HHsearch results for GI: 254780355 and protein with PDBid: 3hwk_A
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=819.31 Aligned_cols=403 Identities=27% Similarity=0.440 Sum_probs=362.7
Q ss_pred CCCCEEEEEECC-EEEEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHHH
Q ss_conf 998769999899-8999752307778751010011558618988887862387875654334477789899319999750
Q gi|254780355|r 1 MTDKFAKLHLGH-EEIDLPIKEGSLGSSVLDISFLHKNGIFTYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEK 79 (429)
Q Consensus 1 M~~~~~~l~~~~-~~~~lpi~~~~~~~~~~d~~~l~~~G~~~~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~~ 79 (429)
|.+-++++..-| -+..|++-++....+.+......++. .+.||+.++.++||+||+|||++|+|+||||||+||+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~GL~Gv~v~eT~Is~Vdg~~G~L~YRGy~i~dLa~~ 86 (414)
T 3hwk_A 9 MGTLEAQTQGPGSMTGPLAAARSVAATKSMTAPTVDERP--DIKKGLAGVVVDTTAISKVVPQTNSLTYRGYPVQDLAAR 86 (414)
T ss_dssp -----------------------------------------CCCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHH
T ss_pred CCCHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC--CCCCCCCCCEEEEEECCCEECCCCEEEECCEEHHHHHHC
T ss_conf 665566524888877501321562312466898756678--899999997670425720778998899978439999755
Q ss_pred CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 89899999998187999899999999886406899899999985124765257899999998752068557678788988
Q gi|254780355|r 80 SDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVN 159 (429)
Q Consensus 80 ~sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~~ 159 (429)
++||||+||||+|+|||++|+++|+.++..++.+|+++.++++.+|+++|||++|++++++++++++... +.+...+
T Consensus 87 ~sFEEVa~LL~~G~LPt~~el~~f~~~l~~~r~lp~~v~~~l~~~p~~~~pm~~L~~~lsal~~~~~~~~---~~~~~~~ 163 (414)
T 3hwk_A 87 CSFEQVAFLLWRGELPTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDED---DAAANRA 163 (414)
T ss_dssp CCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHHHHTCTTTT---CGGGHHH
T ss_pred CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC---CHHHHHH
T ss_conf 9999999999788796999999999999980789899999998488656707899999998663034434---5156799
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHH
Q ss_conf 89999999999999999972798534888642468877876428984101479699999875635013678763015555
Q gi|254780355|r 160 VSLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVR 239 (429)
Q Consensus 160 ~a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~Ml~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~R 239 (429)
.+++++|++|+|++++||++.|.+++.|+++++|++||++|+++. ++++..+++||++||||||||+|+||||+|
T Consensus 164 ~al~l~A~~p~i~a~~~~~~~g~~~~~p~~~ls~a~n~l~m~~g~-----~p~~~~~~~ld~~LVl~aDHg~naSTfaaR 238 (414)
T 3hwk_A 164 KAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNFLHMCFGE-----VPETAVVSAFEQSMILYAEHGFNASTFAAR 238 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHHSS-----CCCHHHHHHHHHHHHHTSCCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC-----CCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 999999886148999999864999878853235799999873589-----996789999999987825578871367888
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHH
Q ss_conf 44205654246776755421002220352899999862155351279999998214786143027743555540346899
Q gi|254780355|r 240 LAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGSLERIPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMR 319 (429)
Q Consensus 240 ~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~~~~v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l~ 319 (429)
+++||++|+|+|++|||++|+||+|||||++|++|+++|++++++++||++.+++++ |||||||||||+.|||+.+++
T Consensus 239 vvaSt~ad~ysav~aal~al~GplHGgA~~~~~~~l~ei~~~~~~~~~i~~~l~~~~--~ipGFGH~vy~~~DPRa~~l~ 316 (414)
T 3hwk_A 239 VVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIEIGDPANAREWLRAKLARKE--KIMGFGHRVYRHGDSRVPTMK 316 (414)
T ss_dssp HHHTTTCCHHHHHHHHHHHHTSTTTTHHHHHHHHHHHHHCSGGGHHHHHHHHHHTTC--CCTTBCCSSCSSCCTTHHHHH
T ss_pred HHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC--CCCCCCCHHCCCCCCHHHHHH
T ss_conf 886047880344444444036886545078999999985665258999999986699--777889400268997179999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999888608776517999999999996115314579877844788999998499966858999999998999999999
Q gi|254780355|r 320 ETMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEM 399 (429)
Q Consensus 320 ~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~~~~~r~l~pNvDfysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~Eq 399 (429)
++++++.+..+ .+++++++.++++ +++..|+++||||||+|++|+.||||+++||+||++||++||+|||+||
T Consensus 317 ~~~~~l~~~~~--~~~~~~~~~~i~~-----~~~~~k~l~pNvD~~~a~l~~~lGip~~~~t~lF~isR~~Gw~AH~~Eq 389 (414)
T 3hwk_A 317 RALERVGTVRD--GQRWLDIYQVLAA-----EMASATGILPNLDFPTGPAYYLMGFDIASFTPIFVMSRITGWTAHIMEQ 389 (414)
T ss_dssp HHHHHHHHHTT--CHHHHHHHHHHHH-----HHHHHHCCCBCTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCC--CHHHHHHHHHHHH-----HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998763024--0579999999999-----9998559997618899999999595977762999999999999999998
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 70789830045621058876870685
Q gi|254780355|r 400 IVDPSRRIGRPRQLYTGALKRDYVPL 425 (429)
Q Consensus 400 ~~~~~~ri~RP~~~Y~G~~~r~y~pi 425 (429)
+++ +|||||+++|||+.+| |+|-
T Consensus 390 ~~~--~~liRP~a~YvG~~~R-~~P~ 412 (414)
T 3hwk_A 390 ATA--NALIRPLSAYCGHEQR-VLPG 412 (414)
T ss_dssp HHS--CCCCCCEEEECSCCCC-CCTT
T ss_pred HHC--CCCCCCCCEEECCCCC-CCCC
T ss_conf 207--9975868344488999-9999