RPSBLAST alignment of GI: 254780355 and protein with PDBid: 1a59

 Score =  291 bits (744), Expect = 3e-79
 Identities = 111/389 (28%), Positives = 179/389 (46%), Gaps = 22/389 (5%)

Query: 41  TYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQ 100
           T     +   +  + I+ ++ +   LLYRGYP+++L+ K  F +V YLL + EL N S+ 
Sbjct: 4   TIHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKCSFEQVAYLLWNSELPNDSEL 63

Query: 101 KDFNDKISRHALLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNV 160
           K F +    H  L+EN+        ++ HPM +  +AV       ++ +     E  +  
Sbjct: 64  KAFVNFERSHRKLDENVKGAIDLLSTACHPMDVARTAVSV-LGANHARAQDSSPEANLEK 122

Query: 161 SLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMN 220
           ++ ++A   ++ A   +   G+  + PR DLDY++NFL M F          P +  A N
Sbjct: 123 AMSLLATFPSVVAYDQRRRRGEELIEPREDLDYSANFLWMTFGEEA-----APEVVEAFN 177

Query: 221 RIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGS 280
              IL+A+H  NAST T R+  S+ AD  + +   +  L G  HGGANE  ++   EIG 
Sbjct: 178 VSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGI 237

Query: 281 LER-------IPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFN 333
            +                       ++MGFGHRVY+N D R   M+  +  ++       
Sbjct: 238 RKDESLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMI--KHYDR 295

Query: 334 DPIAQVAIELERIALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWV 393
             +  +   LE    E      +++ PN+D+ +G T   +GF T +FT LF  AR  GW 
Sbjct: 296 PEMLGLYNGLEAAMEE-----AKQIKPNLDYPAGPTYNLMGFDTEMFTPLFIAARITGWT 350

Query: 394 SQWTEMIVDPSRRIGRPRQLYTGALKRDY 422
           +   E + D    + RP   Y G  +R  
Sbjct: 351 AHIMEQVADN--ALIRPLSEYNGPEQRQV 377