RPSBLAST alignment of GI: 254780355 and protein with PDBid: 1k3p
>1k3p_A Type II citrate synthase; lyase; 2.20A {Escherichia coli} SCOP: a.103.1.1 PDB: 1owb_A* 1owc_A 1nxe_A 1nxg_A* Length = 426
Score = 488 bits (1258), Expect = e-139
Identities = 247/427 (57%), Positives = 320/427 (74%), Gaps = 3/427 (0%)
Query: 3 DKFAKLHL-GHEEIDLPIKEGSLGSSVLDISFLHKNGIFTYDPAFSSTASCKSKITFIDG 61
D AKL L G ++L + +G+LG V+DI L G+FT+DP F+STASC+SKITFIDG
Sbjct: 2 DTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFIDG 61
Query: 62 NNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRFF 121
+ GILL+RG+PI+QL+ S++LEVCY+LL+GE Q +F ++RH +++E ++R F
Sbjct: 62 DEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLF 121
Query: 122 MGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNVSLRMIAKISTIAAMIYKYSIG 181
F +HPMA++ GAL++FY+ V + + R+++K+ T+AAM YKYSIG
Sbjct: 122 HAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYSIG 181
Query: 182 QPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVRLA 241
QPFVYPR+DL YA NFL+M FS PC Y+VNP+L RAM+RI ILHADHEQNASTSTVR A
Sbjct: 182 QPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRTA 241
Query: 242 GSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGSLERIPHYIMRAKDKNDPFRIM 301
GSSGA+PFACIAAG+A L G AHGGANE AL ML EI S++ IP + RAKDKND FR+M
Sbjct: 242 GSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFFRRAKDKNDSFRLM 301
Query: 302 GFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLYPN 361
GFGHRVY+N+DPR +MRET +EVL+ G D + +VA+ELE IAL D YFIE+KLYPN
Sbjct: 302 GFGHRVYKNYDPRATVMRETCHEVLKELGT-KDDLLEVAMELENIALNDPYFIEKKLYPN 360
Query: 362 VDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRD 421
VDFYSGI L+A+G P+++FTV+FA+ART GW++ W+EM D +I RPRQLYTG KRD
Sbjct: 361 VDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGM-KIARPRQLYTGYEKRD 419
Query: 422 YVPLEER 428
+ +R
Sbjct: 420 FKSDIKR 426