RPSBLAST alignment of GI: 254780355 and protein with PDBid: 3hwk
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis} Length = 414
Score = 383 bits (984), Expect = e-107
Identities = 104/369 (28%), Positives = 167/369 (45%), Gaps = 19/369 (5%)
Query: 54 SKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQKDFNDKISRHALL 113
+ I+ + L YRGYP++ L+ + F +V +LL GEL ++ F+ + +
Sbjct: 61 TAISKVVPQTNSLTYRGYPVQDLAARCSFEQVAFLLWRGELPTDAELALFSQRERASRRV 120
Query: 114 NENMSRFFMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNVSLRMIAKISTIAA 173
+ +M P + HPM ++ +A+ L + D ++RM+A + TI A
Sbjct: 121 DRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDE---DDAAANRAKAMRMMAVLPTIVA 177
Query: 174 MIYKYSIGQPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMNRIFILHADHEQNA 233
+ + G P + P S L YA NFLHMCF + A + IL+A+H NA
Sbjct: 178 IDMRRRRGLPPIAPHSGLGYAQNFLHMCFGEVP-----ETAVVSAFEQSMILYAEHGFNA 232
Query: 234 STSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGSLERIPHYIMRAKD 293
ST R+ S+ +D ++ + + L GR HGGANE ++ ++EIG ++
Sbjct: 233 STFAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIEIGDPANAREWLRAKLA 292
Query: 294 KNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIALEDEYF 353
+ + +IMGFGHRVYR+ D R M+ + V V + L E
Sbjct: 293 RKE--KIMGFGHRVYRHGDSRVPTMKRALERVGTVRD--GQRWLDIY-----QVLAAEMA 343
Query: 354 IERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQL 413
+ PN+DF +G +GF FT +F ++R GW + E + RP
Sbjct: 344 SATGILPNLDFPTGPAYYLMGFDIASFTPIFVMSRITGWTAHIMEQATAN--ALIRPLSA 401
Query: 414 YTGALKRDY 422
Y G +R
Sbjct: 402 YCGHEQRVL 410