RPSBLAST alignment of GI: 254780355 and protein with PDBid: 2ibp

 Score =  349 bits (896), Expect = 7e-97
 Identities = 133/388 (34%), Positives = 205/388 (52%), Gaps = 21/388 (5%)

Query: 52  CKSKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQKDFNDKISRHA 111
             + I+ IDG  GIL YRGY IE+L+  S + EV YL+L+G L    + +D+ +++ ++ 
Sbjct: 32  KSTSISDIDGEKGILWYRGYRIEELARLSTYEEVSYLILYGRLPTKRELEDYINRMKKYR 91

Query: 112 LLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFY-----------YSPSGVQDLEQCVNV 160
            L+            +    A+  +AV A  ++                  ++ E    +
Sbjct: 92  ELHPATVEVIRNLAKAHPMFALE-AAVAAEGAYDEDNQKLIEALSVGRYKAEEKELAYRI 150

Query: 161 SLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMN 220
           + +++AK+ TI A  Y++S G   V PR DL +A+NFL+M F       + +PL +R ++
Sbjct: 151 AEKLVAKMPTIVAYHYRFSRGLEVVRPRDDLGHAANFLYMMFG-----REPDPLASRGID 205

Query: 221 RIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGS 280
              ILHADHE  AST    +  S+ +D ++ +AA +A L G  HGGANE A+   +EIG+
Sbjct: 206 LYLILHADHEVPASTFAAHVVASTLSDLYSSVAAAIAALKGPLHGGANEMAVRNYLEIGT 265

Query: 281 LERIPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVA 340
             +    I+ A  K    ++MG GHRVY+ +DPR +I +E   +           +  +A
Sbjct: 266 PAKAKE-IVEAATKPGGPKLMGVGHRVYKAYDPRAKIFKEFSRDY-VAKFGDPQNLFAIA 323

Query: 341 IELERIALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMI 400
             +E+  L   YF +RKLYPNVDF+SGI    +G P   FT +FA++R  GWV+   E  
Sbjct: 324 SAIEQEVLSHPYFQQRKLYPNVDFWSGIAFYYMGIPYEYFTPIFAMSRVVGWVAHVLEYW 383

Query: 401 VDPSRRIGRPRQLYTGALKRDYVPLEER 428
            +   RI RPR  Y G     Y+PLE+R
Sbjct: 384 ENN--RIFRPRACYIGPHDLQYIPLEQR 409