BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780357|ref|YP_003064770.1| hypothetical protein
CLIBASIA_01210 [Candidatus Liberibacter asiaticus str. psy62]
(394 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780357|ref|YP_003064770.1| hypothetical protein CLIBASIA_01210 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040034|gb|ACT56830.1| hypothetical protein CLIBASIA_01210 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 394
Score = 359 bits (920), Expect = 6e-97, Method: Composition-based stats.
Identities = 394/394 (100%), Positives = 394/394 (100%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY
Sbjct: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP
Sbjct: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF
Sbjct: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL
Sbjct: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS
Sbjct: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL
Sbjct: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI
Sbjct: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
>gi|15965263|ref|NP_385616.1| hypothetical protein SMc02086 [Sinorhizobium meliloti 1021]
gi|307309286|ref|ZP_07588954.1| ComEC/Rec2-related protein [Sinorhizobium meliloti BL225C]
gi|15074443|emb|CAC46089.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306900287|gb|EFN30904.1| ComEC/Rec2-related protein [Sinorhizobium meliloti BL225C]
Length = 801
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 92/393 (23%), Positives = 168/393 (42%), Gaps = 11/393 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PS A PG F +F++ ++ + +
Sbjct: 403 LFFDRVSISLRNVALAALVILAWTPSAAAGPG-FQMSFAATLALVAGYSRWRDHRRKDRE 461
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + G + +++ HF+ +P YGL AN+L P+
Sbjct: 462 TPRNRGGAGVVSGLAIGTVATSVI------GGLATAVYAAAHFNRLPGYGLAANVLTTPL 515
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +++P L A+LLM L+ P VM GLD ++ +A ++ E+ GR+ + F
Sbjct: 516 ISVLIMPFALFAMLLMPFGLEYYPLVVMGQGLDWMLTVARYVASLDGEWTTGRMGDVQFF 575
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
I +L+ +T + +G+ +I + + + P P + ISE LV L+ + +
Sbjct: 576 LIAFGGILLCVLRTRLALVGAGLIALGVCAIALEPQKERPSIAISEDAQLVGLITADAIA 635
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
+N S PP FIFSQW+ AL H+AP + + L S + F C K +
Sbjct: 636 TNRSRPPEFIFSQWQRALAIAAHKAPVDLA--AEPDTAAGTAAFLTSARAGVFACRKGTG 693
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDI-LITTIRDINTKLCNVSLLITPEILQKQGSL 360
C G R V V+++ + + C D+ ++ + R SL+I+ E L++ G++
Sbjct: 694 CAGRSREGWTVAVIEKAESLSFLCGRVDLVVVASRRPSAGCPPGGSLVISTETLRRTGAV 753
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
EI + + S+ + PW +HR
Sbjct: 754 EIHAEQEQP-GAPPRMRVVSSFSSTERPWQRHR 785
Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L +++ FP TIEG ARLSPPSGPA PGL DF F +Y+KG+ A+GYFY P+
Sbjct: 200 LLARSRHEAFPVGATIEGKARLSPPSGPALPGLNDFAFGAYFKGVGAVGYFYGAPRAPVD 259
Query: 62 SE--------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL- 112
+ S ++ ++++ N IR IG A A+ + I +
Sbjct: 260 AGAVTDRSQASLPAKAAAYLALVREAIGNRIRTAIGGDTGAIAAALVTGEERAISREAVE 319
Query: 113 ------IANILAIPILSFVVIPAGLI----AILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
++++LAI L+ V+ + +L + L + ++ +
Sbjct: 320 MLRAAGLSHVLAISGLNMVLAAGTFLIGARTLLSFVPGLAERYSVKKIAAVGALLMVFFY 379
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
I ++ R ++I++ L ++R++ + I + +
Sbjct: 380 ILISGGAVSALR--SWIMISIMLVALFFDRVSISLRNVALAALVI-LAWTPSAAAGPGFQ 436
Query: 223 LLISEKGNLVA 233
+ + LVA
Sbjct: 437 MSFAATLALVA 447
>gi|227821911|ref|YP_002825881.1| DNA uptake protein [Sinorhizobium fredii NGR234]
gi|227340910|gb|ACP25128.1| DNA uptake protein [Sinorhizobium fredii NGR234]
Length = 815
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 99/401 (24%), Positives = 176/401 (43%), Gaps = 35/401 (8%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I PS A PG F +F++ ++ GY + ++++ ++ +
Sbjct: 412 ALAALIIIAWSPSAVAGPG-FQMSFAATLALVA--GYARWRDHRLRNADAKSSRLGQVSG 468
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + + G + +++ HFH +P YGL+AN+L P++ +++P GL A+
Sbjct: 469 PVVATVATSLI------GGLATAVYAAAHFHRLPAYGLLANVLTTPLIGILIMPFGLFAM 522
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
LLM L++ P VM GLD ++ +A ++ E+ GRI T F + +L+ +
Sbjct: 523 LLMPFGLEHYPLMVMGQGLDWMLGVARYVATLDGEWVTGRIGVTGFFLLAFGGVLLCVLR 582
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T + +G+ +I + + + P + ISE G LV L+ + + +N S PP FIFSQ
Sbjct: 583 TRLAFLGAALILLGGSSIALERQAVRPSITISEDGQLVGLIVGDAIGTNKSRPPEFIFSQ 642
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSM---------------------QPRK 293
W+ AL H AP + N + S +P
Sbjct: 643 WRRALALDSHVAPVETAAGGRSTNDVERRPPRNSAGTQPVDARASAAEAATALTAAKPGN 702
Query: 294 FLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITT-IRDINTKLCNVSLLITPE 352
F C K +CVG R V V+ ++ + C D+LI R + SL++T
Sbjct: 703 FSCRKGEWCVGRSREGWAVAVVDVPEVFAVLCGRVDLLIAATRRTLPACSSGKSLVVTGA 762
Query: 353 ILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
L++ G++EI ++ + I ++ + PW +HR
Sbjct: 763 TLRQTGAIEIY----ADAAAPERMRIVTSFPSTQRPWQRHR 799
Score = 88.7 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 19/247 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L +++PFP + IEG RLSPPSGPA PGL DF F +Y+KG+ A+G+FY P+
Sbjct: 201 LLARSRHEPFPIGSAIEGKVRLSPPSGPALPGLNDFAFDAYFKGVGAVGFFYGAPRRPGE 260
Query: 62 SESHNTWTWK---KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYG 111
+ + + + ++++++++ N IR+ IG A A+ + I
Sbjct: 261 GDGSLSLSLQMAARLAALRETVGNRIRSAIGGDTGAIAAALVTGEERAISRETVETLRAA 320
Query: 112 LIANILAIPILSFVVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
++++LAI L+ V+ + + L+ P A + + I ++
Sbjct: 321 GLSHVLAISGLNMVLAAGTFLIGARTLLSLVPGLAARRPIKKFAAA-GALTMVFLYILIS 379
Query: 167 HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
R ++I++ +L ++R++ + I I + + +
Sbjct: 380 GGAVSALR--SWIMISIMLVAVLFDRVSISLRNVALAALII-IAWSPSAVAGPGFQMSFA 436
Query: 227 EKGNLVA 233
LVA
Sbjct: 437 ATLALVA 443
>gi|307317027|ref|ZP_07596468.1| ComEC/Rec2-related protein [Sinorhizobium meliloti AK83]
gi|306897115|gb|EFN27860.1| ComEC/Rec2-related protein [Sinorhizobium meliloti AK83]
Length = 801
Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 93/393 (23%), Positives = 167/393 (42%), Gaps = 11/393 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PS A PG F +F++ ++ + +
Sbjct: 403 LFFDRVSISLRNVALAALVILAWTPSAAAGPG-FQMSFAATLALVAGYSRWRDHRRKDRE 461
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + G + +++ HF+ +P YGL AN+L P+
Sbjct: 462 TPRNRGGAGVVSGLAIGTVATSVI------GGLATAVYAAAHFNRLPGYGLAANVLTTPL 515
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +++P L A+LLM L+ P VM GLD ++ +A ++ E+ GR+ + F
Sbjct: 516 ISVLIMPFALFAMLLMPFGLEYYPLVVMGQGLDWMLAVARYVASLDGEWTTGRMGDVQFF 575
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
I +L+ +T + +G+ +I + + P P + ISE LV LV + +
Sbjct: 576 LIAFGGILLCVLRTRLALVGAGLIALGASAIVLEPRKERPSIAISEDAQLVGLVAADAIA 635
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
+N S PP FIFSQW+ AL H+AP + + L S + F C K +
Sbjct: 636 TNRSRPPEFIFSQWQRALAIAAHKAPVDLA--AEPDTAAGTSAFLTSARAGVFACRKGTG 693
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDI-LITTIRDINTKLCNVSLLITPEILQKQGSL 360
C G R V V+++ + + C D+ ++ + R SL+I+ E L++ G++
Sbjct: 694 CAGRSREGWTVAVIEKAESLSFLCGRVDLVVVASRRPSAGCPPGGSLVISTETLRRTGAV 753
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
EI + + S+ + PW +HR
Sbjct: 754 EIHAEQEQPGAAP-RMRVVSSFSSTERPWQRHR 785
Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L +++ FP TIEG ARLSPPSGPA PGL DF F +Y+KG+ A+GYFY P+
Sbjct: 200 LLARSRHEAFPVGATIEGKARLSPPSGPALPGLNDFAFGAYFKGVGAVGYFYGAPRAPVD 259
Query: 62 SE--------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL- 112
+ S ++ ++++ N IR IG A A+ + I +
Sbjct: 260 AGAVTDRSQASLPAKAAAYLALVREAIGNRIRTAIGGDTGAIAAALVTGEERAISREAVE 319
Query: 113 ------IANILAIPILSFVVIPAGLI----AILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
++++LAI L+ V+ + +L + L + ++ +
Sbjct: 320 MLRAAGLSHVLAISGLNMVLAAGTFLIGARTLLSFVPGLAERYSVKRIAAVGALLMVFFY 379
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
I ++ R ++I++ L ++R++ + I + +
Sbjct: 380 ILISGGAVSALR--SWIMISIMLVALFFDRVSISLRNVALAALVI-LAWTPSAAAGPGFQ 436
Query: 223 LLISEKGNLVA 233
+ + LVA
Sbjct: 437 MSFAATLALVA 447
>gi|150396364|ref|YP_001326831.1| ComEC/Rec2-like protein [Sinorhizobium medicae WSM419]
gi|150027879|gb|ABR59996.1| ComEC/Rec2-related protein [Sinorhizobium medicae WSM419]
Length = 799
Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats.
Identities = 93/380 (24%), Positives = 172/380 (45%), Gaps = 12/380 (3%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I PS A PG F +F++ ++ + + S S
Sbjct: 415 ALAALIILAWTPSAAAGPG-FQMSFAATLALVAGYARWRDQRRKHRESSGSRPGMGAVSS 473
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + G + +++ HF+ +P YGL+AN+L P+ S +++P L A+
Sbjct: 474 LAVGTVATSLI------GGMATAVYAAAHFNRLPAYGLVANVLTTPLTSVLIMPFALFAM 527
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
LLM L++ P +M GLD ++ +A ++ E+ GR+ + F I + L+ +
Sbjct: 528 LLMPFGLEHYPLVIMGQGLDWMMAVARYVAALDGEWTTGRMADGPFFLIALGGTLLCVLR 587
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T + G+ ++ + + ++ P P ++ISE LV LV + + +N S PP FIFSQ
Sbjct: 588 TRLALGGAGLVALGVCVIALDPREERPSIVISEDAQLVGLVTADAIATNRSRPPEFIFSQ 647
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
W+ AL H P + + +L S + F C K + CVG R V +
Sbjct: 648 WRRALAVSEHAVPLDL--PVYAGSDVDTAALLASAKVGVFTCRKGTGCVGRSREGWTVAI 705
Query: 315 LKRKDMIRLSCQLSDI-LITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
+++ +++ L C +D+ ++ + R + SL+I+ L++ GS+EI +P
Sbjct: 706 VEKAELVPLLCGHADLVVVASRRPVAACPPGASLIISTRTLRRTGSVEIHAVPE--QAGS 763
Query: 374 VKFIIKSAIENLHFPWTKHR 393
+ + + + PW +HR
Sbjct: 764 PRMQVVGSFSSTERPWQRHR 783
Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 22/251 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L +++PF IEG ARLSPPSGPA PGL DF F +Y KG+ A+G+FY P+ +
Sbjct: 199 LLARSRHEPFAIGAIIEGKARLSPPSGPALPGLNDFAFGAYVKGLGAVGFFYGAPRALAG 258
Query: 62 SESHNTW--------TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL- 112
+ S ++ ++++ N IR+ IG A A+ + I +
Sbjct: 259 AASGRDIAETSLGERAAAYLAPVREAIGNRIRSAIGGDTGAIAAALVTGEERAISREAVE 318
Query: 113 ------IANILAIPILSFVVIPAGLI----AILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
++++LAI L+ V+ + +L +I L + ++ +
Sbjct: 319 TLRAAGLSHVLAISGLNMVLAAGTFLIGARTLLSLIPGLAERHSAKKIAAVGALLMVFFY 378
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
I ++ R ++I++ +L ++R++ + I + +
Sbjct: 379 ILISGGAVSAVR--SWIMISIMLVAVLFDRVSISLRNVALAALII-LAWTPSAAAGPGFQ 435
Query: 223 LLISEKGNLVA 233
+ + LVA
Sbjct: 436 MSFAATLALVA 446
>gi|86357548|ref|YP_469440.1| hypothetical protein RHE_CH01927 [Rhizobium etli CFN 42]
gi|86281650|gb|ABC90713.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 848
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 113/407 (27%), Positives = 192/407 (47%), Gaps = 27/407 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + PS P F +F++ +S + P +
Sbjct: 432 VFFDRPSISLRNVALSALVIIAISPSEVLGPS-FQMSFAATLALVSVYQLWKDRP--VRQ 488
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + ++ + F ++ G S ++F I+HFH + YGL AN+ +PI
Sbjct: 489 NALLKMPALRPVVAVVRFFGGVFLTSL--IGGFSTALFSIEHFHRLTAYGLPANLATMPI 546
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+SF+V+PAGL+A+LLM LD +P+ V+ +GLD++I +A IS IGR+P F
Sbjct: 547 ISFIVMPAGLLAMLLMPFGLDTLPWKVVGFGLDLVIAVAKTISGWGGNIDIGRLPGWYFS 606
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
V FLLM +T +RH+G+ +I ++ + + P S P L+ISE G LVA+V L
Sbjct: 607 VAVAGFLLMSLLRTRLRHVGTALIAVSTVTVLVLPASRPPHLVISEDGALVAVVATAALA 666
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL---------------QEKNQSSLKEIL 286
SN P FIFSQW+ AL+ P H P + Q + + +++
Sbjct: 667 SNRERPSDFIFSQWQRALVLPTHHPPKMLDGPAVPEEKDRRLRLSREQQNEARIAIRTAA 726
Query: 287 RSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVS 346
+ +F C+KK++C + +V V++ + +C DI++T++R + +
Sbjct: 727 AEGEAERFSCVKKAWCTARLANGHVVTVIENAAYLGPACDAGDIVVTSVRLRFASCRSGA 786
Query: 347 LLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
L T E L++ GSLE+ + +A + L PW +HR
Sbjct: 787 ALFTGETLRRTGSLELRFADSG-------LEVTTAFDALSRPWKRHR 826
Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 97/246 (39%), Gaps = 26/246 (10%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
PF I G ARL+PP+GPA P L DF+F +Y+ GI A G+FY P +
Sbjct: 238 APFEIGDIITGRARLTPPAGPALPALNDFSFGAYFDGIGANGFFYGAPTKLDPQVEPPGA 297
Query: 69 TW------KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIAN 115
W +++ ++ + IR+ + A A+ + I +A+
Sbjct: 298 RWTSDALLERLYRLRSGIGDRIRSILPGDTGAFAAALVTDERRAISNETTEALRQSGLAH 357
Query: 116 ILAIPILSFVVIPAGLIAILLMILSL------DNIPFGVMAWGLDIIIHIAHRISVAHNE 169
I+AI L+ + M+LSL + A G +I ++ ++
Sbjct: 358 IIAISGLNMALSAGIFFVGFRMLLSLFPGVAQAHPTKKFAAAG--ALIAVSAYFLISGFA 415
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF-TFPYSFSPDLLISEK 228
R +F+ + + + + F + +I + + II + + S + +
Sbjct: 416 VSAER----AFIMMAIMLVAVFFDRPSISLRNVALSALVIIAISPSEVLGPSFQMSFAAT 471
Query: 229 GNLVAL 234
LV++
Sbjct: 472 LALVSV 477
>gi|327189235|gb|EGE56414.1| hypothetical protein RHECNPAF_70025 [Rhizobium etli CNPAF512]
Length = 820
Score = 238 bits (608), Expect = 9e-61, Method: Composition-based stats.
Identities = 113/392 (28%), Positives = 193/392 (49%), Gaps = 28/392 (7%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
+ PS P F +F++ +S GY + I + + ++++
Sbjct: 419 ALVIIAISPSEVLGPS-FQMSFAATLALVS--GYQLWKDRRIRENPLLKLPVLRPVAAVA 475
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
F ++ G S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM
Sbjct: 476 GFFGGVFLTSL--IGGFSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLM 533
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
LD + V+ +GLD++I +A +S + GR+P FV V FLL+ +T +
Sbjct: 534 PFGLDAPLWTVVGFGLDLVIAVAKTVSGWGGDIGFGRLPGWYFVVAVAGFLLLTLLRTRL 593
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
R G+ ++ + +IL P S PDL+ISE G LV LV + SN NPP FIF QW+
Sbjct: 594 RQAGTSILAVATLILLILPGSRPPDLVISEDGGLVGLVAATAMASNRENPPDFIFDQWQR 653
Query: 258 ALITPFHEAPHVQK----------------EDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
AL+ P H P + D Q + ++++ + +F C+KK++
Sbjct: 654 ALVLPTHHPPKMLDGPAIPPQGEDRRVKLSRDQQNEARTAMVAAAAGGEANRFSCVKKAW 713
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
C+ + +V V+ + +C++ +I++T++R + + + L T E L++ GS+E
Sbjct: 714 CIARLGNGHVVAVIDNAAYLGPACEVGEIVVTSVRLRFDRCRSGATLFTGETLRRTGSVE 773
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ I +A + L PW +HR
Sbjct: 774 LRFAQTG-------LEIATAFDALSRPWMRHR 798
Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 24/242 (9%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM------IYSSE 63
PF I G ARL+PP+GPA PGL DF+F +Y+ GI A G+FY P+ +
Sbjct: 210 PFEIGDIITGRARLTPPAGPALPGLNDFSFGAYFDGIGANGFFYGAPEKVDLQAGPPAVT 269
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANI 116
S + + + ++ + IR+ + A A+ + I +A+I
Sbjct: 270 STSDALLEWLYRLRSGIGDRIRSILPGDTGAFAAALVTDERRAISKETTEALRQSGLAHI 329
Query: 117 LAIPILSFVVIPAGLIAILLMILSL-----DNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
+AI L+ + M+LSL P +A +I A+ +
Sbjct: 330 VAISGLNMALSAGIFFVGFRMLLSLFPGVAQAYPTKKIAAAGALIAVTAYFLIS-----G 384
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF-TFPYSFSPDLLISEKGN 230
G E +F+ + + + + F + +I ++ + II + + S + +
Sbjct: 385 FGVSAERAFIMMAIMLIAVFFDRPSISLRNVVLSALVIIAISPSEVLGPSFQMSFAATLA 444
Query: 231 LV 232
LV
Sbjct: 445 LV 446
>gi|190891621|ref|YP_001978163.1| hypothetical protein RHECIAT_CH0002024 [Rhizobium etli CIAT 652]
gi|190696900|gb|ACE90985.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 820
Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 114/392 (29%), Positives = 195/392 (49%), Gaps = 28/392 (7%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
+ PS P F +F++ +S GY + I + + ++++
Sbjct: 419 ALVIIAISPSEVLGPS-FQMSFAATSALVS--GYQLWKDRRIRENPLLKLPLLRPVAAVA 475
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
F ++ G S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM
Sbjct: 476 GFFGGVFLTSL--IGGFSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLM 533
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
LD + V+ +GLD++I +A +S + GR+P FV V FLL+ +T +
Sbjct: 534 PFGLDAPLWTVVGFGLDLVIAVAKTVSGWGGDIGFGRLPGWYFVVAVAGFLLLTLLRTRL 593
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
RH G+ ++ + +IL P S PDL+ISE G LV LV + SN NPP FIF QW+
Sbjct: 594 RHAGTSILAVATLILLILPGSPPPDLVISEDGGLVGLVAATAMASNRENPPDFIFDQWQR 653
Query: 258 ALITPFHEAPHVQK----------------EDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
AL+ P H P + D Q + ++++ + +F C+KK++
Sbjct: 654 ALVLPTHHPPKMLDGPAIPPQGEDRRVKLSRDQQNEARTAMVAAAAGGEANRFSCVKKAW 713
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
C+ + +V V+ + +C +I++T++R + + + L T E L++ GS+E
Sbjct: 714 CIARLGNGNVVAVIDNAAYLGPACDAGEIVVTSVRLRFDRCRSGATLFTGETLRRTGSVE 773
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ + ++ I +A + L PW +HR
Sbjct: 774 LRFVQTGHE-------IATAFDALSRPWMRHR 798
Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 24/242 (9%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM------IYSSE 63
PF I G ARL+PP+GPA PGL DF+F +Y+ GI A G+FY P+ +
Sbjct: 210 PFEIGDIITGRARLTPPAGPALPGLNDFSFGAYFDGIGANGFFYRAPEKVDLQAGPPAVT 269
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANI 116
S + + + ++ + IR+ + A A+ + I +A+I
Sbjct: 270 STSDALLEWLYRLRSGIGDRIRSMLPGDTGAFAAALVTDERRAISKETTEALRQSGLAHI 329
Query: 117 LAIPILSFVVIPAGLIAILLMILSL-----DNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
+AI L+ + M+LSL P +A +I A+ +
Sbjct: 330 VAISGLNMALSAGIFFVGFRMLLSLFPGVAQAYPTKKIAAAGALIAVTAYFLIS-----G 384
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF-TFPYSFSPDLLISEKGN 230
G E +F+ + + + + F + +I ++ + II + + S + +
Sbjct: 385 FGVSAERAFIMMAIMLIAVFFDRPSISLRNVVLSALVIIAISPSEVLGPSFQMSFAATSA 444
Query: 231 LV 232
LV
Sbjct: 445 LV 446
>gi|218463027|ref|ZP_03503118.1| hypothetical protein RetlK5_27913 [Rhizobium etli Kim 5]
Length = 527
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 111/392 (28%), Positives = 193/392 (49%), Gaps = 28/392 (7%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
+ PS P F +F++ +S GY + + + + + ++
Sbjct: 126 ALVIIAISPSEVLGPS-FQMSFAATLALVS--GYQLWKERRVRENPLLKLPVLRLVVAVA 182
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
F ++ G S ++F ++HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM
Sbjct: 183 GFFGGVFLTSL--IGGFSTALFAVEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLM 240
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
LD + V+ +GLD++I +A +S + +GR+P F V FLL+ +T +
Sbjct: 241 PFGLDAPLWTVVGFGLDLVIAVAKTVSAWGGDIDLGRLPAWYFAVAVAGFLLLTLLRTRL 300
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
RH G+ ++ ++ +I+ P S PDL+ISE G LVALV + SN NPP FIF QW+
Sbjct: 301 RHAGTSILAVSTLIVLILPGSRPPDLVISEDGGLVALVATAAMASNRENPPDFIFDQWQR 360
Query: 258 ALITPFHEAP----------------HVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
AL+ P H P D Q + ++++ + +F C+KK++
Sbjct: 361 ALVLPTHHPPKMLDGPAIPPQGEDRRLRLSRDQQNEARTAMMAAAAGGEANRFSCVKKAW 420
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
C+ + +V V+ + +C S+I++T +R + + + L T E L++ GS+E
Sbjct: 421 CIARLGNGHVVAVIDNAAYLGPACDASEIVVTAVRLRFDRCHSGATLFTGETLRRTGSVE 480
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ + + +A + L PW +HR
Sbjct: 481 LRFAQTGPE-------VATAFDTLSRPWMRHR 505
>gi|209549196|ref|YP_002281113.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534952|gb|ACI54887.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 810
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 108/392 (27%), Positives = 185/392 (47%), Gaps = 28/392 (7%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
+ PS P F +F++ +S GY + I + ++ + ++
Sbjct: 409 ALVIIAISPSEVLGPS-FQMSFAATLALVS--GYQLWKDRRIRENAWLKLPVFRPVVAVA 465
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
F ++ G S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM
Sbjct: 466 GFFGGVFLTSL--IGGFSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLM 523
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
LD + V+ +GLD++I +A +S + +GR+P F V FLL+ +T +
Sbjct: 524 PFGLDTPLWKVVGFGLDLVIAVAKTVSGWGGDIGVGRLPAWYFAVAVAGFLLLTLLRTRL 583
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
RH G+ ++ ++ +++ P PDL+ISE G LVALV+ + SN NPP FIF QW+
Sbjct: 584 RHAGTSILAVSTLLVLILPVPRPPDLVISEDGGLVALVETAAMASNRENPPDFIFDQWQR 643
Query: 258 ALITPFHEAPHVQKEDLQEKNQSSLK----------------EILRSMQPRKFLCIKKSF 301
AL+ P H P + + + +F C+KK++
Sbjct: 644 ALVLPTHHPPKMLDGPAIPPGGEDRRVRLSREQQNEARTAMRAAAAGGETNRFSCVKKAW 703
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
C + +V ++ + +C +DI++T +R + + L T E L++ GS+E
Sbjct: 704 CTSRLGNGRVVTIIDNAAYLGPACDSADIVVTPVRLRFNSCRSGATLFTGETLRRTGSVE 763
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ + +A E L PW + R
Sbjct: 764 LRFADAG-------LEVATAFETLSRPWMRQR 788
Score = 77.5 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 24/242 (9%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM------IYSSE 63
PF + G ARL+PP+GPA P L DF+FS+Y+ GI A G+FY P+ +
Sbjct: 200 PFEIGDIVTGRARLTPPAGPALPELNDFSFSAYFDGIGANGFFYGAPERVDLQAGPQPAR 259
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANI 116
S + + + ++ + IR+ + A A+ + I +A+I
Sbjct: 260 STSETMLEWLYQLRSRIGDRIRSILPGDTGAFAAALVTDERRAISNATTEALRQSGLAHI 319
Query: 117 LAIPILSFVVIPAGLIAILLMILSL-----DNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
+AI L+ + M+LSL P +A +I A+ +
Sbjct: 320 VAISGLNMALSAGIFFVGFRMLLSLFPGVAQAYPTKKIAAAGALIAVTAYYLIS-----G 374
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF-TFPYSFSPDLLISEKGN 230
G E +F+ + + + + F + +I ++ + II + + S + +
Sbjct: 375 FGVSAERAFIMMAIMLIAVFFDRPSISLRNVVLSALVIIAISPSEVLGPSFQMSFAATLA 434
Query: 231 LV 232
LV
Sbjct: 435 LV 436
>gi|116251991|ref|YP_767829.1| transmembrane DNA uptake competence-related protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256639|emb|CAK07727.1| putative transmembrane DNA uptake competence-related protein
[Rhizobium leguminosarum bv. viciae 3841]
Length = 830
Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats.
Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 28/408 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + PS P F +F++ +S GY + +
Sbjct: 413 VFFDRPSISLRNVALSALVIIAISPSEVLGPS-FQMSFAATLALVS--GYQLWKDRRVRE 469
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + ++ F ++ G S ++F I+HFH + YGL AN+ +PI
Sbjct: 470 NAFLKLPVIRPFVTVAGFFGGVFLTSL--IGGLSTALFSIEHFHRLTAYGLPANLATMPI 527
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+SF+++PAGL+A+LLM LD +P+ V+ +GLD++I +A +S +GR+P F
Sbjct: 528 ISFIIMPAGLLAMLLMPFGLDVLPWKVVGFGLDLVIAVAKTVSGWDGNIDVGRLPAWYFA 587
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
V FLL+ +T +RH+G+ +I + +IL P PDL+ISE G+LVA+V+ +
Sbjct: 588 VAVAGFLLLTLLRTRLRHVGTSIIAVATLILLLLPGPRPPDLVISEDGSLVAVVEAAAMA 647
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAP----------------HVQKEDLQEKNQSSLKEI 285
SN PP FIF QW+ AL+ P H+ P D Q + +++++
Sbjct: 648 SNRERPPDFIFDQWQRALVLPRHDPPKMLDGPAISPEGEDRRVRLSRDQQNEARTAMRTA 707
Query: 286 LRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNV 345
+ +F C+KK++C+ + +V V+ + +C +DI++T++R +
Sbjct: 708 TAAGDTNRFSCVKKAWCISRLGNGQVVTVIDNAAYLGPACDAADIVVTSVRLRFNSCRSG 767
Query: 346 SLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ L T E L++ GS+E+ + +A + L PW +HR
Sbjct: 768 ATLFTGETLRRTGSIELRFTDTG-------LEVATAFDALSRPWMRHR 808
Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 94/243 (38%), Gaps = 24/243 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM------IYSS 62
F I G ARL+PP+GPA P L DF+F +Y+ GI A G+FY P ++
Sbjct: 219 AAFEIGDIITGRARLTPPAGPALPELNDFSFGAYFDGIGANGFFYGAPTKVDAQVGPQAA 278
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIAN 115
S + + ++ + IR+ + A A+ + I +A+
Sbjct: 279 RSTAETLLEGLYRLRSGIGDRIRSILPGDTGAFAAALVTDERRAISNETTEALRQSGLAH 338
Query: 116 ILAIPILSFVVIPAGLIAILLMILSL-----DNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
I+AI L+ + M+LSL + P +A +I A+ +
Sbjct: 339 IIAISGLNMALSAGIFFVGFRMLLSLIPGIAEAYPTKKIAAAGALIAVTAYFLIS----- 393
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF-TFPYSFSPDLLISEKG 229
E +F+ + + + + F + +I + + II + + S + +
Sbjct: 394 GFAVSAERAFIMMAIMLIAVFFDRPSISLRNVALSALVIIAISPSEVLGPSFQMSFAATL 453
Query: 230 NLV 232
LV
Sbjct: 454 ALV 456
>gi|241204518|ref|YP_002975614.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858408|gb|ACS56075.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 754
Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 113/408 (27%), Positives = 199/408 (48%), Gaps = 28/408 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + L PS P F +F++ +S GY + +
Sbjct: 337 VFFDRPSISLRNVALSALVIILISPSEVLGPS-FQMSFAATLALVS--GYQLWKDRRVRE 393
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + ++ F ++ G S ++F I+HFH + YGL AN+ +PI
Sbjct: 394 NAFLKLPIIRPVVTVAGFFGGVFLTSL--IGGFSTALFSIEHFHRLTAYGLPANLATMPI 451
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+SF+V+PAGL+A+LLM LD +P+ V+ +GLD++I +A +S +GR+P F
Sbjct: 452 ISFIVMPAGLLAMLLMPFGLDVLPWKVVGFGLDLVIAVAKTVSGWDGNIDVGRLPAWYFA 511
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
V FLL+ +T +RHIG+ +I + +IL P PDL+ISE G+LVA+V+ +
Sbjct: 512 VAVAGFLLLTLLRTRLRHIGTSIIAVATLILLLLPVPRPPDLVISEDGSLVAVVEAAAMA 571
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQK----------------EDLQEKNQSSLKEI 285
SN PP FIF QW+ AL+ P H+ P + D Q + +++++
Sbjct: 572 SNRERPPDFIFDQWQRALVLPRHDPPKMLDGPAIPQVGEDRRVKLSRDQQNEARTAMRAA 631
Query: 286 LRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNV 345
+ + +F C+K+++C + +V V+ + +C +DI++T++R +
Sbjct: 632 AAAGEANRFSCVKRAWCASRLGNGRVVAVIDNAAYLGPACDAADIIVTSVRLRFNSCRSG 691
Query: 346 SLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ L T E L++ GS+E+ + +A + L PW +HR
Sbjct: 692 ATLFTGETLRRTGSIELRFADAG-------LEVATAFDALSRPWMRHR 732
Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 95/260 (36%), Gaps = 24/260 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM------IYSS 62
F I G ARL+PP+GPA P L DF+FS+Y+ GI A G+FY P ++
Sbjct: 143 AAFEIGDIITGRARLTPPAGPALPELNDFSFSAYFDGIGANGFFYGAPTKVDAQAGPQAA 202
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIAN 115
S + + ++ + IR+ + A A+ + I +A+
Sbjct: 203 RSAVEALLEGLYRLRSGIGDRIRSILPGDTGAFAAALVTDERRAISDATTEALRQSGLAH 262
Query: 116 ILAIPILSFVVIPAGLIAILLMILSL-----DNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
I+AI L+ + M+LS+ + P +A +I + ++
Sbjct: 263 IIAISGLNMALSAGIFFVGFRMLLSIFAGIAEAYPTKKIAAA-GALIAVTAYFLISGFAV 321
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
R ++ L+ VF + ++ + +IIL + P +S
Sbjct: 322 SAERA-----FIMMAIMLIAVFFDRPSISLRNVALSALVIILISPSEVLGPSFQMSFAAT 376
Query: 231 LVALVDKNTLISNYSNPPSF 250
L + +F
Sbjct: 377 LALVSGYQLWKDRRVRENAF 396
>gi|325292751|ref|YP_004278615.1| ComEC/Rec2-related protein [Agrobacterium sp. H13-3]
gi|325060604|gb|ADY64295.1| ComEC/Rec2-related protein [Agrobacterium sp. H13-3]
Length = 826
Score = 225 bits (574), Expect = 8e-57, Method: Composition-based stats.
Identities = 93/397 (23%), Positives = 169/397 (42%), Gaps = 22/397 (5%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I PS P F +F++ +SA ++ W K++
Sbjct: 409 AISALIILAFSPSEIMGPS-FQMSFAATIALVSAYAFWSRWRTDRERLFIGRKPAWLKVA 467
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + + + G S +I+ +HFH + YGL AN+ A+P++S +V+P L+A+
Sbjct: 468 GMMGAVIGGVITT-SLIGGLSTAIYSAEHFHRVTTYGLFANLAAMPLMSLIVMPFALLAM 526
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
LLM LD +M +G+ ++I +A+ ++ GR V FLL+ +
Sbjct: 527 LLMPFGLDAPFLKIMGYGMALVIEVANEVASWGGSAATGRPHGWFIGLASVGFLLLTLLR 586
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
+ + +G + + Y PDLLI E G LVAL++ + + + P SF++ Q
Sbjct: 587 SRLALLGIPFLLFAFGVSAVTAYRDLPDLLIHEDGELVALLEDGKVSTTKARPQSFVYGQ 646
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSS------------------LKEILRSMQPRKFLC 296
W+ AL+ P P N + + L+ + F C
Sbjct: 647 WQRALLLPEKTVPPGFINGESTANTAGSDSRSKLSPEDMAVVVREMTAALKDAKAGVFTC 706
Query: 297 IKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQK 356
K +CV S + VL+ +C ++DI++ + R ++ + +LL++ +IL++
Sbjct: 707 RKDIWCVASAASGEWIVVLEDGRFAGKACDIADIVVVSRRTSFSQCRSGALLLSRDILRR 766
Query: 357 QGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
GS+EI + +AI PW++HR
Sbjct: 767 LGSVEIDFADKREEGVASGLR--AAIAGTDRPWSQHR 801
Score = 82.5 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/244 (21%), Positives = 97/244 (39%), Gaps = 25/244 (10%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI-------YS 61
+P T+ G RLSPPSGPA PGL DF F+SY+KGI A G+FY P+ +
Sbjct: 201 EPIALGATLRGKVRLSPPSGPALPGLNDFAFTSYFKGIGATGFFYKSPQALVSPVGDARP 260
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIA 114
+ W ++ ++ + IR IG A A+ + I +A
Sbjct: 261 DKGWLEWADMRLYGLRSAIAERIRTTIGGDAGAFAASIITDERQAISAETMEALRLSGLA 320
Query: 115 NILAIPILSFVVIPAGL-----IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+I+AI L+ + +A L P +A +++ +A+ +
Sbjct: 321 HIVAISGLNMALASGIFFVGLRLAFSLFPAFAQRWPVKKIAAFAALLMTLAYYLIS---- 376
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF-TFPYSFSPDLLISEK 228
E +++ + V + ++F + ++ + + I+ + S + +
Sbjct: 377 -GFAVSAERAWLMMSVMLIAVLFDQPSLSLRNVAISALIILAFSPSEIMGPSFQMSFAAT 435
Query: 229 GNLV 232
LV
Sbjct: 436 IALV 439
>gi|159184742|ref|NP_354400.2| hypothetical protein Atu1393 [Agrobacterium tumefaciens str. C58]
gi|159140030|gb|AAK87185.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 809
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 94/397 (23%), Positives = 163/397 (41%), Gaps = 22/397 (5%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+ PS P F +F++ ++A + W ++
Sbjct: 392 ALSALVILALSPSEIMGPS-FQMSFAATIALVAAYAAWSRWRTDRERLFIGRKPAWMTVA 450
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + + G S +I+ ++HF + YGL AN+ A+P++S VV+P GLIA+
Sbjct: 451 GTAGAVIGGVVTT-SLIGGLSTAIYSVEHFQRVTTYGLFANLAAMPLMSLVVMPFGLIAM 509
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
LLM LD VM +G+ ++I +A ++ GR V FLL+ +
Sbjct: 510 LLMPFGLDAPFLKVMGYGMALVIEVAQEVASWGGSAATGRPHGWFIGVASVGFLLLTLLR 569
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T + +G + + + PDLLI E+G LVAL+D+ + + + P FI+ Q
Sbjct: 570 TRLALLGVPPLLLAFGLSGAVAQRSLPDLLIHEEGKLVALLDEGRVYTTKTRPQGFIYEQ 629
Query: 255 WKSALITPFHE------------------APHVQKEDLQEKNQSSLKEILRSMQPRKFLC 296
W+ AL+ P A + + + LR P F C
Sbjct: 630 WQRALLLPEKPLSPVLLKTGVPATTIALSAKSKLAPEDMKAVAREMVTTLRDAAPGVFTC 689
Query: 297 IKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQK 356
+C +S + VL+ +C ++DI+I + R T+ + +LL+ +IL++
Sbjct: 690 RTGIWCAARAKSGEFIIVLEDGRFAGKACDIADIVIVSRRTSFTQCRSGALLLNRDILRR 749
Query: 357 QGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
GS+EI + +A PW+ HR
Sbjct: 750 IGSVEINFAGSDQAGVVGRMRAATA--GTDRPWSDHR 784
Score = 82.5 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 23/250 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L +P TI G ARLS PSGPA PGL DF F+SY+KGI A G+FY P+ + +
Sbjct: 179 LLARGGGEPAALGATIRGKARLSLPSGPALPGLNDFAFASYFKGIGATGFFYKPPQTVTA 238
Query: 62 SE-----SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV------- 109
+ W ++ ++ + IR IG A A+ + I
Sbjct: 239 PDIDAKKDWLEWADMRLYGLRTAIAERIRNTIGGDAGAFAASIVTDERQAISAGTMEALR 298
Query: 110 YGLIANILAIPILSFVVIPAGL-----IAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+A+I+AI L+ + +A L P M+ +++ +A+ +
Sbjct: 299 LSGLAHIVAISGLNMALASGIFFVGLRLAFSLFPAFAQRWPVKKMSAFAALLMTLAYYLI 358
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF-TFPYSFSPDL 223
E +++ V + ++F + ++ + + I+ L + S +
Sbjct: 359 S-----GFAVSAERAWLMTSVMLIAVLFDQPSLSLRNVALSALVILALSPSEIMGPSFQM 413
Query: 224 LISEKGNLVA 233
+ LVA
Sbjct: 414 SFAATIALVA 423
>gi|85716979|ref|ZP_01047942.1| ComEC/Rec2-related protein [Nitrobacter sp. Nb-311A]
gi|85696181|gb|EAQ34076.1| ComEC/Rec2-related protein [Nitrobacter sp. Nb-311A]
Length = 735
Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats.
Identities = 65/399 (16%), Positives = 152/399 (38%), Gaps = 44/399 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F I P P F +F++ ++ + +PKM+ +
Sbjct: 339 IMVDRRAITFRTLAVAAMIVLAMAPESLIHPS-FQMSFAATLGLVALVQV--GMPKMLAT 395
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ T +++ + A + + ++ HFH + YG++AN+LA+P+
Sbjct: 396 PDHSPTAK----AALWGGREIAMLALASFVAGLATTPYVAFHFHRVTPYGMVANLLAMPV 451
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+P GL+ + M D + + +M +G++ ++ +A ++ +
Sbjct: 452 VSALVMPVGLLGLAAMPFGFDGVFWRLMDFGIEWMVAVAQGVTELPGAIGRVSAFGAGPL 511
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ +L+ +T +R G ++ G+ + PD+LIS +G VA+ ++
Sbjct: 512 LAATAGIILLGLLRTPLRWSGVVISGLAVAWSLAA---TPPDILISAEGRNVAVRGEDGR 568
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ + SF +W +A A E +
Sbjct: 569 LRLVSAGKDSFAVREWLAADGDERGPADPALAEGVSC---------------------DD 607
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
CV +V + +R + +R C +++++T + +I L+++G+
Sbjct: 608 EGCVVKLSGGGLVALTRRPEAMRDDCVRAELMVTQWEAPEGC---RAQVIDRNRLRREGA 664
Query: 360 LEITIIPPS--------NDNDKVKFIIKSAIENLHFPWT 390
L + P + + + ++ L PW+
Sbjct: 665 LALWRAPGASGSGVSTDSTSRPRFAVVAVRPAGLERPWS 703
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + +E ARL PP P PG FDF Y+ GI A G+ K +
Sbjct: 143 LSVRKGAAP-AVGSFVELKARLQPPLMPVRPGSFDFARDMYFHGIGASGFVMGAIKTVSP 201
Query: 62 SESHNTWT--WKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ ++ + IR + A A+ L
Sbjct: 202 PSGGGLMLRYATLMQELRDAIDARIRLVLSGDSRAIATALLT 243
>gi|115524577|ref|YP_781488.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisA53]
gi|115518524|gb|ABJ06508.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisA53]
Length = 765
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 65/390 (16%), Positives = 146/390 (37%), Gaps = 42/390 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F I L P P F +F++ ++ + +P + +
Sbjct: 368 VMVDRQAITFRTLAIAALIVLLVAPEALVHPS-FQMSFAATLGLVALVQI--GMPALFAA 424
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ T +++ + I A + + + HFH + YG+IAN+LA+P+
Sbjct: 425 PDHSATAR----AALWGAREIAILALASLVAGLATTPYAAYHFHRVTPYGVIANLLAMPV 480
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAGL+ +L M D + + +M G+D ++ +A ++ I
Sbjct: 481 VSALVMPAGLLGLLAMPFGFDGVFWHIMEVGIDWMVIVAQGVAALPGAVGRIAAFGAGPL 540
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + +++ +T +R+ G +++ +++ P PD+LI+ G VA+ +
Sbjct: 541 LLASLGLIMIGLLRTPLRYAGGLLLVASVLWAIATPQ---PDILIAADGRHVAVRGADAK 597
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ +F+ +W +A + +
Sbjct: 598 LRLLQDGKDAFLVKEWLAADADGRAVGDASLSNGVSC---------------------DE 636
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ CV +V + + + + C+ + +LIT +L I E L+++G+
Sbjct: 637 AACVAALADGRLVSLARWPEAVVEDCEKAAVLITRRPVPEGC---AALAIDAETLRREGA 693
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ V+ PW
Sbjct: 694 KTLRQTEGKWVLRAVRP------AGRDRPW 717
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/246 (19%), Positives = 88/246 (35%), Gaps = 15/246 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS--IPKMI 59
LS+ K P + +E ARL+PP P PG +DF Y++GI A G+ PK
Sbjct: 172 LSVKKGTAP-SVGSFVELKARLTPPLQPLRPGAYDFGRDLYFQGIGATGFVTGAIKPKPA 230
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ + ++ + IR + A A+ L I
Sbjct: 231 PNEPGFALRYAATLQGLRDAIDARIRQTLSGDSRAIATALLTGKRDAITTPVNDAMFVSG 290
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+ ++L+I V+ + + +L+L +P + + + + A + A
Sbjct: 291 LGHVLSISGYHMAVVAGVVFFTVRALLAL--VPVLTVTFPIKKVAAAAALAAAAFYLVLS 348
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS---FSPDLLISEKG 229
G T ++ +L+ + +I+L P + S + +
Sbjct: 349 GAEVATQRSFLMTAVVLIAVMVDRQAITFRTLAIAALIVLLVAPEALVHPSFQMSFAATL 408
Query: 230 NLVALV 235
LVALV
Sbjct: 409 GLVALV 414
>gi|75676033|ref|YP_318454.1| ComEC/Rec2-related protein [Nitrobacter winogradskyi Nb-255]
gi|74420903|gb|ABA05102.1| ComEC/Rec2-related protein [Nitrobacter winogradskyi Nb-255]
Length = 778
Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats.
Identities = 67/392 (17%), Positives = 152/392 (38%), Gaps = 39/392 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F I P P F +F++ ++ + +P+M+ +
Sbjct: 372 IMVDRRAITFRTLAVAAMIVLAIAPESLIHPS-FQMSFAATLGLVALVQV--GMPRMLAT 428
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ T +++ + A + + + HFH + YG+ AN+LA+P+
Sbjct: 429 PDHSPTAK----AALWGGREIAMLALASFVAGLATTPYAAFHFHRVTPYGMAANLLAMPV 484
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAGL+ + M D + + +M +G++ ++ +A + I
Sbjct: 485 ISALVMPAGLLGLAAMPFGFDGVFWRLMDFGIEWMVAVAQGVVELPGSIGRIAAFGTGPL 544
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ +L+ +T +R G+I++G+ I+ PD+LIS +G VA+ +
Sbjct: 545 LAATAGIVLLGLLRTPLRWGGAIVVGLAIVWSLAV---KPPDILISAEGRNVAVRGGDGR 601
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ + SF +W +A E +
Sbjct: 602 LRLISTGKDSFTVREWLAADGDVRGPTDPTLAEGVSC---------------------DD 640
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ CV IV + + + ++ C +++++T + L + +I L+++G+
Sbjct: 641 AGCVVKASGGGIVALTRHPEALQDDCARAELIVTRWQAPEGCLAH---VIDQNRLRREGA 697
Query: 360 LEITIIPPSNDNDKVKFIIK---SAIENLHFP 388
L + P S+ D + + ++ P
Sbjct: 698 LALWRTPNSSRQDASRLDVSRSGASKPGASRP 729
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + +E ARL PP P PG +DF Y++GI A G+ K + S
Sbjct: 176 LSVRKGAAP-AVGSFVELKARLQPPLTPVRPGSYDFARDMYFQGIGASGFVMGAIKTVAS 234
Query: 62 SESHNTWT--WKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + ++ + IR + A A+ L
Sbjct: 235 PPAGGIALRYAALMQELRDAIDARIRLVLSGDSRAIATALLT 276
>gi|148255851|ref|YP_001240436.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. BTAi1]
gi|146408024|gb|ABQ36530.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. BTAi1]
Length = 762
Score = 215 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 69/390 (17%), Positives = 149/390 (38%), Gaps = 42/390 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F I ++ P P F +F++ ++ + + +P++ +
Sbjct: 377 VMVDRRAVTFRTLAVAAMIVLIAAPEALVHPS-FQMSFAATLGLVALVQF--GLPRLFAT 433
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+S T ++ + + + + HFH I YG++AN+ A+P+
Sbjct: 434 PDSSVTERI----ALWGGRELAMLLLASLIAGLATTPYAAFHFHRITPYGVLANLAAMPV 489
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAGL+ +L LD + + +M WG+D +I + ++ +
Sbjct: 490 VSALVMPAGLLGLLAAPFGLDGLCWTLMGWGIDWMIAVTRWVAALPGAVGRVTAFGIGPL 549
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ LL+ +T +R G+++I I I + P PD+LIS G VA+ ++
Sbjct: 550 ILASFGLLLIGLLRTPLRWSGAVLIAIATIWSVSTPQ---PDILISGDGRAVAVRGRDGR 606
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ + F+ +W +A P + + + +
Sbjct: 607 LHVMRTGKDVFVVKEWLAADADPRVPSDPTLGDGVSC---------------------DE 645
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
S CV V + R + + C + +++T+ + + I + LQ+QG+
Sbjct: 646 SGCVMAMADGRFVALTLRPEALADDCTRAALIVTSRAAPAS---CAAAAIDRQRLQQQGA 702
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
L + + + PW
Sbjct: 703 LMLATQGVGFAVKPARAV------GTSRPW 726
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ K P + ++ ARL PP P PG +DF +++GI A G+ +
Sbjct: 181 LAVRKGTAP-DVGSFVQLKARLLPPLAPVRPGSYDFARDMFFQGIGASGFVMGGITTLTP 239
Query: 62 S--ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ ++ + IRA + A A+ L
Sbjct: 240 PQEGGFGLRYGAAMQGLRDAIDARIRARLDGDERAIATALLT 281
>gi|213018700|ref|ZP_03334508.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995651|gb|EEB56291.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 600
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 75/389 (19%), Positives = 139/389 (35%), Gaps = 52/389 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I +KY A + + P PG F +FS+ +++
Sbjct: 258 IERKYRGLIAIAFAASVILIVEPEAILKPG-FQMSFSAVLALVASYQI------------ 304
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
N KI IK I + I S + + I +F+ + G+I N++AIPI++
Sbjct: 305 --NANKLFKIKIIKYFVSIMISSVI---ASLATVPYTIYNFNYFSISGIITNLIAIPIVT 359
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSFVT 182
++IP G+I +LL+ L ++ I + +D I+ I + I+ R P +S +
Sbjct: 360 LIIIPLGIIYVLLIPLGIEWIIAPFIERPIDSILCITNAIASLQYLVIPTRTFPGSSIII 419
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
I + L + + N R G I + +F+ +PD+L+S V D N L S
Sbjct: 420 ITLGLLWLCLWERNWRFFGIFFIVLG---IFSSAMYTTPDILVSADNLAVK-EDDNLLYS 475
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+F+ W + + C C
Sbjct: 476 LTRKNRNFVVKTWAKQNGQNQIVNHTKFSNSNK-----------------RLKCND-YGC 517
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+ ++ V + +++ I +C D++I + +I L+ G+ +
Sbjct: 518 IYNKGNNKSVLLAHKREDILENCNNVDLVIQLSKFNYPACNTK--IIKYADLEAYGTHSV 575
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ KV+ + PW K
Sbjct: 576 WLTDSGIKVSKVRS---------NRPWHK 595
>gi|190571303|ref|YP_001975661.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357575|emb|CAQ55014.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 674
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 75/389 (19%), Positives = 139/389 (35%), Gaps = 52/389 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I +KY A + + P PG F +FS+ +++
Sbjct: 332 IERKYRGLIAIAFAASVILIVEPEAILKPG-FQMSFSAVLALVASYQI------------ 378
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
N KI IK I + I S + + I +F+ + G+I N++AIPI++
Sbjct: 379 --NANKLFKIKIIKYFVSIMISSVI---ASLATVPYTIYNFNYFSISGIITNLIAIPIVT 433
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSFVT 182
++IP G+I +LL+ L ++ I + +D I+ I + I+ R P +S +
Sbjct: 434 LIIIPLGIIYVLLIPLGIEWIIAPFIERPIDSILCITNAIASLQYLVIPTRTFPGSSIII 493
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
I + L + + N R G I + +F+ +PD+L+S V D N L S
Sbjct: 494 ITLGLLWLCLWERNWRFFGIFFIVLG---IFSSAMYTTPDILVSADNLAVK-EDDNLLYS 549
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+F+ W + + C C
Sbjct: 550 LTRKNRNFVVKTWAKQNGQNQIVNHTKFSNSNK-----------------RLKCND-YGC 591
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+ ++ V + +++ I +C D++I + +I L+ G+ +
Sbjct: 592 IYNKGNNKSVLLAHKREDILENCNNVDLVIQLSKFNYPACNTK--IIKYADLEAYGTHSV 649
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ KV+ + PW K
Sbjct: 650 WLTDSGIKVSKVRS---------NRPWHK 669
>gi|90423953|ref|YP_532323.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB18]
gi|90105967|gb|ABD88004.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB18]
Length = 774
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 62/391 (15%), Positives = 147/391 (37%), Gaps = 42/391 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F + P P F +F++ ++ + +PK++ S
Sbjct: 376 VMVDRQAITFRTLAVAAMVVLTLSPEALVHPS-FQMSFAATLGLVALVQI--GMPKLLAS 432
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ T +++ + + + + + HFH + YG++AN+LA+P+
Sbjct: 433 PDNSATAR----AALWGAREIMVLGLASLVAGLATTPYAAFHFHRVTPYGVLANLLAMPV 488
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAGL+ + M D + + +M G+D +I +A ++ +
Sbjct: 489 VSALVMPAGLLGLAAMPFGFDGVFWRLMDIGIDWMIVVAEGVAALPGAVGRVAAFGSGPL 548
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + +L+ +T +R G+ ++G+ I P PD+L++ G VA+ +
Sbjct: 549 LASTLGLILLGLLRTPLRLSGAAVLGLAIGWALLTPQ---PDILVAADGRHVAVRGADGR 605
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ +F+ +W +A E +
Sbjct: 606 LRVMQDGKDAFLLKEWLAADADGRAVTDSSLAEGVSC---------------------DA 644
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ CV +V + +R + + C+ +++T + +I + L++QG+
Sbjct: 645 AGCVAPLPDGGLVALARRPEAVAEDCERVRLIVTLRQPPADCAAP---VIDQDSLRRQGA 701
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ V+ + PW+
Sbjct: 702 QILWQTGGRFAAIAVRPR------GVDRPWS 726
Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + +E ARL+PP P PG +DF Y++ I+A G+
Sbjct: 180 LSVKKGTAP-QVGSFVELKARLTPPLQPLRPGAYDFGRDLYFQNIAATGFVMGA-IKPRP 237
Query: 62 SESHNTWTWKK---ISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + ++ + IR + A A+ L
Sbjct: 238 PPGEIGFALRYAATMQGLRDAIDARIRLTLSGDNRAIATALLT 280
>gi|146341051|ref|YP_001206099.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. ORS278]
gi|146193857|emb|CAL77874.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. ORS278]
Length = 767
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 71/390 (18%), Positives = 144/390 (36%), Gaps = 42/390 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F I ++ P P F +F++ ++ + + +PK+ +
Sbjct: 381 VMVDRRAVTFRTLAVAAMIVLIAAPEALVHPS-FQMSFAATLGLVALVQF--GLPKLFAT 437
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+S ++ + + + + HFH I YGL+AN+ A+P+
Sbjct: 438 PDSSTAQRV----ALWGGRELSMLLLASLIAGLATTPYAAFHFHRITPYGLLANLAAMPV 493
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S VV+PAGL+ +L LD + + VM WG+D +I + ++ I
Sbjct: 494 VSAVVMPAGLLGLLFAPFGLDGLWWTVMGWGIDWMIAVTRWVAALPGAVGRITAFGIGPL 553
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ +L+ +T +R G+ ++ I P PD+L+S G VA+ ++ L
Sbjct: 554 IVSSFGLVLIGLLRTPLRWSGAAVLAIAAAWAAATPQ---PDILVSGDGRAVAVRGRDGL 610
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ + F+ +W +A A +
Sbjct: 611 LHVMRNGKDVFVTREWLAADADARLPADSSLGHGVSC---------------------DD 649
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
S CV +V + R D + C + +++T ++ ++ LQ+QG+
Sbjct: 650 SGCVLALADGRLVALTLRADALADDCARAALVVTARAAPSSCAAA---VVDRPRLQQQGA 706
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
L + V+ + PW
Sbjct: 707 LMLVARDKGFAVVPVR------ADGTDRPW 730
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--IYSSE 63
+K + ++ ARL PP P PG +DF +++GI A G+ + +
Sbjct: 188 RKGAAPDVGSFVQLKARLLPPLAPVRPGSYDFARDMFFQGIGASGFVMGAITVVTPPQAA 247
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ ++ IRA + A A+ L
Sbjct: 248 GVGLRYAAAMQDLRDVIDARIRARLAGDERAIATALLT 285
>gi|222148889|ref|YP_002549846.1| hypothetical protein Avi_2562 [Agrobacterium vitis S4]
gi|221735875|gb|ACM36838.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 1007
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 88/392 (22%), Positives = 148/392 (37%), Gaps = 55/392 (14%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ + L PS P L +F++ + I+ + P+M
Sbjct: 414 FFDRPVLSLRNAALAAILVILLSPSQVMGPSL-QMSFAATFALIAGFDLWRQRPRMPPIL 472
Query: 63 ESHNTWT-WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ T K + ++ G S ++F HFH + ++GL AN+LA P+
Sbjct: 473 PAIPALTVLKPLMTLVSGI-----LMTSALGGFSTAMFSAAHFHRVGLHGLEANLLAAPL 527
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +V+PA +I +LLM LD P +M GL+ ++ IA +++ N F GR
Sbjct: 528 MSMLVMPAAMIGVLLMPFGLDQWPIQLMGLGLEGVLMIASKVASWGNGFTFGRFEWWFLP 587
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL- 240
L++ KT +R IG M+ PDL ISE G L AL +
Sbjct: 588 VSATGLLILTLMKTRLRLIGVAMMLTAFGYEAIKTDPPLPDLAISEDGQLFALFRTDDRH 647
Query: 241 ----ISNYSNPPSFIFSQWKSALITPFHEAPHVQK------------------------- 271
+N PPSFIF+QW+S L AP +
Sbjct: 648 LLTIATNKKRPPSFIFNQWRSVLDIADPIAPEILPKLAAVEIETGQQGAGKGEDKARETT 707
Query: 272 ------------------EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG 313
E Q + + + +P F C +FC+ + V
Sbjct: 708 RAGKTKTGGQKVKGREPVEPQQAMAEMTTAKEKADKKPDLFHCRTDAFCLARLSNGWTVS 767
Query: 314 VLKRKDMIRLSCQLSDILITTIRDINTKLCNV 345
+++ +D + +C LSD++++T + +
Sbjct: 768 LVQNRDYNQAACALSDLIVSTEAGRDAECKAP 799
Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK-MIY 60
L K+ PF IEG ARLSPPSGPA PGL DF F+SY+ G AIGYFY PK +
Sbjct: 209 LLARGKHVPFNPGDWIEGRARLSPPSGPALPGLNDFAFASYFAGTGAIGYFYQPPKPFLP 268
Query: 61 SSESHNTWTWKK--------ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP---- 108
E W++ ++ + IRA + A A + +
Sbjct: 269 GPEIAPPDFWERAGIKLDETTQELRNGISDRIRAIVPGDAGAFAVAIVTGERRGLSEEAN 328
Query: 109 ---VYGLIANILAIPILSFVVIPAGLIAILLMILSL 141
+A+I++I L + + +LSL
Sbjct: 329 NDLRVSGLAHIISISGLHMALAGGLFFVGIRRLLSL 364
Score = 43.3 bits (100), Expect = 0.072, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 339 NTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
L ++T L++ G++EIT+ P+ I +A +N + PWT+HR
Sbjct: 914 GPMLSRPPKVLTRNDLRRFGAMEITLGDPATRT----LHIVTAFQNQYRPWTRHR 964
>gi|163731992|ref|ZP_02139438.1| competence protein, putative [Roseobacter litoralis Och 149]
gi|161394290|gb|EDQ18613.1| competence protein, putative [Roseobacter litoralis Och 149]
Length = 690
Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 67/393 (17%), Positives = 129/393 (32%), Gaps = 52/393 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ + I + P PG F +F++ ++ G+ MI
Sbjct: 342 IMVNRRAISLRSVAIAAIIVLVLRPEALLGPG-FQMSFAATTALVAVFGFMRDYKIMIGP 400
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + HF+ I YGLIAN+L++P+
Sbjct: 401 KWVQP---------------VVAVLLASGISGLATAPVGAAHFNTISHYGLIANLLSVPV 445
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SF 180
+ VV+PA ++A+ L L LD + +M GL I+ + ++ P
Sbjct: 446 MGSVVVPAAVLALCLAPLGLDWLGLWIMGVGLRWILEVGAFVAALDGARSYVAGPGAVVL 505
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
I + FL +V + R IG + + I+ + + P LI+E G LV ++ +N
Sbjct: 506 PMIALGFLWLVLWQGRARLIGVVPV---ILAFLLWQGTVRPMGLIAENGTLVGVMTENGR 562
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ FI W + + + +
Sbjct: 563 ALSKPKGAGFIARNWLENDGDATGQVDAAGRWNS------------------------GA 598
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ ++ KR C DIL++++ + + P L+ G++
Sbjct: 599 AGLLPDGGKLMHLSGKRAAAAFEGCGKQDILVSSVELGPSSF--DCDVFDPIRLRSVGAV 656
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
I V+ + WT+ R
Sbjct: 657 AIHHDKAGLRLVSVRDVT------GTRLWTRWR 683
Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 84/237 (35%), Gaps = 22/237 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I LSPP GP PG FDF +++ + A+G Y+ ++ + + +
Sbjct: 161 GMRIMTTGHLSPPGGPVEPGGFDFQRHAWFAQLGAVG--YTRVPILAIAPASEGNAGLAV 218
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVV 126
++ + I + A I L +A++LAI L +
Sbjct: 219 FRVRMAAAEHILNVLPGDTGGFAVAVTTGARSAISQQALDDLRASNLAHLLAISGLHMGL 278
Query: 127 IPAGLIAI------LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ A + + L+ ++L + A G +I + ++++ R +F
Sbjct: 279 LTAFVFGLIRSILALIPPIALRWPTRKLAAGG--ALIVASGYLALSGGNVATER----AF 332
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP-YSFSPDLLISEKGNLVALVD 236
V + V ++ + I + I +++L + + LVA+
Sbjct: 333 VMVAVALCAIMVNRRAISLRSVAIAAIIVLVLRPEALLGPGFQMSFAATTALVAVFG 389
>gi|110680398|ref|YP_683405.1| competence protein, putative [Roseobacter denitrificans OCh 114]
gi|109456514|gb|ABG32719.1| competence protein, putative [Roseobacter denitrificans OCh 114]
Length = 703
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 70/393 (17%), Positives = 131/393 (33%), Gaps = 52/393 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ + I + P PG F +F++ ++ G+ MI
Sbjct: 355 IMVNRRAISLRSVAIAAIIVLVLRPEALLGPG-FQMSFAATTALVAVFGFMRDYKIMIGP 413
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + HF+ I YGLIAN+L++P+
Sbjct: 414 KWVQP---------------VVAVLLASGISGLATAPVGAAHFNTISHYGLIANLLSVPV 458
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS-F 180
+ VV+PA ++A+ L L LD + +M GL I+ + ++ P +
Sbjct: 459 MGSVVVPAAVLALCLAPLGLDWLGLWIMGVGLRWILEVGSFVAGLDGARSYVAGPGAAVL 518
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
I + FL +V + R IG + + + + + + P LI+E G LV L+ ++
Sbjct: 519 PMIALGFLWLVLWQGRARLIGVVPVLLAF---WLWQGTVRPIGLIAENGTLVGLMTEDGR 575
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + FI W +A + D
Sbjct: 576 ALSKAKGAGFIARNWLENDGEAVAQAEAAARWDKSLAG---------------------- 613
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
V ++ KR C DI+++++ T + P L+ G++
Sbjct: 614 --VLPEGGHLVHLSGKRAAAGFDGCDARDIVVSSVELNPTGF--DCDVFDPIRLRGVGAV 669
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
I VK + WT+ R
Sbjct: 670 AIHHDKAGLRLVSVKDLT------GTRLWTRWR 696
>gi|86138838|ref|ZP_01057410.1| competence protein [Roseobacter sp. MED193]
gi|85824485|gb|EAQ44688.1| competence protein [Roseobacter sp. MED193]
Length = 689
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/389 (19%), Positives = 150/389 (38%), Gaps = 54/389 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ A + L P PG F +F++ + G+F + ++ +
Sbjct: 354 DRRALSLRAVAVAATLVLLRRPETLLSPG-FQMSFAATAALVGVFGWFRTRRSLLGPAW- 411
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ + + + A+ + F HF+ + YGLIAN+LA+PI+
Sbjct: 412 -----------LRSVLTVVLSSAV---AGAATAPFGAAHFNVVSHYGLIANVLAVPIMGL 457
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSFVTI 183
VV+PA ++A+ L L + I + GL+ I+ +A +S +P
Sbjct: 458 VVVPAAVLAMCLAPLGGEQIGIFFLQSGLEWILAVAAWVSALPKPQSGVVMPGIWGLPLF 517
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ L ++ + +R G ++IG++ + T+ P LLIS G LV ++ +
Sbjct: 518 TLGALFVLLWQGRLRWAGFLLIGLSSL---TWAQVERPLLLISANGGLVGVLTPQGRALS 574
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+I ++W +A TP + Q + V
Sbjct: 575 REKSQGYIAARWLAADGTPLPQITAAALWHSQID----------------------AGGV 612
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
V+ KR + CQ +D++++ R +L ++ PE L++ GS+ I
Sbjct: 613 WVGGRRVVHITGKRHADVVTDCQPTDLIVSNRRL---ELGGDCEVLGPERLRRSGSIRI- 668
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
D ++ +A + PW++
Sbjct: 669 --------DHDGRMVTAADIAGNRPWSRQ 689
Score = 45.2 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 78/245 (31%), Gaps = 17/245 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ + + A L PP GP+ PG FDF +++ I A GY + ++
Sbjct: 161 LSLAQDSAIPQVGVRLATTAHLMPPQGPSEPGGFDFRRYAWFLKIGANGYTRTPLVVLAP 220
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IA 114
+ + ++ + A+ + + L +A
Sbjct: 221 PRHGL-----YLQRFRYRLSQIVQQRLEPATGGVAAAIIAGDRSGVRPQELQNLRASNLA 275
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++LAI L ++ + +L SL IP + W + I A + G
Sbjct: 276 HLLAISGLHMGLLTGFVFTVLR--FSLCVIPAIALRWNIKKISAGAALVVGLFYLGISGG 333
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP---YSFSPDLLISEKGNL 231
T I+V L + + ++L P S + + L
Sbjct: 334 NVSTERAFIMVLVLFVAVLLDRRALSLRAVAVAATLVLLRRPETLLSPGFQMSFAATAAL 393
Query: 232 VALVD 236
V +
Sbjct: 394 VGVFG 398
>gi|260433607|ref|ZP_05787578.1| competence protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260417435|gb|EEX10694.1| competence protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 678
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 64/385 (16%), Positives = 131/385 (34%), Gaps = 44/385 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ++ A I L P PG F +F++ ++ G +P
Sbjct: 334 IDRRAISLRAVAVAALIVLLLRPESVLSPG-FQMSFAATTALVAVFGALRDMPAFPGP-- 390
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + + + + HF+ + YGL+AN+L +PI+
Sbjct: 391 -------RWLRAFGGVLAS------SAIAGLATAPIGAAHFNMVSHYGLVANVLTVPIMG 437
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSFVT 182
+V+PA + A LL + L+ + VM +GL I+ ++ +S P T
Sbjct: 438 MLVVPAAVFAALLAPIGLEALAIHVMGFGLRWILFVSDWVSGLDGARGFVADPSDFVLPT 497
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + V + IR G++ + ++ L + P++LI++ G LV ++ ++
Sbjct: 498 FALGAVFAVLWQGRIRWFGAV---VALVALILWGQGDRPEVLIADTGALVGVMTEHGRAL 554
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ FI S W + +
Sbjct: 555 SKKKGAGFIASVWLENDGDSASQEQAASRWPG----------------------ATGLVR 592
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
V +V V ++ + + ++ + + KL L+ P+ L GS+ +
Sbjct: 593 VFPMDGYEVVHVTGKRAAKTVKGCSAKQIVAS--PVPLKLHGDCLVFDPDDLPLTGSVAL 650
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHF 387
+ + N + S E
Sbjct: 651 SGGKIVSSNAIGGQRLWSPAEGNRR 675
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/257 (17%), Positives = 92/257 (35%), Gaps = 22/257 (8%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I A LSPP GP PG FDF ++++ + A+GY ++ S + + +I
Sbjct: 153 GQRIMTTAHLSPPQGPVEPGGFDFRRHAWFQRLGAVGY----TRVPVLMASPPSNSGVRI 208
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVV 126
++++ + + +R + A+ I L +A++LAI L +
Sbjct: 209 AALRMAISDRVREILPGDVGGFAAAVTTGDRSGIGRATLDNLRASNLAHLLAISGLHMGL 268
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVV 185
+ + +L +P + W I + ++ A G + +V
Sbjct: 269 LAGFVFLAFRTGFAL--VPAVALRWPTRKIAAVCALVAAAAYLMLSGGNVATERAFVMVS 326
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTF--PYSFSPDLLISEKGNLVALVDKNTLISN 243
L V + ++ + I++L S + + LVA+
Sbjct: 327 VMLGAVLIDRRAISLRAVAVAALIVLLLRPESVLSPGFQMSFAATTALVAVFGA------ 380
Query: 244 YSNPPSFIFSQWKSALI 260
+ P+F +W A
Sbjct: 381 LRDMPAFPGPRWLRAFG 397
>gi|27379941|ref|NP_771470.1| hypothetical protein bll4830 [Bradyrhizobium japonicum USDA 110]
gi|27353094|dbj|BAC50095.1| bll4830 [Bradyrhizobium japonicum USDA 110]
Length = 776
Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 64/391 (16%), Positives = 145/391 (37%), Gaps = 42/391 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F I P P F +F++ ++ + +P + S
Sbjct: 390 VMVDRRAITFRTLAVAALIVLAVAPEALVHPS-FQMSFAATLGLVALVQI--GMPNLFAS 446
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ T ++ + + + + HFH + +G++AN+ A+P+
Sbjct: 447 PDHSATARI----AMWGGREIAMLFLASLIAGLATTPYAAFHFHRVTPFGVLANLGAMPV 502
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAGL+ +L LD + + +M G+D ++ ++ ++ I
Sbjct: 503 VSALVMPAGLLGLLAAPFGLDGVFWWLMGIGIDWMVAVSRWVAALPGAVGRIPAFGIAPL 562
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT- 239
+ + ++M +T +R G++++ + I+ PD+LI+ G VA+ ++
Sbjct: 563 IAASLGIIVMGLLRTPLRWSGALVLLVAILWGLA---DRQPDILIAGDGQSVAVRGRDGH 619
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
L +N F+ +W +A P + +
Sbjct: 620 LQMIRANKDGFLLKEWLAADADPRDAGSPSLAAGVSC---------------------DE 658
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ CV +V + R D + C + +++T + ++++ + L QG+
Sbjct: 659 AGCVTPLADGRLVALALRIDALADDCSRAALVVTARPAPADCV---AMVVDRQRLAAQGA 715
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
L +T VK PW+
Sbjct: 716 LALTRRGDGFAVQAVKAR------GTDRPWS 740
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS--IPKMI 59
LS+ K P + ++ ARL PP P PG +DF+ +++GI A G+ +
Sbjct: 194 LSVRKGTAP-EVGSFVQLKARLMPPISPVRPGSYDFSRDMFFQGIGASGFVMGAIAAAVP 252
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + ++ + +RA + A A+ L
Sbjct: 253 PDAGGLRLRYAAFMQGLRDAIDARVRATLEGDNRAIATALLT 294
>gi|153009374|ref|YP_001370589.1| ComEC/Rec2-like protein [Ochrobactrum anthropi ATCC 49188]
gi|151561262|gb|ABS14760.1| ComEC/Rec2-related protein [Ochrobactrum anthropi ATCC 49188]
Length = 858
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 78/396 (19%), Positives = 143/396 (36%), Gaps = 45/396 (11%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P P F +FS+ I+ ++ + T +
Sbjct: 444 SPHEILGPS-FQMSFSATAALIAGYAWWSERNAIRQVGTEERGKTAYSFAGKVLK-PITA 501
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
A ++ IF HF+ +GL+ N+LA P+++ +V+P + ++LM L LD +
Sbjct: 502 AAATSLIAGLASGIFAAYHFNNTAPFGLVGNVLAEPVIALLVMPFAVFGLVLMPLQLDWV 561
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
P +M WG+ + HIA ++ + G +P + V + +L++ T ++ +
Sbjct: 562 PLQIMGWGIFAVRHIAAFVAKWSPDGNPGAMPALTIVLWAIALVLVIVLSTRLKALALPF 621
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPF 263
I + + P+ PD++ISE LV + + N S F WK+A +
Sbjct: 622 IVLGFAVFVREPF---PDIVISEDAKLVGVRLADGKFAVNRSRQSQFTIDNWKTAYLVEE 678
Query: 264 HEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
AP K + F C C R + M+ +
Sbjct: 679 FIAPPSGKNKKRTDGD-------------GFECEDGL-CTISLRDGRTLAYTADVAMLEI 724
Query: 324 SCQLSDILITTIRD-INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK--------- 373
+C + D++I + + L I+ + L +G++EI + + N
Sbjct: 725 ACNIGDVVILAVSGKDPACGRSTILSISKQELALKGAVEIRLGERPDKNRSLKAISGDTY 784
Query: 374 ---------------VKFIIKSAIENLHFPWTKHRI 394
+ I AI+ PW HRI
Sbjct: 785 DVAKPEMSQQTSELQPEDRITYAIDAPSRPWHLHRI 820
Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 9/143 (6%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--IYSSESH 65
+ G RL PSGP PG +DF+F +Y+ GI A G+F PK+ + +
Sbjct: 230 PASTSIGGGLAGFVRLRIPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKVATVSQPDEL 289
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILA 118
+ I+ ++ I IG + AS + I +A+IL+
Sbjct: 290 TAEISQWIAMLRVRVSERIEEVIGGEDGSVASALVAGTRAGISERTNEDLRKAGLAHILS 349
Query: 119 IPILSFVVIPAGLIAILLMILSL 141
I L + ++ L + +L
Sbjct: 350 ISGLHMALAAGVIMLTLRSVFAL 372
>gi|300023413|ref|YP_003756024.1| ComEC/Rec2-related protein [Hyphomicrobium denitrificans ATCC
51888]
gi|299525234|gb|ADJ23703.1| ComEC/Rec2-related protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 779
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 66/389 (16%), Positives = 135/389 (34%), Gaps = 39/389 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I + + + P D F + ++A+ + + +
Sbjct: 356 IDRPAMALRNIALAAFLILIVFPESLL-----DAGFQMSFAAVTALVAAHELLTRFLGTN 410
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S + + + + + S + + F +FH Y ++AN++AIPI +
Sbjct: 411 SRPHPVARVVKFFGEIIASTLI------ASVAVAPFAAYNFHQSQQYAVLANMIAIPICN 464
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFVT 182
+V+PA L A++LM L+ I MAWG++ + A+ + IP +F
Sbjct: 465 IIVMPAALGAMILMPFGLEWIALKPMAWGIEGMAWCANMVGALPGAVGHLPEIPTIAFAL 524
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+++ L + +T IR +G+ G+ ++ L P+ PD+L+++KG LVA+ D + +S
Sbjct: 525 MLIGGLWLTLWRTRIRLVGA---GLALLGLVATPWMPRPDVLVAQKGMLVAVRDASGKLS 581
Query: 243 NYS-NPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
+ + + +W
Sbjct: 582 SLPAHGAKYDLERWLEYDGDGRSARDAQAGGAFSC---------------------DAVG 620
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
C+ + V V + + C +DILI +I + G+
Sbjct: 621 CIAHVK-GATVAVARHPAAVADDCLNADILILDDPKPADCAVPG-TVIDVFDRWRNGAYA 678
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ + + + A PW+
Sbjct: 679 LYLARDEASPEPRVRLETVAAHRGERPWS 707
Score = 72.9 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 51/318 (16%), Positives = 109/318 (34%), Gaps = 25/318 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW--K 71
+ A LSPP+ PA PG FD+ ++++ + A+GY ++ P + ++ +
Sbjct: 169 GDRVRLKANLSPPAKPALPGGFDYARTAWFDQVGAVGYAFAPPAIEAHADGGTLTAQYRR 228
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLI--------KHFHCIPVYGLIANILAIPILS 123
I +++Q IRA + A + + + GL +IL+I L
Sbjct: 229 GIETLRQLIATRIRAVLPGETGEIALALITGERGGISAETNNAFKNSGLF-HILSISGLH 287
Query: 124 FVVIPAGLIA-----ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V++ L + + +P +A + I+ ++++ F R
Sbjct: 288 MVIMAGALFYSVRLLLAAIPFFALRLPIKKIAAAI-GILGALGYLAISGGAFATVRSAL- 345
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS------FSPDLLISEKGNLV 232
+ I+ +L+ +R+I I I+ + + + L++ L
Sbjct: 346 -MILIIFGAVLIDRPAMALRNIALAAFLILIVFPESLLDAGFQMSFAAVTALVAAHELLT 404
Query: 233 ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ N+ + F S LI AP Q + + L ++
Sbjct: 405 RFLGTNSRPHPVARVVKFFGEIIASTLIASVAVAPFAAYNFHQSQQYAVLANMIAIPICN 464
Query: 293 KFLCIKKSFCVGCHRSDV 310
+ + +
Sbjct: 465 IIVMPAALGAMILMPFGL 482
>gi|49475428|ref|YP_033469.1| DNA uptake protein [Bartonella henselae str. Houston-1]
gi|49238234|emb|CAF27444.1| DNA uptake protein [Bartonella henselae str. Houston-1]
Length = 772
Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 82/380 (21%), Positives = 149/380 (39%), Gaps = 38/380 (10%)
Query: 16 TIEGIARLSP-PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+I G+ L+ P P F +FS+ I+ ++ + + I
Sbjct: 408 SIAGLITLAIMPHEILGPS-FQMSFSATAALIAFFDWWNGRSFFRKRKTTSSYVGAGVIY 466
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
++ I+ + HF I + +I+N LA+PI+S ++IP GLIA
Sbjct: 467 F--AFLSILSICASSFVAGIASGIYAVYHFSNIAFFSIISNALALPIVSILIIPFGLIAA 524
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
M L+ P +M +G+ +I IAH ++ + G +P ++ V + + ++FCK
Sbjct: 525 FAMCWGLEWFPLQIMGFGVGFVIKIAHAVTSISPDLNPGFMPLSALVLFSIGLVGLIFCK 584
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T++R S I + I + + L+I+E +V ++ + L ++ F S
Sbjct: 585 TSLRFFFSFFILVGIYVCLVY---SPVQLIIAENMRVVGVISERKLYIDHYRISKFTTSI 641
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
WK + P E +F+C CV + + V V
Sbjct: 642 WKKSFRVNEIIKPTKYGPSFNE----------------QFVC-DNHACVSLLANGLKVIV 684
Query: 315 LKRKDMIRLSCQLSDILITTIRD-INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
L+ + C +DI+I T T + ++ TP+ L +GS+ +T
Sbjct: 685 LRGE---IDQCVEADIIIKTFSMSDPTCNKKMKIIFTPQQLLSRGSVMMTKSGE------ 735
Query: 374 VKFIIKSAIENLHFPWTKHR 393
I + + PW HR
Sbjct: 736 ----IIWSSVGFYRPWNNHR 751
Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/260 (16%), Positives = 87/260 (33%), Gaps = 19/260 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS + + G ++ SGP PG +DF+F +Y+KGI A G + P I
Sbjct: 198 LSARRLPHGLAIGDGLYGKVKIRALSGPVHPGGYDFSFHNYFKGIGAQGIYLGKPIKISV 257
Query: 62 --SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH-------FHCIPVYGL 112
+S +KI +++ + IR I + A+ + +
Sbjct: 258 SQPDSILAIVLQKIENLRTNMTQRIRMTIDGEKGSVAAALITGQRGGISNDINEALRTAG 317
Query: 113 IANILAIPILSFVVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
+A+IL+I L ++ + + L + A + ++I +
Sbjct: 318 LAHILSISGLHMTLLSGIVFMIIRSFLALFPVFSSYYSAKKFAAIIALMITA---FYLLL 374
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
+ + + +++ +L +R+ + I+ S + S
Sbjct: 375 SGIAVSAQRSFVMIAVMLIAVLFNRSAVTMRNFSIAGLITLAIMPH-EILGPSFQMSFSA 433
Query: 228 KGNLVALVD-KNTLISNYSN 246
L+A D N
Sbjct: 434 TAALIAFFDWWNGRSFFRKR 453
>gi|49474278|ref|YP_032320.1| DNA uptake protein [Bartonella quintana str. Toulouse]
gi|49239782|emb|CAF26172.1| DNA uptake protein [Bartonella quintana str. Toulouse]
Length = 752
Score = 205 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 84/380 (22%), Positives = 149/380 (39%), Gaps = 38/380 (10%)
Query: 16 TIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I G+ L+ P P F +FS+ I++ ++ + + + I
Sbjct: 407 AIAGLIILAITPHEILGPS-FQMSFSATAALIASFDWWSRRVSSHTRKATPSYVGGRIIH 465
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
A++ ++ HF I G+I+N LA+P++S ++IP GLIA+
Sbjct: 466 F--AFLSVTSTCASSFVAGAASGVYAAYHFSNIAFLGVISNALALPVISILIIPFGLIAV 523
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
M LSL+ +P +M G+D++I IAH + G +P ++ V + ++FCK
Sbjct: 524 FAMFLSLEWLPLQIMGLGVDLVIKIAHAVRAVSPALNPGFMPLSALVFFSGGLVGLIFCK 583
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T+IR S+ I + I I L+I++ NLV +++ L ++ F S
Sbjct: 584 TSIRFFFSLFILVGICICLMH---SPVQLIIADNINLVGVINGKKLYTDRYRISKFTTSI 640
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
W+ + P +F+C C + V V
Sbjct: 641 WEKSFRVNETIKPTKYGPSFN----------------GQFVCDD-HICSSLSENGFRVVV 683
Query: 315 LKRKDMIRLSCQLSDILITTIRDIN-TKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
L C +D+++ T + T + TP+ L +GS+ +T
Sbjct: 684 LH---GKIDQCVEADVIVKTFTMNDQTCNRKTQITFTPQQLLSRGSVMMT---------- 730
Query: 374 VKFIIKSAIENLHFPWTKHR 393
+ I + + H PW HR
Sbjct: 731 KRGDIIWSSKGFHRPWNMHR 750
Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 102/251 (40%), Gaps = 20/251 (7%)
Query: 2 LSITKKYDPF--PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+ ++ K+ P+ + G ++ SGP PG +DF+F +Y+KGI A G + P I
Sbjct: 195 VRLSAKHLPYGLAIGDGLYGKVKIRALSGPVRPGGYDFSFHNYFKGIGAQGIYLGKPMKI 254
Query: 60 YSSESH--NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VY 110
+ + +KI +++ + +IR IG + A+ + I
Sbjct: 255 SVPPPYTMLSILLQKIENLRMNMTQKIRMAIGEEKGSVAAALITGQRGGISDNTNEALRI 314
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA----WGLDIIIHIAHRISVA 166
+A++L+I L ++ + ++ + L+L + + + +I A + ++
Sbjct: 315 SGLAHVLSISGLHMALLSSMVLVSIRSFLALFPVFSSYHSTKKFAAIVALIITAFYLVLS 374
Query: 167 HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF-PYSFSPDLLI 225
R SFV I V + ++ ++ I + G+ I+ + S +
Sbjct: 375 GGAVSAQR----SFVMITVMLVAVLCNRSAITMRNFAIAGLIILAITPHEILGPSFQMSF 430
Query: 226 SEKGNLVALVD 236
S L+A D
Sbjct: 431 SATAALIASFD 441
>gi|240850323|ref|YP_002971716.1| ComEC/Rec2-related protein [Bartonella grahamii as4aup]
gi|240267446|gb|ACS51034.1| ComEC/Rec2-related protein [Bartonella grahamii as4aup]
Length = 754
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 87/380 (22%), Positives = 152/380 (40%), Gaps = 38/380 (10%)
Query: 16 TIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+I G+ L+ P P F +FS+ I+ ++ + + I+
Sbjct: 408 SIAGLITLAMTPHEILGPS-FQMSFSATAALIAFFDWWSGRSFFRKRKTTPSYVGGGVIN 466
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
S L+ +++ +++ I+ HF +I+N A+P++S VIP GLIA+
Sbjct: 467 FAFLSMLSTCASSL--VAGSASGIYAAYHFSNTASLSIISNAFALPVISIFVIPFGLIAV 524
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
L M+ + +P +M +G+D++I IAH I + G +P ++ V + + + + FCK
Sbjct: 525 LAMLGGFEWLPLQIMGFGVDLVIKIAHAIKAISPDLNPGFMPLSALVLLSIGLVGLTFCK 584
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T IR ++ I I I L+I++ LV ++ L + + F S
Sbjct: 585 TPIRLFFNLFILAGISICVMH---SPVQLIIADNMRLVGVIYDKKLYIDRYHISKFTTSI 641
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
WK + P L +F+C C + + V V
Sbjct: 642 WKKSFRVNETIKPTKYGPSLH----------------GQFIC-DYHVCTSLLENGLKVVV 684
Query: 315 LKRKDMIRLSCQLSDILITTIRDI-NTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
L+R+ C +DILI T T ++ TP+ L +GS+ +T
Sbjct: 685 LQRE---TDQCVEADILIQTFVMRNPTCYKKAKIIFTPQQLLSRGSVMMTKGGD------ 735
Query: 374 VKFIIKSAIENLHFPWTKHR 393
I + H PW HR
Sbjct: 736 ----IIWSSLGFHRPWNMHR 751
Score = 83.3 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 87/253 (34%), Gaps = 24/253 (9%)
Query: 2 LSITKKYDP--FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+ ++ +Y P + G ++ SGP PG +DF+F +Y+K I A G + P+ I
Sbjct: 196 IRLSARYLPSGLEIGDGLYGKVKIRAFSGPVRPGGYDFSFHNYFKRIGAQGVYLGKPRKI 255
Query: 60 YS--SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH-------FHCIPVY 110
+ +KI +++ IR + + A+ + +
Sbjct: 256 SVSQPDGIFAIILQKIENLRTKMTQRIRIALEGEKGSVAAALITGQRAGISNETNEALRT 315
Query: 111 GLIANILAIPILSFVVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISV 165
+A+IL+I L ++ ++ + + A +A I+
Sbjct: 316 AGLAHILSISGLHMALLSGIVLLSIRSFLAFFPVFSSYYSSKKFAA------IVAFMITA 369
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP--YSFSPDL 223
+ I ++ L+ + C + + + I I + T S +
Sbjct: 370 FYLLLSGLAISAQRSFVMIAVMLVAILCNRSAITMRNFSIAGLITLAMTPHEILGPSFQM 429
Query: 224 LISEKGNLVALVD 236
S L+A D
Sbjct: 430 SFSATAALIAFFD 442
>gi|126726369|ref|ZP_01742210.1| competence protein [Rhodobacterales bacterium HTCC2150]
gi|126704232|gb|EBA03324.1| competence protein [Rhodobacterales bacterium HTCC2150]
Length = 699
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 68/392 (17%), Positives = 137/392 (34%), Gaps = 46/392 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A I + P PG F +F++ ++ G + ++ +
Sbjct: 352 ILVNRRAISLRAVALAATIVLILRPESLVSPG-FQMSFAATTALVAVFGAWRNV--RLPE 408
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + I + A + + F HF+ I +GLIAN+ ++P+
Sbjct: 409 TWPRLPKFLQPIIGV---------AASSAIAGLATAPFGAAHFNQIAQFGLIANLASVPV 459
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+ +V+P ++A L I VM G+ I+ +A ++ I R
Sbjct: 460 MGLIVMPGAVLAGCLAPFGGAWIGLWVMKIGISWILSVAEFVAAMDGAVTYIPRPDTAVL 519
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + L ++ + +R +G G + + + P +L+SE GNL L+ K
Sbjct: 520 PILSLGMLFLIVWRGRVRWLGV---GGVMAAILLWFQVERPQMLVSESGNLFGLMSKQGR 576
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
I +++ F+ S W L + + + K
Sbjct: 577 ILSHAKGDGFVASAWPENDGD-------------------GLDQSGANNRAGLVTADKVV 617
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ +I + I +C + I I + C ++ L+K GSL
Sbjct: 618 LAKFGSQKILITRGKYAPEQIAQNCHKATISILAQKAPEVDGCR---ILGRAELKKLGSL 674
Query: 361 EITIIPPSNDNDKVKFIIKSAIEN-LHFPWTK 391
I +K + +I A + WT+
Sbjct: 675 SI-------KEEKGELVILGAKQATGRRLWTR 699
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 87/240 (36%), Gaps = 9/240 (3%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+++ T+ LS PSGP PG FDF S++ G+ +GY + + E
Sbjct: 163 DQRFITLAPGMTLMTTGHLSQPSGPVEPGGFDFQRHSWFIGLGGLGYTRVPALELRAPEK 222
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL----IANILAIP 120
++ + + +A+ ++ + V+ L +A++LAI
Sbjct: 223 GSSLAIFRARKAISRGILAGMQGREAGFAAAIAVGDRANLDQETVHALRDTNLAHLLAIS 282
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS- 179
L ++ + ++ +I ++P+ + + I I+ G T
Sbjct: 283 GLHMGLLTGFVFTLIRLIF--ASVPYVALRLPIKKIAASCAMIAAFAYLLMSGASVATER 340
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY--SFSPDLLISEKGNLVALVDK 237
+V+ L + + ++ + TI+++ S + + LVA+
Sbjct: 341 AFIMVMVMLGAILVNRRAISLRAVALAATIVLILRPESLVSPGFQMSFAATTALVAVFGA 400
>gi|83311901|ref|YP_422165.1| membrane metal-binding protein [Magnetospirillum magneticum AMB-1]
gi|82946742|dbj|BAE51606.1| Predicted membrane metal-binding protein [Magnetospirillum
magneticum AMB-1]
Length = 714
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 54/392 (13%), Positives = 138/392 (35%), Gaps = 38/392 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ L P P +F + ++A+ Y +
Sbjct: 332 VLLDRRALSMRLVAWAAVAILLWQPDELIGP-----SFQMSFAAVAAMIAVYE--SLTPR 384
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + +I + + + +++ I HF+ V+ + AN++A+P+
Sbjct: 385 QTAWRAAHPGWLPAIGLYVFGTVVTTL--IAGFATAVYGIHHFNRFAVWSVAANMIAVPL 442
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSF 180
F V+P L+ +L+ L+++ + WG++ + +A ++ + + +P +
Sbjct: 443 TGFWVMPWALVMFVLLPFGLESLALVPLGWGVEGVNWVATWVASWPSSAVTLPILPLWAM 502
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
V + + + R G + + + + + ++ PDLL+ +G+ +AL
Sbjct: 503 VVFTLGGCWLCLWRGRWRWWGLLPMAVAVASMA---FARPPDLLVDGRGDGLALRTGEGR 559
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + W E S + + C + +
Sbjct: 560 LLLNGKGGRILKDTWSRRAGPEAPE----------------RWPKKSSSRDGRLRCDE-T 602
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
C+ +V ++K +D +C +DI+++++ T +++ L ++G
Sbjct: 603 GCLWRV-DGKVVALVKDEDNPEKACAGADIVVSSVPLRGTC-REARVIVDRFDLWRRGPH 660
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ + P + A PW H
Sbjct: 661 SLWLGPNGASVE------TVAGWQGDRPWAWH 686
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 18/237 (7%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY--SSESHNTWT 69
I A L PP PA PG FDF ++++ + AIG ++I ++
Sbjct: 145 TVGDRIRVRAMLMPPPQPAMPGAFDFARFAWFRQLGAIGTALGPVEVIAAGAATGWRADL 204
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIPIL 122
++ I+ + I A + A + I +A+IL+I L
Sbjct: 205 ATNVNEIRHAITARILAVLPGDRGAVTAALTTGDQMPISAPMMQAYRDSGLAHILSISGL 264
Query: 123 SFVVIPAGLIA---ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+ + LL + + + + W + I A ++ +P
Sbjct: 265 HITMAAGLVFVGLRTLLALFPPVALRYPIKKWAAALAIVFAGFYTLLAGS----PVPAQR 320
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF--PYSFSPDLLISEKGNLVAL 234
+ LL V + + I+L+ S + + ++A+
Sbjct: 321 SFFMTGLVLLAVLLDRRALSMRLVAWAAVAILLWQPDELIGPSFQMSFAAVAAMIAV 377
>gi|260459229|ref|ZP_05807484.1| ComEC/Rec2-related protein [Mesorhizobium opportunistum WSM2075]
gi|259034783|gb|EEW36039.1| ComEC/Rec2-related protein [Mesorhizobium opportunistum WSM2075]
Length = 817
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 77/391 (19%), Positives = 140/391 (35%), Gaps = 15/391 (3%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ L P P F +F++ + A +
Sbjct: 416 DRAALTMRNLAISAIAVILVSPHEVVGPS-FQMSFAATAALVGAYAGWADHRAGKTRPPP 474
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ K A ++ ++F I HF + L AN+ +PI+S
Sbjct: 475 PKRSLPGFLTR-KFLLATGGLAMTSIIAGSATALFAIWHFQRVSPLSLFANLAVMPIVS- 532
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
VV+ + + LLM LD +M GL +I I+ IS +G I + S + +
Sbjct: 533 VVMFLAVASALLMPFGLDAPSLYLMGKGLTAMIAISAWISERSPVDAVGLISQQSVLLVT 592
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL-VDKNTLISN 243
+ ++ T +R + L + +PD+L+SE LVAL + L +
Sbjct: 593 IALVIATMATTWLRLAALP---FALAGLLAVSDTRTPDVLVSEDARLVALPIGGGELAVS 649
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ P F WK AL + P + + Q + + + F C C+
Sbjct: 650 RARPNEFTVDNWKRALTSETIIPPEMFD---KADGQFDIADAVNLPPGAPFYCTDG-VCL 705
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR-DINTKLCNVSLLITPEILQKQGSLEI 362
H S I+ ++ + +C +D++I + + L++T L ++GS I
Sbjct: 706 ARHPSGAIIAHVEDRKDTWKACGFADLIIVNDATAYDACHNPLVLVVTKRQLARKGSAAI 765
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
S I A+++ + PW R
Sbjct: 766 FFDRQSATGPPT---ISFAVDSPYRPWHAQR 793
Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS K A + I G A+L PP+GP P +DF+F SY+ GI G+F PK++ +
Sbjct: 215 LSARKIPPEMTAGSLITGYAKLLPPTGPVRPESYDFSFDSYFAGIGGSGFFLGNPKVVAA 274
Query: 62 SESHNTWTWKKISSI---KQSFLNEIRANIGTYGSASASIFLIK-------HFHCIPVYG 111
+ + + S I +++ + IR ++G A+ ++ +
Sbjct: 275 DDGGMPLSARLSSGIENAREAIADHIRGSVGGAEGEIAAALIVGVRAGIPDEINEAMRRT 334
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSL 141
I +I++I L ++ ++ +L +L
Sbjct: 335 GIYHIISISGLHMALVAGTIMGLLRGAFAL 364
>gi|114764300|ref|ZP_01443528.1| competence protein [Pelagibaca bermudensis HTCC2601]
gi|114543248|gb|EAU46265.1| competence protein [Roseovarius sp. HTCC2601]
Length = 678
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 62/393 (15%), Positives = 128/393 (32%), Gaps = 51/393 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L ++ + I + P PG F +F++ ++ G +
Sbjct: 334 LLCNRRALSLRSVALAALIVLVLRPEALLGPG-FQMSFAATLALVAVFGAMRDLAIERGL 392
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + S + + + HF+ + YGL+AN++A+P+
Sbjct: 393 P--------------RLARPLLTLVVSSVTASLATAPVSMAHFNIVSHYGLVANLVAVPV 438
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSF 180
+ +V+P ++ LLM L L+ VMA GLD I+ +A ++ R P
Sbjct: 439 MGLIVVPMAVVTALLMPLGLEATALWVMALGLDWILTVAGTVTGWDGALGQVRAPGAWVL 498
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ L++ + R G + + + + + P LLIS+ G LV +
Sbjct: 499 PLLASGGLILCLWQGRGRWAGLLPLSLAVT---LWASGGRPALLISDSGTLVGAMTPEGR 555
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ F+ + W +A E+ + +
Sbjct: 556 ALSRERGAGFVAAVWLENDGQAGGQAVAAALWPEHEQPRVA------------------- 596
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ + V KR C ++++++ + C + PE L + G++
Sbjct: 597 -RISVAGAMVTHFQGKRAAAGFRGCGARELVVSSTDLPDWPGCE---IFDPERLARTGAV 652
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
I P + W + +
Sbjct: 653 AIWQTPTGPRIETA---------AGRRLWHRGK 676
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 84/244 (34%), Gaps = 19/244 (7%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ P LS P+G A PG FDF +++ + A+GY + + ++
Sbjct: 147 SQGNPPPRPGDVAILTGHLSGPAGAAEPGGFDFRRHAWFLRLGAVGYTRTPVLRLVPAQR 206
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANIL 117
+ ++ +RA + A A+ + I + L +A++L
Sbjct: 207 DT-----PVLRLRLKIAERVRAVLPGETGAFAAAIMTGDRSAIGLQTLQALRHSNLAHLL 261
Query: 118 AIPILSFVVIPAGLIAI--LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
AI L ++ + L+++L G I +A + + G +
Sbjct: 262 AISGLHMGLLAGVVFTATRLVLLLPRHTRHNWP---GKKIAAGVALVAAAGYLALSGGNV 318
Query: 176 PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF--PYSFSPDLLISEKGNLVA 233
+V L+ + C + S+ + I+++ + + LVA
Sbjct: 319 ATQRAFVMVAVMLVALLCNRRALSLRSVALAALIVLVLRPEALLGPGFQMSFAATLALVA 378
Query: 234 LVDK 237
+
Sbjct: 379 VFGA 382
>gi|13470827|ref|NP_102396.1| DNA uptake protein [Mesorhizobium loti MAFF303099]
gi|14021570|dbj|BAB48182.1| DNA uptake protein [Mesorhizobium loti MAFF303099]
Length = 753
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 76/391 (19%), Positives = 141/391 (36%), Gaps = 15/391 (3%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ T + P P F +F++ + A +
Sbjct: 353 DRAALTMRNLATSAIAVIVVSPHEVVGPS-FQMSFAATAALVGAYAGWADHHAGKARPPP 411
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ K A + ++F I HF + L AN+ +PI+S
Sbjct: 412 PKRSLPGFLTR-KFLLATGGLAMTSIIAGCATALFAIWHFQRVSPLSLFANLAVMPIVS- 469
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
VV+ + + LLM LD +M GL +I I+ IS +G I S + +
Sbjct: 470 VVMFLAVASALLMPFGLDAPTLYLMGKGLTAMIAISAWISERSPVDAVGLISLQSVLLVT 529
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL-VDKNTLISN 243
+ ++ T +R + L T + +PD+LISE LVAL + L +
Sbjct: 530 IALVIATMATTWLRLAAVP---FALAGLLTVSDTRTPDVLISEDARLVALPIGGGELAVS 586
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ P F WK AL++ P + + Q + + + F C C+
Sbjct: 587 RARPNEFTVDNWKRALVSETIVVPEMFD---KADGQFDIADAVNLPPGAPFYCTDG-VCL 642
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD-INTKLCNVSLLITPEILQKQGSLEI 362
H S I+ ++ + +C +D+++ + + L++T L ++GS +
Sbjct: 643 ARHPSGAIIAHVEDRKDTWKACGFADLIVVNDATGYDACHNPLVLVVTKRQLARKGSAAV 702
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
S + A++ + PW + R
Sbjct: 703 FFDRQSATG---PLTVSFAVDGPYRPWHEQR 730
Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS A + + G A+L PP+GP P +DF+F SY+ GI G+F PK++ +
Sbjct: 152 LSARDIPADMTAGSLVTGYAKLLPPTGPVRPDSYDFSFDSYFAGIGGSGFFLGNPKLVSA 211
Query: 62 SESHNTWTWKKISSI---KQSFLNEIRANIGTYGSASASIFLIK-------HFHCIPVYG 111
++ T + S I +++ + IRA +G A+ ++ +
Sbjct: 212 TDDEVPLTARLFSGIENAREAIADHIRATVGGAEGEIAAALIVGVRAGIPDEINEAMRRT 271
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSL 141
I +I++I L ++ ++ +L +L
Sbjct: 272 GIYHIISISGLHMALVAGTIMGLLRGAFAL 301
>gi|163868120|ref|YP_001609324.1| putative DNA uptake protein [Bartonella tribocorum CIP 105476]
gi|161017771|emb|CAK01329.1| putative DNA uptake protein [Bartonella tribocorum CIP 105476]
Length = 769
Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 84/380 (22%), Positives = 144/380 (37%), Gaps = 38/380 (10%)
Query: 16 TIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+I G+ L+ P P F +FS+ I+ ++ + I+
Sbjct: 408 SIAGLITLAIRPHEILGPS-FQMSFSATAALIAFFDWWSGRSIFRKRKIVSSYVREGVIN 466
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+++ I+ HF +I+N A+PI+S +VIP GLIA+
Sbjct: 467 F--AFLSILSTCASSFVAGSASGIYAAYHFSNTASLSIISNAFALPIISILVIPFGLIAV 524
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
L M+ + +P +M +G+D++I IAH I + G +P ++ V + + + + FCK
Sbjct: 525 LAMLGGFEWLPLQIMGFGVDLVIKIAHAIKAISPDLNPGFMPLSALVLLSIGLVGLTFCK 584
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T IR S+ I I L+I++ LV ++ L + + F S
Sbjct: 585 TPIRLFFSLFILAGFSICIMH---SPVQLIIADNMRLVGVIHDKKLYIDRYHHSKFTTSI 641
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
W+ + P +F+C C + + V V
Sbjct: 642 WEKSFRLNETIKPTRYGPSFH----------------GQFIC-DHDVCTSLLENGLKVIV 684
Query: 315 LKRKDMIRLSCQLSDILITTIRDIN-TKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
L+ + C +DILI T N T ++ TP+ L +GS+ +T
Sbjct: 685 LRGE---VDHCIEADILIQTFLVHNQTCHKKAKIIFTPQQLLSRGSVMMTKSRD------ 735
Query: 374 VKFIIKSAIENLHFPWTKHR 393
I + H PW HR
Sbjct: 736 ----ITWSSLGFHRPWNMHR 751
Score = 81.4 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 87/264 (32%), Gaps = 25/264 (9%)
Query: 2 LSITKKYDP--FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+ ++ +Y P + G +L SG PG +DF+F +Y+KGI A G + PK I
Sbjct: 196 VRLSARYLPSGLAIGDGLYGKVKLRAFSGSVRPGGYDFSFHNYFKGIGAQGVYLGKPKKI 255
Query: 60 YS--SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH-------FHCIPVY 110
+ +K +++ IR + + A+ + +
Sbjct: 256 SVSQPDGILAIILQKTENLRMKMTQRIRFALEGEKGSVAAALITGQRAGISSETNEALRK 315
Query: 111 GLIANILAIPILSFVVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISV 165
+A+IL+I L ++ ++ + + +A +A I+
Sbjct: 316 AGLAHILSISGLHMALLSGLVLLSIRSFLAFFPIFSSYYSSKKLAA------IVAFMITA 369
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP--YSFSPDL 223
+ I ++ L+ + C + + + I I + S +
Sbjct: 370 FYLLLSGLAISAQRSFVMIAVMLVAILCNRSAVTMRNFSIAGLITLAIRPHEILGPSFQM 429
Query: 224 LISEKGNLVALVD-KNTLISNYSN 246
S L+A D +
Sbjct: 430 SFSATAALIAFFDWWSGRSIFRKR 453
>gi|319783656|ref|YP_004143132.1| ComEC/Rec2-related protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169544|gb|ADV13082.1| ComEC/Rec2-related protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 820
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 77/391 (19%), Positives = 141/391 (36%), Gaps = 15/391 (3%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + P P F +F++ + A + +
Sbjct: 417 DRAALTMRNLAISAIAVIVVSPHEVVGPS-FQMSFAATAALVGAYAGWADHRAGKARTPP 475
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ K A ++ ++F I HF + L AN+ +PI++
Sbjct: 476 PKRSLPGFLTR-KFLLAAIGLAMTSIIAGSATTLFAIWHFQRVSPLSLFANLAVMPIVT- 533
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
VV+ + + LLM LD +M GL ++I I+ IS +G I + S + +
Sbjct: 534 VVMFLAVASALLMPFGLDWPALYLMGKGLTMMIAISGWISERSPVDGVGLISQQSVLLVA 593
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL-VDKNTLISN 243
+ ++ T +R + L T + +PD+LISE LVAL + L +
Sbjct: 594 IALVIATMATTWLRLAALP---FALAGLLTVSDTRTPDVLISEDARLVALPIGGGELAVS 650
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
P F WK AL + P V Q + + + F C CV
Sbjct: 651 RQRPNEFTVDNWKRALTSETIVVPEVFDNS---DGQFDVADAVELPPGSPFYCSSG-VCV 706
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR-DINTKLCNVSLLITPEILQKQGSLEI 362
H S I+ ++ + +C +++++ + + L+IT L ++GS +
Sbjct: 707 ARHMSGAIIAYVEDRKDTWKACGFAELIVVNDATAYDACHNPLVLVITKRQLARKGSAAV 766
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
S I A+++ + PW R
Sbjct: 767 FFDRQS---ATTPATISFAVDSPYRPWHTQR 794
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS K A + I G A+L PP+GP P +DF+F SY+ GI G+F PK++ +
Sbjct: 216 LSARKIPADVTAGSLITGYAKLLPPTGPVRPDSYDFSFDSYFAGIGGSGFFLGNPKLVVT 275
Query: 62 SESHNTWTWKK---ISSIKQSFLNEIRANIGTYGSASASIFLIK-------HFHCIPVYG 111
+ + + + + ++ + IRA++G A+ ++ +
Sbjct: 276 DDGDMPLSARISSSVENAREGIADHIRASVGGAEGEIAAALIVGVRAGIPDDINEAMRRT 335
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSL 141
I +I++I L ++ ++ +L +L
Sbjct: 336 GIYHIISISGLHMALVAGTIMGLLRGAFAL 365
>gi|121601648|ref|YP_988909.1| competence protein [Bartonella bacilliformis KC583]
gi|120613825|gb|ABM44426.1| competence protein [Bartonella bacilliformis KC583]
Length = 757
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 80/380 (21%), Positives = 150/380 (39%), Gaps = 38/380 (10%)
Query: 16 TIEGIARLSP-PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I G+A + P P F +FS+ I+A ++ + + K +
Sbjct: 408 AIAGLAIVVVVPHEILGPS-FQMSFSATIALIAAFEWWSKRHSSDRRKITPSHVGGKIVR 466
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ ++ I+ HF + + +I+N LA+PI+S +V+P GLIA
Sbjct: 467 F--AFLSFSSTCSSSLIAGLASGIYAAYHFTNVAPFSIISNALALPIVSILVMPFGLIAA 524
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
M+L + +P +M +G+ ++ IA+ I+ G IP ++ + + + + + F K
Sbjct: 525 FAMLLEFEWLPLQIMGFGISLVTKIAYSITAISPVINPGFIPLSTLILLSLGLVGLTFFK 584
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T++R I I ++ + L+I++ NLV ++++ L ++ S F S
Sbjct: 585 TSLR---FFFIIFIFIGIWVYVMRSPVQLIIADNMNLVGIINEKILYADRSRVSKFTKSV 641
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
W+ + P L +F+C C + + V V
Sbjct: 642 WEKSFYINETIKPTKIGPALN----------------GQFVCDDN-ICTALLENGLKVVV 684
Query: 315 LKRKDMIRLSCQLSDILI-TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
L ++ C SD++I T+I T ++ TP+ L +GS+ +
Sbjct: 685 LYKE---TDQCIKSDVIIQTSIMHDKTCNDVAGIVFTPQQLLSRGSVMMMKNKD------ 735
Query: 374 VKFIIKSAIENLHFPWTKHR 393
I H PW HR
Sbjct: 736 ----IIWYYTAFHRPWNVHR 751
Score = 84.1 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 90/245 (36%), Gaps = 14/245 (5%)
Query: 2 LSITKKYDP--FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+ + ++ P + G RL SGP PG +DF+F +Y+ I A G ++ P I
Sbjct: 196 VRLVARHLPDGSVPGDGLYGKVRLRALSGPVRPGSYDFSFHNYFNRIGAQGTYFGKPIKI 255
Query: 60 YS--SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VY 110
++ +KI +++ IR I + A+ + I
Sbjct: 256 SVSQPDTILGMASQKIENLRMKMTQRIRTKISGEEGSVAAALITGQRGAISSDTNEALRM 315
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
+A+IL+I L ++ +I ++ +L + + +I +A I+ +
Sbjct: 316 SGLAHILSISGLHMALLSGMVIIVIRSFFALFPVFSSYYSTKKFSVI-VALIITAFYLIL 374
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP--YSFSPDLLISEK 228
+ +V L+ V C + + + I I++ S + S
Sbjct: 375 SGAAVAAQRSFVMVAVMLIAVLCNRSGVTMRNFAIAGLAIVVVVPHEILGPSFQMSFSAT 434
Query: 229 GNLVA 233
L+A
Sbjct: 435 IALIA 439
>gi|163760897|ref|ZP_02167976.1| hypothetical protein HPDFL43_07122 [Hoeflea phototrophica DFL-43]
gi|162281941|gb|EDQ32233.1| hypothetical protein HPDFL43_07122 [Hoeflea phototrophica DFL-43]
Length = 809
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 97/403 (24%), Positives = 175/403 (43%), Gaps = 15/403 (3%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSS 62
+ + + L PS PG F +F++ I+A + ++
Sbjct: 396 LDRPALTMRNVALAAIVIILLSPSAVVGPG-FQMSFAATAALIAAYAALSRRKAQRDWTP 454
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ I A + +F HFH GL+AN+LA+P++
Sbjct: 455 APASHMLIVPGWLIWLFKAAVGLAITSLVAGLATGLFSAHHFHRFAGNGLLANMLAMPLV 514
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+ VV+PAGL+A+LLM LD +P M GL +I +AH I + +G+IP +
Sbjct: 515 TLVVMPAGLLAMLLMPFCLDQLPLQAMGAGLGGVIAVAHYIDGMGGDVLVGQIPFHATAV 574
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
F+++VF ++ +R G ++G+ ++ P +LISE G LV L L S
Sbjct: 575 AGAGFIVLVFLRSRLRLAGFALLGLGALLALPPLAPNRPQILISEDGRLVGLYGATGLAS 634
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEI----LRSMQPRKFLCIK 298
N P +F+F QW++AL P H P +++ + + + +P +F C +
Sbjct: 635 NAKRPSAFVFGQWQTALGGPNHRTPAMRRPLVSDNQLPGETLTPLLQAAAQEPSRFHCAE 694
Query: 299 KSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQG 358
+ C H I+ + ++I +C +D+++ +I ++ + + L+T L+ G
Sbjct: 695 RGMCAAGHAGATIIAI-DHPELIGPACDRADLVVVSIPVYMSRCRSGATLVTARSLRTTG 753
Query: 359 SLEITI--------IPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+L I + + +F I SA++ + PWT R
Sbjct: 754 ALAIRMAQNRLPTAAQDRGSGTRPRFAIDSALQGVVRPWTIQR 796
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 90/240 (37%), Gaps = 21/240 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L ++P P I G ARLS PSGP PG +DF F ++ GI A G+F+ P+ +
Sbjct: 196 LVARAAHEPVPVGAMIAGRARLSSPSGPVLPGGYDFAFRAFVDGIGAHGFFFQAPEKLAL 255
Query: 62 SESHNTWTWK---KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL------ 112
+ +++ + +R+ + A+ + I +
Sbjct: 256 RPPDGGMAENFKLGLRGVRERIASRVRSVLPGDAGGIAAALTVSDRRGISRPTVEALRAT 315
Query: 113 -IANILAIPILSFVVIPAGL-----IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
+A+ILAI L + L + + ++ P +A ++ + + ++
Sbjct: 316 GLAHILAISGLHMALAAGLLYVGLRLIMAGFPSLVEGWPVKKLAAA-GALVTASAYLLIS 374
Query: 167 HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
R ++I+ L+ V + ++ + +IIL + P +S
Sbjct: 375 GGSVATQR--AWVMLSIM---LIAVILDRPALTMRNVALAAIVIILLSPSAVVGPGFQMS 429
>gi|239832033|ref|ZP_04680362.1| ComEC/Rec2-related protein [Ochrobactrum intermedium LMG 3301]
gi|239824300|gb|EEQ95868.1| ComEC/Rec2-related protein [Ochrobactrum intermedium LMG 3301]
Length = 817
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 77/402 (19%), Positives = 152/402 (37%), Gaps = 57/402 (14%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P P F +FS+ I+ ++ ++ +K+ + F+ I
Sbjct: 403 SPHEILGPS-FQMSFSATAALIAGYAWW-------SERNANRRVGAEKLRRSRDGFVGRI 454
Query: 85 ------RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
A ++ IF HF+ GL+ N+LA P ++ +V+P + ++LM
Sbjct: 455 LKLVAAAAGTSLIAGLASGIFAAYHFNNTAPLGLVGNVLAEPAIALLVMPFAVFGLVLMP 514
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
L LD +P +M WG+ + HIA ++ + G +P + V + +L V T ++
Sbjct: 515 LQLDWVPLQIMGWGIFAVRHIAAFVATWSPDGNPGTMPALTLVFWTIALVLAVVLSTRLK 574
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKS 257
+ + + +++ P+ PD+++SE LV + ++ N + P F WK+
Sbjct: 575 VLALPFVVLGLMVFLREPF---PDIVVSEDAKLVGVRLEDGRLAVNRNRPSQFTIDNWKT 631
Query: 258 ALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKR 317
A + P K++ + F C++ C R +
Sbjct: 632 AYLVKEMIPPLSVKKE-------------KLAASDGFECVEG-VCTITLRDGRTLAYTGE 677
Query: 318 KDMIRLSCQLSDILITTIRD-INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
M ++C + D++I + T + I+ L +G++EI + +++ K
Sbjct: 678 PAMREIACNIGDVVILAVPGKDATCGRSTITSISKRDLALKGAVEIRLGQQRDESRSPKA 737
Query: 377 ------------------------IIKSAIENLHFPWTKHRI 394
I A++ PW HRI
Sbjct: 738 ATGKSHETARLDEKQPRPDLRPDDRITYAVDVPSRPWHLHRI 779
Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK--MIYSSESHNTWTW 70
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK ++ +
Sbjct: 194 IGSGLSGFARLRIPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKVAIVPPPDELTAEIS 253
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPILS 123
+ I+ ++ I IG + AS + I +A+IL+I L
Sbjct: 254 QWIAMLRVRVSERIEEVIGGEDGSVASALVAGTRAGISEQTNDDLRKAGLAHILSISGLH 313
Query: 124 FVVIPAGLIAILLMILSL 141
+ ++ L +L
Sbjct: 314 MALAAGVVMLTLRSAFAL 331
>gi|288958448|ref|YP_003448789.1| ComEC/Rec2-related protein [Azospirillum sp. B510]
gi|288910756|dbj|BAI72245.1| ComEC/Rec2-related protein [Azospirillum sp. B510]
Length = 717
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 66/393 (16%), Positives = 130/393 (33%), Gaps = 38/393 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + + P G P F +F++ I+A F +
Sbjct: 362 IMLDRHPLSMRLVAFAGMVTIAMDPEGMLGPS-FQMSFAAVVALIAA---FERGSPRLAE 417
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
W + + + + + F + HF I YG+++N++AIPI
Sbjct: 418 WRRDAGWVVRGLFYVGG------ILLTSVVATLATLPFSLFHFQQIAFYGVLSNLIAIPI 471
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSF 180
SF V+P LIA L+ + M WG +I A + +P F
Sbjct: 472 TSFWVMPWSLIAYALLPFGWEEPALIAMNWGDRAVIWTAEFFGRLPWASLTVPAMPAGGF 531
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+V+ + + R +G + I + PD+L++ G ++A+ +
Sbjct: 532 TALVLGGIWLCVWTRRWRWLGMLPILAGLAAPMLA---ERPDVLVAGDGTVMAVRMPDGR 588
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+S + W+ P + + +S
Sbjct: 589 LSASVKGGGRVTETWRERDGERTAADPWPAAGEWSDGERSLGC--------------DGL 634
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
C+ R + + + D + C +D ++TT + C L+I L+ +G+
Sbjct: 635 GCLYRVR-GRSMALSRLPDALDEDCGAADAVVTTAV---ARGCRADLVIDRWALRHEGAH 690
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+T+ + V+ + PWT R
Sbjct: 691 ALTVTADGIKVETVRGV------RGDRPWTGGR 717
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 76/204 (37%), Gaps = 11/204 (5%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI-Y 60
+ ++ +Y P + + A L PP PA PG FDF +++ G+ A G+ P+ I
Sbjct: 165 IRLSDRYPAPPPGSVVRVRATLLPPQAPAEPGAFDFQRRAWFMGLGATGFATGGPEQIEA 224
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGT--YGSASASIFLIKHFHCIPVY------GL 112
+ + + + + IG S + ++ + F
Sbjct: 225 PPVTGWSTIAIAFERARGAIAERVATAIGDPVEASVTTALLNGEEFGIPDGTMDDFRNSG 284
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+A++L+I L + L ++ +L+L +P+ + W + I + +S +
Sbjct: 285 LAHLLSISGLHVGIAAGILFYVVRALLAL--VPYIALRWPIKKIAALFGILSALAYTLLV 342
Query: 173 GRIPETSFVTIVVEFLLMVFCKTN 196
G T ++ ++
Sbjct: 343 GAPLPTVRSVLMTGMVMGAIMLDR 366
>gi|91977310|ref|YP_569969.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB5]
gi|91683766|gb|ABE40068.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB5]
Length = 764
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 71/391 (18%), Positives = 148/391 (37%), Gaps = 39/391 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F + L P P F +F++ ++ + +P + +
Sbjct: 376 VMVDRRAITFRTLAIAALVVLLIAPEALVHPS-FQMSFAATLGLVALVQI--GMPALFAT 432
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+S T +++ + A + + + HFH + YG+I+N+LA+P+
Sbjct: 433 PDSSTTAR----AALWGGREIMMLALASLVAGLATTPYAAFHFHRVTPYGVISNLLAMPV 488
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAGL+ + M LD + + +M G+D ++ +A ++ I
Sbjct: 489 VSVMVMPAGLLGLAAMPFGLDGVFWRIMEVGIDWMMIVALWVATLPGAIGKIAAFGSGPL 548
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + +L+ +T +R+ G I++ + P PD+LI+ G VAL +
Sbjct: 549 LLASLGIILLGLLRTPLRYGGLIIMMVATGWALLTPQ---PDILIAGDGRQVALRGADGR 605
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ S F +W +A P +E +
Sbjct: 606 LRVMQSGADHFKLKEWLAADADPRAADAASLREGVSCDAD-------------------- 645
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
CV +V + R D + C + ++I + + LI+ E+L+ G+
Sbjct: 646 -GCVAALADGALVALSFRADGVADDCARATLVIALAQPPPDC---AARLISAELLKDSGA 701
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
L + + I + + L PW+
Sbjct: 702 LALWRNRGGDGGF---VIEAARPKRLDRPWS 729
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + + ARL PP P PG +DF Y++GI+A G+ +
Sbjct: 180 LSVRKGTAP-AVGSFVSLKARLQPPLSPLRPGSYDFGRDLYFQGIAASGFALGAITAL-D 237
Query: 62 SESHNTWTWKKIS---SIKQSFLNEIRANIGTYGSASASIFLI 101
W + + ++ + IR ++G A A+ L
Sbjct: 238 PPGDGGWRLRYTAIMQGLRDAIDARIRMSLGGDQRAIATALLT 280
>gi|192291622|ref|YP_001992227.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris TIE-1]
gi|192285371|gb|ACF01752.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris TIE-1]
Length = 755
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 61/390 (15%), Positives = 136/390 (34%), Gaps = 39/390 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F + L P P F +F++ ++ + +P + +
Sbjct: 367 VMVDRRAITFRTLALAALVVLLIAPEALVHPS-FQMSFAATLGLVALVQI--GMPALFGA 423
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+S + + A + + HFH I YG+++N+ A+P+
Sbjct: 424 DDSSVAARV----ATWGGREIALLALASLVAGFATMPYAAYHFHRITPYGVLSNLAAMPV 479
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAGL+ + M LD + +M G+D +I +A ++ +
Sbjct: 480 VSAIVMPAGLLGLAAMPFGLDAPFWRIMELGIDWMILVAQWVAALPGAVGRVTAFGTGPL 539
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + +++ ++ +R G++ +G+ + P P++LI+ G VA+ +
Sbjct: 540 LVASLGIVMLGLLRSPLRWGGALGVGVAVAWAALTPQ---PEVLIAGDGRQVAVRGADGR 596
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ S +F +W +A + +
Sbjct: 597 LHLMQSGADAFRLKEWLAADADSRAPDAASLRAGVSCDPD-------------------- 636
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
CV +V + R D + C + ++IT + + +I + LQ G+
Sbjct: 637 -GCVTPLADGRLVALSLRPDGLADDCARAVLIITAGQPPPDC---AARVIGRDELQANGA 692
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
L + + PW
Sbjct: 693 LALRRSGSDPGLFVAD---ATRPRGPSRPW 719
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 12/150 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + + ARL PP P PG +DF Y++GI+A G+
Sbjct: 171 LSVKKGTAP-TVGSFVTLKARLQPPLQPLRPGSYDFARDLYFQGIAASGFVLGAMTT-AE 228
Query: 62 SESHNTWTWKK---ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYG 111
W + + ++ + IRA++G A A+ L I
Sbjct: 229 PPQDGGWRLRYAAVMQGLRDAIDARIRASLGGDPRAIATALLTGKRDAISTPVNDAMFIS 288
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSL 141
+ ++L+I V+ + L +L+L
Sbjct: 289 GLGHVLSISGYHMAVVAGVVFFALRALLAL 318
>gi|42520961|ref|NP_966876.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410702|gb|AAS14810.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 720
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 70/391 (17%), Positives = 135/391 (34%), Gaps = 52/391 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +KY A + P PG F +FS+ +++
Sbjct: 378 IMIERKYRGLIAIAFAASVILSVEPEAILKPG-FQMSFSAVLALVASYQI---------- 426
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
K+ IK S + + I +F+ + G+I N++AIPI
Sbjct: 427 -------NANKLFKIKIMKYFVSIMISSVIASLATVPYTIYNFNYFSISGIITNLVAIPI 479
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSF 180
++ ++IP G+I +LL+ L ++ I + +D I++I + I+ R P +S
Sbjct: 480 VTLIIIPLGIIYVLLIPLGVEWIIAPFIERPIDSILYITNAIASLQYLVIPIRTFPASSI 539
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I L + + N R G I + +F+ +PD+LI+ N+ A N L
Sbjct: 540 IIITFGLLWLCLWERNWRFFGIFFIVLG---IFSSAMYRTPDILINAD-NVAAKESDNLL 595
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
S +F+ W + + C
Sbjct: 596 YSLTRKNRNFVVKTWAKQNGQNQILNHKKYNNSDK-----------------RLKCND-Y 637
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
C+ ++ +V + +K+ I +C D+ I + +I L+ G+
Sbjct: 638 GCIYNKGNNKLVLLAYKKEDISENCDKVDLTIQLSEFDYSAC--NVKIIKHADLETYGTH 695
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ + + V+ + PW
Sbjct: 696 SVWLTSRYVKINTVRS---------NRPWHM 717
>gi|99080975|ref|YP_613129.1| ComEC/Rec2-related protein [Ruegeria sp. TM1040]
gi|99037255|gb|ABF63867.1| ComEC/Rec2-related protein [Ruegeria sp. TM1040]
Length = 672
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 66/384 (17%), Positives = 127/384 (33%), Gaps = 40/384 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A + L P F +FS+ + A + P
Sbjct: 326 VMLDRRAISVRAVALAAMLVLLRRPESLLS-AGFQMSFSATLALVVA--FQLLQPWFRPG 382
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + F HF+ I YGL+AN+ A+P+
Sbjct: 383 RGGVLGAAARW---------GLALLVSSLVAGLATAPFGAAHFNMISHYGLLANLAAVPV 433
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSF 180
+ VV+P ++AI L + + F +M+ G+ I+ +A ++ P
Sbjct: 434 MGAVVVPGAVLAICLAPIGASAVGFWIMSQGIAWILKVAETVATWPGARGHVVAPEAWIL 493
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+V L ++ + R G I I + L +P+S P++LIS G LV ++ +
Sbjct: 494 PVLVAGALWLLLWQGRFRWAGLIPIALA---LVVWPFSPRPEVLISADGGLVGVMTETGR 550
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + SF+ W +A ++
Sbjct: 551 ALSRPSGKSFVAGIWLENDGDGMDQARAYRRIP---------------------EGRDGK 589
Query: 301 FCVGCHRSDVIVGVLKRK--DMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQG 358
+ V VL + + SC +++I +I L +TP L++ G
Sbjct: 590 VQIFQSIGRRFVHVLGKTGLRAWQPSCARGEVIILSIEVEPP-AAGDCLWLTPRQLRETG 648
Query: 359 SLEITIIPPSNDNDKVKFIIKSAI 382
S+ + + SA
Sbjct: 649 SIAFAGNGAMITANGQARRLWSAP 672
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 40/220 (18%), Positives = 80/220 (36%), Gaps = 8/220 (3%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+ + P P + + A LSPP GPA PG FDF +++ G+ A+G YS ++ +
Sbjct: 138 ISLFEGSAPMP-GSWVMTTANLSPPQGPAEPGGFDFRRHAWFLGLGAVG--YSRVPVLRT 194
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP---VYGLIANILA 118
+ + + + A+ G +A + + +A++LA
Sbjct: 195 GPPEVLPVATLRAQLSERVRAAMPADTGGVATALMTGDRAHVPRQVTENLRASNLAHLLA 254
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
I L + + A L +L + W + + ++ G T
Sbjct: 255 ISGLHMGLFAGVVFASLRRCFALCPPI--ALRWPVKKLSAAVALVASFGYLLLSGANVAT 312
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
++V +L+ + +++L P S
Sbjct: 313 ERAFLMVAVMLVAVMLDRRAISVRAVALAAMLVLLRRPES 352
>gi|319899025|ref|YP_004159118.1| Competence protein [Bartonella clarridgeiae 73]
gi|319402989|emb|CBI76544.1| Competence protein [Bartonella clarridgeiae 73]
Length = 757
Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 75/380 (19%), Positives = 145/380 (38%), Gaps = 38/380 (10%)
Query: 16 TIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I G+ ++ P P F +FS+ I++ ++ + + K
Sbjct: 408 AIAGLITMAVSPHEILGPS-FQMSFSATAALIASFCWWSDGRFSYKGNTVSSYIKGKIFR 466
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + ++ I+ HF + + G+I+N LA+PI+S +IP GLI+
Sbjct: 467 FV--FLSIVLTCMSSLIAGFASGIYAAYHFSNVALLGVISNTLALPIVSIFIIPFGLISA 524
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
M L+ +P +M +G ++I IA+ + G IP ++ + + + + + F K
Sbjct: 525 FAMFFGLEWLPLKIMGFGTSLMIKIAYAVKAISPVLNPGFIPLSALILLSIGLVGLTFLK 584
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T IR S I I++ L+I++ +V +++ + L + +P F S
Sbjct: 585 TAIRFFFSFFILGGILVCM---MQSPVQLIIADNMKIVGVLNNDILYIDRYHPSKFTTSI 641
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
W+ + P L +F+C C + + +
Sbjct: 642 WEKSFRINKTIKPTKVGPSLN----------------GQFICDDN-ICTTLLENGFKIAI 684
Query: 315 LKRKDMIRLSCQLSDILITTIRDIN-TKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
L R+ C +DI+I N T ++ TP+ L +GS+ +T +
Sbjct: 685 LYRE---TDHCVKADIIIRKFTTSNQTCNAINAITFTPQQLLSRGSVILTKNKNTF---- 737
Query: 374 VKFIIKSAIENLHFPWTKHR 393
+ + PW HR
Sbjct: 738 ------WSSAGFYRPWNIHR 751
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 81/235 (34%), Gaps = 20/235 (8%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI--YSSESHNTWTWK 71
+ G +L SG PG +DF+F +Y+K I A G++ P I + + +
Sbjct: 210 GDGLYGKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGKPTKILVFQPNTMLGRILQ 269
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSF 124
KI +++ +I + ++ + I +A+IL+I L
Sbjct: 270 KIENLRMQMTQKIIKVVNGEEGRVSAALITGQRGGISNNTNEALRIAGLAHILSISGLHM 329
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMA----WGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++ + I+ + + + + +I A + V +
Sbjct: 330 ALLSGMVFIIVRSFFAFFPVFSSYYSAKKFAAIAALIVTAFYL-VLSGANIAAQRS---- 384
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP--YSFSPDLLISEKGNLVA 233
+V L+ + C + + + I I + + S + S L+A
Sbjct: 385 FLMVAVMLIAILCNRSAMTMRNFAIAGLITMAVSPHEILGPSFQMSFSATAALIA 439
>gi|86749927|ref|YP_486423.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris HaA2]
gi|86572955|gb|ABD07512.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris HaA2]
Length = 764
Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 75/390 (19%), Positives = 142/390 (36%), Gaps = 39/390 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F + L P P F +F++ ++ + +P + +
Sbjct: 372 VMVDRRAITFRTLAIAALVVLLIAPEALVHPS-FQMSFAATLGLVALVQI--GMPALFAT 428
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++S T +++ + A + + + HFH + YG+IAN+LA+P+
Sbjct: 429 ADSSTTAR----AALWGGREIAMLALASLVAGLATTPYAAYHFHRVTPYGVIANLLAMPV 484
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S VV+PAGL+ + M LD + + +M G+D +I +A ++ I
Sbjct: 485 VSVVVMPAGLLGLAAMPFGLDGVFWRIMEIGIDWMIVVALWVAALPGAIGRIAAFGTGPL 544
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + +L+ +T +R+ G ++ P PD+LI+ G VAL +
Sbjct: 545 LLASLGIVLLGLLRTPLRYGGLALLAFATGWALLTPQ---PDILIAGDGRQVALRGPDGR 601
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ S SF QW +A P +E +
Sbjct: 602 LRLMQSGGDSFRVKQWLAADADPRAVDAASLREGVSCDAD-------------------- 641
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
CV +V + R D I C + ++I + + LI+ E+L +
Sbjct: 642 -GCVAALADGGLVALSFRADGIGDDCARAKLVIALAQPPPDC---AARLISTEMLAGSAA 697
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
L + P D PW
Sbjct: 698 LALRRHP---AGDGEFVTEAVRPIARDRPW 724
>gi|39935969|ref|NP_948245.1| ComEC/Rec2-like protein [Rhodopseudomonas palustris CGA009]
gi|39649823|emb|CAE28345.1| possible DNA uptake protein, ComEC [Rhodopseudomonas palustris
CGA009]
Length = 755
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 62/390 (15%), Positives = 138/390 (35%), Gaps = 39/390 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F + L P P F +F++ ++ I +P +
Sbjct: 367 VMVDRRAITFRTLALAALVVLLIAPEALVHPS-FQMSFAATLGLVALIQI--GMPALFAQ 423
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++S ++ + A + + HFH I YG+++N+ A+P+
Sbjct: 424 ADSSTAARV----ALWGGREIALLALASLVAGFATMPYAAYHFHRITPYGVLSNLAAMPV 479
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAGL+ + M LD + +M G+D +I +A ++ +
Sbjct: 480 VSAIVMPAGLLGLAAMPFGLDAPFWRIMELGIDWMILVAQWVASLPGAVGRVTAFGTGPL 539
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + +++ ++ +R G++ +G+ + P P++LI+ G VA+ +
Sbjct: 540 LVASLGIVMLGLLRSPLRWGGALAVGVAVAWAALTPQ---PEVLIAGDGRQVAVRGADGR 596
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ S +F +W +A + +
Sbjct: 597 LHLMQSGADAFRLKEWLAADADSRAPDAASLRAGVSCDPD-------------------- 636
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
CV +V + R D + C + ++IT + + +I + LQ G+
Sbjct: 637 -GCVTPLADGRLVALSLRPDGLADDCARAVLIITAGQPPPDC---AARVIGRDELQANGA 692
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
L + + + PW
Sbjct: 693 LALRRSGSDPGLFVAE---ATRPRGPSRPW 719
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 10/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--I 59
LS+ K P + + ARL PP P PG +DF Y++GI+A G+
Sbjct: 171 LSVKKGTAP-TVGSFVTLKARLQPPLQPLRPGSYDFARDLYFQGIAASGFVLGAITTTEP 229
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ ++ + IRA++G A A+ L I
Sbjct: 230 PQDGGWRLRYAAVMQGLRDAIDARIRASLGGDPRAIATALLTGKRDAISTPVNDAMFISG 289
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+ ++L+I V+ + L +L+L
Sbjct: 290 LGHVLSISGYHMAVVAGVVFFALRALLAL 318
>gi|319407357|emb|CBI81004.1| Competence protein [Bartonella sp. 1-1C]
Length = 754
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 73/380 (19%), Positives = 144/380 (37%), Gaps = 38/380 (10%)
Query: 16 TIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I G+ ++ P P F +FS+ I+A ++ + + + K +
Sbjct: 408 AIAGLVTVAISPHEILEPS-FQMSFSATVALIAAFSWWSEGYCSCKGNTAPSYIGGKVLR 466
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ +++ I+ HF + + G+I+N LA+PI+S ++P GL++
Sbjct: 467 FV--FLSVVSTCMSSLVAGSASGIYAAYHFSNVALLGVISNALALPIVSIFIMPFGLLSA 524
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
M L+ P +M +G +++I IA+ I G IP ++ + + + + + F K
Sbjct: 525 FSMFFGLEWWPLQIMGFGTNLMIKIAYAIQAISPVLNPGFIPLSALILLSIGLVGLTFLK 584
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T IR I I++ L+I++ +V +++ L + +P F S
Sbjct: 585 TAIRLFFGFFILGGILVCM---MQSPVQLIIADNMKIVGVLNDKILYVDRYHPSKFTISL 641
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
W+ + P L+ +F+C C + + +
Sbjct: 642 WEKSFRINKTIKPTKIGPSLK----------------GQFICDD-KICTTLLENGFKIAI 684
Query: 315 LKRKDMIRLSCQLSDILITTIRDIN-TKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
L + C +DI+I N T ++ T + L +GS+ +T
Sbjct: 685 LYGE---TDHCVKADIIIKKHATSNETCDSINAITFTSQQLLSRGSVILTKNKN------ 735
Query: 374 VKFIIKSAIENLHFPWTKHR 393
I + + PW HR
Sbjct: 736 ----ILWSSAGFYRPWNTHR 751
Score = 77.5 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 86/234 (36%), Gaps = 18/234 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS--SESHNTWTWK 71
+ G +L SG PG +DF+F +Y+K I A G++ PK I + +
Sbjct: 210 GDGLYGKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGKPKKISVFQPDMMLGKVLQ 269
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSF 124
KI +++ ++ +G G ++ + I +A+IL+I L
Sbjct: 270 KIENLRMQMTEKVIKTVGGEGGKVSAALITGQRGGISHNTSEALRIAGLAHILSISGLHM 329
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMA----WGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++ + I+ + + + + +I A + + + SF
Sbjct: 330 ALLSGMVFIIIRSFFAFFPVFSSYYSVKKFAAIAALIVTAFYL-ILSGANI---AAQRSF 385
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF-PYSFSPDLLISEKGNLVA 233
+ + V + ++ ++ + + G+ + + S + S L+A
Sbjct: 386 LMVAVMLVAILCNRSAVTMRNFAIAGLVTVAISPHEILEPSFQMSFSATVALIA 439
>gi|209885103|ref|YP_002288959.1| competence protein [Oligotropha carboxidovorans OM5]
gi|209873299|gb|ACI93095.1| competence protein [Oligotropha carboxidovorans OM5]
Length = 709
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 61/390 (15%), Positives = 140/390 (35%), Gaps = 43/390 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F + L P P F +F++ + + +P
Sbjct: 326 VMVDRRAITFRTLALAAMLVLLIAPEALVHPS-FQMSFAATLALV--MLAQNGLPGWFTD 382
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + A + + + HFH I YG+IAN++A+P+
Sbjct: 383 NDGALGRFAAW-----GGRELFVLAAASFVAGLATTPYAAFHFHRIAPYGVIANLVAMPV 437
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAGL+ I+ + LD++ + +M G+D +I ++ + F + S
Sbjct: 438 VSVLVMPAGLLGIVAIPFGLDSLFWQLMDVGIDWMIAVSQWVVALPGAFGRVHAFGVGSL 497
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I +++ +T +R G+ +IG + + PD+LI+ VA+ ++
Sbjct: 498 LVISAGIIVLGLLRTPLRWAGAALIGGG---ILLAAQATPPDVLIARDAASVAVRGRDGQ 554
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ + +F+ +W +A +
Sbjct: 555 LRIMPTAKNAFVAREWLAADADARVTTDPSLTLGVSC---------------------DA 593
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ CV + +V + + + C + I++T+ + + + L++ G
Sbjct: 594 TGCVVEGKGGDLVALAHWPEALTDDCARAKIIVTSHAVPADC---AARIFDRDSLRQLGG 650
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + +I + L PW
Sbjct: 651 MALVRTDDGY------RMIAGEPQGLDRPW 674
Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 10/150 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + ARL PP P PG +DF Y++G+ A G+ K+ +
Sbjct: 130 LSVRKGTAP-AVGQYVALKARLLPPLRPLRPGGYDFARDMYFQGLGASGFVLGAIKLTDA 188
Query: 62 SESHNTWT--WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ + W + ++ IR + A A+ L I
Sbjct: 189 PQEGDLMLRYWTAVQGMRDGVDARIRTVLSGDERAIATALLTGRRDAISAPVNDALFVSG 248
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLD 142
+ ++L+I V+ + + +L+L
Sbjct: 249 LGHVLSISGYHMAVVAGVVFFAIRALLALS 278
>gi|299134984|ref|ZP_07028175.1| ComEC/Rec2-related protein [Afipia sp. 1NLS2]
gi|298589961|gb|EFI50165.1| ComEC/Rec2-related protein [Afipia sp. 1NLS2]
Length = 757
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 61/390 (15%), Positives = 147/390 (37%), Gaps = 42/390 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ ++ F + L P P F +F++ + + +P+ +
Sbjct: 371 VMADRRAITFRTLALAAMLVLLIAPEALVHPS-FQMSFAATLGLV--VLAQIGMPQWFAA 427
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S+ N + + A + + + HFH I YG+IAN++A+P+
Sbjct: 428 SDDSNLGR----FAAWGGRELVVLALASFVAGLATTPYAAFHFHRIAPYGVIANLVAMPV 483
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAGL+ I+ + D++ + +M G+D +I ++ ++ F +
Sbjct: 484 VSVLVMPAGLLGIVAIPFGFDSLFWHLMGVGIDWMIFVSQWVAALPGAFGRVHAFSIGPL 543
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + +++ ++ +R G +IG ++ PD+LI+ + VA+ K++
Sbjct: 544 IVMSGGIVVLGLLRSPLRWAGVGLIGCGVVWAAVVTE---PDILIARDASSVAVRGKDSR 600
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ ++ F++ +W +A P + + +
Sbjct: 601 LRIMHTAKNVFVWREWLAADADPRAVTDPSIAQGVSC---------------------DE 639
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ CV + ++ + ++ + + C + ILIT + + + + L+ G
Sbjct: 640 AGCVVEGKEGDLIALTRQPEALVDDCAQAKILITPYQTPADC---AARVFYRDDLRGLGG 696
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + + E + PW
Sbjct: 697 VALKRTAQGYSITMSEP------EGVDRPW 720
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 12/152 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + + ARL PP P PG +DF Y++ I A G+ +
Sbjct: 175 LSVRKGTAP-AVGSYVTLKARLLPPLRPLRPGGYDFARDMYFQCIGASGFVLGTIRT-QD 232
Query: 62 SESHNTWTWKK---ISSIKQSFLNEIRANIGTYGSASASIF-------LIKHFHCIPVYG 111
+ W + + ++ + IR + A A+ + +
Sbjct: 233 TPKQGDWRLRYAALMQGLRDAVDARIRTVLSGDQRAIATALLTGRRDAISTTNNDALFVS 292
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ ++L+I V+ + + +L+L
Sbjct: 293 GLGHVLSISGYHMAVVAGVVFFAIRALLALSP 324
>gi|56697020|ref|YP_167382.1| competence protein [Ruegeria pomeroyi DSS-3]
gi|56678757|gb|AAV95423.1| competence protein [Ruegeria pomeroyi DSS-3]
Length = 676
Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 59/388 (15%), Positives = 134/388 (34%), Gaps = 55/388 (14%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ A I + P PG F +F++ ++ G+ E
Sbjct: 336 VDRRALSMRAVAMAALIVLVLRPEALLGPG-FQMSFAATVALVAVFGWLR---------E 385
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + ++ + ++ + + HF+ + YGL+AN++++P++
Sbjct: 386 AEIGLGPRWLNPVAGVVIS------SAVAGLATAPIGAAHFNTLAHYGLVANLMSVPLMG 439
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS-FVT 182
VVIPA ++A++L L LD I VM GL I+ +A ++ P+
Sbjct: 440 LVVIPAAVLALVLAPLGLDWIGLEVMGLGLRWILGVADWVAGMDGARGYVMRPDWVVLPI 499
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + L +V + R G ++ + + + P +LI++ G LV ++ +
Sbjct: 500 LTLGALWLVLWRGRARLAGVPVMAAAF---WLWSGAERPGVLIADTGGLVGVMTETGRAL 556
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ FI W + + ++ +
Sbjct: 557 SKPRGAGFIAGVWLENDGDGADQMAAAARWPGEDMLRK---------------------- 594
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+ +++ KR C + ++++ + + + P+ L G+L I
Sbjct: 595 IRVGEVEIVHVTGKRAAQGLSDCDRAQLIVSAVPL---AVNGPCEVYDPKRLALTGALSI 651
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWT 390
K + +A + W
Sbjct: 652 ----------GPKGVESAAHLSGRRLWN 669
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 85/236 (36%), Gaps = 20/236 (8%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ I A LSPP GP PG FDF ++++G+ AIG Y+ ++ + + +
Sbjct: 153 GSRIMTTAYLSPPQGPVEPGGFDFRRHAWFQGLGAIG--YTRVPVLLARPPDRSERDMSV 210
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVV 126
+++ + IRA + A+ + L +A++LAI L +
Sbjct: 211 FTLRMAASAHIRARLPGDVGGFAAAVTTGDRSGVSQGALDALRASNLAHLLAISGLHMGL 270
Query: 127 IPAGLIAILLMILSLDNIPFGVM----AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+ + L + LSL + L + A ++++ R
Sbjct: 271 LAGFVFTALRVALSLIPPLALRLPVRKLAALGALAVAAGYLALSGGNVATQRA-----FV 325
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF--PYSFSPDLLISEKGNLVALVD 236
+V L V + ++ + I+++ + + LVA+
Sbjct: 326 MVAVMLCAVLVDRRALSMRAVAMAALIVLVLRPEALLGPGFQMSFAATVALVAVFG 381
>gi|126735651|ref|ZP_01751396.1| competence protein, putative [Roseobacter sp. CCS2]
gi|126714838|gb|EBA11704.1| competence protein, putative [Roseobacter sp. CCS2]
Length = 720
Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 66/391 (16%), Positives = 138/391 (35%), Gaps = 48/391 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ A + L P PG F +F++ ++ G
Sbjct: 347 LGRRALTLRAVAMAAILVLLWQPEALIGPG-FQMSFAATTALVAVFGALRR--------- 396
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + ++ L+ + + + + F HF+ I YGLIAN+L++P++
Sbjct: 397 ----FDFSRWPRWSRAILSVVLS--SFIAGLATAPFAAAHFNQIAHYGLIANVLSVPLMG 450
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFVT 182
+V+PA ++A+ L L +I +M GL I+ +A +S P+
Sbjct: 451 VLVMPAAVLAVCLAPFGLWSIGLWLMEIGLRWILFVAATVSAREGALGHVWAPDWYVLPI 510
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + L +V + G++ I + + P LLI++ G+L+ L I
Sbjct: 511 LSLGLLWIVLVAGRGKIAGAL---AVICAGVLWHQTERPALLIADSGSLIGLSGAEGRIL 567
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ F+ W P + ++ L+ + + ++ +
Sbjct: 568 SKPTGNGFVAGIWLENDGAPVPQVQAASRDGLRVQGRVIAADL-------------GDWR 614
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
V K + C +D+LI+ D + C L+ + G+L +
Sbjct: 615 VLQVSG-------KTALADLVGCDGADVLISNQVDAGARPC---LVYDVARFRNTGALAL 664
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
I + I + + PW +
Sbjct: 665 NIAANGDL-----LIETAHHVSGQRPWNSRQ 690
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/319 (15%), Positives = 101/319 (31%), Gaps = 16/319 (5%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ F + LSPP+GPA PG FDF +++ + A+GY + +
Sbjct: 155 DQPLQSFTPGDVLILTGHLSPPAGPAEPGGFDFQRHAWFLQLGAVGYTRTPVLRLSVPND 214
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANIL 117
+ ++ +++ + ++ + A A+ + I L +A++L
Sbjct: 215 PD--IGTRLFAMRMAISQAVQKAMPGEPGAFAAAIMTGDRSAIGQATLTDLRTSNLAHLL 272
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIP 176
AI L ++ + A + L IP + W I I A + + G +
Sbjct: 273 AISGLHMGLLTGFIFAFVRY--GLALIPGVALRWPTKKIAAICALCVGAFYLALSGGSVS 330
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY--SFSPDLLISEKGNLVAL 234
+V + V + ++ + +++L+ + + LVA+
Sbjct: 331 TERAYIMVAVMFVAVLLGRRALTLRAVAMAAILVLLWQPEALIGPGFQMSFAATTALVAV 390
Query: 235 VDKNTLISNY--SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
I S S+ I AP Q + + +L
Sbjct: 391 FGALRRFDFSRWPRWSRAILSVVLSSFIAGLATAPFAAAHFNQIAHYGLIANVLSVPLMG 450
Query: 293 KFLCIKKSFCVGCHRSDVI 311
+ V +
Sbjct: 451 VLVMPAAVLAVCLAPFGLW 469
>gi|154253618|ref|YP_001414442.1| ComEC/Rec2-like protein [Parvibaculum lavamentivorans DS-1]
gi|154157568|gb|ABS64785.1| ComEC/Rec2-related protein [Parvibaculum lavamentivorans DS-1]
Length = 718
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 66/380 (17%), Positives = 133/380 (35%), Gaps = 38/380 (10%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ L P +F + + A+ FY M + + ++
Sbjct: 371 AALVILLWRPDSLIG-----ASFQMSFAAVIALIAFYESSWMRSWTSRPRATGLGALPAL 425
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
S++ I A+ HF+ I +YGL N+ A+P++ VV+P L+++LL
Sbjct: 426 AGSYVLGIALT-SIVAGAATGAIAAYHFNRIALYGLAGNMAAMPLVGIVVMPMALLSLLL 484
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
M LD M G++ ++ +AH ++ + + P + + +V+ L + +
Sbjct: 485 MPFGLDGPALWAMGKGVEGMLLVAHEVASWNGADRLVPEAPLGALLLVVLGSLWLALWRE 544
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
R G + + L + + PD+LI L A+ N ++ S+ P++ QW
Sbjct: 545 KWRFAGIVPMVAG---LALWGAASRPDVLIDRDAALFAVRTANGSLALTSSRPAYAAEQW 601
Query: 256 KSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
+ E L + C+ ++
Sbjct: 602 LRHDGDGRRPREASKSEALAC---------------------DRHGCIYKEEGRPVIAFA 640
Query: 316 KRKDMIRLSCQLSDILIT--TIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
D + C +DI+I ++ + C+ LL+ + G+ +T
Sbjct: 641 GTLDAVVEDCAKADIVIAKISVPYRIRRECDARLLLDYFSFWRNGATALTFTESGGI--- 697
Query: 374 VKFIIKSAIENLHFPWTKHR 393
+ S + PW + R
Sbjct: 698 --DVTTSLAARGNRPWVQRR 715
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 82/242 (33%), Gaps = 29/242 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+ + + ARL PP P PG FD+ +++ G+ A+G+ Y++P+ +
Sbjct: 164 ISVRLRGAVLRPGAVVTLRARLMPPPEPVQPGGFDYARQAWFDGMGAVGFAYTLPEELSP 223
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIF-----------------LIKHF 104
+ ++ ++ IR+ +G A A+ F
Sbjct: 224 PSGRDRAV---LADLRMRIGERIRSVVGGTSGAVAAALINGERASIPDDVSEDLRAAGIF 280
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
H + + GL + A + V L + + + +G + I+
Sbjct: 281 HVLSISGLHMVLFAGSVFWVVRAALALWPSMALRYPIKKWAAAAALFGATFYLLISGAAI 340
Query: 165 VAHNEFCIGRIPETSFVT---------IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ + + + + +++ L+++ + + S + +I
Sbjct: 341 ATQRAWIMISLMFLAILLDRPALTMRNVMLAALVILLWRPDSLIGASFQMSFAAVIALIA 400
Query: 216 PY 217
Y
Sbjct: 401 FY 402
>gi|163746570|ref|ZP_02153928.1| competence protein, putative [Oceanibulbus indolifex HEL-45]
gi|161380455|gb|EDQ04866.1| competence protein, putative [Oceanibulbus indolifex HEL-45]
Length = 522
Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 62/392 (15%), Positives = 138/392 (35%), Gaps = 58/392 (14%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L I ++ A I P PG F +F++ ++ G+
Sbjct: 181 LMIGRRAISLRAVGVAGIIVLALRPEALMGPG-FQMSFAATTALVAVFGWMR-------- 231
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ +++ + ++ + + HF+ + YGL+AN+L++P+
Sbjct: 232 -DFEGEVIPRRLRPVAAVVIS------SAVAGFATAPISAAHFNTVSHYGLVANLLSVPL 284
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSF 180
+ +VIPA ++A+L+ L+ IP M GL I+ +A +S P
Sbjct: 285 MGVLVIPAAVLAVLIAPFGLEGIPLWAMGLGLRWILFVAEGVSNLPGARSFVPGPGGWVL 344
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + FL ++ + ++R +G ++ +++I + + PD+L+++ G LV ++
Sbjct: 345 PLLALGFLWLLIWQGSLRWLGCPVMVLSLI---VWQATTRPDVLVADTGTLVGIMTAEGR 401
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ FI W +++ +
Sbjct: 402 ALSREKGAGFIARNWLENDGDGVNQSVAAARW---------------------------- 433
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ + +I KR C+ +I+I +++ + P L++ G+L
Sbjct: 434 ---VKNTTGIIHLSGKRAVAAFRDCRRGEIVIASVQMEPD-PAWNCRVFDPIQLRETGAL 489
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ +P I + W
Sbjct: 490 ALWKMPKGWH------ITTAKEHAGARLWNSR 515
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 85/234 (36%), Gaps = 20/234 (8%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ A LSPP+GP PG FDF +++ G+ A+GY ++ ++ +
Sbjct: 2 RVMTTAHLSPPAGPVEPGGFDFQRHAWFAGLGAVGYAR--VPLLGIAKPTEGELSLLLFR 59
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSF---- 124
++ + +R ++ A+ I L +A++LAI L
Sbjct: 60 LRMAASARVRHHLPGDIGGFAAAITTGDRSAISQQALQDLRSSNLAHLLAISGLHMGLLS 119
Query: 125 -VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
VV + + L ++ P +A G + I ++++ R ++V
Sbjct: 120 AVVFSGLRLILALHPVTATRWPSRSIAAGAAL-IAATGYLALSGGNVATER----AYVMC 174
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP-YSFSPDLLISEKGNLVALVD 236
V ++ + I + GI ++ L + + LVA+
Sbjct: 175 AVALCALMIGRRAISLRAVGVAGIIVLALRPEALMGPGFQMSFAATTALVAVFG 228
>gi|319404353|emb|CBI77953.1| Competence protein [Bartonella rochalimae ATCC BAA-1498]
Length = 754
Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats.
Identities = 72/380 (18%), Positives = 143/380 (37%), Gaps = 38/380 (10%)
Query: 16 TIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I G+ ++ P P F +FS+ I+A ++ + + + K +
Sbjct: 408 AIAGLVTVAISPHEILEPS-FQMSFSATVALIAAFSWWSDGYCSCKGNTAPSYIGGKVLR 466
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ +++ I+ HF + + G+I+N LA+PI+S ++P GL++
Sbjct: 467 FV--FLSVVSTCMSSLVAGSASGIYAAYHFSNVALLGVISNALALPIVSIFIMPFGLLSA 524
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
M L+ P +M +G +++I IA+ I G IP ++ + + + + + F K
Sbjct: 525 FSMFFGLEWWPLQIMGFGTNLMIKIAYAIQAISPVLNPGFIPLSALILLSIGLVGLTFLK 584
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T IR I I++ L+I++ +V +++ L + +P F S
Sbjct: 585 TAIRLFFVFFILAGILVCM---MQSPVQLIIADDMKIVGVLNDKILYVDRYHPSKFTISL 641
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
W+ + P L+ +F+C C + + +
Sbjct: 642 WEKSFRINKTIKPTKIGPSLK----------------GQFICDD-KICTTLLENGFKIAI 684
Query: 315 LKRKDMIRLSCQLSDILITTIRDIN-TKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
L + C +DI+I N T ++ T + L +GS+ +T
Sbjct: 685 LYGE---TDHCIKADIIIKKHATSNETCDSINAITFTSQQLLSRGSVILTKNKS------ 735
Query: 374 VKFIIKSAIENLHFPWTKHR 393
+ + PW HR
Sbjct: 736 ----TLWSSAGFYRPWNIHR 751
Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 87/234 (37%), Gaps = 18/234 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS--SESHNTWTWK 71
+ G +L SG PG +DF+F +Y+K I A G++ PK I + +
Sbjct: 210 GDGLYGKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGKPKKISVLQPDMMLGKVLQ 269
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLI-------KHFHCIPVYGLIANILAIPILSF 124
KI +++ +I +G G ++ + + + +A+IL+I L
Sbjct: 270 KIENLRMQMTEKIVKAVGGEGGRVSAALITGQRGGISHNTNEALRIAGLAHILSISGLHM 329
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMA----WGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++ + I+ + + + + +I A + + + SF
Sbjct: 330 ALLSGMVFIIIRSFFAFFPVFSSYYSVKKFAAIAALIVTAFYL-ILSGANI---AAQRSF 385
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF-PYSFSPDLLISEKGNLVA 233
+ + V + ++ ++ + + G+ + + S + S L+A
Sbjct: 386 LMVAVMLVAILCNRSAVTMRNFAIAGLVTVAISPHEILEPSFQMSFSATVALIA 439
>gi|83953841|ref|ZP_00962562.1| competence protein [Sulfitobacter sp. NAS-14.1]
gi|83841786|gb|EAP80955.1| competence protein [Sulfitobacter sp. NAS-14.1]
Length = 682
Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 62/390 (15%), Positives = 130/390 (33%), Gaps = 54/390 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L I ++ A I + P PG F +F++ ++ G+ + +
Sbjct: 337 LIIGRRALTLRAVAIAATIVLVLRPEALTGPG-FQMSFAATTGLVAIFGWLRNAEVSLGP 395
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S++ F + HF+ I YGLIAN+L++P+
Sbjct: 396 KWLAPAVATVISSAVAGGF---------------TAPIGAAHFNTIAQYGLIANLLSVPL 440
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSF 180
+ +V+PA + A+++ L L+ IP VM GL I+ +A ++ P
Sbjct: 441 MGVLVMPAAVAALVMAPLGLEWIPLQVMGAGLRWILLVAQGVAEIDGAQGHVAAPGPWVL 500
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + FL ++ + +R G G I + + P +LIS+ G+LV ++
Sbjct: 501 PLLALGFLWVLLWQGWLRFAGL---GAVIAAGVLWHGAERPTVLISDTGSLVGVMTPTGR 557
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + F+ W + + ++ K
Sbjct: 558 ALSKAKGAGFVALNWLENDGDGADQDRAAARWPIRPK----------------------- 594
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
++ + ++ +D +I + L + P+ L+ G++
Sbjct: 595 -----IGGREVIHLSGKRARAAFGACRADQIIALSVVPDPPLTGGCDVFDPDRLRSTGAV 649
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+++ + WT
Sbjct: 650 ALSLDNGRVTMQTARQK------AGARLWT 673
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 87/233 (37%), Gaps = 14/233 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ LSPPSGP P FDF +++ G+ A+G YS ++ ++ + +
Sbjct: 156 GLGVMTTGHLSPPSGPVEPEGFDFQRHAWFAGLGAVG--YSRTPLLAATPAGAGHGGLAV 213
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVV 126
+ + I+ + A+ I L +A++LAI L +
Sbjct: 214 FRARMAASARIQRILPGDIGGFATAITTGDRSAISQDALQDLRASNLAHLLAISGLHMGL 273
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG--RIPETSFVTIV 184
+ A + L ++L+L +P+ + W I ++ + G E +F+ +
Sbjct: 274 LSAVVFGALRIVLTL--VPWIALRWPTRSIAAAGALVAASGYLLLSGGNVATERAFIMVA 331
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS-FSPDLLISEKGNLVALVD 236
V ++ + + + +++L + + + LVA+
Sbjct: 332 VALGALIIGRRALTLRAVAIAATIVLVLRPEALTGPGFQMSFAATTGLVAIFG 384
>gi|316933938|ref|YP_004108920.1| ComEC/Rec2-like protein [Rhodopseudomonas palustris DX-1]
gi|315601652|gb|ADU44187.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris DX-1]
Length = 754
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/391 (16%), Positives = 142/391 (36%), Gaps = 41/391 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ F I L P P F +F++ ++ + +P +
Sbjct: 367 VMVDRRAITFRTLALAALIVLLIAPEALLHPS-FQMSFAATLGLVALVQV--GMPALFAK 423
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++S T +++ + + + HFH I YG+++N++A+P+
Sbjct: 424 ADSSATAR----AALWGGREIALLLLASLVAGLATMPYGAYHFHRITPYGVLSNLVAMPV 479
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+S +V+PAG++ + M LD + +M G+D +I +A ++ +
Sbjct: 480 VSAIVMPAGMLGLAAMPFGLDAPFWRIMEIGIDWMIVVAQWVAALPGAVGRVTAFGAGPL 539
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + +L+ +T +R G + + I P P++LI+ G VA+ +
Sbjct: 540 LVASLGLVLIGLLRTPLRWGGLLGLIAAIGWAALTPQ---PEVLIAGDGKQVAVRGADGR 596
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ S +F +W +A + +
Sbjct: 597 LHLMQSGADAFRLKEWLAADADARPPDAASLRAGVSC---------------------DS 635
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
CV +V + R D + C + +++T + + I + LQ G+
Sbjct: 636 DGCVTALADGRLVALSLRPDGLADDCARAVLIVTAGQPPPGC---AARTIGRDELQSNGA 692
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENL-HFPW 389
+ + D ++F+ + A + PW
Sbjct: 693 MALRRS----AADPMQFVTEPARPSGSSRPW 719
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 12/144 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + + ARL PP P PG +DF Y++GI+A G+
Sbjct: 171 LSVRKGTAP-AVGSFVTLKARLQPPLQPLRPGSYDFARDLYFQGIAASGFVLGAIAT-AE 228
Query: 62 SESHNTWTWKK---ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYG 111
W + + ++ + IRA++G A A+ L I
Sbjct: 229 PPQDAGWRLRYAAVMQGLRDAIDARIRASLGGDVRAIATALLTGKRDAISTPVNDAMFVS 288
Query: 112 LIANILAIPILSFVVIPAGLIAIL 135
+ ++L+I V+ + L
Sbjct: 289 GLGHVLSISGYHMAVVAGVVFFAL 312
>gi|254469565|ref|ZP_05082970.1| competence protein [Pseudovibrio sp. JE062]
gi|211961400|gb|EEA96595.1| competence protein [Pseudovibrio sp. JE062]
Length = 859
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 62/366 (16%), Positives = 143/366 (39%), Gaps = 15/366 (4%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG F +F + +SA + + + T + K +
Sbjct: 465 PEEVLSPG-FQMSFIAVLALLSAYSFGKDWLRDDREAYVLKGKTGVLRTLKKPAKWLFAC 523
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A A+ + HF I YG++ N+LA+P+++FVV+P GL+A+L + L D
Sbjct: 524 AMTSLIAGAATAPIAAMHFEQIAPYGVVGNVLAMPLVTFVVMPLGLLALLTIPLGADAFF 583
Query: 146 FGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
M GL +++ A+ +S +G + ++ +++ +++ ++ + +
Sbjct: 584 LQGMEVGLSLVLKAAYWVSALSDGLTNLGVASVSGYLLVILASIILCIMPLRLKWLSVPV 643
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
+I PD++I++ G + ++ S+ SF A +
Sbjct: 644 FAAGLIGFVV---ERPPDVMIADAGKHIGFYGEDGSFRLTSSRISFAADSLLRAGGYSAN 700
Query: 265 EAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS 324
+ + ++ P + + + V++ K + +++
Sbjct: 701 SFKEHKTRAADRSCDEEG--CVLALYPHRAIGGGGE-----QKPSVVLAQSKVEGVLKAD 753
Query: 325 CQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
CQL+ I++T + ++ L++ + ++GS+ I + + K+K ++ A +
Sbjct: 754 CQLASIIVTQAQAPSSCNAE--LVLDQKTFGERGSVYIWLSDQAESGHKIK-KVRWAYDA 810
Query: 385 LHFPWT 390
PW
Sbjct: 811 QRRPWN 816
Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 16/200 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ + ++ ARL PP G PG +DF ++++ GI A+GY S P M+
Sbjct: 247 LSLKGMKEAPVMGDKMQLKARLLPPGGAVRPGGYDFARTAFFDGIGAVGYALSRPVMLAR 306
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI---------FLIKHFHCIPVYGL 112
T + + +I+ IR + ++ ++ + GL
Sbjct: 307 DGG--TGFLQHVDTIRSGIAGRIRRVLDYSPESAFAVALLVGKRDYLASADKDALRNAGL 364
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA----WGLDIIIHIAHRISVAHN 168
A++LAI + ++ + + ++LSL + +I + ++
Sbjct: 365 -AHVLAISGMHMGLVTSLVFLAARLVLSLSQSLALKGHIHVYASIAALIAATVYLGLSGA 423
Query: 169 EFCIGRIPETSFVTIVVEFL 188
R + + + L
Sbjct: 424 SVATQRAYLMAVLILCAGLL 443
>gi|149914773|ref|ZP_01903303.1| N-acetyl-gamma-glutamyl-phosphate reductase [Roseobacter sp.
AzwK-3b]
gi|149811566|gb|EDM71401.1| N-acetyl-gamma-glutamyl-phosphate reductase [Roseobacter sp.
AzwK-3b]
Length = 680
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 58/387 (14%), Positives = 123/387 (31%), Gaps = 57/387 (14%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + I L P PG F +F++ ++ G+ + +
Sbjct: 336 DRRALSLRSVAVAAVIVLLLRPEALLGPG-FQMSFAATTALVAGYGW-------LKDHDV 387
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W + + + HF+ +GLIAN++++P++
Sbjct: 388 PLGPRWMR--------GAVSVLVSSFVAGIATAPIAAAHFNQFAHFGLIANLMSVPLMGV 439
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFVTI 183
+V+PA ++A LM L+ + VM GLD I+ +AH ++ P +
Sbjct: 440 MVMPAAVVAACLMPFGLEWLALWVMGLGLDWILWVAHWVAGWPGARGTVVSPGPLVLPLM 499
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
V L ++ + R G + ++ + + + P +LI++ G LV ++ +
Sbjct: 500 AVGVLFVMLWRGWGRLAGLAPVLVSGV---LWLGAERPQVLIADSGALVGVMTPEGRALS 556
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
FI W +A + V
Sbjct: 557 REKGAGFIAQNWLENDGDAADQAAAHARWSQ----------------------------V 588
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
++ +R C+ D L+ ++ C ++ P L++ G++ +
Sbjct: 589 MPGEIRLLAVHGRRAVDSLRDCEGHDWLVLSVEPDRALPC---QVVHPGTLRETGAMALR 645
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ I W
Sbjct: 646 TGRDGVRVVTAREIT------GARLWN 666
>gi|114705893|ref|ZP_01438796.1| ComEC/Rec2 family protein, putative [Fulvimarina pelagi HTCC2506]
gi|114538739|gb|EAU41860.1| ComEC/Rec2 family protein, putative [Fulvimarina pelagi HTCC2506]
Length = 801
Score = 190 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 73/378 (19%), Positives = 141/378 (37%), Gaps = 36/378 (9%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+I IA L+ F +F++ + G F S
Sbjct: 405 SIAAIAILALSPHAVMTASFQMSFAATIGLVGVYGAFSRYRGGRSRDISEGALRTVFFFL 464
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ A + + + I HF +GL+AN+L +P+ S +++P L+ ++
Sbjct: 465 VG-------TAATALIAGLATTPYSIFHFQRFAPFGLVANLLVMPLFSLLIMPMALLGVV 517
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
LM + LD IP + GLD +I IA ++ + G + ++ +T+ L+
Sbjct: 518 LMPVGLDAIPLTAVGMGLDALIAIAFDLASQLPDQSTGLVRPSALITLSAALLIFCIPVG 577
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+R + + +++ + +P+ LI E G AL++ T+ + P SF+ QW
Sbjct: 578 RLRWLAVPFLATGLVMAI--DRAATPEFLIFEDGKTFALIENGTIAYSKGRPNSFVSDQW 635
Query: 256 KSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
A E R + P C + C S + V
Sbjct: 636 DRAYRAEGTE---------------------RGLIPGLKDC-ESKICRFTTPSGITVAYT 673
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
++ +C ++I + + + L+T L++ GSL I P S + +
Sbjct: 674 TDYRLLGEACDSAEIAFVARAARTRRCRSGAHLVTLRTLRRSGSLAIARDPSSGEIVVSR 733
Query: 376 FIIKSAIENLHFPWTKHR 393
++ + + W +HR
Sbjct: 734 SVLAAPAD-----WNRHR 746
Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 16/163 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK---- 57
+ + ++D EG+ RL PP+GPAFPG +DF F Y++G+ A G+ IPK
Sbjct: 191 IVVAGEHDVMRPGDRFEGLVRLRPPAGPAFPGSYDFAFVPYFEGLGAYGFSLGIPKPRSE 250
Query: 58 --MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH-------CIP 108
+ + ++ ++ + IRA I A A+ + +
Sbjct: 251 LSTEGPPPTLSEQVAIAVADLRGMVTDRIRAIIPGQPGAVAAALVTGQRNGIDEETSEAL 310
Query: 109 VYGLIANILAIPILSFVVIPAGLIAIL---LMILSLDNIPFGV 148
+A+ILAI L ++ + + L+++ + + +
Sbjct: 311 RATGLAHILAISGLHVALVAGFAMVSIRRSLVLVGHLALVWPI 353
>gi|312115926|ref|YP_004013522.1| ComEC/Rec2-related protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221055|gb|ADP72423.1| ComEC/Rec2-related protein [Rhodomicrobium vannielii ATCC 17100]
Length = 729
Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats.
Identities = 66/381 (17%), Positives = 137/381 (35%), Gaps = 43/381 (11%)
Query: 16 TIEGIARLSPPSGPAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+ G+ L P L D +F + +A+ Y + + ++
Sbjct: 371 ALAGLVIL-----VVLPDSLIDISFQMSFAATAALIAGY---ERFGRYLHFEARSIRERL 422
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + +L + F HFH + Y + N++ P + F+ +PA ++A+
Sbjct: 423 AWQPVYLLGGVLVTTATAGLAVEPFSAYHFHTLTTYAALGNLVGGPPVDFIAMPAMIVAL 482
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFC 193
+ M L++ P VM G+D ++ +AH + + P + + IV L +V
Sbjct: 483 IAMPFGLEDAPLAVMGVGVDAMMAVAHWVGGLPGSTVPVAAFPFAALLLIVSGGLWLVIW 542
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI-SNYSNPPSFIF 252
+ + R +G +IG+ + + PD+L+ LVAL D+ + + + S+
Sbjct: 543 RRSWRVLGLGLIGVGVAMTSIHA---RPDILVDRDAKLVALRDREGRLQAPKTRRASYAL 599
Query: 253 SQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIV 312
QW A Q S + + +V
Sbjct: 600 QQWLRADGDTRKPKEAATGAGWQCDRTSCVSMVK----------------------GRLV 637
Query: 313 GVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDND 372
++ R D I C+ + IL+ + L++ L ++G+ I++ +
Sbjct: 638 SLIARPDAIEEDCRRAAILVMPMDLARPCPAPK-LVLDRGALWERGATAISLGDGALA-- 694
Query: 373 KVKFIIKSAIENLHFPWTKHR 393
+ ++ PW+ R
Sbjct: 695 ----VTTASEGRGDRPWSPTR 711
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/272 (12%), Positives = 87/272 (31%), Gaps = 13/272 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK-K 72
I A L PP P PG +DF +SYY+ + GY + P+ I +
Sbjct: 174 GEAIRFRAILGPPPEPVMPGGYDFARASYYQAVGGSGYSLTKPERIEGRALPWDMVPRTW 233
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCI-------PVYGLIANILAIPILSFV 125
++ ++ I+A + A+ + + +A+I++I +
Sbjct: 234 LADLRGRIGERIKAALPGQTGEIAAALTVGQTAGLDEKSMDDLRASGLAHIISISGMHMS 293
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH-RISVAHNEFCIGRIPETSFVTIV 184
++ G+ + +L+L P + + + +A + + + ++
Sbjct: 294 LVAGGMFWFVRWVLAL--FPSIALRYSTRGLAAMAALFVVTVYLALSGAAVGAVRAYLMI 351
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY--SFSPDLLISEKGNLVALVDKNTLIS 242
L + + ++ + +I++ S + + L+A ++
Sbjct: 352 AVVFLAILLNRPALSLRNVALAGLVILVVLPDSLIDISFQMSFAATAALIAGYERFGRYL 411
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
++ W+ +
Sbjct: 412 HFEARSIRERLAWQPVYLLGGVLVTTATAGLA 443
>gi|83592937|ref|YP_426689.1| ComEC/Rec2-like protein [Rhodospirillum rubrum ATCC 11170]
gi|83575851|gb|ABC22402.1| ComEC/Rec2-related protein [Rhodospirillum rubrum ATCC 11170]
Length = 739
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 62/395 (15%), Positives = 124/395 (31%), Gaps = 41/395 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + L P F +F++ I+ G +
Sbjct: 368 VDRTALSMRTLALAGVAVLLIAPESLMG-ASFQMSFAAVIALIATYGA-------LGPQA 419
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ A + + + HFH + +YG++AN++A+P+
Sbjct: 420 GRWRAGGGGGMGRAAALYLGGVALSTVVATVATLPYGAYHFHRVALYGVVANMIAVPLTG 479
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVT 182
F V+P L+ + LM L+ + + WGLD I+ +A + I P +
Sbjct: 480 FWVMPWCLVLLALMPFGLEGLAMAPLGWGLDGIVAVARWVGGWPGALLAIPDGPGWALGL 539
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + L + R G + I + + + + P PD+LI+++G L+A+ +
Sbjct: 540 VSLGGLWLCLWTRPWRLAGVVPILVGMTVPWLTP---PPDVLINDEGTLIAVRAAGGQLV 596
Query: 243 -NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
+ F W A + + + +C
Sbjct: 597 FSDFRKARFTREVWGEAFG---------------GAAGEGRFPVAGASADGRLVC-DGEG 640
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI------RDINTKLCNVSLLITPEILQ 355
C+ R +++ + + L+D++I +I L
Sbjct: 641 CLYR-RPGLVIALPRTLGAAFEDRALADLVIVPFARFASPPPPLAPGRGPGWIIDRGDLI 699
Query: 356 KQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
G+ + I + A E H PWT
Sbjct: 700 GGGAHALWIADDGQVTLR-----TVAGERGHRPWT 729
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 10/213 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK-MIYSSESHNTWTWKK 72
+ I + +L+PP P PG+FDF +++ I +G+ + +E
Sbjct: 182 GSRIAVLGQLAPPPTPVAPGVFDFARGLWFERIGGVGFALGPLRGRGSLAEGPVPRIRAA 241
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSFV 125
I +Q I A T + + I ++++LAI L+
Sbjct: 242 IQGWRQGVTARIIAAEPTLHGPLTAALITGEQRAIDPEIQEAMRASGLSHLLAISGLNMS 301
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ A + +L+ L P + W + + A A G I+
Sbjct: 302 L--AAGLMFVLVRGGLALWPRAALLWPIKKLAAAAALAGCAAYLVLSGAGVPAERAFIMT 359
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+L+ + + +L P S
Sbjct: 360 GLVLLAVLVDRTALSMRTLALAGVAVLLIAPES 392
>gi|259418796|ref|ZP_05742713.1| competence protein [Silicibacter sp. TrichCH4B]
gi|259345018|gb|EEW56872.1| competence protein [Silicibacter sp. TrichCH4B]
Length = 673
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 66/382 (17%), Positives = 137/382 (35%), Gaps = 37/382 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A + L P F +F++ + + + P
Sbjct: 328 VLMDRRAISVRAVAFAAVLVLLRRPESLLS-AGFQMSFAATLALV--VVFRAVQPMFRPG 384
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
H + I ++ + + F HF+ + YGLIAN+ A+P+
Sbjct: 385 RGGHLGGALRWIGALV---------VSSLVAGVATAPFGAAHFNMVSHYGLIANLAAVPV 435
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSF 180
+ VV+P ++AI L + F +M+ G+ I+ +A ++ P
Sbjct: 436 MGAVVVPGAVLAICLAPFGGSAVGFWIMSQGISWILTVADTVAGWPGARGQVVAPEPWML 495
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+V+ LL++ + +R +G IG+ LF +P S P++LIS G LV ++
Sbjct: 496 PVLVMGALLLLLWQGQLRWVGLAPIGVA---LFFWPSSPRPEVLISADGGLVGVMTSEGR 552
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ SF+ W + + + + F +++
Sbjct: 553 ALSRPRGKSFVAGIWLENDGDGADQVEA-----------FDRVPARQQGKVQTFQAVERH 601
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
F ++ + ++SC ++++ +I L +TP+ L+ GS+
Sbjct: 602 FVHVLGKTGL--------SEWQMSCAPHEVIVLSIEAEAP--DGECLWLTPKALRDTGSI 651
Query: 361 EITIIPPSNDNDKVKFIIKSAI 382
T + + SA
Sbjct: 652 AYTQRGEMITANAGARRLWSAR 673
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 76/231 (32%), Gaps = 8/231 (3%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI--PKMIYSSESHN 66
P + + A LSPP GPA PG FDF +++ G+ A+GY
Sbjct: 146 APPEPGSWVMTTAHLSPPQGPAEPGGFDFRRHAWFLGLGAVGYSRVPVLRSGPPEVLPVA 205
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
T + ++ S + T + +H +A++LAI L +
Sbjct: 206 TIRARFSDWVRASMPER-TGGVATALITGDRAHVPRHVTEDLRASNLAHLLAISGLHMGL 264
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSFVTIVV 185
+ A L +L P + W + I ++ G + +V
Sbjct: 265 FAGVIFASLRRGFAL--WPRIALRWPVKKISAAVALVASFGYLLLSGANVATERAFLMVA 322
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTF--PYSFSPDLLISEKGNLVAL 234
L+ V + ++ +++L S + + LV +
Sbjct: 323 VMLVAVLMDRRAISVRAVAFAAVLVLLRRPESLLSAGFQMSFAATLALVVV 373
>gi|85374134|ref|YP_458196.1| membrane metal-binding protein [Erythrobacter litoralis HTCC2594]
gi|84787217|gb|ABC63399.1| predicted membrane metal-binding protein [Erythrobacter litoralis
HTCC2594]
Length = 741
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 67/390 (17%), Positives = 127/390 (32%), Gaps = 37/390 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI-PKMIY 60
L++ ++ L P P +F + + AI ++ P +
Sbjct: 378 LALGREPLSLRMVAVAAVFVLLLWPESLVGP-----SFQMSFAAVIAIVALHNAEPVKRF 432
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ W + G + ++ HFH VYG +AN++AIP
Sbjct: 433 LAPREEGWFA------HVGRRALMLLVTGLVIEIALMPIVLFHFHRAGVYGALANVIAIP 486
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETS 179
+++F+ +P IA+ L + L + ++ LD+++ IAH S + ++ +
Sbjct: 487 LVTFISMPLIAIALALDAVGLGEPVWWLVGQSLDLLLGIAHFTSSQPGAVKLMPQMGLGT 546
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
V L + K R +G + ++L P PD+LIS G V + + N
Sbjct: 547 LSLFVAGGLWLALWKGRRRLLGFAPVAAGTLLLLLTP---VPDILISGDGRHVGIAEDNR 603
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
LI + + Q I R + L +
Sbjct: 604 LIMLRESRSDYARDNLMELAGMSGEPVTITDWPGAQCSRDFCTVTIQRGGRDWHVLMARS 663
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
V + + +C+ S I+I + L L + G
Sbjct: 664 RDRV-------------EERALAAACERSHIVIADRWLPRSC-RPQWLKADRRFLGQSGG 709
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
L + + ++ +F + E H W
Sbjct: 710 LALFL-------EEERFTSVAQGEGEHGWW 732
Score = 42.9 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 78/234 (33%), Gaps = 17/234 (7%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+ ARL PP+ P PG ++F +++ G +A G +++ ++
Sbjct: 201 AVVRFRARLMPPAPPMVPGAYNFARRAWFDGYAATGSVLGEIELVEPPPPPTG-----LA 255
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIPILSFVVI 127
++++ +R + A+ F I + ++L+I L I
Sbjct: 256 AVQRFLSGHVRDRVDGSAGTIAAAFASGDRGAITEADEEAMRDAGLTHLLSISGLHVSAI 315
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
A A +L + L P+ + L ++ ++ G T
Sbjct: 316 IAA--AYILSLKLLALWPWLALRVRLPLVAAGIGALAGIGYTLLTGAEVPTVRSCAAAVL 373
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPY---SFSPDLLISEKGNLVALVDKN 238
+L+ ++ + +L +P S + + +VAL +
Sbjct: 374 VLIALALGREPLSLRMVAVAAVFVLLLWPESLVGPSFQMSFAAVIAIVALHNAE 427
>gi|254462665|ref|ZP_05076081.1| competence protein [Rhodobacterales bacterium HTCC2083]
gi|206679254|gb|EDZ43741.1| competence protein [Rhodobacteraceae bacterium HTCC2083]
Length = 684
Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 67/390 (17%), Positives = 134/390 (34%), Gaps = 50/390 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A I + P PG F +F++ + + + +
Sbjct: 333 VMLERRAISLRAVALAAMIILIRRPDAITGPG-FQMSFAATTALVVVF----NTISRLNA 387
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ W+ I + HF+ I +GLIAN+ ++P+
Sbjct: 388 GKPPRHVIWRMIKG---------TVISSAVAGLATLPIAAAHFNNIAQFGLIANLASVPL 438
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+ +VIP ++A+ L+ + L+ +P VM WGLD I+ +A +S + P ++
Sbjct: 439 MGILVIPLAVVAVCLLPVHLEWLPLTVMGWGLDWILSVAREVSSWDGAIHKVPAPPSWAY 498
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+TI L + + R + I ++ +F + PD+LIS+ G LV ++
Sbjct: 499 LTICFGLLGLALMISKFRFVALAPI---VVGVFGWVTDQRPDILISDTGVLVGVLGAEGR 555
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ F+ W P + ++ D + ++ +
Sbjct: 556 ALSKEKGAGFVAGVWLENDGDPSFQRAAARRWDGPKGATRIGVHVIFA------------ 603
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
KR C+ SDI + + C + + L + GS+
Sbjct: 604 ------------AAGKRGLDAFDGCKASDIAVFSEMFERDVPCR---VFDQKSLGRSGSI 648
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
I+I N + + W
Sbjct: 649 AISIKENGALN-----VTTARGVAGRRYWN 673
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/239 (17%), Positives = 84/239 (35%), Gaps = 17/239 (7%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A + A LSPP+GPA P FDF +++ I +GY ++ ++
Sbjct: 154 AGARVMTTAHLSPPAGPAEPHGFDFQRHAWFTQIGGVGYARVPLLLVAYPAEGLSFF--- 210
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSFV 125
++ + N I ++ A A+ + + + + +A++LAI L
Sbjct: 211 --KLRIALSNRINLHLDGQTGAFAAAVMTGDRSGLSMETLKNLRHSNLAHLLAISGLHMG 268
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS-FVTIV 184
++ A + A L L IP + I + I+ G T +
Sbjct: 269 LLVAFVFAALR--FGLSLIPSLASGSAVKKIAALGGLIAAGGYLGLSGGSVATERAFIMA 326
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY--SFSPDLLISEKGNLVALVDKNTLI 241
L V + + ++ + II++ + + LV + + + +
Sbjct: 327 AVALGAVMLERRAISLRAVALAAMIILIRRPDAITGPGFQMSFAATTALVVVFNTISRL 385
>gi|56552861|ref|YP_163700.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|56544435|gb|AAV90589.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 853
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 73/393 (18%), Positives = 137/393 (34%), Gaps = 38/393 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I ++ + L P P +F + + + P M
Sbjct: 481 MMIGRRAVSLRLVAAAAMLILLIQPENILSP-----SFQLSFAAVGTVIALAEAPIMSIF 535
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ KK + I + G A S + HFH YG +ANILAIP+
Sbjct: 536 GDRREAGWLKKTALIIAEIIIG-----GVMVEAVVSPVTLYHFHQSGFYGALANILAIPL 590
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSF 180
+FV IPA +A+L ++ + V + +++ IAH ++ F + I
Sbjct: 591 TTFVTIPAEGLALLTDLIGCSAPFWWVTDQSIRLLLAIAHYVASLPMAGFMLPLIGAWLC 650
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ ++ +L + KT+ R G + + + ++++ P PD +IS G +A N
Sbjct: 651 LFMMAGWLWLGLWKTSWRLWGVVPLVLGVLMIILNP---RPDWVISRDGKTIAFKTDN-- 705
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
P F++ Q N + LC K
Sbjct: 706 ---PKQPYQFVW-------------PEKDSYSQDQIANLIGFDQEEEKQLFGTNLCQKGF 749
Query: 301 FCVGCHRS-DVIVGVLKRKDMI-RLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQG 358
+ + ++ + + + C +D ++++ R + L I +L+K+G
Sbjct: 750 CEIALAQQHYNLLAIKGKAAGLSPEECSQNDWVVSSARLPVSC-HPKRLKIDRCLLEKRG 808
Query: 359 SLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
L P + +I S N PW +
Sbjct: 809 GLVFYRKSPFL---RRPVMIASYSANDQHPWIR 838
Score = 52.9 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 90/250 (36%), Gaps = 14/250 (5%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ A I +L+ P P +D+ ++++ ISA G+ P ++ +
Sbjct: 294 FSGLEAGAKIAVRVKLTAPMPAQIPAGYDYAEIAWFQRISATGHALDQPVILEKP--VLS 351
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA-------NILAIP 120
++SI Q I +G A+ F+ I +A ++L++
Sbjct: 352 GFSLIMASIHQRLTRHIIEKLGARSGGVAAAFVTNDIGSISESDTVAMRKAGLTHLLSVG 411
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ V+ A ++ I + +L+L P+ V+ + L +I + F G T
Sbjct: 412 GMHIGVVIAAVMFITIRLLALS--PYLVLHFPLRMIAACNAALIGMLYTFVAGCEIPTVR 469
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP---YSFSPDLLISEKGNLVALVDK 237
+ F+L ++ ++IL P S S L + G ++AL +
Sbjct: 470 SMLTAFFILFGMMIGRRAVSLRLVAAAAMLILLIQPENILSPSFQLSFAAVGTVIALAEA 529
Query: 238 NTLISNYSNP 247
+
Sbjct: 530 PIMSIFGDRR 539
>gi|146279123|ref|YP_001169282.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17025]
gi|145557364|gb|ABP71977.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17025]
Length = 671
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 53/373 (14%), Positives = 105/373 (28%), Gaps = 39/373 (10%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + + L P F +F++ I
Sbjct: 328 DRRALSMRSFALAASVILLWQPEALLE-AGFQMSFAATAGLIWGFNALRER--------- 377
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + G + + HF+ I YGL+ N++A+P++
Sbjct: 378 -----VHPRTMSRFVAPVFLLFVSSVIGGVTTGPYAAAHFNRIATYGLMGNLIAVPMMEL 432
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVTI 183
+V+PA +A LL M G I+ +AH ++ P +
Sbjct: 433 LVMPAAGVAALLAPFGASFPALWAMELGARWILWVAHWVAALPGSVGAVASPGPWVLPIL 492
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ L ++ + RH G + + + + + P LL+S G LV L+ +
Sbjct: 493 TLGGLWLMLWRGRARHAGLVGMAGAFL---LWAQADRPPLLVSSDGALVGLLGPEGRALS 549
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ F W + + +
Sbjct: 550 SARGGGFAARSWLENDGDLADQPAAAARPGFDGPRGARRFS------------------- 590
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
V + D I +C + ++I R LI +L + G+L I
Sbjct: 591 MAGIEGVALKGKGAADRIPEACATAQLVILAARHEGPVP-PGCQLIDQSVLARTGALAIW 649
Query: 364 IIPPSNDNDKVKF 376
+
Sbjct: 650 PGAEGLRMVPARA 662
Score = 37.1 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 86/252 (34%), Gaps = 14/252 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ L P PA PG FDF +++ + A+GY + M+ + S ++ +
Sbjct: 146 GMVVMMTGHLDAPLPPAEPGGFDFRRMAFFDRLGAVGYTRTPVVMLEPAASGDSLVNRLR 205
Query: 74 SSIKQSFLNEIRANIGTYGSASA----SIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ + G + +A + + + GL A+ILAI L+ ++
Sbjct: 206 VAVRIGVQDRFPGEAGAFSAAVLTGDYAGISAATMEDLRLSGL-AHILAISGLNMSLLAG 264
Query: 130 GLIAIL-----LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ ++ L+ +P +A + + A + + + + + ++
Sbjct: 265 FVFGLVRHGLALVPPLALRLPTKKIAACVAFL---ATGFYLLMSGGNVPTLRAFVMIAVM 321
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+ +L ++R I ++ + + L+ + +
Sbjct: 322 LAAILADRRALSMRSFALAASVI-LLWQPEALLEAGFQMSFAATAGLIWGFNALRERVHP 380
Query: 245 SNPPSFIFSQWK 256
F+ +
Sbjct: 381 RTMSRFVAPVFL 392
>gi|110633996|ref|YP_674204.1| ComEC/Rec2-related protein [Mesorhizobium sp. BNC1]
gi|110284980|gb|ABG63039.1| ComEC/Rec2-related protein [Chelativorans sp. BNC1]
Length = 788
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 80/371 (21%), Positives = 135/371 (36%), Gaps = 26/371 (7%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P P F +F++ ++ + + + + + I F +
Sbjct: 419 SPHEVVGPS-FQMSFAATAALVAGYAVWSEWRRHRRTGHKGDYPLAYRAGRIAIGFTIGM 477
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
A ++++F + HF + L AN+ A P +S + +PA ++AIL M LD I
Sbjct: 478 AAT-SLIAGTASALFGVWHFQRVTPLALPANLAAAPFVSIIAMPAAVVAILAMPFGLDGI 536
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
F M + +I IA S +G IP ++F + +++V T +R I +
Sbjct: 537 FFKAMGEAITAVIVIAKWFSDRSPVDAVGMIPLSAFFALTAALVILVVSTTRLRLIAVPL 596
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPF 263
+ +L T PD+LISE LV + ++ L N P +F W AL T
Sbjct: 597 CVLGFALLVT---RQLPDVLISEDARLVGVRGEHGILAVNRPRPNAFTTDDWMRALDTGT 653
Query: 264 HEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
P + + F C C+ H S +V + +
Sbjct: 654 TLKPVSAADWVSGLA---------------FSCADGL-CMARHVSGALVAHAETESAAET 697
Query: 324 SCQLSD-ILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAI 382
C + I+I N + ++++T L + GS I I AI
Sbjct: 698 VCLSASLIVIDDAAAQNPCGPSEAVVLTKRDLARSGSASIHFDREGMALRPE---ITFAI 754
Query: 383 ENLHFPWTKHR 393
PW HR
Sbjct: 755 GEPWRPWHAHR 765
Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 2 LSITKKYDPFPA--ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+ +T + P +EG+ARL PPSGP PG +DF+F SY+ G A+G+F + P+ I
Sbjct: 197 VRLTAREAPPELQPGDIVEGLARLMPPSGPVRPGSYDFSFVSYFTGTGALGFFMTGPERI 256
Query: 60 YSSE--SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH-------FHCIPVY 110
+ S I ++ + IR ++G + + +
Sbjct: 257 EADRQVSTLAKIAHSIEGVRLALAERIRTHVGGAEGEVIVALITGYRPGIPEEVNEWLRR 316
Query: 111 GLIANILAIPILSFVVIPAGLIAIL 135
+A+IL+I L ++ A ++ IL
Sbjct: 317 SGLAHILSISGLHMALVAATVMFIL 341
>gi|73667202|ref|YP_303218.1| ComEC/Rec2-related protein [Ehrlichia canis str. Jake]
gi|72394343|gb|AAZ68620.1| ComEC/Rec2-related protein [Ehrlichia canis str. Jake]
Length = 672
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 68/389 (17%), Positives = 145/389 (37%), Gaps = 55/389 (14%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I + ++ F + I L P P F +F++ I++ F+
Sbjct: 336 IDRSHNSFCSIAIASFIILLFTPESLLSPS-FQMSFAAVLALIASRNIFFK--------- 385
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
I++I Q FL+ I +++ + +++ HF+ + G+ AN+LAIPI +
Sbjct: 386 ------LVVINNILQYFLSIIVSSL--IAGLATLPYVVYHFNYFSIAGVFANLLAIPITT 437
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVT 182
F+++P GL I+L +++L+ ++ + ++I++ IS + TS +
Sbjct: 438 FLIMPLGLFYIILGVVNLEYYVSWMIESAVGLLIYVVQYISGMNKLVLLFHAFSSTSILI 497
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
I FL + N+R G I++ F +PD++I++ +V +D
Sbjct: 498 ITFGFLFLCLWNGNLRFCGLILVA---CGFFVGVNYVTPDIMINQHNVVVKELDNKLYAI 554
Query: 243 N-YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
N ++ SFI W ++ C K
Sbjct: 555 NQKAHLTSFINLTWAKQNGQREMLKHPLRNNQC-------------------LSCKKGEG 595
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
C+ + V + + + +C D++I + + C V+ I ++ S
Sbjct: 596 CIY-SKFGKKVLIAYNANYVLRNCINVDLVIQGKKFVYPHEC-VTQHIAYNDKRR--SYF 651
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ + +++ + + W
Sbjct: 652 VWVTKNHIKVNEI---------SGNRIWH 671
Score = 40.6 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 9/133 (6%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
I+ A + PPS +DF+F SY+K ISA+G+ S + S
Sbjct: 148 SNITIGDKIKFSAVVYPPSMSVSQFSYDFSFVSYFKNISAVGFAVSDVYLFEKKNSRR-- 205
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPI 121
+ I ++ + ++ + S LI I IA++ AI
Sbjct: 206 ITEYIEFVRFNIYKIFLRSLTEDSANILSALLIGKKEGISNDIMEAIRNTGIAHLFAISG 265
Query: 122 LSFVVIPAGLIAI 134
L + +
Sbjct: 266 LHLSFVAGLFFVL 278
>gi|126731369|ref|ZP_01747176.1| competence protein [Sagittula stellata E-37]
gi|126708280|gb|EBA07339.1| competence protein [Sagittula stellata E-37]
Length = 686
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 68/386 (17%), Positives = 133/386 (34%), Gaps = 48/386 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + + + P PG F +F++ ++ +
Sbjct: 329 DRRALSLRSVAIAALVVLILQPEALLGPG-FQMSFAATTALVAVF----ERLSAARAGRK 383
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W +S A+ + + HF+ VYGL+AN++++P++
Sbjct: 384 WPGWLGPVLSVFVS----------SAVAGAATAPVGMAHFNQASVYGLLANLVSVPVMGV 433
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTI 183
VV+P G++A LLM L LD I VMA GLD I+ +A +S + P TI
Sbjct: 434 VVVPLGVVAGLLMPLGLDWIALHVMALGLDWILWVARAVSDWPGSVRPVVAPPPVVLPTI 493
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
L++ + R G I + + + + + PD+LI++ G+LV ++ +
Sbjct: 494 AAGGLVLCLWRGRARLAGLIPVAVAV---ALWSQTQRPDVLIADNGSLVGIMTPQGRGLS 550
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
FI W + ++ +N+ + +
Sbjct: 551 RDQGAGFIADNWLENDGRGGTQDDAARRWPGTHRNRFAQADSTVGQ-------------- 596
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
VI KR + C I++ ++ + + P L GS+ +
Sbjct: 597 ------VIHVQGKRAARLLTRCVSDQIVVASVDI---AIDGTCRVFDPVTLGATGSVALW 647
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPW 389
P + ++ + W
Sbjct: 648 STPGGLRVE------TASERSGRRLW 667
Score = 39.4 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 8/129 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
T+ L PP G PG FDF ++++ I A+GY + M+ +
Sbjct: 144 GMTVILTGHLGPPGGAVEPGGFDFRRHAWFQQIGAVGYTRTPVLMLEPPPRGFASGLT-V 202
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVV 126
+ + + +++ + A A+ + + L +A++LAI L +
Sbjct: 203 TRARMALSAHVQSVLEGETGAFAAAIMTGDRAGMGADTLQDLRDTNLAHLLAISGLHMGL 262
Query: 127 IPAGLIAIL 135
+ + L
Sbjct: 263 LAGFVFGTL 271
>gi|58697018|ref|ZP_00372488.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
simulans]
gi|58536723|gb|EAL59993.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
simulans]
Length = 724
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 69/391 (17%), Positives = 134/391 (34%), Gaps = 55/391 (14%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +KY A + + P PG F +FS+ +++
Sbjct: 385 IMIERKYRGLIAIAFAAAVILIIEPEAILKPG-FQMSFSAVLALVASYQI---------- 433
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
K+ IK S + + I +F+ + G+I N++AIPI
Sbjct: 434 -------NANKLFKIKIMKYFVSIMISSVIASLATVPYTIYNFNYFSISGIITNLVAIPI 486
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSF 180
++ ++IP G+I +LL+ L ++ I + ++ I++I + I+ R P +S
Sbjct: 487 VTLIIIPLGIIYVLLIPLGIEWIIAPFIERPINSILYITNAIASLQYLVIPIRTFPASSI 546
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I L + + N R +G I + I + +PD+LI+ N+ A N L
Sbjct: 547 IIITFGLLWLCLWERNWRFLGFFFIVLGICFSAAY---KTPDILINAD-NVAAKESDNLL 602
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
S +F+ W + K
Sbjct: 603 YSLTRKSRNFVIKTWAKQNGQNQILNHTKYSNPDKRL---------------------KY 641
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
C+ ++ V + +K+ I +C D+ I + +I L+ G+
Sbjct: 642 GCIYNKGNNKSVLLAYKKEDISENCDKVDLTIQLSEFDYSACNTK--IIKHADLETYGTH 699
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ + + V+ + PW
Sbjct: 700 SVWLTNRYVKINTVRS---------NRPWHM 721
>gi|260753438|ref|YP_003226331.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552801|gb|ACV75747.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 853
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 74/393 (18%), Positives = 137/393 (34%), Gaps = 38/393 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I ++ + L P P +F + + + P M
Sbjct: 481 MMIGRRAVSLRLVAAAAMLILLIQPENILSP-----SFQLSFAAVGTVIALAEAPIMSIF 535
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ KK + I + G A S + HFH YG +ANILAIP+
Sbjct: 536 GDRREAGWLKKTALIIAEIIIG-----GVMVEAVVSPITLYHFHQSGFYGALANILAIPL 590
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSF 180
+FV IPA +A+L ++ + V + +++ IAH ++ F + I
Sbjct: 591 TTFVTIPAEGLALLTDLIGCSAPFWWVTDQSIRLLLAIAHYVASLPMAGFMLPMIGAWLC 650
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ ++ +L + KT+ R G + + + ++++ P PD +IS G +A N
Sbjct: 651 LFMMAGWLWLGLWKTSWRLWGVVPLVLGVLMIILNP---RPDWVISRDGKTIAFKTDN-- 705
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
P FI+ Q N + LC K
Sbjct: 706 ---PKQPYQFIW-------------PEKDSYSQDQIANLIGFDQEEEKRLFGTNLCQKGF 749
Query: 301 FCVGCHRS-DVIVGVLKRKDMI-RLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQG 358
+ + ++ + + + C +D ++++ R + L I +L+K+G
Sbjct: 750 CEIALAQQHYNLLAIKGKAAGLSPEECSQNDWVVSSARLPVSC-HPKRLKIDRCLLEKRG 808
Query: 359 SLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
L P + +I S N PW +
Sbjct: 809 GLVFYRKSPFL---RRPVMIASYSANDQHPWIR 838
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/250 (17%), Positives = 89/250 (35%), Gaps = 14/250 (5%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ A I +L+ P P +D+ ++++ ISA G+ P ++ +
Sbjct: 294 FSGLEAGAKIAVRVKLTAPMPAQIPAGYDYAEIAWFQRISATGHALDQPVILEKP--VLS 351
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIP 120
++SI Q I +G A+ F+ I + ++L++
Sbjct: 352 GFSLIMASIHQRLTRHIIEKLGARSGGVAAAFVTNDIGSISESDKVAMRKAGLTHLLSVG 411
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ V+ A ++ I + +L+L P+ V+ + L +I + F G T
Sbjct: 412 GMHIGVVIAAVMFITIRLLALS--PYLVLHFPLRMIAACNAALVGMLYTFVAGCEIPTVR 469
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP---YSFSPDLLISEKGNLVALVDK 237
+ F+L ++ ++IL P S S L + G ++AL +
Sbjct: 470 SMLTAFFILFGMMIGRRAVSLRLVAAAAMLILLIQPENILSPSFQLSFAAVGTVIALAEA 529
Query: 238 NTLISNYSNP 247
+
Sbjct: 530 PIMSIFGDRR 539
>gi|225630830|ref|YP_002727621.1| ComEC/Rec2 family protein [Wolbachia sp. wRi]
gi|225592811|gb|ACN95830.1| ComEC/Rec2 family protein [Wolbachia sp. wRi]
Length = 717
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 69/391 (17%), Positives = 134/391 (34%), Gaps = 55/391 (14%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +KY A + + P PG F +FS+ +++
Sbjct: 378 IMIERKYRGLIAIAFAAAVILIIEPEAILKPG-FQMSFSAVLALVASYQI---------- 426
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
K+ IK S + + I +F+ + G+I N++AIPI
Sbjct: 427 -------NANKLFKIKIMKYFVSIMISSVIASLATVPYTIYNFNYFSISGIITNLVAIPI 479
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSF 180
++ ++IP G+I +LL+ L ++ I + ++ I++I + I+ R P +S
Sbjct: 480 VTLIIIPLGIIYVLLIPLGIEWIIAPFIERPINSILYITNAIASLQYLVIPIRTFPASSI 539
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I L + + N R +G I + I + +PD+LI+ N+ A N L
Sbjct: 540 IIITFGLLWLCLWERNWRFLGFFFIVLGICFSAAY---KTPDILINAD-NVAAKESDNLL 595
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
S +F+ W + K
Sbjct: 596 YSLTRKSRNFVIKTWAKQNGQNQILNHTKYSNPDKRL---------------------KY 634
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
C+ ++ V + +K+ I +C D+ I + +I L+ G+
Sbjct: 635 GCIYNKGNNKSVLLAYKKEDISENCDKVDLTIQLSEFDYSACNTK--IIKHADLETYGTH 692
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ + + V+ + PW
Sbjct: 693 SVWLTNRYVKINTVRS---------NRPWHM 714
>gi|85703339|ref|ZP_01034443.1| competence protein [Roseovarius sp. 217]
gi|85672267|gb|EAQ27124.1| competence protein [Roseovarius sp. 217]
Length = 680
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 61/393 (15%), Positives = 126/393 (32%), Gaps = 55/393 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A I P PG F +F++ ++ G+
Sbjct: 341 VMLERRAFSLRAVAVAAMIVLTLHPEALLGPG-FQMSFAATVALVAVFGWLRD------- 392
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ ++ I A+ + HF+ +GL+AN++++P+
Sbjct: 393 -----AGLARGPRWLRPVLAVVIS---SAVAGAATAPVAAAHFNQYAQFGLLANLVSVPL 444
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SF 180
+ +V+PA +IA LL+ L +D I VM GL I+ +A ++ P
Sbjct: 445 MGALVMPAAVIATLLVPLGMDWIALRVMELGLRWILGVAEWVTALDGARVPVVAPGPYVL 504
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ L +V + R +G + I + + + ++ P +++S+ G L+ ++ +
Sbjct: 505 PLLAFGALFIVLWQGRTRFLGVLPIILGTLF---WSFTERPVMVVSDTGTLIGIMTEAGR 561
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
N F+ W +
Sbjct: 562 ALNKPTGGGFVADNWLENDGDDASRDAAFARWSEG------------------------- 596
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI-RDINTKLCNVSLLITPEILQKQGS 359
V V K LSC + +++ ++ D ++TP+ L+ GS
Sbjct: 597 ---LAQSRGVRVVAGKAAAAKPLSCDGAKLVVLSVTPDTAPAETLDCQIVTPDTLRATGS 653
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
L + +I W
Sbjct: 654 LAYYATANGLRLVTARDLI------GQRLWNSQ 680
Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 52/127 (40%), Gaps = 12/127 (9%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ A L P GP PG FDF +++ GI A+GY + + + + + +
Sbjct: 165 RVIMTAHLGPTGGPVEPGGFDFQRHAWFLGIGAVGYTRTPVLRLEAGQGG-----QALFR 219
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVVIP 128
+ + +++ + A A+ + + + L +A++LAI L ++
Sbjct: 220 ARMALSQHVQSRLPGQTGAFAAAIMTGDRAGLSLATLDVMRISNLAHLLAISGLHMGLLA 279
Query: 129 AGLIAIL 135
+ A +
Sbjct: 280 GFVFAAV 286
>gi|83951833|ref|ZP_00960565.1| competence protein [Roseovarius nubinhibens ISM]
gi|83836839|gb|EAP76136.1| competence protein [Roseovarius nubinhibens ISM]
Length = 685
Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats.
Identities = 57/389 (14%), Positives = 127/389 (32%), Gaps = 54/389 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ A I P PG F +F++ ++ G S
Sbjct: 345 DRRAISLRAVALAAIIVLALRPEAMLGPG-FQMSFAATTALVAVFG---------RVSSY 394
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W + + ++ + + + F HF+ I YGL+AN++++P++
Sbjct: 395 ERGWVPGWLRPVTTVVISSL------VAGLATAPFAAAHFNQIAHYGLLANLVSVPLMGV 448
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVTI 183
V+PA ++++ LM L + + +M GL I+ +AH ++ + P +
Sbjct: 449 WVMPAAVLSVSLMPLGGEALGLWIMGLGLRWILGVAHWVAELDGARGVVTAPGPWVIPCL 508
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
L ++ + +R G + + + + + P +LISE G LV ++ + +
Sbjct: 509 AWGALFVILWQGKLRFFGLLPVVAGF---WIWSGAERPKVLISEDGRLVGVMTEAGRALS 565
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
F+ W +A + + +
Sbjct: 566 RERGAGFVAMNWLENDGDAGDQAAAAARWEAGAAEIARWD-------------------- 605
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
+ V ++ C S L+T + + +P L++ G++ +
Sbjct: 606 ------LKVLRGAQEVRGFDGCTASQRLVT--PKDPDQNALPCQVFSPRSLRQSGAVALY 657
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ I + + W
Sbjct: 658 LRKG------EVITITARQISGTRLWNSR 680
>gi|241762544|ref|ZP_04760619.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241372872|gb|EER62559.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 859
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 73/393 (18%), Positives = 136/393 (34%), Gaps = 38/393 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I ++ + L P P +F + + + P +
Sbjct: 481 MMIGRRAVSLRLVAAAAMLILLIQPENILSP-----SFQLSFAAVGTVIALAEAPIISIF 535
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ KK + I + G A S + HFH YG +ANILAIP+
Sbjct: 536 GDRREAGWLKKTALIIAEIIIG-----GVMVEAVVSPITLYHFHQSGFYGALANILAIPL 590
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSF 180
+FV IPA +A+L ++ + V + +++ IAH ++ F + I
Sbjct: 591 TTFVTIPAEGLALLTDLIGCSAPFWWVTDQSIRLLLAIAHYVASLPMAGFMLPMIGAWLC 650
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ ++ +L + KT+ R G + + + ++++ P PD +IS G +A N
Sbjct: 651 LFMMASWLWLGLWKTSWRLWGVVPLVLGVLMIILNP---RPDWVISRDGKTIAFKTDN-- 705
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
P FI+ Q N + LC K
Sbjct: 706 ---PKQPYQFIW-------------PEKDSYSQDQIANLIGFDQEEEKRLFGTNLCQKGF 749
Query: 301 FCVGCHRS-DVIVGVLKRKDMI-RLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQG 358
+ + ++ + + + C +D +I++ + L I +L+K+G
Sbjct: 750 CEIALAQQHYNLLAIKGKAAGLSPEECSQNDWVISSGYLPASC-RPKRLKIDRCLLEKRG 808
Query: 359 SLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
L P + +I S N PW +
Sbjct: 809 GLVFYGKSPFL---RRPVMIASYSANDQHPWMR 838
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/250 (17%), Positives = 90/250 (36%), Gaps = 14/250 (5%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ A I +L+ P P +D+ ++++ ISA G+ P ++ +
Sbjct: 294 FSGLEAGAKIAVRVKLTAPMPAQIPAGYDYAEIAWFQRISATGHVLDQPVILEKP--VLS 351
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA-------NILAIP 120
++SI Q I +G A+ F+ I +A ++L++
Sbjct: 352 GFSLIVASIHQRLTRHIIEKLGARSGGVAAAFVTNDIGSISESDTVAMRKAGLTHLLSVG 411
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ V+ A ++ I + +L+L P+ V+ + L +I + F G T
Sbjct: 412 GMHIGVVIAAVMFITIRLLALS--PYLVLHFPLRMIAACNAALIGMLYTFVAGCEIPTVR 469
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP---YSFSPDLLISEKGNLVALVDK 237
+ F+L ++ ++IL P S S L + G ++AL +
Sbjct: 470 SMLTAFFILFGMMIGRRAVSLRLVAAAAMLILLIQPENILSPSFQLSFAAVGTVIALAEA 529
Query: 238 NTLISNYSNP 247
+
Sbjct: 530 PIISIFGDRR 539
>gi|68171732|ref|ZP_00545084.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Sapulpa]
gi|88657575|ref|YP_507253.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Arkansas]
gi|67998843|gb|EAM85543.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Sapulpa]
gi|88599032|gb|ABD44501.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Arkansas]
Length = 674
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 61/344 (17%), Positives = 135/344 (39%), Gaps = 44/344 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I + ++ F + I L P P F +F++ +++ F
Sbjct: 337 ILIDRNHNNFCSIAVASFIILLFNPESLLSPS-FQMSFAAVLALVASHNIFL-------- 387
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+++I Q F + + +++ S + +++ HF+ + G+ AN+LAIPI
Sbjct: 388 -------RLVVMNNIVQYFSSIVLSSL--IASLATLPYVVYHFNYFSIAGVFANLLAIPI 438
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+F ++P GL+ I+L I++L+ ++ ++++I+I I+ S
Sbjct: 439 TTFFIMPLGLLYIVLGIVNLEFCVSWMLESTVNLLIYIVKYIAKIDGLVVLFHAFSSVSI 498
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I + FL + K N+R G I++ + F +PD++ ++ +V ++
Sbjct: 499 LIITLGFLFLCLWKGNMRFCGLILVILGF---FVGISYVTPDIMFNQHNIVVKELNGKLY 555
Query: 241 ISN-YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
N ++ SFI W + +L ++
Sbjct: 556 AINQKAHLTSFINLTWARQNGQKKMLKHYSGNNQ--------------------YLSCER 595
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLC 343
+ C+ + V + D + +CQ D++I + + C
Sbjct: 596 AGCIYN-KLGRNVLIAYNADYVMQNCQDVDLIIQAKKFMYPSEC 638
Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
D ++ A + PPS P +DF+ +Y+K ISA+G+ S + S S
Sbjct: 151 DNITIGDMVQFSAIIYPPSVAVSPFSYDFSRIAYFKNISAVGFAVSNICLFKKSRSRR-- 208
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ I I+ + + ++ + S LI
Sbjct: 209 VTEYIELIRLNIYKVLLRSLTEDSANILSALLI 241
>gi|90419607|ref|ZP_01227517.1| putative ComEC/Rec2-related protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336544|gb|EAS50285.1| putative ComEC/Rec2-related protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 791
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 70/392 (17%), Positives = 135/392 (34%), Gaps = 31/392 (7%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I + + L P F +F++ I
Sbjct: 387 IDRPALTLRNVAIAAIVVILVAPHA-VMTASFQMSFAATVALIGGYAVLSQWRARRKRGR 445
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ KI ++ + + HFH + +G +AN+L +P+ +
Sbjct: 446 ETDRGVAGKII-----VALSAIMVTSILAGSATAPYAAYHFHRLATFGFVANLLTMPLFT 500
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++P L+ LL+ LD P+ M GL +++ IA + + IGR+ + + +
Sbjct: 501 LWIMPLALVGTLLIPFGLDAWPYQAMGAGLWLVLEIARNVYAWLPDQAIGRMTASGLLLL 560
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LIS 242
L + +R + ++ + P+LL+ E G VA + + L
Sbjct: 561 TAAILTASCLASRLRW--LGLPLALAGLVAAPDRTAPPELLVFEDGKEVATLAADGQLAF 618
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
P SFI QW+ A EA + D + + E +C
Sbjct: 619 LRPRPSSFIAEQWERAF-----EARAPRGADTERIRATISAECAA------------KYC 661
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
R + V + +C +D+ I + + + ++L+T L++ GSL I
Sbjct: 662 RFTTRGGLRVIWTEDYARTGDACDEADVAIVSRAIRLAECRSGAVLVTLRTLRRTGSLAI 721
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
+ + + I A+ + W HR+
Sbjct: 722 SR-----EAATGRPRIVKAVRDPPERWNVHRL 748
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + +++P G+ RL PPSGPAFPG +DF + ++ GI A GY P+
Sbjct: 183 IVVGSRHEPIAPGGLYRGLVRLGPPSGPAFPGSYDFAMAPFFAGIGAYGYSLGAPEAEPM 242
Query: 62 SESHNTWTWKKISSIKQ-------SFLNEIRANIGTYGSASASIFLI 101
++ ++ I IG A A+ +
Sbjct: 243 PAPTTGEGGGLLADLRHVQTETRLVLTERISTVIGGREGAIAAALIT 289
>gi|182678394|ref|YP_001832540.1| ComEC/Rec2-related protein [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634277|gb|ACB95051.1| ComEC/Rec2-related protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 792
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 63/410 (15%), Positives = 125/410 (30%), Gaps = 53/410 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--- 58
+ + ++ ++ P F +F++ +S +
Sbjct: 362 VLLDRQALTMRNLAFAALFVLVTEPEAILG-ASFQLSFAAVAALVSVYETRMAARAREQE 420
Query: 59 --------IYSSESHNTWTWKKISSIKQSFLNEIRANIGTY------GSASASIFLIKHF 104
S S + + +S +R G + + + F+ +F
Sbjct: 421 DLTRQIVQPLPSPSQGVFRGLALWRRWESIAPLLRQGPGGLLFATFCATMATASFMAYNF 480
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
H + Y LI N L + I+ +P L+ LL LD + + G+ I+ +A I
Sbjct: 481 HELSPYVLIGNPLTLSIIEIFAVPGALLGTLLYPFGLDAWVWHYIGAGITFIMWLARIIG 540
Query: 165 VAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
+ S V + + L V ++ + +I +I L D+
Sbjct: 541 GWPGATIHLPAFAPWSLVFLSLGVLSAVLWRSALLRASAIPF--MLIGLCGAFSGPVFDI 598
Query: 224 LISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSL 282
+ G+ +AL ++ P F QW A +
Sbjct: 599 AVPPSGDSLALRGRDGRLAVLGPRPSLFGAEQWLRADADGRDARAARKGN---------- 648
Query: 283 KEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL 342
K CVG V ++ ++ C+ + IL+T I
Sbjct: 649 -------------VCDKLGCVGHLADGRAVALVLDREAFIEDCRRAAILVT--PLIAPSG 693
Query: 343 CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
C S+LI +L+ G+L + + + + + PW+
Sbjct: 694 CAASILIDRSVLRDTGALTLRLGTGEPTLRRAR------APDEDRPWSPR 737
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
T++ PF A T + ARL PP+ + PG +DF +++ I A+G + + + +
Sbjct: 168 TRRAPPFGAGTYVSLKARLLPPARASLPGGYDFARDAWFARIGAVGTALGRIETVSAPDP 227
Query: 65 HNTWTWKKISSIKQSFLNEIR 85
+ + +R
Sbjct: 228 PGFGLAVMTALDRGRNALALR 248
>gi|304391661|ref|ZP_07373603.1| DNA uptake protein [Ahrensia sp. R2A130]
gi|303295890|gb|EFL90248.1| DNA uptake protein [Ahrensia sp. R2A130]
Length = 761
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 70/397 (17%), Positives = 142/397 (35%), Gaps = 36/397 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + +K + L PS F +F++ ++
Sbjct: 391 IMLDRKALTMRNVALAALVVMLVSPSA-ILSAGFQMSFAAVAALVAVYEGLNRRNAARPK 449
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ +++ ++ + IF HF + GL+AN+ A+P+
Sbjct: 450 TFRKGGLIAGTGRVLRRDVGGLALTSL--VAGLATGIFAAYHFQRVAPLGLLANLAAMPV 507
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+SF V+P L+++L + L + P MAW + ++ +A+ +S + GRIP +SF+
Sbjct: 508 VSFAVMPLALLSMLALPFGLQDWPLAAMAWSTEWVVAVANSVSDMGPQGITGRIPVSSFI 567
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL- 240
L+M ++ ++ G + + + P +LISE G +A++ ++T
Sbjct: 568 CATAGLLIMTLARSKLKLFGL---AFLLPAVLLAQTTKMPAILISEDGRQIAILSESTEP 624
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
FI W++A + Q + +
Sbjct: 625 SLLRERGSRFITEIWQTAYPPNQADGTPHSSLRFQCDADACSATV--------------- 669
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL----CNVSLLITPEILQK 356
+ + + LK + CQ++DIL+ R + L+ L+
Sbjct: 670 -------NGLQIVSLKTSASLWTDCQIADILVAPFRLPDACNHVPVAERPLVFDETSLRS 722
Query: 357 QGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
GS+ I + + +D A+ PW +HR
Sbjct: 723 GGSVAIHLGADGSLSDATVER---AVIGSPRPWNRHR 756
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
P + +EG+ARLS PSGPA+PG +DF FS+++ G+S G+F P E+ ++
Sbjct: 211 PVGSRLEGLARLSAPSGPAYPGGYDFAFSAWFDGLSGSGFFLGAPTATRPVEAVSS---- 266
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSF 124
I +++ + IR ++ G A+ ++ I +A+ILAI L
Sbjct: 267 -IQAVRDGLASLIRQSVPGEGGGIAAALIVGDRSGISAPTTEALRRSGLAHILAISGLHM 325
Query: 125 VVIPAGLIAILLMILSL 141
++ + L + +L
Sbjct: 326 ALVSLTAMGGLRAVFAL 342
>gi|118589994|ref|ZP_01547398.1| ComEC/Rec2-related protein [Stappia aggregata IAM 12614]
gi|118437491|gb|EAV44128.1| ComEC/Rec2-related protein [Stappia aggregata IAM 12614]
Length = 751
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 65/395 (16%), Positives = 145/395 (36%), Gaps = 34/395 (8%)
Query: 16 TIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+ G+ L P FPG F +F++ ++ + + + + W
Sbjct: 346 ALAGLVLLVIAPERLFFPG-FQMSFAAVICLVAVYDLWRQRDRFGSPGDRVSGWGMATCV 404
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + + + + I HF I YG++ N+L +P+ S +V+P G++A
Sbjct: 405 FLGKWVAGLLVTAL--VAGLATGIIGAHHFSRIAPYGVVGNLLGMPVFSLLVMPMGVLAF 462
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFC 193
+LM L +P VM++G+ +++ +A + GR+ + ++ +
Sbjct: 463 VLMPFGLAALPLAVMSFGVSLLLKVASFTAALDAGGGASGRLDGAAASLLLSALFAGLLL 522
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFS 253
R + + ++I+FT PD+ I+ G+ +A D+ + + SF
Sbjct: 523 PGRKRLLAGFPLLAGLLIVFT---DRPPDIQIAASGSRIAARDETGSLRWAARGRSFATD 579
Query: 254 QWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG 313
W + P + + Q K + + + S + +
Sbjct: 580 LWLQSEGVPDDAILSRKMKSPQRKCDDDGCVVRA------YRIGEGSDSQQQSLPYLAIA 633
Query: 314 VLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITI--------- 364
K + ++ C+ +D+++T I +++C+ L++ E +G++ I +
Sbjct: 634 QPKTFEAFQMDCRYADLIVTD--LIASEICSSRLVLDQETRSARGAVSIWLSASASSQKA 691
Query: 365 ---------IPPSNDNDKVKFIIKSAIENLHFPWT 390
D + AI + PW
Sbjct: 692 ADANGLAGAQGHPPDGKLKIDKLVFAIPDPPRPWH 726
Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 92/241 (38%), Gaps = 22/241 (9%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
T++ ARL PP+GP FPG +D++F ++Y+ I A G+ + P +I +S +
Sbjct: 146 EVGETVQASARLFPPAGPVFPGGYDYSFRAFYQQIGATGFSFGSPTVIKVPDSELGFRPA 205
Query: 72 -KISSIKQSFLNEIRANIGTYGSASASIF--------LIKHFHCIPVYGLIANILAIPIL 122
++ ++ + I+A++ + + + + + +A+ILAI L
Sbjct: 206 VAVAKLRSNIAERIKASLADGPETALIVALLVGDRSGIAEQQEEVLRSAGLAHILAISGL 265
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV- 181
+ G +L+ILSL + L +H +S + +
Sbjct: 266 HMALFAGGAYGAVLLILSLVPV------LTLRWPVHKWAALSALGAAVVYLLLSGGAVAT 319
Query: 182 ---TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS---FSPDLLISEKGNLVALV 235
+++ + + + +++L P + + LVA+
Sbjct: 320 QRSFLMIAIVFIGILVGRRGLTLRSVALAGLVLLVIAPERLFFPGFQMSFAAVICLVAVY 379
Query: 236 D 236
D
Sbjct: 380 D 380
>gi|58617330|ref|YP_196529.1| putative competence locus E protein 3 [Ehrlichia ruminantium str.
Gardel]
gi|58416942|emb|CAI28055.1| Similar to competence locus E protein 3 [Ehrlichia ruminantium str.
Gardel]
Length = 673
Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats.
Identities = 62/380 (16%), Positives = 139/380 (36%), Gaps = 44/380 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I ++++ F A I L P P F +F++ I++ F
Sbjct: 334 ILIDRRHNNFCAIAIAAFIILLCYPEAVLNPS-FQMSFAAVLALIASCDIFTK------- 385
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
I I Q F + + +++ + ++I HFH + G+ N+LAIPI
Sbjct: 386 --------LIIIGDILQYFSSIVLSSL--IAGLATLPYVIYHFHNFSIIGVFVNVLAIPI 435
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSF 180
+F +IP L+ ++L ++L+ + + ++++I++ +S + + S
Sbjct: 436 TTFFIIPLSLLYVVLSFVNLEFYISYALESSVKLLLYISNYVSKIDSLILSFHAVSSVSI 495
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I + FL + ++R +G ++I + LF +PD+L++ V D
Sbjct: 496 LVITLGFLFLCLWNGSLRFLGLVVI---VCGLFIGFQYVTPDILVNINNIAVKESDGQLY 552
Query: 241 ISNY-SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
N ++ FI W +++ + C
Sbjct: 553 SVNKNAHITGFIGLVWAKQNGQQKLLKYNLENDKC-------------------LFCEAG 593
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
C+ + + + + + +C D++I + + + C+ ++ + G
Sbjct: 594 KGCIY-TKQKRKILIAYTSEYVIQNCLDIDLVIQFGKFVYPQECHKQY-LSYVDIISHGP 651
Query: 360 LEITIIPPSNDNDKVKFIIK 379
I ++ K I
Sbjct: 652 YFIWVLDNKVKISKHNNRIW 671
Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 3/132 (2%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
+ I A + PP P +DF+ SY+K I+ IG+ S ++ +S
Sbjct: 148 ENIEIGDKILLSAIVYPPQTAVSPFSYDFSRVSYFKKINGIGFTISNVRLFEKRKSKK-- 205
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ I I+ N+ + S +I I ++ NI I I
Sbjct: 206 IFEYIELIRLHIYKLFLRNLTWDTANVVSALVIGKKDGISN-DIMGNIRNAGIAHLFAIS 264
Query: 129 AGLIAILLMILS 140
++ + +
Sbjct: 265 GLHLSFITGLFF 276
>gi|261758335|ref|ZP_06002044.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261738319|gb|EEY26315.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 679
Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 144/401 (35%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S ++ +
Sbjct: 256 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRAGRKA--AERGFLARMVAPAV 312
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 313 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDW 372
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 373 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 432
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 433 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIK 489
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 490 QIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRD 536
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI I I +L+I+ L +G+LEI +
Sbjct: 537 VACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPAL 596
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 597 VPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 637
Score = 67.1 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 9/135 (6%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN--TWTWKKI 73
+G L PSGP PG +DF+F +Y+ GI A G+F PK I + I
Sbjct: 51 RADGFCTLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEFSEWI 110
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPILSFVV 126
++++ I+ I A+ + I +A+IL+I L +
Sbjct: 111 ATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGLHMAL 170
Query: 127 IPAGLIAILLMILSL 141
++ L + +L
Sbjct: 171 AAGVVMLALRSLFAL 185
>gi|260565598|ref|ZP_05836082.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
melitensis bv. 1 str. 16M]
gi|265991225|ref|ZP_06103782.1| LOW QUALITY PROTEIN: DNA uptake protein [Brucella melitensis bv. 1
str. Rev.1]
gi|260151666|gb|EEW86760.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
melitensis bv. 1 str. 16M]
gi|263002009|gb|EEZ14584.1| LOW QUALITY PROTEIN: DNA uptake protein [Brucella melitensis bv. 1
str. Rev.1]
Length = 679
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 144/401 (35%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S ++ +
Sbjct: 256 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRAGRKA--AERGFLARMVAPAV 312
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 313 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDW 372
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 373 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 432
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 433 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIK 489
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 490 QIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRD 536
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI I I +L+I+ L +G+LEI +
Sbjct: 537 VACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPAL 596
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 597 VPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 637
Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Query: 28 GPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE--SHNTWTWKKISSIKQSFLNEIR 85
P PG +DF+F +Y+ GI A G+F PK I + + + I++++ I+
Sbjct: 63 RPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPLQTLSAEFSEWIATLRVRVSERIQ 122
Query: 86 ANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPILSFVVIPAGLIAILLMI 138
I A+ + I +A+IL+I L + ++ L +
Sbjct: 123 EVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGLHMALAAGVVMLALRSL 182
Query: 139 LSL 141
+L
Sbjct: 183 FAL 185
>gi|17987122|ref|NP_539756.1| COME operon protein 3 [Brucella melitensis bv. 1 str. 16M]
gi|256044801|ref|ZP_05447705.1| COME operon protein 3 [Brucella melitensis bv. 1 str. Rev.1]
gi|17982785|gb|AAL52020.1| come operon protein 3 [Brucella melitensis bv. 1 str. 16M]
gi|326409163|gb|ADZ66228.1| ComEC/Rec2-related protein [Brucella melitensis M28]
gi|326538873|gb|ADZ87088.1| come operon protein 3 [Brucella melitensis M5-90]
Length = 565
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/423 (18%), Positives = 147/423 (34%), Gaps = 49/423 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 120 LFVDRATISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 178
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 179 RAGRKA--AERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 236
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G +P + V
Sbjct: 237 ISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALV 296
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-L 240
+ L+ V T ++ + ++ + + P+ PD+++SE LV + ++
Sbjct: 297 LWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSF 353
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
N P F WKSA + P + + F+C +
Sbjct: 354 AVNRDRPSKFTIDNWKSAYLIKQIIEPQKGTKK------------NNAGSSSGFICEEG- 400
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGS 359
C R + + M ++C + DI I I +L+I+ L +G+
Sbjct: 401 VCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGT 460
Query: 360 LEITII----------------------------PPSNDNDKVKFIIKSAIENLHFPWTK 391
LEI + P + + A++ PW
Sbjct: 461 LEIRLGGQLSIASDKADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHL 520
Query: 392 HRI 394
HR+
Sbjct: 521 HRL 523
>gi|306841870|ref|ZP_07474550.1| ComEC/Rec2-related protein [Brucella sp. BO2]
gi|306288000|gb|EFM59402.1| ComEC/Rec2-related protein [Brucella sp. BO2]
Length = 825
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/401 (19%), Positives = 148/401 (36%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S S ++ +
Sbjct: 402 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRASRKAG--ERGFLARMVAPAV 458
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 459 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDW 518
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 519 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 578
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ +N P F WKSA +
Sbjct: 579 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAANRDRPSKFTIDNWKSAYLIK 635
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 636 KIIEPQKGTKK------------NNAGNNGGFICEEG-VCFVTLRDGRTLSYTADETMRD 682
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI+I I +L+I+ L +G+LEI +
Sbjct: 683 VACNIGDIVILAIPGKGAECESEQTLVISKRDLALKGTLEIRLGGQLSIASDEANSKPAL 742
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + + A++ PW HR+
Sbjct: 743 VPPKSGLEAEQLPNRSAFQYYRDQLTFAVDAPSRPWHLHRL 783
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 183 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 242
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 243 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 302
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 303 LAHILSISGLHMALAAGVVMLALRSLFAL 331
>gi|265999445|ref|ZP_06111693.1| ComEC/Rec2 family protein [Brucella melitensis bv. 2 str. 63/9]
gi|263093994|gb|EEZ17928.1| ComEC/Rec2 family protein [Brucella melitensis bv. 2 str. 63/9]
Length = 584
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 80/423 (18%), Positives = 147/423 (34%), Gaps = 49/423 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 139 LFVDRATISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 197
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 198 RAGRKA--AERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 255
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G +P + V
Sbjct: 256 ISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALV 315
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-L 240
+ L+ V T ++ + ++ + + P+ PD+++SE LV + ++
Sbjct: 316 LWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSF 372
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
N P F WKSA + P + + F+C +
Sbjct: 373 AVNRDRPSKFTIDNWKSAYLIKQIIEPQKGTKK------------NNAGSSSGFICEEG- 419
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGS 359
C R + + M ++C + DI I I +L+I+ L +G+
Sbjct: 420 VCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGT 479
Query: 360 LEITII----------------------------PPSNDNDKVKFIIKSAIENLHFPWTK 391
LEI + P + + A++ PW
Sbjct: 480 LEIRLGGQLSIASDKADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHL 539
Query: 392 HRI 394
HR+
Sbjct: 540 HRL 542
>gi|84503086|ref|ZP_01001182.1| competence protein [Oceanicola batsensis HTCC2597]
gi|84388630|gb|EAQ01502.1| competence protein [Oceanicola batsensis HTCC2597]
Length = 683
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 62/390 (15%), Positives = 126/390 (32%), Gaps = 63/390 (16%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L ++ F A + + P PG F +F++ ++ G
Sbjct: 343 LVFDRRAITFRALAMAALVVLVLRPEALLSPG-FQMSFAATTALVAVFG----------- 390
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + + HF+ + YGL AN+LA+P+
Sbjct: 391 -----GLRGRARLRSRLLRGVMAVVVSSSVAGLATAPVGAAHFNTMAHYGLAANLLAVPL 445
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSF 180
+ +V+PAG++A++LM L L+ + VM WGLD+I+ IA ++ P
Sbjct: 446 MGMLVMPAGVVAVVLMPLGLEALALTVMGWGLDVILFIARTVASWPGAVGHVPAPGEWVL 505
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
L + + +R +G + + + + P +LI ++G LV ++ +N
Sbjct: 506 PLFAAGGLSLALWQGPLRWLGLVPLLVAGG---LWTQVDRPGILIDDRGALVGVLGENGR 562
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + F+ W + +A Q
Sbjct: 563 ALSRAKGAGFVAQVWLENDGSGREQAAAAALWPAQ------------------------- 597
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ + ++ +C +IL+ C + +P L G++
Sbjct: 598 --------GRVRHLTGKRRAEAATCAQGEILVLNHDPPGDPGCE---VFSPRRLHGLGAV 646
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
IT + + W
Sbjct: 647 AITRDATGLHIRSARAV------AGRRLWN 670
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 46/235 (19%), Positives = 90/235 (38%), Gaps = 16/235 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A T+ A LSPP+GP PG FDF +++ + A+GY + + T +
Sbjct: 163 AGLTVMTTAHLSPPAGPVEPGGFDFQRHAWFARLGAVGYTRVPVVALRPPDPGAT----R 218
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
+ + + + +R + A A+ + + +A++LAI L
Sbjct: 219 VFRARMALSDRVRGVLAGDTGAFAAAVMAGDRSGLSREVTETLRRTNLAHLLAISGLHMG 278
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR--IPETSFVTI 183
++ + A L L+ +P+ + W + + + + A G E +FV
Sbjct: 279 LVAGFVYAALR--LAGAAVPYTALRWPVRSVAALVAVAAGAGYLMLSGGSIATERAFVMA 336
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP-YSFSPDLLISEKGNLVALVDK 237
V + +VF + I M + +++L S + + LVA+
Sbjct: 337 AVALVALVFDRRAITFRALAMAALVVLVLRPEALLSPGFQMSFAATTALVAVFGG 391
>gi|149184610|ref|ZP_01862928.1| predicted membrane metal-binding protein [Erythrobacter sp. SD-21]
gi|148831930|gb|EDL50363.1| predicted membrane metal-binding protein [Erythrobacter sp. SD-21]
Length = 721
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 61/376 (16%), Positives = 125/376 (33%), Gaps = 29/376 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ ++ + L P P +F + + AI ++ +
Sbjct: 367 LALGREPLSMRMVAAAAAVVLLIWPESLVGP-----SFQMSFAAVIAIVALHNARPVRDF 421
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ +S + G + + ++ HFH +YG AN++AIP+
Sbjct: 422 LAPQEEVWVRWLSR-----RILMLFVTGLVIEIALTPIVLFHFHRAGLYGAFANVIAIPL 476
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSF 180
++FV +P IA+ L ++ L + LD+++ IAH + + I +
Sbjct: 477 VTFVSMPLIAIALTLDLIGLGAPVWWFAGQSLDLLLLIAHTTAEQPGAVRLVPHIGLPTV 536
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ V L + + R +G + + ++L PD+LI+ G V LVD +
Sbjct: 537 LLCVAGGLWLALWRGRARILGLVPASLGALLLSISAA---PDILIARDGRDVGLVDGDGR 593
Query: 241 I-SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ +P S+ T + ++R L +
Sbjct: 594 LFVLRDSPGSYAQENLVELAGTEALPHSMDTWPGARCSADFCSLPVVRGGGTWHLLLARS 653
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ + + +C+ +DI+I + + L L L G
Sbjct: 654 RQQI-------------DERALAAACERADIVIASRWLPRSCL-PRWLKADGRYLAANGG 699
Query: 360 LEITIIPPSNDNDKVK 375
I + D +
Sbjct: 700 TAIYLADERIDTVGSR 715
>gi|260168847|ref|ZP_05755658.1| ComEC/Rec2 family protein, putative [Brucella sp. F5/99]
Length = 584
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 80/423 (18%), Positives = 147/423 (34%), Gaps = 49/423 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 139 LFVDRAAISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 197
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 198 RAGRKA--AERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 255
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G +P + V
Sbjct: 256 ISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALV 315
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-L 240
+ L+ V T ++ + ++ + + P+ PD+++SE LV + ++
Sbjct: 316 LWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSF 372
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
N P F WKSA + P + + F+C +
Sbjct: 373 AVNRDRPSKFTIDNWKSAYLIKQIIEPQKGTKK------------NNAGSSSGFICEEG- 419
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGS 359
C R + + M ++C + DI I I +L+I+ L +G+
Sbjct: 420 VCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGT 479
Query: 360 LEITII----------------------------PPSNDNDKVKFIIKSAIENLHFPWTK 391
LEI + P + + A++ PW
Sbjct: 480 LEIRLGGQLSIASDKADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHL 539
Query: 392 HRI 394
HR+
Sbjct: 540 HRL 542
>gi|254475818|ref|ZP_05089204.1| competence protein [Ruegeria sp. R11]
gi|214030061|gb|EEB70896.1| competence protein [Ruegeria sp. R11]
Length = 689
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 60/392 (15%), Positives = 128/392 (32%), Gaps = 40/392 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A + P PG F +F++ I+
Sbjct: 333 VVLDRRALSLRAVALAALLILALRPESLLGPG-FQMSFAATTALIAVFSALQ-------- 383
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
W+ S+ + + + F HF+ + +GL+AN+LA+P+
Sbjct: 384 -------AWQLPPSLWWARGAVGVVLSSVVAGIATAPFAAAHFNQLSQFGLLANVLAVPV 436
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS-F 180
+ +V+P+ ++A+ L + I M G+ I+ +A ++ +P S
Sbjct: 437 MGLLVVPSAVLALCLAPIGGGWIGLWGMDLGIRWILWVAGWVAGMDGAVRPVEMPPPSVL 496
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
I +++ + +R G+I I L + + P +LIS +G LV ++ +
Sbjct: 497 GLIAFGGIMLAVWRGPLRWSGTIAICGG---LLIWAQAGRPVVLISPEGGLVGVMTEQGR 553
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ S F S+W T + + +
Sbjct: 554 ALSRSRGQGFAASRWAENDGTLLTQEDAAALW-----------PDPAVVPDWGHTLKGRH 602
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ ++ V+ + + DI++ + R L ++ L+K GSL
Sbjct: 603 AVLALPDGAWLIHVMGKAAHAAPIPCVPDIILVSDRADKLPLTGGCRVMDAITLRKTGSL 662
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ + + WT
Sbjct: 663 AL---------LADGRWLTAREVAGDRAWTLR 685
Score = 43.6 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 47/147 (31%), Gaps = 2/147 (1%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+ + A L PP GP P FDF ++++ + A+GY ++
Sbjct: 143 ISLADGVFAPAIGARVMTTAHLMPPQGPVEPRGFDFRRHAWFQKLGAVGYTRVPVLLVEE 202
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY--GLIANILAI 119
+ + + G + + + +A++LAI
Sbjct: 203 PGADLAIARMRAALSGAIRSRMAPETAGFAAAITTGERADIPQAELDALRASNLAHLLAI 262
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPF 146
L ++ + + + +L
Sbjct: 263 SGLHMGLLAGVVFGGIRLGFALMPPVA 289
>gi|58579276|ref|YP_197488.1| putative competence locus E protein 3 [Ehrlichia ruminantium str.
Welgevonden]
gi|58417902|emb|CAI27106.1| Similar to competence locus E protein 3 [Ehrlichia ruminantium str.
Welgevonden]
Length = 673
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 60/380 (15%), Positives = 137/380 (36%), Gaps = 44/380 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I ++++ F A I L P P F +F++ I++ F
Sbjct: 334 ILIDRRHNNFRAIAIAAFIILLCYPEAVLNPS-FQMSFAAVLALIASCDIFTK------- 385
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
I I Q F + + +++ + ++I HFH + G+ N+LAIP+
Sbjct: 386 --------LIIIGDILQYFSSIVLSSL--IAGLATLPYVIYHFHNFSIIGVFVNVLAIPV 435
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSF 180
+F +IP L+ ++L ++L+ + + ++++++ +S + + S
Sbjct: 436 TTFFIIPLSLLYVVLSFVNLEFYISYALESSVKLLLYVSSYVSKIDSLILSFHAVSSVSI 495
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I + FL + ++R +G ++I + LF +PD+L++ V D
Sbjct: 496 LIITLGFLFLCLWNGSLRFLGLVVI---VCGLFIGFQYVTPDILVNINNIAVKESDGQLY 552
Query: 241 ISNY-SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
N ++ FI W +++ C
Sbjct: 553 SVNKNAHITGFIGLVWAKQNGQQKLLKYNLENAKC-------------------LFCEAG 593
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
C+ + + + + + +C D++I + + + C+ ++ + G
Sbjct: 594 KGCIY-TKQKRKILIAYTSEYVIQNCLDIDLVIQFGKFVYPQECHKQY-LSYVDIISHGP 651
Query: 360 LEITIIPPSNDNDKVKFIIK 379
I ++ K I
Sbjct: 652 YFIWVLDNKVKISKHNNRIW 671
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 3/132 (2%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
+ I A + PP P +DF+ SY+K I+ IG+ S ++ +S
Sbjct: 148 ENIEIGDRILLSAIVYPPQTAVSPFSYDFSRVSYFKKINGIGFTISNVRLFEKRKSKK-- 205
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ I I+ N+ + S +I I ++ NI I I
Sbjct: 206 IFEYIELIRLHIYKLFLRNLTWDTANVVSALVIGKKDGISN-DIMGNIRNAGIAHLFAIS 264
Query: 129 AGLIAILLMILS 140
++ + +
Sbjct: 265 GLHLSFITGLFF 276
>gi|254693854|ref|ZP_05155682.1| ComEC/Rec2-related protein [Brucella abortus bv. 3 str. Tulya]
gi|261214139|ref|ZP_05928420.1| DNA uptake protein [Brucella abortus bv. 3 str. Tulya]
gi|260915746|gb|EEX82607.1| DNA uptake protein [Brucella abortus bv. 3 str. Tulya]
Length = 840
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 82/409 (20%), Positives = 147/409 (35%), Gaps = 51/409 (12%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
I IA P P F +FS+ I+A ++ +S ++
Sbjct: 411 AIAMIAL--SPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRAGRKA--AERGFL 465
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ ++ IF HF+ GL+ N+LA+P +S +V+P G+ ++
Sbjct: 466 ARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLV 525
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
LM L LD +P VM GL + HIA ++ + G +P + V + L+ V T
Sbjct: 526 LMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTT 585
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQ 254
++ + ++ + + P+ PD+++SE LV + ++ N P F
Sbjct: 586 RLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDN 642
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
WKSA + P + + F+C + C R +
Sbjct: 643 WKSAYLIKQIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSY 689
Query: 315 LKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII-------- 365
+ M ++C + DI I I +L+I+ L +G+LEI +
Sbjct: 690 TADETMRDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASD 749
Query: 366 --------------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 750 KADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 798
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|23502023|ref|NP_698150.1| ComEC/Rec2 family protein [Brucella suis 1330]
gi|23347976|gb|AAN30065.1| ComEC/Rec2 family protein, putative [Brucella suis 1330]
Length = 843
Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 144/401 (35%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S ++ +
Sbjct: 420 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSGAGRKA--AERGFLARMVAPAV 476
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 477 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDW 536
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 537 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 596
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 597 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIK 653
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 654 QIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRD 700
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI I I +L+I+ L +G+LEI +
Sbjct: 701 VACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPAL 760
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 761 VPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|161619097|ref|YP_001592984.1| ComEC/Rec2-related protein [Brucella canis ATCC 23365]
gi|260566320|ref|ZP_05836790.1| DNA uptake protein [Brucella suis bv. 4 str. 40]
gi|161335908|gb|ABX62213.1| ComEC/Rec2-related protein [Brucella canis ATCC 23365]
gi|260155838|gb|EEW90918.1| DNA uptake protein [Brucella suis bv. 4 str. 40]
Length = 843
Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 144/401 (35%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S ++ +
Sbjct: 420 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRAGRKA--AERGFLARMVASAV 476
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 477 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDW 536
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 537 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 596
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 597 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIK 653
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 654 QIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRD 700
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI I I +L+I+ L +G+LEI +
Sbjct: 701 VACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPAL 760
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 761 VPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+ +IL+I L + ++ L + +L
Sbjct: 321 LTHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|57239310|ref|YP_180446.1| putative competence locus E protein 3 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161389|emb|CAH58313.1| putative competence protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 650
Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 60/380 (15%), Positives = 137/380 (36%), Gaps = 44/380 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I ++++ F A I L P P F +F++ I++ F
Sbjct: 311 ILIDRRHNNFRAIAIAAFIILLCYPEAVLNPS-FQMSFAAVLALIASCDIFTK------- 362
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
I I Q F + + +++ + ++I HFH + G+ N+LAIP+
Sbjct: 363 --------LIIIGDILQYFSSIVLSSL--IAGLATLPYVIYHFHNFSIIGVFVNVLAIPV 412
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSF 180
+F +IP L+ ++L ++L+ + + ++++++ +S + + S
Sbjct: 413 TTFFIIPLSLLYVVLSFVNLEFYISYALESSVKLLLYVSSYVSKIDSLILSFHAVSSVSI 472
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I + FL + ++R +G ++I + LF +PD+L++ V D
Sbjct: 473 LIITLGFLFLCLWNGSLRFLGLVVI---VCGLFIGFQYVTPDILVNINNIAVKESDGQLY 529
Query: 241 ISNY-SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
N ++ FI W +++ C
Sbjct: 530 SVNKNAHITGFIGLVWAKQNGQQKLLKYNLENAKC-------------------LFCEAG 570
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
C+ + + + + + +C D++I + + + C+ ++ + G
Sbjct: 571 KGCIY-TKQKRKILIAYTSEYVIQNCLDIDLVIQFGKFVYPQECHKQY-LSYVDIISHGP 628
Query: 360 LEITIIPPSNDNDKVKFIIK 379
I ++ K I
Sbjct: 629 YFIWVLDNKVKISKHNNRIW 648
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 3/132 (2%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
+ I A + PP P +DF+ SY+K I+ IG+ S ++ +S
Sbjct: 125 ENIEIGDRILLSAIVYPPQTAVSPFSYDFSRVSYFKKINGIGFTISNVRLFEKRKSKK-- 182
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ I I+ N+ + S +I I ++ NI I I
Sbjct: 183 IFEYIELIRLHIYKLFLRNLTWDTANVVSALVIGKKDGISN-DIMGNIRNAGIAHLFAIS 241
Query: 129 AGLIAILLMILS 140
++ + +
Sbjct: 242 GLHLSFITGLFF 253
>gi|254719208|ref|ZP_05181019.1| ComEC/Rec2-related protein [Brucella sp. 83/13]
gi|265984204|ref|ZP_06096939.1| DNA uptake protein [Brucella sp. 83/13]
gi|306837956|ref|ZP_07470814.1| ComEC/Rec2-related protein [Brucella sp. NF 2653]
gi|264662796|gb|EEZ33057.1| DNA uptake protein [Brucella sp. 83/13]
gi|306406880|gb|EFM63101.1| ComEC/Rec2-related protein [Brucella sp. NF 2653]
Length = 843
Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 81/423 (19%), Positives = 147/423 (34%), Gaps = 49/423 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 398 LFVDRAAISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 456
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 457 RAGRKAG--ERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 514
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G IP + V
Sbjct: 515 ISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAIPGPALV 574
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-L 240
+ L+ V T ++ + ++ + + P+ PD+++SE LV + ++
Sbjct: 575 LWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSF 631
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
N P F WKSA + P + + F+C +
Sbjct: 632 AVNRDRPSKFTIDNWKSAYLIKKIIEPQKGTKK------------NTAGSNGGFICEEG- 678
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGS 359
C R + + M ++C + DI I I +L+I+ L +G+
Sbjct: 679 VCFVTLRDGRTLSYTADETMGDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGT 738
Query: 360 LEITII----------------------------PPSNDNDKVKFIIKSAIENLHFPWTK 391
LEI + P + + A++ PW
Sbjct: 739 LEIRLEGQLSIASDEADSKPALVPPKLGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHL 798
Query: 392 HRI 394
HR+
Sbjct: 799 HRL 801
Score = 76.0 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAE 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|254704433|ref|ZP_05166261.1| ComEC/Rec2-related protein [Brucella suis bv. 3 str. 686]
gi|261755110|ref|ZP_05998819.1| DNA uptake protein [Brucella suis bv. 3 str. 686]
gi|261744863|gb|EEY32789.1| DNA uptake protein [Brucella suis bv. 3 str. 686]
Length = 843
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 144/401 (35%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S ++ +
Sbjct: 420 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRAGRKA--AERGFLARMVAPAV 476
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 477 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDW 536
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 537 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 596
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 597 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIK 653
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 654 QIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRD 700
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI I I +L+I+ L +G+LEI +
Sbjct: 701 VACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPAL 760
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 761 VPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+ +IL+I L + ++ L + +L
Sbjct: 321 LTHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|294852485|ref|ZP_06793158.1| competence protein ComEC [Brucella sp. NVSL 07-0026]
gi|294821074|gb|EFG38073.1| competence protein ComEC [Brucella sp. NVSL 07-0026]
Length = 843
Score = 179 bits (453), Expect = 7e-43, Method: Composition-based stats.
Identities = 80/423 (18%), Positives = 147/423 (34%), Gaps = 49/423 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 398 LFVDRAAISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 456
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 457 RAGRKA--AERGFLARMVAPAVAIGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 514
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G +P + V
Sbjct: 515 ISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALV 574
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-L 240
+ L+ V T ++ + ++ + + P+ PD+++SE LV + ++
Sbjct: 575 LWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSF 631
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
N P F WKSA + P + + F+C +
Sbjct: 632 AVNRDRPSKFTIDNWKSAYLIKQIIEPQKGTKK------------NNAGSSSGFICEEG- 678
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGS 359
C R + + M ++C + DI I I +L+I+ L +G+
Sbjct: 679 VCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGT 738
Query: 360 LEITII----------------------------PPSNDNDKVKFIIKSAIENLHFPWTK 391
LEI + P + + A++ PW
Sbjct: 739 LEIRLGGQLSIASDKADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHL 798
Query: 392 HRI 394
HR+
Sbjct: 799 HRL 801
Score = 76.0 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|296283864|ref|ZP_06861862.1| ComEC/Rec2-related protein [Citromicrobium bathyomarinum JL354]
Length = 753
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 65/387 (16%), Positives = 132/387 (34%), Gaps = 37/387 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY-SIPKMIYSSES 64
++ F G L P P +F + + AI + S P + +
Sbjct: 385 REPLTFRLLAVAAGFVLLLWPESVVGP-----SFQMSFAAVLAIVALHNSAPVRAFLAPR 439
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W + + + G + ++ HFH +YG +AN++ IP+++F
Sbjct: 440 EEAWFMRPLR------GGAMLLVTGFVIEIALMPIVLFHFHRTGMYGALANMVGIPLVTF 493
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFVTI 183
V +P +A+L ++ + + LD+++ IAH + + + +F
Sbjct: 494 VSMPLIALALLADLVGAGAPVWWLAGASLDLLLGIAHLTASQPGAVKLAPHMGGLAFGLF 553
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
V L + R G + + I I++ + PD+L+S G VA+++ L+S
Sbjct: 554 VAGGLWIALWSGRGRFWGFVPVLIATILML---STSRPDVLVSRDGRDVAIIEGGRLMSL 610
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ S+ P Q + + + I R + + L + V
Sbjct: 611 RDSQSSYASDTLAELGALDEPPLPLSQWPGARCSAEFCVATIEREGRRYRLLLARGREYV 670
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
+ + +C DI++ + L +L+K G L I
Sbjct: 671 -------------TERDLAAACARVDIVVADRWLPYSC-RPRWLKADRRMLEKTGGLAIR 716
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ + + + H W
Sbjct: 717 LSSREVE-------TVAQGQGAHGWWH 736
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 56/140 (40%), Gaps = 11/140 (7%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ I ARL PP+ P PG +DF +++++G++A G +I
Sbjct: 192 LEQESPAMQRGAVIGLTARLMPPAPPLVPGGYDFARAAWFQGLAATGSVVGPVDVIAPPP 251
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANI 116
I+S++++ +R+ +G + A+ F I + ++
Sbjct: 252 PGLG----GIASVQRNLSAHVRSQLGGSAGSIAAAFASGDRGAIAEADEVAMRDAGLTHL 307
Query: 117 LAIPILSFVVIPAGLIAILL 136
L+I L + A + L
Sbjct: 308 LSISGLHVSAVVAAAYFLAL 327
>gi|256061228|ref|ZP_05451379.1| ComEC/Rec2-related protein [Brucella neotomae 5K33]
gi|261325235|ref|ZP_05964432.1| DNA uptake protein [Brucella neotomae 5K33]
gi|261301215|gb|EEY04712.1| DNA uptake protein [Brucella neotomae 5K33]
Length = 843
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 144/401 (35%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S ++ +
Sbjct: 420 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRAGRKA--AERGFLARMVAPAV 476
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 477 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDW 536
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 537 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 596
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 597 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIK 653
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 654 QIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRD 700
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI I I +L+I+ L +G+LEI +
Sbjct: 701 VACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPAL 760
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 761 VPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|254689370|ref|ZP_05152624.1| ComEC/Rec2-related protein [Brucella abortus bv. 6 str. 870]
Length = 849
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 144/401 (35%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S ++ +
Sbjct: 426 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRAGRKA--AERGFLARMVAPAV 482
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 483 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDW 542
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 543 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 602
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 603 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIK 659
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 660 QIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRD 706
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI I I +L+I+ L +G+LEI +
Sbjct: 707 VACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPAL 766
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 767 VPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 807
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 266
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 267 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 326
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 327 LAHILSISGLHMALAAGVVMLALRSLFAL 355
>gi|254706671|ref|ZP_05168499.1| ComEC/Rec2-related protein [Brucella pinnipedialis M163/99/10]
gi|254710221|ref|ZP_05172032.1| ComEC/Rec2-related protein [Brucella pinnipedialis B2/94]
gi|256031715|ref|ZP_05445329.1| ComEC/Rec2-related protein [Brucella pinnipedialis M292/94/1]
gi|256369571|ref|YP_003107081.1| ComEC/Rec2 family protein, putative [Brucella microti CCM 4915]
gi|261314132|ref|ZP_05953329.1| DNA uptake protein [Brucella pinnipedialis M163/99/10]
gi|261317779|ref|ZP_05956976.1| DNA uptake protein [Brucella pinnipedialis B2/94]
gi|265988810|ref|ZP_06101367.1| DNA uptake protein [Brucella pinnipedialis M292/94/1]
gi|255999733|gb|ACU48132.1| ComEC/Rec2 family protein, putative [Brucella microti CCM 4915]
gi|261297002|gb|EEY00499.1| DNA uptake protein [Brucella pinnipedialis B2/94]
gi|261303158|gb|EEY06655.1| DNA uptake protein [Brucella pinnipedialis M163/99/10]
gi|264661007|gb|EEZ31268.1| DNA uptake protein [Brucella pinnipedialis M292/94/1]
Length = 843
Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats.
Identities = 80/423 (18%), Positives = 147/423 (34%), Gaps = 49/423 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 398 LFVDRAAISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 456
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 457 RAGRKA--AERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 514
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G +P + V
Sbjct: 515 ISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALV 574
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-L 240
+ L+ V T ++ + ++ + + P+ PD+++SE LV + ++
Sbjct: 575 LWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSF 631
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
N P F WKSA + P + + F+C +
Sbjct: 632 AVNRDRPSKFTIDNWKSAYLIKQIIEPQKGTKK------------NNAGSSSGFICEEG- 678
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGS 359
C R + + M ++C + DI I I +L+I+ L +G+
Sbjct: 679 VCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGT 738
Query: 360 LEITII----------------------------PPSNDNDKVKFIIKSAIENLHFPWTK 391
LEI + P + + A++ PW
Sbjct: 739 LEIRLGGQLSIASDKADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHL 798
Query: 392 HRI 394
HR+
Sbjct: 799 HRL 801
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|256257616|ref|ZP_05463152.1| ComEC/Rec2-related protein [Brucella abortus bv. 9 str. C68]
gi|260754887|ref|ZP_05867235.1| DNA uptake protein [Brucella abortus bv. 6 str. 870]
gi|260883899|ref|ZP_05895513.1| DNA uptake protein [Brucella abortus bv. 9 str. C68]
gi|297248458|ref|ZP_06932176.1| competence protein ComEC [Brucella abortus bv. 5 str. B3196]
gi|260674995|gb|EEX61816.1| DNA uptake protein [Brucella abortus bv. 6 str. 870]
gi|260873427|gb|EEX80496.1| DNA uptake protein [Brucella abortus bv. 9 str. C68]
gi|297175627|gb|EFH34974.1| competence protein ComEC [Brucella abortus bv. 5 str. B3196]
Length = 843
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 144/401 (35%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S ++ +
Sbjct: 420 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRAGRKA--AERGFLARMVAPAV 476
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 477 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDW 536
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 537 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 596
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 597 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIK 653
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 654 QIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRD 700
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI I I +L+I+ L +G+LEI +
Sbjct: 701 VACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPAL 760
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 761 VPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 76.0 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|94496456|ref|ZP_01303033.1| ComEC/Rec2-related protein [Sphingomonas sp. SKA58]
gi|94424202|gb|EAT09226.1| ComEC/Rec2-related protein [Sphingomonas sp. SKA58]
Length = 695
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 60/381 (15%), Positives = 135/381 (35%), Gaps = 37/381 (9%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK-MIYSSESHNTWT 69
T I P P +F + ++AI P+ +++ W+
Sbjct: 335 LRLVATGALIVLFLWPESLVGP-----SFQMSFAAVTAIVALAEHPRFRAFAAAREENWS 389
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
WK ++ + G + HFH + G AN++AIP+ +FVV+P
Sbjct: 390 WKLTRAL------AVTLATGLVVELVLMPIALFHFHKAGLLGAFANLIAIPLTTFVVMPL 443
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFL 188
++A+L ++ L + + LD+++ +AH ++ + + ++V L
Sbjct: 444 EVLALLFDLVGLGAPFWWLTGHALDLLLAVAHGVAASPLATLLAPAMRPVLFALVIVGLL 503
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP 248
+ +T R +G + + + ++ + PDLL++ G VA+ + +
Sbjct: 504 WCLLWRTRWRWLGLPPVLVGVALVL---VAAPPDLLVTGDGRHVAVRSGSGMAILRDRAG 560
Query: 249 SFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRS 308
++ + + + ++ +++ + RS
Sbjct: 561 DYVRDTLSESAGYEGDLSAIADLPMARCSTDLCALDMHDPA--------GRTWRLLLTRS 612
Query: 309 DVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPS 368
D+++ + +C +DI+I+ R L I ++L + G L I++
Sbjct: 613 DMLI----DRPAFAPACARADIVISDRRLPLWC-RPRWLRIDRQLLARTGGLSISLEEGE 667
Query: 369 NDNDKVKFIIKSAIENLHFPW 389
+ PW
Sbjct: 668 --------VHTVHRPGDAHPW 680
>gi|163843410|ref|YP_001627814.1| ComEC/Rec2-related protein [Brucella suis ATCC 23445]
gi|163674133|gb|ABY38244.1| ComEC/Rec2-related protein [Brucella suis ATCC 23445]
Length = 843
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 144/401 (35%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S ++ +
Sbjct: 420 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRAGRKA--AERGFLARMVAPAV 476
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 477 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDW 536
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 537 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 596
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI-SNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 597 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFPVNRDRPSKFTIDNWKSAYLIK 653
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 654 QIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRD 700
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI I I +L+I+ L +G+LEI +
Sbjct: 701 VACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPAL 760
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 761 VPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|254440053|ref|ZP_05053547.1| Competence protein [Octadecabacter antarcticus 307]
gi|198255499|gb|EDY79813.1| Competence protein [Octadecabacter antarcticus 307]
Length = 697
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 65/387 (16%), Positives = 132/387 (34%), Gaps = 49/387 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ A I P PG F +F++ ++ G
Sbjct: 339 DRRALTLRAVAIAALIVLTLLPEALFGPG-FQMSFAATTALVAVFGVMRQ---------- 387
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ +S +++ + + F HF+ I GLIAN++++P++
Sbjct: 388 ---LDLPRVPRWAKSIGAVFISSL--VAGLATAPFAAFHFNQIAQLGLIANLMSVPLMGT 442
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFVTI 183
+V+PA ++A LL L L+ I VM GL I+ +AH ++ P I
Sbjct: 443 LVMPAAVLAALLAPLGLEMIGLWVMDLGLRWILGVAHFVAGQDGALRHVVTPGPEVLALI 502
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ + +V + +IR G + I+ + + P +LI++ G+L+ ++ + +
Sbjct: 503 ALGGIFVVQWRGSIRLAGVAPV---ILGFALWQVAERPAVLIADSGSLIGVMTETGRDVS 559
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ SF W P + ++ L E+ ++ V
Sbjct: 560 KESGESFAADSWLENDGAPVEQWVAYARDGLLERG--------------------RAVSV 599
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
+ V+ C +DI+IT + C + L++ G++
Sbjct: 600 TVAGTRVLNLRGATALAAIDGCGGADIVITNQEMGDMAGCE---VYDAVRLRETGAMA-- 654
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWT 390
+I W
Sbjct: 655 ----GWVLSGKLHLISVRDHTGERIWN 677
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 61/154 (39%), Gaps = 11/154 (7%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + LSPPSGP PG FDF ++++G+ A+G Y+ ++ + +
Sbjct: 146 DQGFITPEPGQVVLMTGHLSPPSGPVEPGGFDFQRMAWFEGLGAVG--YTRTPVLLGAVA 203
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANIL 117
+ + + ++ + A A+ + I L +A++L
Sbjct: 204 SEGSAGLWVYRQRVAISRGVQDRLEGESGAFAAAIMTGDRSGIGQNSLTALRAFNLAHLL 263
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
AI + ++ A + A L +L P + W
Sbjct: 264 AISGMHMGILAAFIFATLRYGFAL--WPSAALRW 295
>gi|254701887|ref|ZP_05163715.1| ComEC/Rec2-related protein [Brucella suis bv. 5 str. 513]
gi|261752450|ref|ZP_05996159.1| DNA uptake protein [Brucella suis bv. 5 str. 513]
gi|261742203|gb|EEY30129.1| DNA uptake protein [Brucella suis bv. 5 str. 513]
Length = 843
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/423 (19%), Positives = 148/423 (34%), Gaps = 49/423 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 398 LFVDRAAISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 456
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 457 RAGRKA--AERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 514
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G +P + V
Sbjct: 515 ISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALV 574
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-L 240
+ L+ V T ++ + ++ + + P+ PD+++SE LV + ++
Sbjct: 575 LWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSF 631
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
N P FI WKSA + P + + F+C +
Sbjct: 632 AVNRDRPSKFIIDNWKSAYLIKQIIEPQKGTKK------------NNAGSSSGFICEEG- 678
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGS 359
C R + + M ++C + DI I I +L+I+ L +G+
Sbjct: 679 VCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGT 738
Query: 360 LEITII----------------------------PPSNDNDKVKFIIKSAIENLHFPWTK 391
LEI + P + + A++ PW
Sbjct: 739 LEIRLGGQLSIASDKADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHL 798
Query: 392 HRI 394
HR+
Sbjct: 799 HRL 801
Score = 75.2 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|306844009|ref|ZP_07476604.1| ComEC/Rec2-related protein [Brucella sp. BO1]
gi|306275764|gb|EFM57488.1| ComEC/Rec2-related protein [Brucella sp. BO1]
Length = 843
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/423 (19%), Positives = 147/423 (34%), Gaps = 49/423 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 398 LFVDRAAISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 456
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 457 RAGRKA--AERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 514
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G IP + V
Sbjct: 515 ISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAIPGLALV 574
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-L 240
+ L+ V T ++ + ++ + + P+ PD+++SE LV + ++
Sbjct: 575 LWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSF 631
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
N P F WKSA + P + + F+C +
Sbjct: 632 AVNRDRPSKFTIDNWKSAYLIKKIIEPQKGTKK------------NTAGNSGGFICEEG- 678
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGS 359
C R + + M ++C + DI I I +L+I+ L +G+
Sbjct: 679 VCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAECESEQTLVISKRDLALKGT 738
Query: 360 LEITII----------------------------PPSNDNDKVKFIIKSAIENLHFPWTK 391
LEI + P + + A++ PW
Sbjct: 739 LEIRLGGQLSIASDEADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHL 798
Query: 392 HRI 394
HR+
Sbjct: 799 HRL 801
Score = 73.7 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+ + + G ARL PSG PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISVRDIPASTAIGSGLTGFARLRVPSGQVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|319405824|emb|CBI79456.1| Competence protein [Bartonella sp. AR 15-3]
Length = 754
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 70/380 (18%), Positives = 144/380 (37%), Gaps = 38/380 (10%)
Query: 16 TIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I G+ ++ P P F +FS+ I+A ++ + + + + +
Sbjct: 408 AIAGLVTVAISPHEILGPS-FQMSFSATAALIAAFAWWSEGHFSYKGNTAPSYVGGRVLR 466
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ +++ I+ HF + + G+I+N+LA PI+S +IP GL+++
Sbjct: 467 FV--FLSVVSTCMSSLVAGSASGIYAAYHFSNVALLGIISNVLAFPIVSIFIIPFGLLSV 524
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
M L L+ P VM +G ++I IA+ + G IP ++ + + + + + F K
Sbjct: 525 FSMFLGLEWWPLQVMGFGTSLMIKIAYVVKAISPVLNPGFIPLSALILLSIGLVGLTFLK 584
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
T IR + + L+I++ +V +++ + L ++ +P F S
Sbjct: 585 TAIR---FFFGFFILGGILVCIMQSPIQLIIADNMKIVGVLNDDILYIDHYHPSKFTISL 641
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
W+ + P L+ +F+C C + + +
Sbjct: 642 WEKSFRINKTIKPTKIGPSLK----------------GQFICDDN-ICTTLLENGFKIAI 684
Query: 315 LKRKDMIRLSCQLSDILITTIRDI-NTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
L + C +DI+I T +++ TP+ L +GS+ +
Sbjct: 685 LYGE---TDHCVKADIIIRKHATSNRTCDTTNAIIFTPQQLLSRGSIILNKDKN------ 735
Query: 374 VKFIIKSAIENLHFPWTKHR 393
+ + PW HR
Sbjct: 736 ----TLWSSSGFNRPWNIHR 751
Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 11/159 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI--YSSESHNTWTWK 71
+ G +L SG PG +DF+F +Y+K I A G++ PK I + + +
Sbjct: 210 GDGLYGKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGTPKKILVFQPNTMLGTVLQ 269
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSF 124
KI +++ ++ +G ++ + I +A+IL+I L
Sbjct: 270 KIENLRMQMTEKVSKAVGGEEGKVSAALITGQRGGISNNTNEALRIAGLAHILSISGLHM 329
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
++ + I+ + + + + I IA I
Sbjct: 330 ALLSGVVFIIVRSFFAFFPVFSSY--YSVKKIAAIAALI 366
>gi|265995061|ref|ZP_06107618.1| DNA uptake protein [Brucella melitensis bv. 3 str. Ether]
gi|262766174|gb|EEZ11963.1| DNA uptake protein [Brucella melitensis bv. 3 str. Ether]
Length = 426
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 71/356 (19%), Positives = 130/356 (36%), Gaps = 46/356 (12%)
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ + ++ IF HF+ GL+ N+LA+P +S +V+P
Sbjct: 45 AAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMP 104
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
G+ ++LM L LD +P VM GL + HIA ++ + G +P + V + L
Sbjct: 105 FGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALL 164
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNP 247
+ V T ++ + ++ + + P+ PD+++SE LV + ++ N P
Sbjct: 165 VAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRP 221
Query: 248 PSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHR 307
F WKSA + P + + F+C + C R
Sbjct: 222 SKFTIDNWKSAYLIKQIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLR 268
Query: 308 SDVIVGVLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII- 365
+ + M ++C + DI I I +L+I+ L +G+LEI +
Sbjct: 269 DGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGG 328
Query: 366 ---------------------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 329 QLSIASDKADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 384
>gi|189024298|ref|YP_001935066.1| ComEC/Rec2-related protein [Brucella abortus S19]
gi|237815567|ref|ZP_04594564.1| ComEC/Rec2-related protein [Brucella abortus str. 2308 A]
gi|189019870|gb|ACD72592.1| ComEC/Rec2-related protein [Brucella abortus S19]
gi|237788865|gb|EEP63076.1| ComEC/Rec2-related protein [Brucella abortus str. 2308 A]
Length = 849
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 80/423 (18%), Positives = 147/423 (34%), Gaps = 49/423 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 404 LFVDRAAISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 462
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 463 RAGRKA--AERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 520
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G +P + V
Sbjct: 521 ISILVMPFGVFGLVLMSLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALV 580
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-L 240
+ L+ V T ++ + ++ + + P+ PD+++SE LV + ++
Sbjct: 581 LWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSF 637
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
N P F WKSA + P + + F+C +
Sbjct: 638 AVNRDRPSKFTIDNWKSAYLIKQIIEPQKGTKK------------NNAGSSSGFICEEG- 684
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGS 359
C R + + M ++C + DI I I +L+I+ L +G+
Sbjct: 685 VCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGT 744
Query: 360 LEITII----------------------------PPSNDNDKVKFIIKSAIENLHFPWTK 391
LEI + P + + A++ PW
Sbjct: 745 LEIRLGGQLSIASDKADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHL 804
Query: 392 HRI 394
HR+
Sbjct: 805 HRL 807
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 266
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 267 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 326
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 327 LAHILSISGLHMALAAGVVMLALRSLFAL 355
>gi|62290058|ref|YP_221851.1| ComEC/Rec2 family protein [Brucella abortus bv. 1 str. 9-941]
gi|82699985|ref|YP_414559.1| ComEC/Rec2-like protein [Brucella melitensis biovar Abortus 2308]
gi|254697503|ref|ZP_05159331.1| ComEC/Rec2-related protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254730400|ref|ZP_05188978.1| ComEC/Rec2-related protein [Brucella abortus bv. 4 str. 292]
gi|260546610|ref|ZP_05822349.1| DNA uptake protein [Brucella abortus NCTC 8038]
gi|260758104|ref|ZP_05870452.1| DNA uptake protein [Brucella abortus bv. 4 str. 292]
gi|260761928|ref|ZP_05874271.1| DNA uptake protein [Brucella abortus bv. 2 str. 86/8/59]
gi|62196190|gb|AAX74490.1| ComEC/Rec2 family protein, hypothetical [Brucella abortus bv. 1
str. 9-941]
gi|82616086|emb|CAJ11124.1| ComEC/Rec2-related protein [Brucella melitensis biovar Abortus
2308]
gi|260095660|gb|EEW79537.1| DNA uptake protein [Brucella abortus NCTC 8038]
gi|260668422|gb|EEX55362.1| DNA uptake protein [Brucella abortus bv. 4 str. 292]
gi|260672360|gb|EEX59181.1| DNA uptake protein [Brucella abortus bv. 2 str. 86/8/59]
Length = 843
Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 79/401 (19%), Positives = 144/401 (35%), Gaps = 49/401 (12%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P F +FS+ I+A ++ +S ++ +
Sbjct: 420 LSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFSRAGRKA--AERGFLARMVAPAV 476
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 477 ATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMSLQLDW 536
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+P VM GL + HIA ++ + G +P + V + L+ V T ++ +
Sbjct: 537 LPLQVMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALP 596
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITP 262
++ + + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 597 LLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIK 653
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C + C R + + M
Sbjct: 654 QIIEPQKGTKK------------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRD 700
Query: 323 LSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITII---------------- 365
++C + DI I I +L+I+ L +G+LEI +
Sbjct: 701 VACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPAL 760
Query: 366 ------------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 761 VPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|154248290|ref|YP_001419248.1| ComEC/Rec2-related protein [Xanthobacter autotrophicus Py2]
gi|154162375|gb|ABS69591.1| ComEC/Rec2-related protein [Xanthobacter autotrophicus Py2]
Length = 757
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 60/354 (16%), Positives = 127/354 (35%), Gaps = 36/354 (10%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
P PG +F++ ++A + + W ++
Sbjct: 388 VAGVCVLAFTPEAALDPGT-QMSFAATLALVAAYERLRPMRALPRPDG------WVGQAA 440
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
I + L A + + + I HF + YGL+AN+ A+P +SF+V+P GL+ +L
Sbjct: 441 IWLAVLVGGTALTSLVAGLATAPYGIFHFQRVAPYGLLANLAAMPAVSFMVMPFGLLGVL 500
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCK 194
LM D++ + VM G++I++ ++ I+V + + + + + +
Sbjct: 501 LMPFGFDHLAWPVMGKGIEIMVAVSDAIAVLPGADGRVDPVGAPTLALFSLGLTALCLLR 560
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI-SNYSNPPSFIFS 253
+ + + + +++ P PD+LI+ VA+ + + + +
Sbjct: 561 GWLTAVAIVPFALALLMSGAPP---RPDILIAPDAQTVAVRGPDGRLSVLGARSQRLVVE 617
Query: 254 QWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG 313
QW + +++ F C C +
Sbjct: 618 QWMTREGD--------------------MRKAGAEGLAALFTCDP-LGCTAPLPGGGTIA 656
Query: 314 VLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPP 367
V +R + + C S I++T + ++TPE LQ+ G+L
Sbjct: 657 VSRRAESLEADCLESRIVVTRDVPPRRCP---AQVVTPETLQRTGTLAYHFRKG 707
Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 103/284 (36%), Gaps = 18/284 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ K + P P T + +A+L PP GPA PG DF + ++ GI +GY PK+
Sbjct: 179 LTLRKGWAP-PVGTHVTQLAQLLPPLGPAMPGAHDFGRNPWFAGIGGVGYGLGRPKLAEP 237
Query: 62 SESHNTWTW-KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLI 113
+E + + +++ S IRA++ + A + I +
Sbjct: 238 AEPPLSVRLAMAVEAVRDSLSRRIRASLSGTPAEIAVALVAGDRSAIAPEVEESMRVSGL 297
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-- 171
+IL+I L ++ L A M L +P + + + + +A A
Sbjct: 298 THILSISGLHMALVAGTLFAF--MRGGLALVPALALGFPIKSLAAVAALTGSAAYLVLSG 355
Query: 172 --IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
+ +V+ +L+ +R +G + + + + +
Sbjct: 356 NDVPAQRSFVMTALVLSGVLVGRPALTLRTVGVAGVCV-LAFTPEAALDPGTQMSFAATL 414
Query: 230 NLVALVDKNTLISNYSNPPSFI--FSQWKSALITPFHEAPHVQK 271
LVA ++ + P ++ + W + L+ V
Sbjct: 415 ALVAAYERLRPMRALPRPDGWVGQAAIWLAVLVGGTALTSLVAG 458
>gi|149204800|ref|ZP_01881763.1| competence protein [Roseovarius sp. TM1035]
gi|149141769|gb|EDM29822.1| competence protein [Roseovarius sp. TM1035]
Length = 672
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 60/391 (15%), Positives = 126/391 (32%), Gaps = 55/391 (14%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ A I + P PG F +F++ ++ G+
Sbjct: 335 LERRAFSLRAVAVAAIIVLVLQPEALLGPG-FQMSFAATVGLVAVFGWLRDAGWSRGP-- 391
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
++ I A+ + HF+ +GL+AN++++P++
Sbjct: 392 ----------RWLRPVLAVVIS---SAVAGAATAPVAAAHFNQYAQFGLLANLVSVPLMG 438
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFVT 182
+V+PA ++A LL+ L LD I VM GL I+ +A ++ P
Sbjct: 439 VLVMPAAVLATLLLPLGLDWIALRVMELGLRWILTVADWVAALDGARVPVVAPGPYVLPL 498
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + L +V + R +G + + ++ + + + P +++S+ G L+ ++ +
Sbjct: 499 LALGALFIVLWQGRGRILGVLPV---MVAVALWGAADRPVMIVSDTGGLIGIMTEAGRAL 555
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
N F+ W +
Sbjct: 556 NKPTGGGFVADNWLENDGDDASREVAFARWSED--------------------------- 588
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI-RDINTKLCNVSLLITPEILQKQGSLE 361
V V K + C +++ ++ D ++TPE L+K GSL
Sbjct: 589 -LALAHGVRVMAGKAATDMPDFCDGVMLVVMSVTPDPPPAQHRDCQIVTPETLRKTGSLA 647
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ + + N W
Sbjct: 648 LHLDKAGPRLVSARDT------NGVRLWNSQ 672
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/237 (14%), Positives = 79/237 (33%), Gaps = 23/237 (9%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A + A L P GP PG FDF +++ GI A+GY + + + + +
Sbjct: 154 AGQRVMMTAHLGPAGGPVEPGGFDFQRHAWFLGIGAVGYTRTPVLRLEAGQGG-----QP 208
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
+ + + +++ + A A+ + + + L +A++LAI L
Sbjct: 209 LFRARMALSQHVQSRLPGQTGAFAAAIMTGDRAGLSLVTLEAMRVSNLAHLLAISGLHM- 267
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS----FV 181
L + L + L ++ +++ +G
Sbjct: 268 ---GLLAGFVFAAFRLGFAAVPRLGLRLPA-KKLSAFLALVAGAGYLGLSGGNVATERAF 323
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF--PYSFSPDLLISEKGNLVALVD 236
+V L V + + ++ + I+++ + + LVA+
Sbjct: 324 VMVAVMLGAVILERRAFSLRAVAVAAIIVLVLQPEALLGPGFQMSFAATVGLVAVFG 380
>gi|254454198|ref|ZP_05067635.1| ComEC/Rec2 family protein [Octadecabacter antarcticus 238]
gi|198268604|gb|EDY92874.1| ComEC/Rec2 family protein [Octadecabacter antarcticus 238]
Length = 430
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 65/387 (16%), Positives = 134/387 (34%), Gaps = 49/387 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ A I P PG F +F++ ++ G +
Sbjct: 72 DRRALTLRAVAIAALIVLTLRPEALFGPG-FQMSFAATTALVAVFGVMRQM--------- 121
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ +S I +++ + + F HF+ I GLIAN++++P++
Sbjct: 122 ----DLPRMPRWAKSVGAVIISSL--VAGLATAPFAAFHFNQIAQLGLIANLMSVPLMGT 175
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFVTI 183
+V+PA ++A +L L ++ + M GL I+ +AH ++ P I
Sbjct: 176 LVMPAAVLAAVLAPLGMEMVGLWAMDLGLRWILGVAHFVADQDGALRHVVTPGPEILALI 235
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ + +V + +IR G + I+ + + P LLI+E G+L+ ++ + + +
Sbjct: 236 SLGGIFVVQWRGSIRWAGVAPV---ILAFALWHLAQRPALLIAESGSLIGVMTETGRVVS 292
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ +F W P + +++ FL ++ V
Sbjct: 293 KESVEAFAAESWLENDGAPVAQWVAYERDG--------------------FLEQGRTVSV 332
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
+ V+ C +DI+IT C + L++ G+L
Sbjct: 333 TVAGTRVLNLRGATALAAIEGCGGADIVITNQEMRALAGCE---VYDIVRLRQTGALAGW 389
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWT 390
I +I W
Sbjct: 390 IETGKL------RLISVRDHTGDRIWN 410
>gi|159044353|ref|YP_001533147.1| putative competence protein [Dinoroseobacter shibae DFL 12]
gi|157912113|gb|ABV93546.1| putative competence protein [Dinoroseobacter shibae DFL 12]
Length = 694
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 54/375 (14%), Positives = 124/375 (33%), Gaps = 40/375 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ ++ + + P PG F +F++ + + +
Sbjct: 329 VCFDRRALSLRSVAWAALLVLALRPEAVLGPG-FQMSFAATTALVITYAHLRDVRW---- 383
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
W+ I + + + + A+ + HF+ + YGLIAN+ ++P+
Sbjct: 384 --------WRGIPKWAKGTASLLLS--SAVAGAATAPIAAAHFNIVGHYGLIANLASVPV 433
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+ +V+P L+A+ + L L+ + M G+ I+ +A ++ + R
Sbjct: 434 MGTLVMPGALVALAGVPLGLEGVGLFAMEVGIRWILWVAGTVAGLEGAVGHVVRPMPVVL 493
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
IV+ L++ R G + ++ L + S P+LLIS+ G L+ ++ +
Sbjct: 494 PLIVLGALVVGLLPWRARWAGLAPV---VLALGLWTQSDRPELLISDTGGLLGVMTEQGR 550
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ F W + + ++
Sbjct: 551 ALSKGRGDGFAARNWLENDGDGVTQDVAAARAGIEAGK-------------GTVSVALGP 597
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ V R +C +D+++ R + I L++ G+L
Sbjct: 598 YRVIQLRG------KTGAAQFPEACATADLVVANTRLPRS--TGACESIDAWDLRRTGAL 649
Query: 361 EITIIPPSNDNDKVK 375
+++ + K
Sbjct: 650 AVSVTEDGLQVVRAK 664
Score = 44.0 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 9/196 (4%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI------PKMIYSSE 63
P + LSPP+ P PG FDF ++++G+ A+GY P + +E
Sbjct: 144 PLRPGQVVMTTGHLSPPNAPVEPGGFDFRRHAWFEGLGAVGYTRVPVVLWAEPAQLSFAE 203
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
K +I+ + A + + H + L A++LAI L
Sbjct: 204 RVYETRLKLSKAIRDRIAGQPGAFASAIITGDRAAIDRAHVEDLRGSNL-AHLLAISGLH 262
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++ + L +++L P+ + + + + + F G T I
Sbjct: 263 MGLLTGTVFLGLRSLMAL--WPWLALRVPVKKVAAVCALGAAVVYLFISGMSVATERAFI 320
Query: 184 VVEFLLMVFCKTNIRH 199
+V +L+ C
Sbjct: 321 MVAMILVGVCFDRRAL 336
>gi|254500339|ref|ZP_05112490.1| Competence protein [Labrenzia alexandrii DFL-11]
gi|222436410|gb|EEE43089.1| Competence protein [Labrenzia alexandrii DFL-11]
Length = 801
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 69/377 (18%), Positives = 132/377 (35%), Gaps = 22/377 (5%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS---IPKM 58
+ ++ + L P +PG F +F++ ++ + S ++
Sbjct: 368 IMTGRRGLTLRSVAIAGLFLLLLAPERLFYPG-FQMSFAAVIALVAVYDLWRSHQKRRRI 426
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
S + W + I HF I +GL+ N+L
Sbjct: 427 FIPSANGPFWFLSGALKWATGL-----FVTALVAGIATGIVGAYHFSRIAPFGLVGNMLG 481
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+P+ S +V+P G++A++LM L IP +M+ GL ++I IA +F GR+
Sbjct: 482 MPVFSIIVMPMGVVALVLMPFGLAAIPLKIMSAGLAVLIRIAEFTEQIAPDF--GRMGSL 539
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
+ ++ V + I +G+ I + S PD+ I G +A D
Sbjct: 540 TGLSAAVLLAGFLGLLLAPGRFRMICLGLASIGIALAIISRPPDIYIPATGPQLAARDFE 599
Query: 239 TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIK 298
+ S SF W + +D Q S +
Sbjct: 600 GSLQMSSARSSFSVETWFEREGVSAEAIKSRKMKDDQRSCDPSGCVVRAFA--------- 650
Query: 299 KSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQG 358
VG + + + K +D CQ +D+++T + ++C + + EI + +G
Sbjct: 651 ARGVVGVEHVPIHIALPKTRDAFFYDCQKADMIVTD--MVAPEVCRAAEVFDREIRKARG 708
Query: 359 SLEITIIPPSNDNDKVK 375
++ I + K
Sbjct: 709 AVSIWLEQVCRTGSPTK 725
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 52/251 (20%), Positives = 97/251 (38%), Gaps = 12/251 (4%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI-YSSESHNTWT 69
I+ ARL PP GP PG +DF+F +Y+ GI A G+ Y P+++ + S
Sbjct: 180 IAPGDWIKVRARLFPPMGPVVPGGYDFSFRAYFDGIGASGFSYGAPEIVQGPAPSQVLLL 239
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLI--------KHFHCIPVYGLIANILAIPI 121
+ ++ ++Q I A + + ++ L+ + +A+ILAI
Sbjct: 240 VRHVNGLRQHLAARISALLPEGPETALAVALLVGDRGGIDEKTEESLRAAGLAHILAISG 299
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
L + G A+ L L+L IP + W + + + ++ A G T
Sbjct: 300 LHMALFAGGAYAVCLGTLAL--IPGLALRWPIHKVSAVLALVAAAFYLLLSGASVATQRS 357
Query: 182 TIVVEFLLMVFCKTNIRH-IGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
I++ + + + S+ I ++L F P +S + + +
Sbjct: 358 FIMIALVFLGIMTGRRGLTLRSVAIAGLFLLLLAPERLFYPGFQMSFAAVIALVAVYDLW 417
Query: 241 ISNYSNPPSFI 251
S+ FI
Sbjct: 418 RSHQKRRRIFI 428
>gi|88606770|ref|YP_504918.1| ComEC/Rec2-related protein [Anaplasma phagocytophilum HZ]
gi|88597833|gb|ABD43303.1| ComEC/Rec2-related protein [Anaplasma phagocytophilum HZ]
Length = 705
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 61/389 (15%), Positives = 134/389 (34%), Gaps = 53/389 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ++++ + + + L+ P P F +F++ +S +
Sbjct: 341 IDRRHNSMRSLSVAASVILLATPEAILSPS-FQMSFTAVLSLVS-----------FGNLS 388
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + A + S + + ++I HFH + G++AN++A+P +
Sbjct: 389 CSMVVANNILQYLV------VTATVSLIASLATAPYVIYHFHEFSIAGVLANVIAVPTAT 442
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
FVVIP G++ ++ I ++ W + +I+IAH ++ IP +S + +
Sbjct: 443 FVVIPLGVLYLITCDTFFAPIIAFLLEWAVGFLIYIAHCTALTELFTSFRSIPSSSVLLV 502
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ L C IR G ++ T + + +PD++ + +V D N
Sbjct: 503 TLGLLTASLCTGCIRLFGGVI--FTFLGTVSAITYKTPDIICDDTAVVVKGRDANLYFVM 560
Query: 244 Y-SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ F ++QW + +D + C
Sbjct: 561 QNGSTRGFKYAQWARDNGQGRIKQQGEFLQDKMLVCEEG-------------------GC 601
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+ V + + C+ +++I + + C+ I + ++ G I
Sbjct: 602 IYKD----HVLITSDSSFLVAHCKNMNLIICNEQTTYPEECSDIKHIGLQDIRDHGVHYI 657
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ S +K PW K
Sbjct: 658 WMNKSSVYVEKSITR---------RPWHK 677
Score = 44.8 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 6/137 (4%)
Query: 2 LSITKKYDPF-PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
L++ DP I+ + PP P +DF +Y+KGI A G+ S +
Sbjct: 145 LAVRTVIDPIIQVGDIIKFTGVIYPPKAPNSHNGYDFARDAYFKGIGATGFTTSAVVLQE 204
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-----GLIAN 115
ES W + S IK R + T SA + + + +A+
Sbjct: 205 KGESIRFLDWIERSRIKTYERFAARLSRDTTEVLSALLIGKRQGIREEILKDVRRSGLAH 264
Query: 116 ILAIPILSFVVIPAGLI 132
+LAI L + +
Sbjct: 265 LLAISGLHLSCVAGMVF 281
>gi|302383255|ref|YP_003819078.1| ComEC/Rec2-related protein [Brevundimonas subvibrioides ATCC 15264]
gi|302193883|gb|ADL01455.1| ComEC/Rec2-related protein [Brevundimonas subvibrioides ATCC 15264]
Length = 726
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 52/392 (13%), Positives = 121/392 (30%), Gaps = 40/392 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ + + P PG F +F++ ++ + + +
Sbjct: 357 ILLDRQAISMHGLAVAAMVVLILQPEAIVTPG-FQMSFAATAALVALTEAWPPRTRELSV 415
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + F I+HF+ V+GLIAN+ PI
Sbjct: 416 PWPIALFQSARH-------WLVVAVTASLVAGVATGPFAIQHFNRTAVFGLIANLATSPI 468
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSF 180
F+++PA + LL + L V G+D ++ + H +S I P+
Sbjct: 469 ADFIMMPALALGALLEPIGLGGPFLWVAGRGVDAMLAVGHWVSGLPGAVQTIASAPDYVL 528
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ L + + +R G + + +P + +P + I + G A
Sbjct: 529 PISFLGVLFVCLWQGRLRWAGLPF----VCAVLIWPRAPTPTVWIGDGGTNAAFSRSGQA 584
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ F W + + ++ C S
Sbjct: 585 VVIRPGVREFATDLWSRRRGL------------------TLSERAEEGWLCERYSCAPVS 626
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKLCNVSLLITPEILQKQGS 359
+ + + + C+ + ++ + + C+ L++ + G+
Sbjct: 627 G--TAPVAVWWGTTAPDPEALTVLCESAPLVSVRATVSALPEACDGRLVLDGVDHARGGA 684
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+E+ P + SA PW++
Sbjct: 685 VELWRTPQGWRA------VWSADVRGDRPWSR 710
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 10/225 (4%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L T + DP + I A ++PP PA PG +DF ++++ + + + +
Sbjct: 161 LRATVRGDPPVPGSAIRLFAIVNPPPPPASPGAYDFGRGAWFERLGGTAFALAETRSTIL 220
Query: 62 SESHNTWTW-KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------I 113
+ + ++++I+ I +G A+ H I L +
Sbjct: 221 PTAPWSLRMAMRVNAIRFGLAQRIVHRLGERTGGIAAAMTTGHETWIQRDDLDAMRDSGL 280
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
A+IL+I L ++ G A L+ + P+ + + +A ++V G
Sbjct: 281 AHILSISGLHMAIV--GGFAFFLVRFGVAAWPWLALRVSGKKVAAVAGVVAVWSYLILSG 338
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
I + +++L P +
Sbjct: 339 APAPAERAAITASIAFAAILLDRQAISMHGLAVAAMVVLILQPEA 383
>gi|254510419|ref|ZP_05122486.1| competence protein [Rhodobacteraceae bacterium KLH11]
gi|221534130|gb|EEE37118.1| competence protein [Rhodobacteraceae bacterium KLH11]
Length = 671
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 60/380 (15%), Positives = 126/380 (33%), Gaps = 44/380 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A I P PG F +F++ ++A G ++
Sbjct: 334 VLLDRRAISLRAVAVAALIVLALRPETLLSPG-FQMSFAATTALVAAFGGLREYGRLPGP 392
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + HF+ + YGL+AN+L++P+
Sbjct: 393 KWLRPVLAL---------------VMSSAIAGIATAPIGAAHFNTMSHYGLVANLLSVPV 437
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-RIPETSF 180
+ VV+PA ++A LL ++ I VM GL I+ +A +S P+
Sbjct: 438 MGTVVVPAAVVAALLAPFGVEWIALYVMGAGLRWILAVAQWVSGLEGARGYVTSPPDFVL 497
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ L ++ + R +G + + + P+ LI+E G LV ++ +
Sbjct: 498 PVLAAALLWLILWQGRARWLGVGP---ALFAVAMWGQGHRPEALIAETGGLVGVMTEQGR 554
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ F+ + W ++ + + ++FL K
Sbjct: 555 AVSKPKGSGFVATVWLENDGDSTTQSNAATRWPD------------AGGEIQRFLLGDKE 602
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+I KR C+ I++ + + + P+ L++ GSL
Sbjct: 603 ---------IIHVTGKRAARGYDECRQDQIVVAPVSLTLS---GPCRVYDPDALRETGSL 650
Query: 361 EITIIPPSNDNDKVKFIIKS 380
++ + + S
Sbjct: 651 ALSKGHLFTSTELSGQRLWS 670
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 87/246 (35%), Gaps = 16/246 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ A LSPP GP PG FDF ++++ + A+G Y+ ++ + + ++
Sbjct: 153 GQRVMTTAHLSPPQGPVEPGGFDFRRHAWFQQLGAVG--YTRVPVLTIAPAQAGRDGVRV 210
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVV 126
++ + + + +RA + A+ + L +A++LAI L +
Sbjct: 211 TAWRMAISDHVRAILPGEAGGFAAAVTTGDRSGMGQASLEMLRASNLAHLLAISGLHMGL 270
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLD----IIIHIAHRISVAHNEFCIGRIPETSFVT 182
+ + + L +P + + + +A I + + + V
Sbjct: 271 LTGFVFVACR--IGLSTVPPIALRLPVRKLAALAALMAATIYLFLSGGNVATERAFVMVC 328
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+++ +L+ ++R + I + + S + + LVA
Sbjct: 329 VMLGAVLLDRRAISLRAVAVA-ALIVLALRPETLLSPGFQMSFAATTALVAAFGGLREYG 387
Query: 243 NYSNPP 248
P
Sbjct: 388 RLPGPK 393
>gi|254487263|ref|ZP_05100468.1| competence protein, putative [Roseobacter sp. GAI101]
gi|214044132|gb|EEB84770.1| competence protein, putative [Roseobacter sp. GAI101]
Length = 680
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 59/390 (15%), Positives = 128/390 (32%), Gaps = 55/390 (14%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + +K A I + P PG F +F++ ++ G+ ++
Sbjct: 337 LMLGRKALSIRAVAIAATIVLVLRPEALMGPG-FQMSFAATTALVAVFGWLRNV------ 389
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ T+ K ++ + +F++ + HF+ I YGL+AN+ ++P+
Sbjct: 390 ---NLTFGQKWLAPVVSTFIS------SAIAGLFTAPVGAAHFNTIAHYGLVANLASVPL 440
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSF 180
+ +V+PA + A++L D VM GL I+ +A ++ + P
Sbjct: 441 MGVMVMPAAVAALVLSPFGFDPAALWVMGLGLRWILGVAAFVADIKGAQGFVKGPGPWVL 500
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ FL ++ + +R G G + + + P +LI++ G +V ++
Sbjct: 501 PLLASGFLWLLLWQGWLRLAGL---GAVLAGFVLWHGATRPAVLIADTGGIVGVITPQGR 557
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ FI W + +
Sbjct: 558 ALSKPKGAGFIALNWLENDGDGADQPAAAARWGD-------------------------- 591
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ ++I KR C I++ ++ L P L+ G++
Sbjct: 592 -RMALAGQEIIHLSGKRAVAAFGGCHSGQIVVASVEVEGD--IGECTLFDPISLRTTGAV 648
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
++ + + + WT
Sbjct: 649 SLSEVDGRIKTRTARQM------AGARLWT 672
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/233 (18%), Positives = 86/233 (36%), Gaps = 14/233 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ LSPPSG PG FDF +++ + A+G Y+ ++ +E+ + +
Sbjct: 156 GLRVMTTGHLSPPSGAVEPGGFDFQRHAWFARLGAVG--YTRTPLLGVAEASDGHAGLAV 213
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVV 126
++ + I+ + AS I L +A++LAI L +
Sbjct: 214 FRLRMAASAHIQGTLPGDIGGFASAITTGDRSAISQMALYNLRASNLAHLLAISGLHMGL 273
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFVTIVV 185
+ A + L ++L L +P+ + W I A ++ + G + +V
Sbjct: 274 LCAVVFGALRVLLCL--VPWVALRWPTRSIAAAGALIVASGYLALSGGNVATERAFIMVS 331
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTF--PYSFSPDLLISEKGNLVALVD 236
L + I ++ I TI+++ + + LVA+
Sbjct: 332 VALGALMLGRKALSIRAVAIAATIVLVLRPEALMGPGFQMSFAATTALVAVFG 384
>gi|144897811|emb|CAM74675.1| ComEC/Rec2-related protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 696
Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 55/393 (13%), Positives = 133/393 (33%), Gaps = 42/393 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + + + P P +F + ++A+ Y + +
Sbjct: 321 VLLDRSALSMRLVAWAAVLVLVVSPEALTGP-----SFQMSFAAVAALIATYEVVAKPMA 375
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + + + + +S +++ HF+ V+ ++AN+LA+PI
Sbjct: 376 GWSVTHSRPH--HRLLLYLAGVVLSTL--VAGSSTALYGAYHFNRFAVWSVLANLLAVPI 431
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSF 180
V+P ++++LLM L L+++ M W + ++ +A ++ + +
Sbjct: 432 TGVAVMPFAMLSLLLMPLGLEHLALVPMGWAVTVVNMVAAWVAALPGAAITLPPLAPWGM 491
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ L ++ + + R G + + + F PDLL+ +G L ++
Sbjct: 492 ACFTLGGLWLLIWRGSWRLWGLAPMVLGLSGFFLA---HPPDLLVDGRGYAFGLRMEDGS 548
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ S I W E C
Sbjct: 549 LLV-SRGGRIIKESWDRRAGPLSIE----------------RWPKQGRSHDGTLSCDP-L 590
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
C+ R ++V +++ + I +C + ++++ + + L+I L ++G+
Sbjct: 591 GCIWR-RDGMVVALIQNEAGIAAACASAQVVVSAVPVRDAC-RGPRLVIDRIDLWRRGAH 648
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ + + A PW+ HR
Sbjct: 649 ALWLEDLK--------TLSVAKWQGKRPWS-HR 672
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 15/229 (6%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ +P P I A L PPS P PG FDF +++ G+ A+G S +++
Sbjct: 135 KQAEPVPVGAEIRLWANLMPPSQPVAPGAFDFARHAWFLGLGAVGSGLSEVEILTPPGQG 194
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILA 118
++ ++ + I A+ + IP + +A++L+
Sbjct: 195 Y-----WLNRLRHQVTLRVTEAIPGAAGGVAAALITGETAGIPRQVMDQYRDSGLAHLLS 249
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIGRIPE 177
I L ++ IL L +P + + +A ++ + +P
Sbjct: 250 ISGLHMSLLAGMAFFILRG--GLALVPRVALNHPIKKWAALVAMILTFLYMLLAGAPVPA 307
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ LL V + + + ++++ + P +S
Sbjct: 308 QRAFLMTGIVLLAVLLDRSALSMRLVAWAAVLVLVVSPEALTGPSFQMS 356
>gi|126461477|ref|YP_001042591.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17029]
gi|126103141|gb|ABN75819.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17029]
Length = 684
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 60/389 (15%), Positives = 119/389 (30%), Gaps = 47/389 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + I L P G F + +A+ + ++ + +S
Sbjct: 341 DRRALSMRSFALSATIILLWQPETLLEAG-----FQMSFAATAALIWGFNALRERVHPKS 395
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ W + G S F HF+ I VYGL+ N++A+P++
Sbjct: 396 LSRWVAPFF----------MLVVASLIGGLSTGPFAAAHFNRIAVYGLLGNLMAVPVMEL 445
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVTI 183
+V+PA +A LL L P VM G I+ +AH ++ + +
Sbjct: 446 LVMPAAAVAALLAPLGTAGPPLWVMEQGARWILWVAHWVAALPGAVRAVVSPGPWVLPLL 505
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ L ++ + R G + + + + P L ++ G LV L+ +
Sbjct: 506 ALGALWLMLWRGRARLAGLGGMATAFL---LWSAAERPPLFVAADGALVGLMGPEGRALS 562
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ F W +A + + ++ +
Sbjct: 563 DARGGGFAARSWLENDGDLADQAAAAARPGFEGPREARRFQ------------------- 603
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
V++ D + +C + ++I LLI L + G+L I
Sbjct: 604 LNGLPGVVLKGKGAADHLPEACASARLVILAAPYEGPAP-GACLLIDRTSLARTGALAIR 662
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ H W+
Sbjct: 663 EEAGDLRLQPARI--------GHRLWSGR 683
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 80/207 (38%), Gaps = 8/207 (3%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
T+ L PP PA PG FDF +Y+ + A+GY + ++ + + ++ +
Sbjct: 159 GMTVALTGHLDPPLPPAEPGGFDFRRMAYFDRLGAVGYTRTPVVLLEPAHARDSPVNRLR 218
Query: 74 SSIKQSFLNEIRANIGTYGSASA----SIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++I++ G + +A + + GL A+ILAI L+ ++
Sbjct: 219 TAIREGVQARFPGEAGAFTAAVLTGDEAGISAATMENLRRSGL-AHILAISGLNMSLLAG 277
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFL 188
+ ++ L +P + I +A + + G +P ++ L
Sbjct: 278 FVFGLVRH--GLALVPPLALRLPTKKIAAVAAFLGTGFYLLMSGGNVPALRSFVMIAVML 335
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTF 215
+ V + S + TII+L+
Sbjct: 336 VAVLADRRALSMRSFALSATIILLWQP 362
>gi|209964502|ref|YP_002297417.1| ComEC [Rhodospirillum centenum SW]
gi|209957968|gb|ACI98604.1| ComEC [Rhodospirillum centenum SW]
Length = 726
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 62/388 (15%), Positives = 126/388 (32%), Gaps = 41/388 (10%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P P F +F + +SA + +
Sbjct: 378 DRSPFSLRVVAFAATVVLLWQPEALLGPS-FQMSFGAVIALVSAYE---------AAGPT 427
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W + + A + + F + HF YGL+AN+LA+P+ SF
Sbjct: 428 LRDWHAQAGPVRRGLLYVGGLALTSLVAGTATTPFGLYHFQQGANYGLLANLLAVPVTSF 487
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-RIPETSFVTI 183
V+P GL+ LM L+ M G+ I+ AH ++ P + +
Sbjct: 488 WVMPWGLVVYGLMPFGLEGWAVDAMGLGVQAILWTAHAVAGLPGAVLHVPAAPPAALLLF 547
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LIS 242
+ L + + + R + + + + + PDL ++ G LV + + L+
Sbjct: 548 GIGGLWLALWRRSWR---LLGLLPMGLGVALAATAAPPDLRVTSSGKLVGVRAADGSLLV 604
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ F W + + + C C
Sbjct: 605 STGRAARFEAEVWWRRDG----------------GTDAPPRWPKAGTADGRLTCDP-LVC 647
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+ V ++ + + + +C +D++IT +R + C+ +I L+++G+ +
Sbjct: 648 RYRL-NGVTAAIVMKPEGLDPACTGADLVITRLRAL---GCDGPRVIDSGALRERGAHAV 703
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWT 390
I + L PW+
Sbjct: 704 FIGADGRIVIR-----TGRPHPLARPWS 726
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 78/234 (33%), Gaps = 11/234 (4%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-IPKMIY 60
+ + K PA T I +A L PP PG +DF +Y+ + A+G+ S M
Sbjct: 179 VRLKKGDVAPPAGTRIGLLAVLRPPPDMPEPGAYDFRRHAYFLRLGAVGFALSAAEPMPA 238
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLI 113
+ ++Q + A + A A+ L IP +
Sbjct: 239 PPPEGWAAAQAWLERLRQGIAERVEARLDGATGAVATALLNGEPTAIPESDLEAMRVSGL 298
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
++L+I L ++ + L +L+L + + +A +G
Sbjct: 299 QHLLSISGLHIGLVAGLVFFTLRALLALVEPL--ALRRPIKKWAAVAALAGALGYTVLVG 356
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRH-IGSIMIGITIIILFTFPYSFSPDLLIS 226
T ++ +L+ + + T+++L+ P +S
Sbjct: 357 APVPTVRSALMTGLMLLAVLADRSPFSLRVVAFAATVVLLWQPEALLGPSFQMS 410
>gi|77462543|ref|YP_352047.1| putative competence protein [Rhodobacter sphaeroides 2.4.1]
gi|77386961|gb|ABA78146.1| Putative Competence protein [Rhodobacter sphaeroides 2.4.1]
Length = 684
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 60/389 (15%), Positives = 119/389 (30%), Gaps = 47/389 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + I L P G F + +A+ + ++ + +S
Sbjct: 341 DRRALSMRSFALSAIIILLWQPETLLEAG-----FQMSFAATAALIWGFNALRERVHPKS 395
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ W + G S F HF+ I VYGL+ N++A+P++
Sbjct: 396 LSRWVAPFF----------MLVVASLIGGLSTGPFAAAHFNRIAVYGLLGNLMAVPVMEL 445
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVTI 183
+V+PA +A LL L P VM G I+ +AH ++ +
Sbjct: 446 LVMPAAAVAALLAPLGAAGPPLWVMEQGARWILWVAHWVAALPGAVRAVVSPGPWVLPLF 505
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ L ++ + R G + + + + + P L ++ G LV L+ +
Sbjct: 506 ALGSLWLMLWRGRARLAGLAGMAMAFL---LWSAAERPPLFVAADGALVGLMGPEGRALS 562
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ F W +A + + ++ +
Sbjct: 563 DARGGGFAARSWLENDGDLADQAAAAARPGFEGPREARRFQ------------------- 603
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
V++ D + +C + ++I LLI L + G+L I
Sbjct: 604 LNGLPGVVLKGKGAADHLPEACASARLVILAAPYEGPAP-GACLLIDRTSLARTGALAIR 662
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ H W+
Sbjct: 663 EEAGDLRLQPARI--------GHRLWSGR 683
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 8/207 (3%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
T+ L PP PA PG FDF +Y+ + A+GY + ++ + + ++ +
Sbjct: 159 GMTVALTGHLDPPLPPAEPGGFDFRRMAYFDRLGAVGYTRTPVVLLEPAHAGDSPVNRLR 218
Query: 74 SSIKQSFLNEIRANIGTYGSASA----SIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++I++ G + +A + + GL A+ILAI L+ ++
Sbjct: 219 TAIREGVQARFPGEAGAFTAAVLTGDEAGISAATMEDLRRSGL-AHILAISGLNMSLLAG 277
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFL 188
+ ++ L +P + I +A + + G +P ++ L
Sbjct: 278 FVFGLVRH--GLALVPPLALRLPTKKIAAVAAFLGTGFYLLMSGGNVPALRSFVMIAVML 335
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTF 215
+ V + S + II+L+
Sbjct: 336 VAVLADRRALSMRSFALSAIIILLWQP 362
>gi|89054334|ref|YP_509785.1| ComEC/Rec2-related protein [Jannaschia sp. CCS1]
gi|88863883|gb|ABD54760.1| ComEC/Rec2-related protein [Jannaschia sp. CCS1]
Length = 706
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 71/416 (17%), Positives = 134/416 (32%), Gaps = 71/416 (17%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ + I L P PG F +F++ ++A +
Sbjct: 333 LDRRAITLRSVAIAAIIVLLHRPETLMSPG-FQMSFAATTALVAAF-----------TGL 380
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
W +K + A+ + F HF+ + VYGLIAN+L +P +
Sbjct: 381 QGAEWMRNWPKWVKGA---WALLTSSVIAGAATAPFAAAHFNRLAVYGLIANLLTVPAMG 437
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSFVT 182
VVIP ++A++L L + F +M L+ I+ +A R++ + P
Sbjct: 438 SVVIPFAVLALMLAPFGLSWVAFWIMELALEWILAVAARVADIPGAVRMVASPPHLVLPL 497
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
I V + + R I + +I + ++ P LLISE G LV L
Sbjct: 498 IGVGGIALCIWSGRGRWIALTPMAAGLI---LWQWAERPMLLISEPGGLVGLTTDQGRAL 554
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ F+ W + ED + + + R+ Q + +
Sbjct: 555 SRPRGDGFVAGIWLENDGDLITQ------EDAAARPAWADADPGRTTQLGEVTLWHGTGR 608
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLC------------------- 343
++ +C DI++T + +
Sbjct: 609 AA-------------SRVVDAACARHDIVVTNLAPEDPSATLTQAERDTRARLTAPPPAT 655
Query: 344 --------NVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
LL+TP +L GS+ ++ + D + W++
Sbjct: 656 GAANAATATPCLLLTPRVLSATGSIALSAQDGALQIDTAR------AHQGTRLWSR 705
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 88/265 (33%), Gaps = 22/265 (8%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + I LSPP G A PG FDF ++++ I +GY + ++
Sbjct: 143 DQGFMDPQPGAIIFTTGHLSPPGGAAEPGGFDFQRHAWFQSIGGVGYTRTPVLLLEPPAD 202
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANIL 117
+ +++ ++A I A A+ L + IA++L
Sbjct: 203 GVA----PLFTLRMRMSAAVQAQIPGQPGAFAAAVLTGDRSGLSQGSTQDMRDSNIAHLL 258
Query: 118 AIPILSFVVIPAGLIAIL---LMILSLDNIPFGVMAW-GLDIIIHIAHRISVAHNEFCIG 173
AI L ++ + A L L ++ + + + W + ++ A ++++
Sbjct: 259 AISGLHMGLLTGFVYAALRTALALIPAIALRYPIRKWAAVAALVSGAFYLALSGGNVATE 318
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF--PYSFSPDLLISEKGNL 231
R V V + S+ I I++L S + + L
Sbjct: 319 RAFIQVAVMFTA-----VLLDRRAITLRSVAIAAIIVLLHRPETLMSPGFQMSFAATTAL 373
Query: 232 VALVDKNTLISNYSNPPSFIFSQWK 256
VA N P ++ W
Sbjct: 374 VAAFTGLQGAEWMRNWPKWVKGAWA 398
>gi|87200046|ref|YP_497303.1| ComEC/Rec2-related protein [Novosphingobium aromaticivorans DSM
12444]
gi|87135727|gb|ABD26469.1| ComEC/Rec2-related protein [Novosphingobium aromaticivorans DSM
12444]
Length = 760
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 65/387 (16%), Positives = 131/387 (33%), Gaps = 34/387 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ + L P P +F + + AI F+S +
Sbjct: 372 RDPLSLRMVAVGALVVMLFWPEAVFGP-----SFQMSFAAVIAIVAFHSAAPVRGFLAGE 426
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++ + G + + HFH VYG +AN++AIP+ +FV
Sbjct: 427 RHGGLARLAR-----NVLLLLATGLVIELALMPIGLFHFHRAGVYGSLANVIAIPLTTFV 481
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSFVTIV 184
+P IA+LL + L + ++ LD+++ +AH ++ + + S++ V
Sbjct: 482 TMPLIGIALLLDLAGLGGPAWWLVETSLDLLLALAHFVADRPGAVTMLPPGDRWSYLVFV 541
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN-TLISN 243
L + +R G + + + P +PD+L++ G VA+ + L+
Sbjct: 542 AGMLWLALWTGRVRLWGLLPAFAAALSMALTP---TPDILVTGDGRHVAIAGEGAELLVL 598
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ FI P + + ++R + L + V
Sbjct: 599 RAGRGDFIRENLLELAGMEGETRPLDEWRGARCGEDFCAASLMRGGRHFAILMARSRNDV 658
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
+ I +C+ SDI+I R +T L L G L I
Sbjct: 659 -------------DEMDIAAACERSDIVIADRRLPHTC-RPKLLKADRAFLAMTGGLSID 704
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ + + + ++ + W+
Sbjct: 705 LSR-----RRTRTVAETQGRQGWYRWS 726
>gi|332557428|ref|ZP_08411750.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides WS8N]
gi|332275140|gb|EGJ20455.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides WS8N]
Length = 684
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 61/389 (15%), Positives = 121/389 (31%), Gaps = 47/389 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + I L P G F + +A+ + ++ + +S
Sbjct: 341 DRRALSMRSFALSAIIILLWQPETLLEAG-----FQMSFAATAALIWGFNALRERVHPKS 395
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ W + G S F HF+ I VYGL+ N++A+P++
Sbjct: 396 LSRWVAPFF----------MLVVASLIGGLSTGPFAAAHFNRIAVYGLLGNLMAVPVMEL 445
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVTI 183
+V+PA +A LL L P VM G I+ +AH ++ + +
Sbjct: 446 LVMPAAAVAALLAPLGAAGPPLWVMNRGARWILWVAHWVAALPGAVRAVVSPGPWVLPLL 505
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ L ++ + R G + + + + + P LL++ G LV L+ +
Sbjct: 506 ALGALWLMLWRGRARLAGLGGMAMAFL---LWSAAERPPLLVAADGALVGLMGPEGRALS 562
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ F W +A + + ++ +
Sbjct: 563 DARGGGFAARSWLENDGDLADQAAAAARPGFEGPREARRFQ------------------- 603
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
V++ D + +C + ++I LLI L + G+L I
Sbjct: 604 LNGLPGVVLKGKGAADHLPEACASARLVILAAPYEGPAP-GACLLIDRTSLARTGALAIR 662
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ H W+
Sbjct: 663 EEAGDLRLQPARI--------GHRLWSGR 683
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 8/207 (3%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
T+ L PP PA PG FDF +Y+ + A+GY + ++ + + ++ +
Sbjct: 159 GMTVALTGHLDPPLPPAEPGGFDFRRMAYFDRLGAVGYTRTPVVLLEPAHARDSPVNRLR 218
Query: 74 SSIKQSFLNEIRANIGTYGSASA----SIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++I++ + G + +A + + GL A+ILAI L+ ++
Sbjct: 219 TAIREGVQARFPSEAGAFTAAVLTGDEAGISAATMEDLRRSGL-AHILAISGLNMSLLAG 277
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFL 188
+ ++ L +P + I +A + + G +P ++ L
Sbjct: 278 FVFGLVRH--GLALVPPLALRLPTKKIAAVAAFLGTGFYLLMSGGNVPALRSFVMIAVML 335
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTF 215
V + S + II+L+
Sbjct: 336 AAVLADRRALSMRSFALSAIIILLWQP 362
>gi|148556117|ref|YP_001263699.1| ComEC/Rec2-like protein [Sphingomonas wittichii RW1]
gi|148501307|gb|ABQ69561.1| ComEC/Rec2-related protein [Sphingomonas wittichii RW1]
Length = 714
Score = 169 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 67/395 (16%), Positives = 138/395 (34%), Gaps = 37/395 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+++ ++ T + L P A P +F + ++A+ P++
Sbjct: 355 IAMGREALTLRLVATGALVVLLFWPEALAGP-----SFQLSFAAVTALVATLDHPRVAAF 409
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + G + + + HFH YG +AN++AIP+
Sbjct: 410 AARRDEGMAARFGR-----GLAVLLLSGLVIEVALAPIALFHFHKSGFYGALANMVAIPL 464
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+FV++P +A+LL I + + +++ L +++ IA ++ A + + +F
Sbjct: 465 TTFVIMPLEALALLLDIAGIGAPAWWLVSQALALLLWIARTVAAAPGAVAMLPTMAWGAF 524
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ L + +T R G + + + P +PDLL++ G VA V +
Sbjct: 525 ALMAAGGLWLALWRTRARRWGLLPVAAGALWALLSP---TPDLLVTGDGRHVAFVLGDGR 581
Query: 241 -ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+I A P + + +I R + + L +
Sbjct: 582 VALLRDRAGDYIRGVLGEAAGVDAEALPVDALMQARCSADLCITDIQRGGRRWRILATRS 641
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ + R + +C +DI I+ R L I +L + G
Sbjct: 642 PYRLDWTR-------------LSRACAAADIAISERRLPRGC-TPRWLKIDRPLLARTGG 687
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
L I + + D A PW+ R+
Sbjct: 688 LAIDLDRGAVD--------SVAAAVGRHPWSTFRM 714
>gi|329114370|ref|ZP_08243132.1| ComE operon protein 3 [Acetobacter pomorum DM001]
gi|326696446|gb|EGE48125.1| ComE operon protein 3 [Acetobacter pomorum DM001]
Length = 748
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 49/378 (12%), Positives = 115/378 (30%), Gaps = 29/378 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ + F + ++ ++ +S +
Sbjct: 380 GLAVAACVLVLWMPQVVMGVAFQMSMAAVMALVAGYEVLQPKLTCWRASTTGLGHWLAW- 438
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ + A + + HF I + ++AN++A+P+++ ++P GLIA
Sbjct: 439 -------HSVVLALTSVLVGCATLPVAMAHFGVIQPFFVVANMVAVPLMAVWIMPLGLIA 491
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVF 192
+ M L +D + +M G+ II +AH ++ + +P + +++ +
Sbjct: 492 LAFMPLHMDVLFLWLMGVGIRPIIWLAHMVAHWPAARVVVPHMPGWGLLAVMLGLCWICL 551
Query: 193 CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN-YSNPPSFI 251
+ R G ++ + + PD++IS G LV + + + + S +
Sbjct: 552 WRQRWRWAG---CAGLVLGMVSPWLLVQPDVIISPDGGLVGVRESDKIYVMGQSRAARPV 608
Query: 252 FSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVI 311
W P P + + E +
Sbjct: 609 MQAWGQYFAQPVGIFPPEGETPD--GALTCGAENTPDTCVALLHGQDVVVRRQDASDGRL 666
Query: 312 VGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDN 371
+ C +D++I+ + L N + + + G+ I + N
Sbjct: 667 LL-------PIDICTGADVVISVAPLRASCL-NAPIRLDRFSAWENGAEAIFLHKSGNVV 718
Query: 372 DKVKFIIKSAIENLHFPW 389
+ PW
Sbjct: 719 RTDRAW------RGQRPW 730
Score = 40.2 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 78/236 (33%), Gaps = 14/236 (5%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ L PP P PG D F +++ + G +++ ++ H
Sbjct: 182 PAALRVGDHLRVKVLLQPPPFPVLPGARDRQFEAWFANQAGSGRALGFVQLVVLAQGHK- 240
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIP 120
++++ I + + A+ L+ + +A++LA+
Sbjct: 241 -LQLWFENLRERINARIHTILPGPEGSVAATVLVGASETVEKQLREDFAASGLAHLLAVA 299
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPETS 179
L ++ ++A ++ L + + W + + + + +P
Sbjct: 300 GLHLGIVMGLVMAASRLL--LATTEYTALRWPCKALAAFCAWGVGLVYVLLTGAHLPAQR 357
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF--PYSFSPDLLISEKGNLVA 233
+ + +L V + + + + +++L+ + + ++ LVA
Sbjct: 358 SLLMAAVAVLGVAAGRRVVSMRGLAVAACVLVLWMPQVVMGVAFQMSMAAVMALVA 413
>gi|58698439|ref|ZP_00373348.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58535031|gb|EAL59121.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 729
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 63/332 (18%), Positives = 119/332 (35%), Gaps = 44/332 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +KY A + + P PG F +FS+ +++
Sbjct: 411 IMIERKYRGLIAIAFAAAVILIIEPEAILKPG-FQMSFSAVLALVASYQI---------- 459
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
K+ IK S + + I +F+ + G+I N++AIPI
Sbjct: 460 -------NANKLFKIKIMKYFVSIMISSVIASLATVPYTIYNFNYFSISGIITNLVAIPI 512
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSF 180
++ ++IP G+I +LL+ L ++ I + ++ I++I + I+ R P +S
Sbjct: 513 VTLIIIPLGIIYVLLIPLGIEWIIAPFIERPINSILYITNAIASLQYLVIPIRTFPASSI 572
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I L + + N R +G I + I + +PD+LI+ N+ A N L
Sbjct: 573 IIITFGLLWLCLWERNWRFLGFFFIVLGICFSAAY---KTPDILINAD-NVAAKESDNLL 628
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
S +F+ W + K
Sbjct: 629 YSLTRKSRNFVIKTWAKQNGQNQILNHTKYSNPDKRL---------------------KY 667
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
C+ ++ V + +K+ I +C D+ I
Sbjct: 668 GCIYNKGNNKSVLLAYKKEDISENCDKVDLTI 699
>gi|258541858|ref|YP_003187291.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-01]
gi|256632936|dbj|BAH98911.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-01]
gi|256635993|dbj|BAI01962.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-03]
gi|256639048|dbj|BAI05010.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-07]
gi|256642102|dbj|BAI08057.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-22]
gi|256645157|dbj|BAI11105.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-26]
gi|256648212|dbj|BAI14153.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-32]
gi|256651265|dbj|BAI17199.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256654256|dbj|BAI20183.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-12]
Length = 732
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/390 (13%), Positives = 119/390 (30%), Gaps = 30/390 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
++ ++ + L P F + ++ ++ +
Sbjct: 353 IAAGRRVVSMRGLAMAACVLVLCMPQ-VVMGVAFQMSMAAVMALVAGYEVLQPKLTRWRA 411
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + + A + + HF I + ++AN++A+P+
Sbjct: 412 STTGFGHWLAW--------HGAVLALTSVLAGCATLPVAMAHFGVIQPFFVVANMVAVPL 463
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSF 180
++ ++P GL+A+ M L +D +M G+ +I +AH ++ + +P
Sbjct: 464 MAVWIMPLGLLAVGFMPLHMDAPFLWLMGAGIRPVIWLAHIVAHWPAARVAVPHMPGWGL 523
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ +++ + + + R +G ++ + + PD++IS G LV + D +
Sbjct: 524 LAVMLGLNWICLWRQHWRWVG---CAGLVLGMASPWLLVQPDVVISPDGGLVGVRDSGKV 580
Query: 241 ISN-YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
S I W P P + + E
Sbjct: 581 YVIGQSRAQRPIMQAWGQYFAQPVEVFPPEGETPG--GALTCGAEDTPDTCVALLRGQDV 638
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ C +D++I+T + NV + + + G+
Sbjct: 639 VVRRQDTSDGRELL-------PADICAGADVVISTAPLRASCP-NVPIRLDRFSAWENGA 690
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + N + PW
Sbjct: 691 EAVFVHQSKNVVRTDRAW------RGQRPW 714
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 82/262 (31%), Gaps = 13/262 (4%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + A L PP PA PG D F +++ + G +++ ++ +
Sbjct: 165 PLQVGDQLRVKALLQPPPFPALPGARDRQFEAWFANQAGSGRALGHVQLVTMGQTGHGHK 224
Query: 70 WK-KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPI 121
+ ++++ I + A+ L+ + +A++LA+
Sbjct: 225 LQLWFENLRERINTRIHTILPGSKGGVAATVLVGASETVEKQVREDFAASGLAHLLAVAG 284
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR--IPETS 179
L ++ ++A ++ L + + W + + G + S
Sbjct: 285 LHLGIVMGLVMAASRLL--LAATEYTALRWSCKALAALCAWSVGLVYVLLTGAHLPAQRS 342
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIG-ITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
V L + + + G M + ++ + + + ++ LVA +
Sbjct: 343 LFMAAVAVLGIAAGRRVVSMRGLAMAACVLVLCMPQVVMGVAFQMSMAAVMALVAGYEVL 402
Query: 239 TLISNYSNPPSFIFSQWKSALI 260
+ F W +
Sbjct: 403 QPKLTRWRASTTGFGHWLAWHG 424
>gi|85708727|ref|ZP_01039793.1| predicted membrane metal-binding protein [Erythrobacter sp. NAP1]
gi|85690261|gb|EAQ30264.1| predicted membrane metal-binding protein [Erythrobacter sp. NAP1]
Length = 761
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 60/395 (15%), Positives = 135/395 (34%), Gaps = 42/395 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF-YSIPKMIY 60
L++ ++ L P P +F + + AI S P +
Sbjct: 397 LALGREALSLRMVAAAAVFVLLLWPESVIGP-----SFQMSFAAVLAIVALHSSSPVKAF 451
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ +W+ + + + G + ++ HFH VYG AN+LAIP
Sbjct: 452 LAPREESWSSRAGRRV------LMLFFTGLVIEIALMPIVLFHFHRAGVYGAFANVLAIP 505
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETS 179
+++F+ +P A+ ++ L + ++ L++++ IAH + + ++ +
Sbjct: 506 LVTFISMPLIAFALAFDLVGLGAPFWWLVERSLNLLLSIAHITASQPGAVKLMPQMSGAT 565
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN- 238
V L + R +G + + +L P PD+LI +G V + +N
Sbjct: 566 IALFVGGGLWLALWSGKARLLGFVPAALATTLLMATPI---PDVLIGREGRHVGITIENE 622
Query: 239 ----TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
+L+S + S+ P E + + + R
Sbjct: 623 DGSRSLLSLRDSRSSYSRDNLLELASVQSEPIPLADWEGARCSTEFCTINLERG------ 676
Query: 295 LCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEIL 354
+ + + R+ ++ + + +C+ +DI++ + L +L
Sbjct: 677 ---DREWSLLLARNRDLI----EERALAAACERADIVVADRFLPRSCK-PRWLKADRSLL 728
Query: 355 QKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ G L + + + + + H W
Sbjct: 729 LQSGGLALNLKDQQ-------IVSVAESQGGHGWW 756
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 74/213 (34%), Gaps = 14/213 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ RL PP+ P PG +DF ++++KG+S G +++ + + I
Sbjct: 219 GAVVRMRVRLMPPASPMLPGAYDFARAAWFKGLSGTGSVLGDIEIVEPAPQTSG-----I 273
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPILSFVV 126
++++++ +R + A+ F I + ++LAI L
Sbjct: 274 AAMQRALSAHVRDRVDGSAGTIAAAFASGDRGAIAEKDEDAMRDAGLTHLLAISGLHVSA 333
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ A I L +L+L P + L + ++ G T
Sbjct: 334 VIAAAYFIALKLLAL--FPAIALRVRLPVAAAAFGALAGIAYTLLTGAQVPTVRSCAAAM 391
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+L+ ++ + +L +P S
Sbjct: 392 LVLIALALGREALSLRMVAAAAVFVLLLWPESV 424
>gi|221638397|ref|YP_002524659.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides KD131]
gi|221159178|gb|ACM00158.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides KD131]
Length = 684
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 59/373 (15%), Positives = 115/373 (30%), Gaps = 39/373 (10%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + I L P G F + +A+ + ++ + +S
Sbjct: 341 DRRALSMRSFALSAIIILLWQPETLLEAG-----FQMSFAATAALIWGFNALRERVHPKS 395
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ W + G S F HF+ I VYGL+ N++A+P++
Sbjct: 396 LSRWVAPFF----------MLVVASLIGGLSTGPFAAAHFNRIAVYGLLGNLMAVPVMEL 445
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVTI 183
+V+PA +A LL L P VM G I+ +AH ++ + +
Sbjct: 446 LVMPAAAVAALLAPLGAAGPPLWVMEQGARWILWVAHWVAALPGAVRAVVSPGPWVLPLL 505
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ L ++ + R G G + + P L ++ G LV L+ +
Sbjct: 506 ALGALWLMLWRGRARLAGL---GGMATAFLLWSAAERPPLFVAADGALVGLMGPEGRALS 562
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ F W +A + + ++ +
Sbjct: 563 DARGGGFAARSWLENDGDLADQAAAAARPGFEGPREARRFQ------------------- 603
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
V++ D + +C + ++I LLI L + G+L I
Sbjct: 604 LNGLPGVVLKGKGAADHLPEACASARLVILAAPYEGPAP-GACLLIDRTSLARTGALAIG 662
Query: 364 IIPPSNDNDKVKF 376
+
Sbjct: 663 EEAGDLRLQPARI 675
Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 8/207 (3%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
T+ L PP PA PG FDF +Y+ + A+G+ + ++ S+ + ++ +
Sbjct: 159 GMTVALTGHLDPPLPPAEPGGFDFRRMAYFDRLGAVGFTRTPVVLLESAHAGDSPVNRLR 218
Query: 74 SSIKQSFLNEIRANIGTYGSASA----SIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++I++ G + +A + + GL A+ILAI L+ ++
Sbjct: 219 TAIREGVQARFPGEAGAFTAAVLTGDEAGISAATMEDLRRSGL-AHILAISGLNMSLLAG 277
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFL 188
+ ++ L +P + I +A + + G +P ++ L
Sbjct: 278 FVFGLVRH--GLALVPPLALRLPTKKIAAVAAFLGTGFYLLMSGGNVPALRSFVMIAVML 335
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTF 215
V + S + II+L+
Sbjct: 336 AAVLADRRALSMRSFALSAIIILLWQP 362
>gi|84515590|ref|ZP_01002952.1| competence protein [Loktanella vestfoldensis SKA53]
gi|84510873|gb|EAQ07328.1| competence protein [Loktanella vestfoldensis SKA53]
Length = 688
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 57/388 (14%), Positives = 126/388 (32%), Gaps = 48/388 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ I + P PG F +F++ ++ +
Sbjct: 335 RRALTLRGVAIAAIIVLVWQPEALTGPG-FQMSFAATIALVAVF-------------RAL 380
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++ + ++ +++ + + + HF+ + YGLIAN++++P++ +
Sbjct: 381 RGAKLHRLPRWTRPVMSVFVSSL--VAGLATAPYAAAHFNIMSHYGLIANLISVPLMGVL 438
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-RIPETSFVTIV 184
V+PA ++A L L L I VM GL I+ +A + N P +
Sbjct: 439 VMPAAVLAACLWPLGLAWIGLAVMEPGLRWILFVAQTTAAQPNAVSHVIAPPGAVLPILT 498
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+ L ++ + R + + + P LL+++ G L+ ++ +
Sbjct: 499 LALLWLILWQGRAR---FAGLAFAALAFVIWQQGTRPALLVADDGGLIGVLGPEGRSLSK 555
Query: 245 SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVG 304
SF W P + + +Q + + + +
Sbjct: 556 PTGGSFSAGIWLENDGAPVAQDIAAARGGVQRDGRVVTAML-------------GEWRIV 602
Query: 305 CHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITI 364
K C +D+LI D + C+ + L++ G+L + +
Sbjct: 603 QVSG-------KTALAALQGCGGADVLIVNQVDEVARPCH---VYDLTGLRRTGALAMDL 652
Query: 365 IPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ I S + PW
Sbjct: 653 TATGDL-----RIETSRARAGNRPWNGR 675
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + T + LSPP+GPA PG FDF +++ G+ A+G Y+ ++ +
Sbjct: 141 DQPFSDYRPGTVLMMTGHLSPPAGPAEPGGFDFQRHAWFLGLGAVG--YTRNPVLRLAAP 198
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+I +++ + ++ + A A+ +
Sbjct: 199 AAPDAMMRIFALRMAISRAVQEAMPGEAGAFAAALMT 235
>gi|126737890|ref|ZP_01753620.1| competence protein [Roseobacter sp. SK209-2-6]
gi|126721283|gb|EBA17987.1| competence protein [Roseobacter sp. SK209-2-6]
Length = 671
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 61/381 (16%), Positives = 122/381 (32%), Gaps = 42/381 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ + + + P F +F++ + + P
Sbjct: 329 ILLNRRALSLRSVAIAAILILVIRPESLLS-AGFQMSFAATTALVVTFSWLREAPAFEMP 387
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
A+ + F HF+ + YGL+AN+LA+P+
Sbjct: 388 PVLRPPVAL---------------LISSFVAGAATAPFGAAHFNLLSHYGLLANLLAVPV 432
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSF 180
+ VVIPA ++A+ L+ L L+ I + GL I+ + ++ N +
Sbjct: 433 MGIVVIPATVLALCLLPLGLEWIALRFVEMGLSWILAVGEFVATLPNSQSSVQAANPYVL 492
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ L + + R +G I +G+ L + P LLIS G LV ++ +
Sbjct: 493 PVMSFGALFVFLWRGKARWLGGIPVGVA---LVVWAIDQRPLLLISPTGGLVGVLQEEGR 549
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ S SF S W + Q+ +
Sbjct: 550 SLSRSETQSFAASNWLRRDGDDATQFQAAQRAK-------------------GPAALPGI 590
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ +++ KR +C DI ++ + + TP+ L GS+
Sbjct: 591 VRFNLQKGEIVHFQGKRATKEVQTCNAGDIFVSNTALKAS---GGCRVFTPDELSLHGSV 647
Query: 361 EITIIPPSNDNDKVKFIIKSA 381
++ + V +
Sbjct: 648 QMGVDGKFLTARDVTGERIWS 668
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 36/228 (15%), Positives = 78/228 (34%), Gaps = 16/228 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ A L PP GP P FDF +++ + A+GY + ++ + + +
Sbjct: 152 GVRLAATAHLMPPQGPVEPFGFDFRRHAWFLRLGAVGYSAAPIMVMKPTPA------NWM 205
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVV 126
S++ +R + A ++ + L +A++LAI L +
Sbjct: 206 QSLRWRLSEGLRNRLPGEPGAVSAAITTGDRSAVSQRTLRLLRESNLAHLLAISGLHMGL 265
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ + ++ + +L F + I +V + G + +V
Sbjct: 266 LSGFVFSLFRFVFAL-WPAFALRYEAKKIAAACGLCAAVFYLFLSGGSVASQRAFVMVAV 324
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTF--PYSFSPDLLISEKGNLV 232
F L + + S+ I +I++ S + + LV
Sbjct: 325 FFLAILLNRRALSLRSVAIAAILILVIRPESLLSAGFQMSFAATTALV 372
>gi|328543727|ref|YP_004303836.1| ComEC/Rec2-related protein [polymorphum gilvum SL003B-26A1]
gi|326413471|gb|ADZ70534.1| ComEC/Rec2-related protein [Polymorphum gilvum SL003B-26A1]
Length = 763
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 62/353 (17%), Positives = 134/353 (37%), Gaps = 10/353 (2%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P PG F +F++ I+ G + P+ +++ +
Sbjct: 401 SPESLFAPG-FQMSFAAVLCLIAVYGAWARRPRAAGFERRRAAGAAERMLR-RAGLWLTG 458
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+ I + HF YGLI N+LA+P++SFVV+PAG++A+ L+ +
Sbjct: 459 LVVTSLVAGVATGIVGVYHFERASPYGLIGNLLAMPVVSFVVMPAGVLALALLPFGVAAG 518
Query: 145 PFGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
P +M G++ ++ A NE +G +P ++ ++ MV +R
Sbjct: 519 PLWIMGRGIEAMLAAARWTQALTPNEGVVGSLPASAACLLIGGLFAMVLAAGRMRLAALA 578
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPF 263
+G+ + + D+ I ++G +A D + + + P F W A
Sbjct: 579 PLGLGLALALAH---RPADVHIPDRGVGLAARDGSGTLRVSARRPGFASEGWLRAEAVAP 635
Query: 264 HEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
P + + Q++ ++ +L G + + + +++ + +
Sbjct: 636 SAFPSRRMTEEQQRCDAAGCVVLAHAPSAPGS--DAESARGPRTAPLTIALVRDRRALPT 693
Query: 324 SCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
C +D++IT + + C L++ G+L + ++ V+
Sbjct: 694 DCVRADVVIT--QLQAPEGCGGQLVVDAVTRATTGALALWLVAEEGRTRIVRL 744
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A + ARL PPSGP PG +DF F ++Y+GI A G+ + + +
Sbjct: 190 LAAGDAVALRARLFPPSGPVRPGGYDFAFRAFYQGIGATGFAFGAVQPVDLGPRPAALEI 249
Query: 71 KK-ISSIKQSFLNEIRANIGTYGSASASIF--------LIKHFHCIPVYGLIANILAIPI 121
++ ++ ++ IR +G + + ++ + +A++LAI
Sbjct: 250 RRQVALVRDGLGERIRRQLGDGDAGAIAVALLVGLRGGISAEAQDSLRQAGLAHVLAISG 309
Query: 122 LSFVVIPAGLIAILLMIL 139
L + G+ A +L +L
Sbjct: 310 LHMALFSGGVYAAVLAVL 327
>gi|163742787|ref|ZP_02150172.1| competence protein [Phaeobacter gallaeciensis 2.10]
gi|161384042|gb|EDQ08426.1| competence protein [Phaeobacter gallaeciensis 2.10]
Length = 690
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/382 (13%), Positives = 125/382 (32%), Gaps = 35/382 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A + + P PG F +F++ I G
Sbjct: 333 VLLDRRALSLRAVALAAMVILVLRPESLLSPG-FQMSFAATTALIVVFGGLRDRLTPTGP 391
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + F HF+ I YGL+AN+LA+P+
Sbjct: 392 GWLRMAAGV---------------VLSSLIAGVATAPFGAAHFNMISHYGLLANVLAVPV 436
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ +V+PA ++++ L + + +M G+ I+ +A+ ++ +P +
Sbjct: 437 MGALVVPAAVLSLCLAPVGASWVGLALMDLGIGWILFVANWVAALDGAQGAVPMPPALVL 496
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
+V L++ + + + + ++ + S P++L++ G +V ++
Sbjct: 497 PLVALGGLLLGLWRGRLRLLGVPVLLGGALM--WHGSPRPEVLVAPNGGIVGVLTAEGRA 554
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
+ + + +W + +A Q L ++ K +
Sbjct: 555 LSRAKGHGYAAERWAENDGSLRTQAEGAQLWQLVAGPEAPGKSVTAY------------- 601
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
+ +I + K C +++I+ L+ + L + GS++
Sbjct: 602 -LAATDQRLIHVIGKAAAEALTVCAADEVVISAKSVAPV---GDCLVFDADALHRLGSVQ 657
Query: 362 ITIIPPSNDNDKVKFIIKSAIE 383
+ V + +
Sbjct: 658 MDAAGRWTSVRDVVGARLWSHD 679
Score = 43.6 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 12/128 (9%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ A L PP GP P FDF ++++ + A+GY +I S
Sbjct: 154 LGDRVMTTAHLMPPQGPVEPHGFDFRRHAWFQQLGAVGYTRVPVLIINRSPRDL-----P 208
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
+ ++Q IR+ + AS IP L +A++LAI L
Sbjct: 209 VEQLRQRLSTGIRSQMPVATGGFASAITTGDRSAIPQVALEALRASNLAHLLAISGLHMG 268
Query: 126 VIPAGLIA 133
++ +
Sbjct: 269 LLAGVVFG 276
>gi|217977842|ref|YP_002361989.1| ComEC/Rec2-related protein [Methylocella silvestris BL2]
gi|217503218|gb|ACK50627.1| ComEC/Rec2-related protein [Methylocella silvestris BL2]
Length = 779
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 62/401 (15%), Positives = 129/401 (32%), Gaps = 53/401 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ L+ P +F + ++A+ Y S+E
Sbjct: 368 DRQALTMRNLAFAALFVILAEPEAIMG-----ASFQLSFAAVAALVAVYEGRMAAASAER 422
Query: 65 HNTWTWKKISSIKQS---FLNEIRANIGTYGS----------ASASIFLIKHFHCIPVYG 111
+ + F +RA + A+ + F+ +FH + Y
Sbjct: 423 EEAPILRSKPVAGEGARLFWTSVRARLSQGPGGLLFATFCATAATASFMAYNFHELSPYV 482
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-F 170
LI N L + ++ +P L+ LL + LD + + +G+D ++ A ++
Sbjct: 483 LIGNPLTLTVIEVFAVPGALLGTLLYPIGLDPWVWRYLGFGVDGVMWAARQVGQLPGASI 542
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
+ S + + L M +T + +I + + I LF D+ ++ G
Sbjct: 543 HLPAFAPFSLAFLTLAVLCMTLWRTLL--FRAIALPLLAIGLFGAASGPKFDVAVAPGGE 600
Query: 231 LVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSM 289
A ++ + P F QW A A V
Sbjct: 601 AAAYRGEDGRLAVLAARPNLFAAEQWLRADADGRPAAAAV-------------------- 640
Query: 290 QPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLI 349
+ K+ CVG + ++ + C +DI++T K C +++
Sbjct: 641 ---RKSACDKAACVGRLADGRTLSLVVDRAAFAEDCLRADIIVT--PLFAPKGCAAQIVL 695
Query: 350 TPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ L+K G++ + + P + + PW+
Sbjct: 696 DRDALKKTGAVTLAMTPAGLTRAAARSLE------EDRPWS 730
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ PF A T I+ ARL PPS + PG +DF +++ + +G + + + E
Sbjct: 172 RRAPPFEAGTYIKLKARLLPPSRASLPGGYDFARDAWFARLGGVGNALGRIETLAAPEP 230
>gi|307942168|ref|ZP_07657519.1| competence protein [Roseibium sp. TrichSKD4]
gi|307774454|gb|EFO33664.1| competence protein [Roseibium sp. TrichSKD4]
Length = 708
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 70/383 (18%), Positives = 122/383 (31%), Gaps = 26/383 (6%)
Query: 16 TIEGIARL-SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI-PKMIYSSESHNTWTWKKI 73
I G+A L P PG F +F++ ++A S +
Sbjct: 342 AIAGLALLIMAPENLFHPG-FQMSFAAVLCLVAAYEALRERKSGKEKSGGRLTAPGPNRG 400
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
S + + HF I YGL+ NIL +PI S V +P GL+A
Sbjct: 401 VLTLISKWAGGLILTSLIAGLATGVVGAYHFGRIAPYGLVGNILGMPIFSLVTMPMGLLA 460
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVF 192
+LL+ L + P VM L +I+ +A + + P S + +
Sbjct: 461 LLLLPFGLASFPVTVMEASLSLILEMARFTANLDAGRGHVVPPPAASAFLLFCGLFGGLV 520
Query: 193 CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF 252
+ +R + + + S PD+ IS G +A D + + S F
Sbjct: 521 LRGRLRIAAFLP---AFLGSALWLLSNGPDIQISATGLHLAARDADGVFRLTSTRQGFRN 577
Query: 253 SQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIV 312
W + D Q++ C+ +F V + +IV
Sbjct: 578 EMWLQREGMDVSTLSELPMADDQKRCDDEG-------------CVVHAFPVNGLANPLIV 624
Query: 313 GVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITI----IPPS 368
+ + C +D++IT + L + G++ I +
Sbjct: 625 ALPRTVSAAIQDCSRADLVITDFDMSGANCT--AQLFDRSKRAQTGAVSIWLSSMRTDEE 682
Query: 369 NDNDKVKFIIKSAIENLHFPWTK 391
I++A PW +
Sbjct: 683 MQARTGIERIENAKSIPARPWHQ 705
Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/231 (19%), Positives = 91/231 (39%), Gaps = 13/231 (5%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES-- 64
K +TI ARL PP+GPA PG +DF+F +Y++ I A G+ + P + + S
Sbjct: 136 KESTVRVGSTISVRARLFPPAGPAVPGGYDFSFIAYFQKIGASGFAFGKPDEVSGAASRG 195
Query: 65 HNTWTWKKISSIKQSFLNEIR--ANIGTYGSASASIFLIKHFH------CIPVYGLIANI 116
+ + ++ ++ S + G+ A++ + H + +A+I
Sbjct: 196 RVSEFMRVLAGVRASLSERLLKFTQTPDAGALVAALLVGNRDHISDETEDVLRQAGLAHI 255
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
LAI L + G ++L+M+L+L + + + ++ G
Sbjct: 256 LAISGLHMALFAGGAFSLLVMLLALSPRFALI--QPIHQFAALGALVAATLYLLISGASV 313
Query: 177 ETSFVTIVVEFLLMVFCKTNIRH-IGSIMIGITIIILFTFPYSFSPDLLIS 226
T I++ + + + S+ I +++ F P +S
Sbjct: 314 ATQRSFIMIALVFLGILIGRRGLTLRSVAIAGLALLIMAPENLFHPGFQMS 364
>gi|260426889|ref|ZP_05780868.1| competence protein [Citreicella sp. SE45]
gi|260421381|gb|EEX14632.1| competence protein [Citreicella sp. SE45]
Length = 680
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 60/387 (15%), Positives = 126/387 (32%), Gaps = 51/387 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ A + + P PG F +F++ ++ G+
Sbjct: 337 DRRALSLRAVALAALVVLVLRPEALLGPG-FQMSFAATVALVTVFGWLRDR--------G 387
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + S + + + HF+ I YGL+AN++++PI+
Sbjct: 388 AERNAPRWMRPVISVV------VSSATASLATAPVAMAHFNLISHYGLVANLVSVPIMGM 441
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFVTI 183
VV+P ++A LL+ LD + +M LD I+ +A +S P +
Sbjct: 442 VVVPMAVVAALLLPFGLDWLALWLMKPALDWILFVARTVSGWEGSLGHVLAPGPMVLPLL 501
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ LL+ + R G + + + + S PD+LI++ G LV + +N +
Sbjct: 502 ALGGLLLCLWQGRFRFAGLVPVALAAALWS---ASARPDVLIADTGALVGAMTENGRALS 558
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
F+ W + +++ +
Sbjct: 559 RERGAGFLAGIWLENDGQAGGQEEAAALWPP--------------------GAEERTARI 598
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
V R C S+++++++ C+ + PE L+ G++ +
Sbjct: 599 TLAGLRVTHLQGSRAAQAFGGCDGSELVVSSVDIPEIPGCD---IYDPERLRATGAVAVW 655
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ P H W
Sbjct: 656 LTPQGPRIVTA---------AGHRLWH 673
Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 53/137 (38%), Gaps = 12/137 (8%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
T+ + A T+ L+PP G A PG FDF +++ + A+GY + ++ E
Sbjct: 147 TQGFLTPAAGQTVILTGHLAPPGGAAEPGGFDFRRHAWFLRLGAVGYTRTPVLLLEPPEG 206
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANIL 117
+ + + ++A + A A+ + + + +A++L
Sbjct: 207 G-----QHVLRARMWLSARVQAALPGESGAFAAAIMTGDRSGMGQETLDALRHSNLAHLL 261
Query: 118 AIPILSFVVIPAGLIAI 134
AI L ++ +
Sbjct: 262 AISGLHMGLLAGFVFGA 278
>gi|163854078|ref|YP_001642121.1| ComEC/Rec2-related protein [Methylobacterium extorquens PA1]
gi|163665683|gb|ABY33050.1| ComEC/Rec2-related protein [Methylobacterium extorquens PA1]
Length = 752
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 54/370 (14%), Positives = 117/370 (31%), Gaps = 40/370 (10%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P +F + ++ + + ++ + + ++ +
Sbjct: 388 REPEALLGP-----SFQMSFGAVAGLIACAPLIDGRVFRTDSSSRIARSAFWVAKAVVGT 442
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + + + F HF + +GL+ N L +P++S V+PA ++ +L +LD
Sbjct: 443 LATTL--VAQLATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDR 500
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ +M + ++ I+ I+ + + + + LL + +R +
Sbjct: 501 PVWWLMGLAVRGMLDISAWIAGFGQANVVLPAFGTGALMLLAAALLLATLPVSRLRFLAL 560
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+ G+ + D+ I G A+ K+ + PP F+ QW A
Sbjct: 561 VPAGLGV---ALAASPIRYDIYIDRDGAGAAVRGKDGRLVVLGRPPGFVLEQWLKADGDG 617
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
+ + C V ++ K
Sbjct: 618 RPPEAATGAAGPRC---------------------DRIGCTLTAVDGRAVALVMDKRAFA 656
Query: 323 LSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAI 382
C +DILIT +R C L+ L +G+ I + + I+ +
Sbjct: 657 EDCARADILITRLRAPP--GCAAPLIADRTFLAVRGATAIRLGTEGPE------IVTARG 708
Query: 383 ENLHFPWTKH 392
PW
Sbjct: 709 AGQPKPWQPR 718
Score = 44.0 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 15/197 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--IYSSE 63
+ I ARL PP PG +DF +Y++GI A+G ++
Sbjct: 173 RAAQAVRPGDAIRATARLLPPPEAVRPGGYDFARDAYFRGIGAVGSLVGKVEVASPAEPL 232
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANI 116
+ + I + + +F I IG A A+ + I I ++
Sbjct: 233 ALSLRLTAAIDAARNAFTRRITDAIGGQAGAVAAALVTGKRGLISNETNDVLRAAGIYHV 292
Query: 117 LAIPILSFVVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
++I L V+ + + L+ + P +A G ++ + + + +
Sbjct: 293 VSISGLHMVLAAGVVFWLVRAGLALVPVLALAWPIKKIAAG-TAMLAVTAYCAFSGWDVA 351
Query: 172 IGRIPETSFVTIVVEFL 188
R + V + +
Sbjct: 352 AERALIMTLVMLGAILV 368
>gi|83942600|ref|ZP_00955061.1| competence protein [Sulfitobacter sp. EE-36]
gi|83846693|gb|EAP84569.1| competence protein [Sulfitobacter sp. EE-36]
Length = 682
Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 62/390 (15%), Positives = 128/390 (32%), Gaps = 54/390 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L I ++ A I + P G F +F++ ++ G+ + +
Sbjct: 337 LIIGRRALTLRAVAIAATIVLVLRPEALTGSG-FQMSFAATTGLVAIFGWLRNAEVSLGP 395
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S++ F + HF+ I YGL+AN+L++P+
Sbjct: 396 KWLAPAVATVISSAVAGGF---------------TAPIGAAHFNTIAQYGLVANLLSVPL 440
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSF 180
+ +V+PA + A+++ L L+ IP VM GL I+ +A ++ P
Sbjct: 441 MGILVMPAAVAALVMAPLGLEWIPLQVMGAGLRWILLVAQGVAEIDGAQGHVAAPGPWVL 500
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + FL ++ + +R G G I + + P +LIS+ G+LV ++
Sbjct: 501 PLLALGFLWLLLWQGWLRFAGL---GAVIAAGVLWHGAERPTVLISDTGSLVGVMTPTGR 557
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + F+ W +A + + K
Sbjct: 558 ALSKAKGAGFVALNWLENDGDGTDQARAAARWPTRPK----------------------- 594
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
++ + ++ +D +I L + P+ L+ G++
Sbjct: 595 -----IGGREVIHLSGKRARAAFGACRADQIIVLSVVPEPPLTGGCDVFEPDRLRSTGAV 649
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+T+ + WT
Sbjct: 650 ALTLYKGRVTMQTARQK------AGTRLWT 673
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 40/233 (17%), Positives = 87/233 (37%), Gaps = 14/233 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ LSPPSGP P FDF +++ G+ A+G YS ++ ++ + +
Sbjct: 156 GLGVMTTGHLSPPSGPVEPEGFDFQRHAWFAGLGAVG--YSRTPLLAATPAEAGHGGLAV 213
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVV 126
+ + I+ + A+ I L +A++LAI L +
Sbjct: 214 FRARMAASARIQRILPGDIGGFATAITTGDRSAISQDALQDLRASNLAHLLAISGLHMGL 273
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG--RIPETSFVTIV 184
+ A + L ++L+L +P+ + W I ++ + G E +F+ +
Sbjct: 274 LSAVVFGALRIVLTL--VPWIALRWPTRSIAAAGALVAASGYLLLSGGNVATERAFIMVA 331
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS-FSPDLLISEKGNLVALVD 236
V ++ + + + +++L + + + LVA+
Sbjct: 332 VALGALIIGRRALTLRAVAIAATIVLVLRPEALTGSGFQMSFAATTGLVAIFG 384
>gi|240141532|ref|YP_002966012.1| hypothetical protein MexAM1_META1p5131 [Methylobacterium extorquens
AM1]
gi|240011509|gb|ACS42735.1| conserved membrane hypothetical protein; ComEC/Rec2 family domain
[Methylobacterium extorquens AM1]
Length = 752
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 52/353 (14%), Positives = 114/353 (32%), Gaps = 34/353 (9%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P +F + ++ + + ++ + S + ++ +
Sbjct: 388 REPEALLGP-----SFQMSFGAVAGLIACAPLIDGRVFRTHSSSRIARSASWVAKAVVGT 442
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + + + F HF + +GL+ N L +P++S V+PA ++ +L +LD
Sbjct: 443 LATTL--VAQLATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDR 500
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ +M + ++ I+ I+ + + + + LL + +R +
Sbjct: 501 PVWWLMGLAVRGMLDISAWIAGFGQANVVLPAFGTGALMLLAAALLLATLPVSRLRLLAL 560
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+ G+ + D+ I G A+ K+ + PP F+ QW A
Sbjct: 561 VPAGLG---IALAASPIRYDIYIDRDGAGAAVRGKDGRLVVLGRPPGFVLEQWLKADGDG 617
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
+ + C V ++ K
Sbjct: 618 RPPEAATGAAGPRC---------------------DRIGCTLTAMDGRAVALVMDKRAFA 656
Query: 323 LSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
C +DILIT +R C L+ L +G+ I + + +
Sbjct: 657 EDCARADILITRLRAPP--GCAAPLIADRTFLAVRGATAIRLGTEGPEIVTAR 707
Score = 43.6 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 15/197 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--IYSSE 63
+ I ARL PP PG +DF +Y++GI A+G ++
Sbjct: 173 RAAQAVRPGDAIRATARLLPPPEAVRPGGYDFARDAYFRGIGAVGSLVGKVEVGPPAEPL 232
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANI 116
+ + I + + +F I IG A A+ + I I ++
Sbjct: 233 ALSLRLTAAIDAARNAFTRRITDAIGGQAGAVAAALVTGKRGLISNETNDVLRAAGIYHV 292
Query: 117 LAIPILSFVVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
++I L V+ + + L+ + P +A G ++ + + + +
Sbjct: 293 VSISGLHMVLAAGVVFWLVRAGLALVPMLALAWPIKKIAAG-TAMLGVTAYCAFSGWDVA 351
Query: 172 IGRIPETSFVTIVVEFL 188
R + V + +
Sbjct: 352 AERALIMTLVMLGAILV 368
>gi|254564049|ref|YP_003071144.1| hypothetical protein METDI5735 [Methylobacterium extorquens DM4]
gi|254271327|emb|CAX27339.1| conserved membrane protein of unknown function; ComEC/Rec2 family
domain [Methylobacterium extorquens DM4]
Length = 752
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 54/370 (14%), Positives = 112/370 (30%), Gaps = 40/370 (10%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P +F + ++ + P + ++ + S+ +
Sbjct: 388 REPEALLGP-----SFQMSFGAVAGLIA--CAPLIDGRVFRTDSSSRIARSASWVAKAVV 440
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + F HF + +GL+ N L +P++S V+PA ++ +L +LD
Sbjct: 441 GTLATTLVAQLATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDR 500
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ +M + ++ I+ I+ + + + + LL + +R +
Sbjct: 501 PVWWLMGLAVRGMLDISAWIAGFGQANVVLPAFGTGALMLLAAALLLATLPVSRLRFLAL 560
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+ G+ + D+ I G A+ K+ + P F+ QW A
Sbjct: 561 VPAGLGV---ALAASPIRYDIYIDRDGAGAAVRGKDGRLVVLGRPTGFVLEQWLKADGDG 617
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
+ + C V ++ K
Sbjct: 618 RPPEAATGAAGPRC---------------------DRIGCTLTAVDGRAVALIMDKRAFA 656
Query: 323 LSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAI 382
C +DILIT +R C L+ L +G+ I + + +
Sbjct: 657 EDCARADILITRLRAPP--GCAAPLIADRTFLAVRGATAIRLGTAGPEITTAR------G 708
Query: 383 ENLHFPWTKH 392
PW
Sbjct: 709 AGQPKPWQPQ 718
Score = 42.9 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 15/197 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--IYSSE 63
+ I ARL PP PG +DF +Y++GI A+G ++
Sbjct: 173 RAAQAVRPGDAIRATARLLPPPEAVRPGGYDFARDAYFRGIGAVGSLVGKVEVGPPAEPL 232
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK-------HFHCIPVYGLIANI 116
+ + I + + +F I IG A A+ + + + I ++
Sbjct: 233 ALSLRLTAAIDAARNAFTRRITDAIGGQAGAVAAALVTGKRGLISNETNDVLRAAGIYHV 292
Query: 117 LAIPILSFVVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
++I L V+ + + L+ + P +A G ++ + + + +
Sbjct: 293 VSISGLHMVLAAGVVFWLVRAVLALVPVLALAWPIKKIAAG-TAMLGVTAYCAFSGWDVA 351
Query: 172 IGRIPETSFVTIVVEFL 188
R + V + +
Sbjct: 352 AERALIMTLVMLGAILV 368
>gi|218533023|ref|YP_002423839.1| ComEC/Rec2-related protein [Methylobacterium chloromethanicum CM4]
gi|218525326|gb|ACK85911.1| ComEC/Rec2-related protein [Methylobacterium chloromethanicum CM4]
Length = 752
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 56/370 (15%), Positives = 114/370 (30%), Gaps = 40/370 (10%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P +F + ++ + P + ++ + S+ +
Sbjct: 388 REPEALLGP-----SFQMSFGAVAGLIA--CAPLIDGRVFRTDSSSRIARSASWVAKAVV 440
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + F HF + +GL+ N L +P++S V+PA ++ +L +LD
Sbjct: 441 GTLATTLVAQLATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDR 500
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ +M + ++ I+ I+ + + + + LL + +R +
Sbjct: 501 PVWWLMGLAVRGMLDISAWIAGFGQANVVLPAFGTGALMLLAAALLLATLPVSRLRLLAL 560
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+ G+ + D+ I G A+ K+ + PPSF+ QW A
Sbjct: 561 VPAGLGV---ALAASPIRYDIYIDRDGAGAAVRGKDGRLVVLGRPPSFMLEQWLKADGDG 617
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
+ + C V ++ K
Sbjct: 618 RPPEAATGAAGPRC---------------------DRIGCTLTAVDGRAVALVMDKRAFA 656
Query: 323 LSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAI 382
C +DILIT +R C L+ L +G+ I + + +
Sbjct: 657 EDCARADILITRLRAPP--GCAAPLIADRTFLAVRGATAIRLGTAGPEITTAR------G 708
Query: 383 ENLHFPWTKH 392
PW
Sbjct: 709 AGQPKPWQPQ 718
Score = 42.9 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 32/197 (16%), Positives = 68/197 (34%), Gaps = 15/197 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--IYSSE 63
+ I ARL PP PG +DF +Y++GI A+G ++
Sbjct: 173 RATQAVRPGDAIRATARLLPPPEAVRPGGYDFARDAYFRGIGAVGSLVGKVEVGPPAEPL 232
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK-------HFHCIPVYGLIANI 116
+ + I + + +F I IG A A+ + + + I ++
Sbjct: 233 ALSLRLTAAIDAARNAFTRRITDAIGGQAGAVAAALVTGKRGLISNETNDVLRAAGIYHV 292
Query: 117 LAIPILSFVVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
++I L V+ + + L+ + P +A G ++ + + + +
Sbjct: 293 VSISGLHMVLAAGVVFWLVRAGLALVPMLALACPIKKIAAG-TAMLGVTAYCAFSGWDVA 351
Query: 172 IGRIPETSFVTIVVEFL 188
R + V + +
Sbjct: 352 AERALIMTLVMLGAILV 368
>gi|294010831|ref|YP_003544291.1| ComEC/Rec2-related protein [Sphingobium japonicum UT26S]
gi|292674161|dbj|BAI95679.1| ComEC/Rec2-related protein [Sphingobium japonicum UT26S]
Length = 387
Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 55/383 (14%), Positives = 121/383 (31%), Gaps = 41/383 (10%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + P P F +F++ +S + + T+
Sbjct: 26 LRLVAAGALVVLVLWPEALVGPS-FQMSFAAVIALVS-----------LGEHPAFRTFVA 73
Query: 71 KKISSIKQSFLNEIRANI--GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+ + + + + G + + HFH + G +AN++AIP+ + VV+P
Sbjct: 74 ARDEGMWRRIGRNLAGMLATGLAVELVLAPIALFHFHKAGMLGSVANLVAIPLTTLVVMP 133
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI-PETSFVTIVVEF 187
+A+L + + + A LD+++ +AH ++ + + F I++
Sbjct: 134 LEAMALLFDLGGWGAPFWWLTARALDLLLLVAHGVASSPWAVVLAPAQSGAVFGLILLGM 193
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN-TLISNYSN 246
L + ++ R G + + + ++ P P +LIS G VAL + + +
Sbjct: 194 LWCLLWRSGWRWAGLMPVSACMTMILASPM---PAILISGDGRHVALRTADGGMAMLRAR 250
Query: 247 PPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCH 306
+ + + + + L + S +
Sbjct: 251 AGGYARDVMAESAGHDGTLQALTTLPQARCSPDLCAVRLRGGGRYWNLLLTRSSVKI--- 307
Query: 307 RSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIP 366
++ C +DI+++ R L L + G L I +
Sbjct: 308 ----------DNAILARDCAHADIVVSDRRLPGAC-RPRWLKADRRFLARTGGLAIDLDH 356
Query: 367 PSNDNDKVKFIIKSAIENLHFPW 389
+ K N PW
Sbjct: 357 GAIRGAK--------ASNDEHPW 371
>gi|163736566|ref|ZP_02143985.1| competence protein [Phaeobacter gallaeciensis BS107]
gi|161390436|gb|EDQ14786.1| competence protein [Phaeobacter gallaeciensis BS107]
Length = 689
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/387 (13%), Positives = 131/387 (33%), Gaps = 44/387 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ A + + P PG F +F++ I G +
Sbjct: 335 LDRRALSLRAVALAAIVILVLRPESLLSPG-FQMSFAATTALIVVFG---------GLRD 384
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + L+ + + + F HF+ I YGL+AN+LA+P++
Sbjct: 385 RLTPTGPRWLRMAAGVVLSSLI------AGVATAPFGAAHFNMISHYGLLANVLAVPVMG 438
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+V+PA ++++ L + + +M G+ I+ +A+ ++ +P + +
Sbjct: 439 ALVVPAAVLSLCLAPVGASWVGLALMDLGIGWILFVANWVAALDGAQGAVPMPPALVLPL 498
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
V L++ + + + + ++ + S PD+L++ G +V ++ +
Sbjct: 499 VALGGLLLGLWRGRLRLLGVPVLLGAALI--WHGSPRPDVLVAPNGGIVGVLRAEGRALS 556
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ + +W + +A Q L ++ K + +
Sbjct: 557 RAKGHGYAAERWAENDGSLRTQAEGAQLWPLVAGPEAPGKSVTAY--------------L 602
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
+I + K C +++I+ L+ + L + GS+++
Sbjct: 603 AATDQRLIHVIGKAAAEALTVCAADEVVISAKSVAPV---GDCLVFDADALHRLGSVQM- 658
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWT 390
D I W+
Sbjct: 659 --------DAAGRWISVRDVVGARLWS 677
Score = 42.9 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 12/128 (9%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ A L PP GP P FDF ++++ + A+GY +I S
Sbjct: 154 IGDRVMTTAHLMPPQGPVEPHGFDFRRHAWFQQLGAVGYTRVPVLIINRSPRDL-----P 208
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
+ ++Q IR+ + AS IP L +A++LAI L
Sbjct: 209 VEQLRQRLSTGIRSQMPVATGGFASAITTGDRSAIPQVALEALRASNLAHLLAISGLHMG 268
Query: 126 VIPAGLIA 133
++ +
Sbjct: 269 LLAGVVFG 276
>gi|225629731|ref|ZP_03787690.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591415|gb|EEH12496.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 522
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 60/325 (18%), Positives = 117/325 (36%), Gaps = 41/325 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +KY A + + P PG F +FS+ +++
Sbjct: 238 IMIERKYRGLIAIAFAAAVILIIEPEVILKPG-FQMSFSAVLALVASYQI---------- 286
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
K+ IK S + + I +F+ + G+I N++AIPI
Sbjct: 287 -------NANKLFKIKIMKYFVSIMISSVIASLATVPYTIYNFNYFSISGIITNLVAIPI 339
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSF 180
++ ++IP G+I +LL+ ++ I ++ +D I++I + I+ R P +S
Sbjct: 340 VTLIIIPLGIIYVLLIPFGIEWIIAPLIERPIDSILYITNAIASLQYLVIPIRTFPASSI 399
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I + L + + N R G I + I + +PD+LI+ V D N L
Sbjct: 400 IIITLGLLWLCLWERNWRFFGIFFIVLGICFSTAY---KTPDILINADNVAVKESD-NLL 455
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
S +F+ W + + C
Sbjct: 456 YSLTRKNRNFVVKTWAKQNGQNQILNHKKYNNSDK-----------------RLKCND-Y 497
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSC 325
C+ ++ V + +++ I ++C
Sbjct: 498 GCIYNKGNNKSVLLAYKEEDILVNC 522
>gi|103486321|ref|YP_615882.1| ComEC/Rec2-related protein [Sphingopyxis alaskensis RB2256]
gi|98976398|gb|ABF52549.1| ComEC/Rec2-related protein [Sphingopyxis alaskensis RB2256]
Length = 719
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 60/383 (15%), Positives = 119/383 (31%), Gaps = 36/383 (9%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
I + P A P +F + ++AI + P M +
Sbjct: 353 LRLVAAGALIVLMWRPEALAGP-----SFQLSFAAVTAIVALHESPAMQAFLARRDESWA 407
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
++ G + + + HFH +YG +AN++AIP+ +FVV+PA
Sbjct: 408 FRLGR-----GIAGLLATGLVVEVALTPIALFHFHKAGLYGALANVIAIPLTTFVVMPAE 462
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVTIVVEFLL 189
+A+L + L + V L ++I +AH ++ A + P F + L
Sbjct: 463 ALALLFDSVGLGAPFWWVAEQALRLLIALAHSVAGAPGAVTTLPSFPPWGFGLTLFGGLW 522
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPP 248
++ +T R G I + +L P PDLL++ G +A+ +
Sbjct: 523 ILLWQTRWRRWGMIPLAAGAAVLLAQP---RPDLLVTGDGRHIAVPLPDGTYALLRDRAG 579
Query: 249 SFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRS 308
++ A + ++ R L + +
Sbjct: 580 DYVRDSMAEAAGIDAPLGTLADLDHVECNRDFCRWVQGAGAARRVILASRGRDRIEGADM 639
Query: 309 DVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPS 368
++ + R + + L I + L + G L + +
Sbjct: 640 AAACAAAD--------------VVISDRWLPRECAGRWLTIERDSLAETGGLALYLGERP 685
Query: 369 NDNDKVKFIIKSAIENLHFPWTK 391
+ + PW +
Sbjct: 686 KA-------VATLKSGAEHPWRR 701
Score = 41.3 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 47/131 (35%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A I ARL PP + PG +DF +++ GI A+G S +
Sbjct: 167 AGEAIGVRARLMPPPTASLPGGYDFAQRAWFDGIGAVGTVLGGVVRAPGRGSAAPPLRAR 226
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+S+ ++ I + + +A++L+I L + +
Sbjct: 227 LSAHIHRQVDGSAGGIAAALVTGDRGAISEADEEAMRRSGLAHLLSISGLHVTAVVGFAM 286
Query: 133 AILLMILSLDN 143
+ + +L+L
Sbjct: 287 LLTMRLLALSP 297
>gi|170738988|ref|YP_001767643.1| ComEC/Rec2-related protein [Methylobacterium sp. 4-46]
gi|168193262|gb|ACA15209.1| ComEC/Rec2-related protein [Methylobacterium sp. 4-46]
Length = 738
Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 54/354 (15%), Positives = 119/354 (33%), Gaps = 34/354 (9%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P G P +F + ++ + + + + ++ + + +
Sbjct: 388 REPEGLLGP-----SFQMSFAAVAGLVACARLLDGRLFAAPGAGPLGRALAWVAGTLVGT 442
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + + + F HF I +G++ N L +P++S VV+PA ++ +L +LD
Sbjct: 443 LATTL--VAQVATAPFATYHFQNIQPFGVVGNALTLPLVSVVVMPAAVLGMLAYPFTLDR 500
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ M + ++ I+ I+ + + + + LL+ +R +G
Sbjct: 501 PVWWTMGLAVRGMLDISAWIAGFDHAVVIVPAFGAGALGLLTAALLLLTLPSPRLRVLGV 560
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+ ++ + + PDL + +G AL + +++ PP+F QW A
Sbjct: 561 LP---ALVGVALAARAERPDLYVDREGAGAALRGADGRLASLGRPPAFGLEQWLRADGDA 617
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
+ CV R+ V +++ K
Sbjct: 618 RPRGDPSLARAERC---------------------DAVGCVATARNGWRVALVRDKRAFE 656
Query: 323 LSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
C +DI+I R C L++ L G+ + P +
Sbjct: 657 ADCARADIVIA--RATAPPGCAARLVLDRAFLAAHGATTVRFAPEGPVVTTARR 708
Score = 44.0 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+K P IE ARL PP PA PG +DF +Y++GI A+G +
Sbjct: 173 RKAAPLRPGDFIEAKARLLPPPEPARPGGYDFARDAYFRGIGAVGSLLGAIAVREPPAPP 232
Query: 66 N 66
Sbjct: 233 P 233
>gi|189183210|ref|YP_001936995.1| hypothetical protein OTT_0303 [Orientia tsutsugamushi str. Ikeda]
gi|189179981|dbj|BAG39761.1| hypothetical protein OTT_0303 [Orientia tsutsugamushi str. Ikeda]
Length = 682
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 73/366 (19%), Positives = 136/366 (37%), Gaps = 44/366 (12%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
++ I + P I L P P +F + + ++ Y + + I
Sbjct: 338 VVLIKRGVVPLRLVGLAAIIILLFNPEYIMHP-----SFQLSFIAVISLISCYEL-QSIT 391
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
N +S I+ F + I + S + + +I HF+ P Y ++AN+L +P
Sbjct: 392 QQHKFNVDQKDILSKIQLFFESNIYS--SAIASIATAPIVIYHFYSFPNYSVLANLLIVP 449
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETS 179
+ +F V+P LI++LLM +++N + G+D+II IA IS G I + S
Sbjct: 450 LTAFWVMPLTLISLLLMPFNIENYFLLLAGQGVDVIIKIAKIISTLPYAVTYFGHIDDVS 509
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ + FL +V R I + I II + PDL+ + + + + + N+
Sbjct: 510 LLIYLFGFLWLVIWHKPWR---MIGVVIIIIAIIRTALVSKPDLVFNGELTALGIKNSNS 566
Query: 240 --LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI 297
I SN P F + W + + + +
Sbjct: 567 KFEIHASSNMPEFFLNYWSNWYGQNEILFRNSAIKTFNHR-------------------- 606
Query: 298 KKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQ 357
S IV + + C +D++I ++ + + +I IL K
Sbjct: 607 ------IITNSGKIVAIRFKN---TDECVPADLII-SVIPNDKCKYTTAKIIDAAILNKS 656
Query: 358 GSLEIT 363
+E+
Sbjct: 657 NIVEVY 662
>gi|319408414|emb|CBI82069.1| Competence protein [Bartonella schoenbuchensis R1]
Length = 653
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 83/381 (21%), Positives = 151/381 (39%), Gaps = 40/381 (10%)
Query: 16 TIEGIARLSP-PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I G+ ++ P P F +FS+ I+ G++ + S T ++
Sbjct: 296 AIAGLVTVATIPHAILSPS-FQMSFSATAALIAVFGWW---SERRSSYTGRTTPSYVGGG 351
Query: 75 SIKQSFLNEIRANIG-TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ I + +++ I+ HF + G+I+NILA+PI+ V+P GLIA
Sbjct: 352 VLRLVLSPLILICVSSLVAGSASGIYAAYHFANVAPLGMISNILALPIVFIFVMPFGLIA 411
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
M++ L+++P +M +G+ ++ IA+ ++ F G +P ++ V + + + + F
Sbjct: 412 AFAMLVGLESLPLQIMGFGISLVTKIAYAVTAISPAFHPGFMPLSALVLLSLGLVGLTFL 471
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFS 253
KT IR SI I I I + S L+I+ +LV ++++ L + F S
Sbjct: 472 KTPIRFFFSIFIFIGIFVCMV---SSPVQLIIANNMSLVGIINERKLYIDRYYASKFTLS 528
Query: 254 QWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG 313
W+++ P L +F+C C + + V
Sbjct: 529 IWENSFHAQNAIKPTETGPSLN----------------GQFICNDN-ICTAFLENKLKVA 571
Query: 314 VLKRKDMIRLSCQLSDILITTIRDINT-KLCNVSLLITPEILQKQGSLEITIIPPSNDND 372
VL C +DI+I N + T + L +GS+ +T
Sbjct: 572 VLH---GKTDQCITADIVIEASTIRNQICDKIAPITFTLQQLLSRGSVIMTKSGN----- 623
Query: 373 KVKFIIKSAIENLHFPWTKHR 393
I + H PW HR
Sbjct: 624 -----IIWSSNGFHRPWNIHR 639
Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/251 (18%), Positives = 85/251 (33%), Gaps = 20/251 (7%)
Query: 2 LSITKKYDP--FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+ + K+ P + + G RL SGP PG +DF+F +Y+K I A G + P I
Sbjct: 84 VRLIAKHLPDGLASGDGLYGKVRLRALSGPVRPGSYDFSFYNYFKRIGAHGIYLGKPIKI 143
Query: 60 Y--SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VY 110
++ +KI +++ +I IG A+ + I
Sbjct: 144 SVTPPDTILDRVLQKIENLRIVMTQKINTAIGGEEGQIAAALITGQRGGISKDTNKALRV 203
Query: 111 GLIANILAIPILSFVVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISV 165
+A+IL+I L ++ ++ + L A + +II + +
Sbjct: 204 AGLAHILSISGLHMALLSGMVLIVIRSFLALFPNFSSYYSAKKFAAVVALIITAFYLVLS 263
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
N S + I V N G + + + S S +
Sbjct: 264 GMNIAAQRSFVMVSVLLIAVLCNHSAVTMRNFAIAGLVTVATIPHAIL----SPSFQMSF 319
Query: 226 SEKGNLVALVD 236
S L+A+
Sbjct: 320 SATAALIAVFG 330
>gi|296447145|ref|ZP_06889076.1| ComEC/Rec2-related protein [Methylosinus trichosporium OB3b]
gi|296255310|gb|EFH02406.1| ComEC/Rec2-related protein [Methylosinus trichosporium OB3b]
Length = 743
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/363 (14%), Positives = 122/363 (33%), Gaps = 43/363 (11%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN-------IGT 90
+F + ++A+ Y + + + + + + L+ +
Sbjct: 394 SFQLSFAAVAALVAVYEARGEMAAPRREPPLSAARGAPPWRENLSGLLLRGPGAPLFATF 453
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+++ + F+ +FH + Y LI N L + I+ F +PA L+ +L LD + + +
Sbjct: 454 CATSATASFMAGNFHELSPYVLIGNPLTLAIIEFFAVPAALLGAMLYPFGLDALVWSYLG 513
Query: 151 WGLDIIIHIAHRISVAHNEFCIGR-IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
+G+D++ IA I A R + V + + L V ++ + +I
Sbjct: 514 FGIDLVTRIAGFIGAAPGASLPVRSFAPFALVFLSLAVLSAVLWRSWLLRASAIPF--AA 571
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP-SFIFSQWKSALITPFHEAPH 268
I L+ D+ ++ G A+ + ++ SFI QW
Sbjct: 572 IGLYGAANGEGFDMAVAPSGEAAAVRRPSGELALLGRGKLSFIGEQWL------------ 619
Query: 269 VQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLS 328
R+ + + + CV V ++ + + C +
Sbjct: 620 ------------RADADARAPADARGVSCDELGCVTTTIDGRFVALVFDRRALIEDCARA 667
Query: 329 DILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
I+I + C +++ L + G++ + D + P
Sbjct: 668 QIVIASFDAPA--GCGAPIVLDRRKLAETGAVTLRFASERIDWRMAR------APGEDRP 719
Query: 389 WTK 391
W++
Sbjct: 720 WSR 722
Score = 39.8 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 2 LSITKKYDP-FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+ +T + +P F A I AR+ PP+ A PG +DF +++ G+ +G +++
Sbjct: 165 VRLTTRGEPKFAAGDFIALKARVLPPAHAALPGGYDFARDAFFAGLGGVGNALGRVEIM 223
>gi|323137199|ref|ZP_08072278.1| ComEC/Rec2-related protein [Methylocystis sp. ATCC 49242]
gi|322397557|gb|EFY00080.1| ComEC/Rec2-related protein [Methylocystis sp. ATCC 49242]
Length = 757
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/394 (13%), Positives = 122/394 (30%), Gaps = 41/394 (10%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY---FYSIPKMIYS 61
+ P F +F++ I+ + + +
Sbjct: 366 DRASLSMRNLALAAFFIIAFEPEALLG-ASFQLSFAAVAALIAVYEWRGDYLGRSRARPV 424
Query: 62 SESHNTWTWKKISSIKQSF--LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
S + ++ + +++ + F+ FH + Y L+ N L +
Sbjct: 425 GPSMRGRLAELREALVERLVHGPGAALLATLCATSATASFMANDFHELSPYVLVGNPLTL 484
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-RIPET 178
I+ F +P LI +L LD + + G+D++I++A I+ A
Sbjct: 485 AIIEFFAVPCALIGAVLYPFGLDGFVWRYLKIGIDLVIYLAGLIASAPGASLHVKAFAPW 544
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
+ V + + L V +T + + I + ++ L DL + G+ A +
Sbjct: 545 AIVFLALAVLSAVLWRTWS--LRATAIPLALVGLLGAKNGTGFDLAVPPTGDSAAFRAAS 602
Query: 239 TL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI 297
P F QW + + + +
Sbjct: 603 GEIALLGKRPSVFASEQWL-----------------------RADADSRAAADAGAGVAC 639
Query: 298 KKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQ 357
CVG IV ++ + C + I++T + C ++I L +
Sbjct: 640 DDLGCVGRLFDGRIVALVNERGAFLEDCARAAIIVT--PLHAPEGCAAPIVIDRRKLVET 697
Query: 358 GSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
G++ + + + + + + + PW++
Sbjct: 698 GAISLRLKGEKIEWTRARGV------DEDRPWSQ 725
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 76/255 (29%), Gaps = 12/255 (4%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
T+ F A + ARL PP+ A PG +DF +Y+ + +G +++ +
Sbjct: 169 TRGDPSFSAGDFVALKARLMPPARAALPGGYDFARDAYFARLGGVGNALGRIEVMPPPDP 228
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP-ILS 123
+ + +R G A A + + G +++ I
Sbjct: 229 APISLRFFAAIDRARNALALRVYRTIDGDAGAIAAAMVTGKRDFLSGNAKDLIRRAGIFH 288
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH--NEFC--------IG 173
+ I + ++ I + M+ L + I + +G
Sbjct: 289 IITISGMQMTLVAGIFFVGFRRLLAMSQTLALNYPIKKWAAGLAILGAILYDIATGSRVG 348
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
I++ +L ++R++ I S L + L+A
Sbjct: 349 TERALVMTLIMLVAVLFDRASLSMRNLALAAF-FIIAFEPEALLGASFQLSFAAVAALIA 407
Query: 234 LVDKNTLISNYSNPP 248
+ + S
Sbjct: 408 VYEWRGDYLGRSRAR 422
>gi|326387884|ref|ZP_08209490.1| ComEC/Rec2-related protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326207930|gb|EGD58741.1| ComEC/Rec2-related protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 738
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/389 (14%), Positives = 118/389 (30%), Gaps = 37/389 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ L P P +F + + AI ++ +
Sbjct: 335 RDPLSLRLLAVAAFFVMLFWPEAVLGP-----SFQMSFASVMAIIAVHNAAPVKRFLAKR 389
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + G + + HFH +YG AN++AIP+ +F
Sbjct: 390 DEGRLMRLLR-----ETAMLLASGVVIELTLMPIALFHFHRAGIYGAFANLVAIPLTTFT 444
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTIV 184
+PA +A++L + L + V L+ ++ +AH + + +P F ++
Sbjct: 445 TMPAIALALVLDLAGLGAPAWWVTGKSLEALLWLAHITATMPGAVTMMPTMPGWIFGIML 504
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD-KNTLISN 243
L + +R G + + + + +PD+LIS G V L L+
Sbjct: 505 AGLLWLGLWSGRVRLWGLLPVALGC---AVYAGERAPDVLISGDGRHVGLTGLGPDLVVL 561
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ + + + + R + L + + V
Sbjct: 562 RPGRGGYAREALLESAGMSGDVRLLEDWPGARCNVAFCMVRLARGGRSFALLFARGTGLV 621
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
D + +C SDI++ R L +L++ G + I
Sbjct: 622 -------------DIDQLEAACAASDIVVADRRLPQAC-RPRLLKADLGLLERTGGMTID 667
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
++ A PW +
Sbjct: 668 LVSGRIH--------TVAENRGEHPWVQQ 688
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 12/141 (8%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
I ARL PPS P PG +DF +++++GI A G ++ + +
Sbjct: 152 VGAMIAARARLVPPSPPMLPGGYDFAKTAWFQGIGATGSILGDVTVLSPAGPVPS----- 206
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIPILSFV 125
+ ++ + + A +G A A+ I + ++L+I L
Sbjct: 207 LRRVQDALARHVLAQLGGSPGAIAAALASGDRGAIAREDEDAMRDAGLTHLLSISGLHVS 266
Query: 126 VIPAGLIAILLMILSLDNIPF 146
+ AG+ + + +L L
Sbjct: 267 AVIAGVYFLTIRLLGLFPWIA 287
>gi|16126147|ref|NP_420711.1| ComEC/Rec2 family protein [Caulobacter crescentus CB15]
gi|221234918|ref|YP_002517354.1| DNA translocation competence protein ComA [Caulobacter crescentus
NA1000]
gi|13423355|gb|AAK23879.1| ComEC/Rec2 family protein [Caulobacter crescentus CB15]
gi|220964090|gb|ACL95446.1| DNA translocation competence protein ComA [Caulobacter crescentus
NA1000]
Length = 725
Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats.
Identities = 59/356 (16%), Positives = 119/356 (33%), Gaps = 37/356 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + +A+ E W + +I I A++ + +
Sbjct: 390 GFQMSFAATAALVALAESWPKPVR-ELSTPWWIQGPQAIATWLAVSIAASL--VAGLATA 446
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F ++HF+ + V+GL AN+ P+ SFV++P I +L L V WG+D+++
Sbjct: 447 PFAMQHFNRVAVWGLPANLAVSPLSSFVIMPFLAIGTVLEPFGLSAPFLAVAGWGIDVML 506
Query: 158 HIAHRISVAHNEFCIGR-IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
++A S AH I P + + +++ + +R IG+ + + + +P
Sbjct: 507 NVAGLFSEAHGAQHIVASAPPQVLLVAFLGLMVLCLWRGRLRWIGAPL----ALAVALWP 562
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
PD I+ G A+ N + ++ F W
Sbjct: 563 RPTPPDAWIAADGATAAVRSGNAAVLLRTDAKRFGAELWARRRGLEPTTWNLYG------ 616
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
+++C + + C LSD+++
Sbjct: 617 --------------CDRWICAPGLGAPVRLSLAWS-RRTPDAETLSGLCVLSDVVVVRGP 661
Query: 337 DIN--TKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
LC ++L+T + + G+ E+ I+ + PW+
Sbjct: 662 APARTPPLCADTVLLTGDDFARYGAAELYRRSDGW------RIVWAQPLRGVRPWS 711
Score = 37.5 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 59/188 (31%), Gaps = 10/188 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW-KK 72
I A L PP PA PG +DF +++ I +G+ + +
Sbjct: 175 GQAIGLRAMLGPPPPPAAPGAYDFARDAWFDSIGGVGFAIGDIGEVTLDQPPLRLRLVMA 234
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKH-------FHCIPVYGLIANILAIPILSFV 125
+++ + + A +G + + H +A+IL+I L
Sbjct: 235 VNAFRWDLAQRLLARMGPTSGGIGAAMVTGHEAWISETQTEAMRASGLAHILSISGLHMA 294
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++ + ++ M + P+ + I A +SV G P I
Sbjct: 295 IVGGFVFVVVRM--GVAAWPWLALRAPGKKIAASAGLVSVLGYLIVSGAPPPAERAAITA 352
Query: 186 EFLLMVFC 193
+
Sbjct: 353 SVAFLAIL 360
>gi|188584408|ref|YP_001927853.1| ComEC/Rec2-related protein [Methylobacterium populi BJ001]
gi|179347906|gb|ACB83318.1| ComEC/Rec2-related protein [Methylobacterium populi BJ001]
Length = 753
Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats.
Identities = 51/352 (14%), Positives = 112/352 (31%), Gaps = 32/352 (9%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P +F + ++ + + + + S + + +
Sbjct: 388 REPEALLGP-----SFQMSFGAVAGLIACAPLLDGRVFRTDSPSRIARAASWLATAVVGT 442
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + + + F HF + +GL+ N L +P++S V+PA ++ +L +LD
Sbjct: 443 LATTL--VAQIATAPFATYHFQTMQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDR 500
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+ +M + ++ I+ I+ + +P + + + ++ + + +
Sbjct: 501 PVWWLMGLAVRGMLDISAWIAGFGQANVV--LPAFGTGALALLAVALLVATLPVSRLRLL 558
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPF 263
+ + L D+ I G A+ K+ + PP FI QW A
Sbjct: 559 ALLPAGLGLALAASPTRYDIYIDRDGAGAAVRGKDGRLVVLGRPPGFILEQWLKADGDGR 618
Query: 264 HEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
+ + C V ++ K
Sbjct: 619 RPESVAGAVGPRC---------------------DRLGCTILALDGRAVALVTDKRAFPE 657
Query: 324 SCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
C +DILI+ +R C L+ L QG+ I + + +
Sbjct: 658 DCARADILISRLRAPP--GCAAPLIADRSFLAAQGATAIRLGATGPEVASTR 707
Score = 40.2 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ARL PP A PG +DF +Y++GI A+G ++ E
Sbjct: 181 GDAIRATARLLPPPEAARPGGYDFARDAYFRGIGAVGSLVGKVEVGPPPE 230
>gi|254466483|ref|ZP_05079894.1| competence protein [Rhodobacterales bacterium Y4I]
gi|206687391|gb|EDZ47873.1| competence protein [Rhodobacterales bacterium Y4I]
Length = 689
Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats.
Identities = 61/389 (15%), Positives = 134/389 (34%), Gaps = 46/389 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A I L P PG F +F++ +
Sbjct: 329 VLLNRRAITLRAVALAALIVLLRRPESLLSPG-FQMSFAA---------TAALVAVFAAV 378
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + A+ + F HF+ +P YGL+AN+LA+P+
Sbjct: 379 RDGGVPLGPGWLRPV------AALVISSAVAGAATAPFAAAHFNTLPHYGLLANLLAVPV 432
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS-F 180
+ VVIPA ++A+ L+ L+ I VM WG+D I+ +A +S P+++
Sbjct: 433 MGTVVIPAAVLALCLLPAGLEGIGLTVMRWGMDWILAVARTVSGFEGAVSHVTAPDSAVL 492
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ V + + + L+ + + P ++I+ G L+ +++
Sbjct: 493 PLFASGMVFAVIWQGRL---RLAGLLPAAAALWIWSGAERPPVIIASSGGLIGVMEAEGR 549
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + F W + + ++ +
Sbjct: 550 ALSRAKGQGFTAGIWLENDGDAATQPEAAARWKVR----------------------DGA 587
Query: 301 FCVGCHRSDVIVGVLKRKDMIRL-SCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
V +V ++++++ +C+ DI+++ C L++TP IL++ GS
Sbjct: 588 LPVWHGAGVRLVHAPGKRELLQASNCKEGDIVVSAAAGAAPGGC---LVLTPGILRQTGS 644
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFP 388
+ + + + P
Sbjct: 645 IAVRPDGRLLTARAATGMRLWSGWQPEGP 673
Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 86/230 (37%), Gaps = 9/230 (3%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+T + P + A L PP GPA PG FDF +++K + +GY +P ++
Sbjct: 139 ISLTGQDAVPPPGALVMTTAHLLPPQGPAEPGGFDFRRHAWFKQLGGLGYTR-VPVLLAG 197
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS---IFLIKHFHCIPVYGLIANILA 118
+ + + + Q I G + +A + + + +A++LA
Sbjct: 198 APGDSVPVERLRREMAQHLQQRIPGETGGFAAALTAGDRSGVGEQTLAALRKSNLAHLLA 257
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPF--GVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
I L ++ + A + ++ L + + IA + + +
Sbjct: 258 ISGLHMGLLTGFVFAAVRVLFCLVPPLALRWPVRKLAALAALIAGAGYLLLSGGNVATER 317
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
V +++ +L+ + ++ + I++L SP +S
Sbjct: 318 AFVMVAVMLGAVLL---NRRAITLRAVALAALIVLLRRPESLLSPGFQMS 364
>gi|23012427|ref|ZP_00052514.1| COG0658: Predicted membrane metal-binding protein [Magnetospirillum
magnetotacticum MS-1]
Length = 742
Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats.
Identities = 51/365 (13%), Positives = 117/365 (32%), Gaps = 33/365 (9%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P P +F + ++ + + + + S + + +
Sbjct: 388 REPEALLGP-----SFQMSFGAVAGLIACAPLLDGRLFRTGSPSRLGRAASWLATTVVGT 442
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + + + F HF + +G++ N L +P++S VV+P+ ++ +L +LD
Sbjct: 443 LATTL--VAQIATAPFATYHFQTVQPFGIVGNALTLPLVSLVVMPSAVLGMLAYPFALDR 500
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+ +M + ++ I+ I+ + E + + LL+ + + +
Sbjct: 501 PVWWLMGLAVRGMLEISGWIAQFGRATLVLPAFEPGAMIWLAAALLIA--TLPVSRLRLL 558
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPF 263
+ I L D+ I G A+ ++ ++ PP F+ QW A
Sbjct: 559 ALLPAGIGLALAAVPTRFDIYIDRDGAGAAVRGRDGRLAVLGRPPGFVLEQWLKADGDGR 618
Query: 264 HEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
+ + + C V ++ K
Sbjct: 619 RPESASGEAGPRC---------------------DRLGCTLVAVDGRAVALVADKRAFPE 657
Query: 324 SCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIE 383
C +DILI+ +R C ++ L +G+ I + + + + A
Sbjct: 658 DCARADILISRLRAPP--GCAAPVIADRSFLAARGAAAIRLGAGRVEIVGARDTGR-AKP 714
Query: 384 NLHFP 388
P
Sbjct: 715 WQPRP 719
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 64/189 (33%), Gaps = 15/189 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK-MIYSSESHNTWTWKK 72
I ARL PP A PG +DF +Y++GI A+G + ++ +
Sbjct: 181 GDAIRATARLLPPPEAARPGGYDFARDAYFRGIGAVGSLVGKVELRPATAPLPLSLRLAA 240
Query: 73 ISSIKQSFLNEIRANIGTYGSASASI--------FLIKHFHCIPVYGLIANILAIPILSF 124
++ L + + + + + + + I ++++I L
Sbjct: 241 AVDAARNALTRRITDAIGGQAGAVAAALVTGKRGLISAETNDVLRAAGIYHVVSISGLHM 300
Query: 125 VVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
V+ + + L+ + P +A G ++ + + + + R +
Sbjct: 301 VLAAGVVFWLVRAGLALVPILALTWPIKKIAAG-AAMLGVTAYCAFSGWDVAAERSLIMT 359
Query: 180 FVTIVVEFL 188
V + +
Sbjct: 360 LVMLGAILV 368
>gi|222475345|ref|YP_002563762.1| hypothetical protein AMF_669 [Anaplasma marginale str. Florida]
gi|255003327|ref|ZP_05278291.1| hypothetical protein AmarPR_03661 [Anaplasma marginale str. Puerto
Rico]
gi|222419483|gb|ACM49506.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 748
Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats.
Identities = 64/392 (16%), Positives = 134/392 (34%), Gaps = 60/392 (15%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ K + + I L P P F +F++ + G +
Sbjct: 354 VDKPNSVLRSISLAASIILLLTPETILLPS-FQMSFAAVVALAGSCGVSRVVSA------ 406
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S+ + + S + + +++ HF+ V G+++NI+AIP+ +
Sbjct: 407 ----------GSVVRYIT--AATSGSLIASIATAPYVVYHFNYFSVVGVVSNIIAIPLTA 454
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVT 182
FVVIP GL+ ++ L + + + +I++IAH + + IP S +
Sbjct: 455 FVVIPLGLVYVITDCLLSGALVASPLEASVGLILYIAHYAAKVEWLAPTVRSIPPASVLF 514
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT--- 239
+ + L + + R I ++ ++ +L +PD+L G VA+ + +
Sbjct: 515 MTLGLLAFSWWRGTARIILGLLFALSGFLLALA--YKTPDVLYGVGG--VAVKEGDGQLY 570
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ F +S W P + + +
Sbjct: 571 FAMRRGSTRGFSYSAWARENGQPKIINGGYFGQGKKLICMAG------------------ 612
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDIN-TKLCNVSLLITPEILQKQG 358
C+ R V + + I C +D++I T C+ IT + ++K G
Sbjct: 613 -GCIYDSR----VIISCDTEFILQRCSEADLVIHTGSGPRYPAPCSHVPHITYDDIRKLG 667
Query: 359 SLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ +++ S + + PW
Sbjct: 668 AHYVSLSGSSVKVESARTR---------RPWH 690
>gi|307295057|ref|ZP_07574899.1| ComEC/Rec2-related protein [Sphingobium chlorophenolicum L-1]
gi|306879531|gb|EFN10749.1| ComEC/Rec2-related protein [Sphingobium chlorophenolicum L-1]
Length = 690
Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats.
Identities = 52/371 (14%), Positives = 115/371 (30%), Gaps = 41/371 (11%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P P F +F++ ++ + + + + + +
Sbjct: 344 PEALVGPS-FQMSFAAVVALVA-----------LGEHPRFRAFLLARDEGMGRRIARNLA 391
Query: 86 ANI--GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ G + + HFH V G +AN++ IP+ + VV+P A+L +
Sbjct: 392 GMLATGLAVELVLAPIALFHFHKAGVLGSVANLVVIPLTTLVVMPLEAAALLFDLCGWGA 451
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFVTIVVEFLLMVFCKTNIRHIGS 202
+ + A LD+++ +AH ++ + + + +F I+ L + ++ R G
Sbjct: 452 PFWWLTARALDLLLLVAHGVASSPWAVVLAPVQSGLAFGLILFGMLWCLLWRSRWRWAGL 511
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFIFSQWKSALIT 261
+ + + ++ P P +LIS G VA+ + ++ +L
Sbjct: 512 MPVTAGVTMILATPA---PAILISGDGRHVAIRTAQGGMAMLRERAGHYMREAMTESLGH 568
Query: 262 PFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMI 321
+ + + L + + ++
Sbjct: 569 DGMPEAMAALPQARCSPDLCAVRLRGGGRNWNLLLTRSGMRI-------------DPAIL 615
Query: 322 RLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSA 381
C +DI+++ R L L G L I + + K +
Sbjct: 616 ARDCARADIVVSDRRLPRVC-RPRWLKADRAYLAATGGLAIDLDHGVIRSVKAR------ 668
Query: 382 IENLHFPWTKH 392
N PW
Sbjct: 669 --NDEHPWMTR 677
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/314 (13%), Positives = 92/314 (29%), Gaps = 16/314 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I ARL PP+ P+ PG +DF +Y+ GI A G ++ + + +
Sbjct: 145 GAIIRFRARLMPPAPPSLPGGYDFARRAYFDGIGATGRALQPISVLRPATAEPPLRARLF 204
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ I + + + + GL A++L+I L + A +I
Sbjct: 205 AHILERAPGQGAGIAAALATGDQGAIAEADAAAMRRSGL-AHLLSISGLHVTALIAAVIF 263
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ + +++L + W L ++ ++ G T + +L
Sbjct: 264 LSMRVMALSRRA--ALDWPLMLVAACGGALAGIGYTLLTGAEVPTVRSCVAALLVLGGLA 321
Query: 194 KTNIRHIGSIMIGITIIILFTFPYS---FSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
++ + +L +P + S + + LVAL P F
Sbjct: 322 MGRDAITLRLVAAGALAVLLLWPEALVGPSFQMSFAAVVALVAL----------GEHPRF 371
Query: 251 IFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
A ++ + + K + +
Sbjct: 372 RAFLLARDEGMGRRIARNLAGMLATGLAVELVLAPIALFHFHKAGVLGSVANLVVIPLTT 431
Query: 311 IVGVLKRKDMIRLS 324
+V + +
Sbjct: 432 LVVMPLEAAALLFD 445
>gi|163795625|ref|ZP_02189591.1| anthranilate phosphoribosyltransferase [alpha proteobacterium
BAL199]
gi|159179224|gb|EDP63757.1| anthranilate phosphoribosyltransferase [alpha proteobacterium
BAL199]
Length = 641
Score = 159 bits (401), Expect = 9e-37, Method: Composition-based stats.
Identities = 65/366 (17%), Positives = 130/366 (35%), Gaps = 38/366 (10%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P P F +F++ ++ P S W + +
Sbjct: 308 PESLTGPS-FQLSFAAVTALVAVWEVKSGRP-GFRRSRRFGAVRWVLLYLLG-------V 358
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
S S + HF +PV G +AN++A+P+ +FV +PAG+ +++ M L+ P
Sbjct: 359 VATSVVASLVTSPIVTHHFQQVPVMGAVANVVAVPVTAFVTMPAGVASLVAMPFGLEAGP 418
Query: 146 FGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+M WG+D + A+ S + + + + L + +T IR +G +
Sbjct: 419 LTLMGWGIDATLWAANAASDGPLTAIGVAALGTGPLAVLALGGLWLAIWRTAIRWLGVAI 478
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPF 263
+G I PD LIS G L A+ V+ + + F+ W+
Sbjct: 479 VGGAGIWSVL---DRPPDALISADGKLSAVHVEGQGWLVSQERGSGFVRDAWRRWWG--- 532
Query: 264 HEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
++S ++ ++ +F C CV + +I+ V +
Sbjct: 533 ------------GSPEASFRQADQAEPSERFAC-DGLGCVVQV-NGMILAVPASPEAAIE 578
Query: 324 SCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIE 383
C +D+++T + + ++I L++ G+ + + +
Sbjct: 579 DCGYADLIVTGVHFRRSCP-GSVIVIDRSDLRRNGAHAVWLSANGARIR------SVGAD 631
Query: 384 NLHFPW 389
PW
Sbjct: 632 RGDRPW 637
Score = 56.0 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 86/258 (33%), Gaps = 21/258 (8%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN-TWTWK 71
I ARL PPS P PG FDF ++++GI A+G+ ++ + W+
Sbjct: 99 IGDRIRMRARLRPPSAPVAPGAFDFQRDAFFRGIGAVGFAVGPVSVLGRGSARWDGRAWE 158
Query: 72 KISSIKQSFLNEIRANIGTYGSASASI-----------FLIKHFHCIPVYGLIANILAIP 120
+ I+ + IRA + + A+ F +A++LAI
Sbjct: 159 AVDGIRDAVTRRIRAGLSDPAGSIAAAMLVGDRAGIDEPTAAAFRQTG----LAHLLAIS 214
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIGRIPETS 179
L ++ + A++ ++L P + + A + + +P
Sbjct: 215 GLHMGLVAGTVFAVVR--VALAACPAIALGRPIKKWAAVAAFAAAGLYLLLAGAPVPTQR 272
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY--SFSPDLLISEKGNLVALVDK 237
+ L V + + ++L S L + LVA+ +
Sbjct: 273 AFLMTGLVLGAVLLDREAVSLHMVAWAAAAVLLMAPESLTGPSFQLSFAAVTALVAVWEV 332
Query: 238 NTLISNYSNPPSFIFSQW 255
+ + F +W
Sbjct: 333 KSGRPGFRRSRRFGAVRW 350
>gi|67458412|ref|YP_246036.1| ComEC/Rec2-related protein [Rickettsia felis URRWXCal2]
gi|67003945|gb|AAY60871.1| ComEC/Rec2-related protein [Rickettsia felis URRWXCal2]
Length = 404
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 102/257 (39%), Gaps = 15/257 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + I P P F +F + ++ ++ +I ++
Sbjct: 83 PLRSLAIAAFIILSLNPEYIFHPS-FQLSFIAVLSLVAGFEFYLKNSWLIGENKGIFG-- 139
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++K + I + S +I F Y + AN++ +PI SF ++P
Sbjct: 140 -----AVKFYMASNIYS--SFLASIITVPVVINQFFIFSTYSVPANLIVVPITSFFLMPL 192
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFL 188
L+++ ++ D+ +M + +DIII A + + + G I S + + F
Sbjct: 193 ALLSLPFTMIGFDSYILKLMRFFIDIIIKSAAYFNSLPRSVWYFGYITNFSILLFLFGFF 252
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS-NP 247
+ KT+ R +G +++ I+ I +F YS P+L+ V + DK+ + Y+
Sbjct: 253 WICIWKTSWRLLGLVIMIISFIFMF---YSPKPELIFDTNHMAVGIKDKDGKLIIYADKI 309
Query: 248 PSFIFSQWKSALITPFH 264
P+F + W +
Sbjct: 310 PTFNRTYWANWFGQKDS 326
>gi|254995154|ref|ZP_05277344.1| hypothetical protein AmarM_04131 [Anaplasma marginale str.
Mississippi]
Length = 748
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 63/392 (16%), Positives = 134/392 (34%), Gaps = 60/392 (15%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ K + + + L P P F +F++ + G +
Sbjct: 354 VDKPNSVLRSISLAASVILLLTPETILLPS-FQMSFAAVVALAGSCGVSRVVSA------ 406
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S+ + + S + + +++ HF+ V G+++NI+AIP+ +
Sbjct: 407 ----------GSVVRYIT--AATSGSLIASIATAPYVVYHFNYFSVVGVVSNIIAIPLTA 454
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVT 182
FVVIP GL+ ++ L + + + +I++IAH + + IP S +
Sbjct: 455 FVVIPLGLVYVITDCLLSGALVASPLEASVGLILYIAHYAAKVEWLAPTVRSIPPASVLF 514
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT--- 239
+ + L + + R I ++ ++ +L +PD+L G VA+ + +
Sbjct: 515 MTLGLLAFSWWRGTARIILGLLFVLSGFLLALA--YKTPDVLYGVGG--VAVKEGDGQLY 570
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ F +S W P + + +
Sbjct: 571 FAMRRGSTRGFSYSAWARENGQPKIINGGYFGQGKKLICMAG------------------ 612
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDIN-TKLCNVSLLITPEILQKQG 358
C+ R V + + I C +D++I T C+ IT + ++K G
Sbjct: 613 -GCIYDSR----VIISCDTEFILQRCSEADLVIHTGSGPRYPAPCSHVPHITYDDIRKLG 667
Query: 359 SLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ +++ S + + PW
Sbjct: 668 AHYVSLSGSSVKVESARTR---------RPWH 690
>gi|260576321|ref|ZP_05844312.1| ComEC/Rec2-related protein [Rhodobacter sp. SW2]
gi|259021392|gb|EEW24697.1| ComEC/Rec2-related protein [Rhodobacter sp. SW2]
Length = 704
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 54/366 (14%), Positives = 110/366 (30%), Gaps = 41/366 (11%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + + L P PG F +F++ ++ G
Sbjct: 349 DRRALSLRSVAISAVVLLLLQPESLLEPG-FQMSFAATTALVAGFGAL--------EGGV 399
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + L+ + + + + F+ I YG AN+L +P++
Sbjct: 400 LHGRVPRWFLPVFTLVLSSLL------AGLATAPYGAATFNRIADYGFFANLLTVPVMGA 453
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVTI 183
VV+PAG IA LL + L ++P VM G I+ ++ I+ +P I
Sbjct: 454 VVMPAGAIAALLAPIGLQDLPLWVMGRGSAWILWVSFWIAGMEGSVTAVPVPGPWVIPLI 513
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ L ++ + +R G + + + L + PD LIS G LV L+ +
Sbjct: 514 TLGGLWLILWRGWLRGAGLVPMALA---LVLWAGVQRPDALISADGGLVGLMGPEGRAVS 570
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
F W + ++ + + +
Sbjct: 571 SPRGAGFAAKSWLEDDGDLAEQVDAAERAGFSGDKGARSFVL-------------GPWRA 617
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
+ G + + +I +L G L +
Sbjct: 618 VVLKGKAAAGAVPAACAGAD---------LVVVAAEVAAPEGCEVIDQTLLSASGGLALW 668
Query: 364 IIPPSN 369
+ +
Sbjct: 669 LTDEGS 674
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 91/248 (36%), Gaps = 14/248 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ L PP GP PG FDF +++ + AIGY S ++ ++I
Sbjct: 167 GQVVMLTGMLGPPEGPVEPGGFDFQRMAWFDRLGAIGYTASPVLLLERP----ADGEQRI 222
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVV 126
+ + N I A + A +S + + + + +A++LAI ++
Sbjct: 223 NRWRTRLSNAIMAEVPGDAGAFSSGVMTGDRSGLSLEAVVDLRKSSLAHLLAISGMNMAF 282
Query: 127 IPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTIV 184
+ A + A++ L+L + + + L ++ + + + + + V ++
Sbjct: 283 LTAFVFALVRYGLALLPVLALRLNSKKLAAVVALGVAWVYLQLSGANVATERAFVTVVVM 342
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+ +L ++R + +I + +++ + + LVA +
Sbjct: 343 LGAVLFDRRALSLRSV-AISAVVLLLLQPESLLEPGFQMSFAATTALVAGFGALEGGVLH 401
Query: 245 SNPPSFIF 252
P +
Sbjct: 402 GRVPRWFL 409
>gi|56416977|ref|YP_154051.1| hypothetical protein AM884 [Anaplasma marginale str. St. Maries]
gi|56388209|gb|AAV86796.1| hypothetical protein AM884 [Anaplasma marginale str. St. Maries]
Length = 748
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/392 (16%), Positives = 134/392 (34%), Gaps = 60/392 (15%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ K + + + L P P F +F++ + G +
Sbjct: 354 VDKPNSVLRSISLGASVILLLTPETILLPS-FQMSFAAVVALAGSCGVSRVVSAR----- 407
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S+ + + S + + +++ HF+ V G+++NI+AIP+ +
Sbjct: 408 -----------SVVRYIT--AATSGSLIASIATAPYVVYHFNYFSVVGVVSNIIAIPLTA 454
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVT 182
FVVIP GL+ ++ L + + + +I++IAH + + IP S +
Sbjct: 455 FVVIPLGLVYVITDCLLSGALVASPLEASVGLILYIAHYAAKVEWLAPTVRSIPPASVLF 514
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT--- 239
+ + L + + R I ++ ++ +L +PD+L G VA+ + +
Sbjct: 515 MTLGLLAFSWWRGTARIILGLLFALSGFLLALA--YKTPDVLYGVGG--VAVKEGDGQLY 570
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ F +S W P + + +
Sbjct: 571 FAMRRGSTRGFSYSAWARENGQPKIINGGYFGQGKKLICMAG------------------ 612
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDIN-TKLCNVSLLITPEILQKQG 358
C+ R V + + I C +D++I T C+ IT + ++K G
Sbjct: 613 -GCIYDSR----VIISCDTEFILQRCSEADLVIHTGSGPRYPAPCSHVPHITYDDIRKLG 667
Query: 359 SLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ +++ S + + PW
Sbjct: 668 AHYVSLSGSSVKVESARTR---------RPWH 690
>gi|148284699|ref|YP_001248789.1| ComEC/Rec2 family protein [Orientia tsutsugamushi str. Boryong]
gi|146740138|emb|CAM80336.1| ComEC/Rec2 family protein [Orientia tsutsugamushi str. Boryong]
Length = 682
Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats.
Identities = 73/366 (19%), Positives = 139/366 (37%), Gaps = 45/366 (12%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
++ I + P + I L P P +F + + ++ Y + +I
Sbjct: 338 VVLIKRGVVPLRSVGLAAIIILLFNPEYIMHP-----SFQLSFIAVISLISCYELQSVIQ 392
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + +S I+ F + I + + S + + +I HF+ P Y ++AN+L +P
Sbjct: 393 LYKFNVDQK-DILSKIQLFFESNIYS--SAFASIATAPIVIYHFYSFPNYSVLANLLIVP 449
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETS 179
+ +F V+P L+++LLM +++N + G+D+II IA IS G I + S
Sbjct: 450 LTAFWVMPLTLVSLLLMPFNIENYSLLLAGQGVDVIIKIAKIISTLPYAVTYFGHIDDVS 509
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ + FL +V R I + I II + PDL+ + + + + + N+
Sbjct: 510 LLLYLFGFLWVVIWHKCWR---MIGVVIIIIAIIRAALVSKPDLVFNGELTALGIKNANS 566
Query: 240 --LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI 297
I SN P F + W + E L +
Sbjct: 567 KFEIHASSNIPDFFLNYWSNWYGQDEILFRDSAIETLNHR-------------------- 606
Query: 298 KKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQ 357
S IV + + C +D++I ++ + + +I IL K
Sbjct: 607 ------IITNSGKIVSIRFKN----TECVPADLII-SVIPNDKCKYTTAKIIDAAILNKS 655
Query: 358 GSLEIT 363
+E+
Sbjct: 656 NIVEVY 661
>gi|254420656|ref|ZP_05034380.1| Competence protein [Brevundimonas sp. BAL3]
gi|196186833|gb|EDX81809.1| Competence protein [Brevundimonas sp. BAL3]
Length = 698
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 51/393 (12%), Positives = 118/393 (30%), Gaps = 38/393 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ + P PG F +F++ ++ + + + I +
Sbjct: 332 ILLDRQAVTMHGLAVAAFVVLAIQPEAIVTPG-FQMSFAATAALVALVEVWPQRMREISA 390
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + F ++HF+ +YGL+AN+ P+
Sbjct: 391 PWPIVAVQ-------RFGGWLTAAVAASVVAGLATGPFAMQHFNRTAMYGLLANLGTAPV 443
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSF 180
FV++PA + L L L V WG+D+++ I + + P+
Sbjct: 444 ADFVLMPALALGAALEPLGLGGPFLAVAGWGVDLMLAIGAWTAGLPGAVQTVASAPDYVL 503
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ L + + +R +G + + +P + +PDL I + G A +
Sbjct: 504 PMAFLGVLFVCLWQGRLRWLGLPLAA----AVLVWPRAPTPDLWIGDGGTNAAFHHQAQA 559
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ +F W + P + C ++
Sbjct: 560 VVIRPGVRAFAVDLWSRRRGLTTADRP------------------EAGWTCDRSSCRPET 601
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDIN-TKLCNVSLLITPEILQKQGS 359
G + + C+ + ++ C+ L++ + G+
Sbjct: 602 PEAGPVAL-WWGREAPDAEQMADLCRAASVVSVRAAVAALPASCDGRLVLDGVDFTRGGA 660
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+E+ + +A PW +
Sbjct: 661 VELWRD-----GVDRWKAVWTADVRGDRPWARQ 688
Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 10/225 (4%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L T + DP + A L+PP PA PG +DF +++++G+ I + + +
Sbjct: 136 LRATVRGDPPRPGEAVRLFAILNPPPAPASPGAYDFGRNAFFQGMGGIAFALGETRRLDL 195
Query: 62 SESHNTWTWK-KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLI 113
+ + ++S + + I A +G A+ H I +
Sbjct: 196 PSAPWRLRLEMAVNSARYALAERIVARLGERTGGIAAAMTTSHETWISQEDMDVMRDSGL 255
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
A+IL++ L ++ + L + P+ + + +A +V G
Sbjct: 256 AHILSVSGLHMAIVGGFVFFAAR--LGVAAWPWLALRVPGKKVAALAGLTAVGAYLVVSG 313
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
P I + + ++L P +
Sbjct: 314 APPPAERAAITASIAFLAILLDRQAVTMHGLAVAAFVVLAIQPEA 358
>gi|84687234|ref|ZP_01015115.1| Putative Competence protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664822|gb|EAQ11305.1| Putative Competence protein [Rhodobacterales bacterium HTCC2654]
Length = 700
Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 55/391 (14%), Positives = 123/391 (31%), Gaps = 49/391 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A I + P F +F++ + G + +
Sbjct: 335 ILVGRRALTLRAVAVAALILLILKPESLVE-AGFQMSFAATTALVFVFGALRDVQRGKLP 393
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + F F+ + YGLIAN++++P+
Sbjct: 394 KWARPVFAV---------------VLSSLVAGLATAPFSAAIFNRVAHYGLIANVVSVPV 438
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-RIPETSF 180
+ +V+P ++A LL L L I +M W ++ I+ +A +++ P+
Sbjct: 439 MGTLVMPLAVLAALLAPLGLSWIALDLMRWPIEWILWVAKKVAALDGAVGHVIAPPDAVM 498
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
I + L ++ + + + L + + PD+LIS G+L+ +
Sbjct: 499 PMIALGGLAVI---LLRGAGRAAGAVVVVAALALWTQATRPDVLISPSGSLIGAMTAEGR 555
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ F W + + Q L +
Sbjct: 556 ALTKARGEGFAARSWLENDGDSTDQESAAARMAQATDPQFDLPGLTL------------- 602
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+V D + +C ++I + + ++ L + G+L
Sbjct: 603 ---------RLVSGRGAADRLEGACASEALVIFAAK-PLDRYPEGCNMLDRAALARTGAL 652
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
IT+ + A + + PWT+
Sbjct: 653 AITLTADGP------RVTSVAQVSGNRPWTR 677
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 15/233 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I + LS P GP PG FDF ++++ I A+GY + +E I
Sbjct: 157 GMRIAVTSHLSGPEGPVEPGGFDFRRMAWFRSIGAVGYTTKPALALAPAERAL-----PI 211
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSFVV 126
++ + ++A I A A+ + +A++LAI L +
Sbjct: 212 HRLRAAISAAVQAEIPGEAGAFAAAITTGDRSAMGQETVEALRASNLAHLLAISGLHMGL 271
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ + L + L+L M + +A + G + + +V
Sbjct: 272 LVGFVFGTLRLGLALTPGVGVSMDVR-KVAAVVALAAGAFYLAMSGGAVSTSRAFVMVAV 330
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF--SPDLLISEKGNLVALVDK 237
L+ + + ++ + I+++ + + LV +
Sbjct: 331 MLVAILVGRRALTLRAVAVAALILLILKPESLVEAGFQMSFAATTALVFVFGA 383
>gi|170748439|ref|YP_001754699.1| ComEC/Rec2-related protein [Methylobacterium radiotolerans JCM
2831]
gi|170654961|gb|ACB24016.1| ComEC/Rec2-related protein [Methylobacterium radiotolerans JCM
2831]
Length = 760
Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 49/363 (13%), Positives = 115/363 (31%), Gaps = 33/363 (9%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P G P +F + ++ + + + + + +
Sbjct: 387 REPEGLLGP-----SFQMSFGAVAGLIACARLIDGRLFVRPGAGRIGRLVGTGLSAITGT 441
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + + + F HF + +GL+ N L +P++S V+PA +I L +LD
Sbjct: 442 LATTL--VAQVATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVIGCLAYPFALDR 499
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ +M + ++ I+ I+ + + + LL + +R +
Sbjct: 500 PVWWLMGRAVAGMLVISDWIAGFERASLVLPAFGAAALTLLTAGLLLATLPASRLRWLAV 559
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+ + L DL + +G A+ + ++ +P F+ QW A
Sbjct: 560 PPVLLG---LVLAARPDRYDLYVDRQGAGAAVRGPDGRLAALGSPSGFVLEQWLKADGDG 616
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
A + + + C V +++ +
Sbjct: 617 RRPAALIVRSGSGR--------------------CDRLGCTARLPDGRAVALVRDRRAFP 656
Query: 323 LSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAI 382
C + +LIT + T C L+I ++L +G++ + + ++
Sbjct: 657 EDCARAAVLITFLAAPPT--CTGPLVIDRQVLAARGAVALRADGDGFAARFARDDGRAVP 714
Query: 383 ENL 385
Sbjct: 715 WRP 717
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 2 LSITKKYDPFP-AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ + P P + ARL PP A PG +DF +Y++GI A+G +
Sbjct: 167 VRVSFRKTPIPRPGDVVAATARLLPPPEAARPGGYDFARDAYFQGIGAVGSLVGAVTVRA 226
Query: 61 SSESHN 66
SE
Sbjct: 227 PSEPPP 232
>gi|58039725|ref|YP_191689.1| putative DNA uptake protein [Gluconobacter oxydans 621H]
gi|58002139|gb|AAW61033.1| Putative DNA uptake protein [Gluconobacter oxydans 621H]
Length = 742
Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats.
Identities = 52/390 (13%), Positives = 126/390 (32%), Gaps = 54/390 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ + + + + L P F +F++ I+ G +
Sbjct: 383 RRVLSMRSLSIVALLILLVSPVSVVD-VSFQMSFAAVMGLIAGYGALREPLMRLRGEGEW 441
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++ + + HF + + ++AN++A+P+ +
Sbjct: 442 YRVVASHCAALV---------LTSLMAGLATLPVSMAHFGALQPWFVLANLVAVPLAAVW 492
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIV 184
++P GL+A++ M + +M G+ I+ +A R++ + +P + ++
Sbjct: 493 IMPVGLLALVAMPFHAEAPFLKLMGMGIRIVQTLAERVAAFPMAHQPVPAMPGWGLLLVM 552
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS-N 243
+ + K + G + I + + ++ P PD+L+S L+A+ + L+ +
Sbjct: 553 LGLCFLCLWKGRVCLAGLLPIAVGLASIWLAP---KPDVLVSPDAGLMAVRRQGVLLVGS 609
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+S+ W+ AL P P C+ +
Sbjct: 610 HSSLQRRTLEDWQQALALPTAPLPSD--------------------------CLSGPCRM 643
Query: 304 GCHRSDVIVGVLKRKDMIR----LSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
V++ V D C+ + I+ K C I + + G+
Sbjct: 644 SLGAQTVLLRVRDASDGNTLPTMEQCEGVSLFISA--SPARKGCPDVPSIDRFSVWRDGA 701
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ + W
Sbjct: 702 YSVFAGDPLK-------VVSDRSWRGNRLW 724
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 80/247 (32%), Gaps = 19/247 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+TI L P P++PG D +++ G++ GY + + +
Sbjct: 201 GSTIRLRTMLRAPPPPSWPGGRDLQREAWFSGLAGSGYALGPASLSGAPSHQ-----SWL 255
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLI-------KHFHCIPVYGLIANILAIPILSFVV 126
S++++ A + +A A+ L +H +A++LA+ L +
Sbjct: 256 ESLRETVALRANAALSDQTAAIAATLLAGEAGSIDQHTRETFSASGLAHLLAVAGLHLGL 315
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ A +I L L I + + W I +A ++ A G + +
Sbjct: 316 VMAAVIVTLRC--GLAAIEYVALRWPCRQIAAVAGLLAGAGYVMLTGAHLPSLRALGMAS 373
Query: 187 FLLMVFCKTNIRHIGS----IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + R + I+ + +++ S + + L+A
Sbjct: 374 IVTLAIVSGR-RVLSMRSLSIVALLILLVSPVSVVDVSFQMSFAAVMGLIAGYGALREPL 432
Query: 243 NYSNPPS 249
Sbjct: 433 MRLRGEG 439
>gi|167646747|ref|YP_001684410.1| ComEC/Rec2-like protein [Caulobacter sp. K31]
gi|167349177|gb|ABZ71912.1| ComEC/Rec2-related protein [Caulobacter sp. K31]
Length = 726
Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats.
Identities = 55/390 (14%), Positives = 125/390 (32%), Gaps = 39/390 (10%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + L P PG F +F++ ++ + + I +
Sbjct: 369 DRQAITLHGLAIAALVILLVQPESAGAPG-FQMSFAATAALVALAEAWPRPVREISAPW- 426
Query: 65 HNTWTWKKISSIKQSF-LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
I +I+ S + + F ++HF+ + V+GL AN+ P+ S
Sbjct: 427 -------WIRAIQGSMSWLAVSIGASFVAGMATGPFAMQHFNRVAVWGLPANLAVAPLSS 479
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI-PETSFVT 182
FV++P I L L + WG+ ++ IA + A + P +
Sbjct: 480 FVIMPFLAIGAALEPFGLGGPFLAIAGWGIGAMMWIADGFASAGGAQRLVASGPPFTLAL 539
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
V +L+ + +R +G+ + + + +P + PD+ I+ G+ A+ +
Sbjct: 540 AFVGLMLLCLWRGRLRWLGAPL----ALAVALWPRAAPPDVWIAPDGSTAAVRQGREAVL 595
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ F W S + + C+ +
Sbjct: 596 LRPDARRFGAELWSRRRGLAAP----------------SDTKPSALYACDRRSCVPTAAS 639
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDI-NTKLCNVSLLITPEILQKQGSLE 361
+ + + C ++I++ C +++ + G++E
Sbjct: 640 PVALALSWSKAAPDAEALAAM-CVEAEIVVLRGAAPVTPPACRDRIVLDADDFAVGGAVE 698
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ +I+ + PWT+
Sbjct: 699 LYRRGGDW------WIVWAQPLRGVRPWTR 722
Score = 37.1 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 12/209 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK-MIYSSESHNTWTWKK 72
I A L PP PA PG +DF +++ G+ +G+ + ++
Sbjct: 182 GQAIRLRAMLGPPPPPAAPGAYDFARDAWFHGVGGVGFAIGESRPVVLDPPPWRLRAAMA 241
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKH-------FHCIPVYGLIANILAIPILSFV 125
+++ + + I A +G A+ + H +A+IL+I L
Sbjct: 242 VNAFRWRLASRIVARMGAERGGVAAAMVTGHEAWITQEQTNAMRASGLAHILSISGLHMA 301
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET--SFVTI 183
++ L ++ L + P+ + + +A ++ G P + +T
Sbjct: 302 IVGGFLFGLVR--LGIAAWPWAALRVPGKKVAALAGLAAIGTYLVISGAPPPALRAAITA 359
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
V F ++F + I G + + I+++
Sbjct: 360 TVAFAAILFDRQAITLHGLAIAALVILLV 388
>gi|295689579|ref|YP_003593272.1| comEc/Rec2-like protein [Caulobacter segnis ATCC 21756]
gi|295431482|gb|ADG10654.1| ComEC/Rec2-related protein [Caulobacter segnis ATCC 21756]
Length = 722
Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats.
Identities = 59/357 (16%), Positives = 112/357 (31%), Gaps = 37/357 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + +A+ S W + I + +
Sbjct: 390 GFQMSFAATAALVALAEGWPRPVKEISTPWWIRWPQAGI---TWLAASVAASLVAGLATA 446
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F ++HF+ + V+GL AN+ P+ SFV++P I LL L V WG+D ++
Sbjct: 447 PFAMQHFNRVAVWGLPANLAVAPLSSFVIMPFLAIGTLLEPFGLGGPFLAVAGWGVDAMV 506
Query: 158 HIAHRISVAHNEFCIGR-IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+A+ + AH I P V + +++ K +R IG+ M + + +P
Sbjct: 507 DVANGFADAHGAQRIVASAPPQVLVIAFLGLMILCLWKGRLRWIGAPM----ALAVALWP 562
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
PD I+ G A+ + + ++ F W
Sbjct: 563 RPVPPDAWIAADGATAAVRSGDAAVLLRTDAKRFGAELWARRRGLTPATWSLYA------ 616
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
K +C + + C S++++
Sbjct: 617 --------------CDKRICTPALGAPVRLSLAWS-RGTPDAETLSGLCVNSEVVVIRGP 661
Query: 337 DI--NTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
LC ++L+T E + G+ E+ I+ + PW++
Sbjct: 662 APVRTPPLCEDTVLLTAEDFSQGGAAELYHRGDGW------RIVWAQPLRGERPWSR 712
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 10/188 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW-KK 72
I A L PP PA PG +DF +++ I +G+ +
Sbjct: 175 GQAIRLKAMLGPPPPPAAPGSYDFARDAWFDSIGGVGFVIGEMEPASLDPPPLRLRLAMA 234
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSFV 125
+++ + S I +G + + H I +A+IL+I L
Sbjct: 235 VNAFRWSLAQRILDRMGPTSGGIGAAMVTGHEAWITQEQTDAMRASGLAHILSISGLHMA 294
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++ + + L + P+ + I A ++V G P I
Sbjct: 295 IVGGFVFGAVR--LGVAAWPWLALRAPGKKIAAGAGLVAVLGYLVISGAPPPAERAAITA 352
Query: 186 EFLLMVFC 193
+
Sbjct: 353 SVAFLAIL 360
>gi|220921516|ref|YP_002496817.1| ComEC/Rec2-like protein [Methylobacterium nodulans ORS 2060]
gi|219946122|gb|ACL56514.1| ComEC/Rec2-related protein [Methylobacterium nodulans ORS 2060]
Length = 736
Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats.
Identities = 57/354 (16%), Positives = 110/354 (31%), Gaps = 36/354 (10%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P G P +F + ++ + + + +
Sbjct: 388 REPEGLLGP-----SFQMSFAAVAGLIA--CARLLDGRLLRAEGAGPLGRALAWGAAALA 440
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
A+ + F HF + +G++ N L +P++S VV+PA ++ IL +LD
Sbjct: 441 GTLATTLVAQAATAPFATYHFQTLQPFGVVGNALTLPLVSAVVMPAAVLGILAYPFALDR 500
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ M + ++ IA I + + + + + LL+ + +R +G
Sbjct: 501 PVWWAMGLAVRGMLDIAAWIRGFDHATLVLPAFGAGALTLLTLGLLLLTLPASRLRWLGL 560
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+ + PDL + G A+ + ++ PP+F QW A
Sbjct: 561 VPALAGLAAAA---RPERPDLYVDRDGAGAAVRVADGRLATLGRPPAFGLEQWLKADGRS 617
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
+ + E CV R+ V + + K
Sbjct: 618 RDDPGLARAERC-----------------------DAVGCVATARNGWRVALARDKRAFE 654
Query: 323 LSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
C +DI+I R C L+I L G+ + P +
Sbjct: 655 ADCARADIVIA--RTTAPAACAARLVIDRAFLAAHGATTVRFAPEGPVVTTARR 706
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ P +I ARL PP A PG +DF +Y++GI A+G ++ +
Sbjct: 172 RGSAPLRPGDSITAKARLLPPPEAARPGGYDFARDAYFRGIGAVGSLLGPVTVLRDAPEP 231
Query: 66 NTWTWKKISSI 76
+ ++I
Sbjct: 232 PPLRLRIAAAI 242
>gi|332185896|ref|ZP_08387643.1| comEC/Rec2-related domain protein [Sphingomonas sp. S17]
gi|332014254|gb|EGI56312.1| comEC/Rec2-related domain protein [Sphingomonas sp. S17]
Length = 702
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 66/384 (17%), Positives = 128/384 (33%), Gaps = 39/384 (10%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
I L P +F + I+AI + P M +H W W
Sbjct: 353 LRLVAAGALIVLLFRPEALMG-----ASFQLSFAAITAIIALHEHPVMRRWFGAHPDWRW 407
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ G A+ I HFH +YG ANI+AIP +F+ +P
Sbjct: 408 SIVRQ------GGALLVTGLVVEAALMPIAIFHFHKAGLYGAFANIVAIPWTTFIAMPIE 461
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLL 189
++A+L L L + ++ W L ++ +AH ++ + +F T V L
Sbjct: 462 MLALLFEPLGLAGPLWHLLGWALGALLALAHYVAALPGAAIALPVASCWAFATAVGGGLW 521
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ +T R +G +I + + + P PDL+++ G A+ + +
Sbjct: 522 LALWRTRARWMGVPLILMGSVEMLMAPS---PDLIVTGDGRHAAIRTDHGMALLRERAGD 578
Query: 250 FIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSD 309
++ + + + + ++ R+ + + +G RS
Sbjct: 579 YMRMTLAEMSGSQAEL--VALSDHGRCGPDVCVTQLRRAGR---------LWRIGATRSG 627
Query: 310 VIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSN 369
+ + + C+ DI+I R L + L+K G + + P
Sbjct: 628 YNLPWVS----LIALCRRVDIMIADRRLPEACQ-PRWLKLDAPTLRKAGGATLWLDP--- 679
Query: 370 DNDKVKFIIKSAIENLHFPWTKHR 393
+ PW + +
Sbjct: 680 -----PRVETVNKPGDGHPWRRFK 698
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 53/131 (40%), Gaps = 1/131 (0%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I RL PP+GP PG +DF +++++GI A G ++ ++ +S+ + +
Sbjct: 169 GAVIRLRVRLMPPAGPVAPGGYDFARAAWFQGIGATGRGFAPITILRASQQEDGLRQRLS 228
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
I + + + GL A++L++ L + ++
Sbjct: 229 RRITERVAGSAGGIAAALATGDVGAIGQADAEAMRRAGL-AHLLSVSGLHITAVVGIVMT 287
Query: 134 ILLMILSLDNI 144
I + +L+L
Sbjct: 288 ITIRLLALWPW 298
>gi|197105226|ref|YP_002130603.1| ComEC/Rec2 family protein [Phenylobacterium zucineum HLK1]
gi|196478646|gb|ACG78174.1| ComEC/Rec2 family protein [Phenylobacterium zucineum HLK1]
Length = 714
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 60/390 (15%), Positives = 117/390 (30%), Gaps = 38/390 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ A L P PG F +F++ +
Sbjct: 353 DRQAISLHALALAAMGVLLLQPEAVTEPG-FQMSFAA---------TAALVALAEGWPRP 402
Query: 65 HNTWTWKKISSIKQSF--LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ Q+ + + F I+HF+ + +GL+AN+ PI
Sbjct: 403 IREIEAPWWIRLPQAVVTWTAASLAVSFVAGLATGPFAIQHFNRVSTWGLLANLAVAPIS 462
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFV 181
+F+++PA + L L IP ++++ IA + A + P +
Sbjct: 463 TFLLMPALALGAALAPFGLGRIPLEAAGLAIELMNRIAAAAASAPMAQTLVPSAPAWTLA 522
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
V L + + +R G + + + P +PDL IS G VA+ + +
Sbjct: 523 ASFVGLLFVCLWRGRLRWAGLPL----ALSVLWAPRPATPDLWISADGAAVAVREGREAV 578
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
+ F W + + E ++ C +
Sbjct: 579 LLRPDVKLFGAELWARRRGLTPLTSEAERDERFDCD---------------RWSCAPGAG 623
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
+ + + + C ++++I D + C L++T + GS E
Sbjct: 624 APMRVSAAWNLRRPLKPGRLDALCGSAEVVIL-RNDFRPESCGAPLVLTGADFRAGGSAE 682
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ I S PWT
Sbjct: 683 LWRRSDG-----SWRIAWSQDLRGRRPWTW 707
Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP--KMIYSSESHNTWTWK 71
+ +A L+PP PA PG +DF ++++ + +G P +
Sbjct: 165 GEGVRVLAILNPPPPPASPGAYDFARDAFFESVGGVGLALRPPEWWTPDTVAPWRLRLTM 224
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSF 124
++++++ + I +G A+ H IP +A+I++I L
Sbjct: 225 RVNAVRWALTRRIVETLGPESGGLAAAMTTGHEAFIPPEQVENLRVSGLAHIISISGLHM 284
Query: 125 VVI 127
++
Sbjct: 285 AIV 287
>gi|114327479|ref|YP_744636.1| DNA translocation competence protein ComA [Granulibacter
bethesdensis CGDNIH1]
gi|114315653|gb|ABI61713.1| DNA translocation competence protein ComA [Granulibacter
bethesdensis CGDNIH1]
Length = 710
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 59/389 (15%), Positives = 125/389 (32%), Gaps = 45/389 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ + L P +F + + A+ Y
Sbjct: 341 LFLGRRALSMRGLAIAAALIVLIWPYEVTG-----VSFQMSFAAVMALAAGYEA------ 389
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + A +++ + I HF + +Y + N++A+P+
Sbjct: 390 ----LGPWLASLAGRRVLHHLTAVALTSLLAGTASAPYGIYHFGQLQLYFVATNLIAVPL 445
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH-RISVAHNEFCIGRIPETSF 180
++F V+PAGL+A+ LM L LD F VM G+ +I+ +A ++ + +P
Sbjct: 446 MAFWVMPAGLLAMALMPLGLDRPVFVVMGIGIRLILTVAKLVAALPAAVLAVPPMPGWGL 505
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
I + + + +R G ++ I ++ + DLLIS +VA+ +
Sbjct: 506 FMISAGLIWLCLWRGRVRLCGVPVMVAGIASVWL---TVHADLLISADARMVAVKAGPRV 562
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + W++ V + S
Sbjct: 563 FAFDKGSSPLLTEAWQAYWGVKDFTPLSVAGRLATHMARCGE-----------------S 605
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
C+ LK + CQ + + + C +I+ ++++GS+
Sbjct: 606 GCLVTPVPGAPRVFLKTGEG-TEICQPGALAVILDGW--SSQCRDQPVISLSQIREEGSI 662
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ P + PW
Sbjct: 663 AVWFRPGRISVLTDRAW------RGDRPW 685
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 82/239 (34%), Gaps = 15/239 (6%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + I A + PP PA+PG D +++ I A G+ + + S
Sbjct: 152 DGDHTSLQSGDRISVRALIRPPPWPAYPGAMDRQRDAFFSRIGAFGFALAP---VSHLVS 208
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANIL 117
+++ +++ +R + + A A+ L IP +A++L
Sbjct: 209 RQDAVSIRLARVREMIAEHVRTALPGHEGAVATALLTGDTASIPQSIRILFRDTGLAHLL 268
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
AI L ++ + A+ +L+ W I + +S G
Sbjct: 269 AIAGLHIAIVMGTIFAVTRWLLTRSEYMALF--WPCRQIAAVISLLSGIAYAVLTGLHVP 326
Query: 178 --TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF-PYSFSPDLLISEKGNLVA 233
S V ++ L + + + G + I++++ + S + + L A
Sbjct: 327 IIRSAVMAMIACLALFLGRRALSMRGLAIAAALIVLIWPYEVTGVSFQMSFAAVMALAA 385
>gi|329850632|ref|ZP_08265477.1| comEC/Rec2-related domain protein [Asticcacaulis biprosthecum C19]
gi|328840947|gb|EGF90518.1| comEC/Rec2-related domain protein [Asticcacaulis biprosthecum C19]
Length = 537
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 57/388 (14%), Positives = 115/388 (29%), Gaps = 37/388 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ A I P PG F + +A+ K S
Sbjct: 177 DRRALSLRALAIAALIVIALTPEVVIQPG-----FQMSFCATAALLALAETVKPDIREIS 231
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W +++ + ++ + + + F I +F+ VY L++N+L PI +F
Sbjct: 232 VPLWVRAFQAALNGA---KLSLVASFVATLATTPFAIAYFNRFSVYSLLSNLLEAPITAF 288
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTI 183
VV+P + L L I + GL +I IA S + P
Sbjct: 289 VVMPCLALGTALAATPLGWIFLRIAGGGLWLIKEIAAWTSDLPYAVVTLSSAPGFVLAVA 348
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ + + + +R G ++ + +P PD+ I +G A+ +
Sbjct: 349 TMGLIWVCLMRGKVRWAGLVV----ASSIVWWPRVAPPDIWIDPQGGNAAVRLADGAYVL 404
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
F F QW + D K + ++ + K
Sbjct: 405 RPKVRQFGFEQWTQHYGL-RTLDEAARDRDYLCKGYGCVPLPSNPVKVGFWFGNK----- 458
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEI 362
+ C S +++ + C+ I+ ++ G++E+
Sbjct: 459 -----------PPNDKRLAELCAASTLVVMRNPVGDWPATCSTVNRISAGDFRRLGAMEL 507
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWT 390
T + + W+
Sbjct: 508 TRNEMGWAIK------AAQPLRGNRYWS 529
>gi|269958610|ref|YP_003328397.1| putative competence protein [Anaplasma centrale str. Israel]
gi|269848439|gb|ACZ49083.1| putative competence protein [Anaplasma centrale str. Israel]
Length = 721
Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 63/395 (15%), Positives = 145/395 (36%), Gaps = 61/395 (15%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I K + + + I L P P +F + + A+ + K+I +
Sbjct: 342 IMIDKPNNGLRSISLAAFIILLFTPEAILLP-----SFQMSFAAVIALAASCDVSKVISA 396
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S+ + ++ S + + +++ HF+ V G+I+NI+AIP+
Sbjct: 397 ------------CSVVRYITAAAAGSL--IASIATAPYVVYHFNYFSVVGVISNIVAIPL 442
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSF 180
+FVVIP GL+ +++ LS+ ++ V+ + +I+ +A + + IP ++
Sbjct: 443 TAFVVIPLGLVYVVMDYLSIGSLVSRVLEMSVGLILCVARYGAKVEWLAPTVRSIPPSAV 502
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + + L + + +R + ++ ++ ++L +PD+L G VA+ + +
Sbjct: 503 LLMTLGLLAFSWGRGTLRIVSGLLFTLSGLLLAIT--YKTPDILFGING--VAVKEGDGK 558
Query: 241 ISNYSN----PPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLC 296
+ F +S W + +
Sbjct: 559 LHFAMRKGNSARGFAYSAWARENGQTRIVNEEYFGRGKKLICVAG--------------- 603
Query: 297 IKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI-TTIRDINTKLCNVSLLITPEILQ 355
C R V + + I C +D++I T + LC+ I+ + ++
Sbjct: 604 ----GCTYGSR----VLISCDTEFIVQHCSEADLVIHTQLGVHYPSLCSHVPHISYDDVK 655
Query: 356 KQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
++G+ ++ S + + PW
Sbjct: 656 ERGAHYVSFSGSSIKVESAR---------TGRPWH 681
>gi|119386426|ref|YP_917481.1| ComEC/Rec2-related protein [Paracoccus denitrificans PD1222]
gi|119377021|gb|ABL71785.1| ComEC/Rec2-related protein [Paracoccus denitrificans PD1222]
Length = 717
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 59/395 (14%), Positives = 118/395 (29%), Gaps = 47/395 (11%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ I + P PG F +F++ I + + ++
Sbjct: 361 DRRAVSLRTIAVAALIVLVLNPEALTEPG-FQMSFAATAALILMQEPWARLAPLLPWWTR 419
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + HF + YGL+AN+L +P++
Sbjct: 420 P----------------VLMLFVSSFVAGMVTAPIAAAHFGRMSQYGLLANMLVVPVVGT 463
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTI 183
+V+P G+ A LL L L +M G D ++ +A IS + P I
Sbjct: 464 LVMPGGVFAALLAPLGLAQPALWLMGLGTDWMLTVAQWISDLDGAVTLLPAAPRAVLPLI 523
Query: 184 VVEFLLMVFC-------KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
+ ++ V + + + + + PD+LIS +G+ A++
Sbjct: 524 GIGAMMAVLGPIPGGAHRPVLLWRRGTGLALLAAAALLWVGDRRPDVLISAQGDAAAVLT 583
Query: 237 KNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLC 296
I + SF W +A +A + Q + R+ +
Sbjct: 584 PAGRIPSKPRGGSFAVENWLAADGDAADQAGAAARPLWQGTPSDRWAVLDRAGMRLRI-- 641
Query: 297 IKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD-INTKLCNVSLLITPEILQ 355
+ C+ IL+ I ++ + L++ E L
Sbjct: 642 -------------RHLTGKGAAQDAAAHCREGGILVANIPLSMSAEARKECLVLDSEYLG 688
Query: 356 KQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
K+G+ I + ++ W
Sbjct: 689 KRGATAIFLTEGGAS------LVSVDQPGSGRIWH 717
Score = 40.2 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ A L PP+GP+ PG FDF ++++ + A+GY + + T +
Sbjct: 176 GQRVMLTAHLGPPAGPSEPGGFDFRRMAWFQRLGAVGYARAPVMTVELPADGGTLALHR- 234
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLI-------KHFHCIPVYGLIANILAIPILSFVV 126
I+ S ++ IG A A+ + + + I + +I++I L +
Sbjct: 235 --IRMSLSEAMQDRIGGQSGAVAAALMTGDRSGIAERTNQIMRDSNLYHIVSISGLHMSM 292
Query: 127 IPAGLIAIL 135
+ + A L
Sbjct: 293 LAGFVYAAL 301
>gi|46201588|ref|ZP_00208160.1| COG0658: Predicted membrane metal-binding protein [Magnetospirillum
magnetotacticum MS-1]
Length = 710
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 92/247 (37%), Gaps = 13/247 (5%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ L P P +F + + A+ Y +
Sbjct: 334 LDRRALSMRLVAWAAVAILLWQPDELIGP-----SFQMSFAAVVAMIAAYE--SLTPRQT 386
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+++I + + + +++ I HF+ V+ + AN++A+P+
Sbjct: 387 QWRAAHPGWLAAIGLYVFGTVVTTL--IAGFATAVYGIYHFNRFAVWSVAANMIAVPLTG 444
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVT 182
F V+P L+ LL+ L+ + M WG++ + +A ++ + + +P + V
Sbjct: 445 FWVMPWALVMFLLLPFGLEALALVPMGWGVEGVNWVAVWVASWPSSAVTLPILPLWAMVV 504
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + + R G + + + L + ++ PDLL+ +G+ +A+ + +
Sbjct: 505 FTLGGCWLCLWRGRWRWWGLVPM---MAALASMAFARPPDLLVDGRGDGMAVRSADGTLL 561
Query: 243 NYSNPPS 249
Sbjct: 562 LNGKGGE 568
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 83/261 (31%), Gaps = 17/261 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--IYSSESHNTWTW 70
+ A L PP PA PG FDF ++++ AIG ++ ++
Sbjct: 146 VGDRVRVRAMLMPPPQPAMPGAFDFARFAWFRQFGAIGTALGPVEVTEPGAATGWRADLT 205
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIPILS 123
I+ I+ + I A + A + I +A+IL+I L
Sbjct: 206 TTINEIRHAITTRIMAVLPGDRGAVTAALTTGDQMPISAPMMQAYRDSGLAHILSISGLH 265
Query: 124 FVVIPAGLIA---ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ + LL + L + + + W + I A ++ +P
Sbjct: 266 ITMAAGLVFVGLRTLLALFPLVALRYPIKKWAAALAIVFAGFYTLLAGS----PVPAQRS 321
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ LL V + + I+L+ P +S +VA++
Sbjct: 322 FFMTGLVLLAVLLDRRALSMRLVAWAAVAILLWQPDELIGPSFQMSF-AAVVAMIAAYES 380
Query: 241 ISNYSNPPSFIFSQWKSALIT 261
++ W +A+
Sbjct: 381 LTPRQTQWRAAHPGWLAAIGL 401
>gi|157827689|ref|YP_001496753.1| ComEC/Rec2 family protein [Rickettsia bellii OSU 85-389]
gi|157802993|gb|ABV79716.1| ComEC/Rec2 family protein [Rickettsia bellii OSU 85-389]
Length = 656
Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 95/258 (36%), Gaps = 15/258 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + I P P F +F + ++ ++ ++ +
Sbjct: 336 PIRSLAIAAFIILSLNPEYIFHPS-FQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFG-- 392
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+IK ++ I + S + +I F Y + N++A+P++SF ++P
Sbjct: 393 -----AIKFYTISNIYS--SFLASIITAPVVINQFFIFSTYSVPTNLIAVPVMSFFLMPL 445
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFL 188
L+++ ++ D+ ++ + ++III AH + + G I S + + F
Sbjct: 446 ALLSLPFTMIGFDSYILKIIGFFIEIIIRSAHYFNNLPGSVWYFGYITNFSILLFLFGFF 505
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI-SNYSNP 247
+ KT R G ++ ++ I + YS P+L+ + + +K +
Sbjct: 506 WICIWKTTWRLFGLAIMAVSFIFML---YSPKPELIFDASNMAIGVKNKQGKLEIYADKM 562
Query: 248 PSFIFSQWKSALITPFHE 265
+F W +
Sbjct: 563 ATFNRIYWANWFGQKDSI 580
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 2 LSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+SI KKY I +A+L P PG +DF F +Y I A GY S PK+I
Sbjct: 135 ISIPKKYLQKVRVNDYIALLAKLYKPQNSILPGGYDFGFYAYLADIGANGYAMSEPKIIA 194
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+E+ I I+ N + +G+ A+ L+
Sbjct: 195 RNETTID---SFIYKIRIFIYNNLINKLGSDKGNFAAAILL 232
>gi|296117483|ref|ZP_06836070.1| putative DNA uptake protein [Gluconacetobacter hansenii ATCC 23769]
gi|295976004|gb|EFG82795.1| putative DNA uptake protein [Gluconacetobacter hansenii ATCC 23769]
Length = 814
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 54/391 (13%), Positives = 127/391 (32%), Gaps = 45/391 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPA-FPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + G L P P + ++ ++ +++ E
Sbjct: 444 RRVLSLRSLALAMGGMLLLEPGEMLELPM--QMSAAAVMALVAGFEVCAVPLRLLRDGEY 501
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ + + + HF + + ++AN++A+P+ +
Sbjct: 502 AWQRMIGRVGH---------LSLASLLAGLACLPVGMAHFADVGAWFVLANLIAVPLAAL 552
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTI 183
++P + A++LM + LD++ M WG ++I +AH ++ + ++P
Sbjct: 553 WIMPCAMGALVLMPVGLDSLALVPMGWGNAVVIWLAHHVAAWPGAHVGVPQMPMWGLGLY 612
Query: 184 VVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ R G + I I + T +PD++I +G ++A+VD L+
Sbjct: 613 FAGLCWLCLWTRPTWRICGVMPIA---IAMVTPWMVRAPDVIIPAQGRMLAVVDGPRLLV 669
Query: 243 N-YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
+ SF+ W L + + + + + C
Sbjct: 670 APKGHVDSFVLRDWVRVL-----------------DRRVVIVDDDMTTPDGRLTCQAGM- 711
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT---TIRDINTKLCNVSLLITPEILQKQG 358
R + + R SC D ++ +R + C + L + G
Sbjct: 712 -CVLARGGHRIMMRLRDGTAAASCAGMDGVVILSGALRAVGQGACTDVTPVDYLTLWRSG 770
Query: 359 SLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + + + ++ A PW
Sbjct: 771 AQALYLTSHHGVVVRSDRQVRGA-----RPW 796
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 67/226 (29%), Gaps = 13/226 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I A L PP P PG +D +++ GI + M + + ++
Sbjct: 260 GMWITVRALLRPPMPPDLPGGYDAQRRAWFAGIGGSARALDVAVMTAGTAGAWSV---RL 316
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIPILSFVV 126
++ + + A A L + +A++LA+ L +
Sbjct: 317 GRVRARIAQRVMDVLPDQRGAMAVTLLTGGSGGLSARTRADFADSGLAHLLAVAGLHIGI 376
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ IA++ +L+L + W + +A + G ++
Sbjct: 377 VMGLGIAVVRFVLALSERAS--LWWPCRQVAAVAGLVLGCGYVLLTGAHLPAQRGLVMAA 434
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+ R + + + + + +L + V
Sbjct: 435 VATLAILTGR-RVLSLRSLALAMGGMLLLEPGEMLELPMQMSAAAV 479
>gi|83858369|ref|ZP_00951891.1| ComEC/Rec2 family protein [Oceanicaulis alexandrii HTCC2633]
gi|83853192|gb|EAP91044.1| ComEC/Rec2 family protein [Oceanicaulis alexandrii HTCC2633]
Length = 680
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 62/370 (16%), Positives = 120/370 (32%), Gaps = 47/370 (12%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG F +FS+ I++ + S S ++ +
Sbjct: 350 PESVIEPG-FQMSFSAVAALIASFDAYKRWRPEGGFSTSLIGKVKDALAGL--------- 399
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
+ A+ F I HF + YGLIAN+LA+P+ +F V+PAG A++ L L+
Sbjct: 400 SATSLIAGAATGAFAIFHFQRMAAYGLIANLLAMPVFTFWVMPAGGAALVFSPLGLERPF 459
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIM 204
VM GL ++ IA+ S + + V + F +V +R G +
Sbjct: 460 LWVMDQGLRRVLDIAYWASSLDGAVVGANAADPALVALYGLGFACLVIGLGWMRVTGGAL 519
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT--LISNYSNPPSFIFSQWKSALITP 262
I I I + P ++I++ G ++A + + F +
Sbjct: 520 IAIAIGLFMV---QTPPQMMITDGGVVLARFEGGGEEFAVSDRRRGRFDARVFLQRAGVS 576
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
+ C G +++ V + +
Sbjct: 577 STPERAALR-------------------------CDTLGCTGRTAEGLLLAVTGSAESLE 611
Query: 323 LSCQLSDILITTIRDINTKLCN-VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSA 381
C +D+++ + +L++ + G +E + V+ A
Sbjct: 612 SDCAYADLIVFDGEVSAWRKRRCRALVLDDAARAELGGMEFWVQD----GQVVRMRSAQA 667
Query: 382 IENLHFPWTK 391
+ W +
Sbjct: 668 MRR-ERLWVR 676
Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 64/194 (32%), Gaps = 13/194 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I D F I+ ARL+ PS P G +D ++++ I GY S +
Sbjct: 133 VRIRAGLDGFEPGDAIQVRARLARPSAPVAAGGYDPARAAWFDQIGLTGYAISDLERAEI 192
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIA 114
S ++ + +++ A A+ L + +
Sbjct: 193 GASVPPGLI--LARFRWRLSEHLQSRTDPRTGAVAAALLTGERARVSREDAEALRLSGLG 250
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA----WGLDIIIHIAHRISVAHNEF 170
+ILAI L + G ++ + ++ L +I + + ++
Sbjct: 251 HILAISGLHMALFAGGAYWLIRLGFAMWEPWARAHDPRKPAALGALIAASLYLVISGAAV 310
Query: 171 CIGRIPETSFVTIV 184
R +FV ++
Sbjct: 311 STQRAYIMAFVVLM 324
>gi|294677884|ref|YP_003578499.1| competence protein [Rhodobacter capsulatus SB 1003]
gi|294476704|gb|ADE86092.1| competence protein [Rhodobacter capsulatus SB 1003]
Length = 717
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 55/389 (14%), Positives = 111/389 (28%), Gaps = 49/389 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ P PG F +F++ I
Sbjct: 354 ILVDRRALSLHTVALAAIFLLFLWPEALTGPG-FQMSFAATVALIL-------------- 398
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
W + + + HF + YG++AN+LA+P+
Sbjct: 399 --MAAPWAAHYHRLPVVLRPVIMLVLTSLIAGLATAPIAAAHFGRMSQYGMLANLLAVPV 456
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ VV+PAG++A +L L L +M G D ++ +A ++ P +
Sbjct: 457 MGIVVMPAGVLAAVLAPLGLAGPALWLMGLGTDWVLAVADFVAGLAGAQTFLPAPPGWVL 516
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
++ + + M+ + ++ + + P LLI+ G LV L+
Sbjct: 517 PVLALAAGAA--VLSRGAFRAAMLALALVAFAGWGLAPRPALLIAPGGALVGLMTPEGRA 574
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
+ + P F W A + + K +
Sbjct: 575 LSKAAPS-FTAEGWLEADGDAVTPKEAMARAGFSGKRGVRQAD----------------- 616
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
R V + D + +C+ +++ L L + G+L
Sbjct: 617 --WQGRRLVHLSGKAALDNLENACRDGALVVLDTAAPRG-FTGDCRLYDRRSLARTGALS 673
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ + E WT
Sbjct: 674 FEVSGQIRRARE---------EAGQRLWT 693
Score = 40.2 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 24/229 (10%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ A LSPP+ P PG +DF ++++ G+ A+GY S +I E +
Sbjct: 174 GLRVATTAHLSPPAEPIAPGAWDFRRNAWFSGLGALGYTRSPVVVIAPPEQDWGLAAHRA 233
Query: 74 S-SIKQSFLNEIRA-------------NIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ + + I G + +A++ +H + + GL +LA
Sbjct: 234 RMRLSAAMQDRIGGQAGAVAAALMTGDRSGISEATNATLRASNLYHIVSISGLHMGMLAG 293
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+ + LI +I I V + ++ + + + +
Sbjct: 294 FVFGALRWGLALIGPFALIWPTKKIAAAVALAASTAYLWVSGGDIATQRAWIMTAVMLLA 353
Query: 180 FV----------TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ + L+ + G M + L
Sbjct: 354 ILVDRRALSLHTVALAAIFLLFLWPEALTGPGFQMSFAATVALILMAAP 402
>gi|158423824|ref|YP_001525116.1| ComEC/Rec2-related protein [Azorhizobium caulinodans ORS 571]
gi|158330713|dbj|BAF88198.1| ComEC/Rec2-related protein [Azorhizobium caulinodans ORS 571]
Length = 949
Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats.
Identities = 52/362 (14%), Positives = 124/362 (34%), Gaps = 32/362 (8%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG +F++ ++A + + + + +
Sbjct: 402 PESLLEPGT-QMSFAATLALVAAYEQWTGLRTRPAAGP------LVLRALARMGLFVAAL 454
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
+ A+ + + HF + + GL++N+ A+P + F+V+P GL+ +LL+ D I
Sbjct: 455 SMTSVVAGAATAPYAALHFQRLGIMGLLSNLAAMPAVEFLVMPFGLLGVLLLPFGWDFIA 514
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+ VM G+DI++ ++ ++ LL + + + ++
Sbjct: 515 WPVMGLGIDIMVKVSDVVAALPGADMRTDWVGAGTAAFATLALLALCLLRGLLRLAAVPC 574
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS-NPPSFIFSQWKSALITPFH 264
+ ++L P PD+LI+ G VA+ + +S + QW S P
Sbjct: 575 VVAALLLLGAP--PRPDVLIAANGQTVAVRGGDGRLSIAGARSSRLVAEQWLSKEADPRT 632
Query: 265 EAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS 324
+ C+ + ++++ + + +
Sbjct: 633 AEVPDLAQGFAC---------------------DARRCMAPLPDGTKIVLVRKAEALPAA 671
Query: 325 CQLSDILITT-IRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIE 383
C + +++T + + L TP+ + + G+L + P + + +
Sbjct: 672 CGEASLVVTAEVASTENISACAARLFTPQDMSRTGTLALFHRPRQAAGEPGTPHRVAGVP 731
Query: 384 NL 385
Sbjct: 732 QP 733
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/207 (16%), Positives = 74/207 (35%), Gaps = 12/207 (5%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI-- 59
LS+ + P A T + +ARL PP A PG +DF + +++GI A+G+ P++I
Sbjct: 182 LSVARGSAP-AAGTPVSVLARLLPPMEAALPGGYDFGRNIWFRGIDAVGFGLGRPRIIAL 240
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGL 112
+ + + ++Q+ IRA + + A ++ I
Sbjct: 241 AEPAPFSVRVGRLVDEVRQAVGARIRAVLSGTAADIAVALVVGDRASISPQVEESMRVSG 300
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+ ++L+I L ++ L ++ L P + + + +
Sbjct: 301 LTHVLSISGLHMAMVAGTLFFLVRG--GLAAFPPLALGFPIKSLAAATALAGSGVYLLLS 358
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRH 199
G ++ +L+
Sbjct: 359 GNDWPAQRSFWMLAIVLVGVIAGRAAL 385
>gi|114569947|ref|YP_756627.1| ComEC/Rec2-like protein [Maricaulis maris MCS10]
gi|114340409|gb|ABI65689.1| ComEC/Rec2-related protein [Maricaulis maris MCS10]
Length = 702
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 62/390 (15%), Positives = 129/390 (33%), Gaps = 46/390 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ + P PG F + +A+ + + S
Sbjct: 356 LKRRALSMHTLAIAVIAVLVLQPQAVITPG-----FQMSFSAAAALVAVARVWQQSRSGG 410
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + ++ + F HFH I +GL N+L +PI S
Sbjct: 411 DARGVLGQIRLFVAG------LSTTSLVAGSATAAFAAFHFHRIATFGLAGNLLVMPIFS 464
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVT 182
+V+PAG++ ++L+ + LD IPF M GL +++ +A ++ +
Sbjct: 465 LLVMPAGVLGLVLIPIGLDAIPFAAMEAGLSLMLDLAGHVANWPGAQRTVAAASGGVLAA 524
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ F+L++ + +R G +++ L + PDL ISE G ++A +
Sbjct: 525 FSIGFVLLILMRGPMRGAGGLVMAAA---LAVWTLMPQPDLFISENGLVLARDGHGEWVV 581
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ F + A + + C +
Sbjct: 582 SDRRTSRFAARVFLEARGV------------------AGPTPQRWQALCDPYGCSTRI-- 621
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLC-NVSLLITPEILQKQGSLE 361
+ ++V L C SD++++ R + + + P+ L GS
Sbjct: 622 -----NGLVVTRLDHVADWATDCARSDVIVSAARIPGWIVSQCQAAIFDPDRLATTGSQV 676
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
I + + + + PWT+
Sbjct: 677 IHLGANGIA-----RVQSARPPGVVRPWTQ 701
Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 36/241 (14%), Positives = 77/241 (31%), Gaps = 6/241 (2%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY--SSESHNTWTW 70
A I A L+ P A PG +DF F + + I A GY + + +
Sbjct: 172 AGDPIAIRAVLAAPRSSAVPGGYDFAFHAGFSDIVATGYAIAPAAAGPAVTGDRLARRIA 231
Query: 71 KKISSIKQSFLNEIRANIGTYGSASAS---IFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ +S+ + + G +A + + + ++LAI + ++
Sbjct: 232 RIRASLSAHIRDRMAPRPGALAAALLTGDRAHIAARDVEALRRAGLGHVLAISGMHMALL 291
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
G+ + ++LS + +A + + G IP + V
Sbjct: 292 AGGVFFAIRLLLSAVTPWARRHDPAIPA-AGMALVFAAGYLILSGGTIPTQRAFIMTVSV 350
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
L V K + ++ I + +++ +P +S + + S
Sbjct: 351 LGAVILKRRALSMHTLAIAVIAVLVLQPQAVITPGFQMSFSAAAALVAVARVWQQSRSGG 410
Query: 248 P 248
Sbjct: 411 D 411
>gi|298291807|ref|YP_003693746.1| ComEC/Rec2-related protein [Starkeya novella DSM 506]
gi|296928318|gb|ADH89127.1| ComEC/Rec2-related protein [Starkeya novella DSM 506]
Length = 793
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 58/371 (15%), Positives = 123/371 (33%), Gaps = 45/371 (12%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG +F++ I+A Y ++ + + +
Sbjct: 405 PWAVLDPGA-QMSFAATLALIAA----YERYGHFVTTPPGTAEDAVWLR--RPARYVAAL 457
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
+ + + HF + LIAN+ A+P +SF+V+PAGL+ +LM D+
Sbjct: 458 VLASLAAGLATAPYAAFHFQRLAPLSLIANLAAMPAVSFIVMPAGLVGAVLMPFGWDDRA 517
Query: 146 FGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ +M WG+D++ IA ++ + +P S V + + + + +T + +
Sbjct: 518 WRLMGWGIDLMRDIADFVARIPGADRGVSAMPMASLVLLSLALMALCLSRTRLILLA--- 574
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP-----PSFIFSQWKSAL 259
+ I+ L+ PDL + + VA+ + ++ + F QW SA
Sbjct: 575 PVLAILALWIAAREPRPDLFVDGEARTVAVRGPDGALAVMGDRTSGLADRFAVEQWLSAD 634
Query: 260 ITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKD 319
+ C +V + + D
Sbjct: 635 GDRARAGSKELIQAAACDP---------------------LGCTLPLVGGALVALSRHPD 673
Query: 320 MIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIK 379
+ C+L+ +L+T + + +I + + G + ++
Sbjct: 674 SLEDDCRLARVLVTPFTAPSEC---AATVIHLDPRKAGGGVAGYRTEEG-----ELRLVS 725
Query: 380 SAIENLHFPWT 390
+ PW
Sbjct: 726 ANAPYGGRPWQ 736
Score = 36.7 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 40/262 (15%), Positives = 87/262 (33%), Gaps = 15/262 (5%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
DP + + A L PP GPA+PG FDF + ++ GI A GY P+++ +
Sbjct: 191 DPPAVGSHVRLRASLGPPPGPAYPGGFDFGRAVWFDGIGATGYALGRPQIVPAPVIAPAG 250
Query: 69 TW--KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAI 119
+ + + IRA + A + + +++IL+I
Sbjct: 251 LALTTWLDGTRHAIAARIRAALPGEEGGVAVALVTGLRDAVAEPIEESMRVAGLSHILSI 310
Query: 120 PILSFVVIPAGLIAI---LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
L ++ + + LL + + + + AW A + +
Sbjct: 311 SGLHMALVATTVFFLARALLALFPDLALRYPIKAWAAVPAALSATFYLLLSGA-ELATQR 369
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
IV+ +++ +R + + + + + + + L+A +
Sbjct: 370 AYVMTLIVLAGIVLGRPALTLRTLAVAALAVLALTPW-AVLDPGAQMSFAATLALIAAYE 428
Query: 237 KNTLISNYSNPPSFIFSQWKSA 258
+ P + + W
Sbjct: 429 RYGHFVTTP-PGTAEDAVWLRR 449
>gi|162145890|ref|YP_001600348.1| DNA uptake protein [Gluconacetobacter diazotrophicus PAl 5]
gi|161784464|emb|CAP53994.1| putative DNA uptake protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 707
Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/378 (13%), Positives = 115/378 (30%), Gaps = 48/378 (12%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ L + ++ + +
Sbjct: 358 GLAVGATLLLLTGPADLLEAPLQMSLAAVMALAAGFEATRPALSRLREQPDWWR------ 411
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ + A + ++ HF + + ++AN+LA+P+++ ++P G+IA
Sbjct: 412 ---RPALHVAHLALASLLAGGATVPVVMTHFGTLQPWFVLANLLAVPLMALWILPWGVIA 468
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVF 192
+LLM D + M WG+ +++ +AH +S + +P ++ +
Sbjct: 469 LLLMPWGADPVALVPMGWGIRLVLGLAHAVSGWPAARVMVPAMPSWGLAAWMLGLCWLCL 528
Query: 193 CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFI 251
R G + + + PD+L+S G VA+ D I + +
Sbjct: 529 WTRRWRWWGVAPMALALAAPVLVA---RPDVLLSPDGRAVAVRDGAVLRIGPHPGADKAV 585
Query: 252 FSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVI 311
S W+ AL P P + C ++ + R +
Sbjct: 586 ESDWQQALALPLASLPQA---------------------DGRLACRDEACRMDGGRVRLR 624
Query: 312 VGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDN 371
+ C +L+T + + C + + + + G+ + + P
Sbjct: 625 LS-----AAAPAECAGVTLLVTLV--PMDQGCPAARTLDGLTVWQGGAQAVFLRPDGPHV 677
Query: 372 DKVKFIIKSAIENLHFPW 389
+ + PW
Sbjct: 678 VSDRGV------RGARPW 689
>gi|209543802|ref|YP_002276031.1| ComEC/Rec2-like protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209531479|gb|ACI51416.1| ComEC/Rec2-related protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 695
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/378 (13%), Positives = 115/378 (30%), Gaps = 48/378 (12%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ L + ++ + +
Sbjct: 346 GLAVGATLLLLTGPADLLEAPLQMSLAAVMALAAGFEATRPALSRLREQPDWWR------ 399
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ + A + ++ HF + + ++AN+LA+P+++ ++P G+IA
Sbjct: 400 ---RPALHVAHLALASLLAGGATVPVVMTHFGTLQPWFVLANLLAVPLMALWILPWGVIA 456
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVF 192
+LLM D + M WG+ +++ +AH +S + +P ++ +
Sbjct: 457 LLLMPWGADPVALVPMGWGIRLVLGLAHAVSGWPAARVMVPAMPSWGLAAWMLGLCWLCL 516
Query: 193 CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFI 251
R G + + + PD+L+S G VA+ D I + +
Sbjct: 517 WTRRWRWWGVAPMALALAAPVLVA---RPDVLLSPDGRAVAVRDGAVLRIGPHPGADKAV 573
Query: 252 FSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVI 311
S W+ AL P P + C ++ + R +
Sbjct: 574 ESDWQQALALPLASLPQA---------------------DGRLACRDEACRMDGGRVRLR 612
Query: 312 VGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDN 371
+ C +L+T + + C + + + + G+ + + P
Sbjct: 613 LS-----AAAPAECAGVTLLVTLV--PMDQGCPAARTLDGLTVWQGGAQAVFLRPDGPHV 665
Query: 372 DKVKFIIKSAIENLHFPW 389
+ + PW
Sbjct: 666 VSDRGV------RGARPW 677
>gi|330994166|ref|ZP_08318094.1| ComE operon protein 3 [Gluconacetobacter sp. SXCC-1]
gi|329758633|gb|EGG75149.1| ComE operon protein 3 [Gluconacetobacter sp. SXCC-1]
Length = 708
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 44/355 (12%), Positives = 120/355 (33%), Gaps = 37/355 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
+ ++ ++ + S + + + A++ ++
Sbjct: 375 QMSMAAVMALVAGFDALRPVL-------SAWGHDVMWMRRVGARMARPLLASV--LAGSA 425
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ HF + + ++AN+LA+P++S ++P GL+++LLM L + + M WG+ +
Sbjct: 426 CLPVGMAHFGTVQPWFVLANLLAVPLMSVWIMPWGLVSLLLMPLGAEKLALAPMGWGIGV 485
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ +AH ++ + + V + +R +G++ + + ++ +
Sbjct: 486 VAWLAHLVAGLPVARVSVPAMGGGGLVLFFAGLCWLCLWAGRVRLLGALPVVLAVLSPWV 545
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYS-NPPSFIFSQWKSALITPFHEAPHVQKED 273
P +L++ +V +V +++ +P F+ +W+ P
Sbjct: 546 ---GRMPVVLVAPDARMVGVVAGGQVLTGPGTHPDPFVLREWQRVTGLRAGLLPV----- 597
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
+ + C C + IV +L + C + +++
Sbjct: 598 --------------EGRQGRVACRNG-ICRVAGQGGDIVLLLAARMPDAALCLGARVVV- 641
Query: 334 TIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
C + L ++G+ + + + A + P
Sbjct: 642 --NLHGQAGCPGVGRVGRFDLWREGAYALYFRGGDGLEMRTDRATRGARPWVMRP 694
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 11/191 (5%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A T+ A L+PP+ PA PG +D +++ G++ G ++ + +
Sbjct: 160 AGDTLSARALLAPPAFPAMPGGYDAQRRAWFGGLAGYGRALE--RVTSAHPRGPSGMAAW 217
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLI-------KHFHCIPVYGLIANILAIPILSFV 125
+ +++Q IR + A+ L +A++LA+ L
Sbjct: 218 LRTLRQGLAQRIRTALPGPRGTIAATVLTGEDGVIDAETREAFADAGLAHLLAVAGLHLA 277
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++ ++A++ M L+L W I +A ++ G I+
Sbjct: 278 IVMGLVMAVVRMGLALSEHAALF--WPCRQIAGVAALLAGGGYVVLTGAHLPAQRSLIMA 335
Query: 186 EFLLMVFCKTN 196
++
Sbjct: 336 GLAVVALLAGR 346
>gi|326402243|ref|YP_004282324.1| hypothetical protein ACMV_00950 [Acidiphilium multivorum AIU301]
gi|325049104|dbj|BAJ79442.1| hypothetical protein ACMV_00950 [Acidiphilium multivorum AIU301]
Length = 697
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 57/392 (14%), Positives = 127/392 (32%), Gaps = 46/392 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ + L P P F +FS+ I+
Sbjct: 348 RRALSLRGLAVAAFVLMLIEPQAVPGPS-FQMSFSAVLALIAGYE---------AVGRRF 397
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+T + + ++ G ++ F F + Y ++AN++A+P+ + V
Sbjct: 398 DTEGAGWRGRLGRHIAALAFTSLLAGG--ASMPFAAYQFQQVQPYYILANLIAVPLTALV 455
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFVTIV 184
V+PAG++A++LM L L+ + M WG+ ++ +A + + + G P +
Sbjct: 456 VLPAGMVALVLMPLHLEALALAPMGWGIAAMLAVARFVGQLPHALIVIGPSPGWPVALLG 515
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN-TLISN 243
+ L+ + +R G + I + + +PD+L+S +LVA+ D I
Sbjct: 516 LGMALLGLLRGRVRLAGLAPVVIGLAGMML---GRAPDVLVSPTASLVAVRDGAVVRILE 572
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
P + +QW+ + + C
Sbjct: 573 TRRPDQYTLAQWRPVFAHDR------------------VAVARAADICAGGRCRFDHGR- 613
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
V L C + ++I+ +I + + G++ +
Sbjct: 614 --------VLYLADATAAENGCGDARVVISPEPLRGACRARGRYVIDRFSVWRDGAIALR 665
Query: 364 IIPPSNDNDKVKFI--IKSAIENLHFPWTKHR 393
+++ ++ + W + R
Sbjct: 666 FAGGRVRLTTDRWVQGVRPWVAAWPKRWHRRR 697
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 67/217 (30%), Gaps = 12/217 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A ++ A L PS PA+PG + F ++ G+ A+G+ + +
Sbjct: 161 LAAGDSVRVRAFLFAPSRPAYPGGWSFGRDQFFSGLGAVGFAVGKLDVTRVAAPGWGGAL 220
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPILS 123
++ ++++ + + A+ L IP + +A+ILA+ L
Sbjct: 221 RR---LRETIAARVLTAMPPTTGPIAATLLTGFEESIPARERQAFITAGLAHILAVAGLH 277
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++ L A+ + ++ +I G
Sbjct: 278 IGIVMGALFALARFCVGWSEFL--LLRVPAKVIASAVAFAGGVVYAALTGFHVPIERSLA 335
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ +L+ + +++ P +
Sbjct: 336 MAALVLLGIVAGRRALSLRGLAVAAFVLMLIEPQAVP 372
>gi|304322091|ref|YP_003855734.1| competence protein [Parvularcula bermudensis HTCC2503]
gi|303300993|gb|ADM10592.1| competence protein [Parvularcula bermudensis HTCC2503]
Length = 719
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 52/357 (14%), Positives = 121/357 (33%), Gaps = 40/357 (11%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + ++A+ Y+ + ++ + +
Sbjct: 396 GFQMSFAAVTALVATYTALEGRLRPAVTIAGRVRRF--------VLGLMVTSLVAGLATA 447
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
I HF+ + YGL+AN++ +PI S +++P ++ + LM D + + + +GL+ I+
Sbjct: 448 PMAIYHFNQVAAYGLLANLIVMPIFSLLIMPGLVLGLALMPFGADGLVWPITGFGLEAIL 507
Query: 158 HIAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
IA I+ + + P +F T++ L + + R +G+ + L
Sbjct: 508 SIATWIAGWEGAVIAVAQWPPWAFATVLAGGLALCLLRAAWRW---GGLGLIALGLAGAA 564
Query: 217 YSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
+ P +I++ +A+ D++ F QW++ P
Sbjct: 565 SAVPPIAMIADGAGNLAIRDEDGEVAVLSRRRARFSLDQWRAVYGLPK------------ 612
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITT- 334
R+ C + + + +++ + +C+ DI+I
Sbjct: 613 ------------GTALRRLDCPPAAPICVLRTAGPRISLVRSLEAAGQACRTDDIVILPL 660
Query: 335 IRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK--FIIKSAIENLHFPW 389
R ++L+T L+ G + + + + + PW
Sbjct: 661 WRTERITDGCDAVLLTAARLEALGPVALLPARSGSSVGGPQGWRMTSVKAVRGDRPW 717
Score = 36.3 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 1 MLSITKKYDPFPA--ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM 58
++ +T + DP A T+ +L PP GPA PG +D+ Y++GI +G+ + P++
Sbjct: 168 LVRVTWRGDPIAASPGATLSLFGQLMPPPGPAVPGGYDYGRHLYFEGIGGVGFLMAEPRL 227
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YG 111
+ + + + ++Q I + A + +P +
Sbjct: 228 VTEATPTLG-SAAWLQGLRQRIAERIADALPGPAGAVTIALVTGDRSALPPPIVDALRHT 286
Query: 112 LIANILAIPILSFVVIPAGLIAIL 135
+A++LAI L ++ + +L
Sbjct: 287 GLAHLLAISGLHMGLVCGTVFVVL 310
>gi|148259092|ref|YP_001233219.1| ComEC/Rec2-related protein [Acidiphilium cryptum JF-5]
gi|146400773|gb|ABQ29300.1| ComEC/Rec2-related protein [Acidiphilium cryptum JF-5]
Length = 697
Score = 133 bits (333), Expect = 8e-29, Method: Composition-based stats.
Identities = 58/390 (14%), Positives = 125/390 (32%), Gaps = 44/390 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ + L P P F +FS+ I+
Sbjct: 348 RRALSLRGLAVAAFVLMLIEPQAVPGPS-FQMSFSAVLALIAGYE---------AVGRRF 397
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+T + + ++ G ++ F F + Y ++AN++A+P+ + V
Sbjct: 398 DTEGAGWRGRLGRHIAALAFTSLLAGG--ASMPFAAYQFQQVQPYYILANLIAVPLTALV 455
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFVTIV 184
V+PAG++A++LM L L+ + M WG+ ++ +A + + + G P +
Sbjct: 456 VLPAGMVALVLMPLHLEVLALAPMGWGIAAMLAVARFVGQLPHALIVIGPSPGWPVALLG 515
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN-TLISN 243
+ L+ + +R G + I + + +PD+L+S +LVA+ D I
Sbjct: 516 LGMALLGLLRGRVRLAGLAPVVIGLAGMML---GRAPDVLVSPTASLVAVRDGAVVRILE 572
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
P + +QW+ + + C
Sbjct: 573 TRRPDQYTLAQWRPVFAHDR------------------VAVARAADICAGGRCRFDHGR- 613
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
V L C + ++I+ +I + + G++ +
Sbjct: 614 --------VLYLADATAAENGCGDARVVISPEPLRGACRARGRYVIDRFSVWRDGAIALR 665
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+++ +P HR
Sbjct: 666 FAGGRVRLTTDRWVQGVRPWVAAWPKRWHR 695
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/217 (13%), Positives = 68/217 (31%), Gaps = 12/217 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A ++ A L PS PA+PG + F ++ G+ A+G+ + +
Sbjct: 161 LAAGDSVRVRAFLFAPSRPAYPGGWSFGRDQFFSGLGAVGFAVGKLDVTRVAAPGWGGAL 220
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPILS 123
++ ++++ + A + A+ L IP + +A+ILA+ L
Sbjct: 221 RR---LRETIAARVLAAMPPTTGPIAATLLTGFEESIPARERQAFITAGLAHILAVAGLH 277
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++ L A+ + ++ +I G
Sbjct: 278 IGIVMGALFALARFCVGWSEFL--LLRVPAKVIASAVAFAGGVVYAALTGFHVPIERSLA 335
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ +L+ + +++ P +
Sbjct: 336 MAALVLLGIVAGRRALSLRGLAVAAFVLMLIEPQAVP 372
>gi|254796699|ref|YP_003081535.1| ComEC/Rec2 family protein [Neorickettsia risticii str. Illinois]
gi|254589945|gb|ACT69307.1| ComEC/Rec2 family protein [Neorickettsia risticii str. Illinois]
Length = 734
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+ +A+ + F++ HFH + V G+ AN +AIP SF+VIP +LLM L +
Sbjct: 446 IIKTSIFATAATTPFVLYHFHYLSVIGVAANAIAIPFTSFLVIPTLAGILLLMPLHDSEL 505
Query: 145 PFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+ +++ + I++ + S + F + T+ +V LL++ T R++G +
Sbjct: 506 LYALLSTEIKILLSLMESFSHLNLGYFNVQGFSGTTLFVMVTGTLLLLIGTTWKRYLGIM 565
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN-PPSFIFSQWKSALI 260
I + + ++ P PD+ ISEK + D N N P +FI +W
Sbjct: 566 PIAMGVAMIKFSPL---PDIFISEKNIAIRSQDNNLYFLNAPRIPQNFIAKKWLQYSG 620
>gi|88608712|ref|YP_506207.1| ComEC/Rec2 family protein [Neorickettsia sennetsu str. Miyayama]
gi|88600881|gb|ABD46349.1| ComEC/Rec2 family protein [Neorickettsia sennetsu str. Miyayama]
Length = 736
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/249 (21%), Positives = 105/249 (42%), Gaps = 9/249 (3%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+ +A+ + F+ HFH + V G+ AN +AIP SF+VIP +LLM L +
Sbjct: 446 IIKTSIFATAATAPFISYHFHYLSVIGVAANAIAIPFTSFLVIPTLAGILLLMPLYDSEL 505
Query: 145 PFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+ +++ + I++ + S + F + T+ + +V L ++ T R++G +
Sbjct: 506 LYALLSTEIKILLSLMESFSHLNLGYFNVQGFSGTTLLVMVTGTLSLLIGTTWKRYLGIM 565
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN-PPSFIFSQWKSALITP 262
I + I ++ P PD+ ISEK + D N N S P +FI +W
Sbjct: 566 PIAMGIAMIKFSPL---PDIFISEKNIAIRSQDNNLYFLNASRVPQNFIAKKWLQYSGCK 622
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
+ ++ +++++ S + F K ++ V + +
Sbjct: 623 ASKISNIPNSEIEKRENSYVCTKNGKTITITFTKDAK----NRTHNNFSVHMNGPIVDNK 678
Query: 323 LSCQLSDIL 331
+C +I+
Sbjct: 679 RTCSSLEIV 687
>gi|254294063|ref|YP_003060086.1| ComEC/Rec2-related protein [Hirschia baltica ATCC 49814]
gi|254042594|gb|ACT59389.1| ComEC/Rec2-related protein [Hirschia baltica ATCC 49814]
Length = 663
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 83/229 (36%), Gaps = 22/229 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I + + + P PG F +F++ I+
Sbjct: 337 VLIDRPAFSVRSLAVAMVVVICIQPETVVSPG-FQMSFAATAALIALY------------ 383
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTY--GSASASIFLIKHFHCIPVYGLIANILAI 119
W +K +++ F + A GT S + + F HF I +++N++ +
Sbjct: 384 ----ENWPIQKSNNLVGRFWGWLIAVFGTSVTASIATAPFAAFHFGRIAPLSILSNLVVM 439
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
PI+S P+ A++L L++++ I+ + + +
Sbjct: 440 PIISLWAAPSAAFAMILTPFGWQEPMLHSFGVSLEVVLKISRFFQEHSPDGNLASFQVPT 499
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEK 228
F+ ++ LL++ K + IG+ + + + ++ +P + + +
Sbjct: 500 FILLIASGLLIILLKKYYKIIGAFCLILALASVYW---QRNPIIYVDKD 545
Score = 44.0 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 16/235 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI----YSSESHNTWT 69
++ LSPP P G ++FN ++++ + +G+ K I
Sbjct: 150 GRSVSCYVFLSPPPKPLIAGDYNFNRQAFFEKLGGVGFVLGRCKPINTSSVEERDLIARI 209
Query: 70 WKKISSIKQSFLNEIRANIG-TYGSASASIFLIKH-F-----HCIPVYGLIANILAIPIL 122
++ +I++S I +G G + ++ + F +A++LAI L
Sbjct: 210 AIRVDAIRRSISVYIHDLLGHVSGGMATAMITGERSFLSLEDQDTLRSVGLAHLLAISGL 269
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+ A + L + F + + +A I + F G T
Sbjct: 270 HMGL--AAGVFFALFRFIIPWFEFAALRIPAQKLSALAAIIGSSTYLFLSGASVATQRAY 327
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS---FSPDLLISEKGNLVAL 234
I+ L+ + ++++ P + + + L+AL
Sbjct: 328 IMAMVALIAVLIDRPAFSVRSLAVAMVVVICIQPETVVSPGFQMSFAATAALIAL 382
>gi|294084071|ref|YP_003550829.1| DNA uptake protein ComEC [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663644|gb|ADE38745.1| possible DNA uptake protein, ComEC [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 691
Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/350 (12%), Positives = 124/350 (35%), Gaps = 39/350 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + + P+ F +F++ ++ ++ + P++I +
Sbjct: 340 ILLDRLALTLRNVALTAMFVLILNPAALY-TASFQLSFAATMALVAWYEFYATRPRLISA 398
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + + I A++ S + + F +HF + +G++ANI+ IP+
Sbjct: 399 SR----------NPVLAYIGGVIIASL--IASTATAPFTAQHFGAVTPWGVMANIVGIPL 446
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSF 180
++P+G++ ++ + L+ G+M G+D+++ +A IS + I +
Sbjct: 447 TGLWIMPSGILVVIGYMTGLEAYVNGIMQAGIDLLVSLAGYISSLPWAGWRIYPPGYMAL 506
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ L+ + C G + + ++ + + + P ++ KG
Sbjct: 507 AILSAGCLVCIGCHHRAYPFG---LSLLVLAVALWWRTEIPQGVLFAKGQT--------- 554
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
++ H + + + + + +P + K
Sbjct: 555 -------------RFLIMAGQDGIAHSHSSQNHRRLSSFFTDIAERQLARPVHPATMCKP 601
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLIT 350
+C+ V ++ R+ + +CQ +I ++ + N +
Sbjct: 602 YCIDYMADGRKVTIVDRRYNLTTACQSQTDIILSLVPVKYPCRNNVKIYD 651
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 43/242 (17%), Positives = 83/242 (34%), Gaps = 15/242 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + I ARL P P P D+ + + +SA G+ +
Sbjct: 148 ISTDRVSSLPTIGDHIAFSARLYPSPTPILPRSPDYALQAQIRNVSASGFVIGD---LQH 204
Query: 62 SESHNTWTWKKISSIKQSFLNEIR--ANIGTYGSASASIFLIKHFHCIPVY-----GLIA 114
++ + F ++ N G A+A + + F Y +A
Sbjct: 205 DGGQRDSLADRLGRFRNQFALQLSRDMNKPAGGIAAALMVGDRRFISEATYETFRKSGLA 264
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++LAI L ++ G+IA + + SL P M + +A I+ F G
Sbjct: 265 HLLAISGLHMGLLCFGVIAAVRALASLA--PSFSMRVPVHKYAAVAGVITGLGYVFVSGA 322
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRH-IGSIMIGITIIILFTFP--YSFSPDLLISEKGNL 231
I+ F++ + + ++ + +++ Y+ S L + L
Sbjct: 323 SISAVRAFIMALFVISAILLDRLALTLRNVALTAMFVLILNPAALYTASFQLSFAATMAL 382
Query: 232 VA 233
VA
Sbjct: 383 VA 384
>gi|218506605|ref|ZP_03504483.1| hypothetical protein RetlB5_02844 [Rhizobium etli Brasil 5]
Length = 186
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
+ + +IL P S PDL+ISE G LV LV + SN NPP FIF QW+ AL+ P H
Sbjct: 1 LAVATLILLILPGSRPPDLVISEDGGLVGLVAATAMASNRENPPDFIFDQWQRALVLPTH 60
Query: 265 EAPHVQK----------------EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRS 308
P + D Q + ++++ + +F C+KK++C+ +
Sbjct: 61 HPPKMLDGPAIPPQGEDRRVKLSRDQQNEARTAMVAAAAGGEANRFSCVKKAWCIARLGN 120
Query: 309 DVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPS 368
+V V+ + +C++ +I++T++R + + + L T E L++ GS+E+
Sbjct: 121 GHVVAVIDNAAYLGPACEVGEIVVTSVRLRFDRCRSGASLFTGETLRRTGSVELRFAQTG 180
Query: 369 NDNDKV 374
+
Sbjct: 181 LEIATA 186
>gi|91204981|ref|YP_537336.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
gi|91068525|gb|ABE04247.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
Length = 275
Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 72/179 (40%), Gaps = 5/179 (2%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
S + +I F Y + N++A+P++SF ++P L+++ ++ D+ +
Sbjct: 24 SFLASIITAPVVINQFFIFSTYSVPTNLIAVPVMSFFLMPLALLSLPFTMIGFDSYILKI 83
Query: 149 MAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+ + ++III AH + + G I S + + F + KT R G ++ +
Sbjct: 84 IGFFIEIIIRSAHYFNNLPGSVWYFGYITNFSILLFLFGFFWICIWKTTWRLFGLAIMAV 143
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI-SNYSNPPSFIFSQWKSALITPFHE 265
+ I + YS P+L+ + + +K + +F W +
Sbjct: 144 SFIFML---YSPKPELIFDASNMAIGVKNKQGKLEIYADKMATFNRIYWANWFGQKDSI 199
>gi|291166064|gb|EFE28110.1| late competence operon required for DNA binding and uptake
[Filifactor alocis ATCC 35896]
Length = 450
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 77/195 (39%), Gaps = 16/195 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
I +KYD A + + + + P +D F + + +IG FY PK+ +
Sbjct: 239 FLIRRKYDLLAAVSFLITVILIHNPWKV-----WDIGFQLSFASVISIGIFY--PKLHRT 291
Query: 62 SESHNTW-----TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI 116
TW W+ + ++ I + I +FH IP+YG+IAN+
Sbjct: 292 MGQFLTWNPTNKVWEYGKVMVGYMISLIEVTV--AAQLLTLPLCIYYFHQIPIYGIIANL 349
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH--NEFCIGR 174
+AIP+++ +I + L +++ + G+D ++H H+++ N
Sbjct: 350 VAIPMITIDMILFLVAFFLPNGFFVEHYVIELCNKGMDYLLHWIHQLTALPFSNLKASEF 409
Query: 175 IPETSFVTIVVEFLL 189
P + +
Sbjct: 410 SPYWLILIYTPVVIW 424
>gi|296537259|ref|ZP_06899153.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262414|gb|EFH09145.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 224
Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 43/211 (20%), Positives = 83/211 (39%), Gaps = 5/211 (2%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + + + HF + +YGL AN++A+P+ SF+
Sbjct: 1 RRAAAARHPLLPALLWPVGLLLASLLAGLATLPYGLHHFGRLQLYGLAANMVAVPLTSFL 60
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSFVTIV 184
V+PAGL A+L L L+ P +M WG++ ++ +A ++ R +P +
Sbjct: 61 VMPAGLAAMLAWPLGLEQWPLWLMGWGVEGVLWVARSVAAWPGAALPARPMPGWGLGLLS 120
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+ L + + R G +I LF+ PD+L+S L+A + +
Sbjct: 121 LGLLWLCLWRQGWRWWGVPLIAAG---LFSALAVRPPDILVSADARLIAFRTEAGVALQR 177
Query: 245 -SNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
+F+ W + A + + L
Sbjct: 178 LPGGTAFLRDNWLRSWGEEAGSALAIDRPGL 208
>gi|51245556|ref|YP_065440.1| ComE operon protein 3 [Desulfotalea psychrophila LSv54]
gi|50876593|emb|CAG36433.1| related to ComE operon protein 3 [Desulfotalea psychrophila LSv54]
Length = 855
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 76/221 (34%), Gaps = 9/221 (4%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L I +K P + LS P F F +F++ GIS + +
Sbjct: 346 LCIDRKKSPITLIACAALLILLSHPQQ-IFTASFQLSFAAVV-GISLVIPQLQKRLLPPP 403
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
E+ +W + + + T + + + HF+ I + G I N++A P+
Sbjct: 404 KETSRAISW----LLISKNIILAALLVSTVATLAILPLSLFHFNRISLIGPITNLIAEPL 459
Query: 122 LSFVVIPAGLIAILL--MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-T 178
+ +P G++AI L ++ L I + WGL + I + P
Sbjct: 460 ICLWSLPLGILAIPLKYILPGLSEILLHMGGWGLLLSISFTDLCARLPFVQIWTTTPAIW 519
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
V F+L++ I I L + S
Sbjct: 520 LIVLYYFGFILLLLRGLWRGGTVLASILIGAAFLLLWLPST 560
>gi|291613863|ref|YP_003524020.1| DNA internalization-related competence protein ComEC/Rec2
[Sideroxydans lithotrophicus ES-1]
gi|291583975|gb|ADE11633.1| DNA internalization-related competence protein ComEC/Rec2
[Sideroxydans lithotrophicus ES-1]
Length = 786
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 89/257 (34%), Gaps = 33/257 (12%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
ML +++ P + L+ P PG F + ++ I Y
Sbjct: 323 MLMLSRNVSPSQLLAYALMVVLLADPWAVLSPG-----FWLSFGAVALIFYV-------- 369
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
++ +++ + IG A F + + +AN AIP
Sbjct: 370 -----TANRLRRQHWLREYGKVQWAMMIGLIPPLLAL------FQQLSLVSPLANAFAIP 418
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETS 179
++SF+V+P L+ L V + + +++ H + + P +
Sbjct: 419 LVSFIVVPLTLLGTLP-PF---EWMLYVAHEAMTLCMYLLHLLDKLPYVVWSQHAPPAWT 474
Query: 180 FVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALVD 236
+ + L ++ + +R +GS+++ ++ P + L++ + +G VA+
Sbjct: 475 ILAGIGGALWLLSPRGFPMRWLGSLLLLPMFLVAPERPAAGGARLVVFDVGQGLSVAVQT 534
Query: 237 KNTLISNYSNPPSFIFS 253
+ Y P F
Sbjct: 535 -HAHALLYDTGPDFSGE 550
>gi|237746040|ref|ZP_04576520.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377391|gb|EEO27482.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 809
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 90/298 (30%), Gaps = 26/298 (8%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY-SIPKMIYSSESHNTWT 69
G+ L P PG F + + I Y + + +S
Sbjct: 352 SHVLLAAAGVVLLFDPLALMKPG-----FWLSFVAVGTILYATADRTRRLPEKDS----- 401
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ S ++ + R + + F + + G +AN LAIP++S V P
Sbjct: 402 --RFSRLRHILGSAARTQWAV--TIGLVPLTMLFFGRVSLIGPLANALAIPVVSLFVTPL 457
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV-EFL 188
L+ +L L N+ V+ + + + I + +P + + L
Sbjct: 458 ALLGSVL-PSPLINLVLTVVHFAIQTLADILEWLGFLPFAVWSAPVPSFYLIIFALAGTL 516
Query: 189 LMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALVDKNTLISNYS 245
M+ K R +G + + P + + + +G+ V + + + +
Sbjct: 517 WMLAPKGWPFRGLGLLCWLPLFLSAPAHPGYGEAWITVLDVGQGSAVLVETQKHRLLFDT 576
Query: 246 NPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
P W + K ++ + + + L + V
Sbjct: 577 GPR------WSANASAAESVIYPYLKSRGTDRLDTIVVSHGDNDHSGGLLALTGKLPV 628
Score = 45.2 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 35/226 (15%), Positives = 77/226 (34%), Gaps = 26/226 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT---WKKISSIK 77
RL P GPA P FD+ + +GI A G+ + ++ +E +T+ I++I+
Sbjct: 159 VRLKRPHGPANPDGFDYELWLFEQGIRATGHVNTDVRLPDPNELVDTFVFTPMNAINAIR 218
Query: 78 QSFLNEIRANI--GTYGSASASIFLIKH----------FHCIPVYGLIANILAIPILSFV 125
Q I + G Y ++ + + F+ I++++AI L
Sbjct: 219 QKLRERIYRALPDGEYAGVIVALVIGEQKAISRSDWEIFNRTG----ISHLVAISGLHIT 274
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV---- 181
++ ++ + F L + A I+ +
Sbjct: 275 LVSGLFAGLVSALW--RRSFFTKKQLPLLLPAQKAAAIAGVGMALLYVALAGFGIPARRT 332
Query: 182 TIVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTFPYSFSPDLLIS 226
++ + + + R ++ +++LF P +S
Sbjct: 333 LCMIVIVALALWTGRLTRFSHVLLAAAGVVLLFDPLALMKPGFWLS 378
>gi|89068876|ref|ZP_01156258.1| Putative Competence protein [Oceanicola granulosus HTCC2516]
gi|89045457|gb|EAR51521.1| Putative Competence protein [Oceanicola granulosus HTCC2516]
Length = 792
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 17/152 (11%)
Query: 22 RLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFL 81
L P PG F +F++ ++ P + +
Sbjct: 332 LLRRPEELTGPG-FQMSFAATVALVAVFAALRRAPWRLP----------------RGLRG 374
Query: 82 NEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL 141
T + + HF+ + YGLIAN+ ++P++ V+PA ++A L L L
Sbjct: 375 VAAVVVSSTVAGLATAPIAAAHFNMVSHYGLIANLASVPVMGAAVMPAAVLAACLWPLGL 434
Query: 142 DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
+ VM GL I+ +A ++
Sbjct: 435 EGPALWVMEQGLGWILAVAEHVAGLEGAVGHV 466
>gi|218659310|ref|ZP_03515240.1| hypothetical protein RetlI_06426 [Rhizobium etli IE4771]
Length = 190
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
I PS P F +F++ +S GY + + + + + ++
Sbjct: 57 ALIIIAISPSEVLGPS-FQMSFAATLALVS--GYQLWKERRVRENPLLKLPVLRPVVAVA 113
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
F ++ G S ++F ++HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM
Sbjct: 114 GFFGGVFLTSL--IGGFSTALFAVEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLM 171
Query: 138 ILSLDNIPFGVMAWGLDII 156
LD + V+ + LD++
Sbjct: 172 PFGLDAPLWTVVGFCLDVV 190
>gi|145589646|ref|YP_001156243.1| DNA internalization-related competence protein ComEC/Rec2
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145048052|gb|ABP34679.1| DNA internalization-related competence protein ComEC/Rec2
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 801
Score = 99.1 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 65/193 (33%), Gaps = 8/193 (4%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ F + P P PG F + ++AI + + +
Sbjct: 309 RNPRAFDIWWWALAFVLVIDPMAPYTPG-----FWLSFGAVAAILFAMGDSAGLIGIPTG 363
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++ + Q+F R + + + F + F+ + V +AN +AIP++S++
Sbjct: 364 KELEVHWVARLSQAFREACR--VQAVVTIALLPFTLYWFYQVSVVSPVANAIAIPLVSYI 421
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
V P + LL + + ++ + ++ + PE + +
Sbjct: 422 VTPLAISGALL-PDFIGRWLLLLAHISMEYLAIFLEWLASWKWAVVWSQQPEWWLLLLSG 480
Query: 186 EFLLMVFCKTNIR 198
++ N+
Sbjct: 481 TGIIYAIRPGNLA 493
Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 63/252 (25%), Gaps = 32/252 (12%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK-- 71
+ A+L P G P FDF ++++ A G S ++ + +
Sbjct: 122 GQRWKLKAKLKRPYGALNPHTFDFERWAFHQDFGATGSVRSGELLLAKEIGWLEFELQME 181
Query: 72 -KISSIKQSFLNEIRANIGTYGSASASIFL---------IKHFHCIPVYGLIANILAIPI 121
++Q + + G A + F+ I ++++I
Sbjct: 182 LARWKLRQKIETLLPTDARYAGVMIALVMGDQNAIPQDDWYVFNATG----IGHLISISG 237
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
L ++ A + + A ++ + G
Sbjct: 238 LHVTMLAGVGAAFAAFFW---RRGSWPLRIPVGKFAAAAGFLTAFIYAWLAGFQIPAQRT 294
Query: 182 TIVVEFLLMVFCKTN------IRHIGSI------MIGITIIILFTFPYSFSPDLL-ISEK 228
+V + I + + + + L + +
Sbjct: 295 MYMVGVVAFALWSGRNPRAFDIWWWALAFVLVIDPMAPYTPGFWLSFGAVAAILFAMGDS 354
Query: 229 GNLVALVDKNTL 240
L+ + L
Sbjct: 355 AGLIGIPTGKEL 366
>gi|255262298|ref|ZP_05341640.1| competence protein [Thalassiobium sp. R2A62]
gi|255104633|gb|EET47307.1| competence protein [Thalassiobium sp. R2A62]
Length = 224
Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 66/179 (36%), Gaps = 17/179 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ A I + P PG F +F++ ++ +P+++
Sbjct: 49 ILLGRRALTLRAVAVAALIVLVLRPEALTGPG-FQMSFAATTALVAVFSALRDMPRILPK 107
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + + + F HF+ I YGLIAN+LA+P+
Sbjct: 108 WSSP----------------IVVVVVSSAVAGFATAPFAAVHFNQISHYGLIANLLAVPM 151
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ VV+PA ++A+ L L I F +M L I+ +A + P
Sbjct: 152 MGTVVMPAAVLAVCLAPFDLAWIGFWIMEQRLTWILFVAQSAASQPRAVSHVVTPAPVV 210
>gi|152981628|ref|YP_001352958.1| DNA internalization-related competence protein ComEC/Rec2
[Janthinobacterium sp. Marseille]
gi|151281705|gb|ABR90115.1| DNA internalization-related competence protein ComEC/Rec2
[Janthinobacterium sp. Marseille]
Length = 804
Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 69/223 (30%), Gaps = 18/223 (8%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
G+ L P PG F + ++ I Y + W
Sbjct: 355 ALGVVVLLDPWSVLGPG-----FWLSFGAVAVILYVSVGRARAPVKAGQSRW-------- 401
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ + F + +AN +AIP++SF+V P L+ +L
Sbjct: 402 --RVALRNAGMTQYAVTIGLVPLTVLMFGQASLVSPLANAIAIPLVSFLVTPLALVGSVL 459
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS-FVTIVVEFLLMVFCKT 195
L V W + + + +S IP F + + M+ +
Sbjct: 460 -PAPLSGWCLQVAHWLVQELAQLLTWMSSWQLAVWTVPIPSWWMFALALFGTVWMLAPRG 518
Query: 196 N-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
R++G ++ T P + + + G +AL+ +
Sbjct: 519 WPARYLGLFAWLPLLLNTATHPRAGEMWVTAFDVGQGMALLIE 561
>gi|85859322|ref|YP_461524.1| metallo-beta-lactamase superfamily protein [Syntrophus
aciditrophicus SB]
gi|85722413|gb|ABC77356.1| metallo-beta-lactamase superfamily [Syntrophus aciditrophicus SB]
Length = 831
Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 87/263 (33%), Gaps = 32/263 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-------YFYS 54
L + ++ DP + + + P LFD +F + +++I F
Sbjct: 326 LLLDRRQDPANSLAAAAVLILMFSPDA-----LFDISFQLSFAAVASIIGINPVFSRFMM 380
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
P+ + S W K +I + + ++ F+ + + L A
Sbjct: 381 KPESLPESTGKTAWIVKIKRNI------LLFLITTVSVTLGTMPIIVFCFNRLSLVVLPA 434
Query: 115 NILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHN-EFC 171
N++ +PIL + +P ++ I++ S L + AW + + + + ++ F
Sbjct: 435 NMILVPILGLLALPLSMMVIVVSPFSEMLAGLLIHCSAWLIKLSLILIDFLAGLDGTAFY 494
Query: 172 IGRIPETSFV----TIVVEFLLMVFCK-------TNIRHIGSIMIGITIIILFTFPYSFS 220
+ ++ ++ + R + ++ + + L S
Sbjct: 495 VCTPSLWQIAAFYMLLISGIQMIDLFRQDDIPGLQRKRRLFGLLFIVMLTFLAGGSVLQS 554
Query: 221 PDLLISEKGNLVALVDKNTLISN 243
+ + + + A+ +
Sbjct: 555 VQRINNRELTVTAIDVHQGSATL 577
>gi|20807422|ref|NP_622593.1| hydrolase of metallo-beta-lactamase fold [Thermoanaerobacter
tengcongensis MB4]
gi|20515944|gb|AAM24197.1| predicted hydrolases of metallo-beta-lactamase fold
[Thermoanaerobacter tengcongensis MB4]
Length = 759
Score = 96.0 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 86/256 (33%), Gaps = 27/256 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K + + + + L P L+D F + AI YFY
Sbjct: 297 KNKNSINSLSFAAFLILLFNPL-----MLWDVGFQLSFVATLAILYFYRP---------- 341
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++ + I N+ F++ +FH I ++NI +P+++
Sbjct: 342 ---IDERLFKLPSYLKGIIALNLS--AQIGTIPFVMYYFHYISFVSFLSNIAIVPLVNIA 396
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+I + L A L + ++ + ++++ + IP + +
Sbjct: 397 IILSFLSAFLGFVFPTASVFVNYINIPFIELLFKVTSFFEKFPYASVNVFIPPVIVIVLY 456
Query: 185 VEFLLMVFCKTNIR--HIGSIMIGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKN 238
L ++ + +R + + I +LF + Y DL ++ +G+ + +
Sbjct: 457 YIVLGILISRIELRKKKLAVAASFMVIALLFFWNYFVPKDLEVTFLDVGQGDATFVRTPH 516
Query: 239 TLISNYSNPPSFIFSQ 254
+ +FS
Sbjct: 517 GRAFLIDGGGNPVFSN 532
>gi|261222311|ref|ZP_05936592.1| DNA uptake protein [Brucella ceti B1/94]
gi|260920895|gb|EEX87548.1| DNA uptake protein [Brucella ceti B1/94]
Length = 266
Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 64/206 (31%), Gaps = 43/206 (20%)
Query: 219 FSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
PD+++SE LV + ++ N P F WKSA + P +
Sbjct: 32 PFPDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIEPQKGTKK---- 87
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
+ F+C + C R + + M ++C + DI I I
Sbjct: 88 --------NNAGSSSGFICEEG-VCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISG 138
Query: 338 INT-KLCNVSLLITPEILQKQGSLEITII----------------------------PPS 368
+L+I+ L +G+LEI + P
Sbjct: 139 KGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPKPGLEAEQLPNR 198
Query: 369 NDNDKVKFIIKSAIENLHFPWTKHRI 394
+ + A++ PW HR+
Sbjct: 199 PAFQYYRDQLTFAVDAPSRPWHLHRL 224
>gi|89100803|ref|ZP_01173655.1| late competence protein (DNA uptake) [Bacillus sp. NRRL B-14911]
gi|89084449|gb|EAR63598.1| late competence protein (DNA uptake) [Bacillus sp. NRRL B-14911]
Length = 615
Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 88/267 (32%), Gaps = 36/267 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
KK P A +++ + P PG F +F + I +
Sbjct: 306 KKKLQPIDAVSSVFAVCLFFSPHIVYEPG-FQLSFCVSFALIIS---------------- 348
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ + + +++ ++ F+ I ++ L AN+L IP SF
Sbjct: 349 ----APSIFKNLNHWISQSV--AVSLAAQLASAPIILFFFYEISLFALFANLLYIPFFSF 402
Query: 125 VVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFV 181
+++P L+ LL IL + V+ W + A ++ + G+ +
Sbjct: 403 ILLPGILLGFLLHILSGGNAGLILQVLEWSAGMANLAAGKLGSLPGAVLVLGKPSGPALA 462
Query: 182 TIVVEF-LLMVFCKTNIRHIGSIMIGITIIILFTFP--YSFSPDLLIS------EKGNLV 232
+ L++ + H M+ +++ P FSP I+ LV
Sbjct: 463 MYITGVPALLIIWERKKEHFTLKMVAGMLLLFSFQPLEQKFSPKGEITFLDVGQGDSILV 522
Query: 233 ALVDKNTLISNYSNPP-SFIFSQWKSA 258
+L + F +W+
Sbjct: 523 SLPYGKGDYLIDTGGRLQFETEEWEKR 549
>gi|15891940|ref|NP_359654.1| putative competence locus E protein 3 [Rickettsia conorii str.
Malish 7]
gi|15619050|gb|AAL02555.1| competence locus E protein 3-like protein [Rickettsia conorii str.
Malish 7]
Length = 244
Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 10/161 (6%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + I P P F +F + ++ ++ ++ +
Sbjct: 94 PLHSLAIAAFIILSLNPEYIFHPS-FQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFG-- 150
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++K + I + S + +I F Y + AN++ +PI F ++P
Sbjct: 151 -----AVKFYTASNIYS--SFLASIITAPVVINQFFIFATYSVPANLIVVPITLFFLMPL 203
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
L+++ ++ DN +M + +DIII A +
Sbjct: 204 ALLSLPFTMIGFDNYILKLMGFFIDIIIKSAAYFNSLPAAV 244
>gi|165932574|ref|YP_001649363.1| DNA translocation competence protein [Rickettsia rickettsii str.
Iowa]
gi|165907661|gb|ABY71957.1| DNA translocation competence protein [Rickettsia rickettsii str.
Iowa]
Length = 245
Score = 93.3 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 10/161 (6%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + I P P F +F + + ++ ++ +
Sbjct: 95 PLNSLAIAAFIILSLNPEYIFHPS-FQLSFIAVLSLVVGYEFYLKNSWLLGEKKGIFG-- 151
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++K + I + S + +I F Y + N++ +PI SF ++P
Sbjct: 152 -----AVKFYTASNIYS--SFLASIITAPVVINQFFIFATYSVPTNLIVVPITSFFLMPL 204
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
L+++ ++ DN +M + +DIII A +
Sbjct: 205 ALLSLPFTMIGFDNYILKLMGFFIDIIIKSAAYFNSLPAAV 245
>gi|167037815|ref|YP_001665393.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116233|ref|YP_004186392.1| DNA internalization-like competence protein ComEC/Rec2
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166856649|gb|ABY95057.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929324|gb|ADV80009.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 757
Score = 93.3 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 92/258 (35%), Gaps = 29/258 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
KK++ + + + + P L+D F + AI YFY +
Sbjct: 298 KKHNSINSLSFAAFVILIFNPL-----MLWDVGFQLSFVATLAILYFYKPIR-------- 344
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+K+S + + + F + +FH I + L++NI+ +P+ +
Sbjct: 345 -----EKLSMLNPKIRELVALTLS--AQIGTIPFTMYYFHYISIISLLSNIVIVPLANIA 397
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V+ L A++ +I + + +++I++I + +P + +
Sbjct: 398 VVLGFLSAMIGLIFPPLSYFINFINIPVVEVILYITKLFNSFPYASINTIVPPLYVIVLY 457
Query: 185 VEFLLMVFCK--TNIRHIGSIMIGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKN 238
L ++ + I + +I +F + Y DL ++ +G+ + +
Sbjct: 458 YGILAVLLSSFDKKTKKISIAIALTFVIAIFFYNYLLPKDLEVTFLDVGQGDSTFVRTPH 517
Query: 239 T--LISNYSNPPSFIFSQ 254
+ + P F S
Sbjct: 518 GKTFLIDGGGRPLFAISS 535
>gi|167040715|ref|YP_001663700.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X514]
gi|300914755|ref|ZP_07132071.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X561]
gi|307724011|ref|YP_003903762.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X513]
gi|166854955|gb|ABY93364.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X514]
gi|300889690|gb|EFK84836.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X561]
gi|307581072|gb|ADN54471.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X513]
Length = 757
Score = 93.3 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 92/258 (35%), Gaps = 29/258 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
KK++ + + + + P L+D F + AI YFY +
Sbjct: 298 KKHNSINSLSFAAFVILIFNPL-----MLWDVGFQLSFVATLAILYFYKPIR-------- 344
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+K+S + + + F + +FH I + L++NI+ +P+ +
Sbjct: 345 -----EKLSMLNPKIRELVALTLS--AQIGTIPFTMYYFHYISIISLLSNIVIVPLANIA 397
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V+ L A++ +I + + +++I++I + +P + +
Sbjct: 398 VVLGFLSAMIGLIFPPLSYFINFINIPVVEVILYITKLFNSFPYASINTIVPPLYVIVLY 457
Query: 185 VEFLLMVFCK--TNIRHIGSIMIGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKN 238
L ++ + I + +I +F + Y DL ++ +G+ + +
Sbjct: 458 YGILAVLLSSFDKKTKKISIAIALTFVIAIFFYNYLLPKDLEVTFLDVGQGDSTFVRTPH 517
Query: 239 T--LISNYSNPPSFIFSQ 254
+ + P F S
Sbjct: 518 GKTFLIDGGGRPLFAISS 535
>gi|237748449|ref|ZP_04578929.1| DNA internalization-related competence protein [Oxalobacter
formigenes OXCC13]
gi|229379811|gb|EEO29902.1| DNA internalization-related competence protein [Oxalobacter
formigenes OXCC13]
Length = 809
Score = 92.9 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 67/222 (30%), Gaps = 16/222 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
GI L P PG F + + I Y S
Sbjct: 352 SHTLLVAAGIICLFDPWALLQPG-----FWLSFGAVGMILYATSGR------TGKMDENP 400
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+++ + S + + F I V G IAN +AIP++S VV P
Sbjct: 401 SRLNRFRHSLSTAAATQWAV--TIGLVPLTMLFFGRISVIGPIANAVAIPLVSTVVTPLA 458
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLL 189
LI +L ++ V + ++ +S P + L
Sbjct: 459 LIGSIL-PEPVNAYVLTVAHFLTRLLAIFLEWLSSFSFAVWTAPAPSFYLILFAMAGTLW 517
Query: 190 MVFCKTNI-RHIGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
M+ K R++G + +++ P + + + G
Sbjct: 518 MLAPKGWPHRYLGVLCWLPLLLLTPDHPDYGEAKMTVFDVGQ 559
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 80/243 (32%), Gaps = 32/243 (13%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS---SESHNTWTWKKISSIK 77
RL P G A P FD+ + +GI A GY + P++ ++S + ++ ++
Sbjct: 159 VRLKRPHGNANPDGFDYELWLFEQGIRATGYVNNDPRLPDKNVLTDSFVSTPMNWVNRVR 218
Query: 78 QSFLNEIRANIGTYGSASASIFLI------------KHFHCIPVYGLIANILAIPILSFV 125
I + A + L+ + F+ I++++AI L +
Sbjct: 219 SVLRERIYRALPNCEYAGVMVALVIGDQKAISQSDWEIFNRTG----ISHLVAISGLH-I 273
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN---EFCIGRIPETSFV- 181
+ + L A+ + +I+ A +++ +
Sbjct: 274 TMISSLFALF---IGSLWRRSFFTGKQWPLILP-AQKVAAIAGVLMALAYVALAGFGVPA 329
Query: 182 ---TIVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
++ + + + R ++++ II LF P +S + L
Sbjct: 330 RRTLCMIIIVAIALWTGRLTRFSHTLLVAAGIICLFDPWALLQPGFWLSFGAVGMILYAT 389
Query: 238 NTL 240
+
Sbjct: 390 SGR 392
>gi|157827885|ref|YP_001494127.1| hypothetical protein A1G_00115 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157800366|gb|ABV75619.1| hypothetical protein A1G_00115 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 242
Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 10/161 (6%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + I P P F +F + + ++ ++ +
Sbjct: 92 PLNSLAIAAFIILSLNPEYIFHPS-FQLSFIAVLSLVVGYEFYLKNSWLLGEKKGIFG-- 148
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++K + I + S + +I F Y + N++ +PI SF ++P
Sbjct: 149 -----AVKFYTASNIYS--SFLASIITAPVVINQFFIFATYSVPTNLIVVPITSFFLMPL 201
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
L+++ ++ DN +M + +DIII A +
Sbjct: 202 ALLSLPFTMIGFDNYILKLMGFFIDIIIKSAAYFNSLPAAV 242
>gi|238650333|ref|YP_002916185.1| DNA translocation competence protein [Rickettsia peacockii str.
Rustic]
gi|238624431|gb|ACR47137.1| DNA translocation competence protein [Rickettsia peacockii str.
Rustic]
Length = 245
Score = 92.6 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 10/161 (6%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + I P P F +F + ++ ++ ++ +
Sbjct: 95 PLHSLAIAAFIILSLNPEYIFHPS-FQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFG-- 151
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++K + I + S + +I Y + AN++ +PI SF ++P
Sbjct: 152 -----AVKFYTASNIYS--SFLASIITAPVVINQLFIFATYSVPANLIIVPITSFFLMPL 204
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
L+++ ++ DN +M + +DIII A +
Sbjct: 205 ALLSLPFTMIGFDNYILKLMGFFIDIIIKSAAYFNSLPAAV 245
>gi|302878890|ref|YP_003847454.1| DNA internalization-related competence protein ComEC/Rec2
[Gallionella capsiferriformans ES-2]
gi|302581679|gb|ADL55690.1| DNA internalization-related competence protein ComEC/Rec2
[Gallionella capsiferriformans ES-2]
Length = 786
Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/238 (15%), Positives = 86/238 (36%), Gaps = 13/238 (5%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + + + ++ P PG F + ++ I Y+ I
Sbjct: 321 LWLNRNFSLAQILSIALLEVLIADPWAILSPG-----FLLSFGAVALIL--YTTSHRIGR 373
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+++ ++ + + + L+ F + IAN AIP+
Sbjct: 374 TDAQTPGILPQVRTHQILRGIRDYFTVQWAMYIGLLPLLLMLFGQFSLVSPIANAFAIPL 433
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSF 180
+S VV+P L L +P + LD+ + +S + I IP S
Sbjct: 434 ISLVVVPLALTGAALP----GEVPLWLAHIALDLTMLPLQGLSDWPDAIWIQHIPPHWSI 489
Query: 181 VTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
T ++ L ++ + + R +G +++ + P S + L + + G ++++ +
Sbjct: 490 ATGMLGVLWILLPQGFSSRWLGGLLLLPMFLNTPAPPKSGTLRLTLFDVGQGLSVLAE 547
>gi|34581023|ref|ZP_00142503.1| hypothetical competence locus E protein 3 [Rickettsia sibirica 246]
gi|28262408|gb|EAA25912.1| hypothetical competence locus E protein 3 [Rickettsia sibirica 246]
Length = 154
Score = 91.8 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 10/161 (6%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + I P P F +F + ++ ++ ++ +
Sbjct: 4 PLHSLAIAAFIILSLNPEYIFHPS-FQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFG-- 60
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++K + I + S + +I F Y + AN++ +PI SF ++P
Sbjct: 61 -----AVKFYTASNIYS--SFLASIITAPVVINQFFIFATYSVPANLIVVPITSFFLMPL 113
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
L+++ ++ DN ++ + +DIII A +
Sbjct: 114 ALLSLPFTMIGFDNYILKLIGFFIDIIIKSATYFNSLPAAV 154
>gi|326389877|ref|ZP_08211441.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter ethanolicus JW 200]
gi|325994145|gb|EGD52573.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter ethanolicus JW 200]
Length = 757
Score = 89.9 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 92/258 (35%), Gaps = 29/258 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
KK++ + + + + P L+D F + AI YFY +
Sbjct: 298 KKHNSINSLSFAAFVILIFNPL-----MLWDVGFQLSFVATLAILYFYKPIR-------- 344
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+K+S + + + + F + ++H I + L++NI+ +P+ +
Sbjct: 345 -----EKLSMLNPKIRDLVALTLS--AQIGTIPFTMYYYHYISIISLLSNIVIVPLANIA 397
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V+ L A++ +I + + ++ I++I + +P + +
Sbjct: 398 VVLGFLSAMIGLIFPPLSYFINYINIPVVEAILYITKLFNSFPYASINTIVPPLYVIVLY 457
Query: 185 VEFLLMVFCK--TNIRHIGSIMIGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKN 238
L ++ + I + +I +F + Y DL ++ +G+ + +
Sbjct: 458 YGILTVLLSSFDKKTKKISIAIALTFVIAIFFYNYLLPKDLEVTFLDVGQGDSTFVRTPH 517
Query: 239 T--LISNYSNPPSFIFSQ 254
+ + P F S
Sbjct: 518 GKTFLIDGGGKPLFATSS 535
>gi|307266449|ref|ZP_07547985.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter wiegelii Rt8.B1]
gi|306918557|gb|EFN48795.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 757
Score = 89.5 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 92/258 (35%), Gaps = 29/258 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
KK++ + + + + P L+D F + AI YFY +
Sbjct: 298 KKHNSINSLSFAAFVILIFNPL-----MLWDVGFQLSFVATLAILYFYKPIR-------- 344
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+K+S + + + + F + ++H I + L++NI+ +P+ +
Sbjct: 345 -----EKLSMLNPKIQDLVALTLS--AQIGTIPFTMYYYHYISIISLLSNIVIVPLANIA 397
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V+ L A++ +I + + ++ I++I + +P + +
Sbjct: 398 VVLGFLSAMIGLIFPPLSYFINYINIPVVEAILYITKLFNSFPYASINTIVPPLYVIVLY 457
Query: 185 VEFLLMVFCK--TNIRHIGSIMIGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKN 238
L ++ + I + +I +F + Y DL ++ +G+ + +
Sbjct: 458 YGILTVLLSSFDKKTKKISIAIALTFVIAIFFYNYLLPKDLEVTFLDVGQGDSTFVRTPH 517
Query: 239 T--LISNYSNPPSFIFSQ 254
+ + P F S
Sbjct: 518 GKTFLIDGGGKPLFATSS 535
>gi|289550641|ref|YP_003471545.1| Late competence protein ComEC [Staphylococcus lugdunensis HKU09-01]
gi|289180173|gb|ADC87418.1| Late competence protein ComEC [Staphylococcus lugdunensis HKU09-01]
Length = 733
Score = 89.5 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 2/136 (1%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ ++ P + I I L P + GL F I + Y I
Sbjct: 250 IFAVETQFAPSALRSIIAMIIILFKPKRTSLSGLNILAFVFLLLLIVQPDFLYDIGFQFS 309
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
S + SI + I A + I HF+ + G++ N++ +P
Sbjct: 310 FLISLFLILAQP--SIHHLSRLKAFFVITYIAQLGALLIQIYHFNQVQWIGILTNLIFVP 367
Query: 121 ILSFVVIPAGLIAILL 136
+ SF+ P L L+
Sbjct: 368 LYSFIYFPLTLFFFLI 383
>gi|256752148|ref|ZP_05493014.1| ComEC/Rec2-related protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748962|gb|EEU62000.1| ComEC/Rec2-related protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 536
Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 92/255 (36%), Gaps = 28/255 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
KK++ + + + + P L+D F + AI YFY +
Sbjct: 298 KKHNSINSLSFAAFVILIFNPL-----MLWDVGFQLSFVATLAILYFYKPIR-------- 344
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+K+S + + + F + +FH I + L++NI+ +P+ +
Sbjct: 345 -----EKLSMLNPKIRELVALTLS--AQIGTIPFTMYYFHYISIISLLSNIVIVPLANIA 397
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V+ L A++ +I + + +++I++I + +P + +
Sbjct: 398 VVLGFLSAMIGLIFPPLSYFINFINIPVVEVILYITKLFNSFPYASINTIVPPLYVIVLY 457
Query: 185 VEFLLMVFCK--TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
L ++ + I + +I +F + Y DL + + + ++
Sbjct: 458 YGILAVLLSSFDKKTKKISIAIALTFVIAIFFYNYLLPKDLEV----TFLDVGQGDSTFV 513
Query: 243 NYSNPPSFIFSQWKS 257
+ +F F++W
Sbjct: 514 RTPHGKTF-FNRWGR 527
>gi|77918648|ref|YP_356463.1| DNA internalization-related competence protein ComEC/Rec2
[Pelobacter carbinolicus DSM 2380]
gi|77544731|gb|ABA88293.1| DNA internalization-related competence protein ComEC/Rec2
[Pelobacter carbinolicus DSM 2380]
Length = 785
Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 91/257 (35%), Gaps = 29/257 (11%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+L + P I + ++ P P +F + G+ I F +
Sbjct: 321 LLCTRRCCRPTHTALAIACVILVATPMALFMP-----SFQLSFAGVFGILIFLPRWSRML 375
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ W++++ I + + + + F++ HFH + GL+ N+ A P
Sbjct: 376 PD---MSMRWRRVAQIG---------MVTPAATITTTPFVLWHFHLVAPAGLLVNLWAGP 423
Query: 121 ILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIP 176
+ + ++IPAGL+ ++L M I+ + + +P
Sbjct: 424 LFAGLIIPAGLLGLILTPVWPTGAAGCF-RGMGMVTAWILGASEPLLNIPALGPRQLYLP 482
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
+S + I + ++++ R ++++ + L +P L + ++
Sbjct: 483 GSSLLLISLMVVILLL---PWRKWHALLLLTLALALGLWPAPHPEQLRV----TAFSVGQ 535
Query: 237 KNTLISNYSNPPSFIFS 253
+ L+ + ++
Sbjct: 536 GDALLVSDKAGRHYLID 552
>gi|300390222|gb|ADK10923.1| ComEC [Thermoanaerobacterium saccharolyticum]
Length = 757
Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 84/257 (32%), Gaps = 33/257 (12%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
I ++ +P A + + P LFD F + +I Y K I
Sbjct: 296 FIGRENNPINAISFAATMILFFNPL-----MLFDIGFQLSFVATLSILLLYKPIKGIVKI 350
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+S + + A + +I FH I + L+ NIL +PI+
Sbjct: 351 KS-------------EKIKEVVSATL--AAQIGTVPIIIYFFHNISIISLLPNILIVPIV 395
Query: 123 SFVVIPA---GLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPET 178
S V+ ++ ++ M S IP ++ ++I++++ S + P
Sbjct: 396 SVAVVLGFLSAILGLIYMPFS---IPLNLINIPVVEIVLYLTRIFSQIPHASISVSQPPV 452
Query: 179 SFVTIVVEFLLMVF--CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS----EKGNLV 232
+ L+++ I+ + ++ +F +L I+ +G+
Sbjct: 453 YMMLCYYAALILLSSNLSKKIKISAVSTMLFLLMAVFAINSLTPKNLEITFLDVGQGDST 512
Query: 233 ALVDKNTLISNYSNPPS 249
L +
Sbjct: 513 FLRTPDGKNILIDGGGR 529
>gi|297544364|ref|YP_003676666.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842139|gb|ADH60655.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 757
Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 21/188 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
KK++ + + + + P L+D F + AI YFY
Sbjct: 298 KKHNSINSLSFAAFLILIFNPL-----MLWDVGFQLSFVATLAILYFYKP---------- 342
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
KK+S + + I I + +FH I + ++NI+ +P+
Sbjct: 343 ---IQKKLSMLNPKIRDLI--AITFSAQIGTIPLTMYYFHYISIISFLSNIVIVPLADVA 397
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V+ L AI+ +IL + + ++ I++I + ++ IP + +
Sbjct: 398 VVLGFLSAIIGLILPFLSYFINYINIPFVEAILYITNLLNSFPYASINTIIPPLYVIVLY 457
Query: 185 VEFLLMVF 192
L + F
Sbjct: 458 YGILAVTF 465
>gi|289578091|ref|YP_003476718.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter italicus Ab9]
gi|289527804|gb|ADD02156.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter italicus Ab9]
Length = 757
Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 21/188 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
KK++ + + + + P L+D F + AI YFY
Sbjct: 298 KKHNSINSLSFAAFLILIFNPL-----MLWDVGFQLSFVATLAILYFYKP---------- 342
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
KK+S + + I I + +FH I + ++NI+ +P+
Sbjct: 343 ---IQKKLSMLNPKIRDLI--AITFSAQIGTIPLTMYYFHYISIISFLSNIVIVPLADVA 397
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V+ L AI+ +IL + + ++ I++I + ++ IP + +
Sbjct: 398 VVLGFLSAIIGLILPFLSYFINYINIPFVEAILYITNLLNSFPYASINTIIPPLYVIVLY 457
Query: 185 VEFLLMVF 192
L + F
Sbjct: 458 YGILAVTF 465
>gi|297537852|ref|YP_003673621.1| DNA internalization-like competence protein ComEC/Rec2
[Methylotenera sp. 301]
gi|297257199|gb|ADI29044.1| DNA internalization-related competence protein ComEC/Rec2
[Methylotenera sp. 301]
Length = 808
Score = 86.0 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 30/227 (13%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
I L P + PG F + ++ + Y
Sbjct: 359 SQVLAIALLIVVLLDPWAVSSPG-----FWLSFGAVAMLAYALGG--------------- 398
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ Q+ + + L+ F V IAN AIP++SFVV P
Sbjct: 399 ----RVGQAHWFQAALKTQYAVTIGMLPLLLVLFGQASVISPIANAFAIPLISFVVTPLA 454
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVTIVVEFLL 189
L+ L I + N+ + + G+ + ++ P + + ++ L
Sbjct: 455 LLGSFLPIDTPLNLSYEALEVGMLAL----KWLNQLPAAIWQQHEPAAWTLIPAMLGVLW 510
Query: 190 MVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
++ + +R +G + ++++ T P + + + G +++V
Sbjct: 511 LLLPRGFPMRWMGLLGFLPILLLVPTRPALGDMKVTVLDVGQGLSVV 557
>gi|281417316|ref|ZP_06248336.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum JW20]
gi|281408718|gb|EFB38976.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum JW20]
Length = 778
Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 86/281 (30%), Gaps = 48/281 (17%)
Query: 6 KKYDPFPAETTIEGIARL------------------SPPSGPAFPG-LFDFNFSSYYKGI 46
++P I I L + PG LF+ F +
Sbjct: 296 TGFEPSVLRAVIMAIVILVGQILKRETDIFTSIAFAAILLLLLNPGNLFNIGFQLSFAAT 355
Query: 47 SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHC 106
++ FY+ K + + + + + + + +F+
Sbjct: 356 ISLVLFYTNLK-----------NMLNFGFLPEFITDVLASTL--AAQIGVLPITVFYFNK 402
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LDIIIHIAHR 162
I + +++N++ P++ F+ I L+A+L + I ++ + L ++ +
Sbjct: 403 ISLISVLSNLIVAPVVEFITIMGSLMAVLGQ---IHIIFSVLIGYCNNALLSFVLFVTKT 459
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-------KTNIRH--IGSIMIGITIIILF 213
+ P V I F+L +F K N+++ + + I + F
Sbjct: 460 TAELPYSVITVSTPSVVLVIIYYIFILFLFWYKPKYKVKLNLKYCVLAGAVSVALIALSF 519
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
+P L +G+ + + P
Sbjct: 520 LWPKGMEVVFLDVGQGDGAFIRTCSGKTILIDGGPESAGEN 560
>gi|260592561|ref|ZP_05858019.1| ComEC/Rec2 family protein [Prevotella veroralis F0319]
gi|260535607|gb|EEX18224.1| ComEC/Rec2 family protein [Prevotella veroralis F0319]
Length = 514
Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/198 (13%), Positives = 69/198 (34%), Gaps = 14/198 (7%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ A + I + P LFD F + + +I FY + ++
Sbjct: 326 LNRERLSVNALSLTAFIMLVINPY-----SLFDIGFQLSFASVWSIMLFYPLMIAMFRKG 380
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+T + + ++ +F + + L +++A+P +
Sbjct: 381 KLLHFTIMR--------WLCSMIALSVAAQLGTLPLIVYYFDRVSLVSLPCSLIAVPCTT 432
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++ GL+ + + S ++ ++ + + H I+ + +I +S I
Sbjct: 433 LIIYMTGLLFLFAPLSSFSLFISKCLSITIEWLNNTLHWIACLPGA-SMEQIHISSLHII 491
Query: 184 VVEFLLMVFCKTNIRHIG 201
+ L+ + +IG
Sbjct: 492 LYYVALLTAWRLWSFYIG 509
>gi|328951899|ref|YP_004369233.1| ComEC/Rec2-related protein [Desulfobacca acetoxidans DSM 11109]
gi|328452223|gb|AEB08052.1| ComEC/Rec2-related protein [Desulfobacca acetoxidans DSM 11109]
Length = 804
Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 74/210 (35%), Gaps = 12/210 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ I ++ P + +F + + + Y PK+++ +
Sbjct: 341 YSILALAAFIILMTSPLQ-----FYSLSFQLSFLSVWGLIYL--SPKLLWPWQKLIVNRE 393
Query: 71 KKISSIKQSF-LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + IK+ + + + + ++ FH P YG++ N+LAIP++ VV+P
Sbjct: 394 EPPTIIKKIILWSGRALSTSVAATLATLPIVVASFHQAPTYGIVINLLAIPLIGGVVLPL 453
Query: 130 GLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
G IA+L + L + + L+ + S P
Sbjct: 454 GFIALLTSFLPLPCAAGMLWLGRFFLETTLRAIEWASSWPGVVLPLPSPTPWQTAAYFLT 513
Query: 188 L--LMVFCKTNIRHIGSIMIGITIIILFTF 215
L L+ + R IG+ + + + +
Sbjct: 514 LISLLGLKQQPWRWIGTSLGVLLLTGSLIW 543
>gi|308274661|emb|CBX31260.1| hypothetical protein N47_E47720 [uncultured Desulfobacterium sp.]
Length = 835
Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 57/157 (36%), Gaps = 7/157 (4%)
Query: 32 PGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
P LF +F + IS + +Y + + +++ + +
Sbjct: 353 PSLFMISFQLSF--ISVFFIVLGMNYTLYRKNKKDEVDKGWLPGLRRKVT--AFFLVSLF 408
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVM 149
+ ++ +F+ I + GL AN +A+P++ F V+ AGL++ L LS L
Sbjct: 409 ATIGTLPVVMYYFNRISLVGLAANCIAVPLIGFAVVSAGLLSFALHPLSIVLSVWLIKAD 468
Query: 150 AWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVV 185
+ L+ + I + + V +
Sbjct: 469 SVILEFALEILKYFAQLPFSAVKTVTPSVFEIVLYYL 505
>gi|125973124|ref|YP_001037034.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum ATCC 27405]
gi|256003919|ref|ZP_05428905.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum DSM 2360]
gi|125713349|gb|ABN51841.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum ATCC 27405]
gi|255992047|gb|EEU02143.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum DSM 2360]
Length = 778
Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 86/281 (30%), Gaps = 48/281 (17%)
Query: 6 KKYDPFPAETTIEGIARL------------------SPPSGPAFPG-LFDFNFSSYYKGI 46
++P I I L + PG LF+ F +
Sbjct: 296 TGFEPSVLRAVIMAIVILVGQILKRETDIFTSIAFAAILLLLLNPGNLFNIGFQLSFAAT 355
Query: 47 SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHC 106
++ FY+ K + + + + + + + +F+
Sbjct: 356 ISLVLFYTNLK-----------NMLNFGFLPEFITDVLASTL--AAQIGVLPITVFYFNK 402
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LDIIIHIAHR 162
I + +++N++ P++ F+ I L+A+L + I ++ + L ++ +
Sbjct: 403 ISLISVLSNLIVAPVVEFITIMGSLMAVLGQ---IHIIFSVLIGYCNNALLSFVLFVTKT 459
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-------KTNIRH--IGSIMIGITIIILF 213
+ P V I F+L +F K N+++ + + I + F
Sbjct: 460 TAELPYSVITVSTPSVVLVIIYYIFILFLFWYKPKYKVKLNLKYCVLAGAVSVALIAVSF 519
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
+P L +G+ + + P
Sbjct: 520 LWPKGMEVVFLDVGQGDGAFIRTCSGKTILIDGGPESAGEN 560
>gi|316940650|gb|ADU74684.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum DSM 1313]
Length = 766
Score = 85.6 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 86/281 (30%), Gaps = 48/281 (17%)
Query: 6 KKYDPFPAETTIEGIARL------------------SPPSGPAFPG-LFDFNFSSYYKGI 46
++P I I L + PG LF+ F +
Sbjct: 284 TGFEPSVLRAVIMAIVILVGQILKRETDIFTSIAFAAILLLLLNPGNLFNIGFQLSFAAT 343
Query: 47 SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHC 106
++ FY+ K + + + + + + + +F+
Sbjct: 344 ISLVLFYTNLK-----------NMLNFGFLPEFITDVLASTL--AAQIGVLPITVFYFNK 390
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LDIIIHIAHR 162
I + +++N++ P++ F+ I L+A+L + I ++ + L ++ +
Sbjct: 391 ISLISVLSNLIVAPVVEFITIMGSLMAVLGQ---IHIIFSVLIGYCNNALLSFVLFVTKT 447
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-------KTNIRH--IGSIMIGITIIILF 213
+ P V I F+L +F K N+++ + + I + F
Sbjct: 448 TAELPYSVITVSTPSVVLVIIYYIFILFLFWYKPKYKVKLNLKYCVLAGAVSVALIAVSF 507
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
+P L +G+ + + P
Sbjct: 508 LWPKGMEVVFLDVGQGDGAFIRTCSGKTILIDGGPESAGEN 548
>gi|304316629|ref|YP_003851774.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778131|gb|ADL68690.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 760
Score = 84.9 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/317 (14%), Positives = 98/317 (30%), Gaps = 29/317 (9%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
SI + +P A + I P LFD F + +I Y+ K +
Sbjct: 299 SIGRNNNPINAVSFAAVIILSFNPL-----MLFDIGFQLSFVATLSILLLYNPVKDMLKI 353
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
K +K+ ++ I FH + + L+ NI+ +PI+
Sbjct: 354 ---------KNEKLKEVV------SVTVAAQLGTIPITIYSFHNLSIISLLPNIIIVPIV 398
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIGRIPETSFV 181
S VI L A++ +I S I ++ + ++I+ + + + +P +
Sbjct: 399 SIAVILGFLSALIGLIFSPLAIILNMINTPIVELILFLTKIFAEIPHASINVSVPPFYMI 458
Query: 182 TIVVEFLLMVFCKTN----IRHIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALV 235
LL++ + ++ I I++ I+ + ++ + +G+ L
Sbjct: 459 IFYYTALLIMISSLSKINKLKVILLILVTSMTILFVNTLIPRNLEITFLDVGQGDSTFLR 518
Query: 236 DKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFL 295
+ ++ +S+ + + S L
Sbjct: 519 TPDGENILIDGGGRPEYN--RSSFDVGQDILLPYLLYENAASLDAIFISHTDSDHIGGIL 576
Query: 296 CIKKSFCVGCHRSDVIV 312
I V V
Sbjct: 577 SILDDVDVKRIFIGRQV 593
>gi|218780624|ref|YP_002431942.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfatibacillum alkenivorans AK-01]
gi|218762008|gb|ACL04474.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfatibacillum alkenivorans AK-01]
Length = 800
Score = 83.7 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 68/219 (31%), Gaps = 17/219 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ YD + L P P LF+ F + + I Y K I
Sbjct: 314 RDYDSLNTLGAAAVVILLWNP-----PALFNVGFQLSFTAVFCILY---GLKKIPFKTIP 365
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
TW K + I I + ++ +F I + G +AN++ +P++ F
Sbjct: 366 ITWGEKARRRV------LIYLLIPVIALLGTAPIVLHYFDRISLIGPLANLIVVPLIGFA 419
Query: 126 VIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS-FVT 182
V+P L+A L+ + + I L ++ ++ ++ + P
Sbjct: 420 VLPLALMAGLIHPILPWMSGIMTAAAGHLLQFVLLLSKWLAAVPFASAMPVKPNALEMGL 479
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
++ K M + + +
Sbjct: 480 YYAALFALINVKKKWGAALLAMCLVGGLADAGYWAHQRF 518
>gi|299822873|ref|ZP_07054759.1| competence protein EC [Listeria grayi DSM 20601]
gi|299816402|gb|EFI83640.1| competence protein EC [Listeria grayi DSM 20601]
Length = 714
Score = 83.7 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 79/263 (30%), Gaps = 37/263 (14%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
KK DPF A I P LFD F Y + I ++S
Sbjct: 267 KKIDPFTALCASGIICLFIRPMQ-----LFDVGFQLSYALTAGIILSNQKILRRFTSNWS 321
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ I++ + + HF+ I G+ N++ +P+ F
Sbjct: 322 QMFVLSWITTW------------------ISIPIVCYHFYQISWTGIFLNLIYVPLFVFF 363
Query: 126 VIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V+P ++ I ++ N M I H + + I P S + +
Sbjct: 364 VLPLSFLSFCFPIAAVYGNPLLLFME-------KITHYLGSIPYQVLITGRPHPSLIIAI 416
Query: 185 VEF--LLMVFC---KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ L + KT+ + + ++ + + + L+ L +
Sbjct: 417 LALIYLFFLLWENRKTSRYICLIAVFVLLLLSKSNWIGKVTFIDIGQGDSILIQLPNNKG 476
Query: 240 LISNYSNPP-SFIFSQWKSALIT 261
+ +F +W+
Sbjct: 477 NYLIDTGGQMAFQQEKWQKRRRD 499
>gi|327402303|ref|YP_004343141.1| ComEC/Rec2-like protein [Fluviicola taffensis DSM 16823]
gi|327317811|gb|AEA42303.1| ComEC/Rec2-related protein [Fluviicola taffensis DSM 16823]
Length = 646
Score = 83.3 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 69/194 (35%), Gaps = 21/194 (10%)
Query: 34 LFDFNFSSYY-KGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD F Y + + I K+IY S W WK + +G
Sbjct: 342 LFDIGFQLSYVALVGIFLFQTPIYKLIYVSNKPLDWIWKG-------------SAVGIAA 388
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVV--IPAGLIAILLMILSLDNIPFGVMA 150
+ + + F++ FH P Y L++NI+ + +L FVV +P L+A + + + A
Sbjct: 389 TITTTPFMLYWFHQFPNYFLLSNIVVM-LLGFVVLLLPIILMATAWIPY-FKTLIIFLTA 446
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI---GSIMIGI 207
L ++I ++ G + + + +R + G+ +
Sbjct: 447 LSLQLLILGIQWVNDIPGGVSAGFELSFVEFLVTASLIGFCAHQFLVRKLIPKGAFLALA 506
Query: 208 TIIILFTFPYSFSP 221
L ++
Sbjct: 507 LCFFLISWKREEKF 520
>gi|89068879|ref|ZP_01156261.1| competence protein [Oceanicola granulosus HTCC2516]
gi|89045460|gb|EAR51524.1| competence protein [Oceanicola granulosus HTCC2516]
Length = 199
Score = 82.9 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 35/213 (16%)
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ L++ + R + + ++ + + PDLL+SE G L ++ +
Sbjct: 2 LPLVAAGGLVLALWQGRGR---AAGLAPLLVAALLWGRAERPDLLVSESGGLAGVLTEAG 58
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ F W E + L +
Sbjct: 59 RGLSRPRGDGFAAGIWLENDGAGGTEQAIAAGRGVAAGTAHPLAGLR------------- 105
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
++ KR C +D+L+ + + C L + P +L++ GS
Sbjct: 106 ----------LLHVTGKRGLAAVTGCGGADLLVVNVIPEAPRPC---LTLDPALLRRTGS 152
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ P + +A WT H
Sbjct: 153 VAGWATPAGLRLE------SAAARAGKRLWTPH 179
>gi|313206279|ref|YP_004045456.1| comec/rec2-related protein [Riemerella anatipestifer DSM 15868]
gi|312445595|gb|ADQ81950.1| ComEC/Rec2-related protein [Riemerella anatipestifer DSM 15868]
gi|315023039|gb|EFT36052.1| Competence protein [Riemerella anatipestifer RA-YM]
gi|325336279|gb|ADZ12553.1| ComEC/Rec2-related protein [Riemerella anatipestifer RA-GD]
Length = 602
Score = 82.9 bits (203), Expect = 9e-14, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 64/220 (29%), Gaps = 29/220 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ +K + + LF F + + I +F ++ +
Sbjct: 321 LQRKPQVLDSLALAGLGILMVDTQE-----LFSVGFQLSFSAVLGIYWFNRPMIRLFPNP 375
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + T +I +FH + ++AN++ +P++
Sbjct: 376 RNKIQKL-----------LLYTFTMSTAAQLGTMPIVIYYFHQYSAWSILANLVVLPLME 424
Query: 124 FVVIPAGLIAILLMILSLDNIPFGV---MAWGLDIIIHIAHRISVAH-NEFCIGRIPETS 179
V+I L ++ ++ L + W + ++ + F +
Sbjct: 425 IVII---LSFLMTIVFGLGIYWNWLSFTYDWLIKALLWLIGFFGKIEMGYFQDIPLSIWE 481
Query: 180 FVTIVVEFLLM------VFCKTNIRHIGSIMIGITIIILF 213
V + + +R + S+++ I +
Sbjct: 482 MGVWAVGLYFLREILIRFTWRGFMRLMFSVLLFFGIKMWL 521
>gi|91784232|ref|YP_559438.1| ComEC/Rec2-related protein [Burkholderia xenovorans LB400]
gi|91688186|gb|ABE31386.1| ComEC/Rec2-related protein [Burkholderia xenovorans LB400]
Length = 801
Score = 82.9 bits (203), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 68/224 (30%), Gaps = 22/224 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI------ 59
+ G+ L P G F + ++AI + S +
Sbjct: 288 RSVARSAVLAWALGLVLLIDPWAVVSAG-----FWLSFCAVAAILFAMSGRPRVQDHEQH 342
Query: 60 -------YSSESHNTWTWKKISSIKQSFLNEIRAN--IGTYGSASASIFLIKHFHCIPVY 110
S + + +R+ + + + + + F IP+
Sbjct: 343 HDQANEGGEPSSPLPRLRAGLLRHVRGVGERLRSAAHVQFAVTVALAPLTVYWFAQIPLI 402
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-E 169
G +AN AIP +S +V PA L + L LD + V L+ + S
Sbjct: 403 GPLANAFAIPWVSLLVTPAILAGVAL-PAPLDVHAWHVAHALLEWLAAGLLWFSGPPWLL 461
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ + + + + L + + + + + +++
Sbjct: 462 WRLPQPDAWTLAAAALGVLWCLAPRGWPLRWAAPLTWLPLLMPA 505
>gi|325297465|ref|YP_004257382.1| ComEC/Rec2-like protein [Bacteroides salanitronis DSM 18170]
gi|324317018|gb|ADY34909.1| ComEC/Rec2-related protein [Bacteroides salanitronis DSM 18170]
Length = 659
Score = 82.5 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 71/186 (38%), Gaps = 20/186 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD +F + + ++ Y + ++ + WK ++ + +S +
Sbjct: 356 LFDVSFQLSFVAVLSLLLIYPFIERLF------HFRWKPLNWLWKSMA------LTMAAQ 403
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
F++ +F P Y L+AN++ P+ ++ +A++ ++ V+ +
Sbjct: 404 LGTLPFILCYFGTFPTYFLLANLVVTPLSIVIL----GLALVCLLFGAVPWLVKVLGLSV 459
Query: 154 DIIIHIAHRISVAHN----EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
+++ I + + + F ++ FLL + ++ R IG +
Sbjct: 460 ELLNGIMEWVQGLSGSQITSVYLSPVQAGVFALSLISFLLYLSRRSARRLIGVLCCTNLF 519
Query: 210 IILFTF 215
+ + F
Sbjct: 520 LGMLLF 525
>gi|134095374|ref|YP_001100449.1| putative DNA internalization-related competence protein ComEC/Rec2
(partial) [Herminiimonas arsenicoxydans]
gi|133739277|emb|CAL62326.1| Putative competence protein [Herminiimonas arsenicoxydans]
Length = 552
Score = 82.5 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/229 (15%), Positives = 69/229 (30%), Gaps = 18/229 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
G+ L P PG F + ++ I Y W
Sbjct: 97 SHVLCLALGLVVLFDPWAVLGPG-----FWLSFAAVAVILYVSVGRAAANGDAGKLRWRA 151
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
S + + F + +AN +AIP+ SF+V P
Sbjct: 152 ALQS----------ATLTQYAVTLGLVPLTVLLFGQASLVSPLANAVAIPLFSFLVTPLA 201
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVTIVVEFLL 189
L+ +L L G + + + + + +S IP F ++ +
Sbjct: 202 LLGSVL-PAPLSFWCLGFAHFLVAELAQVLNWLSGFSLAVWTVPIPDAWMFALALIGTIW 260
Query: 190 MVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
M+ + R++G ++ P + + + G +AL+ +
Sbjct: 261 MLAPRGWPARYLGLFAWLPLVLNAPAHPRAGEMWVTAFDVGQGMALLIE 309
>gi|323704215|ref|ZP_08115794.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323536281|gb|EGB26053.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 752
Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 84/258 (32%), Gaps = 33/258 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I ++ +P A + + P LFD F + +I Y K I
Sbjct: 290 MFIGRENNPINAMSFAATMILFFNPL-----MLFDIGFQLSFIATLSILLLYKPIKGIIK 344
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+S + ++ +I FH + L+ NIL +PI
Sbjct: 345 LKSEK---------------IKEVLSVTLAAQIGTIPIIIYFFHSFSIISLLPNILIVPI 389
Query: 122 LSFVVIPA---GLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPE 177
+S V+ ++ ++ M LS IP ++ ++I +++ S + P
Sbjct: 390 VSVAVVLGFLSAILGLIYMPLS---IPLNLINIPVVEIALYLTRIFSQIPHASISVSQPP 446
Query: 178 TSFVTIVVEFLLMVF--CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS----EKGNL 231
+ L+++ I+ + ++ +F +L I+ +G+
Sbjct: 447 VYMMLCYYAVLILLTSNLSKKIKISVVSTMLFLLMAVFAVNSLTPKNLEITFLDVGQGDS 506
Query: 232 VALVDKNTLISNYSNPPS 249
L+ +
Sbjct: 507 TFLMTPDGKSILIDGGGR 524
>gi|332799039|ref|YP_004460538.1| DNA internalization-related competence protein ComEC/Rec2
[Tepidanaerobacter sp. Re1]
gi|332696774|gb|AEE91231.1| DNA internalization-related competence protein ComEC/Rec2
[Tepidanaerobacter sp. Re1]
Length = 781
Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 91/261 (34%), Gaps = 42/261 (16%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ +K DP P LF +F Y + I F++ K+I
Sbjct: 310 VGRKNDPINTLCLSATFLLFMNPLT-----LFSISFQLSYAAVLGIMLFFAPLKLI---- 360
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + + I + + FL +F+ I + G + NIL IP++S
Sbjct: 361 ---------LEKLPRYLRDSIAVMVS--AQLTVWPFLAYYFNSISLIGFVTNILVIPLVS 409
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI----SVAH-NEFCIGRIPET 178
++I + I+ ++ + F M ++ IA +I S + + IP
Sbjct: 410 IILISGLISGIIGLLFTFAGPLF--MTVP-SFLLKIAEKIILINSKLPFSTIIVPAIPPI 466
Query: 179 SFVTIVVEFLLMVFC-----------KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
S V F+ +V + R I++ + +I + +F +
Sbjct: 467 SIVLY---FMFLVLMFDFVPSFGKIESRHKRLCAVILMFLALIPVIIPLKAFEVTFIDVG 523
Query: 228 KGNLVALVDKNTLISNYSNPP 248
+G+ + + ++ +
Sbjct: 524 QGDSILIQTESKKVVLIDGGG 544
>gi|161524334|ref|YP_001579346.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans ATCC 17616]
gi|160341763|gb|ABX14849.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans ATCC 17616]
Length = 819
Score = 82.2 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/327 (12%), Positives = 97/327 (29%), Gaps = 19/327 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY----FYSIPKMIYS 61
+ G L+ P G F + ++AI + ++ +
Sbjct: 339 RSVPTSAVLCAALGGVLLADPWAVLSAG-----FWLSFGAVAAILLSVAGWRAVREHEAD 393
Query: 62 SESHNTWTWKKISSIKQSFLNEIR--ANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
++S +++ L+ + A + + + F I + G + N AI
Sbjct: 394 TDSEPPGAMQRLHGWAMRALHRLADAARVQYAVTIGLAPLTAAWFAQISLSGPLGNAFAI 453
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ET 178
P +SFVV P L ++L LD + L+ ++ + R++ R+P
Sbjct: 454 PWVSFVVTPTVLAGLVL-PAPLDAAMLRLAHASLEPMMTLLARLAAWPAGVMWLRMPDAP 512
Query: 179 SFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
V V + M+ + +R + + P + L + + G +++ +
Sbjct: 513 VLVLACVGVVWMLMPRGWPLRWAAPLTWLPLVAPAPDAPPVGAFRLTVLDVGQGTSVLVE 572
Query: 238 NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI 297
F + + + + S +
Sbjct: 573 TAR-----RTLLFDAGPGAESTHAGQRIVAPSLRARGIRTLDTLVLSHADSDHTGGAPAV 627
Query: 298 KKSFCVGCHRSDVIVGVLKRKDMIRLS 324
+ V + + G + +D
Sbjct: 628 YGAVDVRQLLAGIPAGHARWRDAQAAG 654
>gi|313200421|ref|YP_004039079.1| DNA internalization-like competence protein comec/rec2
[Methylovorus sp. MP688]
gi|312439737|gb|ADQ83843.1| DNA internalization-related competence protein ComEC/Rec2
[Methylovorus sp. MP688]
Length = 749
Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 86/255 (33%), Gaps = 29/255 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + +++ + L P PG F + ++ + +
Sbjct: 295 LWLGRRFGIARVLACALLVVVLIDPWAVMAPG-----FWLSFGAVAVMAFA--------- 340
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ ++ +Q+ + +G F + + +AN +AIP+
Sbjct: 341 ----GAYRIGMLAKWRQAVHAQWAVTLGLLPLLLLL------FQQVSLVSPLANAIAIPV 390
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S V+P L LL I SL + +M + + +A +S + P S +
Sbjct: 391 VSLGVVPLALAGTLLPIDSLLWLAHALMQFVTQAMHWLA--VSRW-AVWQQQAPPAWSLL 447
Query: 182 TIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ M+ + +R +G + + ++I + +++ + G +A+V
Sbjct: 448 PAMAGIFWMLLPRGFPLRWLGWMGLLPMLLIRQEPLPDGAMRVVMLDVGQGMAVVVHTAR 507
Query: 241 -ISNYSNPPSFIFSQ 254
Y P +
Sbjct: 508 HTLLYDTGPRYSAES 522
Score = 37.5 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 29/253 (11%), Positives = 67/253 (26%), Gaps = 8/253 (3%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A + RL P G P FDF + + A GY + + + +
Sbjct: 109 IHAGERWQLTVRLKRPHGSVNPHGFDFERWALENDLQAFGYIRTRSEYRRVDDMVWRPAY 168
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ +++ I + + L+ L + + I
Sbjct: 169 V-VERVREHLNARIAQVLPGRPAMPLLQALVTGDDSGITTADWDVFLRSGVNHLISISGL 227
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIII------HIAHRISVAHNEFCIGRIPETSFVTIV 184
I +L + ++ L++++ I + G T +
Sbjct: 228 HITMLASLAYWAVYAGWRRSYRLNLLLPARKAGVILGWLVALLYSLVAGFSVPTQRTLYM 287
Query: 185 VEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ + + + +++L +P +S V I
Sbjct: 288 LTVFAIALWLGRRFGIARVLACALLVVVLIDPWAVMAPGFWLSFGAVAVMAFAGAYRIGM 347
Query: 244 YSNPPSFIFSQWK 256
+ + +QW
Sbjct: 348 LAKWRQAVHAQWA 360
>gi|189350910|ref|YP_001946538.1| competence protein [Burkholderia multivorans ATCC 17616]
gi|189334932|dbj|BAG44002.1| competence protein [Burkholderia multivorans ATCC 17616]
Length = 824
Score = 81.8 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/327 (12%), Positives = 97/327 (29%), Gaps = 19/327 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY----FYSIPKMIYS 61
+ G L+ P G F + ++AI + ++ +
Sbjct: 344 RSVPTSAVLCAALGGVLLADPWAVLSAG-----FWLSFGAVAAILLSVAGWRAVREHEAD 398
Query: 62 SESHNTWTWKKISSIKQSFLNEIR--ANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
++S +++ L+ + A + + + F I + G + N AI
Sbjct: 399 TDSEPPGAMQRLHGWAMRALHRLADAARVQYAVTIGLAPLTAAWFAQISLSGPLGNAFAI 458
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ET 178
P +SFVV P L ++L LD + L+ ++ + R++ R+P
Sbjct: 459 PWVSFVVTPTVLAGLVL-PAPLDAAMLRLAHASLEPMMTLLARLAAWPAGVMWLRMPDAP 517
Query: 179 SFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
V V + M+ + +R + + P + L + + G +++ +
Sbjct: 518 VLVLACVGVVWMLMPRGWPLRWAAPLTWLPLVAPAPDAPPVGAFRLTVLDVGQGTSVLVE 577
Query: 238 NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI 297
F + + + + S +
Sbjct: 578 TAR-----RTLLFDAGPGAESTHAGQRIVAPSLRARGIRTLDTLVLSHADSDHTGGAPAV 632
Query: 298 KKSFCVGCHRSDVIVGVLKRKDMIRLS 324
+ V + + G + +D
Sbjct: 633 YGAVDVRQLLAGIPAGHARWRDAQAAG 659
>gi|221198416|ref|ZP_03571462.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD2M]
gi|221208907|ref|ZP_03581904.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD2]
gi|221171190|gb|EEE03640.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD2]
gi|221182348|gb|EEE14749.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD2M]
Length = 818
Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/360 (12%), Positives = 100/360 (27%), Gaps = 24/360 (6%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ G L+ P G F + ++ I + + + +S
Sbjct: 340 RSVPTSAVLCAALGGVLLADPWAVLSAG-----FWLSFGAVAVILLSVAGWRAVREHDSE 394
Query: 66 --NTWTWKKISSIKQSFLNEIR--ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+++ L+ + A + + + F I + G + N LAIP
Sbjct: 395 GEPPGVMQRLHGWTMRALHRLADAARVQYAVTIGLAPLTAAWFAQISLSGPLGNALAIPW 454
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSF 180
+SFVV P L ++L LD + L+ ++ + R++ R+P
Sbjct: 455 VSFVVTPTVLAGLVL-PAPLDAAMLRLAHASLEPMMALLARLAAWPAGVMWLRMPDAPVL 513
Query: 181 VTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
V V + M+ + +R + + P + L + + G +++ +
Sbjct: 514 VLACVGVVWMLMPRGWPLRWAAPLTWLPLVAPAPDAPPIGAFRLTVLDVGQGTSVLVETA 573
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
F + + + + S +
Sbjct: 574 R-----RTLLFDAGPGAESTHAGQRIVAPSLRARGIRTLDTLVLSHADSDHTGGASAVYG 628
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ V + + G + +D + + +L G
Sbjct: 629 AAEVRQLLAGIPAGHARWRDAQAAG-------VADRVPCAAGQRWRWDGVDFTVLWPPGG 681
>gi|332306128|ref|YP_004433979.1| DNA internalization-related competence protein ComEC/Rec2
[Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173457|gb|AEE22711.1| DNA internalization-related competence protein ComEC/Rec2
[Glaciecola agarilytica 4H-3-7+YE-5]
Length = 762
Score = 80.6 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 81/206 (39%), Gaps = 16/206 (7%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LF +F + + IG+ + + + S W +
Sbjct: 337 SLFGQSFWLSFGAVLIIGFVFWRWPVKHQGFSIKGWFAG-------------MCRLQLAL 383
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM--A 150
S + F I V + N+LA+PI++ V++P L+A+++M+LSL P +M
Sbjct: 384 SLLMLPLVAWQFSFISVAAPVINLLAVPIVTLVIVPLCLLAVVMMLLSLPYWPQLMMLID 443
Query: 151 WGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
WGL +I + + + I IP ++ + L ++ + + ++ + +
Sbjct: 444 WGLQFLIEKLNIMGAWPEAAYSIQSIPAFVWLCFSIATLAVLLPRGLVSRGWPVVFCLPL 503
Query: 210 IILFTFPYSFSPDLLISEKGNLVALV 235
+ P + + + G +++V
Sbjct: 504 LTYALTPNPRDWQINVLDVGQGLSVV 529
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 71/240 (29%), Gaps = 19/240 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + P ++ +L PP G A G F + + + I A GY
Sbjct: 123 VSWARPKWPVKQGQVVQLWVKLKPPHGLANQGGFHYQQWLFSQAIMATGYV--------- 173
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV--YGL-----IA 114
N +++Q L+ + + + + H + + L IA
Sbjct: 174 KAHENNVLLVSHVTVRQRLLDSLIE-LELTTMPWIAALSLGHRGLLSPDDWSLVQRTGIA 232
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
+++AI L ++ + + L I + + +
Sbjct: 233 HLIAISGLHLALVASLCYLFIASALLFCYRVLIKTQNANFYFISVLITLVATLGYAYLAG 292
Query: 175 IPETSFVTIVVEFLLMVFCKTN--IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+ + ++ L + R ++I + I+ F +S L+
Sbjct: 293 LGLPALRAWLMLALTACLLLSRIHWRFKRILLISVGAFIVLFPLSLFGQSFWLSFGAVLI 352
>gi|300312085|ref|YP_003776177.1| transporter DNA uptake transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300074870|gb|ADJ64269.1| transporter DNA uptake transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 829
Score = 80.6 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 10/215 (4%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P +PG F + + + Y + + ++ Q
Sbjct: 379 DPWALLWPG-----FWLSFGAVGLLLYGSVGRMQPPRAMAAAASRKHWWPALVQRLKE-- 431
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
++ + + F + G IAN +AIP++S V+ P L+ +L L
Sbjct: 432 ASHAQYLVTLGLVPLTVLLFGQYSLIGPIANAVAIPLVSLVITPLALLGSVL-PTVLAQF 490
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGS 202
+ L + +S +P + + +++ R +G
Sbjct: 491 VLQLPHALLAWLAGFLQGLSAMPWAVWQTPVPSWWMFALAMGGTMLLLAPRGWPVRWLGW 550
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
++ P S + + G +A++ +
Sbjct: 551 FGWLPLLLNAPMAPAEGSMRVTAFDVGQGMAVLVE 585
>gi|146296058|ref|YP_001179829.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409634|gb|ABP66638.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 751
Score = 80.2 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 54/154 (35%), Gaps = 18/154 (11%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
+P + + + LFD F + + +I FY
Sbjct: 308 NPDTLNSLAVAAVLMLVINPLY---LFDIGFQLSFLSVLSIVIFYRR------------- 351
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ +K + L +F + + + N++A+P+ +V P
Sbjct: 352 IYEYFIKVKVPTSISSLCAVSVSAQILILPLLAYYFCEVSLISFLTNLIAVPLAGALV-P 410
Query: 129 AGLIAILLMILSLDNIPF-GVMAWGLDIIIHIAH 161
GL+ +L++ +D I V+ + ++I ++
Sbjct: 411 IGLVYYILLLFGIDFIVLKWVLLVIVKVLIWVSQ 444
>gi|221214762|ref|ZP_03587731.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD1]
gi|221165301|gb|EED97778.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD1]
Length = 823
Score = 80.2 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/362 (11%), Positives = 101/362 (27%), Gaps = 26/362 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY----FYSIPKMIYS 61
+ G L+ P G F + ++ I + ++ +
Sbjct: 343 RSVPTSAVLCAALGGVLLADPWAVLSAG-----FWLSFSAVAVILLSVAGWRAVREHEAD 397
Query: 62 SESHNTWTWKKISSIKQSFLNEIR--ANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
++ +++ L+ + A + + + F I + G + N AI
Sbjct: 398 TDGEPPGAMRRLHMWAMRALHRLADAARVQYAVTIGLAPLTAAWFAQISLSGPLGNAFAI 457
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ET 178
P +SFVV P L ++L LD + L+ ++ + R++ R+P
Sbjct: 458 PWVSFVVTPTVLAGLVL-PAPLDAAMLRLAHASLEPMMTLLARLAAWPAGVMWLRMPDAP 516
Query: 179 SFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
V V + M+ + +R + + P + L + + G +++ +
Sbjct: 517 VLVLACVGVVWMLMPRGWPLRWAAPLTWLPLVAPAPDAPPIGAFRLTVLDVGQGTSVLVE 576
Query: 238 NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI 297
F + + + + S +
Sbjct: 577 TAR-----RTLLFDAGPGAESTHAGQRIVAPSLRARGIRTLDTLVLSHADSDHTGGAPAV 631
Query: 298 KKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQ 357
+ V + + G + +D + + + +L
Sbjct: 632 YGAADVRQLLAGIPAGHARWRDAQAAG-------VADRVPCAAEQRWRWDGVDFTVLWPP 684
Query: 358 GS 359
G
Sbjct: 685 GG 686
>gi|186476201|ref|YP_001857671.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia phymatum STM815]
gi|184192660|gb|ACC70625.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia phymatum STM815]
Length = 843
Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 72/230 (31%), Gaps = 20/230 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ P G+ L P G F + + AI + S I + S
Sbjct: 338 RRVAPSVVLAWALGLVLLVDPWAVVSAG-----FWLSFCAVGAILFAMSGHARIARNTSR 392
Query: 66 NTWTWKKISSIKQSFLNEIRANIG-------------TYGSASASIFLIKHFHCIPVYGL 112
+ + + + +R IG + + + + F IP+ G
Sbjct: 393 DAGLEEGERTFVMRCGDALRLCIGGLNERIRSGARVQLAVTIALAPLTVCFFSQIPLIGP 452
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFC 171
AN AIP +S +V PA + + L D + F L+ ++ S A +
Sbjct: 453 FANAFAIPWVSVLVTPAVIAGVAL-PAPFDALAFRAAHHLLECLVAGLQLFSSAAWTLWP 511
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + + + V + + + + ++ + +
Sbjct: 512 LPQPSAWALASAGVGVAWCLAPPGWPLRWAAPLTWLPLLAPASGAPAEGA 561
>gi|253998347|ref|YP_003050410.1| DNA internalization-like competence protein ComEC/Rec2
[Methylovorus sp. SIP3-4]
gi|253985026|gb|ACT49883.1| DNA internalization-related competence protein ComEC/Rec2
[Methylovorus sp. SIP3-4]
Length = 793
Score = 79.5 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 86/256 (33%), Gaps = 31/256 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + +++ + L P PG F + ++ + +
Sbjct: 339 LWLGRRFGIARVLACALLVVVLIDPWAVMAPG-----FWLSFGAVAVMAFA--------- 384
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ ++ +Q+ + +G F + + +AN +AIP+
Sbjct: 385 ----GAYRIGMLAKWRQAVHAQWAVTLGLLPLLLLL------FQQVSLVSPLANAIAIPV 434
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSF 180
+S V+P L LL I SL + +M + H ++V+ + P S
Sbjct: 435 VSLGVVPLVLAGTLLPIDSLLWLAHALMQVVTQAM----HWLAVSPWAVWQQQAPPAWSL 490
Query: 181 VTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ + M+ + +R +G + + ++I + +++ + G +A+V
Sbjct: 491 LPAMAGIFWMLLPRGFPLRWLGWMGLLPMLLIRPEPLPDGAMRVVMLDVGQGMAVVVHTA 550
Query: 240 L-ISNYSNPPSFIFSQ 254
Y P +
Sbjct: 551 RHTLLYDTGPRYSAES 566
Score = 36.7 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 29/253 (11%), Positives = 67/253 (26%), Gaps = 8/253 (3%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A + RL P G P FDF + + A GY + + + +
Sbjct: 153 IHAGERWQLTVRLKRPHGSVNPHGFDFERWALENNLQAFGYIRTRSEYRPLDDMVWRPAY 212
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ +++ I + + L+ L + + I
Sbjct: 213 V-VERVREHLNARIAQVLPGRPAMPLLQALVTGDDSGITTADWDVFLRSGVNHLISISGL 271
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIII------HIAHRISVAHNEFCIGRIPETSFVTIV 184
I +L + ++ L++++ I + G T +
Sbjct: 272 HITMLASLAYWAVYAGWRRSYRLNLLLPARKAGVILGWLVALLYSLVAGFSVPTQRTLYM 331
Query: 185 VEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ + + + +++L +P +S V I
Sbjct: 332 LTVFAIALWLGRRFGIARVLACALLVVVLIDPWAVMAPGFWLSFGAVAVMAFAGAYRIGM 391
Query: 244 YSNPPSFIFSQWK 256
+ + +QW
Sbjct: 392 LAKWRQAVHAQWA 404
>gi|300775956|ref|ZP_07085815.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
gi|300505089|gb|EFK36228.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
Length = 592
Score = 78.7 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 71/191 (37%), Gaps = 17/191 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + +K D + ++ LFD F + + I ++ + P + Y
Sbjct: 309 ILLQRKSDLLHSLALSAFFILIADTQQ-----LFDVGFQLSFLAVLGI-FWLNQPLLKYF 362
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ S IK+ N I + + ++ +FH + +IAN + +P
Sbjct: 363 P--------RQDSYIKKILFNTI--TVSLSAQLATLPVVLYYFHQFSLISIIANFVIVPF 412
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+++ + L+ L+ + + + + + I++ + H + F IP
Sbjct: 413 SEIIIVFSFLMTALISASADFELINRLYDFVIQILLKMIHWFAEVDVLF-FENIPMNGIE 471
Query: 182 TIVVEFLLMVF 192
+ V ++ +
Sbjct: 472 VLSVSVVIFLL 482
>gi|109898099|ref|YP_661354.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoalteromonas atlantica T6c]
gi|109700380|gb|ABG40300.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoalteromonas atlantica T6c]
Length = 762
Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 87/223 (39%), Gaps = 19/223 (8%)
Query: 19 GIARLSPPSG--PAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
G L S FP LF +F + +S IG+ + + + S TW
Sbjct: 320 GRILLVGVSAFIVLFPLSLFGQSFWLSFGAVSIIGFVFWRWPVRHRGFSIKTWFAS---- 375
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ S + F + V + N++A+P+++ +++P L+ ++
Sbjct: 376 ---------MCRLQLALSLLMLPLVAWQFSFVSVVSPVINLVAVPVVTLIIVPMCLLGVI 426
Query: 136 LMILSLDNI--PFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVF 192
+M+LS+ F ++ GL ++ + F I IP +V + L +
Sbjct: 427 MMLLSIPYWKHVFTLVDVGLQFLLDKLSLMESWSGAAFSIQAIPGIVWVCFTIAALTFLL 486
Query: 193 CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+ I + ++++ I ++ P + + + G +++V
Sbjct: 487 PRGLIPRLLALVLCIPLLTFGLTPAKRDWQINVLDVGQGLSVV 529
>gi|77166130|ref|YP_344655.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus oceani ATCC 19707]
gi|76884444|gb|ABA59125.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus oceani ATCC 19707]
Length = 784
Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 63/194 (32%), Gaps = 15/194 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY-FYSIPKMIYSSESHNTWT 69
A + L P PG F + ++ + + + + +
Sbjct: 327 SRALAFALILVLLWDPLSVLSPG-----FWLSFGAVAVLTFGLTGQRPLPGTKTPGFSSL 381
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + + + + L+ F + + + N++A+P + F+V+P
Sbjct: 382 SSYLEHFWRRWGKA-----QWVVAIGLAPILLYQFQRLSLIAPVTNLVAVPWMGFLVVPP 436
Query: 130 GLIA-ILLMILSLDNIPFGVMAWGLDIIIH-IAHRISVAHNE-FCIGRIPETSFVTIVVE 186
L+ ILL+ L + L ++ I S + P + + ++
Sbjct: 437 LLLGTILLIPFPLLGTALISLGDYLLALLWNILAWCSTLPVAQWEHAGPPLWALLPAILG 496
Query: 187 FLLMVFCKT-NIRH 199
LL++ + R
Sbjct: 497 SLLLLAPRGLPGRW 510
>gi|254435348|ref|ZP_05048855.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus oceani AFC27]
gi|207088459|gb|EDZ65731.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus oceani AFC27]
Length = 778
Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 63/194 (32%), Gaps = 15/194 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY-FYSIPKMIYSSESHNTWT 69
A + L P PG F + ++ + + + + +
Sbjct: 321 SRALAFALILVLLWDPLSVLSPG-----FWLSFGAVAVLTFGLTGQRPLPGTKTPGFSSL 375
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + + + + L+ F + + + N++A+P + F+V+P
Sbjct: 376 SSYLEHFWRRWGKA-----QWVVAIGLAPILLYQFQRLSLIAPVTNLVAVPWMGFLVVPP 430
Query: 130 GLIA-ILLMILSLDNIPFGVMAWGLDIIIH-IAHRISVAHNE-FCIGRIPETSFVTIVVE 186
L+ ILL+ L + L ++ I S + P + + ++
Sbjct: 431 LLLGTILLIPFPLLGTALISLGDYLLALLWNILAWCSTLPVAQWEHAGPPLWALLPAILG 490
Query: 187 FLLMVFCKT-NIRH 199
LL++ + R
Sbjct: 491 SLLLLAPRGLPGRW 504
>gi|229825120|ref|ZP_04451189.1| hypothetical protein GCWU000182_00471 [Abiotrophia defectiva ATCC
49176]
gi|229790492|gb|EEP26606.1| hypothetical protein GCWU000182_00471 [Abiotrophia defectiva ATCC
49176]
Length = 810
Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 65/153 (42%), Gaps = 19/153 (12%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
P+ + I +S + F +F ++ IG FY +P+++Y +
Sbjct: 291 LPSGLALAAIVIMSINHRVIYQSGFQLSF------LAVIGIFYIMPELMYIFNVQ-SLNT 343
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
K I+ + L+ I ++ + + ++ +F+ I + G++ NI+ IP++S +V+
Sbjct: 344 KGINKLAYVILSSIICSVSI--NLATLPVILINFYEISLLGIVLNIIVIPLMSVLVVTGL 401
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
+ +I + I+ IA+ I
Sbjct: 402 IGGFTALIFEMAG----------RFILGIAYYI 424
>gi|326201893|ref|ZP_08191763.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium papyrosolvens DSM 2782]
gi|325987688|gb|EGD48514.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium papyrosolvens DSM 2782]
Length = 785
Score = 77.5 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 81/259 (31%), Gaps = 33/259 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ++ + + + + I + P LFD F + ++ FY K
Sbjct: 315 IMREPEIYTSISASALIILIINPYT-----LFDIGFQLSFGATLSLVLFYPRIKSFTEG- 368
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
I + + A + + +F+ + +I+NIL +P++
Sbjct: 369 ----------KYIPNVVSDTLAATV--AAQLGVIPVTLYYFNNFSTFSIISNILVVPLVE 416
Query: 124 FVVIPA-GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
FV I ++ L+ + L I + L I+ I + F + ++P +
Sbjct: 417 FVTIIGFIMVFTGLLNIYLAVIIGYINNTFLSFILFITEVTAKIP--FSLLKLPTPTLGM 474
Query: 183 IVVEFLLMV-FCKTN-----------IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
++ +L ++ K ++ I+ I P L +G+
Sbjct: 475 VLFYYLFIIYMFKGRNYFKVKKYTKHLKRAVVILTIIIFGAKALIPKPLEITFLDVGQGD 534
Query: 231 LVALVDKNTLISNYSNPPS 249
+ +
Sbjct: 535 SAFIKTAHGTKILIDGGGR 553
>gi|301063473|ref|ZP_07204005.1| DNA internalization competence protein ComEC/Rec2-like protein
[delta proteobacterium NaphS2]
gi|300442412|gb|EFK06645.1| DNA internalization competence protein ComEC/Rec2-like protein
[delta proteobacterium NaphS2]
Length = 751
Score = 77.5 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/225 (17%), Positives = 83/225 (36%), Gaps = 11/225 (4%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + K+ D + + I P P +F + ++ I + + P +
Sbjct: 252 IVLGKEKDVWSTFSLAGLIILFLDPGALFTP-----SFQLSFVAVTGIL-WLTPPILKRL 305
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + A + + +FH IP+ + AN+ IPI
Sbjct: 306 GVRTHERSEYRSRGRSIFNYAAGLATVSFCALYFLLPLTVYYFHRIPLVSVPANLSTIPI 365
Query: 122 LSFVVIPAGLIAILLMILSLD--NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET- 178
L V+P GL+++LL+ SL + + AWGLDI++ + + P+
Sbjct: 366 LGLWVLPLGLLSVLLLPFSLQVASFLLHMSAWGLDIMMGVVAFWASIPWASIWTVTPDFF 425
Query: 179 --SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ F+ F K R + +I +T++ + + +
Sbjct: 426 ETGLFYALTFFVFFAFQKKWARMGLAAIIFLTVMDVAFWIHRVRF 470
>gi|310779220|ref|YP_003967553.1| ComEC/Rec2-related protein [Ilyobacter polytropus DSM 2926]
gi|309748543|gb|ADO83205.1| ComEC/Rec2-related protein [Ilyobacter polytropus DSM 2926]
Length = 553
Score = 77.5 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 85/245 (34%), Gaps = 24/245 (9%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
K DP + + I+ + P +F + + AI + Y + +S
Sbjct: 260 KPDPKKSLSAAFVISLMINPVSVME-----LSFQMSFMAVVAIIFIYPKVEKKLNSSVRG 314
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ K + + A + + + +F IP+ + N++AIP+ +
Sbjct: 315 GFIKKVL----------LFAAMSLTIQIFLTPIFLVYFRTIPILSFLVNLVAIPL-GVLF 363
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVV 185
+ A++L ++ L I + I++ S I ++ + ++
Sbjct: 364 VQNAFGALVLSVVGLGGILMPTVNLSYHILLKFIEITSNIPALSVNYYGIKKSGMIILLY 423
Query: 186 EFLL-MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+ M F + + + I + I + I P++L + +V +K ++ +
Sbjct: 424 SVIFGMAFLRGRWKGLSVIPLFILLFI----DGPDPPEIL--DYKGIVYYREKPGILVSG 477
Query: 245 SNPPS 249
Sbjct: 478 KRISD 482
>gi|333029263|ref|ZP_08457324.1| ComEC/Rec2-related protein [Bacteroides coprosuis DSM 18011]
gi|332739860|gb|EGJ70342.1| ComEC/Rec2-related protein [Bacteroides coprosuis DSM 18011]
Length = 692
Score = 76.8 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 81/249 (32%), Gaps = 26/249 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS ++ + + + I L P+ LFD F + + +I F +Y
Sbjct: 321 LSTQRRGNSINSLAFVAIIMLLYNPNW-----LFDVGFQLSFSAVLSILLFSRPTLELYH 375
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+S I S +I +F P Y L+AN++ IP+
Sbjct: 376 PKSKIG------------IYLWSSLVISLVAQLGTSPLIIYYFGSFPTYFLLANLIVIPL 423
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSF 180
++ ++ + + SL ++ + + + + S + I
Sbjct: 424 ITILLYILVVSVLTYACTSLSSVLLLIAIHLTEWLNGVVRMFSTLPLSSIKSLYINTFEL 483
Query: 181 VTIVVEFLLM--VFCKTNIRHIGSIM------IGITIIILFTFPYSFSPDLLISEKGNLV 232
+ + + + ++ + I+ I +++ S L + V
Sbjct: 484 TLLYAILFFVYKLIFSSRVKWLYCILSFSFLFISCRLVLNELNKPHVSMQLYCNGNKPFV 543
Query: 233 ALVDKNTLI 241
V+++ L+
Sbjct: 544 ECVEEDGLL 552
>gi|303239327|ref|ZP_07325855.1| DNA internalization-related competence protein ComEC/Rec2
[Acetivibrio cellulolyticus CD2]
gi|302593113|gb|EFL62833.1| DNA internalization-related competence protein ComEC/Rec2
[Acetivibrio cellulolyticus CD2]
Length = 811
Score = 76.8 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 66/213 (30%), Gaps = 33/213 (15%)
Query: 1 MLSITKKYDPFPAETTIEGIARLS--------------PPSGPAF----PG-LFDFNFSS 41
+ ++ ++P I L + PG LF+ F
Sbjct: 313 IFTLITGFEPSVLRAVIMAAVILIGQIIWRETEVFTSISFAALLLLFYNPGILFNIGFQL 372
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ ++ FY K S + ++ + A I +
Sbjct: 373 SFAATISLVLFYKYIKEKLS-----------FKFLPSFVVDVLAATIS--AQIGVLPITV 419
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIA 160
+F+ + V +++N+L +PI+ F+ I L+A+L I + L + + L ++ +
Sbjct: 420 FYFNKVSVVSILSNLLVVPIVEFITILGSLMALLGQIHVGLSILIGYINNVLLSFVLLVT 479
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ P V + F
Sbjct: 480 KFSASMPWSVITLTTPSVILVICYYAAITYFFW 512
>gi|218512643|ref|ZP_03509483.1| hypothetical protein Retl8_02596 [Rhizobium etli 8C-3]
Length = 258
Score = 76.4 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM------IYSSE 63
PF I G ARL+PP+GPA PGL DF+F +Y+ GI A G+FY P+ +
Sbjct: 30 PFEIGDIITGRARLTPPAGPALPGLNDFSFGAYFDGIGANGFFYRAPEKVDLQAGPPAVT 89
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANI 116
S + + + ++ + IR+ + A A+ + I +A+I
Sbjct: 90 STSDALLEWLYRLRSGIGDRIRSMLPGDTGAFAAALVTDERRAISKETTEALRQSGLAHI 149
Query: 117 LAIPILSFVVIPAGLIAILLMILSL 141
+AI L+ + M+LSL
Sbjct: 150 VAISGLNMALSAGIFFVGFRMLLSL 174
>gi|170077449|ref|YP_001734087.1| competence protein [Synechococcus sp. PCC 7002]
gi|169885118|gb|ACA98831.1| competence protein [Synechococcus sp. PCC 7002]
Length = 730
Score = 76.4 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 78/283 (27%), Gaps = 31/283 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + +K P + L P L+D F + +
Sbjct: 324 LVLDRKVKPIGLLLMTATVLLLIKPLW-----LWDLGFQLSFLATFGLF----------- 367
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ KK+ + + I I S L F+ I Y + +I+ P+
Sbjct: 368 --TTLEPLQKKLDFLPPTVATAI--AIPMAASIWTLPLLAYKFNVIATYSIPTSIVLSPV 423
Query: 122 LSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ V + + + +++ L + W L +I + ++
Sbjct: 424 IGLVSLGGMVSGAVGLLIPELGGAIAYGLGWPLRGMIWLVEQVVALPGSQASVAALPLPQ 483
Query: 181 VTIVVEFLLMVFCKTNIR------HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL 234
+ + ++++ ++ IG ++I ++++ + + + ++
Sbjct: 484 LLVFYG-VMLLIWRSPWAQKQARPLIGGLLILFVTVLVYRHFNTTQVTIFGDRQTPIIVA 542
Query: 235 VDKNTLISNYSNPPSF---IFSQWKSALITPFHEAPHVQKEDL 274
+ P F + +
Sbjct: 543 QAGGKTLVINVGSPGFWEYTLEPFLRRSGLNQIDGLLSLTPPD 585
>gi|114799405|ref|YP_760489.1| hypothetical protein HNE_1785 [Hyphomonas neptunium ATCC 15444]
gi|114739579|gb|ABI77704.1| hypothetical protein HNE_1785 [Hyphomonas neptunium ATCC 15444]
Length = 258
Score = 76.4 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/275 (11%), Positives = 79/275 (28%), Gaps = 44/275 (16%)
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC--IGRIP 176
+P+++FV PA + ++L + ++ L++++ + H +P
Sbjct: 1 MPVVTFVTAPAAALTVILALFGHAEFGLKLLGQSLELVLTMTHYFYNLSPGVVRMPVPMP 60
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
+ V + + M+ R IG ++ I L+ +S V + +
Sbjct: 61 PMALVFLSLSLGAMMAFAGWARLIGGALLLAPAIWLWGHAPKVVMHWSVSGD---VYIAN 117
Query: 237 KNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLC 296
+ ++ E L + + + S C
Sbjct: 118 PDGMV------------------------------ERLSLTDGDGMAPLRFSEVSDATAC 147
Query: 297 IKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQK 356
CV S + V + D + + + T+ + + L + +++
Sbjct: 148 DD-EVCVYPSFSGLRVRTNGQPDKSKEDTEQAT-SQLTVAIEASAQADSDLAFSWTDVRE 205
Query: 357 QGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
G + + I W +
Sbjct: 206 AGGITVYAKDGH-------LNIVRIQNCTERRWRR 233
>gi|307609424|emb|CBW98913.1| hypothetical protein LPW_07001 [Legionella pneumophila 130b]
Length = 735
Score = 76.4 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 80/250 (32%), Gaps = 30/250 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+++ P+ + P G F + ++ + +
Sbjct: 300 KQRFTPWQIWRYALFLVLCIEPHAVFLQG-----FYFSFLAVACLLL------------T 342
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
H W K + + + + G +AN+ AIP++SF
Sbjct: 343 HQRWPLKNYKK---------TLALQLSCLIGLMPLTLHWYSYGSINGFLANLFAIPLVSF 393
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+++P L+ ++ I +AW + +++ + I + + +
Sbjct: 394 LIVPLALMTMITSPFHWSWILMKPLAWLVALLLQGLTYVEQIAGINITWSITSVTMMLAM 453
Query: 185 VEFLLM--VFCKTNIRHIGSIMIGITIII--LFTFPYSFSPDLLISEKGNLVALVDKNTL 240
L + + +H+ + I + + +P ++L +G VA+ ++ +
Sbjct: 454 TAGLFLRVLLPVKPFKHLAILWIILPLFPPRTAIYPGEALINILDVGQGLAVAIQTQHHV 513
Query: 241 ISNYSNPPSF 250
+ + F
Sbjct: 514 LLYDTGDSYF 523
>gi|253996016|ref|YP_003048080.1| DNA internalization-like competence protein ComEC/Rec2
[Methylotenera mobilis JLW8]
gi|253982695|gb|ACT47553.1| DNA internalization-related competence protein ComEC/Rec2
[Methylotenera mobilis JLW8]
Length = 795
Score = 76.4 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 64/213 (30%), Gaps = 30/213 (14%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P G F + ++ + +
Sbjct: 356 DPWAVIAAG-----FWLSFGAVALLSFVMGARLAPPH-------------------WLSA 391
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+ L+ FH + +AN +AIP++SF V P L+ L + +
Sbjct: 392 ALRTQWAVTIGMLPLLLIMFHQASIISPLANAIAIPLISFFVTPLALLGSFLPM----DW 447
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSFVTIVVEFLLMVFCKTN-IRHIGS 202
P + LD + ++ P + + + M+ + +R +G
Sbjct: 448 PLHLAYSLLDACVVFLRWLNQLPVAVWQQHAPAGWTLAPALFGVVWMLLPRGWPLRWLGV 507
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+ + ++I P + + + G +++V
Sbjct: 508 LGLLPMLLIQPDRPMPGDMKVTVLDVGQGLSVV 540
>gi|296158319|ref|ZP_06841150.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. Ch1-1]
gi|295891263|gb|EFG71050.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. Ch1-1]
Length = 863
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 22/224 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI------ 59
+ G+ L P G F + ++AI + S +
Sbjct: 412 RNVARSAVLAWALGLVLLIDPWAVVSAG-----FWLSFCAVAAILFAMSGRPRVQDHEQH 466
Query: 60 -------YSSESHNTWTWKKISSIKQSFLNEIRAN--IGTYGSASASIFLIKHFHCIPVY 110
S + + + +R+ + + + + + F IP+
Sbjct: 467 HDPANEGGEPSSQLSGLCAGLLRRVRGAGERLRSAAHVQFAVTVALAPLTVYWFTQIPLI 526
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-E 169
G +AN AIP +S +V PA L ++L LD + V L+ + R+S
Sbjct: 527 GPLANAFAIPWVSLLVTPAILAGVVL-PAPLDVHAWHVAHALLEWLAAGLQRLSGPAWLL 585
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ + + + + + + + + + +++
Sbjct: 586 WRLPQPDTWALAAAALGVFWCLAPRGWPLRWAAPLTWLPLLMPA 629
>gi|54293610|ref|YP_126025.1| hypothetical protein lpl0663 [Legionella pneumophila str. Lens]
gi|53753442|emb|CAH14897.1| hypothetical protein lpl0663 [Legionella pneumophila str. Lens]
Length = 735
Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 80/250 (32%), Gaps = 30/250 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+++ P+ + P G F + ++ + +
Sbjct: 300 KQRFTPWQIWRYALFLVLCIEPHAVFLQG-----FYFSFLAVACLLL------------T 342
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
H W K + + + + G +AN+ AIP++SF
Sbjct: 343 HQRWPLKNYKK---------TLALQLSCLIGLMPLTLHWYSYGSINGFLANLFAIPLVSF 393
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+++P L+ ++ I +AW + +++ + I + + +
Sbjct: 394 LIVPLALMTMITSPFHWSWILMKPLAWLVALLLQGLTYVEQIAGINITWSITSVTMMLAM 453
Query: 185 VEFLLM--VFCKTNIRHIGSIMIGITIII--LFTFPYSFSPDLLISEKGNLVALVDKNTL 240
L + + +H+ + I + + +P ++L +G VA+ ++ +
Sbjct: 454 TAGLFLRVLLPVKPFKHLAILWIILPLFPPRTAIYPGEALINILDVGQGLAVAIQTQHHV 513
Query: 241 ISNYSNPPSF 250
+ + F
Sbjct: 514 LLYDTGDSYF 523
>gi|171059289|ref|YP_001791638.1| DNA internalization-like competence protein ComEC/Rec2 [Leptothrix
cholodnii SP-6]
gi|170776734|gb|ACB34873.1| DNA internalization-related competence protein ComEC/Rec2
[Leptothrix cholodnii SP-6]
Length = 833
Score = 76.0 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/311 (12%), Positives = 95/311 (30%), Gaps = 25/311 (8%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
P T + L P PG F + ++ +G +
Sbjct: 345 PAPVVLLTCAAAVVLL-DPWALLQPG-----FWLSFVAVALLGGSTPASAGAERPQGF-- 396
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+++ + + R+ S + + + F+ + GL+AN LAIP+++ ++
Sbjct: 397 -----VATARAALHAGWRSQW--VASIGLAPWTLIFFNQVSAVGLLANSLAIPLVTLLIT 449
Query: 128 PAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVV 185
P L+ +L+ P +A G ++ ++ ++ + + P +
Sbjct: 450 PLALLGVLM-------PPCWSLAAGLIESMMVALQWLAGWPGASWQVPAAPAWAQCLGAA 502
Query: 186 EFLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
L++ +R +G + + L P + DLL + G A++ + +
Sbjct: 503 GAALLILPWPVAVRLLGGAFLLPMLWPLVPRPPAGDFDLLGVDVGQGNAVLVRTARHTLL 562
Query: 245 SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVG 304
+ + + + + L S +
Sbjct: 563 YDAGPLYGRESDAGERVLVPLLAALGERRLDLLMLSHRDADHTGGAAAVLAGPGAVRVMS 622
Query: 305 CHRSDVIVGVL 315
++ L
Sbjct: 623 SLEPGHVLRAL 633
>gi|189461478|ref|ZP_03010263.1| hypothetical protein BACCOP_02137 [Bacteroides coprocola DSM 17136]
gi|189431812|gb|EDV00797.1| hypothetical protein BACCOP_02137 [Bacteroides coprocola DSM 17136]
Length = 654
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 21/223 (9%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ F A T I + P LFD F + + I FY + +S
Sbjct: 335 RFSGFSALTLTAFIMLIYQPMY-----LFDVGFQLSFMAVLGIFLFYPL------IDSLF 383
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
K ++ + ++ + ++ +F PVY L++N++ PI F++
Sbjct: 384 VVRNKIVAYLWNII------SLSLSAQLATLPLILYYFGTFPVYFLLSNLVVAPIAVFIL 437
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR---IPETSFVTI 183
L L + N + + + + + +I + + + +
Sbjct: 438 SATLLALALGVFPVAANFVVQGLDFAVRTLNEVMEQIQHWSGAQITSAYLSVWQAWLLAV 497
Query: 184 VVEFLL-MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ L V C+ R I ++ +I+ F + I
Sbjct: 498 AIVTLWRYVVCRNARRLIVFLLTVNVLIVSFLWKQRELAGAYI 540
>gi|170703289|ref|ZP_02894084.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria IOP40-10]
gi|170131799|gb|EDT00332.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria IOP40-10]
Length = 828
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 71/247 (28%), Gaps = 18/247 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ G L+ P G F + ++ I + + + +
Sbjct: 344 RSVPTSAVLCAALGGVLLADPWAVLSAG-----FWLSFGAVAVILMAVAGWRAVREFDGD 398
Query: 66 NT----------WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
++ W +I + + + + F I V G + N
Sbjct: 399 DSAPDGAAAVDRWRRLRIGCTRAGRRIAEATRVQYAVTLGLAPLTAAWFAQISVSGPLGN 458
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
AIP +S VV P L I L LD F + L+ ++ + ++ R+
Sbjct: 459 AFAIPWVSSVVTPIVLAGIGL-PAPLDAYAFRLAHAALEPMMALLRHLADWPAGVFWLRM 517
Query: 176 PETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
P+ + + + R + + P L + + G +
Sbjct: 518 PDWPVLVLACVGVGWALMPRGWPLRWAAPLTWLPLVAPAPDAPLPGGFRLTVLDVGQGAS 577
Query: 234 LVDKNTL 240
++ +
Sbjct: 578 VLVETAR 584
>gi|187924541|ref|YP_001896183.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia phytofirmans PsJN]
gi|187715735|gb|ACD16959.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia phytofirmans PsJN]
Length = 929
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 71/224 (31%), Gaps = 22/224 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI------ 59
+ G+ + P G F + ++AI Y S +
Sbjct: 416 RNVPRSAVLAWALGLVLVVDPWAVVSAG-----FWLSFCAVAAILYAMSGRPHVQDHEQH 470
Query: 60 ---YSSESHNTWTWKKISSIKQSFLN------EIRANIGTYGSASASIFLIKHFHCIPVY 110
+ + W ++ + + L A + + + + I F IP+
Sbjct: 471 RDETADDGAAASRWSRLVIVLRRRLRDAGARLRSAAQVQFAVTIALAPLTIYWFAQIPLI 530
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-E 169
G +AN AIP +S +V PA L + L D + LD++ +S
Sbjct: 531 GPLANAFAIPWVSLLVTPAVLAGVAL-PAPFDAYAWHGAHALLDLLAVGLQALSGPAWTL 589
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ + + + V L + + + + + ++I
Sbjct: 590 WRLPQPDAWTLAAAAVGVLWCLAPRGWPLRWAAPLTWLPLLIPA 633
>gi|323526601|ref|YP_004228754.1| DNA internalization-like competence protein ComEC/Rec2
[Burkholderia sp. CCGE1001]
gi|323383603|gb|ADX55694.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. CCGE1001]
Length = 964
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/234 (14%), Positives = 72/234 (30%), Gaps = 26/234 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ G+ L P G F + ++AI Y S I E
Sbjct: 361 RNVPRSAVLAWALGLVLLIDPWAVVSAG-----FWLSFCAVAAILYATSGRPRIQDHEQH 415
Query: 64 ---------------SHNTWTWKKISSIKQSFLNEI--RANIGTYGSASASIFLIKHFHC 106
S + + ++F + A++ + + + + F
Sbjct: 416 TDEIDEASGLGTGRASRWSRLRAAAARRLRAFGERLHGAAHVQLAVTLALAPLTVYWFAQ 475
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
IP+ G +AN AIP +S +V P+ L ++L LD + LD ++ +S
Sbjct: 476 IPLIGPLANAFAIPWVSVLVTPSVLAGLVL-PAPLDAFALRLAHGLLDAMMAGLQWLSGP 534
Query: 167 HNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ + + + L + + + + + ++
Sbjct: 535 RWALWWLPQPDGWTLAAAAAGVLWCLAPRGWPLRWAAPLTWLPLVAAAPSGPPH 588
>gi|52840863|ref|YP_094662.1| DNA uptake/competence protein ComA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296649|ref|YP_123018.1| hypothetical protein lpp0680 [Legionella pneumophila str. Paris]
gi|52627974|gb|AAU26715.1| DNA uptake/competence protein ComA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750434|emb|CAH11828.1| hypothetical protein lpp0680 [Legionella pneumophila str. Paris]
Length = 735
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 80/250 (32%), Gaps = 30/250 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+++ P+ + P G F + ++ + + + ++
Sbjct: 300 KQRFTPWQIWRYALFLVLCIEPHAVFLQG-----FYFSFLAVACLLLTHQRWPLKNYKKT 354
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + + G +AN+ AIP++SF
Sbjct: 355 ---------------------LALQLSCLIGLMPLTLHWYSYGSINGFLANLFAIPLVSF 393
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+++P L+ ++ I +AW + +++ + I + + +
Sbjct: 394 LIVPLALMTMITSPFHWSWILMKPLAWLVALLLQGLTYVEQIAGINITWSITSVTMMLAM 453
Query: 185 VEFLLM--VFCKTNIRHIGSIMIGITIII--LFTFPYSFSPDLLISEKGNLVALVDKNTL 240
L + + +H+ + I + + +P ++L +G VA+ ++ +
Sbjct: 454 TAGLFLRVLLPVKPFKHLAILWIILPLFPPRTAIYPGEALINILDVGQGLAVAIQTQHHV 513
Query: 241 ISNYSNPPSF 250
+ + F
Sbjct: 514 LLYDTGDSYF 523
>gi|260590117|ref|ZP_05856030.1| DNA internalization-related competence protein ComEC/Rec2 [Blautia
hansenii DSM 20583]
gi|260539629|gb|EEX20198.1| DNA internalization-related competence protein ComEC/Rec2 [Blautia
hansenii DSM 20583]
Length = 752
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 15/232 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
++ L P + L+D +F + I +G T
Sbjct: 275 LSSAALACILLLIKSPLY--LYDSSFLLSFGAILGLGLVQPALFSKKMQRGKKTLG---- 328
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
IK F++ I+ I + ++ F+ I V+G+I N+L +P ++I + +
Sbjct: 329 EKIKNLFMDGIKGGIAVWAVL--LPMMMYFFYEISVFGIIINLLVLPTAGILLISGCVGS 386
Query: 134 ILLM--ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+L M I+ L + L+ I + I I P L ++
Sbjct: 387 LLGMCGIIPLGKLVTAPALLILEAYISVGKTIQNIPFAVWITGKPALWKCVCYYVVLFLL 446
Query: 192 FC---KTNIR--HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
+ R G ++ I ++ + S L +G+ + + N
Sbjct: 447 LWIKKQKRWRKFFYGILVFCILLLYGKLPWETRSLTFLDVGQGDCICIHTDN 498
>gi|78485301|ref|YP_391226.1| DNA internalization-related competence protein ComEC/Rec2
[Thiomicrospira crunogena XCL-2]
gi|78363587|gb|ABB41552.1| DNA internalization-related competence protein ComEC/Rec2
[Thiomicrospira crunogena XCL-2]
Length = 841
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 76/231 (32%), Gaps = 35/231 (15%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L I +K+ P+ A + L P G F + ++ I PK+
Sbjct: 344 LFIRRKFQPWSALALAAFLIVLFDPRSVLSHG-----FWLSFMAVALIFAVLREPKI--- 395
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
W+K+ I + L+ ++H I + ++N++A+P
Sbjct: 396 ---KMAPNWQKMI------------AIQLALTIGLVPLLVSYYHQIALASFLSNLIAVPF 440
Query: 122 LSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET- 178
+S + +P I +LL + SL ++ + + + + + + IG +
Sbjct: 441 VSLIALPLLFITVLLSFVSTSLASVIMSLNNFLWQSLWWGLETLESQFDYWVIGHVNGWQ 500
Query: 179 SFVTIVVEFLLMVFCKT---------NIRHIGSIMIGITIIILFTFPYSFS 220
+ + ++F + + + + + + P
Sbjct: 501 VVLLYGIPLAGVIFWRKKQQGIELQARFKLLLLSGVIFGLWAVMAVPTLTH 551
>gi|332992968|gb|AEF03023.1| DNA internalization-related competence protein ComEC/Rec2
[Alteromonas sp. SN2]
Length = 851
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/236 (11%), Positives = 70/236 (29%), Gaps = 29/236 (12%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
PF + + P +F + +I W
Sbjct: 369 PFHMGVFMLFTCIVLFPLSLL-----QASFYLSIGAVISI------------------WL 405
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + I S + + F G+IAN+ +P+++ +V+P
Sbjct: 406 LNWRFRFQAMPWYKALFCIQLGVSVVMAPITLLWFGTASTIGIIANLFVLPVIT-LVLPV 464
Query: 130 GLIAILL---MILSLDNIPFGVM--AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
L+A++ + SLD + ++ L ++ + S + ++
Sbjct: 465 ALLAVMAGYYIPTSLDFAIWVLLKIDKVLGWLLTCLSDAASWPISAIHFYPTTGSILCLL 524
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
LL + + + ++ + + + F + + + G A+
Sbjct: 525 FAMLLAILPRWRYKWACVSLLILPVTLTFIHSSPTRWFVNVFDAGQGTAIALTKGE 580
>gi|127512566|ref|YP_001093763.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella loihica PV-4]
gi|126637861|gb|ABO23504.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella loihica PV-4]
Length = 761
Score = 75.2 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/258 (13%), Positives = 75/258 (29%), Gaps = 27/258 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I + PF I L P GL + ++ I +F
Sbjct: 295 IRRYASPFERLLWALFIVLLLDPLSILGAGL-----WLSFGALAIILWFTQSWPAPDERL 349
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S ++ + Q + G Y LI N++ +P S
Sbjct: 350 SSWQRLKWRLKQMWQIQWRLSLSLGLLQGLLFGGF---------APYALIFNLIFVPWFS 400
Query: 124 FVVIPAGLIAILLMILSLD-----NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
VVIP +A++ I+ + ++P ++ + + + + +
Sbjct: 401 LVVIPLSFMALITWIIGIYLGVSVSLPLYLLDLAISPMTLAFDWLGELPLHWLPASMQLV 460
Query: 179 SFVTIVVEFLLMVFCK---TNIRHIGSIMIGITIIILFTFPYSFSPDL---LISEKGNLV 232
S +V L ++ + R + ++ + + L+ L
Sbjct: 461 S--ALVFGLLGLILWRLASGAWRWMIPVLFMPLCLWFLPQRLTDPKSWQVHLLDVGQGLS 518
Query: 233 ALVDKNTLISNYSNPPSF 250
+V+K Y +F
Sbjct: 519 LVVEKQGRALIYDTGAAF 536
>gi|261222312|ref|ZP_05936593.1| DNA uptake protein [Brucella ceti B1/94]
gi|265998275|ref|ZP_06110832.1| DNA uptake protein [Brucella ceti M490/95/1]
gi|260920896|gb|EEX87549.1| DNA uptake protein [Brucella ceti B1/94]
gi|262552743|gb|EEZ08733.1| DNA uptake protein [Brucella ceti M490/95/1]
Length = 616
Score = 75.2 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 3/151 (1%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 398 LFVDRAAISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 456
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 457 RAGRKA--AERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 514
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+S +V+P G+ ++LM L LD +P VM G
Sbjct: 515 ISILVMPFGVFGLVLMPLQLDWLPLQVMGVG 545
Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I+ I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
>gi|264677308|ref|YP_003277214.1| DNA internalization-related competence protein [Comamonas
testosteroni CNB-2]
gi|262207820|gb|ACY31918.1| DNA internalization-related competence protein [Comamonas
testosteroni CNB-2]
Length = 806
Score = 74.8 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 80/231 (34%), Gaps = 23/231 (9%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ + ++ P L+ F + + + S ++ +
Sbjct: 343 RWPWACVWLLALAVIVVADPWA-----LWQAGFWLSFVAVGVLLASNSGVVSAEAASAKK 397
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ + ++ +L + F + + GL+AN+LAIP ++ VV
Sbjct: 398 RFLARLKELWREQWLISLALAPLGLLL----------FGQVSIVGLLANLLAIPWVTLVV 447
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS--FVTIV 184
P L+A +L + + + ++ + ++ P + I
Sbjct: 448 TPLALLAAVLPMAASAAAVAML------PLMSLLQWLAALPGAVWALPQPAWWASVLAIA 501
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
L++ +R + +I + + ++P + +LL ++ G A++
Sbjct: 502 AGLLVIAPLPLRLRLVAAIFVLPALFWPRSWPRAGEFELLAADIGQGNAVI 552
>gi|226330702|ref|ZP_03806220.1| hypothetical protein PROPEN_04622 [Proteus penneri ATCC 35198]
gi|225201497|gb|EEG83851.1| hypothetical protein PROPEN_04622 [Proteus penneri ATCC 35198]
Length = 536
Score = 74.8 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 72/222 (32%), Gaps = 20/222 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + P+ + + P +F + + AI ++Y + +
Sbjct: 82 SRLFLPWQWALWSAALILIVEPLSILS-----ASFWLSFSAVFAIIFWYWMSPLKAKYNH 136
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W ++ ++ L F F + I N+ A+PI+SF
Sbjct: 137 QKRWFILRLIHLQFGLL------------IILLPFQFYLFGGANFFSFIVNLWAVPIISF 184
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ +P + +L S W +D+ I+ A + + +
Sbjct: 185 ITVPLIMFGLLTSFSSFLQPIIW--HW-VDLSINFAFWCAPLFLPYWQYSGTVPFLLGFS 241
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
++++ + RH ++I + I++ F +S
Sbjct: 242 GVGIIVMIKMSWWRHHFILLIAVGILLYCEFTTFSRYQWRMS 283
>gi|299530851|ref|ZP_07044266.1| DNA internalization-related competence protein [Comamonas
testosteroni S44]
gi|298721367|gb|EFI62309.1| DNA internalization-related competence protein [Comamonas
testosteroni S44]
Length = 829
Score = 74.8 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 81/231 (35%), Gaps = 23/231 (9%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ + ++ P L+ F + + + S ++ +
Sbjct: 366 RWPWACVWLLALAVIVVADPWA-----LWQAGFWLSFVAVGVLLASNSGAVSAEAASAKK 420
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ + ++ +L + F + V GL+AN+LAIP ++ VV
Sbjct: 421 RFLARLKELWREQWLISLALAPLGLLL----------FGQVSVVGLLANLLAIPWVTLVV 470
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS--FVTIV 184
P L+A +L + + + ++ + ++ P + IV
Sbjct: 471 TPLALLAAVLPMAASAAAVAML------PLMSLLQWLAALPGAVWALPQPAWWASVLAIV 524
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
L++ +R + +I + + ++P + +LL ++ G A++
Sbjct: 525 AGLLVIAPLPLRLRLVAAIFVLPALFWPRSWPRAGEFELLAADIGQGNAVI 575
>gi|229093395|ref|ZP_04224500.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-42]
gi|228689989|gb|EEL43792.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-42]
Length = 693
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 89/282 (31%), Gaps = 35/282 (12%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 301
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P +I ++ M + L V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIIVLICMPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 359
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIR------HIGSIMIGITIIILFTFPYSF 219
F +T + + + + +++ + I G + T ++ +
Sbjct: 360 FTRLNFGQTPILLVALYCVSIISVLMVWERRISKGMMFIFAGIFLFISTGHYVYPYFRES 419
Query: 220 SPDLLIS-EKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ +G+ + + D+ + + +W+
Sbjct: 420 GSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 461
>gi|227111955|ref|ZP_03825611.1| hypothetical protein PcarbP_03268 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 757
Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 87/257 (33%), Gaps = 27/257 (10%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+ +S P +F ++++ +++ + + ++ W W + ++
Sbjct: 318 ALILVSDPLSVLS-----DSFWLSCLAVASLIFWFQWAPLPHRLQTRRRWFWLRWIHLQT 372
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
+ + FH + L AN+ A+P++SFV P L+A+ M
Sbjct: 373 GI------------TLLLMPLQLHIFHGFSITSLPANLWAVPLVSFVTTPLILLALSTMA 420
Query: 139 L-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TN 196
L L + + + L ++ + + + + + V + +V + +
Sbjct: 421 LAPLSEMLWWLADISLRVVFAPLTYL-----QTGWVYLDASLLLVSVAGWGAVVIWRFSW 475
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLISNYSNPPSFIFS 253
R + + +++L + PD + L ++++ Y +
Sbjct: 476 WRVYPMSVSALIVVLLVFRIKTDEPDWRVDMLDVGHGLAIVIEQRGKAVLYDTGNRWEGG 535
Query: 254 QWKSALITPFHEAPHVQ 270
+ I P+ V
Sbjct: 536 DMATREILPYLRWRGVD 552
>gi|171321906|ref|ZP_02910799.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria MEX-5]
gi|171092803|gb|EDT38073.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria MEX-5]
Length = 829
Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 68/248 (27%), Gaps = 19/248 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ G L+ P G F + ++ I + + + +
Sbjct: 344 RSVPTSAVLCAALGGVLLADPWAVLSAG-----FWLSFGAVAVILMAVAGWRAVREFDGG 398
Query: 66 N-----------TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
+ W + + + + + F I V G +
Sbjct: 399 DDSAPDGAAAFDRWRRLRTWCARAGRRIAEATRVQYAVTLGLAPLTAAWFAQISVSGPLG 458
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
N AIP +S VV P L I L LD F + L+ ++ + ++ R
Sbjct: 459 NAFAIPWVSSVVTPIVLAGIGL-PAPLDAYAFRLAHAALEPMMALLRHLADWPAGVFWLR 517
Query: 175 IPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + + + R + + P L + + G
Sbjct: 518 MPGWPVLVLACVGVGWALMPRGWPLRWAAPLTWLPLVAPAPDAPPPGGFRLTVLDVGQGA 577
Query: 233 ALVDKNTL 240
+++ +
Sbjct: 578 SVLVETAR 585
>gi|169832210|ref|YP_001718192.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Desulforudis audaxviator MP104C]
gi|169639054|gb|ACA60560.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Desulforudis audaxviator MP104C]
Length = 818
Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 61/223 (27%), Gaps = 21/223 (9%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT-WTW 70
A + L P PG F +F++ + G Y P ++ + W
Sbjct: 322 TALALAAMVILLGNPLSLYDPG-FQLSFTATW------GILYLGPVIVRGLDKLAAGWRL 374
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
S F + + +++ I L+AN++ +P++ + +
Sbjct: 375 SWWSPAAGWF-----LAVPLAAQLGTLPLIAYYYNLISPVSLLANVVTVPLVGLIFVLGF 429
Query: 131 LIAILLMILSLDNIPF-GVMAWGLDIIIHIAHRISVAHNEFCIGRIP------ETSFVTI 183
+ A+L L +D+ + + + + P
Sbjct: 430 ITALLGAFLPAAAWLTGPATGVLIDLFLALVKFFAGLKGAYYYVPTPSLLLVGSWYLACW 489
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ F R G+ + L+ +
Sbjct: 490 GLGF-FAGPTPWRERWPGAAALVGGSGRRTLGMLGVGFFLVFA 531
>gi|16800585|ref|NP_470853.1| hypothetical protein lin1517 [Listeria innocua Clip11262]
gi|16413990|emb|CAC96748.1| comEC [Listeria innocua Clip11262]
Length = 746
Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 20/217 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGI--SAIGYFYSIPKMIYSSESHN 66
P A L A S + I S I +F P +IY
Sbjct: 271 ASPPVIRAATMTALLLLSEKYATK-------WSSFSVICISFILFFIIQPHVIYEVGFQL 323
Query: 67 TWTWK-------KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
++ + ++Q I + +S+ ++ HF+ G+ N+L +
Sbjct: 324 SYVVSFGIILSSRQILVRQQSPFVKSLTISFISTMMSSVVMMYHFYSFSWVGIFFNLLYV 383
Query: 120 PILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
P+ + +V+P L LL I+S L IP ++ + + ++ + + + ++ I P
Sbjct: 384 PLFTIIVLPGCLGVFLLSIISPTLMKIPEYMLTFLIQLMESLTNLFAKIPHQTIITGRPN 443
Query: 178 TSFVTIVVEFLLMVF--CKTNIRHIGSIMIGITIIIL 212
T + +++ +L+ F + IG + +
Sbjct: 444 TIMLVLIIATILLFFYQWQKKQFPIGIFICFCLLCYF 480
>gi|258645988|ref|ZP_05733457.1| putative DNA internalization-related competence protein ComEC/Rec2
[Dialister invisus DSM 15470]
gi|260403359|gb|EEW96906.1| putative DNA internalization-related competence protein ComEC/Rec2
[Dialister invisus DSM 15470]
Length = 766
Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/252 (15%), Positives = 77/252 (30%), Gaps = 36/252 (14%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ G+ P F LFD +F + I FY +
Sbjct: 332 LGAAVAGMLL----WNPYF--LFDISFQLSVCASAGILLFYEPLRH----------ALAL 375
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA-GL 131
+ I + T ++ +FH P+Y + AN++ +P+L +V+I
Sbjct: 376 LGKIPPRICEG--CALSTAAQILVLPIILYNFHSFPLYFIPANLIVVPLLEWVIIGGLLA 433
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLM 190
+++ L + L + + IS F G + + + +
Sbjct: 434 ALSSFLLMPLAGGILQFADYFLWAALRLNGFISSLPEASFEAGSLSLAEGILYYIGVAVF 493
Query: 191 VFCKTNIR----HIGSIMIGITIIILFTFPYSF-----SPDL-------LISEKGNLVAL 234
F + R + I+ I++L + +PDL LIS +V
Sbjct: 494 CFKRKWERKGQYLLAGIIFAGAILLLAEWAARRETVLLAPDLGVDTGTVLISGDAKIVYY 553
Query: 235 VDKNTLISNYSN 246
+
Sbjct: 554 KSSGIPSAASGR 565
>gi|323702387|ref|ZP_08114052.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum nigrificans DSM 574]
gi|323532693|gb|EGB22567.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum nigrificans DSM 574]
Length = 815
Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 50/151 (33%), Gaps = 16/151 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + ++ G FY PK++ + +
Sbjct: 354 LYDIGFQLSF--VATWGLFYITPKLLDLWPGWPR-------------ALALLVAVPLAAQ 398
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWG 152
+ ++ +F+ + ++AN+L + +++ +++ G+ + L L L +
Sbjct: 399 LATLPLVVLYFNLVSPVSILANLLTVHLVALIMLFGGMSLLPGLFYLPLAHWLNVSTGLL 458
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
D+ + + + P V
Sbjct: 459 TDLFLWLVQWCNSLPGAAWYLPTPPWWVVVA 489
>gi|331084374|ref|ZP_08333478.1| DNA internalization-like competence protein ComEC/Rec2
[Lachnospiraceae bacterium 6_1_63FAA]
gi|330401638|gb|EGG81219.1| DNA internalization-like competence protein ComEC/Rec2
[Lachnospiraceae bacterium 6_1_63FAA]
Length = 752
Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 15/232 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
++ L P + L+D +F + I +G T K
Sbjct: 275 LSSAALACILLLIKSPLY--LYDSSFLLSFGAILGLGLVQPAFFSKKMQRGKKTLGEKTK 332
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
I A ++ F+ I V+G+I N+L +P ++I +
Sbjct: 333 KLFMDGIKGGIA------VWAVLLPMMMYFFYEISVFGIIINLLVLPTAGILLISGCAGS 386
Query: 134 ILLM--ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+L M I+SL + L+ I + I I P L ++
Sbjct: 387 LLGMCGIISLGKLVTAPALLILEAYISVGKTIQNIPFAVWITGKPALWKCVCYYVVLFLL 446
Query: 192 FC---KTNIR--HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
+ R G ++ I ++ + S L +G+ + + N
Sbjct: 447 LWIKKQKRWRKFFYGILVFCILLLYGKLPWETRSLTFLDVGQGDCICIHTDN 498
>gi|254824459|ref|ZP_05229460.1| comEC/Rec2 family protein [Listeria monocytogenes FSL J1-194]
gi|255520860|ref|ZP_05388097.1| integral membrane protein ComEC [Listeria monocytogenes FSL J1-175]
gi|293593696|gb|EFG01457.1| comEC/Rec2 family protein [Listeria monocytogenes FSL J1-194]
Length = 719
Score = 74.1 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 88/234 (37%), Gaps = 16/234 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P +I ++ + +Q I
Sbjct: 268 WSSFSAICLSFILFFLLQPYIIREVGFQLSYAVSFGIILSSRQILTRQQNAFTKSLAISF 327
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S ++ HF+ G+ N++ +PI + +++P L +L S + + P +
Sbjct: 328 ISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHFPEAM 387
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + ++ + + + ++ + P T + + + +++VF + +G +
Sbjct: 388 LTFFIQLVEKLTYIFAKIPHQTIVTGRPNTVILVLTIITIIIVFSQWQKKKFLLGIFICF 447
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ L +F +S + +G+ + + ++ + + F W
Sbjct: 448 CLLCYLASFNFSGKVSFIDVGQGDSILIQLPYNQGNYLIDTGGQLPFEKEAWAK 501
>gi|305666296|ref|YP_003862583.1| competence protein [Maribacter sp. HTCC2170]
gi|88708288|gb|EAR00525.1| competence protein [Maribacter sp. HTCC2170]
Length = 672
Score = 74.1 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 68/216 (31%), Gaps = 25/216 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + + F L FD F Y + AI + Y + +
Sbjct: 323 LNRPQNTFNILALSMFFILLVFNPLLV----FDVGFQMSYAAVFAIVWIYPLLQRF---W 375
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
W K + ++ + +FH P I+N++ +P L
Sbjct: 376 YPKNWLLNKGWQL---------LSVSIAAQIGVVPISLYYFHQFPGLFFISNLVIVPFLG 426
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWG---LDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ GL +++ ++ LD P ++ + ++ + +S +
Sbjct: 427 LI---LGLGIMVIALILLDFAPNSLIELYNLLIGVMNSVIAWVSQQETFILKNISFDFVQ 483
Query: 181 VTIVVEF---LLMVFCKTNIRHIGSIMIGITIIILF 213
+ + L++ K R + + + I ++ +
Sbjct: 484 LLLTYALIFSLIIALTKPTFRKMAAFLTCIVLLQGW 519
>gi|313618874|gb|EFR90744.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
innocua FSL S4-378]
Length = 454
Score = 74.1 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P +IY ++ + ++Q I
Sbjct: 3 WSSFSVICISFILFFIIQPHVIYEVGFQLSYVVSFGIILSSRQILVRQQSPFVKSLTISF 62
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGV 148
+ +S+ ++ HF+ G+ N+L +P+ + +V+P L LL I+S L IP +
Sbjct: 63 ISTMMSSVVMMYHFYSFSWVGIFFNLLYVPLFTIIVLPGCLGVFLLSIISPTLMKIPEYM 122
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + ++ + + + ++ I P T + +++ +L+ F + IG +
Sbjct: 123 LTFLIQLMESLTNLFAKIPHQTIITGRPNTIMLVLIIATILLFFYQWQKKQFPIGIFICF 182
Query: 207 ITIIIL 212
+
Sbjct: 183 CLLCYF 188
>gi|220929374|ref|YP_002506283.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium cellulolyticum H10]
gi|219999702|gb|ACL76303.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium cellulolyticum H10]
Length = 786
Score = 74.1 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 19/187 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ++ D + + + I P LFD F + ++ FY K S
Sbjct: 316 IMREPDIYTSISAAALILLAINPYT-----LFDIGFQLSFGATLSLVMFYQQIKTFIDS- 369
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
I + + A + + +F+ + +++NIL +P++
Sbjct: 370 ----------KYIPGVISDTLAATL--AAQLGVVPVTLYYFNNFSTFSILSNILVVPLVE 417
Query: 124 FVVIPA-GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
V I ++ L+ ++L I + L I+ + S P V
Sbjct: 418 VVTIIGFIMVFAGLLNINLAVIIGYINNTFLSFILFVTEVTSKIPFSLLKLPTPTFGMVL 477
Query: 183 IVVEFLL 189
L+
Sbjct: 478 FYYLLLI 484
>gi|71908445|ref|YP_286032.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Dechloromonas aromatica RCB]
gi|71848066|gb|AAZ47562.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Dechloromonas aromatica RCB]
Length = 772
Score = 74.1 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 92/317 (29%), Gaps = 36/317 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ P + L P G F + + A+ Y +
Sbjct: 330 RIVAPSRTLALALLVVLLVDPWAVLAAG-----FWLSFGAVGALLYV---------GSAQ 375
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + + ++ L+ F + +AN LAIP++SFV
Sbjct: 376 VGEGQGWRAHVRSWGIAQW------VATLASLPILLLVFQQFSLVSPLANALAIPVISFV 429
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
V P L+ ++ + + VMAW +D + A + + P V+
Sbjct: 430 VTPLALLGAVVPWWPIFGLAHQVMAWLMDFLEWCATW-----PVWQVPAPPLWLAVSAGA 484
Query: 186 EFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA----------L 234
+ + R +G+ ++ + P + + + G +A +
Sbjct: 485 GVAFCLLPRGLPGRWLGAFLVVPVLFWATEKPADGEVWISVLDVGQGLASVLRTREHTLI 544
Query: 235 VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
D L S S+ + + L + V D ++ ++ +
Sbjct: 545 YDPGPLYSAESDAGQRVVVPYLRFLGIDKVDMLMVTHRDTDHSGGTASVRAALAVGEVRS 604
Query: 295 LCIKKSFCVGCHRSDVI 311
+
Sbjct: 605 SVAGLDGQRCVAGQRWV 621
>gi|325954423|ref|YP_004238083.1| ComEC/Rec2-related protein [Weeksella virosa DSM 16922]
gi|323437041|gb|ADX67505.1| ComEC/Rec2-related protein [Weeksella virosa DSM 16922]
Length = 667
Score = 74.1 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 77/227 (33%), Gaps = 31/227 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ +K F + + P+ LFD F + + I +
Sbjct: 306 LKRKPYIFHTLALSAFVILIVRPN-----DLFDIGFRLSFSAVFFIVWL----------N 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
++ S I QSF + T F +F+ L NI+ IP +
Sbjct: 351 DITMKWVRRGSFISQSFKGLLTT--STAAQLGTMPFASLYFNQFSWLFLFGNIVLIP-AA 407
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMA---WGLDIIIHIAHRISVAH-NEFCIGRIPETS 179
++++ GL++ILL + +D +P ++ + ++ I ++ + I +
Sbjct: 408 YLMMILGLLSILL--VGIDFVPTFIVEVNNFFINTINTYIGWLATWDKLVWRNLYISPFT 465
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
++V + + R + I +I+L L+
Sbjct: 466 SFLLIVALVCL-------RFVFVQQSKIALIVLLIALTGNLSHRLVD 505
>gi|313623712|gb|EFR93859.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
innocua FSL J1-023]
Length = 684
Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 77/194 (39%), Gaps = 18/194 (9%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGI--SAIGYFYSIPKMIYSSESHNTWT 69
P A LS A S + I S I +F P +IY ++
Sbjct: 212 PVIRAATMTALLSLSEKYATK-------WSSFSVICISFILFFIIQPHVIYEVGFQLSYV 264
Query: 70 WK-------KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++Q I + +S+ ++ HF+ G+ N+L +P+
Sbjct: 265 VSFGIILSSRQILVRQQSPFVKSLTISFISTMMSSVVMMYHFYSFSWVGIFFNLLYVPLF 324
Query: 123 SFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ +V+P L LL I+S L IP ++ + + ++ + + + ++ I P T
Sbjct: 325 TIIVLPGCLGIFLLSIISPTLMKIPEYMLTFLIQLMESLTNLFAKIPHQTIITGRPNTIM 384
Query: 181 VTIVVEFLLMVFCK 194
+ +++ +L+ F +
Sbjct: 385 LVLIIATILLFFYQ 398
>gi|222055709|ref|YP_002538071.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter sp. FRC-32]
gi|221564998|gb|ACM20970.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter sp. FRC-32]
Length = 803
Score = 73.7 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/182 (12%), Positives = 60/182 (32%), Gaps = 24/182 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ ++ +P + + P LFD +F + + I I + ++
Sbjct: 328 LAVEREVEPVNSLLLAAMVILAVTPGA-----LFDISFQLSFVALWGIIILTPIFMLPFA 382
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ T ++K + + + +FH + GLI+N++ +P+
Sbjct: 383 RFASGTISYKLLLFL----------MASLAAITGTLFPVAFYFHRVSFTGLISNLIVVPL 432
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ + + ++ + + M ++ A N F + +
Sbjct: 433 MGYGAV---VLGFMALPFIFLFPFVARM------LLVAAAFPVKIANSFVLLVSNIPALP 483
Query: 182 TI 183
+
Sbjct: 484 LL 485
>gi|227356794|ref|ZP_03841179.1| possible competence protein EC [Proteus mirabilis ATCC 29906]
gi|227163084|gb|EEI48019.1| possible competence protein EC [Proteus mirabilis ATCC 29906]
Length = 789
Score = 73.7 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 70/247 (28%), Gaps = 25/247 (10%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P+ + L P +F + + AI +Y + +
Sbjct: 338 FLPWQWAIWSAAVILLLDPLAILS-----ASFWLSFSAVFAIIVWYWLYPLNKRFSQQKR 392
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W ++ + F F ++ L+ N+ A+PI+SF+ +
Sbjct: 393 WFVIRLIH------------LQLGLLIILLPFQYYLFGGGNLFSLLVNLWAVPIISFITV 440
Query: 128 PAGLIAILLMILSLDNIPFGV-MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P + + L + + ++ A + +
Sbjct: 441 PLIMCGLFTAFLPVLQPIIWSWVDQSINWAFFCAPYF----LAYWQPCGAVPWLFALSGI 496
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLISN 243
L+V + RH I+I I + +S D I L +++K
Sbjct: 497 MTLLVIKMSWWRHHVIILITIATFLYCELSFSKRYDWRITMLDVGHGLAIIIEKEGEAVI 556
Query: 244 YSNPPSF 250
Y +
Sbjct: 557 YDTGIRW 563
>gi|73540781|ref|YP_295301.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Ralstonia eutropha JMP134]
gi|72118194|gb|AAZ60457.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Ralstonia eutropha JMP134]
Length = 800
Score = 73.7 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 76/249 (30%), Gaps = 23/249 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ +A L P PG F + + I S P +
Sbjct: 333 RTPPASMVLAWAAFVALLLDPWAVTQPG-----FWLSFGAVGVIFLAASRPHVPVRG--- 384
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
I+ + L+ R + + F PV IAN +AIP++S
Sbjct: 385 ------WWPRIRAALLSAARTQWAV--TVGLVPLTLLLFRQFPVISPIANAVAIPVVSMF 436
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
V P L+ ++ ++L + L ++ + ++ + + +
Sbjct: 437 VTPLALLGAVV-PMTLAAPLLVLAHGALAWLVLVLQWLASSEWAVWETAQAGVLETVLAL 495
Query: 186 EFLLMVFCK----TNIRHIGSIMIGITIIILF--TFPYSFSPDLLISEKGNLVALVDKNT 239
L++ IR G ++I ++ F +L +G V + +
Sbjct: 496 AGTLILLAPAVFGLRIRLHGVLLILPMVVARGDDVAHGEFRAAMLDVGQGTAVLVQTRAH 555
Query: 240 LISNYSNPP 248
+ + P
Sbjct: 556 ALLYDAGPA 564
>gi|148360720|ref|YP_001251927.1| DNA uptake/competence protein ComA [Legionella pneumophila str.
Corby]
gi|296106214|ref|YP_003617914.1| DNA uptake/competence protein ComA [Legionella pneumophila 2300/99
Alcoy]
gi|148282493|gb|ABQ56581.1| DNA uptake/competence protein ComA [Legionella pneumophila str.
Corby]
gi|295648115|gb|ADG23962.1| DNA uptake/competence protein ComA [Legionella pneumophila 2300/99
Alcoy]
Length = 735
Score = 73.7 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 81/250 (32%), Gaps = 30/250 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+++ P+ + P G F + ++ + +
Sbjct: 300 KQRFTPWQIWRYALFLVLCIEPHAVFLQG-----FYFSFLAVACLLL------------T 342
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
H W K + + + + G +AN+ +IP++SF
Sbjct: 343 HQRWPLKNYKK---------TLTLQLSCLIGLMPLTLHWYSYGSINGFLANLFSIPLVSF 393
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+++P L+ ++ L I +AW + +++ + I + + +
Sbjct: 394 LIVPLALMTMITSPLHWSWILMKPLAWLVALLLQGLTYVEQIAGINITWSITSVTMMLAM 453
Query: 185 VEFLLM--VFCKTNIRHIGSIMIGITIII--LFTFPYSFSPDLLISEKGNLVALVDKNTL 240
L + + +H+ + I + + +P ++L +G VA+ ++ +
Sbjct: 454 TAGLFLRVLLPVKPFKHLAILWIILPLFPPRTAIYPGEALINILDVGQGLAVAIQTQHHV 513
Query: 241 ISNYSNPPSF 250
+ + F
Sbjct: 514 LLYDTGDSYF 523
>gi|50121482|ref|YP_050649.1| hypothetical protein ECA2558 [Pectobacterium atrosepticum SCRI1043]
gi|49612008|emb|CAG75457.1| putative competence-related protein [Pectobacterium atrosepticum
SCRI1043]
Length = 757
Score = 73.7 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/261 (13%), Positives = 84/261 (32%), Gaps = 35/261 (13%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+ +S P +F ++++ +++ + + ++ W W + ++
Sbjct: 318 ALILVSDPLSVLS-----DSFWLSCLAVASLIFWFQWAPLPHKLQTQRRWFWLRWIHLQT 372
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
+ + FH + L AN+ A+P++SFV P L+A+ +
Sbjct: 373 GI------------TLLLMPLQLHIFHGFSIISLPANLWAVPLVSFVTTPLILLALTTIG 420
Query: 139 L-SLDNIPFGVMAWGLDIIIHIAHRISV----AHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L I + + L ++ + +G I V I
Sbjct: 421 FAPLSEILWWLADISLRVVFAPLSYLQTGWIYLDASLLLGSIAGWGAVVI---------W 471
Query: 194 K-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLISNYSNPPS 249
+ + R + + + +++L S +PD + L ++++ Y
Sbjct: 472 RFSWWRIYPASIGALILVLLVFRTKSDAPDWRVDMLDVGHGLAIVIEQRGKAVLYDTGNR 531
Query: 250 FIFSQWKSALITPFHEAPHVQ 270
+ I P+ V
Sbjct: 532 WEGGDMAMREILPYLRWRGVD 552
>gi|315658137|ref|ZP_07911009.1| competence protein ComEC [Staphylococcus lugdunensis M23590]
gi|315496466|gb|EFU84789.1| competence protein ComEC [Staphylococcus lugdunensis M23590]
Length = 466
Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 2/118 (1%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
I L P + GL F I + Y I S + SI
Sbjct: 1 MIIILFKPKRTSLSGLNILAFVFLLLLIVQPDFLYDIGFQFSFLISLFLILAQP--SIHH 58
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ I A + I HF+ + G++ N++ +P+ SF+ P L L+
Sbjct: 59 LSRLKAFFVITYIAQLGALLIQIYHFNQVQWIGILTNLIFVPLYSFIYFPLTLFFFLI 116
>gi|307565363|ref|ZP_07627856.1| ComEC/Rec2-like protein [Prevotella amnii CRIS 21A-A]
gi|307346032|gb|EFN91376.1| ComEC/Rec2-like protein [Prevotella amnii CRIS 21A-A]
Length = 523
Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 60/192 (31%), Gaps = 18/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ +K + + L P LFD +F + I +I +Y
Sbjct: 335 LGRKKVSINILSVVAFCILLYDPFV-----LFDVSFQLSFAAIVSILLYYP--------- 380
Query: 64 SHNTWTWKKISSIKQSFLNEIRAN--IGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
K K I I + + ++ +P Y +++ +AIP
Sbjct: 381 -QINKLLNKGFLCKYKIFTRIFQMFTITLSAQIGTAPLIAFYYSKLPTYFFLSSFIAIPC 439
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSF 180
+ ++ + + + L + V+ + + H +S +G I
Sbjct: 440 TTIILYAGVFFFVFIWLTPLQWLLGQVLYLTTTFLNNSLHWLSSLPMASIFVGNITAYQV 499
Query: 181 VTIVVEFLLMVF 192
V + ++++
Sbjct: 500 VLVYFMLIILLL 511
>gi|332829253|gb|EGK01907.1| hypothetical protein HMPREF9455_00029 [Dysgonomonas gadei ATCC
BAA-286]
Length = 534
Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 67/224 (29%), Gaps = 29/224 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+K A L P LFD F + + +I Y + E
Sbjct: 325 RKSFSLHALYIAGFFILLVSPF-----SLFDIGFQLSFTSVLSILYLLPKVSALLKVE-- 377
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
K + +I Q F + + + +F P Y AN+L +P+++ +
Sbjct: 378 ----NKYLRNIWQMF------TLSIVAQLATFPLCLYYFGTFPTYFFAANLLIVPLVTLI 427
Query: 126 VIPAGLIAI-----LLMI---LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ G I + ++M +P + + + ++ I G
Sbjct: 428 IYTVGGIGLAKMLSMIMPDLTACFYYLPVKTLQFLVWLMTSIIRFFEGLPLALIDGIEIS 487
Query: 178 TS----FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ T++ L+ + K I + + +
Sbjct: 488 FTDMILIYTLITGLLIFLIYKKPKGLILGLFAVFLFFGVHIYHN 531
>gi|282899246|ref|ZP_06307219.1| ComEC/Rec2-related protein [Cylindrospermopsis raciborskii CS-505]
gi|281195882|gb|EFA70806.1| ComEC/Rec2-related protein [Cylindrospermopsis raciborskii CS-505]
Length = 779
Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 75/257 (29%), Gaps = 24/257 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + T +++ + F I ++ +
Sbjct: 367 IWDLGFQLSFLATLGLMV-------------TATPITQRLDWLPPLFATLI--SVPLAAT 411
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
L+ F + +Y + NI+A P++S + + + ++ + LS L + +
Sbjct: 412 IWTLPLLLHIFSTVAIYSVPLNIIATPLISILSMGGMISGLVSLPLSDLGGYVASFLYYP 471
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVF---CKTNIRHIGSIMIGIT 208
I+I +A G I + I + + G I +
Sbjct: 472 AHILIKMAEFFDNLPGNSLNTGSISIWQMLIIYGLIVATCLVPWWQKRWWLAGLIATILA 531
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN----YSNPPSFIFSQWKSALITPFH 264
++ ++ + + L++ V ++ ++ F +
Sbjct: 532 VVPIWYYTSNLLKITLLATNSEPVLVIQDRGQVTLINSGDPGTGRFTILPFLRQQGINHI 591
Query: 265 EAPHVQKEDLQEKNQSS 281
+ N S
Sbjct: 592 DWAISTNFSGDANNSWS 608
>gi|271500781|ref|YP_003333806.1| DNA internalization-like competence protein ComEC/Rec2 [Dickeya
dadantii Ech586]
gi|270344336|gb|ACZ77101.1| DNA internalization-related competence protein ComEC/Rec2 [Dickeya
dadantii Ech586]
Length = 785
Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 88/266 (33%), Gaps = 40/266 (15%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+ +S P +F ++A+ ++Y + + W W + +
Sbjct: 347 AVILVSDPLSVLS-----DSFWLSALAVAALIFWYQWAPLSPHM--QHAWRWVWLRGLHM 399
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
+ + FH + + L AN+ A+P++SFV P L+A+ LM
Sbjct: 400 QAGVTLLLM----------PLQVLIFHGVSLSSLPANLWAVPLVSFVTTPLILLALPLMG 449
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT-------IVVEFLLMV 191
+ L +A GL + + + + +P V +L ++
Sbjct: 450 IPL-------VAQGLWWLADRSLALVFLP----LQAMPPGWLPLGEHLVPYSVAGWLAVI 498
Query: 192 FCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLISNYSNP 247
+ R ++ + ++ + P +P I L ++++ Y
Sbjct: 499 VWRFGWWRTYPFSLLAL-VLFMVLRPKPPAPLWRIDMLDVGHGLAVVIEQQGKAWLYDTG 557
Query: 248 PSFIFSQWKSALITPFHEAPHVQKED 273
P + I P+ + +Q E
Sbjct: 558 PGWEGGNSAEREILPYLKWRGLQLEG 583
>gi|282859477|ref|ZP_06268582.1| ComEC/Rec2-like protein [Prevotella bivia JCVIHMP010]
gi|282587705|gb|EFB92905.1| ComEC/Rec2-like protein [Prevotella bivia JCVIHMP010]
Length = 523
Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/166 (12%), Positives = 54/166 (32%), Gaps = 13/166 (7%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + L P LFD +F + +++I FY I+++
Sbjct: 335 LGRDKMSLNTLAVAAFCILLYDPLT-----LFDVSFQLSFSAVASILLFYP----IFNAW 385
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + K + F + + + + +F Y L+++ +AIP +
Sbjct: 386 FCSDFFIKHKWLLW--FPQMVAMTLS--AQIGTAPLVAFYFSKFSTYFLLSSFVAIPCTT 441
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ + L + V+++ + H ++
Sbjct: 442 IILYAGVTFFAFVWFAPLQWLAIEVLSFTTIFLNTSLHWLATLPKA 487
>gi|56478742|ref|YP_160331.1| DNA internalization-related competence protein ComEC/Rec2
[Aromatoleum aromaticum EbN1]
gi|56314785|emb|CAI09430.1| DNA internalization-related competence protein ComEC/Rec2
[Aromatoleum aromaticum EbN1]
Length = 782
Score = 73.3 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 67/231 (29%), Gaps = 30/231 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ + P G F + ++AI Y
Sbjct: 336 RESAGSRVIALALFTVLVVDPWAVLSAG-----FWLSFGAVAAIMYVVGGRAGSMPGW-- 388
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + L+ F+ + AN AIP++SF+
Sbjct: 389 -----------------RVAVTTQLAITLATVPALLVLFNAFSLLSPFANAFAIPLVSFL 431
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI-V 184
+ P L AI+L L + + +++ ++ P +
Sbjct: 432 ITPLALAAIVLPFPPLLELAHWLTG----LMMVALQWLADMPFAMWQQAGPPPLIALAGI 487
Query: 185 VEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL 234
L ++ + RH+G + + + P L + + GN +A+
Sbjct: 488 AGVLWLLLPRGTPARHVGVLAMLPMLAWSPPRPAPGEFRLTVLDVGNGMAV 538
>gi|172061066|ref|YP_001808718.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria MC40-6]
gi|171993583|gb|ACB64502.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria MC40-6]
Length = 833
Score = 72.9 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 69/248 (27%), Gaps = 19/248 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ G ++ P G F + ++ I + + + +
Sbjct: 348 RSVPTSAVLCAALGGVLIADPWAVLSAG-----FWLSFGAVAVILMAVAGWRAVREFDGG 402
Query: 66 N-----------TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
+ W + + + + + F I V G +
Sbjct: 403 DDSAPDGAAAADRWRRPRAWCTRAGRRIAEATRVQYAVTLGLAPLTAAWFAQISVSGPLG 462
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
N AIP +S VV P L I L LD F + L+ ++ + ++ R
Sbjct: 463 NAFAIPWVSSVVTPIVLAGIGL-PAPLDAYAFRLAHAALEPMMALLRHLADWPAGVFWLR 521
Query: 175 IPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P+ + + + R + + P L + + G
Sbjct: 522 MPDWPVLVLACVGVGWALMPRGWPLRWAAPLTWLPLVAPAPDAPPPGGFRLTVLDVGQGA 581
Query: 233 ALVDKNTL 240
+++ +
Sbjct: 582 SVLIETAR 589
>gi|115352199|ref|YP_774038.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria AMMD]
gi|115282187|gb|ABI87704.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria AMMD]
Length = 829
Score = 72.9 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/248 (12%), Positives = 69/248 (27%), Gaps = 19/248 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ G L+ P G F + ++ I + + + +
Sbjct: 344 RSVPTSAVLCAALGGVLLADPWAVLSAG-----FWLSFGAVAVILMAVAGWRAVREFDGG 398
Query: 66 NTWTWKKISSI-----------KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
+ +++ + + + + F I V G +
Sbjct: 399 DDSAPDGAAAVDRRRRLRAGCTRAGRRIAEATRVQYAVTLGLAPLTAAWFAQISVSGPLG 458
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
N AIP +S VV P L I L LD F + L+ ++ + ++
Sbjct: 459 NAFAIPWVSSVVTPIVLAGIGL-PAPLDAYAFRLAHAALEPMMALLRHLADWPAGVFWLP 517
Query: 175 IPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P+ + + + R + + P L + + G
Sbjct: 518 MPDWPVLVLACVGVGWALMPRGWPLRWAAPLTWLPLVAPAPDAPPPGGFRLTVLDVGQGA 577
Query: 233 ALVDKNTL 240
+++ +
Sbjct: 578 SVLVETAR 585
>gi|319779407|ref|YP_004130320.1| hydrolase of the metallo-beta-lactamase superfamily [Taylorella
equigenitalis MCE9]
gi|317109431|gb|ADU92177.1| hydrolase of the metallo-beta-lactamase superfamily [Taylorella
equigenitalis MCE9]
Length = 813
Score = 72.9 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 77/223 (34%), Gaps = 17/223 (7%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ + + P + F + ++ + Y + K + + K +
Sbjct: 345 VAVVILIFDPWA-----IHSVGFYLSFAAVAVLQYILNFYKELQYGD------MSKWKKL 393
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
K + + + + + FLI F+ I + N AI ++ ++ PA L+ +
Sbjct: 394 KSAIFEW--TKLQLGITFAITPFLIIFFNQISIVSPFVNAYAIFLIGSIITPACLLLAMF 451
Query: 137 MIL----SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ L+ + W L ++ + I+ +++++ L +V
Sbjct: 452 TFINPYHGLNQHFADSIHWLLYKVMKLTEYINEFSWASIDIAHSPFIWLSVLGVVLFLVI 511
Query: 193 CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+ IG +MI ++ + P L+ + G ++
Sbjct: 512 KNKIFKLIGLVMILPSVFGSASLPQKGDWKLIAFDVGQGGGVL 554
>gi|317047560|ref|YP_004115208.1| DNA internalization-like competence protein ComEC/Rec2 [Pantoea sp.
At-9b]
gi|316949177|gb|ADU68652.1| DNA internalization-related competence protein ComEC/Rec2 [Pantoea
sp. At-9b]
Length = 752
Score = 72.9 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 75/218 (34%), Gaps = 22/218 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++ + +Y + S W ++ ++ +
Sbjct: 329 SFWLSALAVAVLLIWYQWFALPARFRSGRRWWVLQLLHLQLGM------------MLLMA 376
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
I F I L+AN+LA+P++SF+ +P L+A+++ + SL + + + + ++
Sbjct: 377 PLQIFLFQGISWSALVANLLAVPVVSFITVPLILLAMMMPVASLASGLWWLADQSVHRVM 436
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ ++ + + + + + ++ + + + + L +
Sbjct: 437 QV---LASLPAGWLPWSDALPAMLLLWGGGV---VWRSGMVYRAPLQCCSVAVTLLLWRV 490
Query: 218 SFSPDLL----ISEKGNLVALVDKNTLISNYSNPPSFI 251
S D I L ++ + Y P +
Sbjct: 491 SEPQDDWQIDMIDVGHGLAIVITQGDEAVLYDAGPRWT 528
>gi|134296292|ref|YP_001120027.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia vietnamiensis G4]
gi|134139449|gb|ABO55192.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia vietnamiensis G4]
Length = 836
Score = 72.9 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 82/268 (30%), Gaps = 29/268 (10%)
Query: 4 ITKKYDPFPAETTIE-GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS- 61
+ + P A G L P G F + ++AI + +
Sbjct: 342 LAGRSAPTSAVLCAALGGVLLVDPWAVLSAG-----FWLSFGAVAAILLTVAGWRATPEI 396
Query: 62 -------SESHNTWTWKKISSIKQSFLNEI----------RANIGTYGSASASIFLIKHF 104
+ + T ++++ ++ L+ + + + F
Sbjct: 397 ERADDGAGDGSSDATQQRVAQDRRRVLHAWCKRAAQRLADATRVQYAVTIGLAPLTAAWF 456
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+ V G +N AIP +S VV P L + L LD F + L ++ + ++
Sbjct: 457 AQMSVSGPFSNAFAIPWVSSVVTPLVLAGVAL-PAPLDAYAFRLAHAALGPMMTLLRHLA 515
Query: 165 VAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHIGSI--MIGITIIILFTFPYSFS 220
RIP+ + + + + + +R I + + P F
Sbjct: 516 DWPAGVFWLRIPDWPVLALACMGAAWALMPRGWPLRWAAPITWLPLVAPAPDAPPPGGFR 575
Query: 221 PDLLISEKGNLVALVDKNTLISNYSNPP 248
+L +G V + + + P
Sbjct: 576 LTVLDVGQGESVLVETARRTLLFDAGPG 603
>gi|229013546|ref|ZP_04170679.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides DSM 2048]
gi|228747706|gb|EEL97576.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides DSM 2048]
Length = 692
Score = 72.9 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 43/178 (24%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ I P +I G+ RLS + + F+ F
Sbjct: 189 LYMIIAGASPSVVRASITGVLLLVAFMCSVRLSSLDALSITAICMLIYDPYLIFNIGFQF 248
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ S ++ S I + + +++ L+
Sbjct: 249 SF--VGSFSLLLSAPILLGRSNGI----------VRNSIYISIISQL------ASTPILL 290
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
HF Y + N++ +P LS +V+P +I ++ M A G+ ++ +
Sbjct: 291 YHFGYFSPYSIFLNLIYVPFLSIIVLPCSIIILICMP------VIPFFAKGIAYVLSL 342
>gi|229062024|ref|ZP_04199349.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH603]
gi|228717176|gb|EEL68851.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH603]
Length = 692
Score = 72.9 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 43/178 (24%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ I P +I G+ RLS + + F+ F
Sbjct: 189 LYMIIAGASPSVVRASITGVLLLVAFMCSVRLSSLDALSITAICMLIYDPYLIFNIGFQF 248
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ S ++ S I + + +++ L+
Sbjct: 249 SF--VGSFSLLLSAPILLGRSNGI----------VRNSIYISIISQL------ASTPILL 290
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
HF Y + N++ +P LS +V+P +I ++ M A G+ ++ +
Sbjct: 291 YHFGYFSPYSIFLNLIYVPFLSIIVLPCSIIILICMP------VIPFFAKGIAYVLSL 342
>gi|229135151|ref|ZP_04263951.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST196]
gi|228648279|gb|EEL04314.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST196]
Length = 692
Score = 72.9 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 43/178 (24%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ I P +I G+ RLS + + F+ F
Sbjct: 189 LYMIIAGASPSVVRASITGVLLLVAFICSVRLSSLDALSITAICMLIYDPYLIFNIGFQF 248
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ S ++ S I + + +++ L+
Sbjct: 249 SF--VGSFSLLLSAPILLGRSNGI----------VRNSIYISIISQL------ASTPILL 290
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
HF Y + N++ +P LS +V+P +I ++ M A G+ ++ +
Sbjct: 291 YHFGYFSPYSIFLNLIYVPFLSIIVLPCSIIILICMP------VIPFFAKGIAYVLSL 342
>gi|229169073|ref|ZP_04296788.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH621]
gi|228614301|gb|EEK71411.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH621]
Length = 692
Score = 72.9 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 43/178 (24%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ I P +I G+ RLS + + F+ F
Sbjct: 189 LYMIIAGASPSVVRASITGVLLLVAFICSVRLSSLDALSITAICMLIYDPYLIFNIGFQF 248
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ S ++ S I + + +++ L+
Sbjct: 249 SF--VGSFSLLLSAPILLGRSNGI----------VRNSIYISIISQL------ASTPILL 290
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
HF Y + N++ +P LS +V+P +I ++ M A G+ ++ +
Sbjct: 291 YHFGYFSPYSIFLNLIYVPFLSIIVLPCSIIILICMP------VIPFFAKGIAYVLSL 342
>gi|209519979|ref|ZP_03268758.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. H160]
gi|209499576|gb|EDZ99652.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. H160]
Length = 873
Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 70/231 (30%), Gaps = 21/231 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ G+ L P G F + + AI + S ++
Sbjct: 362 RQLARSTVLAWALGLVLLIDPWAVVSAG-----FWLSFCAVGAILFAMSGRPRGRDRQAS 416
Query: 66 N----TWTWKKISSIKQSFLNEIRAN---------IGTYGSASASIFLIKHFHCIPVYGL 112
+++++ +RA + + + + + F IP+ G
Sbjct: 417 RHDEDGAALAGWQALRRASFQRLRALAERLRSAAHVQFAVTVALAPLTVYWFAQIPLAGP 476
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFC 171
+AN AIP +S +V P L I L LD + LD ++ + +
Sbjct: 477 LANAFAIPWVSLLVTPTVLAGIAL-PAPLDAFAWRAAHTLLDGLVAGLQLLLGPRWTLWW 535
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSP 221
+ + + V L + + +R + ++ +
Sbjct: 536 LPQPHAWALAAATVGVLWCLAPRGWPLRWAAPLTWLPLLLPSADGALAQPA 586
>gi|152976755|ref|YP_001376272.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus subsp. cytotoxis NVH 391-98]
gi|152025507|gb|ABS23277.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cytotoxicus NVH 391-98]
Length = 780
Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 78/259 (30%), Gaps = 34/259 (13%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ I A P LFD F + I ++ S ++ +
Sbjct: 304 SIDAISVTAIFMLIYDPYM--LFDIGFQFSF--IGSLALLLSANTLLQHN---------- 349
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+ N I + ++ + HF Y + N++ +P LS +V+P +I
Sbjct: 350 ----RGVIQNAII--LSLISQLASIPITLYHFGYFSPYSIPLNLIYVPFLSCIVLPCSII 403
Query: 133 AILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLL 189
L M++ L +++ L + + F G+ P V ++
Sbjct: 404 IFLCMMIFPPLAKGIAHLLSICLRMSNDVLQYCEAFPFVRFTFGQTPPFLVVLYSFSIII 463
Query: 190 MVF-CKTNIR------HIGSIMIGITIIILFTFPYSFSPDLLIS-EKGNLVALV---DKN 238
+ + IR G L + + I +G+ + + DK
Sbjct: 464 ICIVWERAIRKIFLYFAFGIFFFLCMCHYLSPYFRASGSVTFIDVGQGDAILIRLPYDKE 523
Query: 239 TLISNYSNPPSFIFSQWKS 257
+ + W+
Sbjct: 524 VYLIDTGGTIPIKKEHWQQ 542
>gi|317475619|ref|ZP_07934880.1| competence protein [Bacteroides eggerthii 1_2_48FAA]
gi|316908189|gb|EFV29882.1| competence protein [Bacteroides eggerthii 1_2_48FAA]
Length = 684
Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 14/191 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI +Y S +KI + A +
Sbjct: 342 LFDVGFQLSFSAVAAILLLQPG---LYGLVSVKNTVLRKIWGL---------ATVSVAAQ 389
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F + L+ N+ IP++S +V A ++ +L L + ++ +
Sbjct: 390 VGTAPLVMFYFSRFSTHFLLTNLWVIPLVSLIVYAAVVLLVLTPFPGLQQVVADMVEGLV 449
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMV-FCKTNIRHIGSIMIGITIII 211
+ I + V LL+ I + ++
Sbjct: 450 RVQNLSLRWIEQLPWASIDHVWVDMWDVVLFYFCLLLVCRVWARRTALNVYIALSGLLLG 509
Query: 212 LFTFPYSFSPD 222
YSF D
Sbjct: 510 AAYHSYSFVAD 520
>gi|261219493|ref|ZP_05933774.1| DNA uptake protein [Brucella ceti M13/05/1]
gi|261321988|ref|ZP_05961185.1| DNA uptake protein [Brucella ceti M644/93/1]
gi|260924582|gb|EEX91150.1| DNA uptake protein [Brucella ceti M13/05/1]
gi|261294678|gb|EEX98174.1| DNA uptake protein [Brucella ceti M644/93/1]
Length = 535
Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 9/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 201 ISARDIPASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRV 260
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ I++++ I I A+ + I
Sbjct: 261 PPPQTLSAEFSEWIATLRVRVSERILEVIAGEDGNVAAALIAGARGGISEETNKDLRKAG 320
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+A+IL+I L + ++ L + +L
Sbjct: 321 LAHILSISGLHMALAAGVVMLALRSLFAL 349
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 3/141 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P P F +FS+ I+A ++ +S
Sbjct: 398 LFVDRAAISMRNLAIAAIAMIALSPHEILGPS-FQMSFSATAALIAAYAWWSERNARKFS 456
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + ++ IF HF+ GL+ N+LA+P
Sbjct: 457 RAGRKA--AERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPA 514
Query: 122 LSFVVIPAGLIAILLMILSLD 142
+S +V+P G+ ++LM L LD
Sbjct: 515 ISILVMPFGVFGLVLMPLQLD 535
>gi|218128566|ref|ZP_03457370.1| hypothetical protein BACEGG_00136 [Bacteroides eggerthii DSM 20697]
gi|217989290|gb|EEC55604.1| hypothetical protein BACEGG_00136 [Bacteroides eggerthii DSM 20697]
Length = 684
Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 14/191 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI +Y S +KI + A +
Sbjct: 342 LFDVGFQLSFSAVAAILLLQPG---LYGLVSVKNTVLRKIWGL---------ATVSVAAQ 389
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F + L+ N+ IP++S +V A ++ +L L + ++ +
Sbjct: 390 VGTAPLVMFYFSRFSTHFLLTNLWVIPLVSLIVYAAVVLLVLTPFPGLQQVVADMVEGLV 449
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMV-FCKTNIRHIGSIMIGITIII 211
+ I + V LL+ I + ++
Sbjct: 450 RVQNLSLRWIEQLPWASIDHVWVDMWDVVLFYFCLLLVCRVWARRTALNVYIALSGLLLG 509
Query: 212 LFTFPYSFSPD 222
YSF D
Sbjct: 510 AAYHSYSFVAD 520
>gi|270307472|ref|YP_003329530.1| DNA internalization competence protein [Dehalococcoides sp. VS]
gi|270153364|gb|ACZ61202.1| DNA internalization competence protein [Dehalococcoides sp. VS]
Length = 795
Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 76/254 (29%), Gaps = 29/254 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ + PA + PS L+ +F + + + Y + K + +
Sbjct: 308 LGRQKNAMPALCLAAAVMVAFSPSI-----LWSVSFQLSFMSMLGLILVYPMLKEL--NL 360
Query: 64 SHNTWTWKKISSIKQSFLNEIR-ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
++ + + + A L+ +F I + G +A +LA+P +
Sbjct: 361 RLLERFGLSEGILRTALGIVLDGLGVSLAAIAGIWPVLLYYFENISLIGPVATLLAMPAM 420
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAW-GLDIIIHIAHRISVAHNEFCIGRIPET--- 178
F+++ + L A+L ++ + G + W ++ + + G P
Sbjct: 421 PFIIVLSFLTALLGLVFPAGAVFMGYLTWLPCRYMLTVVSLTASLPGVLLAGIRPGAILM 480
Query: 179 SFVTIVVEFLLMV-----------------FCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
++ L K G + +
Sbjct: 481 GIYYFLLGVLYQAYKHFLKIPARSHANPSSAIKLRWVLAGMAVPVLVFSFSLNPSADQKM 540
Query: 222 DLLISEKGNLVALV 235
+ + G A++
Sbjct: 541 HVYFLDVGQGDAIL 554
>gi|315282385|ref|ZP_07870807.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
marthii FSL S4-120]
gi|313613967|gb|EFR87689.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
marthii FSL S4-120]
Length = 707
Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 92/265 (34%), Gaps = 23/265 (8%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGI--SAIGYFYSIPKMIYSSESHN 66
P A L A S + I S + +F P +IY
Sbjct: 232 ANPPVIRAATMTALLLLSEKYATK-------WSSFSVICLSFVLFFLLQPYVIYEVGFQL 284
Query: 67 TWTWK-------KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
++ + +Q + I + +S+ ++ HF+ G+ N+L +
Sbjct: 285 SYAVSFGIILSSRQILTRQQNIFTKSLAISFVSTMMSSVVMMYHFYSFSWVGIFFNLLYV 344
Query: 120 PILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
PI +++P + LL + S L IP V+ + + I + ++ + + P
Sbjct: 345 PIFXIIILPGCISVFLLSMCSPVLSAIPESVLTFLIQFIESFTNVLAKIPRQTIVTGRPN 404
Query: 178 TSFVTIVVEFLLMVF--CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
T + +++ +L+ F + IG + + + +F + + +G+ + +
Sbjct: 405 TIILVLIIGTILLFFYQWQKKKFPIGIFIFFCLLCYISSFNFIGKVSFVDVGQGDSILIQ 464
Query: 236 ---DKNTLISNYSNPPSFIFSQWKS 257
+K + + F W
Sbjct: 465 LPYNKGNYLIDTGGQLPFEKEDWAK 489
>gi|163942081|ref|YP_001646965.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
weihenstephanensis KBAB4]
gi|163864278|gb|ABY45337.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
weihenstephanensis KBAB4]
Length = 773
Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 43/178 (24%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ I P +I G+ RLS + + F+ F
Sbjct: 270 LYMIIAGASPSVVRASITGVLLLVAFMCSVRLSSLDALSITAICMLIYDPYLIFNIGFQF 329
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ S ++ S I + + +++ L+
Sbjct: 330 SF--VGSFSLLLSAPILLGRSNGI----------VRNSIYISIISQL------ASTPILL 371
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
HF Y + N++ +P LS +V+P +I ++ M A G+ ++ +
Sbjct: 372 YHFGYFSPYSIFLNLIYVPFLSIIVLPCSIIILICMP------VIPFFAKGIAYVLSL 423
>gi|150026364|ref|YP_001297190.1| hypothetical protein FP2334 [Flavobacterium psychrophilum JIP02/86]
gi|149772905|emb|CAL44389.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 677
Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 58/191 (30%), Gaps = 17/191 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + +K + F + L P LFD F Y + I + + K++
Sbjct: 325 IFLNRKTNVFHTMLVSLFLILLVAPLF-----LFDIGFQLSYIALFFILWLQPMLKIL-- 377
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
WK S + F + I + A I +FH P + N++ IP
Sbjct: 378 --------WKPKSELVAYFWDII--TVSFAAQIGAMPLSIYYFHQFPGLFFVTNLVLIPC 427
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
L ++ L+ IL + + +A + + I+ +
Sbjct: 428 LMVIMAIGVLLMILAYFDFVPVLLSKTVALSITFTNTYINWIASIETFVIKNIPLNFWLL 487
Query: 182 TIVVEFLLMVF 192
+
Sbjct: 488 IASYLVIFSCI 498
>gi|300118682|ref|ZP_07056410.1| DNA internalization-related competence protein [Bacillus cereus
SJ1]
gi|298723931|gb|EFI64645.1| DNA internalization-related competence protein [Bacillus cereus
SJ1]
Length = 773
Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P ++ G+ RLS + + F Y + IG+
Sbjct: 270 IYMILAGASPSVIRASVTGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTSILLYHFGYYSPYS 381
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P +I ++ M + L V++ GL+
Sbjct: 382 IFLNILYVPFLSLIVLPCSIIVLICMPIIPFLAKSFANVLSIGLNFSNDFLSYCESLP-- 439
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 440 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMMFISAGIFLFISTGHYVYPYFRE 498
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 499 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 541
>gi|197284611|ref|YP_002150483.1| hypothetical protein PMI0717 [Proteus mirabilis HI4320]
gi|194682098|emb|CAR41675.1| putative membrane protein [Proteus mirabilis HI4320]
Length = 789
Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 73/248 (29%), Gaps = 27/248 (10%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P+ + L P +F + + AI +Y + +
Sbjct: 338 FLPWQWAIWSAAVILLLDPLAILS-----ASFWLSFSAVFAIIVWYWLYPLNKRFSQQKR 392
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W ++ + F F ++ L+ N+ A+PI+SF+ +
Sbjct: 393 WFVIRLIH------------LQLGLLIILLPFQYYLFGGGNLFSLLVNLWAVPIISFITV 440
Query: 128 PAGLIAILLMILSLDNIPFGV-MAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTIVV 185
P + + L + + ++ A + ++ + +
Sbjct: 441 PLIMCGLFTAFLPVLQPIIWSWVDQSINWAFFCAPYFLTYWQPCGAVP-----WLFALSG 495
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
L+V + RH I+I I + +S D I L +++K
Sbjct: 496 IMTLLVIKMSWWRHHVIILITIATFLYCELSFSKRYDWRITMLDIGHGLAIIIEKEGEAV 555
Query: 243 NYSNPPSF 250
Y +
Sbjct: 556 IYDTGIRW 563
>gi|145636733|ref|ZP_01792399.1| DNA mismatch repair protein [Haemophilus influenzae PittHH]
gi|145270031|gb|EDK09968.1| DNA mismatch repair protein [Haemophilus influenzae PittHH]
Length = 788
Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPIQLFTVVVGFLLFCNPLMPLS-----VSFWLSCGAVGCLILWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + L+ G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWILSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT- 182
F+++P L A+ +A G+ +I + + F+T
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWLTVSFNLALFLTA 462
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 463 LCAGIFMLIIWR 474
>gi|145633377|ref|ZP_01789107.1| DNA mismatch repair protein [Haemophilus influenzae 3655]
gi|145635246|ref|ZP_01790950.1| recombination protein 2 [Haemophilus influenzae PittAA]
gi|229845399|ref|ZP_04465530.1| recombination protein 2 [Haemophilus influenzae 6P18H1]
gi|144985940|gb|EDJ92542.1| DNA mismatch repair protein [Haemophilus influenzae 3655]
gi|145267525|gb|EDK07525.1| recombination protein 2 [Haemophilus influenzae PittAA]
gi|229811707|gb|EEP47405.1| recombination protein 2 [Haemophilus influenzae 6P18H1]
Length = 788
Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPIQLFTVVVGFLLFCNPLMPLS-----VSFWLSCGAVGCLILWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + L+ G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWILSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT- 182
F+++P L A+ +A G+ +I + + F+T
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWLTVSFNLALFLTA 462
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 463 LCAGIFMLIIWR 474
>gi|320354422|ref|YP_004195761.1| DNA internalization-like competence protein ComEC/Rec2
[Desulfobulbus propionicus DSM 2032]
gi|320122924|gb|ADW18470.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfobulbus propionicus DSM 2032]
Length = 850
Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/307 (13%), Positives = 93/307 (30%), Gaps = 37/307 (12%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSI-PKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
LF +F + + +I Y P +I +++ + W + + +K + +
Sbjct: 365 ALFTASFQLSFAAVLSINLIYPRLPILISDADTEHAWYKQLQTGLK---TVQSLLYVSLA 421
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVM 149
+A L+ HF+ + G + N+L P+L +P GL+AI + L+ L ++ F +
Sbjct: 422 ATAGTVPILLYHFNRFSLIGPLMNLLIEPLLCLWALPFGLVAIPFIWLAPDLSHVLFYLG 481
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIP---------------------------ETSFVT 182
+ G+++ + + + P S
Sbjct: 482 SLGIELAVGMTNWADGFSFASVWTITPNIWEIVLYVSLLWLLLQRRLTMRRTLLTASLTV 541
Query: 183 IVVEFLLMVFCKTNIR-HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
+++ + R + + I ++L+ G D I
Sbjct: 542 LLLGLFTRGLWRPPTRDELAVYFLDIGQGTATLLQLPGGKNILVDGGGYRTERFDPGQSI 601
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
P + W+ + H + + ++ + P K +
Sbjct: 602 IA---PFLWRQRIWRLDDLIVTHPHGDHYNGLPFVVGRFKPRRLIVNDDPGKEPAYDRFL 658
Query: 302 CVGCHRS 308
Sbjct: 659 SKVRQAG 665
>gi|163753197|ref|ZP_02160321.1| competence protein [Kordia algicida OT-1]
gi|161326929|gb|EDP98254.1| competence protein [Kordia algicida OT-1]
Length = 678
Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 17/163 (10%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + T L P LFD F Y + AI + + K +
Sbjct: 324 RRETNTLQVLTVSMFFLLLFKPHF-----LFDVGFQLSYAAVFAIVWLQPLWKKL----- 373
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W S + +SF + + + +FH P +AN+ IP+L
Sbjct: 374 -----WNPTSFLPKSFWS--LLTVSFSAQLGVLPLSLYYFHQFPGLFFVANLTIIPVLGV 426
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
++ L+ +L L + + + + I+
Sbjct: 427 ILALGILVIVLAYFQLLPEFLSMLYRFIIQQMNVFVSWIASHD 469
>gi|146299185|ref|YP_001193776.1| ComEC/Rec2-related protein [Flavobacterium johnsoniae UW101]
gi|146153603|gb|ABQ04457.1| ComEC/Rec2-related protein [Flavobacterium johnsoniae UW101]
Length = 678
Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 13/161 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F Y + I + WK + N + +
Sbjct: 352 LFDVGFQLSYLALFFIVWLQP----------ELNKIWKPKNKFILYIWNAL--TVSFAAQ 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH P + NI+ +P+LSF++I ++ I + S I + +
Sbjct: 400 IGTLPLCLYYFHQFPGLFFVTNIIILPVLSFIMIAGIIVMIFAIFKSPPEILVYIFEKSI 459
Query: 154 DIIIHIAHRISVAHNEFCIG-RIPETSFVTIVVEFLLMVFC 193
I+ + H ++ + G +T+ + +
Sbjct: 460 FILNQLIHYVASFESFVIQGISFNFYYLITLYLVIISATIW 500
>gi|95931407|ref|ZP_01314116.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfuromonas acetoxidans DSM 684]
gi|95132544|gb|EAT14234.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfuromonas acetoxidans DSM 684]
Length = 783
Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 28/252 (11%)
Query: 2 LSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
L++ ++ P +I + L P LF +F + G++A+
Sbjct: 317 LTVRHRHVRPDDLLYSIALLILLVKPLA-----LFGASFQLSFAGVAALILVLP------ 365
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
TW+ + + + + + + HFH + L+ N+ A+P
Sbjct: 366 --------TWRDWQQHRWQRWLALPPLVTLTATVATLPIALWHFHVLAPAALVNNLYAVP 417
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWG--LDIIIHIAHRIS-VAHNEFCIGRIPE 177
++ V++P L+A L+ L P G L+ I+ +A IS +
Sbjct: 418 LVGLVILPVTLLATALLATGLPGAPLLFHTAGDLLNGILSVATTISQGFLAAQRLYLTVP 477
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
V + L+ + R + + + S P L L AL
Sbjct: 478 HHLVLAGISITLLALLAKHRRLTVASLTTTLLGGAILGVTSMPPSTL-----QLSALSVG 532
Query: 238 NTLISNYSNPPS 249
Sbjct: 533 QGDCLLLQRANG 544
Score = 36.7 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 70/266 (26%), Gaps = 9/266 (3%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P T+ +L P PG FD+ GISA GY S ++ +
Sbjct: 129 HCPLLPGDTLSWTGKLRRPRRFGTPGEFDYPRYLANLGISASGYITSSKQIEVKHPTTIP 188
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + I I + ++ + ++ + I
Sbjct: 189 SPLVAVERWRSQLGQAIATKINHPQTPFLISLVLGEKSRLTP-AQRQDLAQFGLSHLFAI 247
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHI----AHRISVAHNEFCIGRIPETSFVTI 183
+ +L +L L + + ++ A + + + + T
Sbjct: 248 SGLHLGLLASMLYL--VVQKLYRRSTRALMWCPLQQAVAVLILPPLLFYLLLSGGALPTW 305
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
L+ + +RH + + P L L + LI
Sbjct: 306 RAGLLIALAAWLTVRHRHVRPDDLLY-SIALLILLVKPLALFGASFQL-SFAGVAALILV 363
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHV 269
+ +W+ L P
Sbjct: 364 LPTWRDWQQHRWQRWLALPPLVTLTA 389
>gi|260641965|ref|ZP_05414144.2| competence protein [Bacteroides finegoldii DSM 17565]
gi|260623918|gb|EEX46789.1| competence protein [Bacteroides finegoldii DSM 17565]
Length = 694
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/199 (12%), Positives = 61/199 (30%), Gaps = 30/199 (15%)
Query: 9 DPFPA--ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
PF + L P+ GLFD F + +++I
Sbjct: 327 QPFSLNTLAVTAWLMLLCNPA-----GLFDVGFQLSFLAVASILLIQRP----------- 370
Query: 67 TWTWKKISSIKQSFLNEI--RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ +++ + ++ + ++ +F V+ L+ N+L IP+++
Sbjct: 371 ---VYRLFAVRNRVGKSVWGLMSVSIAAQIGTAPLVMFYFSRFSVHFLLTNLLVIPLITI 427
Query: 125 VVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG----RIPETS 179
++ A + +LL L + L+ + + G ++
Sbjct: 428 ILY-AAIFMLLLTPFPWLQIWAVVGVRKLLEGLNLFVRWVEQLPCSSVDGIWLYQLEVCG 486
Query: 180 FVTIVVEFLLMVFCKTNIR 198
+ + +R
Sbjct: 487 IYVFLFGAVCYCL-HRRLR 504
>gi|150390808|ref|YP_001320857.1| ComEC/Rec2-related protein [Alkaliphilus metalliredigens QYMF]
gi|149950670|gb|ABR49198.1| ComEC/Rec2-related protein [Alkaliphilus metalliredigens QYMF]
Length = 488
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 23/195 (11%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++YD + I + P LF +F + +I Y
Sbjct: 311 RRRYDSINMLCLVAVILLIINPLQ-----LFSISFQLSFVATLSILLLYKP--------- 356
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS- 123
++ S+ + + I + HF + V L+ NI +PIL+
Sbjct: 357 ----ICDRLGSLPKKVKQLM--AITLAAQIGTIPIIAYHFQQVSVVSLLTNIAIVPILAP 410
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+++ AI + L + + L I I + F I
Sbjct: 411 LLIVALCGFAISFISFGLSQLIAYSVNGLLSYIFWIMEGANQIP--FSSLSTGAIDIFVI 468
Query: 184 VVEFLLMVFCKTNIR 198
+ +L++ + N+R
Sbjct: 469 LCYYLILTAIRLNLR 483
>gi|315224125|ref|ZP_07865965.1| competence protein [Capnocytophaga ochracea F0287]
gi|314945858|gb|EFS97867.1| competence protein [Capnocytophaga ochracea F0287]
Length = 636
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 14/135 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F Y + +I FY + + W+ + Q + +G
Sbjct: 351 LYDVGFQLSYAAVFSIMKFYPVMRK----------WWQPENKYLQWIWSLFL--VGLSAQ 398
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
+ +FH P+ ++N++ +P+L ++I G+IA+ L + V+
Sbjct: 399 IVVLPISLYYFHQFPILFFVSNLVVVPLLQPILI-GGIIALCLGSFGILPYAIVFVLEKL 457
Query: 153 LDIIIHIAHRISVAH 167
+ ++ + I+
Sbjct: 458 IALMNFLVAFIAHQE 472
>gi|253688155|ref|YP_003017345.1| DNA internalization-related competence protein ComEC/Rec2
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754733|gb|ACT12809.1| DNA internalization-related competence protein ComEC/Rec2
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 763
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 80/263 (30%), Gaps = 39/263 (14%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+ +S P +F ++++ +++ + + ++ W W + ++
Sbjct: 324 ALILVSDPLSVLS-----DSFWLSCLAVASLIFWFQWAPLPHRLQTRRRWFWLRWIHLQT 378
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
+ + FH + L AN+ A+P++SFV P L+A+ M
Sbjct: 379 GI------------TLLLMPLQLHIFHGFSITSLPANLWAVPLVSFVTTPLILLALSTMA 426
Query: 139 L-SLDNIPFGVMAWGLDIIIHIAHRISV----AHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L + + + L ++ + +G + V I
Sbjct: 427 FVPLGEMLWWLADISLRVVFAPLTYLQTGWIYLDASLLLGSVAGWGAVVI---------- 476
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFS---PDLLI---SEKGNLVALVDKNTLISNYSNP 247
R + I ++IL + P + L ++++ Y
Sbjct: 477 -WRFRWWRIHPMSIGVLILVLLAFRIKSNEPAWRVDMLDVGHGLAIVIEQRGKAVLYDTG 535
Query: 248 PSFIFSQWKSALITPFHEAPHVQ 270
+ + I P+ V
Sbjct: 536 NRWEGGDMATREILPYLRWRGVD 558
>gi|226224083|ref|YP_002758190.1| integral membrane protein ComEC [Listeria monocytogenes Clip81459]
gi|225876545|emb|CAS05254.1| Putative integral membrane protein ComEC [Listeria monocytogenes
serotype 4b str. CLIP 80459]
Length = 740
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 88/234 (37%), Gaps = 16/234 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P +I ++ + +Q I
Sbjct: 289 WSSFSAICLSFILFFLLQPYIIREVGFQLSYAVSFGIILSSRQILTRQQNAFTKSLAISF 348
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S ++ HF+ G+ N++ +PI + +++P L +L S + + P +
Sbjct: 349 ISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHFPEAM 408
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + ++ + + + ++ + P T + + + +++VF + +G +
Sbjct: 409 LTFFIQLVEKLTYIFAKIPHQTIVTGRPNTVILVLTIITIIIVFSQWQKKKFPLGIFICF 468
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ L +F +S + +G+ + + ++ + + F W
Sbjct: 469 CLLCYLASFNFSGKVSFIDVGQGDSILIQLPYNQGNYLIDTGGQLPFEKEAWAK 522
>gi|260582021|ref|ZP_05849816.1| recombination protein 2 [Haemophilus influenzae NT127]
gi|260094911|gb|EEW78804.1| recombination protein 2 [Haemophilus influenzae NT127]
Length = 788
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 69/192 (35%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y PF T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPFQLFTLVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLILWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + L+ +G + + F+ + + G +AN++A+P+ S
Sbjct: 351 SLFQWKNRPFSPKVRWILSLFHLQLGLLLFFT--PLQLFLFNGLSLSGFLANLIAVPLYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
F ++P L A+ + I +A L + I ISV + F+T
Sbjct: 409 FFLVPLILFAV----FTNGAIFSWQLANKLAEV--ITGLISVFQGNWLTVSFNLALFLTA 462
Query: 184 VVEFLL-MVFCK 194
+ + ++ +
Sbjct: 463 LCGGIFMLIIWR 474
>gi|94309988|ref|YP_583198.1| DNA internalization-related competence protein ComEC/Rec2
[Cupriavidus metallidurans CH34]
gi|93353840|gb|ABF07929.1| DNA internalization-related competence protein ComEC/Rec2
[Cupriavidus metallidurans CH34]
Length = 851
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 68/260 (26%), Gaps = 30/260 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ P GIA P PG F + ++ I F
Sbjct: 353 RMPPPTVVLAWAAGIAVAIDPWAVMSPG-----FWLSFGAVAVI--FLGARGDGSGDGGA 405
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYG----------SASASIFLIKHFHCIPVYGLIAN 115
S ++ + IG + + F + V + AN
Sbjct: 406 VEERQADPKSCVSRCVSRWVSRIGGVAAEAARTQWSVTIGLVPLTLLLFGQVSVVSVFAN 465
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
+AIP++S +V P L +L + L+ ++ ++
Sbjct: 466 AVAIPVVSLLVTPLALAGAVL-PPGWAAPLLWIAHKALEWLVGGLAWLAAPAWAVWEAAH 524
Query: 176 PETSFVTIVVEFLLMVFCKTNI------------RHIGSIMIGITIIILFTFPYSFSPDL 223
P + + + ++ R +G +++ + +
Sbjct: 525 PGPVATGLALAGVYVLLIPRPSDAKGARRVQIVPRWLGVLLMVPMLSAGPEPVEEGEMRV 584
Query: 224 LISEKGNLVALVDKNTLISN 243
+ G A++ +
Sbjct: 585 TALDVGQGAAVLVETRRHVL 604
Score = 37.5 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 76/239 (31%), Gaps = 13/239 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW-KK 72
RL P G A P FD+ + +GI A GY + + + +
Sbjct: 159 GQRHRLTVRLRRPRGLANPHGFDYGYWLLAEGIGATGYVRHGQLLNRDAAMPLSIRITQW 218
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-----IANILAIPILSFVVI 127
+ ++ + ++ A + + + + I+++++I L +I
Sbjct: 219 RAGLRDRLWAALPSDAQYRAVLVALVIGDQRGIGQADWDVFRRTGISHLVSISGLHITMI 278
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDII-----IHIAHRISVAHNEFCIGRIPETSFVT 182
+ A+ M+ + L +I + + + A I + + T
Sbjct: 279 SGAVAALAGMLWRHSFGIGRKLRRPLPLIWPAQKVAMVVAVQTALGYGLIAGMQIPALRT 338
Query: 183 IVVEFLLMV-FCKTNIRHIGSIMIGITIIILFTFPYSF-SPDLLISEKGNLVALVDKNT 239
+ + + V + ++ I + P++ SP +S V +
Sbjct: 339 VSMLMVAAVALWSGRMPPPTVVLAWAAGIAVAIDPWAVMSPGFWLSFGAVAVIFLGARG 397
>gi|170733465|ref|YP_001765412.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia MC0-3]
gi|169816707|gb|ACA91290.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia MC0-3]
Length = 829
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 73/247 (29%), Gaps = 18/247 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ G L+ P G F + ++ I + + + +
Sbjct: 345 RSVPTSAVLCAALGGVLLADPWAVLSAG-----FWLSFGAVAVILLAVAGWRPVREVDDI 399
Query: 66 NTW----------TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
+ +W + + + + + + F + + G N
Sbjct: 400 DEAGAEGGTTGLRSWLRGWATRGRRRLAEATRVQYAVTIGLAPLTAAWFAQVSLSGPFGN 459
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
AIP +S VV P L I L LD F + L+ ++ + ++ R+
Sbjct: 460 AFAIPWVSSVVTPVVLAGIAL-PPPLDAAAFRLAHAALEPMMTLLGYLADWPAGVFWLRM 518
Query: 176 PETSFVTIV-VEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
P+ + + V + + +R + + P L + + G A
Sbjct: 519 PDWPVLALACVGVAWALMPRGWPLRWAAPLTWLPLVAPAPDAPPPGGFRLTVLDVGQGAA 578
Query: 234 LVDKNTL 240
++ +
Sbjct: 579 VLVETAR 585
>gi|329121283|ref|ZP_08249910.1| competence protein EC [Dialister micraerophilus DSM 19965]
gi|327470217|gb|EGF15680.1| competence protein EC [Dialister micraerophilus DSM 19965]
Length = 727
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D +F + I FY ++ K+ I A +
Sbjct: 346 DISFQLSVGASAGILIFYKPIEI-------------KLQKIISYKRITQAAALSISAQLL 392
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLD 154
++ +FH P+Y + +NI P+L FV+I AI + IL L + + L+
Sbjct: 393 IVPIILYNFHNFPIYFIFSNIFVTPLLDFVIIFGLTAAIFVWILPPLSGGILYITDYILE 452
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ I H I+ + S V +L V+ IR
Sbjct: 453 FSLTINHFIANLPKARYLTGGMNLSEVLTYYGAILFVYVNKKIR 496
>gi|254931417|ref|ZP_05264776.1| comEC/Rec2 family protein [Listeria monocytogenes HPB2262]
gi|293582967|gb|EFF94999.1| comEC/Rec2 family protein [Listeria monocytogenes HPB2262]
gi|332311924|gb|EGJ25019.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
monocytogenes str. Scott A]
Length = 719
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 88/234 (37%), Gaps = 16/234 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P +I ++ + +Q I
Sbjct: 268 WSSFSAICLSFILFFLLQPYIIREVGFQLSYAVSFGIILSSRQILTRQQNAFTKSLAISF 327
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S ++ HF+ G+ N++ +PI + +++P L +L S + + P +
Sbjct: 328 ISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHFPEAM 387
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + ++ + + + ++ + P T + + + +++VF + +G +
Sbjct: 388 LTFFIQLVEKLTYIFAKIPHQTIVTGRPNTVILVLTIITIIIVFSQWQKKKFPLGIFICF 447
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ L +F +S + +G+ + + ++ + + F W
Sbjct: 448 CLLCYLASFNFSGKVSFIDVGQGDSILIQLPYNQGNYLIDTGGQLPFEKEAWAK 501
>gi|254852106|ref|ZP_05241454.1| comEC/Rec2 family protein [Listeria monocytogenes FSL R2-503]
gi|300764853|ref|ZP_07074843.1| comE operon protein 3 [Listeria monocytogenes FSL N1-017]
gi|258605408|gb|EEW18016.1| comEC/Rec2 family protein [Listeria monocytogenes FSL R2-503]
gi|300514529|gb|EFK41586.1| comE operon protein 3 [Listeria monocytogenes FSL N1-017]
Length = 719
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 88/234 (37%), Gaps = 16/234 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P +I ++ + +Q I
Sbjct: 268 WSSFSAICLSFILFFLLQPYIIREVGFQLSYAVSFGIILSSRQILTRQQNAFTKSLAISF 327
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S ++ HF+ G+ N++ +PI + +++P L +L S + + P +
Sbjct: 328 ISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHFPEAM 387
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + ++ + + + ++ + P T + + + +++VF + +G +
Sbjct: 388 LTFFIQLVEKLTYIFAKIPHQTIVTGRPNTVILVLTIITIIIVFSQWQKKKFPLGIFICF 447
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ L +F +S + +G+ + + ++ + + F W
Sbjct: 448 CLLCYLASFNFSGKVSFIDVGQGDSILIQLPYNQGNYLIDTGGQLPFEKEAWAK 501
>gi|47094096|ref|ZP_00231821.1| comE operon protein 3, putative [Listeria monocytogenes str. 4b
H7858]
gi|47017526|gb|EAL08334.1| comE operon protein 3, putative [Listeria monocytogenes str. 4b
H7858]
Length = 719
Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 88/234 (37%), Gaps = 16/234 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P +I ++ + +Q I
Sbjct: 268 WSSFSAICLSFILFFLLQPYIIREVGFQLSYAVSFGIILSSRQILTRQQNAFTKSLAISF 327
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S ++ HF+ G+ N++ +PI + +++P L +L S + + P +
Sbjct: 328 ISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHFPEAM 387
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + ++ + + + ++ + P T + + + +++VF + +G +
Sbjct: 388 LTFFIQLVEKLTYIFAKIPHQTIVTGRPNTVILVLTIITIIIVFSQWQKKKFPLGIFICF 447
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ L +F +S + +G+ + + ++ + + F W
Sbjct: 448 CLLCYLASFNFSGKVSFIDVGQGDSILIQLPYNQGNYLIDTGGQLPFEKEAWAK 501
>gi|46907710|ref|YP_014099.1| comEC/Rec2 family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|46880979|gb|AAT04276.1| comEC/Rec2 family protein [Listeria monocytogenes serotype 4b str.
F2365]
Length = 719
Score = 71.4 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/234 (13%), Positives = 88/234 (37%), Gaps = 16/234 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P +I ++ + +Q I
Sbjct: 268 WSSFSAICLSFILFFLLQPYIIREVGFQLSYAVSFGIILSSRQIVTRQQNAFTKSLAISF 327
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S ++ HF+ G+ N++ +PI + +++P L +L S + + P +
Sbjct: 328 ISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHFPEAM 387
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + ++ + + + ++ + P T + + + +++VF + +G +
Sbjct: 388 LTFFIQLVEKLTYIFAKIPHQTIVTGRPNTVILVLTIITIIIVFSQWQKKKFPLGIFICF 447
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ L +F +S + +G+ + + ++ + + F W
Sbjct: 448 CLLCYLASFNFSGKVSFIDVGQGDSILIQLPYNQGNYLIDTGGQLPFEKEAWAK 501
>gi|108757945|ref|YP_630845.1| DNA internalization-related competence protein ComEC/Rec2
[Myxococcus xanthus DK 1622]
gi|108461825|gb|ABF87010.1| DNA internalization-related competence protein ComEC/Rec2
[Myxococcus xanthus DK 1622]
Length = 822
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/214 (10%), Positives = 60/214 (28%), Gaps = 7/214 (3%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGS 93
D + + + + + + ++ + + +
Sbjct: 355 DLSLRLSFLAVLGLVLLSPPLRQALPLAEPDPSEPHRVRRWWGQAQETVAQTLCASAAAT 414
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
S + F + + GLI+N++A+P+ + A A L ++ L AW
Sbjct: 415 LSGLPIVAATFGRVSIAGLISNVVALPLCGLLTGLAAGGAALFVVAPVLATPVLWAGAWA 474
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++++ I + A L R G + + +
Sbjct: 475 SELLLVITRLFAAAPLASVEVPSLGFLSALYAAGLLTWALGTGRWRLGGLLAPAAVVAAI 534
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN 246
+ P L + + + + ++ +
Sbjct: 535 LAPVLTPQPGLRV----TFLYVGQGDGVVVSSGG 564
>gi|229019550|ref|ZP_04176366.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1273]
gi|229025791|ref|ZP_04182190.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1272]
gi|228735499|gb|EEL86095.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1272]
gi|228741716|gb|EEL91900.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1273]
Length = 669
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 43/183 (23%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ I P +I G+ RLS + + F+ F
Sbjct: 166 LYMIIAGASPSVVRASITGVLLLVAFICSVRLSSLDALSITAICMLIYDPYLIFNIGFQF 225
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ S +I+ + I ++ L+
Sbjct: 226 SF--VGSFALLLSAPILLARSNG----------AIRNTIY------ISVVSQLVSTPILL 267
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF Y + N+L +P LS +V+P ++ +L M + +A G+ ++ I
Sbjct: 268 YHFGYFSPYSIFLNLLYVPFLSILVLPCSIVILLCMPI------IPFLAKGIAYVLSICL 321
Query: 162 RIS 164
+S
Sbjct: 322 TVS 324
>gi|319952474|ref|YP_004163741.1| comec/rec2-related protein [Cellulophaga algicola DSM 14237]
gi|319421134|gb|ADV48243.1| ComEC/Rec2-related protein [Cellulophaga algicola DSM 14237]
Length = 669
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 17/166 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + + F L P LF F Y + AI + Y +
Sbjct: 321 MYLNRPTNSFNILALSLFFILLVKP-----TYLFQVGFQMSYSAVFAIIWIYPKLQRF-- 373
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
W + + + F ++ + +FH P IAN+L IP
Sbjct: 374 --------WYPKNKVIRYFWQ--LLSVSIAAQLGVLPISLFYFHQFPGLFFIANLLIIPF 423
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
L ++ ++ IL + L + + + + I I+
Sbjct: 424 LGIILGIGIVVLILSLTNLLPSFITDGYNYIISTMNTIVKWIASQD 469
>gi|309781219|ref|ZP_07675956.1| DNA internalization-related competence protein ComEC/Rec2
[Ralstonia sp. 5_7_47FAA]
gi|308920040|gb|EFP65700.1| DNA internalization-related competence protein ComEC/Rec2
[Ralstonia sp. 5_7_47FAA]
Length = 839
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 77/288 (26%), Gaps = 16/288 (5%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + P G F + ++ I + + +
Sbjct: 349 DRNVPASLSLCWAAAAVAVMDPWAVMSAG-----FWLSFGAVAIIFIAAQM-----ALDG 398
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
H + + + +++ R I + + F V + AN LAIP +SF
Sbjct: 399 HRSENAGWVGATRRALAGGTR--IQFAVTFGLLPLTLLLFQQTSVVSVAANGLAIPAVSF 456
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V P LI L L + ++ ++ + + V +
Sbjct: 457 VTTPLALIGAAL-PDPLAQPVLALAEASFRWLVVWLEWLAKPRWSVWVAPVGPMWAVLLS 515
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+ + ++ +R G +++ P + LVA +
Sbjct: 516 MVAVALLLVPGGLRAWAWRAQGALLLLPLVLAREPLPS---PGEFRLVAFDIGQGAAALV 572
Query: 245 SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ A V L+ +L + S +
Sbjct: 573 ETANHRLLFDTGPRYGDHADAAARVIAPYLRAHGVEALDTLAVSHEDN 620
>gi|73747979|ref|YP_307218.1| DNA internalization-related competence protein,ComEC
[Dehalococcoides sp. CBDB1]
gi|73659695|emb|CAI82302.1| DNA internalization-related competence protein,ComEC
[Dehalococcoides sp. CBDB1]
Length = 796
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 68/192 (35%), Gaps = 9/192 (4%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI-YSS 62
+ ++ + PA + PS L+ +F + + + Y + K +
Sbjct: 308 LGRQKNAMPALCLAAAVMVAFSPSI-----LWSVSFQLSFMSMLGLILVYPMLKKLNIRL 362
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ L+ + ++ L+ +F I + G +A +LA+P +
Sbjct: 363 LDRLGLAEGIFRATLGLVLDGLAVSLAAIAGI--WPVLLYYFENISLIGPVATLLAMPAM 420
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAW-GLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
F+++ + L A+L ++ I G + W ++ + + G P +
Sbjct: 421 PFIIVLSFLTALLGLVFPAGAIFMGYLTWLPCRYMLVVVSLTASVPGVLMSGLRPGAMLM 480
Query: 182 TIVVEFLLMVFC 193
I L M++
Sbjct: 481 GIYYFLLGMLYW 492
>gi|163790314|ref|ZP_02184746.1| comEC/Rec2 family protein [Carnobacterium sp. AT7]
gi|159874385|gb|EDP68457.1| comEC/Rec2 family protein [Carnobacterium sp. AT7]
Length = 584
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 95/251 (37%), Gaps = 21/251 (8%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYK--GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
AR+ P + F + I +IG+ S + ++ +
Sbjct: 293 ARIRKPISGLDAWSWTLIFGLWLNPYQIFSIGFQLSYLLSLTLMLFSDSLFN------RS 346
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
+ I + + L HF G+ AN++ +P+ ++VV+P +
Sbjct: 347 KLASINNVVISFILTLISIPILSFHFFEFSWIGMFANLIFVPLFTWVVMPLSIFLFASSY 406
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHR----ISVAHNEFCI-GRIPETSFVTIVVEF-LLMVF 192
L + F ++ ++ ++ + I + + G++P F+ +++ L +V
Sbjct: 407 LLSGTLFFHFLSNLMESLLEMTEWLVLKIKLFPYSTIVTGKVPFGLFILMIIGLILFIVA 466
Query: 193 CKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALV-----DKNTLISNYS 245
+ + S+++ + + +F + ++P ++L+ + G A++ + +
Sbjct: 467 LEGRKKIKRSVVLLVVVFTIFIYYQKYNPFGEVLVLDVGQGDAILIKKPFGAGVYLIDTG 526
Query: 246 NPPSFIFSQWK 256
+F +W+
Sbjct: 527 GAMAFEKEEWQ 537
>gi|269122260|ref|YP_003310437.1| ComEC/Rec2-related protein [Sebaldella termitidis ATCC 33386]
gi|268616138|gb|ACZ10506.1| ComEC/Rec2-related protein [Sebaldella termitidis ATCC 33386]
Length = 454
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR--ANIGT 90
LFD +F Y + +I + Y + + +YS++ IK +F+N I A +
Sbjct: 281 SLFDISFQLSYGAVGSILFIYPVFERLYSAKC----------RIKDNFINHILKTALLSF 330
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
+ +F +PV+ + NI+ IP+ ++I + +LL + ++
Sbjct: 331 VIQIMTFPVFLYNFQTMPVFSFLCNIVGIPL-GTLLIQLIFLVLLLNVFGIE 381
>gi|319775004|ref|YP_004137492.1| recombination protein 2 [Haemophilus influenzae F3047]
gi|317449595|emb|CBY85800.1| recombination protein 2 [Haemophilus influenzae F3047]
Length = 788
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPLQLFTVVVGFLLFCNPLMPLS-----VSFWLSCGAVGCLILWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + L+ G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWILSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT- 182
F+++P L A+ +A G+ +I + + F+T
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWLTVSFNLALFLTA 462
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 463 LCAGIFMLIIWR 474
>gi|57233639|ref|YP_180779.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides ethenogenes 195]
gi|57224087|gb|AAW39144.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides ethenogenes 195]
Length = 795
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 81/255 (31%), Gaps = 31/255 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ + PA + PS L+ +F + + + Y + K + +
Sbjct: 308 LGRQKNAMPALCLAAAVMVAFTPSI-----LWSVSFQLSFMSMLGLILVYPMLKEL--NL 360
Query: 64 SHNTWTWKKISSIKQSFLNEIR-ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
++ + + + A L+ +F I + G +A +LA+P +
Sbjct: 361 RLLERFGLSEGILRTALGIVLDGLGVSLAAIAGIWPVLLYYFENISLIGPVATLLAMPAM 420
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAW-GLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
F+++ + L A+L ++ + G +AW ++ + + G P +
Sbjct: 421 PFIIVLSFLTALLGLVFPAGAVFMGYLAWLPCRYMLTVVSLTASLPGVLLAGIRPGAILM 480
Query: 182 TIVVEFLLMVFCK---------------------TNIRHIGSIMIGITIIILFTFPYSFS 220
I FLL V + +G + +
Sbjct: 481 GIYY-FLLGVLYRAYKHFLKIPARSHANPSSAIKLRWVLVGMAVPVLVFSFGLNPSADQK 539
Query: 221 PDLLISEKGNLVALV 235
+ + G A++
Sbjct: 540 MHVYFLDVGQGDAIL 554
>gi|317479721|ref|ZP_07938843.1| competence protein [Bacteroides sp. 4_1_36]
gi|316904091|gb|EFV25923.1| competence protein [Bacteroides sp. 4_1_36]
Length = 678
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 69/201 (34%), Gaps = 17/201 (8%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
T+ A L P + LFD F + ++AI +Y+ + + +
Sbjct: 320 TLAATAFLMLLCKPVW--LFDVGFQLSFSAVAAIVLVQP---KLYALWKVDNRFLRYLWG 374
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ + + +I +F + L+ N+ IP++S V+ A + +L
Sbjct: 375 L---------MTVSVAAQLGTAPLVIFYFSRFSTHFLLTNLWVIPMVSLVLYSAVFLLML 425
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVT--IVVEFLLMVF 192
+ + ++ V+ + + + I + + + + F
Sbjct: 426 TPLPFVQHLFARVVEALVHVQNEVLRWIEHLPGAAVDDIWLDIWGVLLVYLFLGMAYYGF 485
Query: 193 CKTNIRHIGSIMIGITIIILF 213
+ +R + ++ + ++ +
Sbjct: 486 LRLTVRRVCFALLALLAVVSW 506
>gi|261821320|ref|YP_003259426.1| hypothetical protein Pecwa_2040 [Pectobacterium wasabiae WPP163]
gi|261605333|gb|ACX87819.1| DNA internalization-related competence protein ComEC/Rec2
[Pectobacterium wasabiae WPP163]
Length = 763
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 67/197 (34%), Gaps = 35/197 (17%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+ +S P +F ++++ +++ + Y ++ W W + ++
Sbjct: 324 ALILVSDPLSVLS-----DSFWLSCLAVASLIFWFQWVPLPYRLQTQRRWFWLRWIHLQT 378
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
+ + FH + + L AN+ A+P+++FV P L+A+ +
Sbjct: 379 GI------------TLLLMPLQLHIFHGVSITSLPANLWAVPLVTFVTTPLILLALSTIA 426
Query: 139 LS-LDNIPFGVMAWGLDIIIH----------------IAHRISVAHNEFCIGRIPETSFV 181
S L + + + L ++ + I+ I R
Sbjct: 427 FSPLSEMLWWLADVSLRVVFAPLTYLQTGWVYLDASLLIGSIAGW-GAVVIWRFSWWRCY 485
Query: 182 TIVVEFLLMVFCKTNIR 198
+ + L++V I+
Sbjct: 486 PMSIGALILVLLVFRIK 502
>gi|254498826|ref|ZP_05111536.1| DNA uptake/competence protein ComA [Legionella drancourtii LLAP12]
gi|254351957|gb|EET10782.1| DNA uptake/competence protein ComA [Legionella drancourtii LLAP12]
Length = 709
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/231 (12%), Positives = 76/231 (32%), Gaps = 30/231 (12%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ P+ P F F + ++ + ++ S
Sbjct: 276 RFTPWQVWRYALLGVLCLEPHAA-----FMQGFYFSFLAVACLLLTQQRWQLKGYKGS-- 328
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ + + + G +AN+LAIP++SF++
Sbjct: 329 -------------------LALQLSCLIGLMPLTLYWYSYGSINGFLANLLAIPLVSFLI 369
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDII---IHIAHRISVAHNEFCIGRIPETSFVTI 183
+P LI +L+ S + ++W + ++ +H ++ + E+ I + E +
Sbjct: 370 VPLALITMLVSSYSWAWLLMKPLSWFIALLFNGLHWTEHLAALNLEWSIQSM-ELVLALM 428
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL 234
+ ++ R + + + + T S + + + G +A+
Sbjct: 429 GALLMWILLPINPFRWLALLWLLLPCFPPRTLVQSGEALVHVLDVGQGLAV 479
>gi|296333284|ref|ZP_06875737.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|296149482|gb|EFG90378.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
spizizenii ATCC 6633]
Length = 776
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 72/243 (29%), Gaps = 33/243 (13%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ I L F F +F+ +
Sbjct: 309 CLSYIVLLLFNPYYLFEAGFQLSFA---------------------VSFSLILSSSIFKR 347
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+K A + + L+ HF + + N++ +P +F V+P + +
Sbjct: 348 VKTFLGQ--LAMVSMIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCVLPGAIAGVF 405
Query: 136 LMILSLDN------IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
L+ LS+ +M+W +I IA I P + + + + ++
Sbjct: 406 LLSLSVSAGRLFFGWFDFLMSWANKLITKIAE----IDVFTIIIARPAPALLFLFIATII 461
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
++ R +M+ + P L + +++ + +++ +
Sbjct: 462 LLLMAIEKRSFSQLMVTGGMCCAVLSLLFIYPRLSSEGEVDMIDIGQGDSMYVGAPHQRG 521
Query: 250 FIF 252
+
Sbjct: 522 HVL 524
>gi|167586760|ref|ZP_02379148.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ubonensis Bu]
Length = 784
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/360 (11%), Positives = 93/360 (25%), Gaps = 24/360 (6%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ G L+ P G F + ++ I S + + +
Sbjct: 306 RSVPASSVLCAALGAVLLADPWAVLSAG-----FWLSFGAVAVILLAVSGWRAVQEPGAE 360
Query: 66 NTWT----WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + + + F I V G +AN AIP
Sbjct: 361 PEGAGFGERLRAWRRRAIRRVAEASRVQYAVTIGLAPLTAAWFAQISVSGPLANAFAIPW 420
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S VV P L + + LD F + LD ++ R++ +P+ +
Sbjct: 421 VSSVVTPIVLAG-IALPAPLDAAAFRLARASLDPMMAALERLADWPRSVFWLPMPDWPVL 479
Query: 182 TIV-VEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ V ++ + +R + + P L + + G A++ +
Sbjct: 480 MLACVGVAWVLLPRGWPLRWAAPLTWLPLVAPAPDRPPDGGFRLTVVDVGQGAAVLVETA 539
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
F + + + + + +
Sbjct: 540 R-----RTLLFDAGPGAESTHAGERIVAPFLRARGIRDLDTLVLSHADADHAGGAPAVYA 594
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ V + G +D + + +T +L QG
Sbjct: 595 AVEVRQLLGGMPAGHRLWRDAQAAG-------VASRVPCAAGQRWRWDGVTFTMLWPQGG 647
>gi|145642142|ref|ZP_01797711.1| recombination protein 2 [Haemophilus influenzae R3021]
gi|145273133|gb|EDK13010.1| recombination protein 2 [Haemophilus influenzae 22.4-21]
Length = 788
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPIQLFTVVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLILWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + + G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWIFSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G+ +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWFNVSFNLALVLTA 462
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 463 LCAGIFMLIIWR 474
>gi|313892614|ref|ZP_07826201.1| putative DNA internalization competence protein ComEC/Rec2-like
protein [Dialister microaerophilus UPII 345-E]
gi|313119011|gb|EFR42216.1| putative DNA internalization competence protein ComEC/Rec2-like
protein [Dialister microaerophilus UPII 345-E]
Length = 727
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 27/243 (11%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D +F + I FY ++ K+ I A +
Sbjct: 346 DISFQLSVGASAGILIFYKPIEI-------------KLGKIISYKRITQAAALSISAQLL 392
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLD 154
++ +FH P+Y + +NI P+L FV+I AI + IL L + + L+
Sbjct: 393 IVPIILYNFHNFPIYFIFSNIFVTPLLDFVIIFGLTAAIFVWILPPLSGGILYITDYILE 452
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR-----HIG--SIMIGI 207
+ I H I+ + S V +L V+ IR +IG S++ +
Sbjct: 453 FSLIINHFIANLPKARYLTGGMNLSEVLTYYGAILFVYVNKKIRKEKIMYIGSISLLSLL 512
Query: 208 TIIILFTFPYSFSPDLLISEKGNLV--ALVDKNTLISNYS-NPPSFIFSQW---KSALIT 261
I ++ ++I + G V ++ KN I Y F ++
Sbjct: 513 IITTIYLKITEEKEYVIIPDTGKTVSAGIISKNEKILYYEYKGNRFSGKEFKSVLEYYGI 572
Query: 262 PFH 264
Sbjct: 573 GET 575
>gi|251789910|ref|YP_003004631.1| hypothetical protein Dd1591_2310 [Dickeya zeae Ech1591]
gi|247538531|gb|ACT07152.1| DNA internalization-related competence protein ComEC/Rec2 [Dickeya
zeae Ech1591]
Length = 793
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 85/268 (31%), Gaps = 44/268 (16%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
G+ +S P +F ++A+ ++Y + ++W W + +
Sbjct: 355 GLILVSDPLSVLS-----DSFWLSALAVAALIFWYQWAPLPLHL--QHSWRWGWLRGLHM 407
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
+ FH + + L AN+ A+P++SFV P L+A+ LM+
Sbjct: 408 QIGVTLLLMPLQVLL----------FHGVSLSSLPANLWAVPLVSFVTTPLILLALPLMV 457
Query: 139 L-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT-------IVVEFLLM 190
+ + + + + L ++ + +P V +L +
Sbjct: 458 VPGIAQVLWWLADRSLALVF------------LPLQAMPAGWLSLGEHIVPYSVAGWLAV 505
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL-----ISEKGNLVALVDKNTLISNYS 245
+ + + +IL P L + L ++++ Y
Sbjct: 506 IVW--RFAWWRTYPFSLLALILMAALRPKPPVPLWRVDMLDVGHGLAVVIERQGKAWLYD 563
Query: 246 NPPSFIFSQWKSALITPFHEAPHVQKED 273
P + I P+ + +Q E
Sbjct: 564 TGPGWDGGNSAEREILPYLKWRGLQLEG 591
>gi|160890849|ref|ZP_02071852.1| hypothetical protein BACUNI_03294 [Bacteroides uniformis ATCC 8492]
gi|156859848|gb|EDO53279.1| hypothetical protein BACUNI_03294 [Bacteroides uniformis ATCC 8492]
Length = 678
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 69/201 (34%), Gaps = 17/201 (8%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
T+ A L P + LFD F + ++AI +Y+ + + +
Sbjct: 320 TLAATAFLMLLCKPVW--LFDVGFQLSFSAVAAIVLVQP---KLYALWKVDNRFLRYLWG 374
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ + + +I +F + L+ N+ IP++S V+ A + +L
Sbjct: 375 L---------MTVSVAAQLGTAPLVIFYFSRFSTHFLLTNLWVIPMVSLVLYSAVFLLML 425
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVT--IVVEFLLMVF 192
+ + ++ V+ + + + I + + + + F
Sbjct: 426 TPLPFVQHLFARVVEALVHVQNEVLRWIERLPGAAVDDIWLDIWGVLLVYLFLGMAYYGF 485
Query: 193 CKTNIRHIGSIMIGITIIILF 213
+ +R + ++ + ++ +
Sbjct: 486 LRLTVRRVCFALLALLAVVSW 506
>gi|319651625|ref|ZP_08005752.1| DNA internalization-like competence protein ComEC/Rec2 [Bacillus
sp. 2_A_57_CT2]
gi|317396692|gb|EFV77403.1| DNA internalization-like competence protein ComEC/Rec2 [Bacillus
sp. 2_A_57_CT2]
Length = 776
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 85/273 (31%), Gaps = 40/273 (14%)
Query: 1 MLSITKKYDPFPAETTIEGIAR--LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM 58
+L K P I + L + F +F+ I +
Sbjct: 296 VLLAKKLKAPIQLADVISIVFIGYLFISPYIIYNAGFQLSFAVALSLILS---------- 345
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
I + S + +A L+ HF+ + + +IAN++
Sbjct: 346 ------------APIILKRFSESYAAILAVSFVCQMAAIPILLWHFYEVSIISIIANLIF 393
Query: 119 IPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+P+ SF+++P LI + +L + V + + IA +S N + P
Sbjct: 394 VPLYSFIILPVVLILFIFDLLTEGKAVLLLNVFERLISFLNWIAELLSAIPNSTLVLGRP 453
Query: 177 ETSFVTIVVEFLLMVFCKTNIR--------HIGSIMIGITIIILFTFPYSFSPDLLISEK 228
+ IV L+ F R G + I +I + ++ + ++ +
Sbjct: 454 SL-IMLIVYLLLIPAFFAGWERSKNKKALIRSGVLPILAILIQYLSNVFTPAGEITFIDV 512
Query: 229 GN----LVALVDKNTLISNYSNPPS-FIFSQWK 256
G L+ L + F W+
Sbjct: 513 GQGDSILIKLPYGRGNYLIDAGGTLMFDTEDWR 545
>gi|254247797|ref|ZP_04941118.1| ComEC/Rec2-related protein [Burkholderia cenocepacia PC184]
gi|124872573|gb|EAY64289.1| ComEC/Rec2-related protein [Burkholderia cenocepacia PC184]
Length = 576
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 70/247 (28%), Gaps = 18/247 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ G L P G F + ++ I + + + +
Sbjct: 92 RSVPTSAVLCAALGGVLLVDPWAVLSAG-----FWLSFGAVAVILLAVAGWRAVREVDDI 146
Query: 64 ------SHNTWTWKKISSIKQSFLNEIR--ANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
T ++ + + + + F + + G N
Sbjct: 147 DEAGAEGGTTGLRSRLRGWGTRCRRRLAEATRVQYAVTIGLAPLTAAWFAQVSLSGPFGN 206
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
AIP +S VV P L I L LD F + L+ ++ + ++ R+
Sbjct: 207 AFAIPWVSSVVTPVVLAGIAL-PPPLDAAAFRLAHAALEPMMTLLGYLADWPAGVFWLRM 265
Query: 176 PETSFVTIV-VEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
P+ + + V + + +R + + P L + + G A
Sbjct: 266 PDWPVLALACVGVAWALMPRGWPLRWAAPLTWLPLVAPAPDAPPPGGFRLTVLDVGQGAA 325
Query: 234 LVDKNTL 240
++ +
Sbjct: 326 VLVETAR 332
>gi|241662663|ref|YP_002981023.1| DNA internalization-like competence protein ComEC/Rec2 [Ralstonia
pickettii 12D]
gi|240864690|gb|ACS62351.1| DNA internalization-related competence protein ComEC/Rec2
[Ralstonia pickettii 12D]
Length = 839
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 76/288 (26%), Gaps = 16/288 (5%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + P G F + ++ I + + +
Sbjct: 349 DRNVPASLSLCWAAAAVAVMDPWAVMSAG-----FWLSFGAVAIIFIAAQM-----ALDG 398
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
H + + + +++ R I + + F V AN LAIP +SF
Sbjct: 399 HRSENAGWVGATRRALAGGTR--IQFAVTFGLLPLTLLLFQQTSVVSAAANGLAIPAVSF 456
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V P LI L L + ++ ++ + V +
Sbjct: 457 VTTPLALIGAAL-PDPLAQPVLELAEASFRWLVVWLEWLATPRWSVWVAPAGPIWAVLLS 515
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+ + ++ +R G +++ P + LVA +
Sbjct: 516 MVAVALLLMPGGLRAWAWRAQGALLLLPLVLAREPLPS---PGEFRLVAFDIGQGAAALV 572
Query: 245 SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ A V L+ +L ++ S +
Sbjct: 573 ETANHRLLFDTGPRYGDHADAAARVIAPYLRAHGVEALDTLVVSHEDN 620
>gi|319896474|ref|YP_004134667.1| inner membrane protein [Haemophilus influenzae F3031]
gi|317431976|emb|CBY80324.1| conserved inner membrane protein [Haemophilus influenzae F3031]
Length = 788
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPIQLFTVVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLILWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + + G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWIFSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G+ +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWFNVSFNLALVLTA 462
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 463 LCAGIFMLIIWR 474
>gi|282879464|ref|ZP_06288200.1| ComEC/Rec2-like protein [Prevotella buccalis ATCC 35310]
gi|281298412|gb|EFA90845.1| ComEC/Rec2-like protein [Prevotella buccalis ATCC 35310]
Length = 514
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 14/196 (7%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + A + + L P L+D F + ++AI Y E
Sbjct: 323 LNRDKMSLNALSLTAIVMLLLHPL-----SLWDVGFQLSFMAVAAILLLY------RPIE 371
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S++ + + + + +F Y L+ N+LA+P+
Sbjct: 372 RWMPEAILVRSAVVGKLWGMM--AVSLAAQLGTAPLVAYYFGRFSCYFLLTNLLAVPLTV 429
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-RIPETSFVT 182
++ + L+ L L ++ + W ++ H ++ G I
Sbjct: 430 LILYTSCLLFALSFAPLLQSVVAVALTWMTQVLNHYLSLLANWPGASVEGIHINLWQLAL 489
Query: 183 IVVEFLLMVFCKTNIR 198
+ V + + + +R
Sbjct: 490 MYVIIACVCWVASYLR 505
>gi|147668675|ref|YP_001213493.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides sp. BAV1]
gi|146269623|gb|ABQ16615.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides sp. BAV1]
Length = 796
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 68/192 (35%), Gaps = 9/192 (4%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI-YSS 62
+ ++ + PA + PS L+ +F + + + Y + K +
Sbjct: 308 LGRQKNAMPALCLAAAVMVAFSPSI-----LWSVSFQLSFMSMLGLILVYPMLKELNIRL 362
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ L+ + ++ L+ +F I + G +A +LA+P +
Sbjct: 363 LDRLGLAEGIFRATLGLVLDGLAVSLAAIAGI--WPVLLYYFENISLIGPVATLLAMPAM 420
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAW-GLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
F+++ + L A+L ++ I G + W ++ + + G P +
Sbjct: 421 PFIIVLSFLTALLGLVFPAGAIFMGYLTWLPCRYMLVVVSLTASVPGVLMSGLRPGAMLM 480
Query: 182 TIVVEFLLMVFC 193
I L M++
Sbjct: 481 GIYYFLLGMLYW 492
>gi|282880794|ref|ZP_06289490.1| ComEC/Rec2-like protein [Prevotella timonensis CRIS 5C-B1]
gi|281305328|gb|EFA97392.1| ComEC/Rec2-like protein [Prevotella timonensis CRIS 5C-B1]
Length = 414
Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 59/200 (29%), Gaps = 18/200 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + A + + + P L+D +F + + AI Y +
Sbjct: 223 LNRHRMSLNALSFAAIVMLMIQPML-----LWDVSFQLSFMAVLAILILYHPIYHLLP-- 275
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ L + + + +F Y L N++A+P+ +
Sbjct: 276 ------LHWLQCSSFIRLLWGMMTVSVAAQIGTAPLVAYYFGRFSCYFLFTNLIAVPLTT 329
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-----IGRIPET 178
F++ A L+ +L NI VMAW + I+
Sbjct: 330 FILYTACLVFMLSFWTLAQNIVAKVMAWTAQCLNQQLSVIASWTGASVENIHLTAIQVLA 389
Query: 179 SFVTIVVEFLLMVFCKTNIR 198
++ I + + + R
Sbjct: 390 IYLLISCGIGFLFYLSKSYR 409
>gi|270295855|ref|ZP_06202055.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273259|gb|EFA19121.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 693
Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 69/201 (34%), Gaps = 17/201 (8%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
T+ A L P + LFD F + ++AI +Y+ + + +
Sbjct: 335 TLAATAFLMLLCKPVW--LFDVGFQLSFSAVAAIVLVQP---KLYALWKVDNRFLRYLWG 389
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ + + +I +F + L+ N+ IP++S V+ A + +L
Sbjct: 390 L---------MTVSVAAQLGTAPLVIFYFSRFSTHFLLTNLWVIPMVSLVLYSAVFLLML 440
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVT--IVVEFLLMVF 192
+ + ++ V+ + + + I + + + + F
Sbjct: 441 TPLPFVQHLFARVVEALVHVQNEVLRWIERLPGAAVDDIWLDIWGVLLVYLFLGMAYYGF 500
Query: 193 CKTNIRHIGSIMIGITIIILF 213
+ +R + ++ + ++ +
Sbjct: 501 LRLTVRRVCFALLALLAVVSW 521
>gi|78066886|ref|YP_369655.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. 383]
gi|77967631|gb|ABB09011.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. 383]
Length = 830
Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 70/248 (28%), Gaps = 19/248 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ G L+ P G F + + I + + +++
Sbjct: 345 RSVPASAVLCVALGGVLLADPWAVLSAG-----FWLSFGAVVVILLAVAGWRAAREADAE 399
Query: 66 NTWTWK-----------KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
+ + + + + + + F + + G
Sbjct: 400 SEEGEEGDGAAGLSSRLRAWGARAGRRIAEATRVQYAVTIGLAPLTAAWFAQVSLSGPFG 459
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
N AIP +S VV P L I L LD F + L+ ++ + ++ R
Sbjct: 460 NAFAIPWVSSVVTPVVLAGIAL-PAPLDAYAFRLAHAALEPMMTLLGHLADWPAGVFWLR 518
Query: 175 IPETS-FVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P+ V V + + +R + + P L + + G
Sbjct: 519 MPDWPTLVLACVGVAWALMPRGWPLRWAAPLTWLPLVAPAADAPPPGGFRLTVLDVGQGA 578
Query: 233 ALVDKNTL 240
+++ +
Sbjct: 579 SVLVETAR 586
>gi|213962126|ref|ZP_03390390.1| competence protein [Capnocytophaga sputigena Capno]
gi|213955132|gb|EEB66450.1| competence protein [Capnocytophaga sputigena Capno]
Length = 636
Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F Y + +I FY + + W K I+ +G
Sbjct: 351 LYDVGFQLSYAAVFSIMKFYPVMRK---------WWLPKNKYIR---WIWSLFLVGLSAQ 398
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG---VMA 150
+ +FH P+ +AN++ +P+L ++I G+IA+ L LD +P+ V+
Sbjct: 399 IVVLPISLYYFHQFPILFFVANLVVVPLLQPILI-GGIIALCLG--GLDILPYPIIFVLE 455
Query: 151 WGLDIIIHIAHRISVAH 167
+ ++ + I+
Sbjct: 456 KLITLMNILVAFIAHQE 472
>gi|261856026|ref|YP_003263309.1| DNA internalization-related competence protein ComEC/Rec2
[Halothiobacillus neapolitanus c2]
gi|261836495|gb|ACX96262.1| DNA internalization-related competence protein ComEC/Rec2
[Halothiobacillus neapolitanus c2]
Length = 840
Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 29/269 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + + L P G F + + + + +
Sbjct: 382 LLLGRSWRLLDLWLIALVGVLLLDPFNALTAG-----FWLSFGAVLIMLLWLQYRPALAF 436
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + F + L ANILA+P+
Sbjct: 437 WRDGFR--------------------LQIIITLALLPIVWWLFDRVAWSSLPANILAVPV 476
Query: 122 LSFVVIPAGLI--AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
++FV+ P L+ A + M+ S+ + + + + + + I +
Sbjct: 477 ITFVITPLSLLVMAFVSMLPSVAAVLMWPINVLTHGLFGFLEWLRLTLPDSHIAAPAGWT 536
Query: 180 FVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
+ + M+ K R++G ++ + D+ + G +A+V
Sbjct: 537 LLLASLGVAWMLMPKFWPARYLGLVLCLPAVFYRPAPIPDGEADIWFLDVGQGLAVVIHT 596
Query: 239 TL-ISNYSNPPSFIFSQWKSALITPFHEA 266
Y P+F S + P A
Sbjct: 597 ARHAMLYDAGPAFGGSDAGERTVVPALRA 625
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 72/229 (31%), Gaps = 13/229 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
RL PP G A PG FD+ + + I+A G + P ++ +
Sbjct: 198 GAVWRFDLRLKPPHGSANPGGFDYERWLFSQRIAATGSVHGKPTLLAERGDGFAAYLLSV 257
Query: 74 SSIKQSFLNEIRANIGT-----YGSASASIFLIKHFHCIPVYGLIA----NILAIPILSF 124
S ++ L I + GT +I + L+A ++LAI L
Sbjct: 258 RSHWRAQLLAISQSQGTPDRGRGLLLGLTIGDSDYLGQNDWETLLATGTNHLLAISGLHV 317
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
++ + + S + + + F G T ++
Sbjct: 318 GMVSGLFAWLAAWLWSRTR---WCEGFPARRVAAGVAVFAAWGYAFLAGMSVPTERTALM 374
Query: 185 VEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+ LL R + +I + ++L + + +S L+
Sbjct: 375 ITILLAGLLLGRSWRLLDLWLIALVGVLLLDPFNALTAGFWLSFGAVLI 423
>gi|289431977|ref|YP_003461850.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides sp. GT]
gi|288945697|gb|ADC73394.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides sp. GT]
Length = 796
Score = 70.2 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 68/192 (35%), Gaps = 9/192 (4%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI-YSS 62
+ ++ + PA + PS L+ +F + + + Y + K +
Sbjct: 308 LGRQKNAMPALCLAAAVMVAFSPSI-----LWSVSFQLSFMSMLGLILVYPMLKELNIRL 362
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ L+ + ++ L+ +F I + G +A +LA+P +
Sbjct: 363 LDRLGLAEGIFRATLGLVLDGLAVSLAAIAGI--WPVLLYYFENISLIGPVATLLAMPAM 420
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAW-GLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
F+++ + L A+L ++ I G + W ++ + + G P +
Sbjct: 421 PFIIVLSFLTALLGLVFPAGAIFMGYLTWLPCRYMLVVVSLTASVPGVLMSGLRPGAMLM 480
Query: 182 TIVVEFLLMVFC 193
I L M++
Sbjct: 481 GIYYFLLGMLYW 492
>gi|53715185|ref|YP_101177.1| competence protein [Bacteroides fragilis YCH46]
gi|52218050|dbj|BAD50643.1| competence protein [Bacteroides fragilis YCH46]
Length = 699
Score = 70.2 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 17/188 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI Y + + ++
Sbjct: 357 LFDVGFQLSFSAVAAILLLYPWLFR------QLPVGNSLLKKVW------ALMSVSLAAQ 404
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F P + L+ N+L IP++S + + A + ++L + F V+ L
Sbjct: 405 IGTAPLVLLYFSRFPTHFLLTNLLVIPLVSGI-MYATVALLVLTPFPMLYTGFSVVVRSL 463
Query: 154 -DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D + + + + T F L++ + + S+ I
Sbjct: 464 VDWLNTMVRWVEHLPLASIDR---VWIYPTEAFAFYLVLLIGIRYKVVRSLKCLYVFGIC 520
Query: 213 FTFPYSFS 220
SF
Sbjct: 521 ILAMGSFH 528
Score = 44.8 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 17/214 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + +A +SPPS P FD+ YKGIS I + S I +
Sbjct: 150 LRSGDELIFLAHVSPPSNNGNPDEFDYARYLRYKGISGIAFVASGNWKITGYRFSRSCRQ 209
Query: 71 KKISSIKQSFLNEIRAN-IGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPIL 122
+ ++ L++ RA + A + + + + +++LA+ L
Sbjct: 210 IALEY-RERILDQYRALKFNSDEFAVLAALTVGYKEELSEDIRETYSVSGASHVLALSGL 268
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
G + ++L+ L +P +G+ + + ++ F G P
Sbjct: 269 HI-----GFLYMMLL-FFLKWLPGNA--FGVRLFRAVVIITALWGFAFFTGLSPSVVRSV 320
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
I+ L + + + I+L P
Sbjct: 321 IMFSLLALSVLSRRTGISLNTLALTACIMLVVHP 354
>gi|145630640|ref|ZP_01786419.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
gi|144983766|gb|EDJ91216.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
Length = 788
Score = 70.2 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y PF T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPFQLFTLVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLILWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + L+ +G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWILSLFHLQLGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G+ +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWFNVSFNLALVLTA 462
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 463 LCAGIFMLIIWR 474
>gi|221314806|ref|ZP_03596611.1| putative integral membrane protein [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221324006|ref|ZP_03605300.1| putative integral membrane protein [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 767
Score = 69.8 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 72/239 (30%), Gaps = 25/239 (10%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ I L F F +F+ +
Sbjct: 300 CLSYIVLLLFNPYHLFEAGFQLSFA---------------------VSFSLILSSSIFQQ 338
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+K S + + L+ HFH + + N+L +P +F ++P + +L
Sbjct: 339 VKTSLGQ--LTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGAVAGVL 396
Query: 136 LMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L+ L S + F + I + I+ + P + + ++++
Sbjct: 397 LLSLSASFGRLFFSWFDLLISWINRLITNIADVDVFTIMIAHPAPVLLFLFTVTIILLLM 456
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF 252
R + +M+ I F P L + +++ + +++ + +
Sbjct: 457 AIEKRSLSQLMVTGGICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVL 515
>gi|330826316|ref|YP_004389619.1| DNA internalization-related competence protein ComEC/Rec2
[Alicycliphilus denitrificans K601]
gi|329311688|gb|AEB86103.1| DNA internalization-related competence protein ComEC/Rec2
[Alicycliphilus denitrificans K601]
Length = 796
Score = 69.8 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 83/246 (33%), Gaps = 28/246 (11%)
Query: 1 MLSITKKYDPFPAETTIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L ++ + P+P + L+ P PG F + ++ +
Sbjct: 333 LLRLSGRRWPWPQVWLLACAVVLAADPWALLQPG-----FWLSFVAVAVLFA-------- 379
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ + + FL +R + + L+ F + + GL+AN+LAI
Sbjct: 380 ----TDMGAAGARPTGAAGRFLGLLREQWVVTLALTPLTLLL--FGQVSIVGLLANLLAI 433
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
P + VV P L+ +L L + AW + + + ++ +
Sbjct: 434 PWTTLVVTPLALLGVLWAPL------WQAAAWCVQWLTVLLQWLAAWPWAQVSLPMAPQW 487
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS--PDLLISEKGNLVALVDK 237
+ V +++ + + + + + P +LL ++ G A++ +
Sbjct: 488 AGALAVAGGVLLALRLPWGVRALGLPLLLPALWWQPPRPAPGQFELLAADVGQGQAVLVR 547
Query: 238 NTLISN 243
+
Sbjct: 548 TARHAL 553
>gi|114567114|ref|YP_754268.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338049|gb|ABI68897.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 761
Score = 69.8 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 23/181 (12%)
Query: 5 TKKYDPFPAETTIEG-IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + + + G I +S P LF +F + + Y + + K
Sbjct: 298 SGRENALLNGLGLAGTIIIVSDPFA-----LFKISFQLSFVATWGLLYLFPLMKK----- 347
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + I + HF+ L++N+L +
Sbjct: 348 -----RLQYTNRLWD------LLLIPLSAQLAVLPLTAYHFNLFSPVSLLSNVLTSYLSG 396
Query: 124 FVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
VI L +L I L I + +++I+ + + F P +
Sbjct: 397 ACVILGLLALMLATIWPWLAGIFLFPAGFFIELIMGLNSAVLKLPLAFWWVATPHFILII 456
Query: 183 I 183
+
Sbjct: 457 V 457
>gi|319761824|ref|YP_004125761.1| DNA internalization-related competence protein comec/rec2
[Alicycliphilus denitrificans BC]
gi|317116385|gb|ADU98873.1| DNA internalization-related competence protein ComEC/Rec2
[Alicycliphilus denitrificans BC]
Length = 799
Score = 69.8 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 83/246 (33%), Gaps = 28/246 (11%)
Query: 1 MLSITKKYDPFPAETTIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L ++ + P+P + L+ P PG F + ++ +
Sbjct: 336 LLRLSGRRWPWPQVWLLACAVVLAADPWALLQPG-----FWLSFVAVAVLFA-------- 382
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ + + FL +R + + L+ F + + GL+AN+LAI
Sbjct: 383 ----TDMGAAGARPTGAAGRFLGLLREQWVVTLALTPLTLLL--FGQVSIVGLLANLLAI 436
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
P + VV P L+ +L L + AW + + + ++ +
Sbjct: 437 PWTTLVVTPLALLGVLWAPL------WQAAAWCVQWLTVLLQWLAAWPWAQVSLPMAPQW 490
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS--PDLLISEKGNLVALVDK 237
+ V +++ + + + + + P +LL ++ G A++ +
Sbjct: 491 AGALAVAGGVLLALRLPWGVRALGLPLLLPALWWQPPRPAPGQFELLAADVGQGQAVLVR 550
Query: 238 NTLISN 243
+
Sbjct: 551 TARHAL 556
>gi|75763392|ref|ZP_00743125.1| COME operon protein 3 [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74489121|gb|EAO52604.1| COME operon protein 3 [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 748
Score = 69.8 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 41/220 (18%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ + P +I G+ RLS + + F+ F
Sbjct: 245 LYMVLAGASPSVIRASIAGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPYLVFNIGFQF 304
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ SS I+ S I + + ++ L+
Sbjct: 305 SF--VGSFALLLSAPFLLGSSNG----------VIRNSIYISIISQL------VSTPILL 346
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHI 159
HF Y + N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 347 YHFGYFSPYSIFLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFANVLSIGLSMSNDF 406
Query: 160 AHRISVAHNEFCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
+ + V + + +++ +
Sbjct: 407 LSYCESLPFTQLVFGKTPFNLVAVYCASIVSILMVWERRA 446
>gi|167765260|ref|ZP_02437373.1| hypothetical protein BACSTE_03648 [Bacteroides stercoris ATCC
43183]
gi|167696888|gb|EDS13467.1| hypothetical protein BACSTE_03648 [Bacteroides stercoris ATCC
43183]
Length = 684
Score = 69.8 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 15/181 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI +Y S +K + +
Sbjct: 342 LFDVGFQLSFSAVAAIVLLQPG---LYGLLSVKNRLLRKAWGLV---------TVSVAAQ 389
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
+ ++ +F + L+ N+L IP++S +V A +I ++L L + V+
Sbjct: 390 IGTAPLVMLYFSRFSTHFLLTNLLVIPLVSLIVY-AAVILLVLTPFPVLQQLFADVVEIP 448
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
L + + I I RI + + L++FC+ +R + + +L
Sbjct: 449 LRMQNALLRWIEQLPLA-SIDRIWVDIWDVFLFYCCLLLFCRVWMRRTAANVYIALSALL 507
Query: 213 F 213
Sbjct: 508 L 508
>gi|163751458|ref|ZP_02158682.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella benthica KT99]
gi|161328672|gb|EDP99821.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella benthica KT99]
Length = 762
Score = 69.8 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/267 (13%), Positives = 82/267 (30%), Gaps = 36/267 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP-KMIYSSE 63
+ P+ L P G F + + I S + + E
Sbjct: 292 KRFSSPWERLLYALFFILLFDPLACMSAG-----FWLSFSALGIIFLSLSQWTRRESAQE 346
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + + + R ++G + F + YGL+ N++ +P S
Sbjct: 347 ADTGPLLNVKNKLAMFWSVQWRLSLGLGLIQALL------FGGVSAYGLLFNLVLVPWFS 400
Query: 124 FVVIPAGLIAILLM------------ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
VVIP + L+ I +L ++ M+ G +I +
Sbjct: 401 LVVIPVSFLCFLIWAGGHVFFMELTQIFTLVDLSLMPMSLGFGLI-------ESLPGAWI 453
Query: 172 IGRIPETS-FVTIVVEFLLMVFCKTNIRHIGSIMIGITII----ILFTFPYSFSPDLLIS 226
+ + ++ L+ + R + + ++ L T P L+
Sbjct: 454 SVSGQTIACLIFFMLGLLMFRVSQQRWRLVSISLCMPLVLSVLFGLVTPPQDEWRLHLLD 513
Query: 227 EKGNLVALVDKNTLISNYSNPPSFIFS 253
L A+++K+ Y ++ +
Sbjct: 514 VGQGLSAVIEKSGKALIYDTGAAYGTN 540
>gi|16079611|ref|NP_390435.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
subtilis str. 168]
gi|221310482|ref|ZP_03592329.1| putative integral membrane protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221319728|ref|ZP_03601022.1| putative integral membrane protein [Bacillus subtilis subsp.
subtilis str. JH642]
gi|33518612|sp|P39695|COMEC_BACSU RecName: Full=ComE operon protein 3
gi|1303798|dbj|BAA12454.1| ComEC [Bacillus subtilis]
gi|2635003|emb|CAB14499.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
subtilis str. 168]
Length = 776
Score = 69.8 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 72/239 (30%), Gaps = 25/239 (10%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ I L F F +F+ +
Sbjct: 309 CLSYIVLLLFNPYHLFEAGFQLSFA---------------------VSFSLILSSSIFQQ 347
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+K S + + L+ HFH + + N+L +P +F ++P + +L
Sbjct: 348 VKTSLGQ--LTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGAVAGVL 405
Query: 136 LMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L+ L S + F + I + I+ + P + + ++++
Sbjct: 406 LLSLSASFGRLFFSWFDLLISWINRLITNIADVDVFTIMIAHPAPVLLFLFTVTIILLLM 465
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF 252
R + +M+ I F P L + +++ + +++ + +
Sbjct: 466 AIEKRSLSQLMVTGGICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVL 524
>gi|305675212|ref|YP_003866884.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
spizizenii str. W23]
gi|305413456|gb|ADM38575.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 771
Score = 69.8 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 72/243 (29%), Gaps = 33/243 (13%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ I L F F +F+ +
Sbjct: 304 CLSYIVLLLFNPYYLFEAGFQLSFA---------------------VSFSLILSSSIFKR 342
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+K A + + L+ HF + + N++ +P +F V+P + +
Sbjct: 343 VKTFLGQ--LAMVSMIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCVLPGAIAGVF 400
Query: 136 LMILSLDN------IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
L+ LS+ +M+W +I IA I P + + + + ++
Sbjct: 401 LLSLSVSAGRLFFGWFDFLMSWANKLITKIAE----IDVFTIIIARPAPALLFLFIATII 456
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
++ R +M+ + P L + +++ + +++ +
Sbjct: 457 LLLMAIEKRSFSQLMVTGGMCCAVLSLLFIYPRLSSEGEVDMIDIGQGDSMYVGAPHQRG 516
Query: 250 FIF 252
+
Sbjct: 517 HVL 519
>gi|145639650|ref|ZP_01795253.1| DNA mismatch repair protein [Haemophilus influenzae PittII]
gi|145271207|gb|EDK11121.1| DNA mismatch repair protein [Haemophilus influenzae PittII]
gi|309750620|gb|ADO80604.1| Recombination protein Rec2 [Haemophilus influenzae R2866]
Length = 788
Score = 69.8 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPLQLFTLVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLLLWYR-----YMPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + + G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWIFSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G+ +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWFNVSFNLALVLTA 462
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 463 LCAGIFMLIIWR 474
>gi|91776445|ref|YP_546201.1| DNA internalization-related competence protein ComEC/Rec2
[Methylobacillus flagellatus KT]
gi|91710432|gb|ABE50360.1| DNA internalization-related competence protein ComEC/Rec2
[Methylobacillus flagellatus KT]
Length = 802
Score = 69.4 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 76/221 (34%), Gaps = 26/221 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + ++ + Y + ++ + L + IG
Sbjct: 363 VGFWLSFGAVAVMAYALGG-------------RLQHPHWLRDAILTQWAVTIGLMPVLLM 409
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
F + + +AN AIP++S V++P L+ L LD++ + W + +
Sbjct: 410 L------FGQVSLISPLANAFAIPLVSLVIVPLTLLGSFL---PLDSL-LWLAHWLMQLA 459
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT--NIRHIGSIMIGITIIILFT 214
+ + +S + + IP + + + + + + +R +G + + +
Sbjct: 460 MALLLWLSESPSAIWQQHIPSIPAMLLALAGVACLLLPSGVPLRWLGLAGMLPLFLDAPS 519
Query: 215 FPYSFSPDLLISEKGNLVA-LVDKNTLISNYSNPPSFIFSQ 254
P + + + G +A +V+ + Y P F
Sbjct: 520 MPARGDMRVAVLDVGQGLAVVVNTQNHVLLYDTGPRFSSES 560
Score = 36.3 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 82/261 (31%), Gaps = 14/261 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
F A + RL P + P +DF + I A GY P + ++
Sbjct: 147 FHAGERWQFTVRLKRPHSTSNPYGYDFELWMLERNIRASGYIRQSPAAVRV-DARVNRPA 205
Query: 71 KKISSIKQSFLNEIRANIGTYGSASAS---------IFLIKHFHCIPVYGLIANILAIPI 121
+ +++S I + + A + + G+I ++++I
Sbjct: 206 YWVDMVRESVSRRIESVLQDRPYAGVLKALAIGEDDAVSQQDWQVFRRTGII-HLISISG 264
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
L ++ + ++ I +P + +A ++ G T
Sbjct: 265 LHITMLSGMVYTLVFAIW--RRVPHWTLRCPARKAGLVAGVVTAVAYSLVAGFSIPTQRT 322
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-LLISEKGNLVALVDKNTL 240
++ + + F IG +++ ++++ P++ +S V
Sbjct: 323 LYMLSVIALAFWSGRRVSIGRVLLLSLLVVVLIDPWAVLAVGFWLSFGAVAVMAYALGGR 382
Query: 241 ISNYSNPPSFIFSQWKSALIT 261
+ + I +QW +
Sbjct: 383 LQHPHWLRDAILTQWAVTIGL 403
>gi|206560545|ref|YP_002231310.1| metallo-beta-lactamase superfamily membrane protein [Burkholderia
cenocepacia J2315]
gi|198036587|emb|CAR52484.1| metallo-beta-lactamase superfamily membrane protein [Burkholderia
cenocepacia J2315]
Length = 835
Score = 69.4 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 73/244 (29%), Gaps = 15/244 (6%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ G L+ P G F + ++ I + + + ++
Sbjct: 354 RSVPTSAVLCAALGGVLLADPWAVLSAG-----FWLSFGAVAVILLAVAGWRAVREADEA 408
Query: 64 ---SHNTWTWKKISSIKQSFLNEIR--ANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
++ + + + + + F + + G N A
Sbjct: 409 GMEGGAADWRSRLRAWTTRCGRRLADATRVQYAVTIGLAPLTAAWFAQVSLSGPFGNAFA 468
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
IP +S VV P L I L LD F + L+ ++ + ++ R+P+
Sbjct: 469 IPWVSSVVTPVVLAGIAL-PPPLDAAAFRLAHAALEPMMTLLGHLADWPAGVFWLRMPDW 527
Query: 179 SFVTIV-VEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
+ + V ++ + +R + + P + + + G A++
Sbjct: 528 PVLALACVGVAWVLMPRGWPLRWAAPLTWLPLVAPAPDAPPPGGFRMTVLDVGQGAAVLV 587
Query: 237 KNTL 240
+
Sbjct: 588 ETAR 591
>gi|255536110|ref|YP_003096481.1| Competence protein [Flavobacteriaceae bacterium 3519-10]
gi|255342306|gb|ACU08419.1| Competence protein [Flavobacteriaceae bacterium 3519-10]
Length = 592
Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 74/194 (38%), Gaps = 20/194 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + +K D A I ++ +D F + + I ++ + P + Y
Sbjct: 306 ILLQRKPDLLHAMAVAAFIILIADTHQ-----FYDVGFQLSFLAVFGI-FWLNQPILNYL 359
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
N + ++ + S +I ++ +FH ++AN++ IP
Sbjct: 360 PRPKNNFQNFLVNVVSVSVAAQIV----------TLPLVLFYFHQYSFISILANLIVIPF 409
Query: 122 LSFVVIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++I L+ +L SL+ + + + + + H +VA F R+ S
Sbjct: 410 SEVLII-FSLLMTVLTAFSLEFKLLNLIYDSFVSAALEMIHLFAVAGFAFY--RMIPMSM 466
Query: 181 VTIVVEFLLMVFCK 194
++V F+++ F +
Sbjct: 467 PEVLVSFVMIYFLR 480
>gi|228902851|ref|ZP_04066994.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis IBL 4222]
gi|228856775|gb|EEN01292.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis IBL 4222]
Length = 659
Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 41/220 (18%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ + P +I G+ RLS + + F+ F
Sbjct: 156 LYMVLAGASPSVIRASIAGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPYLVFNIGFQF 215
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ SS I+ S I + + ++ L+
Sbjct: 216 SF--VGSFALLLSAPFLLGSSNG----------VIRNSIYISIISQL------VSTPILL 257
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHI 159
HF Y + N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 258 YHFGYFSPYSIFLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFANVLSIGLSMSNDF 317
Query: 160 AHRISVAHNEFCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
+ + V + + +++ +
Sbjct: 318 LSYCESLPFTQLVFGKTPFNLVAVYCASIVSILMVWERRA 357
>gi|330817646|ref|YP_004361351.1| DNA internalization-related competence protein ComEC/Rec
[Burkholderia gladioli BSR3]
gi|327370039|gb|AEA61395.1| DNA internalization-related competence protein ComEC/Rec
[Burkholderia gladioli BSR3]
Length = 830
Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 71/259 (27%), Gaps = 22/259 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS--- 62
+ P G L+ P PG F + ++ I + S
Sbjct: 342 RSIAPSTTLAAALGCVLLADPWAVLMPG-----FWLSFGAVAVILFAVSGRAARPWPADE 396
Query: 63 ---------ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLI 113
+ T + ++ + + A + + + F + F +P+ G +
Sbjct: 397 PAVVEAGGLDPGGTRQRLRRAAARLVRIGANGARVQYAVTLGLAPFTVVWFGQVPLAGAL 456
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
AN AIP + +V P L + L LD + L + + +
Sbjct: 457 ANAFAIPWVGSLVTPIVLAGMAL-PAPLDVLVLRAAHALLTAMFALFEAMPAGLAAVAEM 515
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL----FTFPYSFSPDLLISEKG 229
P + + + + ++L + LL +G
Sbjct: 516 PSPSWFALLAALAGTGWALMPRGWPLRFAAPLAWLPLVLPPSQAPPAGALRLTLLDVGQG 575
Query: 230 NLVALVDKNTLISNYSNPP 248
V + + + P
Sbjct: 576 LAVLAETAHHRLLFDAGPG 594
>gi|295676926|ref|YP_003605450.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. CCGE1002]
gi|295436769|gb|ADG15939.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. CCGE1002]
Length = 877
Score = 69.4 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 82/266 (30%), Gaps = 29/266 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS--- 62
++ G+ L P G F + + AI + S +
Sbjct: 363 RQLARSTVLAWALGLVLLVDPWAVVSAG-----FWLSFCAVGAILFAMSGRPRVRGPQTS 417
Query: 63 ----ESHNTWTWKKISSIKQSFLNEIRAN---------IGTYGSASASIFLIKHFHCIPV 109
+ + +++ + +RA + + + + F IP+
Sbjct: 418 RQHEDGEGGAAQHRWLALRPVLIRHLRALAERLRSAAHVQIAVTVALAPLTANWFAQIPL 477
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN- 168
G +AN AIP +S +V PA L + L LD + LD + +S
Sbjct: 478 VGPLANAFAIPWVSALVTPAVLAGVAL-PAPLDAFAWRAAHTLLDGLAAGLQLVSGPRWT 536
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI-----MIGITIIILFTFPYSFSPD 222
+ + + + V L + + +R + ++ L +F
Sbjct: 537 LWWLPQPHAWALAAAAVGVLWCLAPRGWPLRWAAPLTWLPMLMPSANGALAEPSGAFRLT 596
Query: 223 LLISEKGNLVALVDKNTLISNYSNPP 248
L +G+ V + + + + P
Sbjct: 597 ALDVGQGSSVLVQTAHHALLFDAGPG 622
>gi|302038043|ref|YP_003798365.1| putative competence protein ComEC/Rec2 related protein [Candidatus
Nitrospira defluvii]
gi|300606107|emb|CBK42440.1| putative Competence protein ComEC/Rec2 related protein [Candidatus
Nitrospira defluvii]
Length = 843
Score = 69.4 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/194 (13%), Positives = 68/194 (35%), Gaps = 10/194 (5%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD +F Y + A+ S + ++ + + + + +
Sbjct: 353 ALFDISFQLSYVSVWALALALSR-----ETPVDELPLPQESPAGRMVYWFHESLRLTSLV 407
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN--IPFGVMA 150
+ + + +F+ + G+ AN+L +P + FV +P L++ + ++ + + +
Sbjct: 408 TLATVPLVACYFNQVSWMGVFANLLMVPFVGFVFLPISLLSAVWVMATHSSTLPGAAFID 467
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV--VEFLLMVFCKTNIR-HIGSIMIGI 207
+I H ++ P + + + + L+ + + M
Sbjct: 468 SLGQGLIASTHVLAGLPGAEWFVAAPTIPMMLLFYLLGWALLAGWPAHAAPLLRRSMASG 527
Query: 208 TIIILFTFPYSFSP 221
IL + +S P
Sbjct: 528 LACILLWWLWSPRP 541
>gi|294651088|ref|ZP_06728425.1| competence protein comA [Acinetobacter haemolyticus ATCC 19194]
gi|292823037|gb|EFF81903.1| competence protein comA [Acinetobacter haemolyticus ATCC 19194]
Length = 761
Score = 69.4 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 73/250 (29%), Gaps = 17/250 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + F + + P F Y + Y +
Sbjct: 290 MCLRQSIQAFSVLVYSASLLLVLDPFSILS-----AAFWLSYGACFILIRIYQTIIQLPQ 344
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
K + + I + ++ F + + + N++AIP+
Sbjct: 345 -------NVNLTFKQKMIWGSHILIESQWKIFVALLPLVLIFFQQVSWFAPLTNLIAIPL 397
Query: 122 LSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
L ++P ++A + ++ +L F + L ++ I + +
Sbjct: 398 LGACIVPLDILAACVWLIIPTLGQWLFQMNDVFLSFLMLILDVLQSISPQLYGISFTPWM 457
Query: 180 FVTIVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
V++++ L+ + + + ++ I+ + +L +G V +
Sbjct: 458 MVSLIIGIFLLFLPRGIVPKFWAAVCFLP--ILWGVKAQPEALHVLDVGQGQAVLVQHTK 515
Query: 239 TLISNYSNPP 248
+ +
Sbjct: 516 GNLLIDTGGS 525
>gi|258591115|emb|CBE67410.1| putative Metallo-beta-lactamase superfamily [NC10 bacterium 'Dutch
sediment']
Length = 834
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/227 (12%), Positives = 69/227 (30%), Gaps = 24/227 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + AI + + S+ W W + +
Sbjct: 378 LFDVGFQLTFVATGAIVVAVN---RLPSASLPVPWRWAVTPLV-----------LSIAAF 423
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
+ L+ FH + + G++AN+ +P+ + L A+L ++ ++ W
Sbjct: 424 LGTAPILVSTFHRLSLIGILANLPIVPLSGLLTGAGMLFAVLATVVPHFLGWFTVLIGWL 483
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVT---IVVEFLLMVFCKTNIRHIGSIMIGITI 209
+D+++ + + P V + + + + +R+ +
Sbjct: 484 IDLLVGLVGWFARLPCASVQLFSPSIPMVICYYVTLGTAIAAMGRRWLRYTALAAAAACV 543
Query: 210 IILFTFPYSF------SPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+++ +L +G+ + L F
Sbjct: 544 VLIGVRLLPIFQNGPLRMTVLDVGQGDAIVLELPGKRTILIDGGGLF 590
>gi|71280108|ref|YP_268850.1| DNA internalization-related competence protein ComEC/Rec2
[Colwellia psychrerythraea 34H]
gi|71145848|gb|AAZ26321.1| DNA internalization-related competence protein ComEC/Rec2
[Colwellia psychrerythraea 34H]
Length = 860
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/215 (14%), Positives = 64/215 (29%), Gaps = 27/215 (12%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
K+ I + P +F ++ I K
Sbjct: 349 KFSAKRLILVTIFILLIITPFSLLT-----ASFWLSVYAVAIIFVSLWRFK--------- 394
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W K + I I + F I + L ANI+A+P +S
Sbjct: 395 AWMNKGPYLWRFFKTLFI---IQVALTVMLMPITALFFQKISLVSLFANIIAVPWMSAFS 451
Query: 127 IPAGLIAILLMILSLDNIPFGVMA---WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
IP L++++L+ +S +++ M L + +S N + V +
Sbjct: 452 IPTALMSVVLIPIS-ESLAQWFMMLSLQSLTWLWFYLDLLSELPNAIISLSFVQQMIVLL 510
Query: 184 ----VVEFLLM--VFCKTNIRHIGSIMIGITIIIL 212
L + + I +++ ++ I+
Sbjct: 511 VGNAAFSILYLSPCLWTRGGKQITFVLLALSAIVF 545
>gi|218233672|ref|YP_002369135.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus B4264]
gi|218161629|gb|ACK61621.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus B4264]
Length = 773
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 270 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLGSSNRVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-N 168
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 382 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 441
Query: 169 EFCIGRIPETSFVTIVVEFL-LMVFCKTNI 197
+ G P + +++ +
Sbjct: 442 QLIFGETPLNLVAVYCASIVSILMVWERRA 471
>gi|187928056|ref|YP_001898543.1| DNA internalization-related competence protein ComEC/Rec2
[Ralstonia pickettii 12J]
gi|187724946|gb|ACD26111.1| DNA internalization-related competence protein ComEC/Rec2
[Ralstonia pickettii 12J]
Length = 840
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 72/268 (26%), Gaps = 15/268 (5%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P G F + ++ I + + S++ + W + ++
Sbjct: 369 DPWAVMSAG-----FWLSFGAVAIIFIAAQMALDGHRSDNPDGWVERTRRALAGG----- 418
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
I + + F V AN LAIP +SF+ P LI L L
Sbjct: 419 -TRIQFAVTFGLLPLTLLLFQQTSVVSAAANGLAIPAVSFMTTPLALIGAAL-PDPLAQP 476
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ ++ ++ + + V + + + ++ +R
Sbjct: 477 VLMLAEASFRWLVVWLEWLAKPRWSVWVAPVGPMWAVLLSMVAVALLLVPGGLRAWVWRA 536
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
G +++ P + LVA + +
Sbjct: 537 QGALLLLPLVLAREPLPS---PGEFRLVAFDIGQGAAALVETANHRLLFDTGPRYGDHAD 593
Query: 265 EAPHVQKEDLQEKNQSSLKEILRSMQPR 292
A V L+ +L + S +
Sbjct: 594 AAARVIAPYLRAHGVEALDTLAVSHEDN 621
>gi|309972805|gb|ADO96006.1| Recombination protein Rec2 [Haemophilus influenzae R2846]
Length = 788
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPIQLFTVVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLILWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + L+ G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWILSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGSTGLISV------FQGNWFNVSFNLALVLTA 462
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 463 LCAGIFMLIIWR 474
>gi|301168654|emb|CBW28245.1| conserved inner membrane protein [Haemophilus influenzae 10810]
Length = 788
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 60/191 (31%), Gaps = 19/191 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPIQLFTLVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLILWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + + G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWIFSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G+ +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWFNVSFNLALVLTA 462
Query: 183 IVVEFLLMVFC 193
+ +++
Sbjct: 463 LCAGIFMLIIW 473
>gi|297569040|ref|YP_003690384.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfurivibrio alkaliphilus AHT2]
gi|296924955|gb|ADH85765.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfurivibrio alkaliphilus AHT2]
Length = 854
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/181 (13%), Positives = 54/181 (29%), Gaps = 20/181 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ I P P LF +F + + I +
Sbjct: 372 RQWCSLNNLALAGLIILALDP-----PALFGASFQLSFAATAGII--------MLVPSLQ 418
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + F + + + + HFH + + + +LA P++ F
Sbjct: 419 DRYREATTPGRRLLFWVITSLLVSAVATLVTAPLAMHHFHRVSLLSPLTTLLATPLIFFW 478
Query: 126 VIPAGLIAILLMILSLDNIPFGVMA-------WGLDIIIHIAHRISVAHNEFCIGRIPET 178
+P LI + L + + GLD+ + + ++ F P
Sbjct: 479 TLPLALIGLALSTFGQAGVLGWLAGILLTAASRGLDLTVTMTVWLAELPGSFFYFAPPSV 538
Query: 179 S 179
+
Sbjct: 539 A 539
>gi|229846981|ref|ZP_04467087.1| recombination protein 2 [Haemophilus influenzae 7P49H1]
gi|229810065|gb|EEP45785.1| recombination protein 2 [Haemophilus influenzae 7P49H1]
Length = 788
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPIQLFTVVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLILWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + L+ G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWILSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGSTGLISV------FQGNWFNVSFNLALVLTA 462
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 463 LCAGIFMLIIWR 474
>gi|229163270|ref|ZP_04291225.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus R309803]
gi|228620333|gb|EEK77204.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus R309803]
Length = 693
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 92/283 (32%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKG----------ISAIG 50
+ I P +I G+ L FD + + IG
Sbjct: 190 LYMILAGASPSVIRASITGVLLLIAFMCSIRISSFD---ALSVTAICMLIYDPYLVFNIG 246
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
+ +S S I+ S I + + ++ L+ HF Y
Sbjct: 247 FQFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPY 300
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
++ N+L +P LS +V+P +I ++ M + L V++ GL I
Sbjct: 301 SILLNLLYVPFLSIIVLPCSIIILICMPIVPFLAKGLANVLSMGLSISNDFLSYCESFP- 359
Query: 169 EFCIGRIPETSFVTIVVEFL----LMVFCKTNI--RHIGSIMIGITIIILFTFPYS---- 218
F +TS + + V F+ +++ + + R + ++ G + + Y
Sbjct: 360 -FTRLVFGQTSILLVAVYFVIIVSILIVWERGMSKRVVSIVVGGFLFVCTCHYAYPYFRE 418
Query: 219 FSPDLLIS-EKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
I +G+ + + DK + + +W+
Sbjct: 419 SGSVTFIDVGQGDAILIRLPYDKGVYLIDTGGTLQLNKEEWQR 461
>gi|42783452|ref|NP_980699.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 10987]
gi|42739381|gb|AAS43307.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 10987]
Length = 773
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/258 (15%), Positives = 83/258 (32%), Gaps = 28/258 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 270 LYMILAGASPSVIRASITGVFMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSTPLLLESGNGVIRNSIY------ISFISQLVSTPILLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS VV+ ++ ++ + + L V++ GL++
Sbjct: 382 IFLNILYVPFLSLVVLSCSIVILICIPVIPFLAKRLANVLSIGLNLSNDFLSYCENLP-- 439
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
F +TS + + + + +++ + + G + I + + + + P
Sbjct: 440 FTRLNFGQTSILLVALYCVSIISILMVWERRMA-KGILFISAGVFLFISTCHYVYP--YF 496
Query: 226 SEKGNLVALVDKNTLISN 243
E G++ L
Sbjct: 497 RESGSVTFLDVGQGDAIL 514
>gi|229031976|ref|ZP_04187961.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1271]
gi|228729331|gb|EEL80323.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1271]
Length = 773
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 23/168 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 270 LYMILAGASPSVIRASITGVLMLIAFICSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESSNGVIRNSIY------ISLISQLVSTPVLLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
+ NIL +P LS +V+P +I ++ + + +A GL ++ I
Sbjct: 382 IFLNILYVPFLSLIVLPCSIIILVCIPI------VPFLAKGLANVLSI 423
>gi|289262|gb|AAC36907.1| comE ORF3 [Bacillus subtilis]
Length = 776
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 72/239 (30%), Gaps = 25/239 (10%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ I L F F +F+ +
Sbjct: 309 CLSYIVLLLFNPYHLFEAGFQLSFA---------------------VSFSLILSSSIFQQ 347
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+K S + + L+ HFH + + N+L +P +F ++P + +L
Sbjct: 348 VKTSLGQ--LTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGAVAGVL 405
Query: 136 LMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L+ L S + F + I + I+ + P + + ++++
Sbjct: 406 LLSLSASFGRLFFSWFDLLISWINRLITNIADVDVFTIMIAHPAPILLFLFTVTIILLLM 465
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF 252
R + +M+ I F P L + +++ + +++ + +
Sbjct: 466 AIEKRSLSQLMVTGGICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVGAPHQRGRVL 524
>gi|16272035|ref|NP_438234.1| recombination protein [Haemophilus influenzae Rd KW20]
gi|260580635|ref|ZP_05848462.1| recombination protein 2 [Haemophilus influenzae RdAW]
gi|1172877|sp|P44408|REC2_HAEIN RecName: Full=Recombination protein 2
gi|1573009|gb|AAC21739.1| recombination protein (rec2) [Haemophilus influenzae Rd KW20]
gi|260092697|gb|EEW76633.1| recombination protein 2 [Haemophilus influenzae RdAW]
Length = 788
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 19/191 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPIQFFTLVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLLLWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + + G + + F+ + + G +AN +A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWIFSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANFMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G+ +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWLTVSFNLALGLTA 462
Query: 183 IVVEFLLMVFC 193
+ +++
Sbjct: 463 LCAGIFMLIIW 473
>gi|229129606|ref|ZP_04258574.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-Cer4]
gi|228653723|gb|EEL09593.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-Cer4]
Length = 659
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-N 168
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 268 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 327
Query: 169 EFCIGRIPETSFVTIVVEFL-LMVFCKTNI 197
+ G P + +++ +
Sbjct: 328 QLIFGETPLNLVAVYCASIVSILMVWERRA 357
>gi|330445703|ref|ZP_08309355.1| DNA internalization-related competence protein ComEC/Rec2
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489894|dbj|GAA03852.1| DNA internalization-related competence protein ComEC/Rec2
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 771
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 84/237 (35%), Gaps = 11/237 (4%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
++ +F + ++ + F + ++ + + +S+ + I +
Sbjct: 333 AIYSASFWLSFYAVAVLVLFSVGQRYFPLAKIPH----RTLSTTQLHASFLQLVKIQCWL 388
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAW 151
F I +AN+ A+P +SF+ +P L+A++ L + L +I + W
Sbjct: 389 LVLMLPIQWLWFGGISFAAPVANLFAVPWISFITVPFVLLAVMTLWLPILSSILWQCANW 448
Query: 152 GLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
L I+ + + + S + IV+ L+ F + ++ + + + I
Sbjct: 449 SLFPIVEGIAWLKGAWYGLSTSYQPLLWSVIIIVLGATLLPFKRFKWLYLSLLFLSVMGI 508
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
+ + S +++ L ++ K Y W+ ++ P
Sbjct: 509 LKPSKKPSQWQIMVLDVGHGLAVIIHKAGRAILYDTGNR-----WQENVVAESTILP 560
>gi|321312042|ref|YP_004204329.1| DNA channel for uptake in competent cells [Bacillus subtilis BSn5]
gi|320018316|gb|ADV93302.1| DNA channel for uptake in competent cells [Bacillus subtilis BSn5]
Length = 775
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 73/249 (29%), Gaps = 27/249 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ + + I L F F +F+
Sbjct: 300 RVHSATAI--CLSYIVLLLFNPYHLFEAGFQLSFA---------------------VSFS 336
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ +K S + + L+ HFH + + N+L +P +F
Sbjct: 337 LILSSSIFQQVKTSLGQ--LTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFC 394
Query: 126 VIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++P + +LL+ L S + F + + I+ + P + +
Sbjct: 395 ILPGAVAGVLLLSLSASFGRLFFSWFDLLISWTNRLITNIADVDVFTIMIAHPAPVLLFL 454
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
++++ R + +MI I F P L + +++ + +++
Sbjct: 455 FTVAIILLLMAIEKRSLSQLMITGGICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVG 514
Query: 244 YSNPPSFIF 252
+ +
Sbjct: 515 APHQRGRVL 523
>gi|229152529|ref|ZP_04280719.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus m1550]
gi|228630895|gb|EEK87534.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus m1550]
Length = 773
Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 270 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-N 168
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 382 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 441
Query: 169 EFCIGRIPETSFVTIVVEFL-LMVFCKTNI 197
+ G P + +++ +
Sbjct: 442 QLIFGETPLNLVAVYCASIVSILMVWERRA 471
>gi|30022403|ref|NP_834034.1| ComE operon protein 3 [Bacillus cereus ATCC 14579]
gi|29897961|gb|AAP11235.1| ComE operon protein 3 [Bacillus cereus ATCC 14579]
Length = 773
Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 270 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-N 168
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 382 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 441
Query: 169 EFCIGRIPETSFVTIVVEFL-LMVFCKTNI 197
+ G P + +++ +
Sbjct: 442 QLIFGETPLNLVAVYCASIVSILMVWERRA 471
>gi|229175000|ref|ZP_04302519.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus MM3]
gi|228608461|gb|EEK65764.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus MM3]
Length = 659
Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 23/168 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 156 LYMILAGASPSVIRASITGVLMLIAFICSIRLSSLDALSVTAICMLIFDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLDSSNGVIRNSIY------ISFISQLVSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
+ NIL +P LS +V+P +I ++ + + +A GL ++ I
Sbjct: 268 IFLNILYVPFLSLIVLPCSIIVLVCIPI------VPFLAKGLANVLSI 309
>gi|270159268|ref|ZP_06187924.1| DNA internalization-related competence protein ComEC/Rec2
[Legionella longbeachae D-4968]
gi|289165908|ref|YP_003456046.1| DNA uptake/competence proteins [Legionella longbeachae NSW150]
gi|269987607|gb|EEZ93862.1| DNA internalization-related competence protein ComEC/Rec2
[Legionella longbeachae D-4968]
gi|288859081|emb|CBJ13010.1| putative DNA uptake/competence proteins [Legionella longbeachae
NSW150]
Length = 740
Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 79/253 (31%), Gaps = 33/253 (13%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ P+ L P F F + ++ + ++ S
Sbjct: 302 RFTPWQVWRYALCGVLLIEPHAV-----FMQGFYFSFLAVACLLLTQQRWRLKGYKAS-- 354
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ + + + G IAN+ AIP++ ++
Sbjct: 355 -------------------LALQLSCLIGLMPLTLYWYAYGSINGFIANLFAIPLVGLLI 395
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDII---IHIAHRISVAHNEFCIGRIPETSFVTI 183
+P L+ + + LS+ I ++ + ++ + ++ ++ + I I E + V I
Sbjct: 396 VPLSLMTMTVSSLSIAKILMKAVSLLITLLFKGLSLSEYLAALNINCPIYSI-ELALVLI 454
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIII--LFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
+ ++ + I + + + D+L +G VA+ ++ +
Sbjct: 455 GALLMWVLLPTKPFQWIAMLWLLLPFFPPRTIIQAGEAKIDVLDVGQGLAVAIRTQH-HV 513
Query: 242 SNYSNPPSFIFSQ 254
Y F
Sbjct: 514 LLYDTGDRFFQGN 526
>gi|56751655|ref|YP_172356.1| competence protein ComE [Synechococcus elongatus PCC 6301]
gi|56686614|dbj|BAD79836.1| competence protein ComE [Synechococcus elongatus PCC 6301]
Length = 728
Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 74/210 (35%), Gaps = 24/210 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + ++ W +++ I + +
Sbjct: 355 GFQFSFLATLGLVVSV----------RPITDRLDWLPPRLA---------ILIAVPLAAT 395
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ F + Y + AN+L P+L+ + + +L +I L ++ +++
Sbjct: 396 LWTLPLQLHAFGTLSPYAIPANVLVTPLLASLGMGGVWAGLLSLIWLPLGSVAAWLLSAP 455
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFC---KTNIRHIGSIMIGIT 208
L ++I + I+ + G+I + + + L++ + R + +I I
Sbjct: 456 LWLLISLVSTIANLPGATWATGQIALIVVLLCYLSYALLLTWPRLRRRWRSLAVALIAIV 515
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVDKN 238
++ + L ++ G L + D+
Sbjct: 516 LLPGLAQAATQQEILFLNSDGPLAVVRDRG 545
>gi|60683120|ref|YP_213264.1| putative competence related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|60494554|emb|CAH09353.1| putative competence related membrane protein [Bacteroides fragilis
NCTC 9343]
Length = 699
Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 17/188 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI Y + + ++
Sbjct: 357 LFDVGFQLSFSAVAAILLLYPWLFR------QLPVGNSLLKKVW------ALMSVSLAAQ 404
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F P + L+ N+L IP++S + + A + ++L + V+ L
Sbjct: 405 IGTAPLVLLYFSRFPTHFLLTNLLVIPLVSGI-MYATVALLVLTPFPMLYTGCSVVVRSL 463
Query: 154 -DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D + + + + T F L++ + + S+ I
Sbjct: 464 VDWLNTMVRWVEHLPLASIDR---VWIYPTEAFAFYLVLLIGIRYKVVRSLKCLYVFGIC 520
Query: 213 FTFPYSFS 220
SF
Sbjct: 521 ILAMGSFH 528
Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 17/214 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + A +SPPS P FD+ YKGIS I + S I +
Sbjct: 150 LRSGDELIFFAHVSPPSNNGNPDEFDYARYLRYKGISGIAFVASGNWKITGYRFSRSCRQ 209
Query: 71 KKISSIKQSFLNEIRAN-IGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPIL 122
+ + L++ RA A + + + + +++LA+ L
Sbjct: 210 IALEY-RDRILDQYRALKFNPDEFAVLAALTVGYKEELSEDIRETYSVSGASHVLALSGL 268
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
G + ++L+ L +P +G+ + + ++ F G P
Sbjct: 269 HI-----GFLYMMLL-FFLKWLPGNA--FGVRLFRAVVIITALWGFAFFTGLSPSVVRSV 320
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
I+ L + + + I+L P
Sbjct: 321 IMFSLLALSVLSRRTGISLNTLALTACIMLVVHP 354
>gi|145629075|ref|ZP_01784874.1| recombination protein [Haemophilus influenzae 22.1-21]
gi|144978578|gb|EDJ88301.1| recombination protein [Haemophilus influenzae 22.1-21]
Length = 703
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 61/192 (31%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPLQLFTLVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLLLWYR-----YMPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + + G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWIFSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G+ +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWFNVSFNLALVLTA 462
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 463 LCAGIFMLIIWR 474
>gi|301164632|emb|CBW24191.1| putative competence related membrane protein [Bacteroides fragilis
638R]
Length = 699
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 17/188 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI Y + + ++
Sbjct: 357 LFDVGFQLSFSAVAAILLLYPWLFR------QLPVGNSLLKKVW------ALMSVSLAAQ 404
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F P + L+ N+L IP++S + + A + ++L S+ V+ L
Sbjct: 405 IGTAPLVLLYFSRFPTHFLLTNLLVIPLVSGI-MYATVALLVLTPFSMLYTGCSVVVRSL 463
Query: 154 -DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D + + + + T F L++ + + S+ I
Sbjct: 464 VDWLNTMVRWVEHLPLASIDR---VWIYPTEAFAFYLVLLIGIRYKVVRSLKCLYVFGIC 520
Query: 213 FTFPYSFS 220
SF
Sbjct: 521 ILAMGSFH 528
Score = 43.3 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 17/214 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + A +SPPS P FD+ YKGIS I + S I +
Sbjct: 150 LRSGDELIFFAHVSPPSNNGNPDEFDYARYLRYKGISGIAFVASGNWKITGYRFSRSCRQ 209
Query: 71 KKISSIKQSFLNEIRAN-IGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPIL 122
+ + L++ RA A + + + + +++LA+ L
Sbjct: 210 IALEY-RDRILDQYRALKFNPDEFAVLAALTVGYKEELSEDIRETYSVSGASHVLALSGL 268
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
G + ++L+ L +P +G+ + + ++ F G P
Sbjct: 269 HI-----GFLYMMLL-FFLKWLPGNA--FGVRLFRAVVIITALWGFAFFTGLSPSVVRSV 320
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
I+ L + + + I+L P
Sbjct: 321 IMFSLLALSVLSRRTGISLNTLALTACIMLVVHP 354
>gi|68248612|ref|YP_247724.1| recombination protein 2 [Haemophilus influenzae 86-028NP]
gi|68056811|gb|AAX87064.1| recombination protein 2 [Haemophilus influenzae 86-028NP]
Length = 788
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 60/191 (31%), Gaps = 19/191 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPIQLFTLVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLLLWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + + G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWIFSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G+ +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWFNVSFNLALVLTA 462
Query: 183 IVVEFLLMVFC 193
+ +++
Sbjct: 463 LCAGIFMLIIW 473
>gi|228960595|ref|ZP_04122242.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228799074|gb|EEM46044.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 659
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 268 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 327
Query: 170 FCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
I + V + + +++ +
Sbjct: 328 QLIFGETPFNLVAVYCASIVSILMVWERRA 357
>gi|81301267|ref|YP_401475.1| ComEC/Rec2-related protein [Synechococcus elongatus PCC 7942]
gi|81170148|gb|ABB58488.1| ComEC/Rec2-related protein [Synechococcus elongatus PCC 7942]
Length = 724
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 74/210 (35%), Gaps = 24/210 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + ++ W +++ I + +
Sbjct: 351 GFQFSFLATLGLVVSV----------RPITDRLDWLPPRLA---------ILIAVPLAAT 391
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ F + Y + AN+L P+L+ + + +L +I L ++ +++
Sbjct: 392 LWTLPLQLHAFGTLSPYAIPANVLVTPLLASLGMGGVWAGLLSLIWLPLGSVAAWLLSAP 451
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFC---KTNIRHIGSIMIGIT 208
L ++I + I+ + G+I + + + L++ + R + +I I
Sbjct: 452 LWLLISLVSTIANLPGATWATGQIALIVVLLCYLSYALLLTWPRLRRRWRSLAVALIAIV 511
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVDKN 238
++ + L ++ G L + D+
Sbjct: 512 LLPGLAQAATQQEILFLNSDGPLAVVRDRG 541
>gi|228954612|ref|ZP_04116636.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228805058|gb|EEM51653.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 659
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLESSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 268 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 327
Query: 170 FCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
I + V + + +++ +
Sbjct: 328 QLIFGETPFNLVAVYCASIVSILMVWERRA 357
>gi|229111799|ref|ZP_04241345.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock1-15]
gi|228671555|gb|EEL26853.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock1-15]
Length = 659
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 268 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 327
Query: 170 FCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
I + V + + +++ +
Sbjct: 328 QLIFGETPFNLVAVYCASIVSILMVWERRA 357
>gi|229146897|ref|ZP_04275261.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST24]
gi|228636496|gb|EEK92962.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST24]
Length = 659
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 268 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 327
Query: 170 FCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
I + V + + +++ +
Sbjct: 328 QLIFGETPFNLVAVYCASIVSILMVWERRA 357
>gi|229048032|ref|ZP_04193607.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH676]
gi|228723276|gb|EEL74646.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH676]
Length = 659
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 268 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 327
Query: 170 FCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
I + V + + +++ +
Sbjct: 328 QLIFGETPFNLVAVYCASIVSILMVWERRA 357
>gi|229081589|ref|ZP_04214085.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock4-2]
gi|228701695|gb|EEL54185.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock4-2]
Length = 659
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 268 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 327
Query: 170 FCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
I + V + + +++ +
Sbjct: 328 QLIFGETPFNLVAVYCASIVSILMVWERRA 357
>gi|229071832|ref|ZP_04205045.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus F65185]
gi|228711262|gb|EEL63224.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus F65185]
Length = 659
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLESSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 268 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 327
Query: 170 FCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
I + V + + +++ +
Sbjct: 328 QLIFGETPFNLVAVYCASIVSILMVWERRA 357
>gi|253566320|ref|ZP_04843774.1| competence protein [Bacteroides sp. 3_2_5]
gi|251945424|gb|EES85862.1| competence protein [Bacteroides sp. 3_2_5]
Length = 699
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 17/188 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI Y + + ++
Sbjct: 357 LFDVGFQLSFSAVAAILLLYPWLFR------QLPVGNSLLKKVW------ALMSVSLAAQ 404
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F P + L+ N+L IP++S + + A + ++L + V+ L
Sbjct: 405 IGTAPLVLLYFSRFPTHFLLTNLLVIPLVSGI-MYATVALLVLTPFPMLYTGCSVVVRSL 463
Query: 154 -DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D + + + + T F L++ + + S+ I
Sbjct: 464 VDWLNTMVRWVEHLPLASIDR---VWIYPTEAFAFYLVLLIGIRYKVVRSLKCLYVFGIC 520
Query: 213 FTFPYSFS 220
SF
Sbjct: 521 ILAMGSFH 528
Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 17/214 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + A +SPPS P FD+ YKGIS I + S I +
Sbjct: 150 LRSGDELIFFAHVSPPSNNGNPDEFDYARYLRYKGISGIAFVASGNWKITGYRFSRSCRQ 209
Query: 71 KKISSIKQSFLNEIRAN-IGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPIL 122
+ + L++ RA A + + + + +++LA+ L
Sbjct: 210 IALEY-RDRILDQYRALKFNPDEFAVLAALTVGYKEELSEDIRETYSVSGASHVLALSGL 268
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
G + ++L+ L +P +G+ + + ++ F G P
Sbjct: 269 HI-----GFLYMMLL-FFLKWLPGNA--FGVRLFRAVVIITALWGFAFFTGLSPSVVRSV 320
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
I+ L + + + I+L P
Sbjct: 321 IMFSLLALSILSRRTGISLNTLALTACIMLVVHP 354
>gi|322832234|ref|YP_004212261.1| DNA internalization-related competence protein ComEC/Rec2 [Rahnella
sp. Y9602]
gi|321167435|gb|ADW73134.1| DNA internalization-related competence protein ComEC/Rec2 [Rahnella
sp. Y9602]
Length = 748
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 82/251 (32%), Gaps = 32/251 (12%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + L P +F + A+ +++ + + W
Sbjct: 294 PCQIWLWVVAMLLLVDPMNLLS-----DSFWLSCFAVGALVFWFQWVPLPAMFQQAWYWA 348
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ ++ + + FH + V+ AN+ A+P++S + +P
Sbjct: 349 LFRWGHLQVGM------------TLLLLPLQVWIFHGVNVFSFPANMWAVPVVSLITVPL 396
Query: 130 GLIAILLMILS------LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
L+A+L + + + L + + + + + + E+
Sbjct: 397 VLLALLTNAAPCALMDNAQALLWQLADATLRLALW---GVKALPDGWI--PLGESFLAVS 451
Query: 184 VVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNT 239
++ +L+++ + +R+ S+++ + I + S + L L+ KN
Sbjct: 452 LMGWLVLLCWRICPLRYCLSLLLSLFAISSVWLNRNPSERWRVDMLDIGHGLSVLISKNG 511
Query: 240 LISNYSNPPSF 250
Y +
Sbjct: 512 RGILYDTGNRW 522
>gi|81241712|gb|ABB62422.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 780
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 325 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 373
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 374 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 427
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 428 TVPLILAAMVVHLSGPLILEQGLWFLAGRSLALLFW---GLKSLPEGWINIAERWQWLSF 484
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 485 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 523
>gi|305386|gb|AAC13733.1| recombination protein [Haemophilus influenzae]
Length = 800
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 19/191 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + +Y Y
Sbjct: 301 MRRHYSPIQFFTLVVGFLLFCDPLMPLS-----VSFWLSCGAVGCLLLWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + + G + + F+ + + G +AN +A+PI S
Sbjct: 351 SLFQWKNRPFSPKVRWIFSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANFMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
F+++P L A+ +A G+ +I + +
Sbjct: 409 FLLVPLILFAVFTNGTMFSWQLANKLAEGITGLISV------FQGNWLTVSFNLALGLTA 462
Query: 183 IVVEFLLMVFC 193
+ +++
Sbjct: 463 LCAGIFMLIIW 473
>gi|296504818|ref|YP_003666518.1| ComE operon protein 3 [Bacillus thuringiensis BMB171]
gi|296325870|gb|ADH08798.1| ComE operon protein 3 [Bacillus thuringiensis BMB171]
Length = 773
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 270 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 382 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 441
Query: 170 FCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
I + V + + +++ +
Sbjct: 442 QLIFGETPFNLVAVYCASIVSILMVWERRA 471
>gi|255011311|ref|ZP_05283437.1| putative competence related membrane protein [Bacteroides fragilis
3_1_12]
gi|313149121|ref|ZP_07811314.1| competence protein [Bacteroides fragilis 3_1_12]
gi|313137888|gb|EFR55248.1| competence protein [Bacteroides fragilis 3_1_12]
Length = 672
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 68/194 (35%), Gaps = 19/194 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI Y + KK+ ++ +
Sbjct: 330 LFDVGFQLSFSAVTAILLIYPRLFRLLPIG---NGVLKKVWAL---------MCVSLAAQ 377
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
+ ++ +F + L+ N+L IP++S V++ + +I +++ S L + +
Sbjct: 378 IGTAPLVLLYFSRFSTHFLLTNLLVIPLVS-VIMYSAVILLVVSPFSQLYTWCAVAVKFL 436
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR-----HIGSIMIGI 207
+D++ + + V LL +R ++ + + +
Sbjct: 437 IDLLNAAVRWVEHLPLASIDNVWIYPAEVLAFYLALLACMRHMMVRSAKSLYLVGVCLLV 496
Query: 208 TIIILFTFPYSFSP 221
T + + + + P
Sbjct: 497 TGSLHWAWRMADRP 510
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 64/216 (29%), Gaps = 27/216 (12%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT---- 69
+ +AR+SPPS P FD+ Y+GI + + I ++
Sbjct: 126 GDELVLMARVSPPSNNGNPDEFDYARYLRYRGIGGVAFVAEGKWQIIGHRMSRSFRQIAL 185
Query: 70 ---------WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
++ + F +G I +++LA+
Sbjct: 186 DCRDRILDKYRALKFEPDEFAVLAALTVGYKEELGEDIRETY------SVSGASHVLALS 239
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
L G + +LL++L WG+ + I ++ F G P
Sbjct: 240 GLHI-----GFLYMLLLLLLKWLPGNV---WGVRLFRAIVIITALWGFAFITGLSPSVVR 291
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
I+ L + + + I+L P
Sbjct: 292 SVIMFSLLALSVLSGRTGISLNTLALTAFIMLAVHP 327
>gi|75910535|ref|YP_324831.1| ComEC/Rec2-like protein [Anabaena variabilis ATCC 29413]
gi|75704260|gb|ABA23936.1| ComEC/Rec2-related protein [Anabaena variabilis ATCC 29413]
Length = 798
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 76/221 (34%), Gaps = 23/221 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ +K + I + P ++D F + + + +
Sbjct: 360 LALDRKVKQLGSLLLAATILLVFNPLW-----IWDLGFQLSFLAT------LGLVVSVPA 408
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S W I+S+ ++ + + F +P Y L+ NI+ P+
Sbjct: 409 ITSFLDWVPPAIASL---------ISVPLAATIWTLPLQLFVFGVVPAYSLLLNIITTPL 459
Query: 122 LSFVVIPAGLIAI-LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+S + I + A+ L++ + G + + D +I + S + T
Sbjct: 460 ISIISIGGIISAMFALILPGAGSFVAGFLHYPTDWLIRLVEIFSQLPGNSLVLGSISTWQ 519
Query: 181 VTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFTFPYSF 219
+ + + +V+ T R + +I I +++ + +
Sbjct: 520 LLAIYGLVFLVWLVTWWQKRWWFAGLIAIGLVLFPAWHSAS 560
>gi|256820927|ref|YP_003142206.1| ComEC/Rec2-related protein [Capnocytophaga ochracea DSM 7271]
gi|256582510|gb|ACU93645.1| ComEC/Rec2-related protein [Capnocytophaga ochracea DSM 7271]
Length = 636
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 53/135 (39%), Gaps = 14/135 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F Y + +I FY + + W+ + Q + +G
Sbjct: 351 LYDVGFQLSYAAVFSIMKFYPVMRK----------WWQPENKYLQWIWSLFL--VGLSAQ 398
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
+ +FH P+ ++N++ +P+L ++I G+I++ L L + ++
Sbjct: 399 IVVLPISLYYFHQFPILFFVSNLVVVPLLQPILI-GGIISLCLGSLGILPYAIVFILEKL 457
Query: 153 LDIIIHIAHRISVAH 167
+ ++ + I+
Sbjct: 458 IALMNFLVAFIAHQE 472
>gi|270261194|ref|ZP_06189467.1| hypothetical protein SOD_a04190 [Serratia odorifera 4Rx13]
gi|270044678|gb|EFA17769.1| hypothetical protein SOD_a04190 [Serratia odorifera 4Rx13]
Length = 773
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/261 (13%), Positives = 82/261 (31%), Gaps = 29/261 (11%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
G+ + P +F ++ + +++ M S+ + W W + +
Sbjct: 334 GLILVCDPLAVLS-----DSFWLSVLAVACLIFWFE--WMPLSARFRSAWYWAPVRWLH- 385
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
I + F + + + AN+ A+P++S V +P LIA++
Sbjct: 386 ---------IQFGITLLLVPMQAALFLGLTLTSMPANLWAVPVVSLVTVPLILIAVICGA 436
Query: 139 LS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
L L + + L + H + + + S + +LL+++ + +
Sbjct: 437 LPLLSGGFWWLADLTLLWVFTPLHYL-----QRGWVDLGAASLLVSAAGWLLVIYWRFHW 491
Query: 198 RHIGSIMIGITIIILFTFPYSFSP-----DLLISEKGNLVALVDKNTLISNYSNPPSFIF 252
+ I + P D+L L ++++N + +
Sbjct: 492 WLCYPAGLAAVAICCVLWREKEPPYRWRVDML-DVGHGLAVVIERNGKGILFDTGDRWAT 550
Query: 253 SQWKSALITPFHEAPHVQKED 273
I P + E
Sbjct: 551 GSAAERHILPMLNWRGIDLEQ 571
>gi|218899493|ref|YP_002447904.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus G9842]
gi|218542466|gb|ACK94860.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus G9842]
Length = 773
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 61/174 (35%), Gaps = 39/174 (22%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ + P +I G+ RLS + + F+ F
Sbjct: 270 LYMVLAGASPSVIRASIAGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPYLVFNIGFQF 329
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ SS I+ S I + + ++ L+
Sbjct: 330 SF--VGSFALLLSAPFLLGSSNG----------VIRNSIYISIISQL------VSTPILL 371
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGL 153
HF Y + N+L +P LS +V+P +I +L M + L V++ GL
Sbjct: 372 YHFGYFSPYSIFLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGL 425
>gi|228923078|ref|ZP_04086370.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228836576|gb|EEM81925.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 659
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-N 168
++ N+L +P LS +V+P +I +L M + L +++ GL +
Sbjct: 268 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKEFADILSIGLSMSNDFLSYCESLPFT 327
Query: 169 EFCIGRIPETSFVTIVVEFL-LMVFCKTNI 197
+ G+ P + +++ +
Sbjct: 328 QLIFGKTPFNLVAVYCASIVSILMVWERRA 357
>gi|88803621|ref|ZP_01119146.1| competence protein [Polaribacter irgensii 23-P]
gi|88780633|gb|EAR11813.1| competence protein [Polaribacter irgensii 23-P]
Length = 646
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 66/181 (36%), Gaps = 17/181 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F Y + I + ++YS I + I +
Sbjct: 317 LFDVGFQLSYLAVFGIVWLQPKLVVLYSPRFI----------ISRKIWQLI--TVSIAAQ 364
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
A I +FH P +++N++ IP L F+++ ++ +L ++ L + + +
Sbjct: 365 AGILPLSIYYFHQFPGLFIVSNVVIIPFLGFILMGGIVVVVLSLLQLLPSFLVVIYGGLI 424
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVV-EFLL---MVFCKTNIRHIGSIMIGITI 209
++ + IS F + + + +V L + K N +G ++ I
Sbjct: 425 SLMNGFVNWIS-LQESFLFKDLGISFLMLLVFYGLLFTGVLFLIKKNTWRLGCFLLAILC 483
Query: 210 I 210
+
Sbjct: 484 L 484
>gi|303237723|ref|ZP_07324283.1| ComEC/Rec2-like protein [Prevotella disiens FB035-09AN]
gi|302482175|gb|EFL45210.1| ComEC/Rec2-like protein [Prevotella disiens FB035-09AN]
Length = 511
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 47/156 (30%), Gaps = 16/156 (10%)
Query: 16 TIEGIARLSPPSGPAFP-GLFDFNFSSYYKGISAIGYFYSIP-KMIYSSESHNTWTWKKI 73
+ I L P L+D F + + I F + ++ W + +
Sbjct: 334 ALTAIIML-----VVNPLNLWDIGFQLSFIAVLFILLFSPLIYGIVPRKRLQRFWILRWV 388
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ + + + +F Y L++N + IP + ++ A L+
Sbjct: 389 WGLV---------TVSVAAQIGTAPLVAYYFSRFSCYFLLSNFVVIPCATLILYAAVLLF 439
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ I + M + + H I+
Sbjct: 440 LFSFIPVVQAFIGNFMLLTIQFMNKSLHTIAHWQGA 475
>gi|53803220|ref|YP_115031.1| DNA internalization-related competence protein ComEC/Rec2
[Methylococcus capsulatus str. Bath]
gi|53756981|gb|AAU91272.1| DNA internalization-related competence protein ComEC/Rec2
[Methylococcus capsulatus str. Bath]
Length = 801
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 64/213 (30%), Gaps = 28/213 (13%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P PG F + ++ I Y + WT
Sbjct: 351 DPLAVTSPG-----FWLSFLAVAFILYLLTGRLHRPGLVGGLAWT--------------- 390
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLD 142
S + L+ F I + +AN+ A+P+L + P L + L++++ ++
Sbjct: 391 ----NWATSLGLAPVLLFFFGQISLVSPLANLFAVPVLGLAITPLALFSALVLLVWPAVG 446
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI-VVEFLLMVFCKT-NIRHI 200
+ G + +S P + + +++ + R +
Sbjct: 447 EVLMGFTETLVAWSWKALEWLSALSWAQWQHAAPPFPMALLAALGVAVLMVPRGIPGRWL 506
Query: 201 GSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
G ++ P S L + + G +A
Sbjct: 507 GLFLLLPAATHAPAPPPEGSYRLTVLDVGQALA 539
>gi|17229475|ref|NP_486023.1| competence protein [Nostoc sp. PCC 7120]
gi|17131073|dbj|BAB73682.1| competence protein [Nostoc sp. PCC 7120]
Length = 798
Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 75/221 (33%), Gaps = 23/221 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ +K + I + P ++D F + + + +
Sbjct: 360 LALDRKVKQLGSLLLAATILLVFNPLW-----IWDLGFQLSFLAT------LGLVVSVPA 408
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S W I+S+ ++ + + F +P Y L+ NI+ P+
Sbjct: 409 ITSFLGWIPPAIASL---------ISVPLAATIWTLPLQLFVFGVVPAYSLLLNIITTPL 459
Query: 122 LSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+S + I + A+ +IL + G + + D +I + S I T
Sbjct: 460 ISIISIGGIISAMFALILSGAGSFVAGFLHYPTDWLIKLVEIFSQLPGNSLIVGSISTWQ 519
Query: 181 VTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFTFPYSF 219
+ + + +V+ R + ++ I +++ + +
Sbjct: 520 LLAIYGLVFLVWLVNWWQKRWWFAGLMAIGLVLFPAWHSAS 560
>gi|222110147|ref|YP_002552411.1| DNA internalization-like competence protein comec/rec2 [Acidovorax
ebreus TPSY]
gi|221729591|gb|ACM32411.1| DNA internalization-related competence protein ComEC/Rec2
[Acidovorax ebreus TPSY]
Length = 861
Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 85/246 (34%), Gaps = 28/246 (11%)
Query: 1 MLSITKKYDPFPAETTIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L ++ + P+P + L+ P PG F + ++ +
Sbjct: 387 LLRLSGRRWPWPQVWLLACAVVLAVDPWALLQPG-----FWLSFVAVAVLFA-------- 433
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ I F +R + + L+ F + + GL+AN++AI
Sbjct: 434 ----TDLGAASAYPVGITGRFYALLREQWVVTLALTPLTLLL--FGQVALVGLLANLVAI 487
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPET 178
P + VV P L+ +L L + AW + + + ++ + P+
Sbjct: 488 PWTTLVVTPLALLGVLWAPL------WQAAAWCVQALSVLLQWLAAWPWAQVALPMAPQW 541
Query: 179 SFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
+ V +L+ +R +G ++ + P +LL ++ G A++ +
Sbjct: 542 AGAAAVTGGVLLALRLPWGVRALGLALLLPALWWQPARPQPGQFELLAADVGQGQAVLVR 601
Query: 238 NTLISN 243
+
Sbjct: 602 TARHAL 607
>gi|317128289|ref|YP_004094571.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cellulosilyticus DSM 2522]
gi|315473237|gb|ADU29840.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cellulosilyticus DSM 2522]
Length = 769
Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/233 (11%), Positives = 76/233 (32%), Gaps = 26/233 (11%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+I I L F F +F + + I + S
Sbjct: 307 SILCIVLLIINPFYIFHLGFQLSFLTSFSLILSQ------------------------SL 342
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ + + + ++ HF+ I + ++ N++ IP +S ++P + ++
Sbjct: 343 LNDTNKIFTLFKVTFIAQLVSMPLILYHFYEISLLSVVINLIFIPFISMWILPLSFLTVI 402
Query: 136 --LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L+ L ++ F + + L + S + + P + ++ F+++
Sbjct: 403 FQLLFPPLSHVTFYIASTSLSFSHKVLDVASKWKWDMLVFGQPSIYILVLLYAFIILCLV 462
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN 246
+ + I +++I F P + ++ + + ++
Sbjct: 463 SFEKKIVILKWISSSLLIGVLSFQYFQPYFYAFAELTILDVGQGDAIVITLPR 515
>gi|254479243|ref|ZP_05092587.1| Competence protein [Carboxydibrachium pacificum DSM 12653]
gi|214034812|gb|EEB75542.1| Competence protein [Carboxydibrachium pacificum DSM 12653]
Length = 448
Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 20/141 (14%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K + + + + L P L+D F + AI YFY
Sbjct: 297 KNKNSINSLSFAAFLILLFNPL-----MLWDVGFQLSFVATLAILYFYRP---------- 341
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++ + I N+ F++ +FH I ++NI +P+++
Sbjct: 342 ---IDERLFKLPSYLKGIIALNLS--AQIGTIPFVMYYFHYISFVSFLSNIAIVPLVNIA 396
Query: 126 VIPAGLIAILLMILSLDNIPF 146
+I + L A L + ++
Sbjct: 397 IILSFLSAFLGFVFPTASVFV 417
>gi|255027537|ref|ZP_05299523.1| hypothetical protein LmonocytFSL_16435 [Listeria monocytogenes FSL
J2-003]
Length = 559
Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/234 (12%), Positives = 89/234 (38%), Gaps = 16/234 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P ++ ++T + +Q +I
Sbjct: 295 WSSFSAICLSFILFFLLQPYVMKEVGFQLSYTVSFGIILSSRQILAQQQNAFTKSLSISF 354
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S+ ++ HF+ G+ N++ +PI + +++P L +L S + + P V
Sbjct: 355 ISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHFPEVV 414
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + ++ + + + ++ + P + +++ +++ F + G ++
Sbjct: 415 LTFFIQLVEKLTYIFAKIPHQTIVTGRPNILILMLIIITIIIFFNQWQKKKFPFGILICF 474
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ +F +S + +G+ + + ++ + + F W
Sbjct: 475 CFLCYFSSFNFSGKVSFIDVGQGDSILIQLPYNQGNYLIDTGGQLPFEKEAWAK 528
>gi|226952099|ref|ZP_03822563.1| competence factor involved in DNA uptake [Acinetobacter sp. ATCC
27244]
gi|226837155|gb|EEH69538.1| competence factor involved in DNA uptake [Acinetobacter sp. ATCC
27244]
Length = 812
Score = 67.9 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/250 (9%), Positives = 72/250 (28%), Gaps = 17/250 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + F + + P F Y + Y +
Sbjct: 341 MCLRQSIQAFSVLVYSASLLLVLDPFSILS-----AAFWLSYGACFILIRIYQTIIQLPQ 395
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
K + + I + ++ F + + + N++AIP+
Sbjct: 396 -------NVNLTFKRKMIWGSHILIESQWKIFVALLPLVLIFFQQVSWFAPLTNLIAIPL 448
Query: 122 LSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
L ++P ++A + ++ +L F + L ++ I + +
Sbjct: 449 LGACIVPLDILAACVWLITPTLGQWLFQMNDVFLSFLMLILDVLQSISPQLYGISFTPWM 508
Query: 180 FVTIVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
V++++ L+ + + + ++ + + +L +G V +
Sbjct: 509 MVSLIIGIFLLFLPRGIVPKFWAAVCFLPIFWGVK--AQPEALHVLDVGQGQAVLVQHTK 566
Query: 239 TLISNYSNPP 248
+ +
Sbjct: 567 GNLLIDTGGS 576
>gi|325981945|ref|YP_004294347.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas sp. AL212]
gi|325531464|gb|ADZ26185.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas sp. AL212]
Length = 786
Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 84/261 (32%), Gaps = 39/261 (14%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+L I ++ L P PG F + I+ I
Sbjct: 325 VLWIGRQSSVTTVLAWALFGVILLDPWAILAPG-----FWLSFGAIAVIMLL-------- 371
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
KI + + +G A F + + +AN +AIP
Sbjct: 372 -----TAGRIGKIHWLSSWLRIQWAITLGLIPLLLAL------FQQVSLISPVANAIAIP 420
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETS 179
++S +V+P L+A + + + + V L +++ I +S + + P +
Sbjct: 421 LISLIVVPLTLLATIPVFDFMLPLIHDV----LSVLMVILQSLSNLSHTVWQQHSPPVWT 476
Query: 180 FVTIVVEFLLMVFCKT---------NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
V+ L M+ + R +G I + ++ P + L + + G
Sbjct: 477 IGVAVIGILWMLLPGSLGVGFFSGFPARWLGVIAVLPVFLVKPPQPKTGELWLTVLDVGQ 536
Query: 231 LVALVDKNT-LISNYSNPPSF 250
+A+V + + P F
Sbjct: 537 GLAVVARTEHHALLFDTGPGF 557
Score = 39.8 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 33/230 (14%), Positives = 64/230 (27%), Gaps = 20/230 (8%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
L P G P DF + + I AIGY +
Sbjct: 142 VGERWRLTVHLKRPHGNQNPHGSDFERWALERNIRAIGYVRVSSDNQRLYPMVQHPAY-W 200
Query: 73 ISSIKQSFLNEIRANIGTYGSASAS-IFLIKHFHCIP--VYGLIA-----NILAIPILSF 124
I+ I++ + A++ + IP + + +++AI L
Sbjct: 201 IAHIREGIQHRFAASLANQAYVGILQTLATGDQNAIPRDQWRVFTRTGTNHLMAISGLHI 260
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+I + A++ + + + I +A I G +
Sbjct: 261 TMISSLAFAVVYWLWRWNTYL--TLRLPARRIAAMAGLIVALGYAVLSGFAIPAQRAFYM 318
Query: 185 VEFLLMVFCKTN---------IRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + +V G I++ I+ F SF +I
Sbjct: 319 LAVVAIVLWIGRQSSVTTVLAWALFGVILLDPWAILAPGFWLSFGAIAVI 368
>gi|256829585|ref|YP_003158313.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfomicrobium baculatum DSM 4028]
gi|256578761|gb|ACU89897.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfomicrobium baculatum DSM 4028]
Length = 804
Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/268 (11%), Positives = 80/268 (29%), Gaps = 29/268 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L I + P + + +S P D + + + F + +
Sbjct: 318 LFIGSRSHPQDSLFVAMAVLVVSDPGSV-----HDLSLQLSVLAVGGLVLFMPAVAALLA 372
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
W+ + + + + I +F + + + N+L +P+
Sbjct: 373 PLRERGALWRPVHGL------LTLLAVTCCANLFILPIQILYFSEVTAHLWL-NLLWLPV 425
Query: 122 LSFVVIPAGLIAI---LLMILSLDNIPFGVMAWGLDI------IIHIAHRISVAHNEFCI 172
LS V+P + + L + AW +D ++ A R++
Sbjct: 426 LSLAVLPLSFLGLAASLCCPFLAEGCFIAA-AWCVDALDRFLVLLDGAGRLAATPVLRPA 484
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP-----DLLISE 227
G V +V +L+ + R + + +G+ ++ + P ++ + +
Sbjct: 485 GVQVAGYAVVLVAGSVLLTAKRPRTRELFCLGVGLVLLAAPSMWQEVRPWRDEVEMTVLD 544
Query: 228 KG--NLVALVDKNTLISNYSNPPSFIFS 253
G V + + +
Sbjct: 545 TGMSQAVYVRGRTGRTVLVDGGGGWSVD 572
>gi|331651933|ref|ZP_08352952.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli M718]
gi|331050211|gb|EGI22269.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli M718]
Length = 780
Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 75/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 325 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 373
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 374 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 427
Query: 126 VIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ + L L+ + + L ++ + +
Sbjct: 428 TVPLILAAMVVHLSVPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 484
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 485 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 523
>gi|148263942|ref|YP_001230648.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter uraniireducens Rf4]
gi|146397442|gb|ABQ26075.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter uraniireducens Rf4]
Length = 797
Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 73/217 (33%), Gaps = 20/217 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ +P + + P+ LFD +F + + I + + ++
Sbjct: 325 LILEREVEPVSSLLLAAMVILALSPAA-----LFDISFQLSFLALWGILILTPLFMVPFT 379
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ S+ + + + + +FH + GLI+N + +P+
Sbjct: 380 AVSNALLR-----------KLLLFFMASFAATIATLFPVAYYFHRVSFTGLISNFVVVPL 428
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA--HRISVAH--NEFCIGRIPE 177
+ + + G A+ L+ ++ ++A + I A ++ +
Sbjct: 429 MGYGAVVLGFSALPLISVAPFLARLLLVAAAFLVKISNAFIQFLARIPSLPLLNPTPLDL 488
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
F ++V + +T + GS + L
Sbjct: 489 FLFYLVLVVLTFVSGKRTRLVLCGSFLAVSVANALLA 525
>gi|331676701|ref|ZP_08377397.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H591]
gi|331075390|gb|EGI46688.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H591]
Length = 780
Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 325 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 373
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 374 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 427
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 428 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 484
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 485 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 523
>gi|309787784|ref|ZP_07682394.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
dysenteriae 1617]
gi|308924183|gb|EFP69680.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
dysenteriae 1617]
Length = 754
Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLAGRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|161950089|ref|YP_403913.2| hypothetical protein SDY_2345 [Shigella dysenteriae Sd197]
Length = 754
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLAGRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|284801869|ref|YP_003413734.1| hypothetical protein LM5578_1624 [Listeria monocytogenes 08-5578]
gi|284995011|ref|YP_003416779.1| hypothetical protein LM5923_1576 [Listeria monocytogenes 08-5923]
gi|284057431|gb|ADB68372.1| hypothetical protein LM5578_1624 [Listeria monocytogenes 08-5578]
gi|284060478|gb|ADB71417.1| hypothetical protein LM5923_1576 [Listeria monocytogenes 08-5923]
Length = 740
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P ++ ++T + +Q +I
Sbjct: 289 WSSFSAICLSFILFFLLQPYVMKEVGFQLSYTVSFGIILSSRQILAQQQNAFTKSLSISF 348
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S+ ++ HF+ G+ N++ +PI + +++P L +L S + + P V
Sbjct: 349 ISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHFPEVV 408
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ + + ++ + + + ++ + P
Sbjct: 409 LTFFIQLVEKLTYIFAKIPHQTIVTGRP 436
>gi|254827770|ref|ZP_05232457.1| comEC [Listeria monocytogenes FSL N3-165]
gi|258600150|gb|EEW13475.1| comEC [Listeria monocytogenes FSL N3-165]
Length = 740
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P ++ ++T + +Q +I
Sbjct: 289 WSSFSAICLSFILFFLLQPYVMKEVGFQLSYTVSFGIILSSRQILAQQQNAFTKSLSISF 348
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S+ ++ HF+ G+ N++ +PI + +++P L +L S + + P V
Sbjct: 349 ISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHFPEVV 408
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ + + ++ + + + ++ + P
Sbjct: 409 LTFFIQLVEKLTYIFAKIPHQTIVTGRP 436
>gi|16803522|ref|NP_465007.1| hypothetical protein lmo1482 [Listeria monocytogenes EGD-e]
gi|224501578|ref|ZP_03669885.1| hypothetical protein LmonFR_03507 [Listeria monocytogenes FSL
R2-561]
gi|16410911|emb|CAC99560.1| comEC [Listeria monocytogenes EGD-e]
Length = 740
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P ++ ++T + +Q +I
Sbjct: 289 WSSFSAICLSFILFFLLQPYVMKEVGFQLSYTVSFGIILSSRQILAQQQNAFTKSLSISF 348
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S+ ++ HF+ G+ N++ +PI + +++P L +L S + + P V
Sbjct: 349 ISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHFPEVV 408
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ + + ++ + + + ++ + P
Sbjct: 409 LTFFIQLVEKLTYIFAKIPHQTIVTGRP 436
>gi|47095435|ref|ZP_00233045.1| comE operon protein 3, putative [Listeria monocytogenes str. 1/2a
F6854]
gi|254829759|ref|ZP_05234414.1| hypothetical protein Lmon1_00320 [Listeria monocytogenes 10403S]
gi|254898352|ref|ZP_05258276.1| hypothetical protein LmonJ_01015 [Listeria monocytogenes J0161]
gi|254912156|ref|ZP_05262168.1| comEC [Listeria monocytogenes J2818]
gi|254936484|ref|ZP_05268181.1| comEC [Listeria monocytogenes F6900]
gi|47016256|gb|EAL07179.1| comE operon protein 3, putative [Listeria monocytogenes str. 1/2a
F6854]
gi|258609077|gb|EEW21685.1| comEC [Listeria monocytogenes F6900]
gi|293590128|gb|EFF98462.1| comEC [Listeria monocytogenes J2818]
Length = 740
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P ++ ++T + +Q +I
Sbjct: 289 WSSFSAICLSFILFFLLQPYVMKEVGFQLSYTVSFGIILSSRQILAQQQNAFTKSLSISF 348
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S+ ++ HF+ G+ N++ +PI + +++P L +L S + + P V
Sbjct: 349 ISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHFPEVV 408
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ + + ++ + + + ++ + P
Sbjct: 409 LTFFIQLVEKLTYIFAKIPHQTIVTGRP 436
>gi|228910162|ref|ZP_04073981.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis IBL 200]
gi|228849445|gb|EEM94280.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis IBL 200]
Length = 659
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 17/148 (11%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASIAGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL 139
+ N+L +P LS +V+P +I +L M +
Sbjct: 268 IFLNLLYVPFLSIIVLPCSIIILLCMPI 295
>gi|77360603|ref|YP_340178.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoalteromonas haloplanktis TAC125]
gi|76875514|emb|CAI86735.1| putative DNA internalization-related competence protein ComEC/Rec2
with Metallo-beta-lactamase superfamily domain
[Pseudoalteromonas haloplanktis TAC125]
Length = 755
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 89/241 (36%), Gaps = 24/241 (9%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + + + P PGL+ F+F ++ + F I K+ + S
Sbjct: 325 WRSILYALVLVLMINPFNVLNPGLY-FSF------LAVVIIFIVITKVPFKGASVIA--- 374
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ I + F+ + + GL+ N++AIP+L+F+++P
Sbjct: 375 ----------KVGMLCAIQGALFIGLLPLSLYFFNGVSLAGLVLNLIAIPLLAFIIMPLL 424
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL-L 189
L+ +L + ++ + ++ + ++ + + + ++ ++ +
Sbjct: 425 LVVAILSSILDMSLIVSLFDP---VLYFLYQQLMAIPPGWRWFNVGTITLDIVMFSYVTM 481
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
++ + + I + + ++ + S + L+ L++K+ Y PS
Sbjct: 482 LLLYLVKFKWLACIPLSVLLVDSYFTSKSDWQVNIFDVGHGLMVLLEKDNNALIYDFGPS 541
Query: 250 F 250
+
Sbjct: 542 Y 542
>gi|291485007|dbj|BAI86082.1| putative integral membrane protein [Bacillus subtilis subsp. natto
BEST195]
Length = 767
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 73/249 (29%), Gaps = 27/249 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ + + I L F F +F+
Sbjct: 292 RVHSATAI--CLSYIVLLLFNPYHLFEAGFQLSFA---------------------VSFS 328
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ +K S + + L+ HFH + + N+L +P +F
Sbjct: 329 LILSSSIFHQVKTSLGQ--LTIVSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFC 386
Query: 126 VIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++P + +LL+ L S + F + + I+ + P + +
Sbjct: 387 ILPGAVAGVLLLSLSVSFGRLFFSWFDLLISWTNRLITNIADVEVFTIMIAHPAPVLLFL 446
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
++++ R + +M+ I F P L + +++ + +++
Sbjct: 447 FTVTIILLLMAIEKRSLSQLMVTGGICCTVMFLLFIYPCLSSEGEVDMIDIGQGDSMFVG 506
Query: 244 YSNPPSFIF 252
+ +
Sbjct: 507 APHQRGRVL 515
>gi|290893843|ref|ZP_06556821.1| comEC [Listeria monocytogenes FSL J2-071]
gi|290556560|gb|EFD90096.1| comEC [Listeria monocytogenes FSL J2-071]
Length = 719
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 59/148 (39%), Gaps = 11/148 (7%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F S P ++ ++ + KQ I
Sbjct: 268 WSSFSAICLSFILFFLSQPYVVKEVGFQLSYAVSFGIILSSRQILTKQQNAFTKSLAISF 327
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S+ ++ HF+ G+ N++ +PI + +++P L +L S + + P V
Sbjct: 328 ISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSTEIFHFPEAV 387
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ + + ++ + + S ++ + P
Sbjct: 388 LTFFIQLVEKLTYIFSNIPHQTIVTGRP 415
>gi|167630486|ref|YP_001680985.1| DNA internalization-related competence protein comec/rec2
[Heliobacterium modesticaldum Ice1]
gi|167593226|gb|ABZ84974.1| DNA internalization-related competence protein comec/rec2
[Heliobacterium modesticaldum Ice1]
Length = 881
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 83/249 (33%), Gaps = 32/249 (12%)
Query: 36 DFNFSSYYKGISAIGYFYS-IPKMIYSSESHNTWTWKKISSIKQSFLNEI---------- 84
D F + I Y + + + + + + ++ + +
Sbjct: 373 DPGFQLSFAATWGILYLFPTLHRALQPANERLVRSLERRLDVPLTIAGSFVRSGIRLISD 432
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+ + S + +F+ + GL+AN+ I++ V I + +LL I S +
Sbjct: 433 ALLVSLAAQLAVSPLGLYYFNLFSIVGLLANLAGGAIIALVTILGFVSFLLLPIWSTGAL 492
Query: 145 PFGVM-AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK----TNIRH 199
F ++ A + ++ H ++ P + + +L+++F + ++R
Sbjct: 493 SFTLVSAAAVSLLNTFLHSLAGLPGAALTVATPSP--LLLTAYYLVLIFFRESLTGHLRP 550
Query: 200 --------IGSIMIGITIIILFTFPYSFSPDLLIS------EKGNLVALVDKNTLISNYS 245
+ + I+ F +L I+ G L+ ++ +
Sbjct: 551 KTAAYIQDWSVRLAPVLFILFLAFRLLAPEELRITFMDVGQGDGILIETPGGKKVLVDTP 610
Query: 246 NPPSFIFSQ 254
PP FI
Sbjct: 611 GPPLFILRN 619
>gi|324117222|gb|EGC11130.1| competence protein [Escherichia coli E1167]
Length = 754
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLSAMCVAVGLLMCWPLWQKPRPD 497
>gi|301155975|emb|CBW15445.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1]
Length = 790
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 18/191 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ Y P + P P +F ++ + +Y Y S
Sbjct: 300 RRYYTPLQMLCLVVAFLLFCDPLMPLS-----VSFWLSVGAVTCLIVWYR-----YVPLS 349
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W +K+S + L +G + + F+ + + G +AN++A+P+ SF
Sbjct: 350 IIEWQHQKLSGKVRWILGLFHLQLGLL--ILFTPIQLFFFNGLALNGFLANLIAVPLYSF 407
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V++P L A+L +A G+ +S + I + +T +
Sbjct: 408 VLVPLILFAMLTNGAFSSWHFSNAIAQGIT------QCLSFFQGSYMPISINLSLILTAL 461
Query: 185 VEFLLMVFCKT 195
+ F+ V
Sbjct: 462 LSFVFGVMLGG 472
>gi|229180603|ref|ZP_04307944.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 172560W]
gi|228602846|gb|EEK60326.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 172560W]
Length = 659
Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 19/164 (11%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLESSNGIIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGL 153
++ N+L +P LS +V+P +I +L M + L V++ GL
Sbjct: 268 ILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGL 311
>gi|148825659|ref|YP_001290412.1| DNA mismatch repair protein [Haemophilus influenzae PittEE]
gi|148715819|gb|ABQ98029.1| DNA mismatch repair protein [Haemophilus influenzae PittEE]
Length = 719
Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P T + G P P +F + + + +Y Y
Sbjct: 232 MRRHYSPLQLFTVVVGFLLFCNPLMPLS-----VSFWLSCEAVGCLILWYR-----YVPF 281
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + S + L+ G + + F+ + + G +AN++A+PI S
Sbjct: 282 SLFQWKNRPFSPKVRWILSLFHLQFGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 339
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT- 182
F+++P L A+ +A G +I + + F+T
Sbjct: 340 FLLVPLILFAVFTNGTMFFWQLANKLAEGSTGLISV------FQGNWLTVSFNLALFLTA 393
Query: 183 IVVEFLLMVFCK 194
+ +++ +
Sbjct: 394 LCAGIFMLIIWR 405
>gi|325280502|ref|YP_004253044.1| ComEC/Rec2-related protein [Odoribacter splanchnicus DSM 20712]
gi|324312311|gb|ADY32864.1| ComEC/Rec2-related protein [Odoribacter splanchnicus DSM 20712]
Length = 622
Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 62/210 (29%), Gaps = 23/210 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ Y P + + PS L+ +F Y + I Y +Y
Sbjct: 271 RSYTPLNSVAAAAFLTLSFHPSN-----LYSLSFLLSYSAYTGILTIYP---FLYRFAGK 322
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
KI + I +FH I + G +AN++A+P+ +F+
Sbjct: 323 LPLFPAKIYA---------CCCITIAAQLPTLPISAYYFHTINLNGFLANLVAVPLATFL 373
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ A L L++ L + II+ H + + + +
Sbjct: 374 LYAAMLC--LILPFLLSQYLAWIPEVTEKIIMGFLHIFAPYSFNLHHLYPSVPTVLLSYI 431
Query: 186 EFLLMVFCKT----NIRHIGSIMIGITIII 211
+ + T R + I +
Sbjct: 432 SLIFLYLYFTKPGKKWRRYSMFTLFILLCW 461
>gi|325578732|ref|ZP_08148779.1| competence protein EC [Haemophilus parainfluenzae ATCC 33392]
gi|325159556|gb|EGC71688.1| competence protein EC [Haemophilus parainfluenzae ATCC 33392]
Length = 800
Score = 67.1 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 64/191 (33%), Gaps = 18/191 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ Y P + P P +F ++ + +Y Y S
Sbjct: 310 RRYYTPSKMLCLVVAFLLFCDPLMPLS-----VSFWLSVGAVTCLIVWYR-----YVPLS 359
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W +K+S + L +G + + F+ + G +AN++A+P+ SF
Sbjct: 360 IIEWQHQKLSRKVRWILGLFHLQLGLL--ILFTPIQLFFFNGFALNGFLANLIAVPLYSF 417
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+++P L A+L +A G+ +S+ + I + +T +
Sbjct: 418 LLVPLILFAVLTNGAFSSWHLSNTIAQGIT------QFLSIFQGSYVPISINLSLILTAL 471
Query: 185 VEFLLMVFCKT 195
+ +
Sbjct: 472 LSLVFGGMLYG 482
>gi|304397073|ref|ZP_07378952.1| DNA internalization-related competence protein ComEC/Rec2 [Pantoea
sp. aB]
gi|304355222|gb|EFM19590.1| DNA internalization-related competence protein ComEC/Rec2 [Pantoea
sp. aB]
Length = 751
Score = 67.1 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 58/183 (31%), Gaps = 19/183 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + +Y + W + ++
Sbjct: 328 SFWLSVLAVGMLLVWYHWFPLPARFRHQKRWIPVLLLHLQVGM------------MILMV 375
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F+ I + L+AN++AIP++SF+ +P A+LL I + +G + +
Sbjct: 376 PLQVAIFNGISLTALLANLVAIPVISFITMPLITFALLLPIAPVSGFFWGAADLSVRALF 435
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
H +++ + T F +V L + + + + + +
Sbjct: 436 ---HCLALLPPGWW-PLSGTTWFTIMVWGSL--ILWRAQF-FFSLPLSSFVLALAMIWSR 488
Query: 218 SFS 220
Sbjct: 489 QSH 491
>gi|229192538|ref|ZP_04319499.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 10876]
gi|228590845|gb|EEK48703.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 10876]
Length = 659
Score = 67.1 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 156 LYMVLAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 213
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 214 QFSFVGSFALLLSAPLLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 267
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ N+L +P LS +V+P +I +L M + L V++ GL +
Sbjct: 268 SLLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNDFLSYCESLPFT 327
Query: 170 FCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
I + V + + +++ +
Sbjct: 328 QLIFGETPFNLVAVYCASIVSILMVWERRA 357
>gi|217964372|ref|YP_002350050.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
monocytogenes HCC23]
gi|217333642|gb|ACK39436.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
monocytogenes HCC23]
Length = 719
Score = 67.1 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/234 (13%), Positives = 86/234 (36%), Gaps = 16/234 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P ++ ++ + KQ I
Sbjct: 268 WSSFSAICLSFILFFLLQPYVVKEVGFQLSYAVSFGIILSSRQILTKQQNAFTKSLAISF 327
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S+ ++ HF+ G+ N++ +PI + +++P L +L + + P V
Sbjct: 328 ISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFPTEIFHFPEVV 387
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + ++ + + + ++ + P T + +++ ++ F + G +
Sbjct: 388 LTFFIQLVEKLTYIFAKIPHQTIVTGRPNTVILVLIIITIIFFFSQWQKKKFPFGIFICF 447
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ L +F +S + +G+ + + ++ + + F W
Sbjct: 448 CFLCYLASFNFSGKVSFIDVGQGDSILIQLPYNQGNYLIDTGGQLPFEKEAWAK 501
>gi|228993068|ref|ZP_04152991.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
pseudomycoides DSM 12442]
gi|228766716|gb|EEM15356.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
pseudomycoides DSM 12442]
Length = 774
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 66/221 (29%), Gaps = 11/221 (4%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY----FYSIPKMIYSSES 64
P ++ G+ L D + + + Y + I S
Sbjct: 279 SPSVMRASVTGVMLLLALMHSIRVSSLD---ALSMTAVLMLLYNPYMAFDIGFQFSFVGS 335
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ L + + +++ L+ HF Y + N+L +P+LS
Sbjct: 336 FALLLSASRLLRHDNGLIQNTIYLSVISQLASTPILLYHFGYFSPYSIFLNLLYVPLLSC 395
Query: 125 VVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFV 181
VV+P ++ ++ + +++ L I I F G+ P V
Sbjct: 396 VVLPCSIVIFACILFVPFVAKWLAQMLSVCLTISNDILQYCENLPFLRFTFGQTPLFLIV 455
Query: 182 TIVVEFL-LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + + + +R + + + F Y
Sbjct: 456 LYCFSIVSIFIVWERVVRKKFLFLTVGFFLFICIFHYISPY 496
>gi|237719191|ref|ZP_04549672.1| competence protein [Bacteroides sp. 2_2_4]
gi|229451570|gb|EEO57361.1| competence protein [Bacteroides sp. 2_2_4]
Length = 638
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 61/190 (32%), Gaps = 21/190 (11%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++ + P+ LFD F + +++I + +
Sbjct: 270 MVGRQPLSLNTLAAAAWLMLFCNPAW-----LFDVGFQLSFLAVASILLIQKPIYHLITV 324
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ I + I ++ + ++ +F V+ L+ N++ IP +
Sbjct: 325 KG----------RIGKYIWGLI--SVSVAAQIGTAPLVMFYFSRFSVHFLLTNLVVIPFI 372
Query: 123 SFVVIPAGLIAILLMILSLDNIPFG-VMAWGLDIIIHIAHRISVAHNEFCIGRI--PETS 179
+ ++ A +I +LL LS I + L+ + + G
Sbjct: 373 TIILY-AAVIMLLLTPLSWLQIVVAEGVKKLLEGLNFFVRWVEQLPYASIDGIWLYQSEI 431
Query: 180 FVTIVVEFLL 189
+V FLL
Sbjct: 432 LGIYIVGFLL 441
>gi|323190733|gb|EFZ76002.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli RN587/1]
Length = 754
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSVAAVAALIFWYQWFPCPA----- 348
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 349 ----WQLPPVLRAVVS---LMHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVAHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 497
>gi|99034213|ref|ZP_01314285.1| hypothetical protein Wendoof_01000920 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 492
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 18/119 (15%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +KY A + P PG F +FS+ +++
Sbjct: 392 IMIERKYRGLIAIAFAASVILSVEPEAILKPG-FQMSFSAVLALVASYQI---------- 440
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
K+ IK S + + I +F+ + G+I N++AIP
Sbjct: 441 -------NANKLFKIKIMKYFVSIMISSVIASLATVPYTIYNFNYFSISGIITNLVAIP 492
>gi|73854947|gb|AAZ87654.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 780
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 325 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 373
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 374 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 427
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 428 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 484
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 485 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 523
>gi|307571063|emb|CAR84242.1| DNA internalization-related competence protein, putative [Listeria
monocytogenes L99]
Length = 732
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/234 (13%), Positives = 86/234 (36%), Gaps = 16/234 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P ++ ++ + KQ I
Sbjct: 281 WSSFSAICLSFILFFLLQPYVVKEVGFQLSYAVSFGIILSSRQILTKQQNAFTKSLAISF 340
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S+ ++ HF+ G+ N++ +PI + +++P L +L + + P V
Sbjct: 341 ISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFPTEIFHFPEVV 400
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + ++ + + + ++ + P T + +++ ++ F + G +
Sbjct: 401 LTFFIQLVEKLTYIFAKIPHQTIVTGRPNTVILVLIIITIIFFFSQWQKKKFPFGIFICF 460
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ L +F +S + +G+ + + ++ + + F W
Sbjct: 461 CFLCYLASFNFSGKVSFIDVGQGDRILIQLPYNQGNYLIDTGGQLPFEKEAWAK 514
>gi|220932129|ref|YP_002509037.1| DNA internalization-related competence protein ComEC/Rec2
[Halothermothrix orenii H 168]
gi|219993439|gb|ACL70042.1| DNA internalization-related competence protein ComEC/Rec2
[Halothermothrix orenii H 168]
Length = 775
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 87/237 (36%), Gaps = 23/237 (9%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
GI L P F DF F+ G++AI P ++ T+ +
Sbjct: 299 AGILSLVFLWAPYFNREADF-FN--TLGLAAILNLVINPLSLFMVGFQLTYLVLIFIILW 355
Query: 78 QSFLNEI---RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGL 131
L + + +S + +F+ I G++ NI AIP+ VV + +
Sbjct: 356 SGILKKYLGNIVAVSGAALLGSSPIISYYFNIITPIGILTNIWAIPLAGLVVSMSMIGLI 415
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM- 190
+ ++ + SL I + + L ++ +++ + + + P + I + +
Sbjct: 416 LGLVHPVFSL-VIFRLFVYYLLRLLGTGMKFMALLPFDIEVPQPPLFILLAIYSVLIYLP 474
Query: 191 VFCKTN------------IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
KT ++ G ++ + ++++ + +++ + G A++
Sbjct: 475 FLLKTRYIPYNIKRQKMKLKWAGVLVTCLIVMMVLMGIFPSQLEIIFFDVGQGDAII 531
>gi|312969021|ref|ZP_07783228.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 2362-75]
gi|312286423|gb|EFR14336.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 2362-75]
Length = 754
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGVWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|260867085|ref|YP_003233487.1| hypothetical protein ECO111_0981 [Escherichia coli O111:H- str.
11128]
gi|257763441|dbj|BAI34936.1| conserved predicted inner membrane protein [Escherichia coli
O111:H- str. 11128]
Length = 754
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|323175464|gb|EFZ61059.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 1180]
Length = 624
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 169 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 217
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 218 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 271
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 272 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 328
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 329 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 367
>gi|331641439|ref|ZP_08342574.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H736]
gi|331038237|gb|EGI10457.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H736]
Length = 780
Score = 66.7 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 325 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 373
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 374 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 427
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 428 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAECWQWLSF 484
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 485 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 523
>gi|107028709|ref|YP_625804.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia AU 1054]
gi|116690132|ref|YP_835755.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia HI2424]
gi|105897873|gb|ABF80831.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia AU 1054]
gi|116648221|gb|ABK08862.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia HI2424]
Length = 829
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 71/247 (28%), Gaps = 18/247 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ G L+ P G F + ++ I + + + +
Sbjct: 345 RSVPTSAVLCAALGGVLLADPWAVLSAG-----FWLSFGAVAVILLAVAGWRAVREVDDI 399
Query: 66 NTWTWK----------KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
+ + + + + + + + F + + G N
Sbjct: 400 DEAGAEGGMTGLRSRLRGWATRGRHRLAEATRVQYAVTIGLAPLTAAWFAQVSLSGPFGN 459
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
AIP +S VV P L I L LD F + L ++ + ++ R+
Sbjct: 460 AFAIPWVSSVVTPVVLAGIAL-PPPLDAAAFRLAHAALAPMMTLLGHLADWPAGVFWLRM 518
Query: 176 PETSFVTIV-VEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
P+ + + V + + +R + + P + + + G A
Sbjct: 519 PDWPVLALACVGVAWALMPRGWPLRWAAPLTWLPLVAPAPDAPPPGGFRMTVLDVGQGAA 578
Query: 234 LVDKNTL 240
++ +
Sbjct: 579 VLVETAR 585
>gi|300113155|ref|YP_003759730.1| DNA internalization-like competence protein ComEC/Rec2
[Nitrosococcus watsonii C-113]
gi|299539092|gb|ADJ27409.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus watsonii C-113]
Length = 784
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 70/201 (34%), Gaps = 15/201 (7%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY-SIPKMIYSS 62
+ + P + + P PG F + ++ + + + ++
Sbjct: 320 VKRPVHPLRTLAFALILVLIWDPLSALAPG-----FWLSFGAVAVLMMGMTGLRPLPHAK 374
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + + + + + + FL+ +F + + + N++A+P +
Sbjct: 375 TLGFSIVPYYLGHLWRQWGKA-----QWIVAIGLAPFLLYYFQRLSLIAPVTNLVAVPWM 429
Query: 123 SFVVI-PAGLIAILLMILSLDNIPFGVMAWGLDIIIH-IAHRISVAHNE-FCIGRIPETS 179
F+V+ P L A+LL+ L ++ L ++ + + + P
Sbjct: 430 GFLVVPPLLLGALLLIPFPLLGKALINLSDYLLALLWSVLVWCAEPPAAQWEHTSPPLWL 489
Query: 180 FVTIVVEFLLMVFCKT-NIRH 199
F+ ++ LL++ + R
Sbjct: 490 FLPAILGSLLLLAPRGLPGRW 510
>gi|157155375|ref|YP_001462131.1| hypothetical protein EcE24377A_1011 [Escherichia coli E24377A]
gi|191167003|ref|ZP_03028826.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli B7A]
gi|260854204|ref|YP_003228095.1| hypothetical protein ECO26_1039 [Escherichia coli O26:H11 str.
11368]
gi|300925409|ref|ZP_07141294.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 182-1]
gi|301326624|ref|ZP_07219957.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 78-1]
gi|157077405|gb|ABV17113.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E24377A]
gi|190902997|gb|EDV62723.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli B7A]
gi|257752853|dbj|BAI24355.1| conserved predicted inner membrane protein [Escherichia coli
O26:H11 str. 11368]
gi|300418479|gb|EFK01790.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 182-1]
gi|300846707|gb|EFK74467.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 78-1]
gi|323157200|gb|EFZ43323.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli EPECa14]
gi|323174986|gb|EFZ60601.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli LT-68]
Length = 754
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|218694386|ref|YP_002402053.1| hypothetical protein EC55989_0958 [Escherichia coli 55989]
gi|218351118|emb|CAU96822.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
Length = 754
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|187478043|ref|YP_786067.1| competence protein [Bordetella avium 197N]
gi|115422629|emb|CAJ49154.1| putative competence protein [Bordetella avium 197N]
Length = 755
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 70/248 (28%), Gaps = 20/248 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + + P PG F + ++ + +++ + S + W
Sbjct: 280 PGAILSVAAALVVVLDPWALTTPG-----FWLSFGAVAILM------RVVLTQRSGSRWQ 328
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + L + + +AN LAIP +S V P
Sbjct: 329 -------RWRMAVWDFCRTQMAVTLGLMPLLAFWVGEVSLVSPLANALAIPWVSLWVTPL 381
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFL 188
L+ L+ L G+ ++ ++ + P ++
Sbjct: 382 ALLTGALVWLPGAAWLGGLAHESFAGLMWGLSWLAAWRWASLPVAAAPIYLLGLALMGVA 441
Query: 189 LMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+ + R +G + I ++ P L + G A+V + +
Sbjct: 442 WALQGRGWPSRWVGWVCIVPMLVWRPERPPEGGWRLAALDVGQGTAVVVETARHVLLYDT 501
Query: 248 PSFIFSQW 255
+ W
Sbjct: 502 GPRHYRSW 509
>gi|215486038|ref|YP_002328469.1| hypothetical protein E2348C_0906 [Escherichia coli O127:H6 str.
E2348/69]
gi|215264110|emb|CAS08454.1| conserved inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
Length = 754
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGVWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|331672451|ref|ZP_08373241.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA280]
gi|331070357|gb|EGI41722.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA280]
Length = 780
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 325 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 373
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 374 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 427
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A++ L L+ + + L ++ + +
Sbjct: 428 TVPLILAAMVAHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 484
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 485 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 523
>gi|300816983|ref|ZP_07097202.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 107-1]
gi|300823653|ref|ZP_07103780.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 119-7]
gi|307311700|ref|ZP_07591340.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli W]
gi|331667290|ref|ZP_08368155.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA271]
gi|300523853|gb|EFK44922.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 119-7]
gi|300530335|gb|EFK51397.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 107-1]
gi|306908255|gb|EFN38754.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli W]
gi|315060198|gb|ADT74525.1| conserved inner membrane protein [Escherichia coli W]
gi|320202309|gb|EFW76880.1| hypothetical protein ECoL_00355 [Escherichia coli EC4100B]
gi|323379242|gb|ADX51510.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli KO11]
gi|331065646|gb|EGI37539.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA271]
Length = 754
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|117923910|ref|YP_864527.1| DNA internalization-related competence protein ComEC/Rec2
[Magnetococcus sp. MC-1]
gi|117607666|gb|ABK43121.1| DNA internalization-related competence protein ComEC/Rec2
[Magnetococcus sp. MC-1]
Length = 815
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 75/211 (35%), Gaps = 6/211 (2%)
Query: 34 LFDFNFSSYYKGISAIG--YFYSIPKMIYSSESHNTWTWKKISSIKQSF--LNEIRANIG 89
LF F + + + + + P++ + + + S+ A
Sbjct: 355 LFGAGFQLSFLCVVVLLGVFSPAAPELAGVMQRAWSPPEPQSSNRWHRLLKGGLESAKAS 414
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFG 147
+ FH + +YG+ N+L IP + F+V+P GL+A++L L L
Sbjct: 415 LLLGLVTGPLVAGVFHRVALYGVGLNLLVIPWVGFLVVPVGLLAVVLYPLVPPLAGWLLQ 474
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+ W L + + ++ + + V + + F + R ++ +
Sbjct: 475 LTGWLLWPVQELVSWVNTLPGAWWRVAGQGDDLLWAYVLVVGLAFMQRAYRGPLLLLALL 534
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
+ + ++ + E G A+V ++
Sbjct: 535 LASWPQSATPPTTLEVTVLEVGQAQAVVVRD 565
Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 52/190 (27%), Gaps = 13/190 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES--HNTWTWK 71
T + A+L G PG FD+ +G+ G+ + N + W+
Sbjct: 151 GTRLRLHAKLRTTQGLRVPGGFDYGLWLRRQGVVMTGHSSHPVVALADGGGYAWNRFRWQ 210
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
I + A + V GL +++AI L ++ AGL
Sbjct: 211 VSQWIATTLPGATGAVAQALLVGMRDAMALPLQEQWQVAGLY-HLVAISGLHVGLVAAGL 269
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF----VTIVVEF 187
+ + + W + + G + ++
Sbjct: 270 FQL------WRWLLSRRLRWVARWDLKPWAALLSLPGVLAYGFLAGWGVSTQRAVVMAVV 323
Query: 188 LLMVFCKTNI 197
LL+
Sbjct: 324 LLLALGSGRW 333
>gi|26107339|gb|AAN79522.1|AE016758_126 Hypothetical protein ycaI [Escherichia coli CFT073]
Length = 764
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 309 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 357
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 358 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 411
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 412 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 468
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 469 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 507
>gi|239827787|ref|YP_002950411.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. WCH70]
gi|239808080|gb|ACS25145.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. WCH70]
Length = 759
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 69/215 (32%), Gaps = 26/215 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
K P A + + L P L+D F + A+ + S
Sbjct: 297 KSKLSPLDALSITLVMMLLFDPY-----MLWDVGFQLSFIVTFALILSSQMIL------S 345
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
H++ W+ SA FL+ +F + ++ + NI+ +P+ SF
Sbjct: 346 HDSVFWRLFF-------------TAFIAQLSALPFLLYYFFEVSLWSIPLNIIFVPLYSF 392
Query: 125 VVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
++P A+ + L ++ + I + S H+ + P F+
Sbjct: 393 AIMPLSFAAVGTHYIHSLLSFPFIWLLQKIIVISSDVVAFFSSNHSLSLVLGRPSFFFLI 452
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ F + R SI +I L +
Sbjct: 453 CYAAAIFAAFVQMEKRRYFSIGWVAFVITLHAWSP 487
>gi|193070742|ref|ZP_03051677.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E110019]
gi|192955935|gb|EDV86403.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E110019]
Length = 754
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|331646178|ref|ZP_08347281.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli M605]
gi|331044930|gb|EGI17057.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli M605]
Length = 754
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWLCCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|300921050|ref|ZP_07137436.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 115-1]
gi|300411988|gb|EFJ95298.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 115-1]
Length = 754
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|311069160|ref|YP_003974083.1| DNA channel for uptake in competent cells [Bacillus atrophaeus
1942]
gi|310869677|gb|ADP33152.1| DNA channel for uptake in competent cells [Bacillus atrophaeus
1942]
Length = 777
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 84/272 (30%), Gaps = 50/272 (18%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ +P I L P G F +F+ S
Sbjct: 300 KRMNPSIVICLSYLILLLFNPYHLFQIG-FQLSFAV----------------------SF 336
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ I QS A + + LI +F + + NI+ +P +
Sbjct: 337 SLILSSSIFKKLQSGGLVQLAMVSLIAQLGSLPILIYYFQQFSLISIPMNIIMVPFYTMF 396
Query: 126 VIPAGLIAILLM----ILS--LDNIPFGVMAWGLDIIIHIAHR-----ISVAHNEFCIGR 174
V+P +I LL+ + L +M W +I + A I+ N +
Sbjct: 397 VMPFSMIGFLLLSLSEPVGECLFYWFDYIMCWSDKLIKYAADIEQFTVIAARPNALVL-- 454
Query: 175 IPETSFVTIVVEFLLMVFCKTNI---RHIGSIMIGITIIILFTFPYSFS---PDLLISEK 228
F I +L+ + + R + ++ + ++ FP D+L +
Sbjct: 455 -----FGLIGSIVVLLTAMEKSALYQRLLSVLLFIAMLFLVVIFPRLDPEGEVDMLDIGQ 509
Query: 229 GNLVALVDKNTL---ISNYSNPPSFIFSQWKS 257
G+ + + + + S++ W+
Sbjct: 510 GDSMFISAPYQRGHVMIDTGGILSYLTEPWRE 541
>gi|229006666|ref|ZP_04164300.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides Rock1-4]
gi|228754527|gb|EEM03938.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides Rock1-4]
Length = 774
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 66/221 (29%), Gaps = 11/221 (4%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY----FYSIPKMIYSSES 64
P ++ G+ L D + + + Y + I S
Sbjct: 279 SPSVMRASVTGVMLLLALMHSIRVSSLD---ALSMTAVLMLLYNPYMAFDIGFQFSFVGS 335
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ L + + +++ L+ HF Y + N+L +P+LS
Sbjct: 336 FALLLSASRLLQHDNGLIQNTMYLSVISQLASTPILLYHFGYFSPYSIFLNLLYVPLLSC 395
Query: 125 VVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFV 181
VV+P ++ ++ + +++ L I I F G+ P V
Sbjct: 396 VVLPCSIVIFACILFVPFVAKWLAQMLSVCLTISNDILQYCENLPFLRFTFGQTPLFLIV 455
Query: 182 TIVVEFL-LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + + + +R + + + F Y
Sbjct: 456 LYCFSIVSIFIVWERVVRKKFLFLTVGFFLFICIFHYISPY 496
>gi|293414193|ref|ZP_06656842.1| competence protein ComEC/Rec2 [Escherichia coli B185]
gi|291434251|gb|EFF07224.1| competence protein ComEC/Rec2 [Escherichia coli B185]
Length = 754
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHSSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|218553500|ref|YP_002386413.1| hypothetical protein ECIAI1_0954 [Escherichia coli IAI1]
gi|293433210|ref|ZP_06661638.1| hypothetical protein ECCG_01335 [Escherichia coli B088]
gi|218360268|emb|CAQ97818.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|291324029|gb|EFE63451.1| hypothetical protein ECCG_01335 [Escherichia coli B088]
gi|323185381|gb|EFZ70745.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 1357]
gi|323947298|gb|EGB43306.1| competence protein [Escherichia coli H120]
Length = 754
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSVWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|82703621|ref|YP_413187.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosospira multiformis ATCC 25196]
gi|82411686|gb|ABB75795.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosospira multiformis ATCC 25196]
Length = 766
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 55/211 (26%), Gaps = 28/211 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P PG F + I+ I
Sbjct: 300 LWLDRSIAMTTVLAWALLAVVALDPWAVLSPG-----FWLSFGAIAVIMLVSVGRVGRPH 354
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S T + + L+ F I + IAN +AIP+
Sbjct: 355 WLSSWT-------------------TVQWAITLGLIPLLLAMFQQISLVSPIANAVAIPL 395
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S VV+P L+A L + L LD + + +S A + P V
Sbjct: 396 VSLVVVPLALLATLPPLDFLLVPA----HAALDGCMTVMEWLSNAPQAVWSQQAPPFWAV 451
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ + + G L
Sbjct: 452 AVGTAGIFWTLLPGKWGWQLGLGTGFPARWL 482
Score = 36.7 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 79/262 (30%), Gaps = 12/262 (4%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
P A ARL P G A P DF + + I A GY + I +
Sbjct: 112 PPLNAGERWRLTARLKRPHGTANPHASDFEQWALERNIGATGYVRKDDENIRLEKVVGRP 171
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY--------GLIANILAIP 120
++ + ++Q + A + A + L + I ++++I
Sbjct: 172 AYQ-VERLRQDIRDNFLAALPYQAYAGTLVALAVGDQRAIPHEQWQVFTRTGINHLVSIS 230
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
L ++ + + + + + IA ++ G
Sbjct: 231 GLHITMLSGLVFTMAYWLWRRSYHLTLRLPARKAAV--IAGLVAALGYTLLAGFAIPAQR 288
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF-SPDLLISEKGNLVALVDKNT 239
++ + + + +++ + ++ P++ SP +S V ++
Sbjct: 289 TLYMLTAVAVTLWLDRSIAMTTVLAWALLAVVALDPWAVLSPGFWLSFGAIAVIMLVSVG 348
Query: 240 LISNYSNPPSFIFSQWKSALIT 261
+ S+ QW L
Sbjct: 349 RVGRPHWLSSWTTVQWAITLGL 370
>gi|260893332|ref|YP_003239429.1| DNA internalization-related competence protein ComEC/Rec2
[Ammonifex degensii KC4]
gi|260865473|gb|ACX52579.1| DNA internalization-related competence protein ComEC/Rec2
[Ammonifex degensii KC4]
Length = 791
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/315 (10%), Positives = 80/315 (25%), Gaps = 29/315 (9%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A L+ P L++ F + G F+ P++ + T
Sbjct: 322 ALAVAALTVLLANPLA-----LYNVGFQLSFAATW--GIFFVGPEVNRWWQDSWGKT--- 371
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+ + + H+ + L+AN+L P+++ + L+
Sbjct: 372 --KLTALIPYGWFLAVPLGAELGVLPLVAWHYGLVSPVSLLANLLTAPLITVIFAGGFLV 429
Query: 133 AIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
A+L L+ L +++ + + + + H V + +
Sbjct: 430 ALLGALLPF-LGQALAFLVSPFIHLFLFLVHLCQQLPYAAVYLSTVPLLAVIFWYPAVWL 488
Query: 191 VFCKTNIRHIGSIM------IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
R +G + + D + G+ + +
Sbjct: 489 AVRGGKWRRVGIAGLLALWFLLVLGGGGGKGAPLLRLDFIDVGHGDSIFVRTPAGKSLLV 548
Query: 245 SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVG 304
W L A L + L ++ + ++ V
Sbjct: 549 DAGG------WPEELRGEKEGAGLRVVRYLWREGVKELDVLVLTHPDEDH--CGGAWAVL 600
Query: 305 CHRSDVIVGVLKRKD 319
+V + +
Sbjct: 601 RRFPVKLVVIPPIPE 615
>gi|261491898|ref|ZP_05988476.1| putative competence protein EC [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494439|ref|ZP_05990926.1| putative competence protein EC [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309924|gb|EEY11140.1| putative competence protein EC [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312445|gb|EEY13570.1| putative competence protein EC [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 760
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 10/155 (6%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P+ I + L P +F ++++ +Y +
Sbjct: 297 LRRHYTPWQYWGRIVALLILIDPLSLLS-----DSFWLSILAVASLILWYQYFPLSRFLN 351
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
K + + S L+ + S + F I + L+AN++ +P+ S
Sbjct: 352 DEYRKKITKFNRLWLSLLH-----LQIGIWLIFSPVQLYFFEGISAFALLANLIIVPLYS 406
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F+++P L +L L + +A ++
Sbjct: 407 FLLVPLILFTLLTDNLFSTWLLADYLAQFSLWLLD 441
>gi|330910693|gb|EGH39203.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Escherichia coli AA86]
Length = 754
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWLCCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|293396769|ref|ZP_06641045.1| recombination protein 2 [Serratia odorifera DSM 4582]
gi|291421033|gb|EFE94286.1| recombination protein 2 [Serratia odorifera DSM 4582]
Length = 751
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 76/259 (29%), Gaps = 27/259 (10%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+ LS P +F ++A+ +++ + W W + +
Sbjct: 313 CLILLSDPLAILS-----DSFWLSALAVAALIFWFEWAPLPRR--FSAAWYWAPLRWLH- 364
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
I + FH + L AN+ A+PI+S + +P L A++L
Sbjct: 365 ---------IQLGMTLLLLPMQFGLFHGVSWTSLPANLWAVPIVSLLSVPLILTAVVLNN 415
Query: 139 LS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
+ L + L + + E RI V+ +L + +
Sbjct: 416 VPMLGEYLWLAANQTLVWALWPLPWL-----EQGWVRISSGLMQFSVLGWLSVAAWRFGW 470
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLL----ISEKGNLVALVDKNTLISNYSNPPSFIFS 253
+I + + L +V++N Y + +
Sbjct: 471 WRSYPTGCAALFLIFLVWRERPPEHRWRLDMLDVGHGLAVVVERNGKAIMYDSGNRWNTG 530
Query: 254 QWKSALITPFHEAPHVQKE 272
+I P+ +Q E
Sbjct: 531 SAAQRIILPYLRWRGLQLE 549
>gi|237707099|ref|ZP_04537580.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|91071588|gb|ABE06469.1| hypothetical protein YcaI [Escherichia coli UTI89]
gi|226898309|gb|EEH84568.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
Length = 764
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 309 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 357
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 358 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 411
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 412 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 468
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 469 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 507
>gi|300704510|ref|YP_003746113.1| hypothetical protein RCFBP_20314 [Ralstonia solanacearum CFBP2957]
gi|299072174|emb|CBJ43506.1| conserved membrane protein of unknown function, ComEC/Rec2 domain
[Ralstonia solanacearum CFBP2957]
Length = 845
Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/238 (11%), Positives = 63/238 (26%), Gaps = 16/238 (6%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + L P G F + ++ I +
Sbjct: 353 DRSVPASLSLCWAAAVVALVDPWAVMSAG-----FWLSFGAVAVIFLATRMAAADAGGND 407
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + A I + + F + V AN LAIP++S
Sbjct: 408 RQSTWPR-----RAWRALCGGARIQLAVTFGLLPLTLLLFQQVSVVSAAANALAIPVVSL 462
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V P LI +L ++ ++ + +
Sbjct: 463 VTTPLALIGAVL-PEPWAQPVLAWAEASFGWLVSWLDGLAAPAWSVWTAPVAPAWAWLLA 521
Query: 185 VEFLLMVFCKTN-----IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
+ + ++ R G +++ ++ P + L+ + G A + +
Sbjct: 522 IGGVPLLLAPGGHRAWAWRAQGVLLLLPMVLARAPAPPPGAFRLVAFDIGQGAAALVE 579
>gi|320184255|gb|EFW59068.1| hypothetical protein SGF_03556 [Shigella flexneri CDC 796-83]
Length = 722
Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|86143862|ref|ZP_01062230.1| competence protein [Leeuwenhoekiella blandensis MED217]
gi|85829569|gb|EAQ48032.1| competence protein [Leeuwenhoekiella blandensis MED217]
Length = 678
Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 23/182 (12%)
Query: 15 TTIEGIARLSPPSGPAFPGL-FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ L P L ++ F Y + AI + Y W
Sbjct: 338 ALLTSAVILL----VINPSLIYEVGFQLSYAAVFAIMWLYPK----------LEPLWNPK 383
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ I + + I +I + +FH P LIANI+ +P L F++I +
Sbjct: 384 NKILRYYWQLIAVSIS--AQLGVLPLSLYYFHQFPGLFLIANIVVLPALGFLLIYGLI-- 439
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN--EFCIGRIPETSFVTIVVEFLLMV 191
LLM+ + +P + ++ ++ + +S I S +++ +LL+
Sbjct: 440 -LLMLAAAGILPEFIASFYNTLLNTLNQFVSTLAQFDALLFKNI-YFSIPLVILSYLLLF 497
Query: 192 FC 193
F
Sbjct: 498 FM 499
>gi|265767013|ref|ZP_06094842.1| competence protein [Bacteroides sp. 2_1_16]
gi|263253390|gb|EEZ24866.1| competence protein [Bacteroides sp. 2_1_16]
Length = 699
Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 17/188 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI Y + + ++
Sbjct: 357 LFDVGFQLSFSAVAAILLLYPWLFR------QLPVGNSLLKKVW------ALMSVSLAAQ 404
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F P + L+ N+L IP++S + + A + ++L + F V+ L
Sbjct: 405 IGTAPLVLLYFSRFPTHFLLTNLLVIPLVSGI-MYATVALLVLTPFPMLYTGFSVVVRSL 463
Query: 154 -DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D + + + + T F L++ + + S+ I
Sbjct: 464 VDCLNTMVRWVEHLPLASIDR---VWIYPTEAFAFYLVLLIGIRYKVVRSLKCLYVFGIC 520
Query: 213 FTFPYSFS 220
SF
Sbjct: 521 ILAMGSFH 528
Score = 43.6 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 71/214 (33%), Gaps = 17/214 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + A +SPPS P FD+ YKGIS I + S I +
Sbjct: 150 LRSGDELIFFAHVSPPSNNGNPDEFDYARYLRYKGISGIAFVASGNWKITGYRFSRSCRQ 209
Query: 71 KKISSIKQSFLNEIRAN-IGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPIL 122
+ ++ L++ RA A + + + + +++LA+ L
Sbjct: 210 IALEY-RERILDQYRALKFNPDEFAVLAALTVGYKEELSEDIRETYSVSGASHVLALSGL 268
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
G + ++L+ L +P +G+ + + ++ F G P
Sbjct: 269 HI-----GFLYMMLL-FFLKWLPGNA--FGVRLFRAVVIITALWGFAFFTGLSPSVVRSV 320
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
I+ L + + + I+L P
Sbjct: 321 IMFSLLALSVLSRRTGISLNTLALTACIMLVVHP 354
>gi|153868966|ref|ZP_01998680.1| DNA internalization-related competence protein ComEC/Rec2
[Beggiatoa sp. PS]
gi|152074460|gb|EDN71312.1| DNA internalization-related competence protein ComEC/Rec2
[Beggiatoa sp. PS]
Length = 799
Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 73/222 (32%), Gaps = 21/222 (9%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSE-SHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + ++ I YF S ++ +S S K+ L I I
Sbjct: 338 GFWLSFSSVAVIVYFLSGRRVSTNSLLSQKGIATGKVHWAATLGLFPIILMIS------- 390
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLD 154
I L AN +AIP +SFVV+P L+ ++ + ++ V A+ LD
Sbjct: 391 --------GYISFSSLPANAIAIPWVSFVVVPLTLLGTAIISFLPTEGSLLLRVAAYTLD 442
Query: 155 IIIHIAHRISVAHNEFCIGRIPE-TSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIIL 212
+ IP + + +V +++ + + +G + ++
Sbjct: 443 TLWVSMIWFENVEWGVLQWTIPPFWTILVAMVGIAILLLPRGFPGKWLGIFWLLPIFLVP 502
Query: 213 FTFP-YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFS 253
F P L+ L A+V Y P F
Sbjct: 503 FPHPNQGEVWLDLLDVGQGLAAVVRTQNYTLVYDTGPKFSKK 544
>gi|254361282|ref|ZP_04977425.1| possible competence protein EC [Mannheimia haemolytica PHL213]
gi|153092778|gb|EDN73821.1| possible competence protein EC [Mannheimia haemolytica PHL213]
Length = 760
Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 10/155 (6%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y P+ I + L P +F ++++ +Y +
Sbjct: 297 LRRHYTPWQYWGRIVALLILIDPLSLLS-----DSFWLSILAVASLILWYQYFPLSRFLN 351
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
K + + S L+ + S + F I + L+AN++ +P+ S
Sbjct: 352 DEYRKKITKFNRLWLSLLH-----LQIGIWLIFSPVQLYFFEGISAFALLANLIIVPLYS 406
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F+++P L +L L + +A ++
Sbjct: 407 FLLVPLILFTLLTDNLFSTWLLADYLAQFSLWLLD 441
>gi|299148264|ref|ZP_07041326.1| competence protein [Bacteroides sp. 3_1_23]
gi|298513025|gb|EFI36912.1| competence protein [Bacteroides sp. 3_1_23]
Length = 638
Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 21/190 (11%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++ + P+ LFD F + +++I + +
Sbjct: 270 MVGRQPLSLNTLAAAAWLMLFCNPAW-----LFDVGFQLSFLAVASILLIQKPIYHLITV 324
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ I + + ++ + ++ +F V+ L+ N++ IP +
Sbjct: 325 KG----------RIGKYIWGLM--SVSVAAQIGTAPLVMFYFSRFSVHFLLTNLVVIPFI 372
Query: 123 SFVVIPAGLIAILLMILSLDNIPFG-VMAWGLDIIIHIAHRISVAHNEFCIGRI--PETS 179
+ ++ A +I +LL LS I + L+ + + G
Sbjct: 373 TIILY-AAVIMLLLTPLSWLQIVVAEGVKKLLEGLNFFVRWVEQLPYASIDGIWLYQSEI 431
Query: 180 FVTIVVEFLL 189
+V FLL
Sbjct: 432 LGIYIVGFLL 441
>gi|224369292|ref|YP_002603456.1| ComE [Desulfobacterium autotrophicum HRM2]
gi|223692009|gb|ACN15292.1| ComE [Desulfobacterium autotrophicum HRM2]
Length = 818
Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/227 (16%), Positives = 81/227 (35%), Gaps = 17/227 (7%)
Query: 31 FPG-LFDFNFSSYYKGISAIGYFYSIPKMI-YSSESHNTWTWKKISSIKQSFLNEIRANI 88
+PG LF +F + + I ++ K + +++ ++ + I + + A +
Sbjct: 351 WPGALFSISFQLSFFAVLFILGGMAVVKKLTADTDTGGSFFNRAIKRVGMFMAVSLFAIL 410
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPF 146
G ++ +F+ I G+ N++ IP F+ +P GL+A+ + L +
Sbjct: 411 G------TQPLVMHYFNQISFAGIFTNLILIPGAGFLALPLGLLALFVYPFFVGLSALLV 464
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS----FVTIVVEFLLMVFCKTNIRHIGS 202
+ + L I +S + P+ + L MVF R G
Sbjct: 465 ALAGFILGFCIDFLGWVSALSMAWSHAVTPDFVEISCYYLFCFG-LFMVFKNMKKR--GV 521
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+++ +I Y D ++ N+ L + P
Sbjct: 522 LLVVAAFVIFSAREYFLILDRFFNKNVNVFVLDVGQGSAALIEAPQG 568
>gi|150002657|ref|YP_001297401.1| competence protein [Bacteroides vulgatus ATCC 8482]
gi|149931081|gb|ABR37779.1| competence protein [Bacteroides vulgatus ATCC 8482]
Length = 650
Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 59/159 (37%), Gaps = 16/159 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I + Y + W+ + + +
Sbjct: 355 LFDTGFQLSFLAVLSILFIYPVISR----------YWRVRHPVPRYIWG--IVAVSLAAQ 402
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +I F PVY L AN++ P++ V+I + + +L ++ +I V+ GL
Sbjct: 403 LGTAPVVIYKFAYFPVYFLPANLIVAPLV-LVIIYGTVASFVLSPFTVLHI--WVV-KGL 458
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ ++ + + + + + + V L ++
Sbjct: 459 NGVLRLLNDSMQWVGDLPVSHSGDIHLSLLQVGILYVLL 497
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 66/223 (29%), Gaps = 22/223 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFN---F--SSYYKGISAIGYFYSIPKMIYSSESHNT- 67
+ R+S P PG FD+ F + GY+ K +
Sbjct: 152 GDHLNFYTRISTPEREVIPGEFDYAAYLFRQQISGTAVIFPGYWQWTGKKSALTWKQRAG 211
Query: 68 -WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W K + S ++ + + + + L + +++ILA+ + V
Sbjct: 212 VWREKILDSYRKWGFSGDEFAVLSALTVGYKEELSEDLRETYQVAGVSHILALSGMHIAV 271
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ GL+ +L L + V + +++ +
Sbjct: 272 L-WGLLCWILRPLDRSCLLRWVKCGIIVLLLWTFAFLVGLPPSVIR-------------- 316
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
++M T R G + + + + F + + G
Sbjct: 317 AVVMCMLMTAARAAGERTLSLNTLSVAAFFMLLYNPFYLFDTG 359
>gi|313205206|ref|YP_004043863.1| comec/rec2-related protein [Paludibacter propionicigenes WB4]
gi|312444522|gb|ADQ80878.1| ComEC/Rec2-related protein [Paludibacter propionicigenes WB4]
Length = 685
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 12/153 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F Y + +I +F I +Y T K + + F I A +G
Sbjct: 352 LYDVGFQLSYAAVLSIIFFQPIVDKLYQP------TNKITRMVWEIFSVSIAAQLG---- 401
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ F + +F P Y L+ N +AIP+ S V+ A + ++ I L + ++ W L
Sbjct: 402 --TTPFTLYYFQQFPSYFLLTNFIAIPLSSLVIYLAIFLFMVSSIAYLSDFVGLLLKWSL 459
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
++ H I + + + +
Sbjct: 460 WLLNHFIVWIENLPYSVWHISLDVRQTIVLFLA 492
>gi|332881904|ref|ZP_08449546.1| ComEC/Rec2-like protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680139|gb|EGJ53094.1| ComEC/Rec2-like protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 581
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 57/163 (34%), Gaps = 13/163 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F Y + +I FY W + + + + +G
Sbjct: 294 LYDVGFQLSYAAVFSILTFYP----------ITLCWWFPENKYVRYIWSLV--TVGFTAQ 341
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH + IANI+ +P+L ++I L +L + L NI + +
Sbjct: 342 IVVIPISLYYFHQFSILFFIANIVVVPLLQPILILGILCLLLASTVGLPNIVVLITEKLI 401
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
++ + I+ F I I + + I +++
Sbjct: 402 WLMNTLIRLIAEQE-FFIIRNIQFNTLMLIASLLIVITIIWWR 443
>gi|293372312|ref|ZP_06618697.1| ComEC/Rec2-like protein [Bacteroides ovatus SD CMC 3f]
gi|292632754|gb|EFF51347.1| ComEC/Rec2-like protein [Bacteroides ovatus SD CMC 3f]
Length = 647
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 21/190 (11%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++ + P+ LFD F + +++I + +
Sbjct: 279 MVGRQPLSLNTLAAAAWLMLFCNPAW-----LFDVGFQLSFLAVASILLIQKPIYHLITV 333
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ I + + ++ + ++ +F V+ L+ N++ IP +
Sbjct: 334 KG----------RIGKYIWGLM--SVSVAAQIGTAPLVMFYFSRFSVHFLLTNLVVIPFI 381
Query: 123 SFVVIPAGLIAILLMILSLDNIPFG-VMAWGLDIIIHIAHRISVAHNEFCIGRI--PETS 179
+ ++ A +I +LL LS I + L+ + + G
Sbjct: 382 TIILY-AAVIMLLLTPLSWLQIVVAEGVKKLLEGLNFFVRWVEQLPYASIDGIWLYQSEI 440
Query: 180 FVTIVVEFLL 189
+V FLL
Sbjct: 441 LGIYIVGFLL 450
>gi|293409290|ref|ZP_06652866.1| hypothetical protein ECEG_00223 [Escherichia coli B354]
gi|291469758|gb|EFF12242.1| hypothetical protein ECEG_00223 [Escherichia coli B354]
Length = 754
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEEGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|326942108|gb|AEA18004.1| ComE operon protein 3 [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 773
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 19/156 (12%)
Query: 9 DPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
P +I G+ RLS + + + Y + IG+ +S
Sbjct: 278 SPSVIRASITGVLTLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGFQFSFVGSF 335
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
S I+ S I + + ++ L+ HF Y + N+L +
Sbjct: 336 ALLLSAPLLLVSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYSIFLNLLYV 389
Query: 120 PILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGL 153
P LS +V+P +I +L M + L V++ GL
Sbjct: 390 PFLSTIVLPCSIIILLCMPIVPFLAKGFADVLSIGL 425
>gi|307824110|ref|ZP_07654337.1| DNA internalization-related competence protein ComEC/Rec2
[Methylobacter tundripaludum SV96]
gi|307734894|gb|EFO05744.1| DNA internalization-related competence protein ComEC/Rec2
[Methylobacter tundripaludum SV96]
Length = 777
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 75/210 (35%), Gaps = 28/210 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + PF + + P G F + +S I Y
Sbjct: 329 LQRNSRPFNTLSIALFAVLIVDPLAVLSAG-----FWLSFLAVSVIVY------------ 371
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ K+ + + I S S L+ F + + +AN++A+P++S
Sbjct: 372 -TVSGRLGKLGPVWGAIK------INGVTSVGLSPLLLLFFQQVSLIAPLANLIAVPVIS 424
Query: 124 FVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSF 180
+V+P L+A+++M + +L + F ++ L + + ++ +P +
Sbjct: 425 LLVVPLSLLAVIIMFILPTLASKLFFLVDTVLQGLWWLLAHLAEIPMASINHALPSYWAL 484
Query: 181 VTIVVEFLLMVFCKT-NIRHIGSIMIGITI 209
+ V LL++ R + ++ +
Sbjct: 485 LFAVPGILLLLAPVGIPARWLSLVLFLPLV 514
Score = 43.3 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 42/136 (30%), Gaps = 5/136 (3%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK-----MIYSSE 63
P A +L G PG FD+ + +G+ A GY PK +
Sbjct: 143 QPIKAGQQWVFTVKLKRVHGTMNPGGFDYERWLFTEGVGATGYVRPSPKPVLLGRDSAWG 202
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S + W + + N + + + + + +++ I
Sbjct: 203 SISVWRQSITDQLSSALGNSASLALIKALTIGDGNSVTQEQWEVFRKTGTTHLVVISGSH 262
Query: 124 FVVIPAGLIAILLMIL 139
+I + ++L +
Sbjct: 263 IGLIAGLVYFLILKLW 278
>gi|254882156|ref|ZP_05254866.1| competence protein [Bacteroides sp. 4_3_47FAA]
gi|254834949|gb|EET15258.1| competence protein [Bacteroides sp. 4_3_47FAA]
Length = 650
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 59/159 (37%), Gaps = 16/159 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I + Y + W+ + + +
Sbjct: 355 LFDTGFQLSFLAVLSILFIYPVISR----------YWRVRHPVPRYIWG--IVAVSLAAQ 402
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +I F PVY L AN++ P++ V+I + + +L ++ +I V+ GL
Sbjct: 403 LGTAPVVIYKFAYFPVYFLPANLVVAPLV-LVIIYGSVASFVLSPFTVLHI--WVV-KGL 458
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ ++ + + + + + + V L ++
Sbjct: 459 NGVLRLLNDSMQWVGDLPVSHSGDIHLSLLQVGILYVLL 497
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 66/223 (29%), Gaps = 22/223 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFN---F--SSYYKGISAIGYFYSIPKMIYSSESHNT- 67
+ R+S P PG FD+ F + GY+ K +
Sbjct: 152 GDHLNFYTRISTPEREVIPGEFDYAAYLFRQQISGTAVIFPGYWQWTGKKSALTWKQRAG 211
Query: 68 -WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W K + S ++ + + + + L + +++ILA+ + V
Sbjct: 212 VWREKILDSYRKWGFSGDEFAVLSALTVGYKEELSEDLRETYQVAGVSHILALSGMHIAV 271
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ GL+ +L L + V + +++ +
Sbjct: 272 L-WGLLCWILRPLDRSCLLRWVKCGIIVLLLWTFAFLVGLPPSVIR-------------- 316
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
++M T R G + + + + F + + G
Sbjct: 317 AVVMCMLMTAARAAGERTLSLNTLSVAAFFMLLYNPFYLFDTG 359
>gi|228941492|ref|ZP_04104042.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228974422|ref|ZP_04134990.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228981017|ref|ZP_04141319.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis Bt407]
gi|228778677|gb|EEM26942.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis Bt407]
gi|228785258|gb|EEM33269.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228818142|gb|EEM64217.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 659
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 19/156 (12%)
Query: 9 DPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
P +I G+ RLS + + + Y + IG+ +S
Sbjct: 164 SPSVIRASITGVLTLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGFQFSFVGSF 221
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
S I+ S I + + ++ L+ HF Y + N+L +
Sbjct: 222 ALLLSAPLLLVSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYSIFLNLLYV 275
Query: 120 PILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGL 153
P LS +V+P +I +L M + L V++ GL
Sbjct: 276 PFLSTIVLPCSIIILLCMPIVPFLAKGFADVLSIGL 311
>gi|228999118|ref|ZP_04158700.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides Rock3-17]
gi|228760735|gb|EEM09699.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides Rock3-17]
Length = 774
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 66/221 (29%), Gaps = 11/221 (4%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY----FYSIPKMIYSSES 64
P ++ G+ L D + + + Y + I S
Sbjct: 279 SPSVMRASVTGVMLLLALMHSIRVSSLD---ALSMTAVLMLLYNPYMAFDIGFQFSFVGS 335
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ L + + +++ L+ HF Y + N+L +P+LS
Sbjct: 336 FALLLSASRLLQHDNGLIQNTIYLSVISQLASTPILLYHFGYFSPYSIFLNLLYVPLLSC 395
Query: 125 VVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFV 181
VV+P ++ ++ + +++ L I I F G+ P V
Sbjct: 396 VVLPCSIVIFACILFVPFVAKWLAQMLSVCLTISNDILQYCENLPFLRFTFGQTPLFLIV 455
Query: 182 TIVVEFL-LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + + + +R + + + F Y
Sbjct: 456 LYCFSIVSIFIVWERVVRKKFLFLTVGFFLFICIFHYISPY 496
>gi|161486261|ref|NP_752979.2| hypothetical protein c1052 [Escherichia coli CFT073]
gi|227884122|ref|ZP_04001927.1| possible competence protein EC [Escherichia coli 83972]
gi|227838874|gb|EEJ49340.1| possible competence protein EC [Escherichia coli 83972]
gi|307552752|gb|ADN45527.1| Rec2-related protein [Escherichia coli ABU 83972]
Length = 754
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|319643285|ref|ZP_07997913.1| competence protein [Bacteroides sp. 3_1_40A]
gi|317385189|gb|EFV66140.1| competence protein [Bacteroides sp. 3_1_40A]
Length = 639
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 59/159 (37%), Gaps = 16/159 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I + Y + W+ + + +
Sbjct: 344 LFDTGFQLSFLAVLSILFIYPVISR----------YWRVRHPVPRYIWG--IVAVSLAAQ 391
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +I F PVY L AN++ P++ V+I + + +L ++ +I V+ GL
Sbjct: 392 LGTAPVVIYKFAYFPVYFLPANLVVAPLV-LVIIYGSVASFVLSPFTVLHI--WVV-KGL 447
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ ++ + + + + + + V L ++
Sbjct: 448 NGVLRLLNDSMQWVGDLPVSHSGDIHLSLLQVGILYVLL 486
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 66/223 (29%), Gaps = 22/223 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFN---F--SSYYKGISAIGYFYSIPKMIYSSESHNT- 67
+ R+S P PG FD+ F + GY+ K +
Sbjct: 141 GDHLNFYTRISTPEREVIPGEFDYAAYLFRQQISGTAVIFPGYWQWTGKKSALTWKQRAG 200
Query: 68 -WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W K + S ++ + + + + L + +++ILA+ + V
Sbjct: 201 VWREKILDSYRKWGFSGDEFAVLSALTVGYKEELSEDLRETYQVAGVSHILALSGMHIAV 260
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ GL+ +L L + V + +++ +
Sbjct: 261 L-WGLLCWILRPLDRSCLLRWVKCGIIVLLLWTFAFLVGLPPSVIR-------------- 305
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
++M T R G + + + + F + + G
Sbjct: 306 AVVMCMLMTAARAAGERTLSLNTLSVAAFFMLLYNPFYLFDTG 348
>gi|329960186|ref|ZP_08298628.1| ComEC/Rec2-like protein [Bacteroides fluxus YIT 12057]
gi|328532859|gb|EGF59636.1| ComEC/Rec2-like protein [Bacteroides fluxus YIT 12057]
Length = 677
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 65/218 (29%), Gaps = 19/218 (8%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
K + L P LFD F + ++AI F E
Sbjct: 313 KPLAMNTMAAAAFLMLLYNPVW-----LFDVGFQLSFAAVAAILVFQPRMYSFRKVE--- 364
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ + + + +I +F + L+ N+ IP++S V+
Sbjct: 365 ---NRWLRYGWG------LVTVSVAAQMGTAPLVIFYFSRFSTHFLLTNLWVIPMVSLVL 415
Query: 127 IPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
A L+ + L L + + I I G + V +
Sbjct: 416 YSAVLL-LALTPFPVLQQAFSPITEELVRIQNKGLQWIEHLPLSSLDGIWTDVWEVLLCY 474
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
L M+ R ++ I + +++L +S S L
Sbjct: 475 LLLGMMSYAMTRRTFRNVCISLFVLLLAVSYHSVSVML 512
>gi|322420565|ref|YP_004199788.1| DNA internalization-like competence protein ComEC/Rec2 [Geobacter
sp. M18]
gi|320126952|gb|ADW14512.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter sp. M18]
Length = 786
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 80/247 (32%), Gaps = 20/247 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ DP A P LFD +F + I + P + +
Sbjct: 314 LQLKRELDPVNAIMLAACAILFLAPQT-----LFDVSFQLSFLAIWGLAVL---PPTLSA 365
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + + + + + HF + + GL+AN+L +P+
Sbjct: 366 PSSTKGKALRWP---------LLLMVASAAAILATLVHVAYHFQRVSLVGLVANLLVVPL 416
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETS- 179
+ + + +G + ++L + + ++ ++ + G P+
Sbjct: 417 MGYGAVVSGFVGLVLACV-WEVPAAALLHLAALLVHWSDQVVEHLSRAPVLEGYAPDRLD 475
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ + + C ++ +++ ++ ++L P + + D + V D
Sbjct: 476 LLIACLVLCAVTLCSCKVQRFAAVVPLLSALVLRAVPGATAADGAMRAYFLSVGQGDAAL 535
Query: 240 LISNYSN 246
L
Sbjct: 536 LHLPDGK 542
>gi|320196593|gb|EFW71216.1| hypothetical protein EcoM_01134 [Escherichia coli WV_060327]
Length = 754
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|222032644|emb|CAP75383.1| Uncharacterized protein ycaI [Escherichia coli LF82]
gi|312945433|gb|ADR26260.1| hypothetical protein NRG857_04160 [Escherichia coli O83:H1 str. NRG
857C]
Length = 754
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|329957240|ref|ZP_08297760.1| ComEC/Rec2-like protein [Bacteroides clarus YIT 12056]
gi|328522953|gb|EGF50056.1| ComEC/Rec2-like protein [Bacteroides clarus YIT 12056]
Length = 684
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 12/136 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI +Y +K+ ++ +
Sbjct: 342 LFDVGFQLSFAAVTAILLLQPG---LYGLLPVKNTALRKVWAL---------ITVSIAAQ 389
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F + L+ N+ IP++S +V ++ L SL + + +
Sbjct: 390 IGTAPLVMLYFSRFSTHFLLTNLWVIPLVSLIVYATVVLLALTPFPSLQHFFAEMTEMLI 449
Query: 154 DIIIHIAHRISVAHNE 169
+ + I
Sbjct: 450 RLQNTVLRWIEQLPLA 465
>gi|294788984|ref|ZP_06754224.1| DNA internalization-related competence protein ComEC/Rec2
[Simonsiella muelleri ATCC 29453]
gi|294483086|gb|EFG30773.1| DNA internalization-related competence protein ComEC/Rec2
[Simonsiella muelleri ATCC 29453]
Length = 739
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/213 (15%), Positives = 72/213 (33%), Gaps = 19/213 (8%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + L P F + ++A+ + S
Sbjct: 294 RTQQSSWQIWWAALAVVLLYQPMAVLA-----VGFWLSFGLVAALLWALSFR---LPKLG 345
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + +KQ+ + A + G + F +PV+ + N LAIP S+
Sbjct: 346 KRGFWLHRYLVLKQAITGQWAATL--IGGVATIFL----FGLLPVFSPLVNALAIPFFSW 399
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
++ P L+A L I + ++I+I++ + + E P T F +
Sbjct: 400 ILTPLALLASFLPFDFPKIIAAWLGEHTINILINLGNSL----PETAFTHTPATLFGLAI 455
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
V L+++ +R + + L+ P
Sbjct: 456 VAALIILLPNG-LRLKPLAWVLLGAFALYQPPP 487
>gi|294776911|ref|ZP_06742372.1| ComEC/Rec2-like protein [Bacteroides vulgatus PC510]
gi|294449159|gb|EFG17698.1| ComEC/Rec2-like protein [Bacteroides vulgatus PC510]
Length = 650
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 59/159 (37%), Gaps = 16/159 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I + Y + W+ + + +
Sbjct: 355 LFDTGFQLSFLAVLSILFIYPVISR----------CWRVRHPVPRYIWG--IVAVSLAAQ 402
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +I F PVY L AN++ P++ V+I + + +L ++ +I V+ GL
Sbjct: 403 LGTAPVVIYKFAYFPVYFLPANLIVAPLV-LVIIYGSVASFVLSPFTVLHI--WVV-KGL 458
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ ++ + + + + + + V L ++
Sbjct: 459 NGVLRLLNDSMQWVGDLPVSHSGDIHLSLLQVGILYVLL 497
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 66/223 (29%), Gaps = 22/223 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFN---F--SSYYKGISAIGYFYSIPKMIYSSESHNT- 67
+ R+S P PG FD+ F + GY+ K +
Sbjct: 152 GDHLNFYTRISTPEREVIPGEFDYAAYLFRQQISGTAVIFPGYWQWTGKKSALTWKQRAG 211
Query: 68 -WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W K + S ++ + + + + L + +++ILA+ + V
Sbjct: 212 VWREKILDSYRKWGFSGDEFAVLSALTVGYKEELSEDLRETYQVAGVSHILALSGMHIAV 271
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ GL+ +L L + V + +++ +
Sbjct: 272 L-WGLLCWILRPLDRSCLLRWVKCGIIVLLLWTFAFLVGLPPSVIR-------------- 316
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
++M T R G + + + + F + + G
Sbjct: 317 AVVMCMLMTAARAAGERTLSLNTLSVAAFFMLLYNPFYLFDTG 359
>gi|260171879|ref|ZP_05758291.1| competence protein [Bacteroides sp. D2]
Length = 649
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 56/168 (33%), Gaps = 19/168 (11%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++ + P+ LFD F + +++I + +
Sbjct: 281 MVGRQPLSLNTLAAAAWLMLFCNPAW-----LFDVGFQLSFLAVASILLIQKPIYHLITV 335
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ I + I ++ + ++ +F PV+ L+ N++ IP +
Sbjct: 336 KG----------RIGKYIWGLI--SVSVAAQIGTAPLVMFYFSRFPVHFLLTNLVVIPFI 383
Query: 123 SFVVIPAGLIAILLMILSLDNIPFG-VMAWGLDIIIHIAHRISVAHNE 169
+ ++ A +I +LL LS I + L+ + +
Sbjct: 384 TIILY-AAVIMLLLTPLSWLQIVVAEGVKKLLEGLNFFVRWVEQLPYA 430
>gi|113867196|ref|YP_725685.1| metallo-beta-lactamase superfamily hydrolase [Ralstonia eutropha
H16]
gi|113525972|emb|CAJ92317.1| predicted hydrolase (metallo-beta-lactamase superfamily) [Ralstonia
eutropha H16]
Length = 804
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 69/229 (30%), Gaps = 21/229 (9%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P PG F + ++ I + + + T + ++
Sbjct: 354 DPWAVMLPG-----FWLSFGAVAVIFF--------AARPGRDASTEGRWQRLRSVLAAGA 400
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
R + + F + V +AN +AIP++S +V P L+ L ++L
Sbjct: 401 RTQWAV--TIGLVPLTLLLFGQVSVVSPLANAVAIPVVSLLVTPLALLGAAL-PMALAGP 457
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFC----KTNIRH 199
V + + + +S + + V + L+V + +
Sbjct: 458 VLAVAHLAMVALAAVLGWLSALPWAMWEAASAGPLALVLAALGVGLLVAPVATARARLHG 517
Query: 200 IGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP 248
++ + F +L +G V + + + + P
Sbjct: 518 GLLMLPMLLARGPPVAHGEFRAVMLDVGQGTAVLVRTRAHALLYDTGPS 566
>gi|238757621|ref|ZP_04618805.1| hypothetical protein yaldo0001_19420 [Yersinia aldovae ATCC 35236]
gi|238704126|gb|EEP96659.1| hypothetical protein yaldo0001_19420 [Yersinia aldovae ATCC 35236]
Length = 760
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/300 (11%), Positives = 89/300 (29%), Gaps = 29/300 (9%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNTWTWKKISS 75
+ +S P +F + ++ +F+ +P ++ N +
Sbjct: 318 ALALILISDPLAVLS-----DSFWLSSLAVFSLICWFHWVPVAPRFTQGWNGVVVRWFHL 372
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
L + IG FH + + + AN+ A+PI+S + +P L+A+
Sbjct: 373 QSGMMLLLLPLQIGL-------------FHGVSLLSIPANLWAVPIVSLLTVPCVLLALA 419
Query: 136 LMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+L I + + L + + + S +L ++ +
Sbjct: 420 FTLLPAVAGIFWHMADLSLTATLFPLNYFN-----IGWVPTGAASVALSYSGWLAILIWR 474
Query: 195 -TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLISNYSNPPSF 250
R+ ++ + I ++ + L ++++ Y S+
Sbjct: 475 FQWWRNYPLGVMVLCINMVLLSQRRDDYHWRVDMLDIGHGLAVVIERGGKAIIYDTGNSW 534
Query: 251 IFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
+++I P+ + E + + + F + +
Sbjct: 535 DSGSMAASVILPYLHWRGITVEQIILSHDHRDHTGGLTDLQLAFPWATVRAPFALEVNGL 594
>gi|325104056|ref|YP_004273710.1| ComEC/Rec2-related protein [Pedobacter saltans DSM 12145]
gi|324972904|gb|ADY51888.1| ComEC/Rec2-related protein [Pedobacter saltans DSM 12145]
Length = 688
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 21/144 (14%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
K + + I L+ P D F + + + Y + +Y+ +
Sbjct: 336 KGKSNSYNVLAIAAFIILLANPYNLM-----DIGFQLSFLAVLGLIYIHPKLYQLYNPK- 389
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
I I + + + + +FH P Y LI N+ + + +
Sbjct: 390 ---------YKIVDLCWQCI--CVSLAAQLATTPLSLFYFHQFPTYFLIGNLF-MALPAT 437
Query: 125 VVIPAGLIAILLMILSLDNIPFGV 148
+++ G I + + +D + + +
Sbjct: 438 IIMIGGFIFLA---IPIDIVQYWL 458
>gi|237714420|ref|ZP_04544901.1| competence protein [Bacteroides sp. D1]
gi|229445584|gb|EEO51375.1| competence protein [Bacteroides sp. D1]
Length = 618
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 56/168 (33%), Gaps = 19/168 (11%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++ + P+ LFD F + +++I IY
Sbjct: 250 MVGREPLSLNTLAVAAWLMLFCNPAW-----LFDVGFQLSFLAVASILLIQKP---IYHL 301
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + K + + ++ + ++ +F V+ L+ N++ IP++
Sbjct: 302 ITVKSRIGKHVWGL---------MSVSVAAQIGTAPLVLFYFSRFSVHFLLTNLVVIPLI 352
Query: 123 SFVVIPAGLIAILLMILSLDNIPFG-VMAWGLDIIIHIAHRISVAHNE 169
+ ++ A ++ +LL S I + L+ + +
Sbjct: 353 TIILY-AAVVMLLLTPFSWLQIGVAGGVKKLLEGLNFFVRWVERLPCA 399
>gi|224500499|ref|ZP_03668848.1| hypothetical protein LmonF1_12851 [Listeria monocytogenes Finland
1988]
Length = 740
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWK-------KISSIKQSFLNEIRANIGT 90
S + I S I +F P ++ ++T + +Q +I
Sbjct: 289 WSSFSAICLSFILFFLLQPYVMKEVGFQLSYTVSLGIILSSRQILAQQQNAFTKSLSISF 348
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S+ ++ HF+ G+ N++ +PI + +++P L +L S + + P V
Sbjct: 349 ISTIMSSVVMMYHFYSFSWEGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHFPEVV 408
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ + + ++ + + + ++ + P
Sbjct: 409 LTFFIQLVEKLTYIFAKIPHQTIVTGRP 436
>gi|153807348|ref|ZP_01960016.1| hypothetical protein BACCAC_01626 [Bacteroides caccae ATCC 43185]
gi|149129710|gb|EDM20922.1| hypothetical protein BACCAC_01626 [Bacteroides caccae ATCC 43185]
Length = 529
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 51/137 (37%), Gaps = 14/137 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + +++I Y + +S I + F + ++
Sbjct: 187 LFDVGFQLSFLAVASILLTYKPIYRLLPVKS----------RIGRYFWGLM--SVSIAAQ 234
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWG 152
+ ++ +F + L N++ IP+++ ++ + ++ +LL L N + +
Sbjct: 235 LGTAPLVMFYFSRFSTHFLFTNLVVIPLVTIILY-SAVVMLLLTPLHWIQNFIAEGVKFL 293
Query: 153 LDIIIHIAHRISVAHNE 169
LD + H +
Sbjct: 294 LDALNTFIHWVEQLPYA 310
>gi|331656984|ref|ZP_08357946.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA206]
gi|331055232|gb|EGI27241.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA206]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRVVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|162138458|ref|YP_540000.2| hypothetical protein UTI89_C0984 [Escherichia coli UTI89]
gi|218557818|ref|YP_002390731.1| hypothetical protein ECS88_0941 [Escherichia coli S88]
gi|218364587|emb|CAR02273.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
gi|307627660|gb|ADN71964.1| hypothetical protein UM146_12985 [Escherichia coli UM146]
gi|323958218|gb|EGB53927.1| competence protein [Escherichia coli H263]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|110641110|ref|YP_668840.1| hypothetical protein ECP_0924 [Escherichia coli 536]
gi|218688753|ref|YP_002396965.1| hypothetical protein ECED1_0940 [Escherichia coli ED1a]
gi|306812634|ref|ZP_07446827.1| hypothetical protein ECNC101_11997 [Escherichia coli NC101]
gi|110342702|gb|ABG68939.1| hypothetical membrane protein YcaI [Escherichia coli 536]
gi|218426317|emb|CAR07142.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|305853397|gb|EFM53836.1| hypothetical protein ECNC101_11997 [Escherichia coli NC101]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|209918163|ref|YP_002292247.1| hypothetical protein ECSE_0972 [Escherichia coli SE11]
gi|209911422|dbj|BAG76496.1| conserved hypothetical protein [Escherichia coli SE11]
gi|324019078|gb|EGB88297.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 117-3]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAECWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 497
>gi|295086558|emb|CBK68081.1| Competence protein. [Bacteroides xylanisolvens XB1A]
Length = 372
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 49/137 (35%), Gaps = 14/137 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + +++I IY + + K + + ++
Sbjct: 30 LFDVGFQLSFLAVASILLIQKP---IYHLITVKSRIGKYVWGL---------MSVSIAAQ 77
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG-VMAWG 152
+ ++ +F V+ L+ N++ IP+++ ++ A + +LL S I +
Sbjct: 78 IGTAPLVLFYFSRFSVHFLLTNLVVIPLITIILY-AAVAMLLLTPFSWLQIGVAGGVKKL 136
Query: 153 LDIIIHIAHRISVAHNE 169
L+ + +
Sbjct: 137 LEGLNFFVRWVEQLPCA 153
>gi|160883235|ref|ZP_02064238.1| hypothetical protein BACOVA_01204 [Bacteroides ovatus ATCC 8483]
gi|156111460|gb|EDO13205.1| hypothetical protein BACOVA_01204 [Bacteroides ovatus ATCC 8483]
Length = 638
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 61/190 (32%), Gaps = 21/190 (11%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++ + P+ LFD F + +++I + +
Sbjct: 270 MVGRQPLSLNTLAAAAWLMLFCNPAW-----LFDVGFQLSFLAVASILLIQKPIYHLITV 324
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ I + + ++ + ++ +F V+ L+ N++ IP +
Sbjct: 325 KG----------RIGKYIWGLM--SVSVAAQIGTAPLVMFYFSRFSVHFLLTNLVVIPFI 372
Query: 123 SFVVIPAGLIAILLMILSLDNIPFG-VMAWGLDIIIHIAHRISVAHNEFCIGRI--PETS 179
+ ++ A +I +LL LS I + L+ + + G
Sbjct: 373 TIILY-AAVIMLLLTPLSWLQIVVAEGVKKLLEGLNFFVRWVEQLPYASIDGIWLYQSEI 431
Query: 180 FVTIVVEFLL 189
+V FLL
Sbjct: 432 LGIYIVGFLL 441
>gi|218700568|ref|YP_002408197.1| hypothetical protein ECIAI39_2234 [Escherichia coli IAI39]
gi|218370554|emb|CAR18361.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCPA----- 348
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 349 ----WQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEEGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 497
>gi|242239637|ref|YP_002987818.1| hypothetical protein Dd703_2209 [Dickeya dadantii Ech703]
gi|242131694|gb|ACS85996.1| DNA internalization-related competence protein ComEC/Rec2 [Dickeya
dadantii Ech703]
Length = 747
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 80/240 (33%), Gaps = 21/240 (8%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++A+ ++Y + W + ++ +
Sbjct: 323 SFWLSALAVAALIFWYQWAPLSAGRWRGVCGWWVRALHLQIGITLLLVPLQVLL------ 376
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDII 156
F I + L AN+ A+P++S + P L+ + LM+ S L + + + L ++
Sbjct: 377 ------FQGISLSSLPANLWAVPLVSLITTPLVLVTLPLMVFSPLAHALWWLADRSLALV 430
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ + + + P + + +L ++ + + + ++ L P
Sbjct: 431 FAL---LQALPDGWL--PAPASLLPFSALGWLAVISWRLGWWRSQTAGLLALMLWLALRP 485
Query: 217 YSFSPDLLI---SEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
+ SP + L ++++ Y + + I P+ ++ E
Sbjct: 486 RTPSPQWRVDMLDVGHGLAVVIERQGKAVLYDTGARWEGGDSMTRDILPYLRWRGLRLEQ 545
>gi|281178044|dbj|BAI54374.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|299067171|emb|CBJ38367.1| conserved membrane protein of unknown function, ComEC/Rec2 domain
[Ralstonia solanacearum CMR15]
Length = 845
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 64/222 (28%), Gaps = 16/222 (7%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
L P G + ++ I I + + +
Sbjct: 365 AAAWVALVDPWAVMSAGG-----WLSFGAVAVIFLAARIVAADARDDGR-----RPAWPV 414
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ A + + + F + V +AN LAIP++SFV P L+ L
Sbjct: 415 RAWRGLRGAARVQLAVTFGLLPLTLLLFQQVSVVSAVANALAIPVVSFVTTPLALMGAAL 474
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
++ +++ + P ++ VV L++
Sbjct: 475 -PEPWSQPVLAWAEASFAWLMPWLDALALPDWSVWVAPVAPAWAWGLAVVGVPLLLVPGG 533
Query: 196 N----IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ R G++++ ++ P ++ + G A
Sbjct: 534 HRAWAWRAKGAVLLLPMLLARAPAPPPGEFRMVAFDIGQGAA 575
>gi|284036834|ref|YP_003386764.1| ComEC/Rec2-related protein [Spirosoma linguale DSM 74]
gi|283816127|gb|ADB37965.1| ComEC/Rec2-related protein [Spirosoma linguale DSM 74]
Length = 708
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/215 (10%), Positives = 65/215 (30%), Gaps = 23/215 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ + P LF F Y + IG +
Sbjct: 334 RQQQFINSLAASAFFILCFDPYA-----LFSAGFQLSYLAVGGIGTWQ------SPLYQS 382
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
T+ +K I + + + +FH P Y L+AN + I ++S +
Sbjct: 383 ITFRYKLADKIWE------LTAVALVAQLITFPLGVFYFHQFPTYFLLANPIVI-VMSNI 435
Query: 126 VIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG----RIPETSF 180
++P + + + ++ + ++ + + + G ++
Sbjct: 436 LLPLAMTTLAFSGIPYVNELLGWLLEKTAWFLNYAVTQTGSLPGAAWDGLWISQLAMVLI 495
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
++ + ++ + + + + + + L +
Sbjct: 496 YVVLFCGVALLITRDRVYLWATSLASLVVAGLTIW 530
>gi|167619426|ref|ZP_02388057.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis Bt4]
Length = 845
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/356 (11%), Positives = 95/356 (26%), Gaps = 38/356 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ P G + P PG F + ++AI + S +
Sbjct: 341 RSLAPSSVLAAALGCVLIVDPWAVTSPG-----FWLSFCAVAAILFASSGRSAAREARDL 395
Query: 66 NTWTWKKISSIKQS-----------------------------FLNEIRANIGTYGSASA 96
+ + ++ A + +
Sbjct: 396 DEARGSIDGACRERASPPACPARWRAACARARMRARRAIGRLVRRVRDAARAQFAVTIAL 455
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F IP+ G +AN AIP + +V P L ++L LD + + + +
Sbjct: 456 APLTALWFAQIPLTGPLANAFAIPWVGSLVTPIVLAGVVL-PAPLDAPAYVLGEALVAAL 514
Query: 157 IHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFT 214
+ + A + + + T + + + +R + ++
Sbjct: 515 MRFLEAAAGAGRTVWMLPVPGGFALATAAAGVVWALTPRGWPLRGAAPLAWLPLVVPAPL 574
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
P + L + G A++ + + P S ++ PF A V+ D
Sbjct: 575 APPDGTFRLTALDVGQGSAVLIETARHALLFDAGPGPEASNAGERVVVPFLRARGVRMLD 634
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
+ + + + + + + + + L C
Sbjct: 635 TLVVSHADSDHAGGAPAVLEAIAVAQVTGGLPPSNRLWRVAHAAGVADALPCAAGQ 690
>gi|81246063|gb|ABB66771.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 748
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 76/221 (34%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 325 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 373
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 374 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 427
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ S+ I +
Sbjct: 428 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLK--SLQEGWINIAERWQW---L 482
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 483 SFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 523
>gi|149927850|ref|ZP_01916101.1| DNA internalization-related competence protein ComEC/Rec2
[Limnobacter sp. MED105]
gi|149823472|gb|EDM82703.1| DNA internalization-related competence protein ComEC/Rec2
[Limnobacter sp. MED105]
Length = 811
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 74/241 (30%), Gaps = 22/241 (9%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + ++ + + + + +
Sbjct: 369 DAGFILSFGAVAVLIFVTQGHYLFIKPKQEL---------------IANAVKAQYTVTIG 413
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ F+ + +AN L+IP +SFV P L+ L+ + + A L +
Sbjct: 414 LILPCAMLFNQQSLISPLANALSIPWMSFVSTPLALLGGLVQ----QPVLLWLAANSLAL 469
Query: 156 IIHIAHRISVAHNEFCIGR-IPETSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIIILF 213
+ + P + + L+++ I R G +I + +I
Sbjct: 470 QRKWLVYFNELNWATLPVHNQPGWINALVALGCLVLILPAGLIPRWTGIALIALLLIPPP 529
Query: 214 TFPYSFSPDLLIS-EKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
L+ +G +++ +N L+ + P S ++ P+ A ++
Sbjct: 530 RPAQHDFWMTLMDVGQGTAISIQTQNHLLIYDAGPAFNARSDSARRVVLPWMAAHGYERA 589
Query: 273 D 273
D
Sbjct: 590 D 590
>gi|323938019|gb|EGB34281.1| competence protein [Escherichia coli E1520]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAECWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 497
>gi|300929608|ref|ZP_07145070.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 187-1]
gi|300462445|gb|EFK25938.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 187-1]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAECWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 497
>gi|91789018|ref|YP_549970.1| DNA internalization-like protein competence protein ComEC/Rec2
[Polaromonas sp. JS666]
gi|91698243|gb|ABE45072.1| DNA internalization-related competence protein ComEC/Rec2
[Polaromonas sp. JS666]
Length = 860
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 74/249 (29%), Gaps = 22/249 (8%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--------IYSSESHNTW 68
+ P F + + + S S
Sbjct: 397 AMAVVVTLDPWALM-----QAGFWLSFVAVGVLFAANPGASGARDSAGDGPLLSGSPVKQ 451
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
W K + A + + + + F+ + + GL+AN +AIP ++ VV P
Sbjct: 452 GWVPRLLAKPAAALLRAAREQWVVTLALTPLSLLLFNQVSLVGLLANAVAIPWVTLVVTP 511
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEF 187
++ + L + AW + ++ ++ + P V+
Sbjct: 512 LAMLGV------LWAPVWDAAAWAVGLLAVFLQWLAAWPLASVSVAAAPPWCAAFGVLGG 565
Query: 188 LLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV-DKNTLISNYS 245
+L+ + R +G ++ ++ +LL ++ G A++ T Y
Sbjct: 566 VLLALRLPWHWRALGVPLLLPVLLWQPVRVAPGQFELLAADIGQGNAVLVRTATHSLLYD 625
Query: 246 NPPSFIFSQ 254
P F
Sbjct: 626 TGPRFSRES 634
>gi|302389459|ref|YP_003825280.1| DNA internalization-related competence protein ComEC/Rec2
[Thermosediminibacter oceani DSM 16646]
gi|302200087|gb|ADL07657.1| DNA internalization-related competence protein ComEC/Rec2
[Thermosediminibacter oceani DSM 16646]
Length = 772
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/223 (10%), Positives = 57/223 (25%), Gaps = 23/223 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+F +F + I F+ + + S +
Sbjct: 334 IFSASFQLSFAATLGIILFFKPLQRFFVSIPAF---------------FRDSLAVLISAQ 378
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL +FH I + G + N + +P+ ++ L I+ + + +
Sbjct: 379 LLLFPFLAYYFHKISLAGFLLNFIIVPLAGAALLGGFLTGIVSFLPFFAVPIVKITGVLV 438
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV------FCKTNIRHIGSIMIGI 207
++ + S V + V + I +
Sbjct: 439 FLMDWVTTLASRLPFATFSVPSLGPLAVLAYFALIAAVFAPVEALGIKRRQKFAVIGLCF 498
Query: 208 TIIILFTFPYSFSPDLLISE--KGNLVALVDKNTLISNYSNPP 248
I+ F ++ + +G+ + + K+
Sbjct: 499 LIVAWSIFWVKPGFEVTFLDVGQGDCIFIKTKDGGTVLIDGGG 541
>gi|300902928|ref|ZP_07120873.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 84-1]
gi|301302478|ref|ZP_07208609.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 124-1]
gi|300405070|gb|EFJ88608.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 84-1]
gi|300842317|gb|EFK70077.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 124-1]
gi|315257954|gb|EFU37922.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 85-1]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAECWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 497
>gi|323344308|ref|ZP_08084534.1| hypothetical protein HMPREF0663_11070 [Prevotella oralis ATCC
33269]
gi|323095037|gb|EFZ37612.1| hypothetical protein HMPREF0663_11070 [Prevotella oralis ATCC
33269]
Length = 512
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 58/167 (34%), Gaps = 15/167 (8%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ +K + ++ P L+D +F + + I FY + + +
Sbjct: 321 LNRKRMSVNVLALAAIVMLIADPLV-----LWDVSFQLSFMAVMGILVFY--FPLYHLVK 373
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+T K + + + + ++ +F + Y L+ N+ A+P+ +
Sbjct: 374 DQILFTSKAVRWLWGMV------VVSVSAQLGTAPLVMYYFGNVSFYFLLTNLFAVPLAT 427
Query: 124 FVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ +++L L +I +++ ++ I+
Sbjct: 428 IILY-CVFVSVLTAPFPALQSIVIALLSAVAGVLNRGIAVIASLPGS 473
>gi|220909204|ref|YP_002484515.1| ComEC/Rec2-like protein [Cyanothece sp. PCC 7425]
gi|219865815|gb|ACL46154.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 7425]
Length = 769
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 75/229 (32%), Gaps = 26/229 (11%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+K P I +A L F F+F + I
Sbjct: 337 EQKTRPVSLLLLIA-VAMLVYNPLLIQDLGFQFSFLATLGLI----------VTAPPIAK 385
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W ++++ ++ + + F P YGL+ANI+ +L
Sbjct: 386 RLDWLPANLATL---------MSVPLAATLWVLPIQLAVFGVFPPYGLLANIVTTFLLEV 436
Query: 125 VVIPAGLIAILLMILSLDNIPF-GVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVT 182
+ I + + +I L +M + +++ I H S IG I ++
Sbjct: 437 ITIGGFISGLAALIWPLLGTGIAWLMYYPTALLLWIVHFFSRLPGSSLAIGAIAAWQVLS 496
Query: 183 ---IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEK 228
++ L+ + + + I +G+ I++ F + + + + +
Sbjct: 497 IYGLIFAVWLIPWWQRRWKLASGIAVGL-IVVPFLQLQTAAFQVTVLDN 544
>gi|161986560|ref|YP_309889.2| hypothetical protein SSON_0915 [Shigella sonnei Ss046]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|221068506|ref|ZP_03544611.1| DNA internalization-related competence protein ComEC/Rec2
[Comamonas testosteroni KF-1]
gi|220713529|gb|EED68897.1| DNA internalization-related competence protein ComEC/Rec2
[Comamonas testosteroni KF-1]
Length = 829
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/231 (13%), Positives = 76/231 (32%), Gaps = 23/231 (9%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ + ++ P L+ F + + + S +
Sbjct: 366 RWPWACVWLLALAVIVVADPWA-----LWQAGFWLSFIAVGVLLASGSGAADAKGQSAVR 420
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W K + ++ +L + F + V GL+AN+LAIP ++ VV
Sbjct: 421 RWMAKLHALWREQWLISLALAPLGLLL----------FGQVSVVGLLANLLAIPWVTLVV 470
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS--FVTIV 184
P L+A L + + + ++ + ++ + P + I
Sbjct: 471 TPLALLAAALPMAASAAAVAML------PLMGLLQWLAALPWAVWVLPQPAWWASVLAIA 524
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
L++ +R + ++ + +P +LL ++ G A++
Sbjct: 525 AGLLVIAPLPGRLRLVAALFALPALFWPQAWPRVGEFELLAADIGQGNAVI 575
>gi|298486204|ref|ZP_07004267.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298159211|gb|EFI00269.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 432
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 58/176 (32%), Gaps = 25/176 (14%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S W S ++
Sbjct: 8 VLIFEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGAWNWWQSWTRAQ 52
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL- 139
+ + + I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 53 WLIAIGLLPILLALNLP---------ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVS 103
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + L+ + ++ + +P +++ ++ +++ K
Sbjct: 104 GVGEGLLWLAGGALEWLFMFLGWVAAVLPAWLPSAMPGWAWLLSLLGAFILLLPKG 159
>gi|134300349|ref|YP_001113845.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum reducens MI-1]
gi|134053049|gb|ABO51020.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum reducens MI-1]
Length = 794
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 62/190 (32%), Gaps = 21/190 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ D T GI P L+D F + + Y + ++
Sbjct: 314 LGRQNDWPTTLATAAGIILAINPL-----DLYDIGFQLSFVATWGLLYLTPVLNNLFHQI 368
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + + +F+ + ++AN+L + ++
Sbjct: 369 PK---------------SIVLLITVPLAAQLATLPLVTLYFNLVSQVSILANLLTVHLVG 413
Query: 124 FVVIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+++ GL ++ I L L ++ ++ +D+ I + + + P V
Sbjct: 414 LIMLFGGLDLLIGTIYLPLTSLFNSGISSLIDLFIGLVQFCNSLPSASFYIPTPPLWLVF 473
Query: 183 IVVEFLLMVF 192
+ L+ F
Sbjct: 474 LYYVLLIFTF 483
>gi|320327720|gb|EFW83728.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 734
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 76/217 (35%), Gaps = 26/217 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S W S ++
Sbjct: 310 VLIFEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGAWNWWQSWTRAQ 354
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 355 WLIAIGLLPILLALNLP---------ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVP 405
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + L+ + ++ + +P +++ ++ +++ K +R
Sbjct: 406 VVGEGLLWLAGGALEWLFMFLGWVAAVLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMR 465
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+G ++ + + + ++L + G +A++
Sbjct: 466 PLGWPLLLLCVFPPLDSVPAGQAEVLQLDVGQGLAIL 502
>gi|301023016|ref|ZP_07186827.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 69-1]
gi|300397277|gb|EFJ80815.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 69-1]
Length = 754
Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|89107763|ref|AP_001543.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. W3110]
gi|90111187|ref|NP_415433.4| inner membrane protein, ComEC family of competence proteins
[Escherichia coli str. K-12 substr. MG1655]
gi|170020685|ref|YP_001725639.1| hypothetical protein EcolC_2683 [Escherichia coli ATCC 8739]
gi|170080571|ref|YP_001729891.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|188492232|ref|ZP_02999502.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 53638]
gi|194438704|ref|ZP_03070791.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 101-1]
gi|238900171|ref|YP_002925967.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|253774058|ref|YP_003036889.1| hypothetical protein ECBD_2682 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161027|ref|YP_003044135.1| hypothetical protein ECB_00917 [Escherichia coli B str. REL606]
gi|256023386|ref|ZP_05437251.1| hypothetical protein E4_08429 [Escherichia sp. 4_1_40B]
gi|300949725|ref|ZP_07163703.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 116-1]
gi|300955439|ref|ZP_07167813.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 175-1]
gi|301022407|ref|ZP_07186290.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 196-1]
gi|301643433|ref|ZP_07243481.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 146-1]
gi|307137542|ref|ZP_07496898.1| hypothetical protein EcolH7_05346 [Escherichia coli H736]
gi|312971041|ref|ZP_07785220.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 1827-70]
gi|13878949|sp|P37443|YCAI_ECOLI RecName: Full=Uncharacterized protein ycaI
gi|85674789|dbj|BAA35657.2| conserved inner membrane protein [Escherichia coli str. K12 substr.
W3110]
gi|87081801|gb|AAC73999.2| inner membrane protein, ComEC family of competence proteins
[Escherichia coli str. K-12 substr. MG1655]
gi|169755613|gb|ACA78312.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli ATCC 8739]
gi|169888406|gb|ACB02113.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|188487431|gb|EDU62534.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 53638]
gi|194422336|gb|EDX38336.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 101-1]
gi|238860215|gb|ACR62213.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|242376728|emb|CAQ31441.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|253325102|gb|ACT29704.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972928|gb|ACT38599.1| conserved inner membrane protein [Escherichia coli B str. REL606]
gi|253977142|gb|ACT42812.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|260449941|gb|ACX40363.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli DH1]
gi|299881248|gb|EFI89459.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 196-1]
gi|300317662|gb|EFJ67446.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 175-1]
gi|300450873|gb|EFK14493.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 116-1]
gi|301078147|gb|EFK92953.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 146-1]
gi|309701189|emb|CBJ00489.1| putative competence-related protein [Escherichia coli ETEC H10407]
gi|310336802|gb|EFQ01969.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 1827-70]
gi|315135561|dbj|BAJ42720.1| hypothetical protein ECDH1ME8569_0864 [Escherichia coli DH1]
gi|323962905|gb|EGB58479.1| competence protein [Escherichia coli H489]
gi|323973212|gb|EGB68404.1| competence protein [Escherichia coli TA007]
Length = 754
Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAECWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 497
>gi|255532432|ref|YP_003092804.1| ComEC/Rec2-like protein [Pedobacter heparinus DSM 2366]
gi|255345416|gb|ACU04742.1| ComEC/Rec2-related protein [Pedobacter heparinus DSM 2366]
Length = 604
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 48/129 (37%), Gaps = 15/129 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + + Y IY S KI +
Sbjct: 372 IWDIGFQLSFLAVFGLIYLQP---KIYGWLSVKNPILDKIWH---------TTAMSLAAQ 419
Query: 94 ASASIFLIKHFHCIPVYGLIANI-LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + +FH P+Y L++N+ + +PI +++ G++ ++ + L + ++ +
Sbjct: 420 LATYPLSVYYFHQFPLYFLVSNLFITLPIA--LIMYLGILILMFRLTGLGALFEWLINFT 477
Query: 153 LDIIIHIAH 161
+ IA
Sbjct: 478 NRGLDKIAG 486
>gi|329123094|ref|ZP_08251664.1| competence protein EC [Haemophilus aegyptius ATCC 11116]
gi|327471649|gb|EGF17091.1| competence protein EC [Haemophilus aegyptius ATCC 11116]
Length = 788
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 19/192 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y T I G P +F + + +Y Y
Sbjct: 301 MRRHYSSIQLFTLIVGFLLFCDPLMSLS-----VSFWLSCGAVGCLIVWYR-----YVPF 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W S + L+ +G + + F+ + + G +AN++A+PI S
Sbjct: 351 SLFQWGNSPFSQKVRWILSLFHLQLGLLLFFT--PLQLFLFNGLSLSGFLANLMAVPIYS 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
F ++P L A+ +A G+ +I + + +T
Sbjct: 409 FFLVPLILFAVFTNGAMFSWQLANKLAEGITWLISL------FQGNWFNVSFNLALVLTA 462
Query: 184 VVEFLL-MVFCK 194
+ + ++ +
Sbjct: 463 LCGGIFMLIIWR 474
>gi|170683776|ref|YP_001744257.1| hypothetical protein EcSMS35_2207 [Escherichia coli SMS-3-5]
gi|170521494|gb|ACB19672.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli SMS-3-5]
Length = 754
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPGP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRALVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEEGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 497
>gi|330985576|gb|EGH83679.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. lachrymans str. M301315]
Length = 738
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 76/217 (35%), Gaps = 26/217 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S W S ++
Sbjct: 314 VLIFEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGAWNWWQSWTRAQ 358
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 359 WLIAIGLLPILLALNLP---------ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVP 409
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + L+ + ++ + +P +++ ++ +++ K +R
Sbjct: 410 VVGEGLLWLAGGALEWLFMFLGWVAAVLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMR 469
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+G ++ + + + ++L + G +A++
Sbjct: 470 PLGWPLLLLCVFPPLDSVPAGQVEVLQLDVGQGLAIL 506
>gi|310820619|ref|YP_003952977.1| DNA internalization-like competence protein comec/rec2 [Stigmatella
aurantiaca DW4/3-1]
gi|309393691|gb|ADO71150.1| DNA internalization-like competence protein ComEC/Rec2 [Stigmatella
aurantiaca DW4/3-1]
Length = 833
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 48/170 (28%), Gaps = 4/170 (2%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGS 93
D + + + ++ + + +++ I I +
Sbjct: 368 DLSLQLSFLAVMSLLLLTPALRGAVPIAPPDAQEKRRLVRIAGQARETILETFCASVAVT 427
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
++ + F + GLI+NI+ +P+ + A A L + L AW
Sbjct: 428 VASLPLVASAFGRASLAGLISNIVCLPLCGLLTGFAAGGAALFTVAPVLATPVLWGGAWT 487
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
++++ + + + + + R G
Sbjct: 488 SEVLLVLTRFFAAVPLATVDLPPFGAVTTLLYAAGLGAWALGTGRWRFAG 537
>gi|158320258|ref|YP_001512765.1| ComEC/Rec2-related protein [Alkaliphilus oremlandii OhILAs]
gi|158140457|gb|ABW18769.1| ComEC/Rec2-related protein [Alkaliphilus oremlandii OhILAs]
Length = 501
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 56/166 (33%), Gaps = 21/166 (12%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++YD A I I + P LF +F + +I ++ + +
Sbjct: 315 FLERRYDSLNALFFIGFILLIYRPMT-----LFSVSFQLSFVATLSILLWHPLLNRVLRK 369
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
++ ++ + HF I + L NI+ +P+L
Sbjct: 370 KTGFLGEL---------------LSVTLAAQIGTLPLMAYHFQQISLISLATNIMILPLL 414
Query: 123 S-FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
+ + I I + L L ++ + L+ + I+ + ++
Sbjct: 415 APMLSIALVSIVLGLFSFELGSLCNEITNQLLNYMNWISLKCAIIP 460
>gi|323942829|gb|EGB38994.1| competence protein [Escherichia coli E482]
Length = 738
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 283 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 331
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 332 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 385
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 386 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAECWQWLSF 442
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 443 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 481
>gi|228969943|ref|ZP_04130663.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228789765|gb|EEM37627.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 544
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ + P +I G+ RLS + + + Y + IG+
Sbjct: 270 LYMVLAGASPSVIRASIAGVLMLIAFMCSIRLSSLDALSVTAICMLIYDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I + + ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPFLLGSSNGVIRNSIYISIISQL------VSTPILLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ N+L +P LS +V+P +I +L M + L V++ GL + +
Sbjct: 382 IFLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSIGLSMSNVLLSYCESLPFN 441
Query: 170 FCIGRIPETSFVTIVVEFL--LMVFCKTNI 197
I + V + + +++ +
Sbjct: 442 QLIFGKTSFNLVAVYCASIVSILIVWERRA 471
>gi|331682420|ref|ZP_08383039.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H299]
gi|331080051|gb|EGI51230.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H299]
Length = 754
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLVAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---KWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|257487569|ref|ZP_05641610.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 738
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 76/217 (35%), Gaps = 26/217 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S W S ++
Sbjct: 314 VLIFEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGAWNWWQSWTRAQ 358
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 359 WLIAIGLLPVLLALNLP---------ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVP 409
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + L+ + ++ + +P +++ ++ +++ K +R
Sbjct: 410 VVGEGLLWLAGGALEWLFMFLGWVAAVLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMR 469
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+G ++ + + + ++L + G +A++
Sbjct: 470 PLGWPLLLLCVFPPLDSVPAGQVEVLQLDVGQGLAIL 506
>gi|315619107|gb|EFU99687.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 3431]
Length = 624
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 169 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 217
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 218 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 271
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 272 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAECWQWLSF 328
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 329 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 367
>gi|121534790|ref|ZP_01666610.1| DNA internalization-related competence protein ComEC/Rec2
[Thermosinus carboxydivorans Nor1]
gi|121306585|gb|EAX47507.1| DNA internalization-related competence protein ComEC/Rec2
[Thermosinus carboxydivorans Nor1]
Length = 796
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/181 (9%), Positives = 54/181 (29%), Gaps = 20/181 (11%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
P ++ +A L+ L+D +F + + + + Y + ++
Sbjct: 325 PTALSLSALAMLAVQPAL----LYDISFQLSFAATAGLVFLYRKTLAVLTTVLPELLAGP 380
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
+ FL +F+ + + +AN++ +P++ VVI
Sbjct: 381 --------------FAVTLAAQLGVLPFLAWYFNTLSLSAFLANLIIVPLVEGVVILGLA 426
Query: 132 IAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLL 189
+ + + + + ++ +A ++ + + +
Sbjct: 427 ACLASLFTGWGAKVLLALCGLAIGAVVQLAAFLAALPGGVVYLPPFTIWAGLIYYFLIAW 486
Query: 190 M 190
Sbjct: 487 A 487
>gi|315920191|ref|ZP_07916431.1| competence protein [Bacteroides sp. D2]
gi|313694066|gb|EFS30901.1| competence protein [Bacteroides sp. D2]
Length = 697
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 56/168 (33%), Gaps = 19/168 (11%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++ + P+ LFD F + +++I + +
Sbjct: 329 MVGRQPLSLNTLAAAAWLMLFCNPAW-----LFDVGFQLSFLAVASILLIQKPIYHLITV 383
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ I + I ++ + ++ +F PV+ L+ N++ IP +
Sbjct: 384 KG----------RIGKYIWGLI--SVSVAAQIGTAPLVMFYFSRFPVHFLLTNLVVIPFI 431
Query: 123 SFVVIPAGLIAILLMILSLDNIPFG-VMAWGLDIIIHIAHRISVAHNE 169
+ ++ A +I +LL LS I + L+ + +
Sbjct: 432 TIILY-AAVIMLLLTPLSWLQIVVAEGVKKLLEGLNFFVRWVEQLPYA 478
>gi|269469109|gb|EEZ80657.1| hydrolase,metallo-beta-lactamase superfamily [uncultured SUP05
cluster bacterium]
Length = 701
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 27/158 (17%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ + ++ + + GIA L P +F F + ++ I Y +
Sbjct: 250 LRRHHNVWQ----LYGIALLLTLM--VNPVSIFSVGFWLSFYVVAVIIYGAGQHR----- 298
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+W ++ I I + S + F+ + IAN++AIP+
Sbjct: 299 --DKSWIYRLIY-------------IQLLITLSTIPLIAWFFNTGSILSPIANLVAIPVF 343
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
SF+ P LI L + +L + +I ++
Sbjct: 344 SFITTPLSLIGALFALSNLTYLAEISFEISSQSLIALS 381
>gi|331012615|gb|EGH92671.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 734
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 76/217 (35%), Gaps = 26/217 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S W S ++
Sbjct: 310 VLIFEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGAWNWWQSWTRAQ 354
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 355 WLIAIGLLPVLLALNLP---------ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVP 405
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + L+ + ++ + +P +++ ++ +++ K +R
Sbjct: 406 VVGEGLLWLAGGALEWLFMFLGWVAAVLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMR 465
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+G ++ + + + ++L + G +A++
Sbjct: 466 PLGWPLLLLCVFPPLDSVPAGQVEVLQLDVGQGLAIL 502
>gi|218704340|ref|YP_002411859.1| hypothetical protein ECUMN_1106 [Escherichia coli UMN026]
gi|293404218|ref|ZP_06648212.1| ycaI protein [Escherichia coli FVEC1412]
gi|298379998|ref|ZP_06989603.1| ycaI protein [Escherichia coli FVEC1302]
gi|300901657|ref|ZP_07119717.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 198-1]
gi|331662326|ref|ZP_08363249.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA143]
gi|218431437|emb|CAR12315.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|291428804|gb|EFF01829.1| ycaI protein [Escherichia coli FVEC1412]
gi|298279696|gb|EFI21204.1| ycaI protein [Escherichia coli FVEC1302]
gi|300354950|gb|EFJ70820.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 198-1]
gi|331060748|gb|EGI32712.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA143]
Length = 754
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 497
>gi|315645944|ref|ZP_07899065.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus vortex V453]
gi|315278705|gb|EFU42019.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus vortex V453]
Length = 884
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 60/159 (37%), Gaps = 19/159 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + + + F +PK++ W + I +
Sbjct: 354 VSFQLSFIVTAGLMIF--VPKLMPLLRFMPRWLAGTVG-------------ITVVAQLIS 398
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGL 153
I +F+ + + +IAN++ +P++S +V+P G++++LL + + + W
Sbjct: 399 FPLTIYYFNQVSLLSVIANLILVPVISLIVLPLGMVSLLLSWVWMRGAGWLAN-ITEWLN 457
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ I ++ + + P +++ L ++
Sbjct: 458 QLTFRIVEWMNASSAFMTLWPSPSLAWILAYYVALYVLL 496
>gi|237712462|ref|ZP_04542943.1| competence protein [Bacteroides sp. 9_1_42FAA]
gi|229453783|gb|EEO59504.1| competence protein [Bacteroides sp. 9_1_42FAA]
Length = 650
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 16/155 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I + Y + W+ + + +
Sbjct: 355 LFDTGFQLSFLAVFSILFIYPVIFR----------CWRVHHPVPRYIWG--IVAVSLAAQ 402
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +I F PV L AN++ P++ FV+I + + +L ++ +I V+ GL
Sbjct: 403 LGTAPVVIYKFAYFPVCFLPANLIVAPLV-FVIIYGSVASFVLSPFTVLHI--WVV-KGL 458
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
+ ++ + + + I + V L
Sbjct: 459 NGVLWLLNNSMQWVGDLPISHSGDIHLSLFQVGIL 493
Score = 36.7 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 65/223 (29%), Gaps = 22/223 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFN---F--SSYYKGISAIGYFYSIPKMIYSSESHNT- 67
+ R+S PG FD+ F + GY+ K +
Sbjct: 152 GDHLNFYTRISTSEREVIPGEFDYAAYLFRQQISGTAVIFPGYWQWTGKKSALTWKQRAG 211
Query: 68 -WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W K + + ++ + + + + L + +++ILA+ + V
Sbjct: 212 VWREKILDNYRKWGFSGDEFAVLSALTVGYKEELSEDLRETYQVAGVSHILALSGMHIAV 271
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ GL+ +L L + V + +++ +
Sbjct: 272 L-WGLLCWILRPLDRSCLLRWVKCGIIVLLLWTFAFLVGLPPSVIR-------------- 316
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
++M T R G + + + + F + + G
Sbjct: 317 AVVMCMLMTVARAAGERTLSLNTLAIAAFFMLLYNPFYLFDTG 359
>gi|295132525|ref|YP_003583201.1| competence protein [Zunongwangia profunda SM-A87]
gi|294980540|gb|ADF51005.1| competence protein [Zunongwangia profunda SM-A87]
Length = 669
Score = 65.2 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 58/163 (35%), Gaps = 18/163 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+F F + + +I F + W I + F I +
Sbjct: 347 IFQVGFQLSFAAVFSIALFLPRFHKL----------WYPKQRIVRFFYQII--TVSLCAQ 394
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-----LDNIPFGV 148
+ +FH P L+ NI+ +P+L +++ +G+ ++L IL L + +
Sbjct: 395 IGVLPLSLFYFHQFPGLFLLTNIVILPVLGVLLV-SGISILILGILGIRPEILIDFYSFL 453
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+ + I +A + + N+ + +++ ++
Sbjct: 454 VEKLNEFIKWVASQENFIINDIHLSAFSVLFLFGVIISLFFLL 496
>gi|218438571|ref|YP_002376900.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 7424]
gi|218171299|gb|ACK70032.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 7424]
Length = 734
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 61/184 (33%), Gaps = 22/184 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + W KK+ + I I S
Sbjct: 355 IWDLGFQLSFLSTFGLIV-------------TAPWLEKKLDWLPPLITFII--TIPIAAS 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
L+ F + Y + NI+ P++ + + + A + ++ L V+ +
Sbjct: 400 IWTLPLLMHTFSTVATYSIPCNIITAPLVMLISLGGMISAGVALLFPLGGSAIAWVLDYP 459
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIR---HIGSIMIGIT 208
++I IA + + +G++P I +L+ G + +T
Sbjct: 460 TQMLIAIASFVVHLPGSSYAVGKLPVGMMGLIY--GVLLAIWLNQWCQKHWQGISLFLVT 517
Query: 209 IIIL 212
++++
Sbjct: 518 VVVV 521
>gi|83718537|ref|YP_442420.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis E264]
gi|257138623|ref|ZP_05586885.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis E264]
gi|83652362|gb|ABC36425.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis E264]
Length = 845
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/268 (11%), Positives = 68/268 (25%), Gaps = 43/268 (16%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ P G + P PG F + ++AI + S +
Sbjct: 341 RSLAPSSVLAAALGCVLIVDPWAVTSPG-----FWLSFCAVAAILFASSGRSAAREARDL 395
Query: 66 NTWTWKKISSIKQS-----------------------------FLNEIRANIGTYGSASA 96
+ + ++ A + +
Sbjct: 396 DEARGSIDGACRERASPPACPARWRAACARARMRARRAIGRLVRRVRDAARAQFAVTIAL 455
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F IP+ G +AN AIP + +V P L ++L LD + + + +
Sbjct: 456 APLTALWFAQIPLTGPLANAFAIPWVGSLVTPIVLAGVVL-PAPLDAPAYVLGEALVAAL 514
Query: 157 IHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ + A + + + T + + + + + +
Sbjct: 515 MRFLEAAAGAGRTVWMLPVPGGFALATAAAGVVWALTPRGW-------PLRGAAPLAWLP 567
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISN 243
+P L L AL
Sbjct: 568 LVVPAPLALPDGTFRLTALDVGQGSAVL 595
>gi|309795102|ref|ZP_07689522.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 145-7]
gi|308121406|gb|EFO58668.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 145-7]
Length = 563
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 108 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 156
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 157 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 210
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 211 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 267
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 268 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 306
>gi|323967160|gb|EGB62584.1| competence protein [Escherichia coli M863]
Length = 754
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 72/223 (32%), Gaps = 26/223 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L ++ + + L ++ + +
Sbjct: 402 TVPLILAAMVMHLSGPLIVEQGVWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRALPAMCVAGGLLMCWPLWQKPRPDAW 499
>gi|237726653|ref|ZP_04557134.1| competence protein [Bacteroides sp. D4]
gi|229435179|gb|EEO45256.1| competence protein [Bacteroides dorei 5_1_36/D4]
Length = 650
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 16/155 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I + Y + W+ + + +
Sbjct: 355 LFDTGFQLSFLAVFSILFIYPVIFR----------CWRVHHPVPRYIWG--IVAVSLAAQ 402
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +I F PV L AN++ P++ FV+I + + +L ++ +I V+ GL
Sbjct: 403 LGTAPVVIYKFAYFPVCFLPANLIVAPLV-FVIIYGSVASFVLSPFTVLHI--WVV-KGL 458
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
+ ++ + + + I + V L
Sbjct: 459 NGVLWLLNNSMQWVGDLPISHSGDIHLSLFQVGIL 493
Score = 36.7 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 65/223 (29%), Gaps = 22/223 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFN---F--SSYYKGISAIGYFYSIPKMIYSSESHNT- 67
+ R+S PG FD+ F + GY+ K +
Sbjct: 152 GDHLNFYTRISTSEREVIPGEFDYAAYLFRQQISGTAVIFPGYWQWTGKKSALTWKQRAG 211
Query: 68 -WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W K + + ++ + + + + L + +++ILA+ + V
Sbjct: 212 VWREKILDNYRKWGFSGDEFAVLSALTVGYKEELSEDLRETYQVAGVSHILALSGMHIAV 271
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ GL+ +L L + V + +++ +
Sbjct: 272 L-WGLLCWILRPLDRSCLLRWVKCGIIVLLLWTFAFLVGLPPSVIR-------------- 316
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
++M T R G + + + + F + + G
Sbjct: 317 AVVMCMLMTVARAAGERTLSLNTLAIAAFFMLLYNPFYLFDTG 359
>gi|193064633|ref|ZP_03045712.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E22]
gi|194428391|ref|ZP_03060932.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli B171]
gi|260843163|ref|YP_003220941.1| hypothetical protein ECO103_0956 [Escherichia coli O103:H2 str.
12009]
gi|192927690|gb|EDV82305.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E22]
gi|194413606|gb|EDX29887.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli B171]
gi|257758310|dbj|BAI29807.1| conserved predicted inner membrane protein [Escherichia coli
O103:H2 str. 12009]
gi|323159539|gb|EFZ45519.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E128010]
Length = 754
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 497
>gi|315608002|ref|ZP_07882995.1| competence protein ComEC [Prevotella buccae ATCC 33574]
gi|315250471|gb|EFU30467.1| competence protein ComEC [Prevotella buccae ATCC 33574]
Length = 451
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 21/174 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + I FY S W +I + I
Sbjct: 289 LFDVGFQLSFVAVLGIKLFYLP---FAHSFHFRWWLPDRILRL---------CAISISAQ 336
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + +F Y L+ N++ IP+ + ++ ++ + L F V+ L
Sbjct: 337 LTTMPLTLYYFGRFSSYFLLTNVVVIPLATLLIY-GVVLLMFLSPFP---PVFQVVREAL 392
Query: 154 ----DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ ++ I+ V + V L ++ IR +
Sbjct: 393 LLLVEKMVGAVSWIASLPGASIGDIHFNRVQVVLLYVAMLSLLLAIGRIRRVSV 446
>gi|225010075|ref|ZP_03700547.1| ComEC/Rec2-related protein [Flavobacteria bacterium MS024-3C]
gi|225005554|gb|EEG43504.1| ComEC/Rec2-related protein [Flavobacteria bacterium MS024-3C]
Length = 695
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 19/165 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF F Y +++I + + + + K + I Q + A +G G
Sbjct: 381 LFSLGFVMSYAAVASILLGMPLVESLGVPK------NKYVKKIWQLLGISLLAQLGVLG- 433
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ FH P+ L+ N+L IP + ++ I ++ ++ G
Sbjct: 434 -----PSLFSFHQFPLLFLVTNLLIIPWIGILLGLGIFTGIWWAFAKPPDLLVWLLNKGF 488
Query: 154 DIIIHIAHRISVAHN----EFCIGRIPETSFVTIVVEFLLMVFCK 194
I+ + I + + ++ FL +
Sbjct: 489 SILNNTVEWIGAQEQWILKSIYFPSSYLWAMLLLMAGFL---IWQ 530
>gi|192360228|ref|YP_001982255.1| DNA internalization-related competence protein ComEC/Rec2
[Cellvibrio japonicus Ueda107]
gi|190686393|gb|ACE84071.1| DNA internalization-related competence protein ComEC/Rec2
[Cellvibrio japonicus Ueda107]
Length = 811
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 12/210 (5%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
FD F + ++ + +S + ++ IG
Sbjct: 360 AAFDIGFWLSFIAVALLILVFSGRYEPKVGYVPFWSRTTAKGLLSGYCKSQWVMFIGLLV 419
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMA 150
S + + IP+ +AN +AIP+++F V+P L+ +L + L + A
Sbjct: 420 PLSMLV------NTIPLLSPVANFVAIPLVTFFVVPCLLLGAVLAFVSQGLGGFFLMLAA 473
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIP---ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
G+D ++ + + + + + V +L++ R G + + +
Sbjct: 474 VGIDGLMQWLDWLIGLASSWHSPTLTFSLPVAAVLGAAGLVLLLPVGLVPRWWGYVSLVM 533
Query: 208 TIIILFTF-PYSFSPDLLISEKGNLVALVD 236
I + P L I + G ALV
Sbjct: 534 GIALAVLPLPDRPELQLTILDVGQGSALVA 563
Score = 39.8 bits (91), Expect = 0.77, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 11/126 (8%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI-----PKMIYSSESHNTWTWKKISS 75
RL P G PG FD+ +G+ A GY + I + W W
Sbjct: 161 VRLKRPRGMVNPGGFDYQAWLLRRGLGATGYIVQGEPDTSDRWIPIQARIDHWRWHLQQW 220
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
++ + + + + + + G I++++AI L G +A++
Sbjct: 221 VRDNTASNNKGILVALLIGDTGGVEKSQWQQVQQTG-ISHLIAISGLHV-----GFLALV 274
Query: 136 LMILSL 141
+ L
Sbjct: 275 GYLAGL 280
>gi|332282182|ref|ZP_08394595.1| conserved hypothetical protein [Shigella sp. D9]
gi|332104534|gb|EGJ07880.1| conserved hypothetical protein [Shigella sp. D9]
Length = 780
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 325 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 373
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 374 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 427
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 428 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFL---GLKSLPEGWINIAERWQWLSF 484
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 485 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 523
>gi|238749768|ref|ZP_04611273.1| hypothetical protein yrohd0001_30880 [Yersinia rohdei ATCC 43380]
gi|238712423|gb|EEQ04636.1| hypothetical protein yrohd0001_30880 [Yersinia rohdei ATCC 43380]
Length = 720
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 68/206 (33%), Gaps = 27/206 (13%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNTWTWKKISSIK 77
+ L P +F + ++ +FY +P + + +
Sbjct: 278 ALILLCDPLAVLS-----DSFWLSCLAVFSLICWFYWVPLSPRFNTNWYGLVIRWFHLQL 332
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
L I I FH I +Y + AN+ A+P++S + +P L+A++ M
Sbjct: 333 GMMLLLIPLQISL-------------FHGISLYSIPANLWAVPLVSLITVPCVLLALIFM 379
Query: 138 ILSLDNIPFGVM-AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
+L F + L + + +S S +L M+
Sbjct: 380 LLPAIASAFWFLADMSLTAVFLPLNYLSA-----GWLYTGSASVALGYGGWLAMLIW--R 432
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPD 222
+ + IG+ ++ + ++ D
Sbjct: 433 FQWWRNYPIGVMVLCINLALFTQRRD 458
>gi|149369998|ref|ZP_01889849.1| competence protein [unidentified eubacterium SCB49]
gi|149356489|gb|EDM45045.1| competence protein [unidentified eubacterium SCB49]
Length = 675
Score = 64.8 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 74/222 (33%), Gaps = 24/222 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+F F Y + I + ++ + + +KI I +
Sbjct: 351 IFHVGFQLSYLAVFFIIWLQP---LLRDLLTSRNYFIRKIWGIV---------TVTITAQ 398
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL----LMILSLDNIPFGVM 149
+ +FH P +I N++ +P L ++ +I L + L NI ++
Sbjct: 399 LGLLPLSLYYFHQFPGLFIITNVVILPFLGLLLGAGIIIIFLALINALPEGLANIFGRII 458
Query: 150 AWGLDIIIHIAHR----ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
D I +A + F I ++ T FV V L C I S +I
Sbjct: 459 KALNDFIAWVAGQEDFLFQDIP--FSIFKVFGTYFVIFAVVLLWKQLCFKRIVLALSSII 516
Query: 206 GITIIILFTFPYSFSPDLLISEKGN--LVALVDKNTLISNYS 245
+ F S +L+I +K L+ + L+ S
Sbjct: 517 VFISVFSFDKWKSTDSELVIFQKSRTTLIGVKQSQELVVFSS 558
>gi|312898621|ref|ZP_07758011.1| ComEC/Rec2-related protein [Megasphaera micronuciformis F0359]
gi|310620540|gb|EFQ04110.1| ComEC/Rec2-related protein [Megasphaera micronuciformis F0359]
Length = 591
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 75/252 (29%), Gaps = 27/252 (10%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P + +A P +D +F + + I F + ++ S
Sbjct: 259 HSPLHILS---LVALFFLAENPFV--FYDLSFRLSFCAAAGIILFTPKTE---AALSFLP 310
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
++ + A L F +P+Y L AN+L +L +++
Sbjct: 311 VFLRRC------------TAVCIGAQIPAVPLLTGTFAGLPLYTLPANLLVGSVLDGLIV 358
Query: 128 PA--GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFVTIV 184
+A+ +M I V+ L + ++ F G + + V +
Sbjct: 359 AGLVAALAVYIMPF-FGGIILHVLKPFLWAALKTNAFLAALPYSFIPTGSMGDLLTVAYI 417
Query: 185 VEFLLM--VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI- 241
+ + + + + F+ +L + V + + N +
Sbjct: 418 LAVFAVYGTCKRKVAAFCSVFIFSAAVYTNFSHRQDRQLMVLDTLPDYTVYIKEDNGMSK 477
Query: 242 SNYSNPPSFIFS 253
Y+ F S
Sbjct: 478 MWYNKKQKFGAS 489
>gi|239637601|ref|ZP_04678573.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus warneri L37603]
gi|239596819|gb|EEQ79344.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus warneri L37603]
Length = 696
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 25/133 (18%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
K +P + + + P ++D F + IS S
Sbjct: 243 KINPLELLSIVFILMFFINPQI-----IYDIGFQFSF-LISLFLIISSP----------- 285
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+K ++ + A + I HF+ I GLI+N++ +P SF++
Sbjct: 286 --------LLKHLTGLKLIVAVTFIAQLGALLISIYHFNQIQWIGLISNLVFVPFYSFLI 337
Query: 127 IPAGLIAILLMIL 139
P ++ +L
Sbjct: 338 FPLSILFFVLSHF 350
>gi|212691034|ref|ZP_03299162.1| hypothetical protein BACDOR_00524 [Bacteroides dorei DSM 17855]
gi|212666266|gb|EEB26838.1| hypothetical protein BACDOR_00524 [Bacteroides dorei DSM 17855]
Length = 639
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 16/155 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I + Y + W+ + + +
Sbjct: 344 LFDTGFQLSFLAVFSILFIYPVIFR----------CWRVHHPVPRYIWG--IVAVSLAAQ 391
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +I F PV L AN++ P++ FV+I + + +L ++ +I V+ GL
Sbjct: 392 LGTAPVVIYKFAYFPVCFLPANLIVAPLV-FVIIYGSVASFVLSPFTVLHI--WVV-KGL 447
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
+ ++ + + + I + V L
Sbjct: 448 NGVLWLLNNSMQWVGDLPISHSGDIHLSLFQVGIL 482
Score = 39.4 bits (90), Expect = 0.88, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 68/223 (30%), Gaps = 22/223 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFN---F--SSYYKGISAIGYFYSIPKMIYSSESHNT- 67
+ R+S P PG FD+ F + GY+ K + T
Sbjct: 141 GDHLNFYTRISTPEREVIPGEFDYAAYLFRQQISGTAVIFPGYWQWTGKKSALTWKQRTG 200
Query: 68 -WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W K ++S ++ + + + + L + +++ILA+ + V
Sbjct: 201 VWREKILNSYRKWGFSGDEFAVLSALTVGYKEELSEDLRETYQVAGVSHILALSGMHIAV 260
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ GL+ +L L + V + +++ +
Sbjct: 261 L-WGLLCWILRPLDRSCLLRWVKCGIIVLLLWTFAFLVGLPPSVIR-------------- 305
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
++M T R G + + + + F + + G
Sbjct: 306 AVVMCMLMTVARAAGERTLSLNTLAIAAFFMLLYNPFYLFDTG 348
>gi|265752168|ref|ZP_06087961.1| competence protein [Bacteroides sp. 3_1_33FAA]
gi|263236960|gb|EEZ22430.1| competence protein [Bacteroides sp. 3_1_33FAA]
Length = 639
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 16/155 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I + Y + W+ + + +
Sbjct: 344 LFDTGFQLSFLAVFSILFIYPVIFR----------CWRVHHPVPRYIWG--IVAVSLAAQ 391
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +I F PV L AN++ P++ FV+I + + +L ++ +I V+ GL
Sbjct: 392 LGTAPVVIYKFAYFPVCFLPANLIVAPLV-FVIIYGSVASFVLSPFTVLHI--WVV-KGL 447
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
+ ++ + + + I + V L
Sbjct: 448 NGVLWLLNNSMQWVGDLPISHSGDIHLSLFQVGIL 482
Score = 39.8 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 29/223 (13%), Positives = 66/223 (29%), Gaps = 22/223 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFN---F--SSYYKGISAIGYFYSIPKMIYSSESHNT- 67
+ R+S P PG FD+ F + GY+ K +
Sbjct: 141 GDHLNFYTRISTPEREVIPGEFDYAAYLFRQQISGTAVIFPGYWQWTGKKSALTWKQRAG 200
Query: 68 -WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W K + + ++ + + + + L + +++ILA+ + V
Sbjct: 201 VWREKILDNYRKWGFSGDEFAVLSALTVGYKEELSEDLRETYQVAGVSHILALSGMHIAV 260
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ GL+ +L L + V + +++ +
Sbjct: 261 L-WGLLCWILRPLDRSCLLRWVKCGIIVLLLWTFAFLVGLPPSVIR-------------- 305
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
++M T R G + + + + F + + G
Sbjct: 306 AVVMCMLMTVARAAGERTLSLNTLAIAAFFMLLYNPFYLFDTG 348
>gi|323953380|gb|EGB49246.1| competence protein [Escherichia coli H252]
Length = 677
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|288924966|ref|ZP_06418902.1| ComEC/Rec2 family protein [Prevotella buccae D17]
gi|288338156|gb|EFC76506.1| ComEC/Rec2 family protein [Prevotella buccae D17]
Length = 523
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 21/174 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + I FY S W +I + I
Sbjct: 361 LFDVGFQLSFVAVLGIKLFYLP---FAHSFHFRWWLPDRILRL---------CAISISAQ 408
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + +F Y L+ N++ IP+ + ++ ++ + L F V+ L
Sbjct: 409 LATMPLTLYYFGRFSSYFLLTNVVVIPLATLLIY-GVVLLMFLSPFP---PVFQVVREAL 464
Query: 154 ----DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ ++ I+ V + V L ++ IR +
Sbjct: 465 LLLAEKMVGAVSWIASLPGASIGDIHFNRVQVVLLYVAMLSLLLAIGRIRRVSV 518
>gi|238792397|ref|ZP_04636031.1| hypothetical protein yinte0001_13250 [Yersinia intermedia ATCC
29909]
gi|238728323|gb|EEQ19843.1| hypothetical protein yinte0001_13250 [Yersinia intermedia ATCC
29909]
Length = 725
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 71/209 (33%), Gaps = 29/209 (13%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNTWTWKKISS 75
+ + L+ P +F + ++ +F+ +P + T +
Sbjct: 281 VLALILLNEPLAVLS-----DSFWLSCLAVFSLICWFHWVPIVPRFRRGWLGLTSRWFH- 334
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ I FH + ++ + AN+ A+PI+S + +P L+A+
Sbjct: 335 ------------LQFGMMLLLMPLQIGLFHGVSLFAIPANLWAVPIVSLLTVPCVLLALA 382
Query: 136 LMILS-LDNIPFGVMAWGLDIIIH-IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ L + + + + L ++ + H + S V +L ++
Sbjct: 383 CIPLPTVAGLFWFLADISLSAVLWPLNHLKAGW------LHTGSASVVVAYAGWLAILIW 436
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ S IG+ ++ + ++ D
Sbjct: 437 --RFQWWRSYPIGVIVLCVNLVLFTQRRD 463
>gi|298207548|ref|YP_003715727.1| competence protein [Croceibacter atlanticus HTCC2559]
gi|83850184|gb|EAP88052.1| competence protein [Croceibacter atlanticus HTCC2559]
Length = 679
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 48/165 (29%), Gaps = 16/165 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ +K + L P LF F Y + +I PK+
Sbjct: 325 LNLKRKTSTLNTLFLSALVILLVEPQF-----LFSVGFQLSYLAVFSIILL--QPKLSKL 377
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + + + +FH P + N++ IP
Sbjct: 378 IPRPKYYISRILWGV---------FTVTIAAQIGVLPLSLFYFHQFPGLFFVTNLIIIPF 428
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
L ++ L L ++ L + + + + ++
Sbjct: 429 LGIILGYGLLCISLALLGILPSFIAEGFRLVIGFMNSVISWVAQQ 473
>gi|210609807|ref|ZP_03288114.1| hypothetical protein CLONEX_00298 [Clostridium nexile DSM 1787]
gi|210152734|gb|EEA83740.1| hypothetical protein CLONEX_00298 [Clostridium nexile DSM 1787]
Length = 744
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 23/163 (14%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F Y I I + ++ K + + A+IG +
Sbjct: 305 DAGFLLSYGAILGILTILPAIEKLFPC--------------KYQIVKGMYASIGI--NLM 348
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGL 153
L+ + P+Y L+ NI IP++S V+ GLI L + + + + V L
Sbjct: 349 LFPVLLYFYFEFPLYSLLLNIAVIPMMS-WVLGLGLIGSLFLPICQPIGMVLVKVCGIFL 407
Query: 154 DIIIHIAHRISVAHNEFCIGRIPET----SFVTIVVEFLLMVF 192
++ ++ + P ++ V +++V
Sbjct: 408 ELFEWMSRFAGRLPGARMVFGQPAWWQISAYYLFVFGSVILVL 450
>gi|154492625|ref|ZP_02032251.1| hypothetical protein PARMER_02259 [Parabacteroides merdae ATCC
43184]
gi|154087850|gb|EDN86895.1| hypothetical protein PARMER_02259 [Parabacteroides merdae ATCC
43184]
Length = 426
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 28/197 (14%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP-KMIYSS 62
+ ++ + + + P LFD F Y + +I YF +I
Sbjct: 221 LDRRAERYNILAASAFCMLVYEPLY-----LFDIGFQLSYLAVLSILYFQPRLQALIKVH 275
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
W + + A + + +F L+ N+ + L
Sbjct: 276 NPFLRTPWGWV-------------TVTLSAQAGTTFLCLYYFGQFSTVFLLTNL-PLTFL 321
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI----IIHIAHRISVAHNEFCIGRIPET 178
+ ++IPA L+ + L +G + G++ ++ + S R
Sbjct: 322 ATLLIPASLVYMFLPEW---IPGYGWLQVGVEWLAHDLLWVVDAFSQVPGAVFSFRFDFP 378
Query: 179 SFVTIVVEFLLMVFCKT 195
+ + LL +
Sbjct: 379 AM-LVAYGMLLSILLYG 394
>gi|161984911|ref|YP_408599.2| hypothetical protein SBO_2201 [Shigella boydii Sb227]
Length = 722
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 76/221 (34%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ S+ I +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLK--SLQEGWINIAERWQW---L 456
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 457 SFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|311107078|ref|YP_003979931.1| DNA internalization-related competence protein ComEC/Rec2
[Achromobacter xylosoxidans A8]
gi|310761767|gb|ADP17216.1| DNA internalization-related competence protein ComEC/Rec2
[Achromobacter xylosoxidans A8]
Length = 779
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/260 (16%), Positives = 93/260 (35%), Gaps = 28/260 (10%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P P G F + ++ + P + W + ++ + Q+ ++
Sbjct: 323 DPWAPVSAG-----FWLSFGAVAVLLRIADAP-----VDHEAGWRRRCVARLAQATRLQL 372
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDN 143
+G + + H + + +AN +AIP+++FVV P L+ L +L
Sbjct: 373 MVTVGLTPLLAFLV------HQVSLGSPLANAVAIPVVTFVVTPLALLCAALSVLPGAQA 426
Query: 144 IPFGVMAWGL---DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTN-IR 198
+ WGL D+I+ + A + P + V + + R
Sbjct: 427 LAAFAGQWGLLAFDLIMAPVSWVGNAAWASVPVAAAPWPWLLLAVAGMAWALQVRGWPGR 486
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKNTLISNYSNPPSFIFSQ 254
H+G I + ++ + +S +G+ + + N + + P + S
Sbjct: 487 HLGWICMLP--LLFWRPDRPEPGHWRMSAMDVGQGSAILVETANQTLLFDAGPRHYGGSD 544
Query: 255 WKSALITPFHEAPHVQKEDL 274
++ PF A +++ D+
Sbjct: 545 AGERVVAPFLLARGIRQLDV 564
>gi|332093470|gb|EGI98528.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
boydii 3594-74]
Length = 722
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 76/221 (34%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ S+ I +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLK--SLQEGWINIAERWQW---L 456
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 457 SFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|158520784|ref|YP_001528654.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfococcus oleovorans Hxd3]
gi|158509610|gb|ABW66577.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfococcus oleovorans Hxd3]
Length = 840
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 13/147 (8%)
Query: 32 PGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
P LF +F + + I + + + + S + +
Sbjct: 366 PALFAVSFQLSFSAVFFIVFGMGVMQARVARISRRPVKIAANFLL-----------VSFL 414
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVM 149
+ +F+ + GL +N + +P++ FV +P GL+ ++ + ++ FG+
Sbjct: 415 AIVGTLPLTLHYFNQTSLVGLASNCILVPMVGFVAVPLGLVGVIGHMAWPPAGSLLFGMA 474
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ + +A I+ P
Sbjct: 475 GTVVQGALAVAQAIAGLPFAAAHTITP 501
>gi|320173254|gb|EFW48463.1| hypothetical protein SDB_04231 [Shigella dysenteriae CDC 74-1112]
Length = 754
Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 83/250 (33%), Gaps = 30/250 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAI +++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAITLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSP---DLLISEKGNLVA-LVDK 237
+ L+V + N R + ++ + + +++ + P + + + G +A ++ +
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPNEWQVYMLDVGQGLAMVIAR 516
Query: 238 NTLISNYSNP 247
N Y
Sbjct: 517 NGKAILYDTG 526
>gi|157369954|ref|YP_001477943.1| hypothetical protein Spro_1711 [Serratia proteamaculans 568]
gi|157321718|gb|ABV40815.1| DNA internalization-related competence protein ComEC/Rec2 [Serratia
proteamaculans 568]
Length = 737
Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 83/256 (32%), Gaps = 28/256 (10%)
Query: 1 MLSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L I + + G+ + P +F + + +++ +
Sbjct: 279 LLRIRGIHCSSWQIWLWCVGLILICDPLAVLS-----DSFWLSATAVFCLIFWFE--WVP 331
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ + W W + + I + FH + + + AN+ A+
Sbjct: 332 LNLRFRSGWHWAPLRWLH----------IQLGITLLLLPMQAGLFHGLTLGSIPANLWAV 381
Query: 120 PILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
P++S + +P L+A++ I L + + + L + H + + +
Sbjct: 382 PLVSLITVPLILLAVVAGIFPVLSAGLWRLADFTLAGVFTPLHYL-----QIGWVDLGAA 436
Query: 179 SFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVAL 234
S + +LL++F + + ++ + + + + L +
Sbjct: 437 SLAVSLAGWLLVIFWRFHWWLRYATALVTLALCCVLWREREAQYRWRVDMLDVGHGLAMV 496
Query: 235 VDKNTLISNYSNPPSF 250
++KN Y P +
Sbjct: 497 IEKNGRAILYDTGPRW 512
>gi|313675469|ref|YP_004053465.1| comec/rec2-related protein [Marivirga tractuosa DSM 4126]
gi|312942167|gb|ADR21357.1| ComEC/Rec2-related protein [Marivirga tractuosa DSM 4126]
Length = 705
Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 79/218 (36%), Gaps = 27/218 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF F Y + I +F + + + +
Sbjct: 359 LFSVGFQLSYLAVLGIVFFQPKLYGL----------LQFKYVLWDKIW--AITCVSIAAQ 406
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + + +FH P Y ++N++ IP +FV++ + L LMI+S+ + + + +
Sbjct: 407 LATAPLGLLYFHQFPTYFFLSNLVVIP-AAFVILNSSLF---LMIISIWDWAAERIGYVI 462
Query: 154 DIIIHIAHR----ISVAHNEFCIGRI---PETSFVTIVVEFLLMVFCKTNIRHIGSIMIG 206
D I + + + N G PE+ + I + F+ + + + ++ ++
Sbjct: 463 DHFIQVINYLVFSLDYLPNSTIDGIFINTPESWLIYIAIFFIALFISEKKLNYLKLAVLS 522
Query: 207 I----TIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I L + L++ + G AL KN
Sbjct: 523 LFFMSASICLRQYENFHEKKLIVYDTGKHHALAIKNGF 560
>gi|310659110|ref|YP_003936831.1| competence membrane protein [Clostridium sticklandii DSM 519]
gi|308825888|emb|CBH21926.1| putative competence membrane protein precursor [Clostridium
sticklandii]
Length = 434
Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F+ + + +IG FY T++K + + N ++
Sbjct: 266 LYDAGFTLSFMAVISIGMFYQ----------SINATFEKTKILPKYIAN--FTSMTISAQ 313
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+F I + + +N++++P+++ + P L +++L + M L
Sbjct: 314 VLTLPLTYFYFQRISIISIFSNLISVPLVT-LTYPFMLSSLVLYKIPFLGNLLVSMVKSL 372
Query: 154 DIIIH 158
I++
Sbjct: 373 KFILY 377
>gi|116749151|ref|YP_845838.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophobacter fumaroxidans MPOB]
gi|116698215|gb|ABK17403.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophobacter fumaroxidans MPOB]
Length = 846
Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/358 (11%), Positives = 104/358 (29%), Gaps = 27/358 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ D I + P+ L+ +F Y + A+ Y + + H
Sbjct: 353 RHADSLTILAATALIILVIDPAV-----LWQVSFQLTYACMVALFVIYPRLQRCRLAAIH 407
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ +++ E ++ + + +F + G IANI+ +P++ F+
Sbjct: 408 PVFGGDRMAGKITR-PFEEAFHVSVAVNILVLPLTVFYFQGFSLAGFIANIILVPLVGFL 466
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIII---HIAHRISVAHNE-FCIGRIPETSFV 181
V+P+GL+ + L+ + +++ ++ +G + H+ S F +G
Sbjct: 467 VLPSGLLGLGLLAFN-ESLAALLLQFGAWWVTLAHHLIRWFSDLSWAYFHVGPFSLLGMA 525
Query: 182 TIVVEFLLMVFCKTNIR------HIGSIMIGITIIILFTFPYSFSPDLLIS----EKGNL 231
+ +++ R + M + + + LL+ +G
Sbjct: 526 ACYLALFVLLSPWHRKRKGAALCALALFMAADSAVAHWRTAEDQRDHLLVDFIDVGQGTS 585
Query: 232 VALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQP 291
+ + F + + +
Sbjct: 586 TLVRFPDGAAMLVDGGGFF-----DDSYDIGRAVVAPFLWRSGIRRLDYVVLSHDHPDHR 640
Query: 292 RKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI-TTIRDINTKLCNVSLL 348
+ + F VGC + + ++ I L I + T +
Sbjct: 641 NGLRFVMQRFEVGCLWTGALACRPGDRESIETIAALRGIPVRLTHEIPGECAIGRCRV 698
>gi|281420921|ref|ZP_06251920.1| ComEC/Rec2 family protein [Prevotella copri DSM 18205]
gi|281405213|gb|EFB35893.1| ComEC/Rec2 family protein [Prevotella copri DSM 18205]
Length = 433
Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/207 (13%), Positives = 59/207 (28%), Gaps = 31/207 (14%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L+ + P + L P LF+ +F + +++I F++ +
Sbjct: 233 LAFHRTGLPLNTLASAYIFMLLISPLY-----LFELSFQLSFLAVASILLFFTPLYTLLP 287
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S W + ++ F I Y L+ N +AIP
Sbjct: 288 IRSRF-IRWAWG-----------LLCVSLAAQIGTLPVIVYSFGRISCYSLLTNYIAIPA 335
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI-----------IIHIAHRISVAHNEF 170
+ ++ + IL L+L V+A + + + IS+
Sbjct: 336 ATLILYLGAAL-ILFSPLTLWAPIAPVVAPLISLTSGALTSITQFLNTAIKLISMLPGAS 394
Query: 171 --CIGRIPETSFVTIVVEFLLMVFCKT 195
+ + L+ +
Sbjct: 395 IENVKISLPQVIGLYAIILLVYALWRR 421
>gi|284920764|emb|CBG33827.1| putative competence-related protein [Escherichia coli 042]
Length = 754
Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP ++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPQVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVAHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|328957259|ref|YP_004374645.1| DNA channel for uptake in competent cells [Carnobacterium sp. 17-4]
gi|328673583|gb|AEB29629.1| DNA channel for uptake in competent cells [Carnobacterium sp. 17-4]
Length = 730
Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 86/224 (38%), Gaps = 19/224 (8%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ +IG+ S + + + SI + I + + L HF
Sbjct: 281 VFSIGFQLSYLLSLALILFSTSLFNQSKYSIINNLY------ISFVLTLISIPVLSFHFF 334
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM----AWGLDIIIHIAH 161
G+ AN+L +P+ ++ ++P ++ + + F + L +I +
Sbjct: 335 EFSWIGMFANLLFVPLFTWFIMPLMILLFFSSYIFSGTLFFHFLIDLAECSLGMIEWLVL 394
Query: 162 RISVAH-NEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+I + G++P F+ + + ++ + + +M+ IT+ I+F +
Sbjct: 395 KIRLFPYGTIVTGKVPLMLFIVTTMVLITFLIALEQQKKRKRVLMLLITVFIVFIQYQKY 454
Query: 220 SP--DLLISE--KGNLVALVDKNTL---ISNYSNPPSFIFSQWK 256
SP ++LI + +G+ + + + + +F +W+
Sbjct: 455 SPFGEVLILDVGQGDATLIKEPFGRGVYLIDTGGALAFEKEEWQ 498
>gi|193212454|ref|YP_001998407.1| ComEC/Rec2-related protein [Chlorobaculum parvum NCIB 8327]
gi|193085931|gb|ACF11207.1| ComEC/Rec2-related protein [Chlorobaculum parvum NCIB 8327]
Length = 728
Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/251 (10%), Positives = 68/251 (27%), Gaps = 23/251 (9%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+I +K P + + I L P PG F + I Y +
Sbjct: 337 TIGRKSYPLNSLAAADLIILLFNPLELLSPG-----FQMTNAAVVGILTIYPWLSSLIPD 391
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + F + ++ + + +F G+IAN +P++
Sbjct: 392 GDGV------LRKVAHFFWSAF--SVSLAAMIGIAPVIAWYFGTYAPSGIIAN---VPVV 440
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR----ISVAHNEFCIGRIPET 178
F + + ++ + + ++A +
Sbjct: 441 FFSSMAMYASFPMALLHGFGGGVAELFGLSSWLFANVALWFVELFNRLPFASIEVHPDLF 500
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
V + +L ++ + + + + L + P + + +V +
Sbjct: 501 GVVVFYLTVVLALYALVSKAWGRLAVSVLIGLNLLLWHEVIRP---VPDSPRMVTVNAGR 557
Query: 239 TLISNYSNPPS 249
+ S+
Sbjct: 558 DMALLLSSGSE 568
>gi|330686114|gb|EGG97735.1| DNA internalization competence protein ComEC/Rec2-like protein
[Staphylococcus epidermidis VCU121]
Length = 728
Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 44/133 (33%), Gaps = 25/133 (18%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
K +P + + + P +D F + IS S
Sbjct: 275 KINPLELLSIVFILMFFINPQIV-----YDIGFQFSF-LISLFLVISSP----------- 317
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+KQ ++ + A + I HF+ I GLI+N++ +P SF +
Sbjct: 318 --------LLKQLSGLKLIIEVTFIAQLGALLISIYHFNQIQWIGLISNLVFVPFYSFFI 369
Query: 127 IPAGLIAILLMIL 139
P ++ +L
Sbjct: 370 FPLAILFYILSHF 382
>gi|324328229|gb|ADY23489.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 773
Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 77/256 (30%), Gaps = 24/256 (9%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 270 LYMILAGASPSVIRASITGVFMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISFISQLVSTPILLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH- 167
+ NIL +P LS VV+P LI I ++ + V++ GL++
Sbjct: 382 IFLNILYVPFLSLVVLPCSIVILICIPIIPFLAKRLGN-VLSIGLNLSNDFLSYCENLPF 440
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
G+ P V + ++ G + I + + + + P E
Sbjct: 441 TRLNFGQTPILLVALYCVSIISILMVWERRMTKGILFISAGVFLFISTCHYVYP--YFRE 498
Query: 228 KGNLVALVDKNTLISN 243
G++ L
Sbjct: 499 SGSVTFLDVGQGDAIL 514
>gi|238898331|ref|YP_002924012.1| DNA internalization-related competence protein with
metallo-beta-lactamase domain [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|229466090|gb|ACQ67864.1| DNA internalization-related competence protein with
metallo-beta-lactamase domain [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 773
Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 85/244 (34%), Gaps = 29/244 (11%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI-PKMIYSSE 63
KK + + + P +F ++A+ ++Y P + +
Sbjct: 308 RKKCTAWQVWLWTVSLILIIDPLAILS-----DSFWLSCFAVAALIFWYQWVPLRLSENR 362
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ W + + L + + FH I + LIAN+ A+PI+S
Sbjct: 363 TWYQWLRQLLMKWLHLQLGMMLLL---------LPIQVALFHGISLSSLIANLWAVPIIS 413
Query: 124 FVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
F+ IPA L+A L + + +I + + + + ++ +S I + +
Sbjct: 414 FITIPAILLAFLTTFIPF-IASIFWFLADFSIGLVFSPLLFLSK-----GWLSISKAGQL 467
Query: 182 TIVVEFLLMVFCKTN-IR---HIGSIMIGITIIILFTFPYSFSPDLLIS--EKGNLVALV 235
+L ++ + R I ++ I + I + + G+ +A+V
Sbjct: 468 ISYSGWLAVIIWRFQFWRSHHIISVVIFCILLWIFTERSEYKRYKWRVDMLDVGHGLAVV 527
Query: 236 DKNT 239
+
Sbjct: 528 IERG 531
>gi|332885335|gb|EGK05586.1| hypothetical protein HMPREF9456_02787 [Dysgonomonas mossii DSM
22836]
Length = 657
Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 52/175 (29%), Gaps = 25/175 (14%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ +K A L P LFD + + +I Y +
Sbjct: 318 VRRKSFSIHALFIAAFFMFLVNPF-----SLFDIGLQLSFMSVLSILY------LHPKMS 366
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
K I I Q F + + + +F P Y +AN++ +P++S
Sbjct: 367 GLMKIENKYIRYIWQMFA------LSLVAQLATFPICLYYFGTFPTYFFVANLIIVPVVS 420
Query: 124 FVVIPAGLIAILLMI--------LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
++ AG I M+ L +P + + + + H
Sbjct: 421 LIMYVAGGIVFAKMLSFVFPDFSYYLYYLPVKALQALVSFMTYTIHLFEQLPFAL 475
>gi|262408250|ref|ZP_06084797.1| competence protein [Bacteroides sp. 2_1_22]
gi|294643617|ref|ZP_06721420.1| ComEC/Rec2-like protein [Bacteroides ovatus SD CC 2a]
gi|294806134|ref|ZP_06764986.1| ComEC/Rec2-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|298480268|ref|ZP_06998466.1| competence protein [Bacteroides sp. D22]
gi|262353802|gb|EEZ02895.1| competence protein [Bacteroides sp. 2_1_22]
gi|292641051|gb|EFF59266.1| ComEC/Rec2-like protein [Bacteroides ovatus SD CC 2a]
gi|294446648|gb|EFG15263.1| ComEC/Rec2-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|298273549|gb|EFI15112.1| competence protein [Bacteroides sp. D22]
Length = 697
Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 56/168 (33%), Gaps = 19/168 (11%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++ + P+ LFD F + +++I IY
Sbjct: 329 MVGREPLSLNTLAVAAWLMLFCNPAW-----LFDVGFQLSFLAVASILLIQKP---IYHL 380
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + K + + ++ + ++ +F V+ L+ N++ IP++
Sbjct: 381 ITVKSRIGKHVWGL---------MSVSVAAQIGTAPLVLFYFSRFSVHFLLTNLVVIPLI 431
Query: 123 SFVVIPAGLIAILLMILSLDNIPFG-VMAWGLDIIIHIAHRISVAHNE 169
+ ++ A ++ +LL S I + L+ + +
Sbjct: 432 TIILY-AAVVMLLLTPFSWLQIGVAGGVKKLLEGLNFFVRWVERLPCA 478
>gi|330811014|ref|YP_004355476.1| Competence protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379122|gb|AEA70472.1| Competence protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 748
Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 92/291 (31%), Gaps = 27/291 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ DP+ A + P PG F + ++ + + +
Sbjct: 299 KQPDPWWAWLLAFVGVLVFDPLASLRPG-----FWLSFAAVAILMFTFGARLGP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ + ++ + + G + N+LA+P +S +
Sbjct: 348 ----WRWWQTWTRAQWLVALGLCPLLLIVGLP---------VSLSGPLVNLLAVPWISLL 394
Query: 126 VIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V+P L+ L+ + L + LD++ ++ + +P +
Sbjct: 395 VLPLALLGTALLPVPLMGEGLLWIAGGLLDLLFKGLALVAGRMPAWVPAAVPPWALGIAA 454
Query: 185 VEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL-IS 242
L++ K +R +G M+ + + ++ + G +A++ +
Sbjct: 455 FGAFLLLLPKGVPLRVLGWPMVLLMVFPPQEHLPQGHAEIWQLDVGQGLAVLVRTRRHAL 514
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRK 293
Y P F + ++ P V++ DL + + + R
Sbjct: 515 LYDAGPRFGEADAGERVVLPTLRKLGVRRLDLMLLSHADADHAGGARAVRN 565
>gi|312131661|ref|YP_003999001.1| comec/rec2-related protein [Leadbetterella byssophila DSM 17132]
gi|311908207|gb|ADQ18648.1| ComEC/Rec2-related protein [Leadbetterella byssophila DSM 17132]
Length = 617
Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/217 (15%), Positives = 77/217 (35%), Gaps = 20/217 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F Y + I F+ I + + S+ + A++ +
Sbjct: 310 LYDVGFQLSYLAVWGILSFHPILHK------SIRIGNRVLRSLWEG------ASVSISAT 357
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH P Y L+AN + + ++ L+ ++ I + + + L
Sbjct: 358 LFTLPLSLYYFHQFPNYFLLANTAVNLVCAPLLPIGLLLLLIYPINWMFEWVGFIFKFLL 417
Query: 154 DIIIHIAHRISVAHNEFC--IGRIPETSFVTIVVEFLLMVFCKTN-----IRHIGSIMIG 206
I+ + + I T V ++ F ++ F K G + +
Sbjct: 418 IILNRVVEFFAGLPGAVSKDIYISMFTVLVLFLILFSVIHFWKRRTSLGLWGLTGGVFLL 477
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ +++ + S LLI E G + + ++ L+ +
Sbjct: 478 FSELLVQNYLESNRGKLLIYEGGLSL-IQGRDLLVVD 513
>gi|323976700|gb|EGB71788.1| competence protein [Escherichia coli TW10509]
Length = 754
Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L ++ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLIVEQGVWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|289649331|ref|ZP_06480674.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 734
Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 76/217 (35%), Gaps = 26/217 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S W S ++
Sbjct: 310 VLIFEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGAWNWWQSWTRAQ 354
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL- 139
+ + + I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 355 WLIAIGLLPILLALNLP---------ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVS 405
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + L+ + ++ + +P +++ ++ +++ K +R
Sbjct: 406 GVGEGLLWLAGGALEWLFMFLGWVAAVLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMR 465
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+G ++ + + + ++L + G +A++
Sbjct: 466 LLGWPLLLLCVFPPLDSVPAGQVEVLQLDVGQGLAIL 502
>gi|115378648|ref|ZP_01465799.1| DNA internalization-related competence protein ComEC/Rec2
[Stigmatella aurantiaca DW4/3-1]
gi|115364360|gb|EAU63444.1| DNA internalization-related competence protein ComEC/Rec2
[Stigmatella aurantiaca DW4/3-1]
Length = 908
Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/170 (10%), Positives = 48/170 (28%), Gaps = 4/170 (2%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGS 93
D + + + ++ + + +++ I I +
Sbjct: 356 DLSLQLSFLAVMSLLLLTPALRGAVPIAPPDAQEKRRLVRIAGQARETILETFCASVAVT 415
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
++ + F + GLI+NI+ +P+ + A A L + L AW
Sbjct: 416 VASLPLVASAFGRASLAGLISNIVCLPLCGLLTGFAAGGAALFTVAPVLATPVLWGGAWT 475
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
++++ + + + + + R G
Sbjct: 476 SEVLLVLTRFFAAVPLATVDLPPFGAVTTLLYAAGLGAWALGTGRWRFAG 525
>gi|289624519|ref|ZP_06457473.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|330869286|gb|EGH03995.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 734
Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 76/217 (35%), Gaps = 26/217 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S W S ++
Sbjct: 310 VLIFEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGAWNWWQSWTRAQ 354
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL- 139
+ + + I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 355 WLIAIGLLPILLALNLP---------ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVS 405
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + L+ + ++ + +P +++ ++ +++ K +R
Sbjct: 406 GVGEGLLWLAGGALEWLFMFLGWVAAVLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMR 465
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+G ++ + + + ++L + G +A++
Sbjct: 466 LLGWPLLLLCVFPPLDSVPAGQVEVLQLDVGQGLAIL 502
Score = 36.7 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 78/253 (30%), Gaps = 16/253 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ +L P+G P FD+ + I AIG + + + ++
Sbjct: 119 SGERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGAIGTVVDGQLLTPARGAWRDLIRQR 178
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+ ++ A + + S + ++L I ++ +
Sbjct: 179 LLAVDAQGREGGLAALVLGDGSGLSSTDWQVLQDTGTV----HLLVISGQHIGLLAGVIY 234
Query: 133 AILLMILSLDNIPFGVMAWGLDIIIH--IAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
A++ L L + I+ G ++V +L
Sbjct: 235 ALVA---GLARWGLWP--RALPWLPWACALAFIAALGYGLLAGFEVPVRRACVMVAMVL- 288
Query: 191 VFCKTNIRHIGSIMIGIT---IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+ RH+G + + +++F + P +S + ++ + + ++
Sbjct: 289 -LWRLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLSFAAVGILVLIFSGRLGAWNWW 347
Query: 248 PSFIFSQWKSALI 260
S+ +QW A+
Sbjct: 348 QSWTRAQWLIAIG 360
>gi|256020959|ref|ZP_05434824.1| hypothetical protein ShiD9_18722 [Shigella sp. D9]
Length = 754
Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFL---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|315924406|ref|ZP_07920628.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoramibacter alactolyticus ATCC 23263]
gi|315622285|gb|EFV02244.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoramibacter alactolyticus ATCC 23263]
Length = 731
Score = 63.7 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 61/193 (31%), Gaps = 21/193 (10%)
Query: 3 SITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
ITK++ D A I P L+ +F + + I Y ++Y
Sbjct: 261 RITKRHVDRLSALCVAAMIILAVAPYQ-----LWSVSFQMSFGAVLGIILLY--RPLVYR 313
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + QS I A IG + +F + V GL+ N+L +P+
Sbjct: 314 VTRGLDIRSRCGKWLVQSIGLTIAATIG------TLPATLYYFQTVNVIGLVGNLLVVPL 367
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMA-------WGLDIIIHIAHRISVAHNEFCIGR 174
+ ++I A ++ LM+ ++ + L + + +
Sbjct: 368 VGILLILAFVVIPFLMVFPELAQVMVILPSLLAKFIFALTDRLRALAFFNFHGGALSLAA 427
Query: 175 IPETSFVTIVVEF 187
++
Sbjct: 428 FLLIVMFALLAAG 440
>gi|312110157|ref|YP_003988473.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y4.1MC1]
gi|311215258|gb|ADP73862.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y4.1MC1]
Length = 761
Score = 63.7 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/318 (13%), Positives = 89/318 (27%), Gaps = 43/318 (13%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
P A + + L P + F +F + I S P ++
Sbjct: 301 MLSPLDALSVALIVMLLFDPY-LLWDVGFQLSFIVSFALI------LSSPMIMSY----- 348
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
S + SA FL+ +F + ++ L N++ +P+ SFV+
Sbjct: 349 -----------HSVAFRLFFTT-FIAQLSALPFLLYYFFEVSLWSLPLNVIFVPLYSFVI 396
Query: 127 IPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIH---IAHRISVAHNEFCIGRIPETSF 180
+P + ++L ++ + +I +A S +GR
Sbjct: 397 LPLSIASLLAYYAHPF-FSIPFMWLLQKII--VISSDIVALFSSSRSLSLILGRPSFFFL 453
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT- 239
V V LL R++ + + I PY G +V L
Sbjct: 454 VCYAVAILLAFVQMERKRYLSLGWVALVIAFHAFSPYMDRY-------GEVVLLDVGQGD 506
Query: 240 --LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI 297
I ++ + ++ D+ + + K +
Sbjct: 507 CLYIELPYRKGVYLIDTGGTLPRQGEPWQERKREWDVGKDVVVPFLKSKGVRHIDKLIAT 566
Query: 298 KKSFCVGCHRSDVIVGVL 315
+++I +
Sbjct: 567 HGDIDHIGAAAEIIHHLS 584
>gi|312792992|ref|YP_004025915.1| DNA internalization-related competence protein comec/rec2
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312876460|ref|ZP_07736444.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor lactoaceticus 6A]
gi|311796818|gb|EFR13163.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor lactoaceticus 6A]
gi|312180132|gb|ADQ40302.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 752
Score = 63.3 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 59/159 (37%), Gaps = 20/159 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I + D + + L P LFD F + + +I FY
Sbjct: 305 IYRNPDTLNSLAVSSALMLLVNPLF-----LFDIGFQLSFLSVLSIILFYKR-------- 351
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
++ + +K + + +F + + + NI+A+P+
Sbjct: 352 -----IYEYFAKLKIPRGVSSLIAVSISAQILILPLMAYYFSEVSIISFLTNIVAVPVAG 406
Query: 124 FVVIPAGLIAILLMILSLDNIPF-GVMAWGLDIIIHIAH 161
VV +GL+ + ++ ++D +PF + + ++++++
Sbjct: 407 AVVP-SGLLYFIFLVFNIDILPFKWFLEVCVKVLMYLSK 444
>gi|302391371|ref|YP_003827191.1| DNA internalization-related competence protein ComEC/Rec2
[Acetohalobium arabaticum DSM 5501]
gi|302203448|gb|ADL12126.1| DNA internalization-related competence protein ComEC/Rec2
[Acetohalobium arabaticum DSM 5501]
Length = 775
Score = 63.3 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 47/130 (36%), Gaps = 20/130 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+K + + + + I + P P +F + + +I Y
Sbjct: 321 RKVNIYNILSLVAVIILIYNPYYLLRP-----SFQLSFMVVYSIIYL------------- 362
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++ + + A+I A L+ HF+ I +I NIL +P++S +
Sbjct: 363 TPVLQRRLFFLPSFVARVLAASI--AAQLGAFPILVYHFNRISFGPIIGNILVMPVVSLI 420
Query: 126 VIPAGLIAIL 135
+ + ++
Sbjct: 421 IFLGFISLLV 430
>gi|206976054|ref|ZP_03236964.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus H3081.97]
gi|222097770|ref|YP_002531827.1| DNA internalization-related competence protein comec/rec2 [Bacillus
cereus Q1]
gi|206745806|gb|EDZ57203.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus H3081.97]
gi|221241828|gb|ACM14538.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Q1]
Length = 773
Score = 63.3 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 85/281 (30%), Gaps = 33/281 (11%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P ++ G+ RLS + + F Y + IG+
Sbjct: 270 LYMILAGASPSVIRASLTGVFMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISFISQLVSTPILLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH- 167
+ NIL +P LS VV+P LI I ++ + V++ GL++
Sbjct: 382 IFLNILYVPFLSLVVLPCSIVILICIPIIPFLAKRLGN-VLSIGLNLSNDFLSYCENLPF 440
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP------ 221
G+ P V + ++ G + I + + + + P
Sbjct: 441 TRLNFGQTPILLVALYCVSIISILMVWERRMTKGILFISAGVFLFISTCHYVYPYFRESG 500
Query: 222 --DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 501 SVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 541
>gi|167570510|ref|ZP_02363384.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia oklahomensis C6786]
Length = 639
Score = 63.3 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/349 (12%), Positives = 98/349 (28%), Gaps = 31/349 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS--- 62
+ P G L P PG F + ++AI + S +
Sbjct: 142 RSLAPSSVLAAALGCVLLVDPWAVTAPG-----FWLSFGAVAAILFVSSGRSAARDAREA 196
Query: 63 ----------ESHNTWTWKKISSIKQSFLNEIRANI---------GTYGSASASIFLIKH 103
+ + + + ++ + + + + + +
Sbjct: 197 NDGRGARVAIDGGDGVPPSRAARLRTACARAMTRLARRVRDAARAQYAVTIALAPLTVLW 256
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F IP+ G +AN AIP + +V P L ++L LD I F + ++ +
Sbjct: 257 FAQIPLAGPLANAFAIPWVGSLVTPTVLAGVVL-PAPLDAIAFAFAHALVATLMRLLEAT 315
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFTFPYSFSP 221
+ A + +P + ++ RH + + P +
Sbjct: 316 AGAGRTVWMLPMPGGLALATAAAGVVWALTPRGWPLRHAAPLAWLPLLAPASHAPPEGAF 375
Query: 222 DLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQS 280
L + G A++ + + P S ++ PF A V+ D + +
Sbjct: 376 RLTALDVGQGSAVLIETARHALLFDAGPGPEASNAGERVVVPFLRAQGVRALDALVVSHA 435
Query: 281 SLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
+ + + + + + + L C
Sbjct: 436 DSDHAGGAPAVLESVAVAQMTGGLPPSNRLWRAARTAGVTDALPCAAGQ 484
>gi|254491574|ref|ZP_05104753.1| DNA internalization-related competence protein ComEC/Rec2
[Methylophaga thiooxidans DMS010]
gi|224463052|gb|EEF79322.1| DNA internalization-related competence protein ComEC/Rec2
[Methylophaga thiooxydans DMS010]
Length = 749
Score = 63.3 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 27/205 (13%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + ++ I + + W W I +
Sbjct: 332 GFWLSFSAVALIVF------TCSNRYPKQRWNWAGIHLW---------------IAVGLI 370
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG---LD 154
L+ F I V IAN +A+P++SF+V+P L ++++I+S + + ++ LD
Sbjct: 371 PLLVLFFGQISVISPIANFIAVPLVSFLVVPIILFGMVMLIVS-EPLARWLLNNADYLLD 429
Query: 155 IIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIIL 212
++ ++ + +++ +P + + +L++ + + + I++
Sbjct: 430 LMWQWLRLLANSPISDWHSPFLPIVMIGFVAIAVILILLPRGWPAKWLALILLLPIWFYQ 489
Query: 213 FTFPYSFSPDLLISEKGNLVALVDK 237
P S L + + G +A V +
Sbjct: 490 PDKPESGEFYLSVLDVGQGLATVIE 514
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 70/195 (35%), Gaps = 14/195 (7%)
Query: 6 KKYDPFP-AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP--KMIYSS 62
+ +P+P A + RL PP G + PG FD+ + + I A GY +++ +
Sbjct: 112 RASNPYPNAGEHWQFTVRLKPPRGMSNPGSFDYEKWLFTQRIGATGYVRDSTSNQLLQHA 171
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI---FLIKHFHCIPVYGLIANILAI 119
+ ++ ++ L + + I H+ + G +++LAI
Sbjct: 172 SVWDVNRLRQQLQVRLKKLLPDAEQLPLLQGLAIGIRDDLDDSHWQTLRQTG-TSHLLAI 230
Query: 120 PILSFVVIPAGLIAIL-----LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
L + A +L LM L +P + L +I +A + +
Sbjct: 231 SGLHIGLAAAIGFFLLRFLWSLMPSLLLRVPAHYVG-ALGGVI-LAAFYACLAGFTVPTQ 288
Query: 175 IPETSFVTIVVEFLL 189
TI++ +
Sbjct: 289 RAFVMVATIMLALVW 303
>gi|297622796|ref|YP_003704230.1| DNA internalization-related competence protein ComEC/Rec2 [Truepera
radiovictrix DSM 17093]
gi|297163976|gb|ADI13687.1| DNA internalization-related competence protein ComEC/Rec2 [Truepera
radiovictrix DSM 17093]
Length = 796
Score = 63.3 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 73/204 (35%), Gaps = 16/204 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD +F Y + I F + ++ L A +
Sbjct: 363 LFDLSFQLSYGSVMGILLFAG-----PTLRRLLGARAASLAWWHPGTLLVGGAVVSASAQ 417
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGLIAILLMIL--SLDNIPFGV 148
A F+ HF+ +P++G + N++A+P+ + +V AGL ++ + L +L + +
Sbjct: 418 ALTLPFVAHHFNLVPLFGPLVNVVAVPLATLLVPLGFLAGLAGLVSLPLAEALGALASPL 477
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR-HIGSIMIGI 207
+I ++ + P V + + +R G +++
Sbjct: 478 AG----AMIAVSALAAPWPQVTWGELEPIGFLYFGVGALAAALVAQGRLRPWRGLLVVAA 533
Query: 208 TIII-LFTFPYSFSPDLLISEKGN 230
+I T P+ +L+ + G
Sbjct: 534 AMIASSLTPPFYGHAELVFFDVGQ 557
>gi|327253703|gb|EGE65332.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli STEC_7v]
Length = 754
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 71/223 (31%), Gaps = 26/223 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ + Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFLYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L ++ + + L ++ + +
Sbjct: 402 TVPLILAAMVMHLSGPLIVEQGVWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ L+V + N R + ++ + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRALPAMCVAGGLLMCWPLWQKPRPDAW 499
>gi|294341901|emb|CAZ90330.1| putative DNA internalization-related competence protein ComEC/Rec2
[Thiomonas sp. 3As]
Length = 871
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 9/169 (5%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI--YSSESHNTWT 69
L P F + + + + + +
Sbjct: 402 DVIALALTAVLLWDPWAVR-----QAGFWLSFVAVG-MLFVAGNRRHPETAALACGPGEA 455
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + A+ + + + F I V +AN LAIP+++ VV P
Sbjct: 456 APAGRLQRGAQALRRAAHSQWVATIALLPLTLLFFQQIAVLSPLANALAIPVVTLVVAPL 515
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+ +LL LD + + AW + + H+++ P+
Sbjct: 516 AVGGLLL-PAPLDGWAWRLGAWVQQGLDAVLHQMADWPLAQWHAAAPDG 563
>gi|229157940|ref|ZP_04286012.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 4342]
gi|228625500|gb|EEK82255.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 4342]
Length = 693
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/213 (17%), Positives = 70/213 (32%), Gaps = 27/213 (12%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 LYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESSNGVIRNSIY------ISLISQLVSTPILLYHFGYFSPYS 301
Query: 112 LIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+ NIL +P LS +V+P LI I ++ + V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIVILICIPIIPFFAKRLA-DVLSIGLNLSNDFLIYCESLP- 359
Query: 169 EFCIGRIPETSFVTIVVEFL----LMVFCKTNI 197
F +TS + + + + +++ + +
Sbjct: 360 -FTRLNFGQTSILLVALYCVSIVSILMVWERRM 391
>gi|160872317|ref|ZP_02062449.1| DNA internalization-related competence protein ComEC/Rec2
[Rickettsiella grylli]
gi|159121116|gb|EDP46454.1| DNA internalization-related competence protein ComEC/Rec2
[Rickettsiella grylli]
Length = 782
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 60/200 (30%), Gaps = 23/200 (11%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + FYSI + S +W I S
Sbjct: 355 SFWLSFFAV--FLIFYSISNRLKSFNKWESW-----------------CRIQITLSLGLI 395
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVV--IPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ FH I AN++AIP++ F++ + + L+ L +I + L+
Sbjct: 396 PLSLLFFHQISWVSFFANLIAIPLIGFIILPLSLFGSLLSLISFRLGSISLILSEHLLEF 455
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT--NIRHIGSIMIGITIIILF 213
+ I S + + +L++ R +G I
Sbjct: 456 LWKILRFCSEIPFTQYHSYLSMRWIFIASLIAVLLLLGPKGIPGRWLGFIWALPLFFFEA 515
Query: 214 TFPYSFSPDLLISEKGNLVA 233
P + + + G +A
Sbjct: 516 KGPQQGDVWIHLLDVGQGLA 535
>gi|225567875|ref|ZP_03776900.1| hypothetical protein CLOHYLEM_03948 [Clostridium hylemonae DSM
15053]
gi|225163353|gb|EEG75972.1| hypothetical protein CLOHYLEM_03948 [Clostridium hylemonae DSM
15053]
Length = 742
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 59/193 (30%), Gaps = 29/193 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ YD A + + P L+D F + + + K +
Sbjct: 259 RHYDAPTALSAAAVTVLVWRPLH-----LYDGGFWLSFGAVFGAAVILPLFKKLP----- 308
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + +I S L+ +F+ P+Y L N+L +P++S +
Sbjct: 309 -------VQGLWANVSIQI----------SILPVLLYYFYEFPLYSLFLNLLVVPLMSVL 351
Query: 126 VIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTI 183
+ + +I L F V L + I + G+ P V
Sbjct: 352 LFLGLAGSAAGLIAELPGEAVFTVCRMILKLYEWICRTAAAFPAARIITGKPPLAGVVCY 411
Query: 184 VVEFLLMVFCKTN 196
+ ++ +
Sbjct: 412 YILLAFVLLMWSR 424
>gi|166032762|ref|ZP_02235591.1| hypothetical protein DORFOR_02477 [Dorea formicigenerans ATCC
27755]
gi|166027119|gb|EDR45876.1| hypothetical protein DORFOR_02477 [Dorea formicigenerans ATCC
27755]
Length = 790
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 58/193 (30%), Gaps = 11/193 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ YD A + + + P ++D F + + A+ +M +
Sbjct: 271 RHYDSVTALSVAAAVVLIWRPL-----SIYDGAFWLSFFAVFAVVVIMPAGQMEKAKTRT 325
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
K + + ++ F+ P+Y N+L IP+++ +
Sbjct: 326 EIDIQKNRENKAWIIQIKSMIISNIEMQLFLLPVVLYFFYEFPLYATFLNLLVIPLMTIL 385
Query: 126 VIPAGLIAILLMIL-SLDNIPFGVM----AWGLDIIIHIAHRISVAHNE-FCIGRIPETS 179
+ + + M+ + IP M + L I IGRI
Sbjct: 386 LSLGITGSFICMLCSGMFKIPGKCMLVICGFILTIYERCCEFFLELPGARVVIGRIKIWQ 445
Query: 180 FVTIVVEFLLMVF 192
+ +++
Sbjct: 446 ILFYYGCVVVICV 458
>gi|23099434|ref|NP_692900.1| late competence protein [Oceanobacillus iheyensis HTE831]
gi|22777663|dbj|BAC13935.1| late competence protein (DNA binding and uptake) [Oceanobacillus
iheyensis HTE831]
Length = 769
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 76/252 (30%), Gaps = 38/252 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
KK+ + + L P G F F+F+ + G S
Sbjct: 312 KKKFLYIDIFSFVFMSLILFDPYVIYELG-FQFSFAVTF------GILLSA--------- 355
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W S++ I + + +F+ ++ N++ IP +F
Sbjct: 356 --KWITHSTSTLWNIV------QISFVSQMAILPLQLHYFYIFQPLSILLNVIIIPYFTF 407
Query: 125 VVIPAGLIAILLMILS------LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+VIP IA L LDN + + + ++ + +S +
Sbjct: 408 LVIPFMYIATLFSFFPKHLLLILDNSFQWIHSIVVAFLVWVDTYLSFPLLMSGLSIAAVF 467
Query: 179 SFVTIVVEFLL-MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
++ F+ + + + + ++ + +II P +S++G +
Sbjct: 468 AYYIFFFRFMYELELKRMKMAFLSGVLFCLPVIIGALKP-------YVSDEGIVTMFDIG 520
Query: 238 NTLISNYSNPPS 249
P
Sbjct: 521 QGDAILIETPYR 532
>gi|323490044|ref|ZP_08095265.1| ComE operon protein 3 [Planococcus donghaensis MPA1U2]
gi|323396340|gb|EGA89165.1| ComE operon protein 3 [Planococcus donghaensis MPA1U2]
Length = 744
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/217 (11%), Positives = 69/217 (31%), Gaps = 31/217 (14%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
F + + P ++ F Y I Y ++ + I S
Sbjct: 285 FSLANIMLTSMLIFVLWDPY--AMYKIGFQLSYGATFGIIYSLNMLRTIQSP-------- 334
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ I + L+ HF+ + + + N L +P+ + V++PA
Sbjct: 335 -----------IKAGFVITFISQVTLYPLLLFHFYELSLSAFVVNSLFVPLFTVVILPAN 383
Query: 131 LIAILLMILSLDN-----IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ + L + L + + +D+++ + ++ + + P +++
Sbjct: 384 FLLLCLTAVFLPAANFVFYFYEPLRQQVDVLM---NGLASLPYQLWVPGKPGLGIFVLLM 440
Query: 186 EFL--LMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + R +++ + ++ PY
Sbjct: 441 SSVYFFYCAVERKFRWRYLLILIVPALLFTLMPYMDP 477
>gi|295399241|ref|ZP_06809223.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus thermoglucosidasius C56-YS93]
gi|294978707|gb|EFG54303.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus thermoglucosidasius C56-YS93]
Length = 761
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/318 (13%), Positives = 88/318 (27%), Gaps = 43/318 (13%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
P A + + L P + F +F + I S P ++
Sbjct: 301 MLSPLDALSVALIVMLLFDPY-LLWDVGFQLSFIVSFALI------LSSPMIMSY----- 348
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
S + S FL+ +F + ++ L N++ +P+ SFV+
Sbjct: 349 -----------HSVAFRLFFTT-FIAQLSVLPFLLYYFFEVSLWSLPLNVIFVPLYSFVI 396
Query: 127 IPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIH---IAHRISVAHNEFCIGRIPETSF 180
+P + ++L ++ + +I +A S +GR
Sbjct: 397 LPLSIASLLAYYAHPF-FSIPFMWLLQKII--VISSDIVALFSSSRSLSLILGRPSFFFL 453
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT- 239
V V LL R++ + + I PY G +V L
Sbjct: 454 VCYAVAILLAFVQMERKRYLSLGWVALVIAFHAFSPYMDRY-------GEVVLLDVGQGD 506
Query: 240 --LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI 297
I ++ + ++ D+ + + K +
Sbjct: 507 CLYIELPYRKGVYLIDTGGTLPRQGEPWQERKREWDVGKDVVVPFLKSKGVRHIDKLIAT 566
Query: 298 KKSFCVGCHRSDVIVGVL 315
+++I +
Sbjct: 567 HGDIDHIGAAAEIIHHLS 584
>gi|126642645|ref|YP_001085629.1| competence factor involved in DNA uptake [Acinetobacter baumannii
ATCC 17978]
Length = 787
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 66/215 (30%), Gaps = 19/215 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P F F Y + Y +
Sbjct: 319 LLLKQPIKPFTLLVYSASLLLLIDPFSV-----FSAGFWLSYGACFILLRIYQTIAQLPE 373
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + K F++++ + S + F I + NI+A+PI
Sbjct: 374 QHFLSLSS-------KMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 426
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 427 VGGVIVPLNIMAACAWFVIKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTP 484
Query: 178 TSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIII 211
S + I +++ K + + G + +I+
Sbjct: 485 LSLLAISFAIIILFLPKGILPKTWGILCCLPLVIM 519
>gi|313905052|ref|ZP_07838422.1| DNA internalization-related competence protein ComEC/Rec2
[Eubacterium cellulosolvens 6]
gi|313470122|gb|EFR65454.1| DNA internalization-related competence protein ComEC/Rec2
[Eubacterium cellulosolvens 6]
Length = 793
Score = 63.3 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 74/196 (37%), Gaps = 15/196 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YDP A + I LS P+ + G F + ++ I Y
Sbjct: 288 AAEKSYDPVCALSAAAIILLLSNPNCLFYEG-----FQLSFAAVAGISVIY-----PALL 337
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLIKHFHCIPVYGLIANILAIPI 121
+T W+K S K+ I A++ S + + +F IP++ N+L +P
Sbjct: 338 SCVSTSFWRKGSKKKRLLEKLIEASLAYLAVSLATLPLVAWYFFQIPLWSFAVNLLLVPA 397
Query: 122 LSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPET 178
++ VV+ G + L ++S L + + L + + + + + GR
Sbjct: 398 MT-VVMALGTAGLSLAMVSPALGRLLLVPVDLILQLYTVVTGLVRWLPSSMWICGRPDFR 456
Query: 179 SFVTIVVEFLLMVFCK 194
V + L VF +
Sbjct: 457 QLVFYYLLLLGWVFYR 472
>gi|117921026|ref|YP_870218.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. ANA-3]
gi|117613358|gb|ABK48812.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. ANA-3]
Length = 773
Score = 62.9 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/264 (12%), Positives = 74/264 (28%), Gaps = 26/264 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + I L P G F + ++ I Y I E
Sbjct: 296 RRYSSAWDRLLFALFIVLLLDPLACLSAG-----FWLSFCALAIILYTLESAPRIQPVEG 350
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ T+ K + Q + + R ++ + F + V+ L N+L +P S
Sbjct: 351 NATFRAKARGRLAQFWSIQWRLSLVL------GLVQAVFFGGLSVHSLWMNMLVVPWFSL 404
Query: 125 VVIPAGLIAILLMILS--LDNIPFGVMAWGLDIII---HIAHRISVAHNEFCIGRIPETS 179
+VIP ++A +L + L F + ++ + +
Sbjct: 405 IVIPLSMLAFILWWVGTLLGQAWFALFHLADLTLLPYGKLLELSGDLPAHWHSVSETLLG 464
Query: 180 FVTIVVEFLLM----------VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
+ L++ + + I + + L+
Sbjct: 465 ASLCALLALILWRYLPHHSRYGLWHLPLALLFIPFILVIFPRVTESSSPQWTLHLLDVGQ 524
Query: 230 NLVALVDKNTLISNYSNPPSFIFS 253
L +++++ Y +F
Sbjct: 525 GLAVVIEQDKRALIYDTGAAFGED 548
>gi|312135645|ref|YP_004002983.1| DNA internalization-related competence protein comec/rec2
[Caldicellulosiruptor owensensis OL]
gi|311775696|gb|ADQ05183.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor owensensis OL]
Length = 752
Score = 62.9 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 59/155 (38%), Gaps = 20/155 (12%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+P + + P LFD F + + +I FY
Sbjct: 308 NPDTLNSLAVSSVLML----LVNPLFLFDVGFQLSFLSVLSIILFYKG------------ 351
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
++ + +K + + +F + V + NI+A+P+ S VV
Sbjct: 352 -IYEYFAKLKIPRGVSSLIAVSISAQILILPLMAYYFSEVSVISFLTNIVAVPVASAVVP 410
Query: 128 PAGLIAILLMILSLDNIPF-GVMAWGLDIIIHIAH 161
+GL+ + +I ++D +PF + ++++I+++
Sbjct: 411 -SGLMYFIFLIFNIDILPFKWFLEVCVNVLIYLSR 444
>gi|217961815|ref|YP_002340385.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH187]
gi|229141063|ref|ZP_04269605.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST26]
gi|217066299|gb|ACJ80549.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH187]
gi|228642341|gb|EEK98630.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST26]
Length = 773
Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 77/256 (30%), Gaps = 24/256 (9%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P ++ G+ RLS + + F Y + IG+
Sbjct: 270 LYMILAGASPSVIRASLTGVFMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISFISQLVSTPILLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH- 167
+ NIL +P LS VV+P LI I ++ + V++ GL++
Sbjct: 382 IFLNILYVPFLSLVVLPCSIVILICIPIIPFLAKRLGN-VLSIGLNLSNDFLSYCENLPF 440
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
G+ P V + ++ G + I + + + + P E
Sbjct: 441 TRLNFGQTPILLVALYCVSIISILMVWERRMTKGILFISAGVFLFISTCHYVYP--YFRE 498
Query: 228 KGNLVALVDKNTLISN 243
G++ L
Sbjct: 499 SGSVTFLDVGQGDAIL 514
>gi|317505312|ref|ZP_07963240.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315663526|gb|EFV03265.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 505
Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 43/138 (31%), Gaps = 14/138 (10%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPK-MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
L+D +F + ++ I Y +Y + W W I
Sbjct: 344 MLWDISFQLSFMAVAGILIAYKPLFYAVYPTNCLLRWAWG-------------MICISLS 390
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
L+ +F Y L+ N + IP + ++ A L + ++I +L +M
Sbjct: 391 AQMLTFPLLLHYFGNFATYFLLTNFIVIPAATAILYLALLAFVSMLIPALQTWIINLMTM 450
Query: 152 GLDIIIHIAHRISVAHNE 169
+ IS
Sbjct: 451 IAGWMNTAVTTISHLPYA 468
>gi|300722538|ref|YP_003711828.1| putative recombination protein with metallo-hydrolase domain
[Xenorhabdus nematophila ATCC 19061]
gi|297629045|emb|CBJ89630.1| putative recombination protein with metallo-hydrolase domain
[Xenorhabdus nematophila ATCC 19061]
Length = 781
Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 78/247 (31%), Gaps = 31/247 (12%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
+ P +F + + A+ +++ + W+W + ++
Sbjct: 341 AALILFFDPLAVLS-----DSFWLSFTAVMALLFWFHWMPLPEKIRHGWQWSWLRGLHMQ 395
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ + F + + L+AN+ A+PI+SF+ +P + ++ +
Sbjct: 396 LGMMLMLLPLQLLL------------FQGVNIASLVANLWAVPIISFISVPLVMSGLICI 443
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI---PETSFVTIVVEFLLMVFCK 194
L + ++ + ++A +F+ ++ + L+V +
Sbjct: 444 FLPVVQPFLWQ-------LVDYSVSFALAPLSVLTYSWIETGYYAFIMTLLGWFLVVIWR 496
Query: 195 TNI----RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
N + + +I IG+T ++ L ++DK + +
Sbjct: 497 LNWWKSYKWLLAISIGVTACYSIPANEHQWRFSMLDVGHGLSVVIDKGGKAIIFDTGNRW 556
Query: 251 IFSQWKS 257
Sbjct: 557 ETGSMAE 563
>gi|297516028|ref|ZP_06934414.1| hypothetical protein EcolOP_00170 [Escherichia coli OP50]
Length = 531
Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 76 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 124
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 125 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 178
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 179 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAECWQWLSF 235
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 236 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 274
>gi|170769259|ref|ZP_02903712.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia albertii TW07627]
gi|170121911|gb|EDS90842.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia albertii TW07627]
Length = 754
Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 73/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSSWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W +++ + ++ + I FH I + +AN+ AIP+++F+
Sbjct: 348 ---VWSLPPTLRTAVS---LIHLQLGITLLLLPIQIVMFHGISLTSFLANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ + ++ + + L ++ + +
Sbjct: 402 SVPLILAAMIVHLSGPIIVEQWLWLIADRSLALLFWA---LKNLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPD 222
+LL++ + R + ++ + I++ + PD
Sbjct: 459 SP--WLLLIIWRFNAWRTLPAVCLAGGIMMCWPLWQKPRPD 497
>gi|258516435|ref|YP_003192657.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum acetoxidans DSM 771]
gi|257780140|gb|ACV64034.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum acetoxidans DSM 771]
Length = 789
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 66/198 (33%), Gaps = 22/198 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF+ F + G FY +P ++ + + + + +
Sbjct: 339 LFNPGFQLSFLATW--GIFYLVPAIVAFLQQKLGISKRMAAV----------LAVPLAAE 386
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWG 152
A + HF+ I + +AN++ +P++ + + + L L+ LSL A
Sbjct: 387 AVTLPPVALHFNLIALVAPLANVVCVPLVGAITLFSALGTTAGLLSLSLTQFINITTACL 446
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---CKTNI------RHIGSI 203
LDI + + F P + + +++ + + R +
Sbjct: 447 LDIFLWLVKLFQHLPGAFVHTAAPPVWAIILWYLLVILSVNKEWRGWLGRRLPDRMLRPA 506
Query: 204 MIGITIIILFTFPYSFSP 221
+ + + + +F P
Sbjct: 507 GVLLFVATMLSFSSGLHP 524
>gi|118479491|ref|YP_896642.1| DNA internalization-related competence protein [Bacillus
thuringiensis str. Al Hakam]
gi|118418716|gb|ABK87135.1| DNA internalization-related competence protein [Bacillus
thuringiensis str. Al Hakam]
Length = 773
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 270 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 381
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 382 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 439
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 440 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 498
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 499 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 541
>gi|52141179|ref|YP_085650.1| DNA internalization-related competence protein [Bacillus cereus
E33L]
gi|51974648|gb|AAU16198.1| DNA internalization-related competence protein [Bacillus cereus
E33L]
Length = 773
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 88/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 270 IYMILAGASPSVMRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 381
Query: 112 LIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+ NIL +P LS +V+P LI + ++ L V++ GL++
Sbjct: 382 IFLNILYVPFLSLIVLPCSIIILICMPIIPF-LAKSFANVLSIGLNLSNDFLSYCESLP- 439
Query: 169 EFCIGRIPETSFVTIVVEFL----LMVFCKTNIR------HIGSIMIGITIIILFTFPYS 218
F +T + + + + +++ + I G + T ++ +
Sbjct: 440 -FTRLNFGQTPILLVALYCVSIISVLMVWERRISKGMMFIFAGIFLFISTGHYVYPYFRE 498
Query: 219 FSPDLLIS-EKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ +G+ + + D+ + + +W+
Sbjct: 499 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 541
>gi|228935645|ref|ZP_04098459.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228824005|gb|EEM69823.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 693
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 301
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 359
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 360 FTRLNFGQTPILLVALYCVSIFSVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 418
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 419 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 461
>gi|196034371|ref|ZP_03101780.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus W]
gi|195992913|gb|EDX56872.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus W]
Length = 693
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 301
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 359
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 360 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 418
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 419 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 461
>gi|170707463|ref|ZP_02897917.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0389]
gi|190566917|ref|ZP_03019833.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis Tsiankovskii-I]
gi|229604357|ref|YP_002868614.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0248]
gi|170127707|gb|EDS96580.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0389]
gi|190561908|gb|EDV15877.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis Tsiankovskii-I]
gi|229268765|gb|ACQ50402.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0248]
Length = 692
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 301
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 359
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 360 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 418
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 419 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 461
>gi|228916957|ref|ZP_04080518.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228842678|gb|EEM87765.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 693
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 301
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 359
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 360 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 418
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 419 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 461
>gi|228929369|ref|ZP_04092392.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228830275|gb|EEM75889.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 693
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 301
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 359
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 360 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 418
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 419 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 461
>gi|228948038|ref|ZP_04110323.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228811624|gb|EEM57960.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
Length = 693
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 301
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 359
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 360 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 418
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 419 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 461
>gi|229123864|ref|ZP_04253057.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 95/8201]
gi|228659578|gb|EEL15225.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 95/8201]
Length = 693
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 301
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 359
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 360 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 418
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 419 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 461
>gi|225012320|ref|ZP_03702756.1| ComEC/Rec2-related protein [Flavobacteria bacterium MS024-2A]
gi|225003297|gb|EEG41271.1| ComEC/Rec2-related protein [Flavobacteria bacterium MS024-2A]
Length = 672
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 22/191 (11%)
Query: 32 PGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
P L F Y + I Y + K + + + W KKI ++ + A
Sbjct: 342 PFLRAIGFQLSYLAVFGILGIYPLLKKL---WNPSNWFLKKIWNLAAISIAAQIAV---- 394
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILS-FVVIPAGLIAILLMILSLDNIPFGVMA 150
S I +FH P L++NI+ +P F+ + ++ +L+ S + + F
Sbjct: 395 -----SPISIYYFHQFPSLFLLSNIIILPFFGAFLSLSLIILFAILLNFS-NPLLFQFYD 448
Query: 151 WGLDIIIHIAHRISVAHNEF--CIGRIPETSFVT---IVVEFLLM---VFCKTNIRHIGS 202
G+D + I + ++ I ++F+ I++ L F K +
Sbjct: 449 IGVDCLNKIINWVAQQEAFLFENIYYSASSTFLLYCIIILAVLFFYKKTFLKGTWVLLFI 508
Query: 203 IMIGITIIILF 213
++ +I+
Sbjct: 509 LVFISNLILEA 519
>gi|196044739|ref|ZP_03111973.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 03BB108]
gi|196024227|gb|EDX62900.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 03BB108]
Length = 693
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 301
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 359
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 360 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 418
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 419 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 461
>gi|313633201|gb|EFS00079.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
seeligeri FSL N1-067]
Length = 693
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 92/233 (39%), Gaps = 16/233 (6%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR-------ANIGT 90
S + I S I +F P +IY ++ + + I
Sbjct: 242 WSSFSIICISFILFFIIQPYVIYEVGFQLSYAVSFGIILSSRGILAKLQHPLSKSLAISF 301
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGV 148
+ +SI ++ HF+ G+ N+L +PI + ++P + +LL S L IP +
Sbjct: 302 VSTMMSSIVMMYHFYSFSWVGIFFNLLYVPIFTIFILPGCFLVLLLSFTSSALLIIPEKL 361
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIG 206
+ + + II + + ++ + P T+ + ++V +L++F + + ++
Sbjct: 362 LTFFIQIIESTTNLFAKIPHQTIVTGRPTTTVLILLVIVVLLLFYQWQKKSFPVFLLICF 421
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVAL---VDKNTLISNYSNPPSFIFSQWK 256
+ + TF ++ + +G+ + + ++ + + F+ +W
Sbjct: 422 ACLCYISTFNFNGKVSFIDVGQGDSILIQLPRNQGNYLIDTGGQLPFVKEEWA 474
>gi|65321697|ref|ZP_00394656.1| COG0658: Predicted membrane metal-binding protein [Bacillus
anthracis str. A2012]
gi|227817101|ref|YP_002817110.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. CDC 684]
gi|227007070|gb|ACP16813.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. CDC 684]
Length = 722
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 220 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 277
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 278 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 331
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 332 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 389
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 390 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 448
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 449 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 491
>gi|301055817|ref|YP_003794028.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis CI]
gi|300377986|gb|ADK06890.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus biovar anthracis str. CI]
Length = 773
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 270 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 381
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 382 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 439
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 440 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 498
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 499 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 541
>gi|49481367|ref|YP_038379.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|254721916|ref|ZP_05183705.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A1055]
gi|49332923|gb|AAT63569.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 773
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 270 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 381
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 382 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 439
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 440 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 498
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 499 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 541
>gi|221134262|ref|ZP_03560567.1| DNA internalization-related competence protein ComEC/Rec2
[Glaciecola sp. HTCC2999]
Length = 702
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 69/203 (33%), Gaps = 33/203 (16%)
Query: 29 PAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
+FP F+ F + +SAI K + S+ + I
Sbjct: 239 VSFPLSSFNTGFWLSFLAVSAISI-------------IVHCLSKSVRSLWDKVMAFI--M 283
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-------S 140
I + I F I + ++AN+ AIPI++ ++P G++ + + ++ S
Sbjct: 284 IQIALTILLFPINIVVFGQIFPWSILANLWAIPIVTLFLVPVGMMLLCVYLIKIQYDISS 343
Query: 141 LDNI---PFGVMAWGLDIIIHIAHRISVAHNEFCIGRI------PETSFVTIVVEFLLMV 191
D+I ++ G + +I H ++ + P ++ ++
Sbjct: 344 FDSIINGGMWLLNMGFNGLISGLHMMTQFPILSTVFAPVNISLDPVWCVALLM-GIVVFF 402
Query: 192 FCKTNIRHIGSIMIGITIIILFT 214
R G ++ I +
Sbjct: 403 VFYKQWRLWGWCLLLIPAGMSVW 425
>gi|317499483|ref|ZP_07957749.1| competence protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893257|gb|EFV15473.1| competence protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 729
Score = 62.9 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 71/216 (32%), Gaps = 33/216 (15%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAI-GYFYSIPKMIYSSESHNTWTWKKISSI 76
GI L P ++D F + + I Y PKM K +
Sbjct: 310 AGIVLLI--MCPYR--IYDTGFLYSFTAVFVIAIYQLVKPKMKG-----------KYYKL 354
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
K+S I IG +I + P + +AN+ A+P+ + A L+ L
Sbjct: 355 KESLSFCIFIQIG------MLPLIIYFQYEAPAFSFLANVAAVPLATCAFTLAFLLIFL- 407
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIP-ETSFVTIVVEFLLMVFCK 194
P+ V + +I IS IG +P + + L +
Sbjct: 408 --------PYTVFHEAISWMIQGVLWISRQSYGMLTIGHVPFLWVLLFYFMTGLWIWKKN 459
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
RHI + + +IIL P + L + G
Sbjct: 460 GQNRHIRISLAYVIMIILIWIPMARRKSLAFLDVGQ 495
>gi|323140376|ref|ZP_08075306.1| DNA internalization competence protein ComEC/Rec2-like protein
[Phascolarctobacterium sp. YIT 12067]
gi|322415132|gb|EFY05921.1| DNA internalization competence protein ComEC/Rec2-like protein
[Phascolarctobacterium sp. YIT 12067]
Length = 701
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 47/172 (27%), Gaps = 24/172 (13%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + + + + + + A + +
Sbjct: 271 DIGFQLSFGAAAGLLWLLPACQRLLPQALPAPIGE--------------AAAVSLAAQLA 316
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ +F + L++NI+ +P+L + L+ LL + + AW
Sbjct: 317 VLPLEVYYFQQFSLIALVSNIVLVPVLE-IAAQLALVGALLPVCG--EYLLQLAAWLTAQ 373
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFL------LMVFCKTNIRHI 200
++ A + IG++P V + F R
Sbjct: 374 VLTQARFFADLPYSTVVIGKLPAYCLVLYYAALFVWADFPWLQFWSNRERRC 425
>gi|261880091|ref|ZP_06006518.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333246|gb|EFA44032.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 518
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/169 (9%), Positives = 56/169 (33%), Gaps = 19/169 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ + + P L+D F + + I +Y I+
Sbjct: 326 VVLGRQRASINTLAFAALVMLVVNPL-----SLWDVGFQMSFMAVLGILVYYRP---IFH 377
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + + + + ++ +F Y ++ NI+ +P
Sbjct: 378 ALTLQNTAVRWLWGL---------TVVSLSAQIGTAPLVMYYFGRFACYSILTNIIVVPA 428
Query: 122 LSFVVIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ ++ ++ +L M +++ + M + ++ + I+
Sbjct: 429 ATLILY-GAVLMLLAMPVVAVQKMITMAMVYVSGLLNTLLGHIARLPGA 476
>gi|218960725|ref|YP_001740500.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
gi|167729382|emb|CAO80293.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
Length = 769
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 77/259 (29%), Gaps = 23/259 (8%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
++ I LSP LF+ + + I Y ++ + N +K
Sbjct: 304 TLALSLFIITLLSPLQ------LFNIGLQLSFVSVLVIFYGLPNFRLFSRDKILNNPFYK 357
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
++ ++ L + S + + F + +F + G+I N L IP+ ++ + L
Sbjct: 358 VLNDLQDGIL------LSALISIAITPFTLYYFGTASLNGIIGNTLGIPLSGILLPLSFL 411
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL-M 190
+ I L I V + I + + + V L
Sbjct: 412 VLITPQSWYLTKIFVIVYRAVNILWIRWMQFCYNLPFSLSANYLSLFQAIALAVVILWGF 471
Query: 191 VFCKTNIRHI--GSIMIGITIIILFTFPYSFSPDLLIS------EKGNLVALVDKNTLIS 242
+ + I + + + P P+ + L+ + T++
Sbjct: 472 FLIRGKFKFALQAVIPMSLLVTGFMLIPTWQKPEASVYIYNCGVGDCTLIRFANGETMLI 531
Query: 243 NYS--NPPSFIFSQWKSAL 259
+ F + +
Sbjct: 532 DTGGTKKKGFAENILTKSD 550
>gi|239501009|ref|ZP_04660319.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB900]
Length = 810
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 66/215 (30%), Gaps = 19/215 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P G F Y + Y +
Sbjct: 342 LLLKQPIKPFTLLVYSASLLLLMDPFSVLSAG-----FWLSYGACFILIRIYQTIAQLPE 396
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + K F++++ + S + F I + NI+A+PI
Sbjct: 397 QHFLSLSS-------KMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 449
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 450 VGGVIVPLNIMAACAWFVIKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTP 507
Query: 178 TSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIII 211
S + I +++ K + + G + +I+
Sbjct: 508 LSLLAISFAIIILFLPKGILPKTWGILCCLPLVIM 542
>gi|260914323|ref|ZP_05920792.1| recombination protein 2 [Pasteurella dagmatis ATCC 43325]
gi|260631424|gb|EEX49606.1| recombination protein 2 [Pasteurella dagmatis ATCC 43325]
Length = 806
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 69/197 (35%), Gaps = 19/197 (9%)
Query: 1 MLSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L +++ + + I I P +F + ++ +Y + +
Sbjct: 301 LLRLSRLHYSAWQLFFRIVAILLFYDPLMCLSS-----SFWLSLGAVISLIIWYQLFPL- 354
Query: 60 YSSESHNTWTWKKISS--IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
S W K + ++ ++ + + F I GL AN++
Sbjct: 355 ----SLLHWRGKPLEQSVWRKVRWLLSLFHLQIGLFFLFAPVQLLMFGGISWGGLFANLI 410
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
A+P+ SF+++P L ++ + W ++ I +S ++ +
Sbjct: 411 AVPLYSFILVPIILFTLVTQNYFITW------RWANVLVEQITQWLSYLTEQWLQISTWQ 464
Query: 178 TSFVTIVVEFLLMVFCK 194
T + + + + ++F +
Sbjct: 465 TYLIIVFLTSIFILFLR 481
>gi|30264396|ref|NP_846773.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Ames]
gi|47529847|ref|YP_021196.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. 'Ames Ancestor']
gi|49187219|ref|YP_030471.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Sterne]
gi|165872029|ref|ZP_02216669.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0488]
gi|167638533|ref|ZP_02396809.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0193]
gi|177653305|ref|ZP_02935557.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0174]
gi|254736430|ref|ZP_05194136.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Western North America USA6153]
gi|254750906|ref|ZP_05202945.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Vollum]
gi|254757766|ref|ZP_05209793.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Australia 94]
gi|30259054|gb|AAP28259.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Ames]
gi|47504995|gb|AAT33671.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. 'Ames Ancestor']
gi|49181146|gb|AAT56522.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Sterne]
gi|164712160|gb|EDR17697.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0488]
gi|167513381|gb|EDR88751.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0193]
gi|172081587|gb|EDT66659.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0174]
Length = 772
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 270 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 381
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 382 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 439
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 440 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 498
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 499 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 541
>gi|167766650|ref|ZP_02438703.1| hypothetical protein CLOSS21_01156 [Clostridium sp. SS2/1]
gi|167711773|gb|EDS22352.1| hypothetical protein CLOSS21_01156 [Clostridium sp. SS2/1]
gi|291558664|emb|CBL37464.1| DNA internalization-related competence protein ComEC/Rec2
[butyrate-producing bacterium SSC/2]
Length = 729
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 71/216 (32%), Gaps = 33/216 (15%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAI-GYFYSIPKMIYSSESHNTWTWKKISSI 76
GI L P ++D F + + I Y PKM K +
Sbjct: 310 AGIVLLI--MCPYR--IYDTGFLYSFTAVFVIAIYQLVKPKMKG-----------KYYKL 354
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
K+S I IG +I + P + +AN+ A+P+ + A L+ L
Sbjct: 355 KESLSFCIFIQIG------MLPLIIYFQYEAPAFSFLANVAAVPLATCAFTLAFLLIFL- 407
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIP-ETSFVTIVVEFLLMVFCK 194
P+ V + +I IS IG +P + + L +
Sbjct: 408 --------PYTVFHEAISWMIQGVLWISRQSYGMLTIGHVPFLWVLLFYFMTGLWIWKKN 459
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
RHI + + +IIL P + L + G
Sbjct: 460 GQNRHIRISLAYVIMIILIWIPMARRKSLAFLDVGQ 495
>gi|117623131|ref|YP_852044.1| YcaI [Escherichia coli APEC O1]
gi|115512255|gb|ABJ00330.1| YcaI [Escherichia coli APEC O1]
Length = 621
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPD 497
>gi|282896498|ref|ZP_06304518.1| Probable competence protein [Raphidiopsis brookii D9]
gi|281198604|gb|EFA73485.1| Probable competence protein [Raphidiopsis brookii D9]
Length = 779
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 77/257 (29%), Gaps = 24/257 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + T +++ + F I ++ +
Sbjct: 367 IWDLGFQLSFLATLGLMV-------------TATPITQRLDWLPPLFATLI--SVPLAAT 411
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
L+ F + +Y + NI+A P++S + I + ++ ++LS L + +
Sbjct: 412 IWTLPLLLHIFSTVAIYSVPLNIIATPLISIISIGGMISGLVSLLLSDLGGYVASFLYYP 471
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVF---CKTNIRHIGSIMIGIT 208
I+I +A IG I + I + + G I +
Sbjct: 472 AHILIKMAEFFDHLPGNSLNIGSISIWQMLIIYGLIVATCLVPWWQKRWLLAGLIATILA 531
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN----YSNPPSFIFSQWKSALITPFH 264
+I ++ + + L++ V ++ ++ F +
Sbjct: 532 VIPIWYYTSNLLKITLLATNSEPVLVIQDRGQVTLINSGDPGTGRFTILPFLRQQGINHI 591
Query: 265 EAPHVQKEDLQEKNQSS 281
+ N S
Sbjct: 592 DWAISTNFSGDANNSWS 608
>gi|189501873|ref|YP_001957590.1| hypothetical protein Aasi_0450 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497314|gb|ACE05861.1| hypothetical protein Aasi_0450 [Candidatus Amoebophilus asiaticus
5a2]
Length = 706
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 51/181 (28%), Gaps = 13/181 (7%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
F +F Y + I Y W K +Q + ++
Sbjct: 359 FSVSFQLSYLAVLGIIYLQPK---------IYGWFNFKNIVFRQ---LWLWTSVSLAAQL 406
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ + + +FH P Y + +N + +P F+ I + + L ++ +
Sbjct: 407 ATTPISLYYFHQFPTYFIFSNWVVVPAAFFIFILGLCVLFTCWWVKLSVYIAWILEYLAG 466
Query: 155 IIIHIAHRISVAHNEFCI-GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
++ IS I + + ++ + I ++L
Sbjct: 467 LVNQFVAWISSLPYSVVFDIYIHTQDLLLWYGLIISVLVFLAKRKFWLLWPISSIAVLLS 526
Query: 214 T 214
Sbjct: 527 I 527
>gi|254684082|ref|ZP_05147942.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. CNEVA-9066]
Length = 773
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 270 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 381
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 382 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 439
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 440 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 498
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 499 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 541
>gi|319792890|ref|YP_004154530.1| DNA internalization-related competence protein comec/rec2
[Variovorax paradoxus EPS]
gi|315595353|gb|ADU36419.1| DNA internalization-related competence protein ComEC/Rec2
[Variovorax paradoxus EPS]
Length = 779
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 82/253 (32%), Gaps = 27/253 (10%)
Query: 1 MLSITKKYDPFP-AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L +T + P+P + P F + + +
Sbjct: 319 LLRLTGRRWPWPHVWLLTAAVVVALDPWALM-----QAGFWLSFVAVGV---------LF 364
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ S ++ + R + + L+ F + + GL+AN +AI
Sbjct: 365 ATDSSTTEAGERRKPTAGSRLFLFFREQWVITLALTPLSLLL--FQQVSLVGLLANAIAI 422
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
P ++ VV P + ++ L + V AW + + + + P
Sbjct: 423 PWVTLVVTPLAMGGAVVTPL------WDVAAWAVQALAVLLQWSAGLPFATLSMAAPPWW 476
Query: 180 FVT--IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALV 235
+ LL + ++R +G ++ ++ P + +LL ++ +GN V +
Sbjct: 477 MAACGVAGGALLAMHLPWSMRALGLPLLLPVLLWQMPRPAAGEFELLAADIGQGNAVLVR 536
Query: 236 DKNTLISNYSNPP 248
+ + P
Sbjct: 537 TAKHSLLYDTGPR 549
>gi|77460399|ref|YP_349906.1| DNA internalization-like competence protein ComEC/Rec2 [Pseudomonas
fluorescens Pf0-1]
gi|77384402|gb|ABA75915.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 747
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 25/176 (14%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
L P PGL + ++ + + + +
Sbjct: 314 VLLMDPLASLRPGL-----WLSFVAVAVLIFTFGG-------------RLGPWRWWQTWT 355
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ IG A I + G +AN+LA+P +SF V+P L+ LL+ +
Sbjct: 356 RAQWLIAIGLCPVLLALSLP------ISLSGPLANLLAVPCVSFAVLPPALLGTLLLPIP 409
Query: 141 -LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + +D + I+ + IP + LL++ +
Sbjct: 410 YVGEGLLWLAGGLIDGLFRALALIAGRWPAWIAASIPGWVLALGCIGALLLLLPRG 465
Score = 39.8 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 84/255 (32%), Gaps = 14/255 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ +L P G P FD+ + I A G ++ + +
Sbjct: 121 IKSGERWRLAVKLKRPGGLLNPDAFDYEAWLLAQRIGATGTVKDGQRLAPAQWAWRDSIR 180
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+++ ++ N A + + + ++L I ++ A
Sbjct: 181 QRLLAVDAQGRNGALAALVLGDGSGLGREDWQILQDTGTV----HLLVISGQHIGLLAAL 236
Query: 131 LIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
+ A++ + L + + W L +A ++ + +P +V L
Sbjct: 237 MYALV---VGLARVGIWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVRRACVMVA---L 290
Query: 190 MVFCKTNIRHIGS---IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN 246
++ + RH+G+ +++ ++L S P L +S V + + +
Sbjct: 291 VLLWRLRFRHLGAWWPLLLAFDGVLLMDPLASLRPGLWLSFVAVAVLIFTFGGRLGPWRW 350
Query: 247 PPSFIFSQWKSALIT 261
++ +QW A+
Sbjct: 351 WQTWTRAQWLIAIGL 365
>gi|12514082|gb|AAG55398.1|AE005281_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13360455|dbj|BAB34419.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209748608|gb|ACI72611.1| hypothetical protein ECs0996 [Escherichia coli]
gi|209748610|gb|ACI72612.1| hypothetical protein ECs0996 [Escherichia coli]
gi|209748612|gb|ACI72613.1| hypothetical protein ECs0996 [Escherichia coli]
Length = 780
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 325 RQWSGWDVWICCLAAILLMDPVVILSQSL-----WLSAAAVAALIFWYQWFPCP------ 373
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 374 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 427
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L LD + + L ++ + +
Sbjct: 428 TVPLILAAMVVHLSGPLILDQGLWFLADRSLALLFL---GLKSLPEGWINIAERWQWLSF 484
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 485 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 523
>gi|198276886|ref|ZP_03209417.1| hypothetical protein BACPLE_03091 [Bacteroides plebeius DSM 17135]
gi|198270411|gb|EDY94681.1| hypothetical protein BACPLE_03091 [Bacteroides plebeius DSM 17135]
Length = 590
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/218 (8%), Positives = 67/218 (30%), Gaps = 24/218 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+++ + + + P LFD +F + + +I FY +
Sbjct: 263 FCSEERFSGMHSLVLAAFLMLIYNPFF-----LFDISFQLSFTAVFSILAFYP---LFSR 314
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + ++ F++ +F P Y L+ N++ + +
Sbjct: 315 WLCIKNCVLRYVWN---------TLSLSISAQLGTLPFILYYFGSFPTYFLLVNLVVVIL 365
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI---GRIPET 178
+++ + + + + + ++ W ++ + +
Sbjct: 366 AGGILMLTLVALCVASVPMVGSTVMTLLEWCTSVLNESTRWVQQLDGSQITSVYLSFSQA 425
Query: 179 SFVTIVVEFLLMVFCKTNIR----HIGSIMIGITIIIL 212
+ +V+ + + R I +M+ +++
Sbjct: 426 CLLIVVIICFYLCWASGIHRKASDWIRLLMVCNLFVVV 463
>gi|298372067|ref|ZP_06982057.1| ComEC/Rec2 family protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298274971|gb|EFI16522.1| ComEC/Rec2 family protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 692
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 60/182 (32%), Gaps = 14/182 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKM-IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LF+ F Y + AI YF + T+ W+ ++
Sbjct: 352 LFNVGFQLSYSALLAILYFQPKIAKWLVFKNRILTYCWE-------------LTSVSIAA 398
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
A+ + +FH P Y L++N + +P+ ++ + I I + +I ++
Sbjct: 399 QLGAAPLCLYYFHQFPNYFLLSNFIGVPLSGIIIYLDVALLITNSIPMIGSIVSWLLVTT 458
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++ I I + I + I++ ++ ++ I+
Sbjct: 459 TKLMYGGLQIIENLPFVTTNIWIDSVQLILIYASVFAIGLLMYKIKYKYFLLFFVSAILF 518
Query: 213 FT 214
F
Sbjct: 519 FG 520
>gi|229086896|ref|ZP_04219055.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-44]
gi|228696406|gb|EEL49232.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-44]
Length = 722
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 24/177 (13%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + A L P +FD F + I + S ++++
Sbjct: 252 ISSLDALSTTAILMLIYDPYM--VFDIGFQFSF--IGSFALLLSSKRLLHHDNGI----- 302
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
I+ + I + + +++ L HF Y + N++ +P LS +V+P
Sbjct: 303 -----IRNTIYLSIISQL------ASTPILFYHFGYFSPYSIFLNLIYVPFLSCIVLPCS 351
Query: 131 LIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++ L + + ++ L I F + S +V+
Sbjct: 352 IVIFLCALFVPFVSTWLAHGLSVCLIFSNEILQYCENLP--FIRLIFGQASLFLVVL 406
>gi|193078092|gb|ABO13027.2| competence factor involved in DNA uptake [Acinetobacter baumannii
ATCC 17978]
Length = 810
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 66/215 (30%), Gaps = 19/215 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P F F Y + Y +
Sbjct: 342 LLLKQPIKPFTLLVYSASLLLLIDPFSV-----FSAGFWLSYGACFILLRIYQTIAQLPE 396
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + K F++++ + S + F I + NI+A+PI
Sbjct: 397 QHFLSLSS-------KMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 449
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 450 VGGVIVPLNIMAACAWFVIKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTP 507
Query: 178 TSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIII 211
S + I +++ K + + G + +I+
Sbjct: 508 LSLLAISFAIIILFLPKGILPKTWGILCCLPLVIM 542
>gi|119470092|ref|ZP_01612858.1| putative DNA internalization-related competence protein ComEC/Rec2
with Metallo-beta-lactamase superfamily domain
[Alteromonadales bacterium TW-7]
gi|119446513|gb|EAW27787.1| putative DNA internalization-related competence protein ComEC/Rec2
with Metallo-beta-lactamase superfamily domain
[Alteromonadales bacterium TW-7]
Length = 755
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 85/246 (34%), Gaps = 24/246 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ + + I P PGL+ F+F + + +I +
Sbjct: 320 RQLMRWRSILFALVIVLAVNPFNTLNPGLY-FSF---FAVVVIFL-------VIKNVPHF 368
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
K + ++ I F+ + V GL+ N++AIP LSF+
Sbjct: 369 TNSFLKVLFAL---------ITIQASLFIGLLPLSFYFFNGVSVAGLVINLVAIPFLSFI 419
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++P ++ + + ++ + GL I ++ F I I+
Sbjct: 420 LMPCLILLTAISSVFDISMVIIFIDSGLAFIFTC---LNKLPAGFGWLNIGIIGLSVIIY 476
Query: 186 EFL-LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
++ L++F + R + + + + I + L+AL++K+ Y
Sbjct: 477 AYITLLIFYFSPYRRLAFLPLTMLYIDYLLADKPTWKLHVFDVGHGLMALIEKDDKGFIY 536
Query: 245 SNPPSF 250
PS+
Sbjct: 537 DFGPSY 542
>gi|194472723|ref|ZP_03078707.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205358697|ref|ZP_03224107.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194459087|gb|EDX47926.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205332427|gb|EDZ19191.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 737
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 76/244 (31%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y + +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQW---FPAPNGN 333
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + ++ + + + FH I V ++AN+ A+P ++FV
Sbjct: 334 FPRGVRWLLNLLH---------LQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 385 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 441
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 442 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 501
Query: 239 TLIS 242
+I
Sbjct: 502 KVIL 505
>gi|326572572|gb|EGE22561.1| competence protein ComEC [Moraxella catarrhalis CO72]
Length = 841
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 78/226 (34%), Gaps = 23/226 (10%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + +A L P L+ F + + + + S MI + +
Sbjct: 398 PTGMISVLAWVALLMIWLDPYV--LWQAGFWLSFIAVLLLMRYESKINMINETNQNQGQL 455
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++ KQ+ + + S I F + ++GL+ N+ AI + FV++P
Sbjct: 456 VRRWLQFKQAV------RLQFWLFFSMLPVSILLFGKVSIWGLVVNLFAIGLFGFVIVPI 509
Query: 130 GLIAILLMILSLDNIPFGVMAWGL-DIIIHIAH---------RISVAHNEFCIGRIPETS 179
LIA + + ++ WG+ +++ H +I +
Sbjct: 510 NLIAGAV--FGILPELSQLL-WGVSSAVLYWLHDFLYFGLSSQIGSL-GAWLYAPFGMAG 565
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
F+ + L + R + I+ + +I L L+I
Sbjct: 566 FLLSFMVVGLWILPNVLPRVL-IILPLVAMIFLGLPKQIPHFKLII 610
>gi|296133956|ref|YP_003641203.1| DNA internalization-related competence protein ComEC/Rec2
[Thermincola sp. JR]
gi|296032534|gb|ADG83302.1| DNA internalization-related competence protein ComEC/Rec2
[Thermincola potens JR]
Length = 810
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/209 (11%), Positives = 71/209 (33%), Gaps = 28/209 (13%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
S+ + +P + + L F +F++ + ++Y +
Sbjct: 323 SVLGRKSSWPVSLSAACMLLLMWNPANLFTTGAQLSFAATWG-------------ILYLT 369
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
++++ S + S LI +F+ +P++ ++AN+L +P++
Sbjct: 370 SPIKNLIGFMPAALRGSLA------VIFAAQISTMPLLIYYFNYLPLFSVLANLLVVPLI 423
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGL----DIIIHIAHRISVAHNEFCIGRIPET 178
+ +++ A + ++ + L II I + + P
Sbjct: 424 TLIILLACTSLTVGLLFLPGAVLLNTGTSCLLQVVRWIIWI---VGRLPVAVYNIQSPRL 480
Query: 179 SFVTIVVEFLLMV--FCKTNIRHIGSIMI 205
+ I L+++ + ++ + I
Sbjct: 481 WELVIWYGILVLLGALYWERLLYLRVLWI 509
>gi|47569321|ref|ZP_00240005.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus G9241]
gi|47553992|gb|EAL12359.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus G9241]
Length = 773
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 27/213 (12%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 270 LYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 327
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 328 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYFSPYS 381
Query: 112 LIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+ NIL +P LS +V+P LI I ++ L V++ GL++
Sbjct: 382 IFLNILYVPFLSLIVLPCSIVILICIPIIPF-LAKRLADVLSIGLNLSNDFLIYCESLP- 439
Query: 169 EFCIGRIPETSFVTIVVEFL----LMVFCKTNI 197
F +TS + + + + +++ + +
Sbjct: 440 -FTRLNFGQTSILLVALYCVSIVSILMVWERRM 471
>gi|161503889|ref|YP_001571001.1| hypothetical protein SARI_01979 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865236|gb|ABX21859.1| hypothetical protein SARI_01979 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 729
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/246 (11%), Positives = 83/246 (33%), Gaps = 31/246 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y + +
Sbjct: 274 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQW---FPAPNGN 325
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ + + ++ + + + FH I V ++AN+ A+P ++FV
Sbjct: 326 FPWSIRWLLNLLH---------LQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 376
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 377 TVPLILAGMILHLTGPFFLEEGVWFLTDRALAALFYL---LNALPQGWVNIDQRWQWLTL 433
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSP-----DLLISEKGNLVALVD 236
+L ++ + N R ++ +++ + +P +L +G +A+V
Sbjct: 434 SP--WLTLIAWRLNIWRTWPAVCFSGLLLMSWPLWRPINPSGWQVHMLDVGQGLAIAIVR 491
Query: 237 KNTLIS 242
+ +I
Sbjct: 492 GDKVIL 497
>gi|225866306|ref|YP_002751684.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 03BB102]
gi|225789679|gb|ACO29896.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 03BB102]
Length = 663
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 90/283 (31%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 160 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 217
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 218 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 271
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 272 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 329
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 330 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 388
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 389 SGSVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 431
>gi|78189074|ref|YP_379412.1| ComEC/Rec2-related protein [Chlorobium chlorochromatii CaD3]
gi|78171273|gb|ABB28369.1| ComEC/Rec2-related protein [Chlorobium chlorochromatii CaD3]
Length = 755
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 73/247 (29%), Gaps = 26/247 (10%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
++ +K P + + I L P PG F + A+ Y +
Sbjct: 353 TVGQKTYPLNSLAVADLIILLINPLDLLNPG-----FLMTNGAVLALFLVYPLLHFPRPK 407
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ L+ I I S S + +F + +AN IP++
Sbjct: 408 NRTLLLSIVWF------LLDSII--ITLAASIGVSPVIAYYFGTFSLISFVAN---IPVV 456
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII----IHIAHRISVAHNEFCIGRIPET 178
F + + +L++ L V A G + + A S ++
Sbjct: 457 FFSTLLMYALVPMLVVYGLSQALASVFAAGAFWLARMTLQSALWFSNFSFASIPLKLDAV 516
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF------PYSFSPDLLISEKGNLV 232
+ ++ T + + + LF + P +P LL G +
Sbjct: 517 EVWLYYIVLAAVLLLATRKAWSRVAITFLLGVNLFVWYSLLFRPNPIAPTLLTVNLGRNL 576
Query: 233 ALVDKNT 239
A + N
Sbjct: 577 ATIVSNG 583
>gi|281426177|ref|ZP_06257090.1| ComEC/Rec2 family protein [Prevotella oris F0302]
gi|281399753|gb|EFB30584.1| ComEC/Rec2 family protein [Prevotella oris F0302]
Length = 521
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 48/166 (28%), Gaps = 17/166 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ I ++ P L+D F + ++ I Y +++
Sbjct: 320 LGRENISLNTLALATLIILIAQPMA-----LWDIGFQLSFMAVAGILIAYKPLFQLFNPI 374
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ W + L+ +F Y L+ N + +P +
Sbjct: 375 TRL-LRWAWG-----------MICVSVSAQLLTFPLLLHYFGRFSTYFLLTNFIVVPAAT 422
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ A L + ++L N F M + IS
Sbjct: 423 AILYLAFLTVLSTPFVALQNQIFNAMTTITGWMNTSVTAISRLPYA 468
>gi|172056810|ref|YP_001813270.1| DNA internalization-related competence protein ComEC/Rec2
[Exiguobacterium sibiricum 255-15]
gi|171989331|gb|ACB60253.1| DNA internalization-related competence protein ComEC/Rec2
[Exiguobacterium sibiricum 255-15]
Length = 719
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 63/220 (28%), Gaps = 24/220 (10%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
I ++ DP + I + ++ L+D F + + + I
Sbjct: 276 RINRRPDPLWVVSLIGALQL-----AISYTSLYDVGFQLTVGLTIFLLLSRKMWEKIKRP 330
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
W W IS Q + + + + ++ + NIL +
Sbjct: 331 -----WNWLLISLWAQIMTS--------------LVLQLAQQTEVSLWSPLLNILLGGWI 371
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+V++P + +++ + + + + +
Sbjct: 372 EWVILPLSFLVGTAVLIPSSDNLIRLHGQATSFLDQALAWAEKLPVPTVAVHLFSLPVLL 431
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
I +L + R G ++ + ++ + +P+
Sbjct: 432 IGTGTVLSGWWLAERRWFGHLVPLVGLLAASLYMDHQTPE 471
>gi|228987578|ref|ZP_04147695.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228772152|gb|EEM20601.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 693
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 27/213 (12%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 190 LYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 247
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 248 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYFSPYS 301
Query: 112 LIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+ NIL +P LS +V+P LI I ++ L V++ GL++
Sbjct: 302 IFLNILYVPFLSLIVLPCSIVILICIPIIPF-LAKRLADVLSIGLNLSNDFLIYCESLP- 359
Query: 169 EFCIGRIPETSFVTIVVEFL----LMVFCKTNI 197
F +TS + + + + +++ + +
Sbjct: 360 -FTRLNFGQTSILLVALYCVSIVSILMVWERRM 391
>gi|74317777|ref|YP_315517.1| DNA internalization-related competence protein ComEC/Rec2
[Thiobacillus denitrificans ATCC 25259]
gi|74057272|gb|AAZ97712.1| DNA internalization-related competence protein ComEC/Rec2
[Thiobacillus denitrificans ATCC 25259]
Length = 778
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 76/237 (32%), Gaps = 34/237 (14%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ PF A I L P G F + ++AI +
Sbjct: 330 RREPRPFSALLWALLIVLLIDPWAVVSAG-----FWLSFGAMAAILWV------------ 372
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + ++ ++ + + + L+ F + + AN +AIP++S+
Sbjct: 373 -SFGRVARPAKLRGWI------SVQAAVTLALAPALLLLFQQVSLVSPFANAVAIPVVSW 425
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVTI 183
+V P L+ +++ L + A ++ + S + P +
Sbjct: 426 LVTPLALLGVIVPPL------WDAAAAVMEWLGSGLAWASNLSWAVMVRPAPQPWTAALA 479
Query: 184 VVEFLLMVFCKT-NIRHIGSIMIGITIIILF--TFPYSFSPDLLISEKGNLVALVDK 237
+ ++ + R +G + P F D++ +G + +
Sbjct: 480 LAGTFWLLLPRGFPARALGGLFFLPLAFSPVETLAPGGFRADVIDVGQGTAILIRTA 536
>gi|322509087|gb|ADX04541.1| Competence factor involved in DNA uptake [Acinetobacter baumannii
1656-2]
gi|323519118|gb|ADX93499.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
baumannii TCDC-AB0715]
Length = 804
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 66/215 (30%), Gaps = 19/215 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P G F Y + Y +
Sbjct: 336 LLLKQPIKPFTLLVYSASLLLLIDPFSVLSAG-----FWLSYGACFILLRIYQTIAQLPE 390
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + K F+ ++ + S + F I + NI+A+PI
Sbjct: 391 QQFLSLSS-------KMIFMGKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 443
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 444 VGGVIVPLNIMAACAWFIVKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTP 501
Query: 178 TSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIII 211
S + I +++ K + + G + +I+
Sbjct: 502 LSLLAISFAIIILFLPKGILPKTWGILCCLPLVIM 536
>gi|255034863|ref|YP_003085484.1| ComEC/Rec2-like protein [Dyadobacter fermentans DSM 18053]
gi|254947619|gb|ACT92319.1| ComEC/Rec2-related protein [Dyadobacter fermentans DSM 18053]
Length = 593
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 66/215 (30%), Gaps = 25/215 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI-YSSES 64
+++ P + L P L+D F Y ++ I Y + I +
Sbjct: 328 RRHYPMNTLAFSALVILLCDPCA-----LYDVGFQLSYLAMAGIFLLYGPIERIVFPQNR 382
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ W+ + + + +FH P Y + N L + +
Sbjct: 383 ALRFVWQ-------------VTALSLAAQIATFPLSLYYFHQFPTYFWLVNPLVVVFTNV 429
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF---- 180
++ A L+ ++ L + ++ + + + +
Sbjct: 430 LLPAALLLLLVSAC-GLPWLA-WLVGKVAGLSAWLTDWAASIPRALPGHLLENLHLEIFE 487
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
V ++ + +V+ + R + + +++LF
Sbjct: 488 VILLYALIFLVWYTLHSRSLSYLKASFVVVMLFAA 522
>gi|184159174|ref|YP_001847513.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
baumannii ACICU]
gi|183210768|gb|ACC58166.1| predicted hydrolase (metallo-beta-lactamase superfamily)
[Acinetobacter baumannii ACICU]
Length = 811
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 66/215 (30%), Gaps = 19/215 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P G F Y + Y +
Sbjct: 342 LLLKQPIKPFTLLVYSASLLLLIDPFSVLSAG-----FWLSYGACFILLRIYQTIAQLPE 396
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + K F+ ++ + S + F I + NI+A+PI
Sbjct: 397 QQFLSLSS-------KMIFMGKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 449
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 450 VGGVIVPLNIMAACAWFIVKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTP 507
Query: 178 TSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIII 211
S + I +++ K + + G + +I+
Sbjct: 508 LSLLAISFAIIILFLPKGILPKTWGILCCLPLVIM 542
>gi|296137556|ref|YP_003644798.1| DNA internalization-related competence protein ComEC/Rec2
[Thiomonas intermedia K12]
gi|295797678|gb|ADG32468.1| DNA internalization-related competence protein ComEC/Rec2
[Thiomonas intermedia K12]
Length = 871
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 49/169 (28%), Gaps = 9/169 (5%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI--YSSESHNTWT 69
L P F + + + + + +
Sbjct: 402 DVMALALTAVLLWDPWAVR-----QAGFWLSFVAVG-MLFVAGNRRHPETAALACGPAEA 455
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + A+ + + + F I V +AN LAIP+++ VV P
Sbjct: 456 APAGRLQRGAQALRRAAHSQWVATIALLPLTLLFFQQIAVLSPLANALAIPVVTLVVAPL 515
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+ +LL LD + + AW + + +++ P+
Sbjct: 516 AVGGLLL-PAPLDGWAWRLGAWVQQGLDAVLRQMADWPLAQWHAAAPDG 563
>gi|288549443|ref|ZP_05967105.2| hypothetical protein ENTCAN_05483 [Enterobacter cancerogenus ATCC
35316]
gi|288319104|gb|EFC58042.1| DNA internalization-related competence protein ComEC/Rec2
[Enterobacter cancerogenus ATCC 35316]
Length = 754
Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/220 (10%), Positives = 67/220 (30%), Gaps = 27/220 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + + + P +F+ ++A+ +++ + S
Sbjct: 299 RQWSSWQVWLSCVAMILILDPLAVLSQ-----SFALSAFAVAALIFWFQWLPLPDWRWSR 353
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ L + FH + + L+AN+ A+P+++FV
Sbjct: 354 RLRPIVNLVHLQAGMLVLLLPLQVVI------------FHGVSLSSLVANLFAVPLVTFV 401
Query: 126 VIPAGLIAILLMIL---SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L+ + L +L SL+ I + L ++ + + + +
Sbjct: 402 SVPLILLGMALHLLPLTSLETIIWFAADKSLGVLFWL---LMRLPDGWLGVDQRWQYLTL 458
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
R + + + D
Sbjct: 459 FP----WFALIGWRFRAWRVVPAVCLATSVMMAFPLWRTD 494
>gi|197300920|ref|ZP_03166236.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197289753|gb|EDY29114.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 664
Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 83/246 (33%), Gaps = 31/246 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y + +
Sbjct: 209 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQW---FPAPNGN 260
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + ++ + + + FH I V ++AN+ A+P ++FV
Sbjct: 261 FPRGVRWLLNLLH---------LQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 311
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ + I
Sbjct: 312 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGW--VNIDNRWQCL 366
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF-----SPDLLISEKGNLVALVD 236
+ +L+++ + N R ++ + +++ + +L +G +A+V
Sbjct: 367 TFLPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVR 426
Query: 237 KNTLIS 242
+ +I
Sbjct: 427 GDKVIL 432
>gi|326559532|gb|EGE09946.1| competence protein ComEC [Moraxella catarrhalis 7169]
gi|326567785|gb|EGE17891.1| competence protein ComEC [Moraxella catarrhalis BC1]
Length = 841
Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 21/225 (9%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + +A L P L+ F + + + + S MI + +
Sbjct: 398 PADMISVLAWVALLMIWLDPYV--LWQAGFWLSFIAVLLLMRYESKINMINETNQNQGQL 455
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++ KQ+ + + S I F + ++GL+ N+ AI + FVV+P
Sbjct: 456 VRRWLQFKQAV------RLQFWLFFSMLPVSILLFGKVSIWGLVVNLFAIGLFGFVVVPI 509
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAH---------RISVAHNEFCIGRIPETSF 180
LIA + + ++ +++ H +I + F
Sbjct: 510 NLIAGAV--FGILPELSQLLWGTSSAVLYWLHDFLYFGLSSQIGSL-GAWLYAPFGMAGF 566
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + L + R + I+ + +I L L+I
Sbjct: 567 LLSFMVVGLWILPNVLPRVL-IILPLVAMIFLGLPKQIPHFKLII 610
>gi|332876001|ref|ZP_08443787.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6014059]
gi|332735867|gb|EGJ66908.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6014059]
Length = 810
Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 66/215 (30%), Gaps = 19/215 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P G F Y + Y +
Sbjct: 342 LLLKQPIKPFTLLVYSASLLLLIDPFSVLSAG-----FWLSYGACFILLRIYQTIAQLPE 396
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + K F+ ++ + S + F I + NI+A+PI
Sbjct: 397 QQFLSLSS-------KMIFMGKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 449
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 450 VGGVIVPLNIMAACAWFIVKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTP 507
Query: 178 TSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIII 211
S + I +++ K + + G + +I+
Sbjct: 508 LSLLAISFAIIILFLPKGILPKTWGILCCLPLVIM 542
>gi|229186565|ref|ZP_04313726.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BGSC 6E1]
gi|228596824|gb|EEK54483.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BGSC 6E1]
Length = 663
Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 91/283 (32%), Gaps = 37/283 (13%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 160 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 217
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 218 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 271
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 272 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLP-- 329
Query: 170 FCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP---- 221
F +T + + + + +++ + I G + I I + + + P
Sbjct: 330 FTRLNFGQTPILLVALYCVSIISVLMVWERRIS-KGMVFIFAGIFLFISTGHYVYPYFRE 388
Query: 222 ----DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+++ + D+ + + +W+
Sbjct: 389 SGSVTFLDVGQGDVILIRLPYDQEIYLIDTGGTIRLNKEEWQR 431
>gi|325285701|ref|YP_004261491.1| ComEC/Rec2-like protein [Cellulophaga lytica DSM 7489]
gi|324321155|gb|ADY28620.1| ComEC/Rec2-related protein [Cellulophaga lytica DSM 7489]
Length = 667
Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 48/166 (28%), Gaps = 17/166 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + F L P+ LF Y + +I F I K +
Sbjct: 319 MFLNRPTSSFNILALSLFFILLCKPNL-----LFSVGLQMSYAAVFSIVLFNPIFKKL-- 371
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
W+ + + + +FH P I N+ IP
Sbjct: 372 --------WEPKYYLTNKIWQ--LLTVSLAAQLGVLPISLYYFHQFPSLFFITNLAIIPF 421
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
L ++ ++ IL + +L N + + + + ++
Sbjct: 422 LGVILSVGIVVVILALFNALPNFLVTLYNGIIFSMNSVVKWVATQE 467
>gi|218259991|ref|ZP_03475476.1| hypothetical protein PRABACTJOHN_01137 [Parabacteroides johnsonii
DSM 18315]
gi|218224811|gb|EEC97461.1| hypothetical protein PRABACTJOHN_01137 [Parabacteroides johnsonii
DSM 18315]
Length = 426
Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 30/198 (15%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP-KMIYSS 62
+ ++ + + + P LFD F Y + +I YF +I
Sbjct: 221 LDRRAERYNILAASAFCMLVYEPLY-----LFDIGFQLSYLAVLSILYFQPRLQALIKVH 275
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
W + + A + + +F L+ N+ + L
Sbjct: 276 NPFLRTPWGWV-------------TVTLSAQAGTTFLCLYYFGQFSTVFLLTNL-PLTFL 321
Query: 123 SFVVIPAGLIAILLMILSLDNIP-FGVMAWGLDI----IIHIAHRISVAHNEFCIGRIPE 177
+ ++IPA L+ + L + IP +G + G++ ++ + S R
Sbjct: 322 ATLLIPASLVYMFLP----EWIPEYGWLQVGVEWLAHGLLWVVDAFSRVPGAVFSFRFDF 377
Query: 178 TSFVTIVVEFLLMVFCKT 195
+ + LL +
Sbjct: 378 PAM-LVAYGMLLSILLYG 394
>gi|224026561|ref|ZP_03644927.1| hypothetical protein BACCOPRO_03318 [Bacteroides coprophilus DSM
18228]
gi|224019797|gb|EEF77795.1| hypothetical protein BACCOPRO_03318 [Bacteroides coprophilus DSM
18228]
Length = 649
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 56/164 (34%), Gaps = 24/164 (14%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ ++ F + + + L P LFD +F + + I FY +
Sbjct: 321 FFLEGRFSGFLSLSLAAFLMLLYRPFY-----LFDVSFQLSFLAVWGILLFYPV------ 369
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ W I+ ++ F++ +F P Y L+AN+L P+
Sbjct: 370 ---FSGWLPAGCRRIR---WLWNTLSVSMAAQLGTLPFVLFYFGAFPTYFLLANLLVTPL 423
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISV 165
++ L L+ + IP + D++ A ++
Sbjct: 424 A------VCILGSSLAALAFERIP-WMGERAADLVRLSAEALNG 460
>gi|326562730|gb|EGE13032.1| competence protein ComEC [Moraxella catarrhalis 103P14B1]
gi|326574168|gb|EGE24116.1| competence protein ComEC [Moraxella catarrhalis 101P30B1]
Length = 841
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 21/225 (9%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + +A L P L+ F + + + + S MI + +
Sbjct: 398 PTGMISVLAWVALLMIWLDPYV--LWQAGFWLSFIAVLLLMRYESKINMINETNQNQGQL 455
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
++ KQ+ + + S I F + ++GL+ N+ AI + FVV+P
Sbjct: 456 VRRWLQFKQAV------RLQFWLFFSMLPVSILLFGKVSIWGLVVNLFAIGLFGFVVVPI 509
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAH---------RISVAHNEFCIGRIPETSF 180
LIA + + ++ +++ H +I + F
Sbjct: 510 NLIAGAV--FGILPELSQLLWGTSSAVLYWLHDFLYFGLSSQIGSL-GAWLYAPFGMAGF 566
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + L + R + I+ + +I L L+I
Sbjct: 567 LLSFMVVGLWILPNVLPRVL-IILPLVAMIFLGLPKQIPHFKLII 610
>gi|90021347|ref|YP_527174.1| DNA internalization-related competence protein ComEC/Rec2
[Saccharophagus degradans 2-40]
gi|89950947|gb|ABD80962.1| DNA internalization-related competence protein ComEC/Rec2
[Saccharophagus degradans 2-40]
Length = 839
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/226 (13%), Positives = 72/226 (31%), Gaps = 19/226 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K + + L P G F + ++ + + ++ +++
Sbjct: 340 KYFSGVRILIIAAIVVVLVDPFAFLSAG-----FWLSFGAVACLFFSFTAKPAAFATNVE 394
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
T + S I + + + + ++ I AN++A+P++S +
Sbjct: 395 TTKAFASASKILRGAKALMLMQWQLFVGLFVLLIVLGQ--QISWVSPFANVVAVPVVSIL 452
Query: 126 VIPAGLIAILLM------ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
V+P L+A +L L + ++A L + + + P
Sbjct: 453 VVPLVLLASVLFSIWEWGALGCLQVADTLLAIVLWWLNWVVDIQNTLPVFNLSLSTPAKW 512
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+L+ R + +G+ I + F S PD +
Sbjct: 513 LAFFATVLILL------PRALACRALGVAIAVCVFFDQSSKPDKFV 552
>gi|326564634|gb|EGE14852.1| competence protein ComEC [Moraxella catarrhalis 46P47B1]
Length = 842
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 20/225 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + +A L P L+ F + + + Y PK+ ++++
Sbjct: 398 PADMISVLAWVALLMIWLDPYV--LWQAGFWLSFIAVLLLMR-YESPKIDMINDTNQNQG 454
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ + + + S I F + ++GL+ N+ AI + FVV+P
Sbjct: 455 ----QLVRRWLQFKQVVRLQFWLFFSMLPVSILLFGKVSIWGLVVNLFAIGLFGFVVVPI 510
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAH---------RISVAHNEFCIGRIPETSF 180
LIA + + ++ +++ H +I + F
Sbjct: 511 NLIAGAV--FGILPELSQLLWGTSSAVLYWLHDFLYFGLSSQIGSL-GAWLYAPFGMAGF 567
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + L + R + I+ + +I L L+I
Sbjct: 568 LLSFMVVGLWILPNVLPRVL-IILPLVAMIFLGLPKQIPHFKLII 611
>gi|256419973|ref|YP_003120626.1| ComEC/Rec2-related protein [Chitinophaga pinensis DSM 2588]
gi|256034881|gb|ACU58425.1| ComEC/Rec2-related protein [Chitinophaga pinensis DSM 2588]
Length = 694
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 58/161 (36%), Gaps = 13/161 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L D F Y + +I Y + K ++ + +
Sbjct: 358 LLDVGFQLSYLAVLSIVVAYRRLY------YQLRFDNKYLNRLWD------MTALTLAAQ 405
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH P+Y L AN++A+P+ + V+ L+ I+ I ++ + ++ +
Sbjct: 406 LFTLPVSLYYFHQFPLYFLPANMMAVPLSTVVLYGELLLLIVGRIPAIAVMVGSLLKMIM 465
Query: 154 DIIIHIAHRISVAHNEFCI-GRIPETSFVTIVVEFLLMVFC 193
++ + ++I ++P S + + ++
Sbjct: 466 QLMNTLVNQIGHLPGALMADTQLPLFSVLCLYACIGGLLLW 506
>gi|326575607|gb|EGE25531.1| competence protein ComEC [Moraxella catarrhalis O35E]
Length = 842
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 20/225 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + +A L P L+ F + + + Y PK+ ++++
Sbjct: 398 PADMISVLAWVALLMIWLDPYV--LWQAGFWLSFIAVLLLMR-YESPKIDMINDTNQNQG 454
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ + + + S I F + ++GL+ N+ AI + FVV+P
Sbjct: 455 ----QLVRRWLQFKQAVRLQFWLFFSMLPVSILLFGKVSIWGLVVNLFAIGLFGFVVVPI 510
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAH---------RISVAHNEFCIGRIPETSF 180
LIA + + ++ +++ H +I + F
Sbjct: 511 NLIAGAV--FGILPELSQLLWGTSSAVLYWLHDFLYFGLSSQIGSL-GAWLYAPFGMAGF 567
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + L + R + I+ + +I L L+I
Sbjct: 568 LLSFMVVGLWILPNVLPRVL-IILPLVAMIFLGLPKQIPHFKLII 611
>gi|288799889|ref|ZP_06405348.1| ComEC/Rec2 family protein [Prevotella sp. oral taxon 299 str.
F0039]
gi|288333137|gb|EFC71616.1| ComEC/Rec2 family protein [Prevotella sp. oral taxon 299 str.
F0039]
Length = 504
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 10/139 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F + + I FY + S ++ +
Sbjct: 336 LWDVSFQMSFLSVLGIFLFYPLFTFCLRPASSFLGSF--------FNAIIKMMAVSLSAQ 387
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
+ ++ +F P Y L ANI+A+P VV+ L+A+L +L I +A G
Sbjct: 388 IGVAPLVLYYFGGFPTYFLFANIIAVPAF-IVVVYIVLVALLGSVLYGKIIVLMTIACGL 446
Query: 153 LDIIIHIAHRISVAHNEFC 171
+D + + IS F
Sbjct: 447 IDKLNAVLRWISELPYAFI 465
>gi|326565451|gb|EGE15622.1| competence protein ComEC [Moraxella catarrhalis 12P80B1]
Length = 842
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 20/225 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + +A L P L+ F + + + Y PK+ ++++
Sbjct: 398 PADMISVLAWVALLMIWLDPYV--LWQAGFWLSFIAVLLLMR-YESPKIDMINDTNQNQG 454
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ + + + S I F + ++GL+ N+ AI + FVV+P
Sbjct: 455 ----QLVRRWLQFKQAVRLQFWLFFSMLPVSILLFGKVSIWGLVVNLFAIGLFGFVVVPI 510
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAH---------RISVAHNEFCIGRIPETSF 180
LIA + + ++ +++ H +I + F
Sbjct: 511 NLIAGAV--FGILPELSQLLWGTSSAVLYWLHDFLYFGLSSQIGSL-GAWLYAPFGMAGF 567
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + L + R + I+ + +I L L+I
Sbjct: 568 LLSFMVVGLWILPNVLPRVL-IILPLVAMIFLGLPKQIPHFKLII 611
>gi|294505830|ref|YP_003569888.1| DNA internalization-related competence protein ComEC/Rec2
[Salinibacter ruber M8]
gi|294342158|emb|CBH22936.1| DNA internalization-related competence protein ComEC/Rec2
[Salinibacter ruber M8]
Length = 829
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 57/224 (25%), Gaps = 22/224 (9%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ + L P LFD F +S I + + +
Sbjct: 368 GVAALVLL----AVRPPMLFDVGFQLSMAAVSGIVTLNPRFLEMVPDRYRTSEALDWV-- 421
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ L+ HF + V GL+ N++ IP + A +
Sbjct: 422 -------LSTGTTSAAAILGTAPVLLYHFGWVSVAGLLLNMVGIPCTGLALTSAIATVAV 474
Query: 136 LMILSLDNIPF-GVMAWGLDIIIHIAHRISVAH--NEFCIGRIPETSFVTIVVEFLLMVF 192
+ + F L ++ + + + + + +
Sbjct: 475 GGLWPMAAASFGSAADVFLQGLLATSRYGAAWFSWAGIRMATPDLWELTALGAGLIAVAQ 534
Query: 193 C---KTNIRHI---GSIMIGITIIILFTFPYSFSPDLLISEKGN 230
+ R I G M + + + D++ + G
Sbjct: 535 WPRPRLRWRWIVIGGLFMTASVWGPVVGGGTAPTLDIVFFDVGQ 578
>gi|320664293|gb|EFX31444.1| ComEC family competence protein [Escherichia coli O157:H7 str.
LSU-61]
Length = 754
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSDWDVWICCLAAILLMDPVVILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L LD + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILDQGLWFLADRSLALLFL---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|289434762|ref|YP_003464634.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171006|emb|CBH27548.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 723
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 55/139 (39%), Gaps = 11/139 (7%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR-------ANIGT 90
S + I S I +F P +IY ++ + + I
Sbjct: 272 WSSFSIICISFILFFIIQPYVIYEVGFQLSYAVSFGIILSSRGILAKLQHPLSKSLAISF 331
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGV 148
+ +S+ ++ HF+ G+ N+L +PI + ++P + +LL S L IP +
Sbjct: 332 VSTMMSSVVMMYHFYSFSWVGIFFNLLYVPIFTIFILPGCFLVLLLSFTSSALLIIPEKL 391
Query: 149 MAWGLDIIIHIAHRISVAH 167
+ + + II ++ + +
Sbjct: 392 LTFFIQIIENLTNLFAKIP 410
>gi|186682068|ref|YP_001865264.1| ComEC/Rec2-related protein [Nostoc punctiforme PCC 73102]
gi|186464520|gb|ACC80321.1| ComEC/Rec2-related protein [Nostoc punctiforme PCC 73102]
Length = 784
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/201 (11%), Positives = 66/201 (32%), Gaps = 19/201 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + ++ + + + I + +
Sbjct: 372 IWDLGFQLSFLATLGLIV-------------TVPALVNRLVWLPPAIASLI--AVPLAAT 416
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ F +P Y L+ N+++ P++S + I + A++ +I + V+ +
Sbjct: 417 LWTLPVQLSVFGVVPSYSLLLNVVSTPLISIISIGGIISALVGLIWTQAGSFLAAVLHYP 476
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVE--FLLMVFCKTNIRHIGSIMIGITI 209
D +I + S +G I + I + +V + ++++ +
Sbjct: 477 TDWLIKLVEFFSKLPGNSVAVGSISIWQLLAIYALIILVWLVPWWQRRWWVANVIVIGLV 536
Query: 210 IILFTFPYSFSPDLLISEKGN 230
I + + + E G
Sbjct: 537 FIPLWHSTNTLFRITVLESGT 557
>gi|207722856|ref|YP_002253290.1| dna translocation competence protein coma [Ralstonia solanacearum
MolK2]
gi|206588040|emb|CAQ18620.1| dna translocation competence protein coma [Ralstonia solanacearum
MolK2]
Length = 834
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/238 (11%), Positives = 64/238 (26%), Gaps = 16/238 (6%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + L P G F + ++ I +
Sbjct: 341 DRSVPASLSLCWAAAVVALVDPWAVMSAG-----FWLSFGAVAVIFLATRMAAADAGGND 395
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + A I + + F + V AN LAIP++S
Sbjct: 396 RQSTWPR-----RAWRALCGGARIQLAVTFGLLPLTLLLFQQVSVVSAAANALAIPVVSL 450
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V P LI L ++ ++ + + +
Sbjct: 451 VTTPLALIGAAL-PERWAQPVLAWAEASFGWLVSWLDGLAAPAWSVWMAPVAPAWAWLLA 509
Query: 185 VEFLLMVFCKTN-----IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
+ + ++ R G++++ ++ P + L+ + G A + +
Sbjct: 510 IGGVPLLLAPGGHRAWAWRAQGALLLLPMLLARAPAPPPGAFRLVAFDIGQGAAALVE 567
>gi|330878267|gb|EGH12416.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 738
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 25/176 (14%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S +W S ++
Sbjct: 314 VLIVEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGSWSWWQSWTRAQ 358
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P LI LL+
Sbjct: 359 WLIAIGLLPILLALNLP---------ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPFP 409
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + L+ + ++ A + +P +++ ++ +++ K
Sbjct: 410 VVGEGLLWLAGGALEWLFVFLGWVAEALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 465
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 79/253 (31%), Gaps = 16/253 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ +L P G P FD+ + I A G ++ + + ++
Sbjct: 123 SGERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQR 182
Query: 73 ISSI--KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ ++ + +G S+ + + ++L I ++
Sbjct: 183 LLAVDAQGREGGLAALVLGDGSGLSSGDW------QVLQDTGTVHLLVISGQHIGLLAGV 236
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ A++ L A I+ G ++V +L
Sbjct: 237 IYALVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVL- 292
Query: 191 VFCKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+ RH+G + +I +++ + P +S + ++ + + ++S
Sbjct: 293 -LWRLRFRHLGVVWPFLISFNAVLIVEPLVTLQPGFWLSFAAVGILVLIFSGRLGSWSWW 351
Query: 248 PSFIFSQWKSALI 260
S+ +QW A+
Sbjct: 352 QSWTRAQWLIAIG 364
>gi|302385260|ref|YP_003821082.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium saccharolyticum WM1]
gi|302195888|gb|ADL03459.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium saccharolyticum WM1]
Length = 818
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 52/167 (31%), Gaps = 30/167 (17%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
F + + AIG+ + I + +
Sbjct: 328 QGGFQLSFGAVFAIGWVSPVIA----------------DWIGKEKPLAAAVSASFAIQVV 371
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD- 154
L+ HF+ IP+Y + N+L IP++ V+ +IL + GV A G
Sbjct: 372 TMPVLLYHFYQIPLYSIFLNLLVIPLMGGVL----CSGFGTIILGSLSPVMGVFAAGTGH 427
Query: 155 IIIHIAHR----ISVAHNE-FCIGRIPETSF----VTIVVEFLLMVF 192
I+ + ++ + GR + ++V + +
Sbjct: 428 YILALYEFLCRKVAALPGDSLTTGRPGAARMTAYGLLLMVGLVSLTL 474
>gi|292670835|ref|ZP_06604261.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647456|gb|EFF65428.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 811
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/162 (11%), Positives = 53/162 (32%), Gaps = 17/162 (10%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
F +F + + + + + + + + +I
Sbjct: 361 FHISFQLSFLATAGLLFLAP-------------LLNRWMKRLPHVLAGSL--SITIAAQL 405
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGL 153
+A L HF+ + L +N+ +P++ ++I + I+ L NI F + L
Sbjct: 406 AALPILAWHFNQVSFSSLFSNLFVVPLVELIIILGLAGGLAAFIVPILGNIVFSFDSILL 465
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCK 194
+ + ++ ++ + + + + + + K
Sbjct: 466 GAVFEMTRALAALPFSKIWLPSMGILPGICYYILLVFICMPK 507
>gi|322616413|gb|EFY13322.1| hypothetical protein SEEM315_12428 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619663|gb|EFY16538.1| hypothetical protein SEEM971_17422 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622641|gb|EFY19486.1| hypothetical protein SEEM973_13535 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629790|gb|EFY26565.1| hypothetical protein SEEM974_05236 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632488|gb|EFY29234.1| hypothetical protein SEEM201_14795 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637017|gb|EFY33720.1| hypothetical protein SEEM202_02140 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641443|gb|EFY38081.1| hypothetical protein SEEM954_01443 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646091|gb|EFY42607.1| hypothetical protein SEEM054_01090 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322658623|gb|EFY54885.1| hypothetical protein SEEM19N_16652 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663480|gb|EFY59682.1| hypothetical protein SEEM801_11942 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670216|gb|EFY66356.1| hypothetical protein SEEM507_18719 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671452|gb|EFY67574.1| hypothetical protein SEEM877_09728 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676808|gb|EFY72875.1| hypothetical protein SEEM867_07876 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682733|gb|EFY78752.1| hypothetical protein SEEM180_06927 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686412|gb|EFY82394.1| hypothetical protein SEEM600_05905 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195935|gb|EFZ81102.1| hypothetical protein SEEM581_13191 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199777|gb|EFZ84866.1| hypothetical protein SEEM501_09303 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202770|gb|EFZ87806.1| hypothetical protein SEEM460_08239 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209041|gb|EFZ93978.1| hypothetical protein SEEM020_20005 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211517|gb|EFZ96356.1| hypothetical protein SEEM6152_19293 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217998|gb|EGA02713.1| hypothetical protein SEEM0077_06184 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323226703|gb|EGA10899.1| hypothetical protein SEEM0055_22791 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229800|gb|EGA13923.1| hypothetical protein SEEM0052_13217 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233025|gb|EGA17121.1| hypothetical protein SEEM3312_03169 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240760|gb|EGA24802.1| hypothetical protein SEEM5258_12779 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243076|gb|EGA27097.1| hypothetical protein SEEM1156_20629 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249761|gb|EGA33663.1| ComEC family competence protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252766|gb|EGA36604.1| ComEC family competence protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323254796|gb|EGA38597.1| ComEC family competence protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260003|gb|EGA43631.1| hypothetical protein SEEM8284_18128 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267996|gb|EGA51475.1| ComEC family competence protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269843|gb|EGA53292.1| ComEC family competence protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 754
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 83/246 (33%), Gaps = 31/246 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y + +
Sbjct: 299 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQW---FPAPNGN 350
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + ++ + + + FH I V ++AN+ A+P ++FV
Sbjct: 351 FPRGVRWLLNLLH---------LQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ + I
Sbjct: 402 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGW--VNIDNRWQCL 456
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF-----SPDLLISEKGNLVALVD 236
+ +L+++ + N R ++ + +++ + +L +G +A+V
Sbjct: 457 TFLPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVR 516
Query: 237 KNTLIS 242
+ +I
Sbjct: 517 GDKVIL 522
>gi|296113529|ref|YP_003627467.1| competence protein ComEC [Moraxella catarrhalis RH4]
gi|295921223|gb|ADG61574.1| competence protein ComEC [Moraxella catarrhalis RH4]
Length = 842
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 20/225 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + +A L P L+ F + + + Y PK+ ++++
Sbjct: 398 PADMISVLAWVALLMIWLDPYV--LWQAGFWLSFIAVLLLMR-YESPKIDMINDTNQNQG 454
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ + + + S I F + ++GL+ N+ AI + FVV+P
Sbjct: 455 ----QLVRRWLQFKQVVRLQFWLFFSMLPVSILLFGKVSIWGLVVNLFAIGLFGFVVVPI 510
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAH---------RISVAHNEFCIGRIPETSF 180
LIA + + ++ +++ H +I + F
Sbjct: 511 NLIAGAV--FGILPELSQLLWGTSSAVLYWLHDFLYFGLSSQIGSL-GAWLYAPFGMAGF 567
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + L + R + I+ + +I L L+I
Sbjct: 568 LLSFMVVGLWILPNVLPRVL-IILPLVAMIFLGLPKQIPHFKLII 611
>gi|327393336|dbj|BAK10758.1| DNA Internalization-related competence YcaI [Pantoea ananatis
AJ13355]
Length = 751
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 19/185 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + +Y + W ++ ++
Sbjct: 328 SFWLSVLAVGMLLTWYHWFPLAARFRHARRWLPIQLLHLQSGM------------MILML 375
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F+ I + LIAN+LAIP++SFV +P L+A+LL + +L + L ++
Sbjct: 376 PLQAGLFNGISITALIANLLAIPVVSFVTVPLILVAMLLPVPALSTWFWLAADGSLRFLL 435
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+++ + F+ +V LL +T I + F
Sbjct: 436 T---SLALLPPGWW-PLQGAAFFMLMVWGGLL--VWRT-GALFSLPWSCSAIALAMVFSR 488
Query: 218 SFSPD 222
+ P+
Sbjct: 489 HYKPE 493
>gi|322649607|gb|EFY46038.1| hypothetical protein SEEM675_15964 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654091|gb|EFY50414.1| hypothetical protein SEEM965_12787 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
Length = 724
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 83/246 (33%), Gaps = 31/246 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y + +
Sbjct: 269 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQW---FPAPNGN 320
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + ++ + + + FH I V ++AN+ A+P ++FV
Sbjct: 321 FPRGVRWLLNLLH---------LQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 371
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ + I
Sbjct: 372 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGW--VNIDNRWQCL 426
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF-----SPDLLISEKGNLVALVD 236
+ +L+++ + N R ++ + +++ + +L +G +A+V
Sbjct: 427 TFLPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVR 486
Query: 237 KNTLIS 242
+ +I
Sbjct: 487 GDKVIL 492
>gi|83748269|ref|ZP_00945295.1| DNA translocation competence protein ComA [Ralstonia solanacearum
UW551]
gi|83725110|gb|EAP72262.1| DNA translocation competence protein ComA [Ralstonia solanacearum
UW551]
Length = 846
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/238 (11%), Positives = 63/238 (26%), Gaps = 16/238 (6%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + L P G F + ++ I +
Sbjct: 353 DRSVPASLSLCWAAAVVALVDPWAVMSAG-----FWLSFGAVAVIFLATRMAAADAGGND 407
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + A I + + F + V AN LAIP++S
Sbjct: 408 RQSTWPR-----RAWRALCGGARIQLAVTFGLLPLTLLLFQQVSVVSAAANALAIPVVSL 462
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V P LI L ++ ++ + +
Sbjct: 463 VTTPLALIGAAL-PERWAQPVLAWAEASFGWLVSWLDGLAAPAWSVWTAPVAPAWAWLLA 521
Query: 185 VEFLLMVFCKTN-----IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
+ + ++ R G++++ ++ P + L+ + G A + +
Sbjct: 522 IGGVPLLLAPGGHRAWAWRAQGALLLLPMLLARAPAPPPGAFRLVAFDIGQGAAALVE 579
>gi|326568578|gb|EGE18649.1| competence protein ComEC [Moraxella catarrhalis BC7]
Length = 842
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 20/225 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + +A L P L+ F + + + Y PK+ ++++
Sbjct: 398 PADMISVLAWVALLMIWLDPYV--LWQAGFWLSFIAVLLLMR-YESPKIDMINDTNQNQG 454
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ + + + S I F + ++GL+ N+ AI + FVV+P
Sbjct: 455 ----QLVRRWLQFKQVVRLQFWLFFSMLPVSILLFGKVSIWGLVVNLFAIGLFGFVVVPI 510
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAH---------RISVAHNEFCIGRIPETSF 180
LIA + + ++ +++ H +I + F
Sbjct: 511 NLIAGAV--FGILPELSQLLWGTSSAVLYWLHDFLYFGLSSQIGSL-GAWLYAPFGMAGF 567
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + L + R + I+ + +I L L+I
Sbjct: 568 LLSFMVVGLWILPNVLPRVL-IILPLVAMIFLGLPKQIPHFKLII 611
>gi|307249980|ref|ZP_07531952.1| hypothetical protein appser4_7760 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858040|gb|EFM90124.1| hypothetical protein appser4_7760 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 729
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 17/235 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ Y P+ + + L P +F + ++ +Y S
Sbjct: 259 FLRYHYTPWQYWWRVVTVLLLFDPITVLS-----DSFWLSILAVMSLLIWYQY---FPLS 310
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++K I + L I G + F I + L AN++ +P+
Sbjct: 311 AFLRKFAYRKWGKIVRFCLGLIHLQCGIL--LIFTPVQFFFFEGISLTALPANLVIVPLY 368
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAH---RISVAHNEFCIGRIPET 178
SFV++P LI +L + + ++ + LD + I+ +S + I +
Sbjct: 369 SFVLVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWL--IIDL 426
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ + I+ L + ++ + LF + + G +A
Sbjct: 427 AILFILYGILHARTALYWYKRYALLLCCQCVFYLF-QLDKVPLQWITFDVGQGLA 480
>gi|307256790|ref|ZP_07538569.1| hypothetical protein appser10_7930 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864838|gb|EFM96742.1| hypothetical protein appser10_7930 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 729
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 17/235 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ Y P+ + + L P +F + ++ +Y S
Sbjct: 259 FLRYHYTPWQYWWRVVTVLLLFDPITVLS-----DSFWLSILAVMSLLIWYQY---FPLS 310
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++K I + L I G + F I + L AN++ +P+
Sbjct: 311 AFLRKFAYRKWGKIVRFCLGLIHLQCGIL--LIFTPVQFFFFEGISLTALPANLVIVPLY 368
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAH---RISVAHNEFCIGRIPET 178
SFV++P LI +L + + ++ + LD + I+ +S + I +
Sbjct: 369 SFVLVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWL--IIDL 426
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ + I+ L + ++ + LF + + G +A
Sbjct: 427 AILFILYGILHARTALYWYKRYALLLCCQCVFYLF-QLDKVPLQWITFDVGQGLA 480
>gi|194735838|ref|YP_002114034.1| hypothetical protein SeSA_A1097 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194711340|gb|ACF90561.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
Length = 756
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 83/246 (33%), Gaps = 31/246 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y + +
Sbjct: 301 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQW---FPAPNGN 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + ++ + + + FH I V ++AN+ A+P ++FV
Sbjct: 353 FPRGVRWLLNLLH---------LQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 403
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ + I
Sbjct: 404 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGW--VNIDNRWQCL 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF-----SPDLLISEKGNLVALVD 236
+ +L+++ + N R ++ + +++ + +L +G +A+V
Sbjct: 459 TFLPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVR 518
Query: 237 KNTLIS 242
+ +I
Sbjct: 519 GDKVIL 524
>gi|320653679|gb|EFX21753.1| ComEC family competence protein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
Length = 754
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVVILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L LD + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILDQGLWFLADRSLALLFL---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|302872358|ref|YP_003840994.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor obsidiansis OB47]
gi|302575217|gb|ADL43008.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor obsidiansis OB47]
Length = 752
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I FY ++ I+ +K +
Sbjct: 330 LFDVGFQLSFLSVLSIILFYKG-------------IYEYIAKLKIPSGVSSLIAVSISAQ 376
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
L +F + V NI+A+P+ S VV +GL+ + +I ++D +PF +
Sbjct: 377 ILILPLLAYYFSEVSVISFFTNIVAVPVASAVVP-SGLMYFIFLIFNIDILPFKWFLEVC 435
Query: 153 LDIIIHIAH 161
+++++ ++
Sbjct: 436 VNVLMFLSR 444
>gi|218905462|ref|YP_002453296.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH820]
gi|218534783|gb|ACK87181.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH820]
Length = 654
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 85/280 (30%), Gaps = 31/280 (11%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 151 IYMILAGASPSVIRASITGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 208
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 209 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 262
Query: 112 LIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-N 168
+ NIL +P LS +V+P ++ L +I L V++ GL++
Sbjct: 263 IFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSFANVLSIGLNLSNDFLSYCESLPFT 322
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP------- 221
G+ P V + ++ G + I I + + + P
Sbjct: 323 RLNFGQTPILLVALYCVSIISVLMVWERRISKGMVFIFAGIFLFISTGHYVYPYFRESGS 382
Query: 222 -DLLISEKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
L +G+ + + D+ + + +W+
Sbjct: 383 VTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 422
>gi|326568703|gb|EGE18773.1| competence protein ComEC [Moraxella catarrhalis BC8]
Length = 842
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 20/225 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + +A L P L+ F + + + Y PK+ ++++
Sbjct: 398 PADMISVLAWVALLMIWLDPYV--LWQAGFWLSFIAVLLLMR-YESPKIDMINDTNQNQG 454
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ + + + S I F + ++GL+ N+ AI + FVV+P
Sbjct: 455 ----QLVRRWLQFKQAVRLQFWLFFSMLPVSILLFGKVSIWGLVVNLFAIGLFGFVVVPI 510
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAH---------RISVAHNEFCIGRIPETSF 180
LIA + + ++ +++ H +I + F
Sbjct: 511 NLIAGAV--FGILPELSQLLWGTSSAVLYWLHDFLYFGLSSQIGSL-GAWLYAPFGMVGF 567
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + L + R + I+ + +I L L+I
Sbjct: 568 LLSFMVVGLWILPNVLPRVL-IILPLVAMIFLGLPKQIPHFKLII 611
>gi|291281914|ref|YP_003498732.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O55:H7 str. CB9615]
gi|290761787|gb|ADD55748.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O55:H7 str. CB9615]
gi|320659824|gb|EFX27380.1| ComEC family competence protein [Escherichia coli O55:H7 str. USDA
5905]
Length = 754
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVVILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L LD + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILDQGLWFLADRSLALLFL---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|15806854|ref|NP_295577.1| competence protein ComEC/Rec2 [Deinococcus radiodurans R1]
gi|6459631|gb|AAF11405.1|AE002025_4 competence protein ComEC/Rec2, putative [Deinococcus radiodurans
R1]
Length = 755
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 59/187 (31%), Gaps = 20/187 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + + + + + ++ +
Sbjct: 344 DVGFQLSFLAVLGLLLSGKLADRLPQRWPQ---------------WLKLALAATVLAELA 388
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ +F +P+ GL AN+LA PI++ +V P G +A LL + +A
Sbjct: 389 TLPVIAHNFGQLPLVGLPANLLAAPIMAVLV-PLGFLAGLLGPAG--GLVNWAVAPLASA 445
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-KTNIRHIGSIMIGITIIILFT 214
++ +A A G + F+ + + + +R ++ I + L
Sbjct: 446 LLWVAQTFGSAP-VLGWGTLGAGGFLAYALAAVAGMGWLLGRVRGQAALTIALACAALSW 504
Query: 215 FPYSFSP 221
P P
Sbjct: 505 LPAQLRP 511
>gi|307245626|ref|ZP_07527712.1| hypothetical protein appser1_8290 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306853328|gb|EFM85547.1| hypothetical protein appser1_8290 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 729
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 17/235 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ Y P+ + + L P +F + ++ +Y S
Sbjct: 259 FLRYHYTPWQYWWRVVTVLLLFDPITVLS-----DSFWLSILAVMSLLIWYQY---FPLS 310
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++K I + L I G + F I + L AN++ +P+
Sbjct: 311 AFLRKFAYRKWGKIVRFCLGLIHLQCGIL--LIFTPVQFFFFEGISLTALPANLVIVPLY 368
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAH---RISVAHNEFCIGRIPET 178
SFV++P LI +L + + ++ + LD + I+ +S + I +
Sbjct: 369 SFVLVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWL--IIDL 426
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ + I+ L + ++ + LF + + G +A
Sbjct: 427 AILFILYGILHARTALYWYKRYALLLCCQCVFYLF-QLDKVPLQWITFDVGQGLA 480
>gi|307259038|ref|ZP_07540768.1| hypothetical protein appser11_8360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307263430|ref|ZP_07545046.1| hypothetical protein appser13_8470 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306866705|gb|EFM98563.1| hypothetical protein appser11_8360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306871308|gb|EFN03036.1| hypothetical protein appser13_8470 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 729
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 76/239 (31%), Gaps = 25/239 (10%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ Y P+ + + L P +F + ++ +Y S
Sbjct: 259 FLRYHYTPWQYWWRVVTVLLLFDPITVLS-----DSFWLSILAVMSLLIWYQY---FPLS 310
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++K I + L I G + F I + L AN++ +P+
Sbjct: 311 AFLRKFAYRKWGKIVRFCLGLIHLQCGIL--LIFTPVQFFFFEGISLTALPANLVIVPLY 368
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAH---RISVAHNEFCIGRIPET 178
SFV++P LI +L + + ++ + LD + I+ +S
Sbjct: 369 SFVLVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQ-------W 421
Query: 179 SFVTIVVEFLLMVFCKTNIRHI---GSIMIGITIIILFTFPYSFSP-DLLISEKGNLVA 233
+ + + F+L ++ + + F P + + G +A
Sbjct: 422 LIIDLAILFILYGILHARTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFDVGQGLA 480
>gi|53728983|ref|ZP_00134353.2| COG0658: Predicted membrane metal-binding protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 719
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 76/239 (31%), Gaps = 25/239 (10%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ Y P+ + + L P +F + ++ +Y S
Sbjct: 249 FLRYHYTPWQYWWRVVTVLLLFDPITVLS-----DSFWLSILAVMSLLIWYQY---FPLS 300
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++K I + L I G + F I + L AN++ +P+
Sbjct: 301 AFLRKFAYRKWGKIVRFCLGLIHLQCGIL--LIFTPVQFFFFEGISLTALPANLVIVPLY 358
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAH---RISVAHNEFCIGRIPET 178
SFV++P LI +L + + ++ + LD + I+ +S
Sbjct: 359 SFVLVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQ-------W 411
Query: 179 SFVTIVVEFLLMVFCKTNIRHI---GSIMIGITIIILFTFPYSFSP-DLLISEKGNLVA 233
+ + + F+L ++ + + F P + + G +A
Sbjct: 412 LIIDLAILFILYGILHARTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFDVGQGLA 470
>gi|38703904|ref|NP_309023.2| hypothetical protein ECs0996 [Escherichia coli O157:H7 str. Sakai]
gi|161367627|ref|NP_286788.2| hypothetical protein Z1259 [Escherichia coli O157:H7 EDL933]
gi|168751176|ref|ZP_02776198.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4113]
gi|168757005|ref|ZP_02782012.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4401]
gi|168762951|ref|ZP_02787958.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4501]
gi|168769908|ref|ZP_02794915.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4486]
gi|168776235|ref|ZP_02801242.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4196]
gi|168784110|ref|ZP_02809117.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4076]
gi|168787342|ref|ZP_02812349.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC869]
gi|168801403|ref|ZP_02826410.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC508]
gi|195940070|ref|ZP_03085452.1| hypothetical protein EscherichcoliO157_27375 [Escherichia coli
O157:H7 str. EC4024]
gi|208815674|ref|ZP_03256853.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4045]
gi|208822704|ref|ZP_03263023.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4042]
gi|209400423|ref|YP_002269585.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4115]
gi|217326549|ref|ZP_03442633.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. TW14588]
gi|254792112|ref|YP_003076949.1| hypothetical protein ECSP_1017 [Escherichia coli O157:H7 str.
TW14359]
gi|261227416|ref|ZP_05941697.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256161|ref|ZP_05948694.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK966]
gi|187768344|gb|EDU32188.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4196]
gi|188014723|gb|EDU52845.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4113]
gi|188998647|gb|EDU67633.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4076]
gi|189355930|gb|EDU74349.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4401]
gi|189361154|gb|EDU79573.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4486]
gi|189366795|gb|EDU85211.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4501]
gi|189372664|gb|EDU91080.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC869]
gi|189376452|gb|EDU94868.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC508]
gi|208732322|gb|EDZ81010.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4045]
gi|208738189|gb|EDZ85872.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4042]
gi|209161823|gb|ACI39256.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4115]
gi|217322770|gb|EEC31194.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. TW14588]
gi|254591512|gb|ACT70873.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|320192601|gb|EFW67242.1| hypothetical protein ECoD_00528 [Escherichia coli O157:H7 str.
EC1212]
gi|320637781|gb|EFX07573.1| ComEC family competence protein [Escherichia coli O157:H7 str.
G5101]
gi|326338192|gb|EGD62021.1| hypothetical protein ECF_05143 [Escherichia coli O157:H7 str. 1125]
gi|326346169|gb|EGD69907.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. 1044]
Length = 754
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVVILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L LD + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILDQGLWFLADRSLALLFL---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 497
>gi|332666397|ref|YP_004449185.1| ComEC/Rec2-like protein [Haliscomenobacter hydrossis DSM 1100]
gi|332335211|gb|AEE52312.1| ComEC/Rec2-related protein [Haliscomenobacter hydrossis DSM 1100]
Length = 690
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 68/192 (35%), Gaps = 15/192 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + I+ I F IY+ S + + ++G
Sbjct: 354 LWDIGFQLSFLAIAGIVAFQPW---IYALWSAPNVVLDYVWKL---------TSVGIAAQ 401
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
S I +FH PV+ ++ ++A+P+ +++ L+ +L + ++A+ +
Sbjct: 402 LSTGPLSIFYFHQFPVFFWLSGLVAVPLSGVILVLGLLLFVLEAMHIPAMWIGKLLAFSI 461
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE---FLLMVFCKTNIRHIGSIMIGITII 210
++ + I G E ++ L + + + + + + + +
Sbjct: 462 QLLNRLIEAIHQLPYAVASGFWWEAWATLVMYGVLSLLCIALYRRKLGWLNAALALLLVW 521
Query: 211 ILFTFPYSFSPD 222
+ +P F
Sbjct: 522 TMAHWPGIFQAQ 533
>gi|294055979|ref|YP_003549637.1| ComEC/Rec2-related protein [Coraliomargarita akajimensis DSM 45221]
gi|293615312|gb|ADE55467.1| ComEC/Rec2-related protein [Coraliomargarita akajimensis DSM 45221]
Length = 529
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 64/228 (28%), Gaps = 18/228 (7%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF-------YSIPK 57
+++ +PF A + P+ L+ F Y + +I F
Sbjct: 306 SRQRNPFSALINSALFVLIIDPTQ-----LWSLGFQLSYSVVLSILLFGIPFYNSLQQAT 360
Query: 58 MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
+ W W+ S + I +I +++ HF I ++ N+
Sbjct: 361 EPFRWLPSEDWNWRHQLSKRVHTTLCISFSISLAAWLASAPLCAGHFGYISPASILLNVA 420
Query: 118 AIPILSFVVIPA--GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GR 174
I + S V+ L L I L + G+ I+ + +
Sbjct: 421 LIGLASLVICSGVLSLATSLCGIEGLASFINHAAWLGIAIMDYTVSAFTALPTLVFHCPN 480
Query: 175 IPETSFVTIVVEFLLMVFCKTNI---RHIGSIMIGITIIILFTFPYSF 219
P + ++ + C + I + + +
Sbjct: 481 FPLSYSYAALIGLFASLACYRRMQHPARYALPSIVVAFCLYLGWLSGQ 528
>gi|242279647|ref|YP_002991776.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio salexigens DSM 2638]
gi|242122541|gb|ACS80237.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio salexigens DSM 2638]
Length = 801
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 71/249 (28%), Gaps = 26/249 (10%)
Query: 14 ETTIEGIARLS-PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ + LS P FD F ++ I FY + + S +
Sbjct: 342 GLFLAVVVILSFSPLSV-----FDLGFQLSVLAVAGISLFYPVFARLMPSGHSLLAKAAR 396
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+ + + +I +F + L NIL +PI+ VV+P +
Sbjct: 397 F--------VLAVFFVSLSANIALLPIIIWNFGVLTPNFLF-NILFVPIIGSVVMPICGV 447
Query: 133 AILLMILSLDNIPFGVMAWG---LDIIIHIAHRISVAH----NEFCIGRIPETSFVTIVV 185
LL + + G + ++ + F +V+
Sbjct: 448 GGLLFSYISPELSHSLFGLGAKVFEWLLQLVRDAVSLGLLPEYAFYRPHWEGLLIYYLVL 507
Query: 186 EFLLMVFC----KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
+L+V + + +++ + P D+L + + V +
Sbjct: 508 GAVLLVIYGNSRQARLMLFLVVLLFGVRLSGEFGPERVRMDVLDTGQSQCVVITGPKGTR 567
Query: 242 SNYSNPPSF 250
+ F
Sbjct: 568 TVVDGGGGF 576
>gi|330966264|gb|EGH66524.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 738
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 25/176 (14%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S +W S ++
Sbjct: 314 VLIVEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGSWSWWQSWTRAQ 358
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P LI LL+
Sbjct: 359 WLIAIGLLPILLALNLP---------ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPFP 409
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + L+ + ++ A + +P +++ ++ +++ K
Sbjct: 410 VVGEGLLWLAGGALEWLFVFLGWVAEALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 465
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 79/253 (31%), Gaps = 16/253 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ +L P G P FD+ + I A G ++ + + ++
Sbjct: 123 SGERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQR 182
Query: 73 ISSI--KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ ++ + +G S+ + + ++L I ++
Sbjct: 183 LLAVDAQGREGGLAALVLGDGSGLSSGDW------QVLQDTGTVHLLVISGQHIGLLAGV 236
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ A++ L A I+ G ++V +L
Sbjct: 237 IYALVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVL- 292
Query: 191 VFCKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+ RH+G + +I +++ + P +S + ++ + + ++S
Sbjct: 293 -LWRLRFRHLGVVWPFLISFNAVLIVEPLVTLQPGFWLSFAAVGILVLIFSGRLGSWSWW 351
Query: 248 PSFIFSQWKSALI 260
S+ +QW A+
Sbjct: 352 QSWTRAQWLIAIG 364
>gi|255320327|ref|ZP_05361511.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter radioresistens SK82]
gi|262379387|ref|ZP_06072543.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
radioresistens SH164]
gi|255302522|gb|EET81755.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter radioresistens SK82]
gi|262298844|gb|EEY86757.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
radioresistens SH164]
Length = 812
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 20/190 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + A I + I + + WK+ + ++ +
Sbjct: 372 AFWLSF---GACFILLRIYESIDRQPAQPAFNWKQ----RVLTAGKLLIESQGKIFIALF 424
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL----MILSLDNIPFGVMAWGL 153
++ F + + NIL IP+L VV+P ++A L L L + F GL
Sbjct: 425 PLVLIFFKQVSWIAPLTNILVIPLLGAVVVPLDILAACLSYIISPLGL--LLFHCSDLGL 482
Query: 154 DIIIHIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++ + I + + + V++ + +++ ++ I ++
Sbjct: 483 NLGLWILEILDHLFNPQLQGIAFTPLLIVSLSIGLIILYLPRS------VIPKAWALLCF 536
Query: 213 FTFPYSFSPD 222
S +PD
Sbjct: 537 VPVFTSRAPD 546
>gi|197263804|ref|ZP_03163878.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197242059|gb|EDY24679.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
Length = 672
Score = 61.4 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 217 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 270
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 271 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 319
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
IP L ++L L+ + + L + ++ ++ +
Sbjct: 320 TIPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 376
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 377 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 436
Query: 239 TLIS 242
+I
Sbjct: 437 KVIL 440
>gi|304436888|ref|ZP_07396852.1| DNA internalization-related competence protein ComEC/Rec2
[Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370087|gb|EFM23748.1| DNA internalization-related competence protein ComEC/Rec2
[Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 814
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 76/231 (32%), Gaps = 31/231 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF +F + + + + + ++ + + +I
Sbjct: 359 LFHISFQLSFLATAGLLFLAPV----------LAGKVHRLPRLV-----SMAFSITIAAQ 403
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
L +F+ + + L+AN++ +PI+ ++I I+ +L L I F +
Sbjct: 404 LMVLPVLAWYFNQVSISALLANLIVVPIVELIIIMGLFAGIVTYLLPLLGGILFAADSVL 463
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCK-------TNI---RHIG 201
L I + ++ + + V V L++ + + RHI
Sbjct: 464 LGISFELTRALAALPLSKVWLPSMGLFPSVCYYVVILILCAPSEMRRKILSRLLAYRHIV 523
Query: 202 SIMIGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKNTLISNYSNPP 248
+++ ++ + + ++ + +G+ +V + +
Sbjct: 524 AVLCLALLVGVCAWRMIMPREMAVHFIDVGQGDCALVVTPHGHAMLFDTGG 574
>gi|308186259|ref|YP_003930390.1| hypothetical protein Pvag_0739 [Pantoea vagans C9-1]
gi|308056769|gb|ADO08941.1| Uncharacterized protein ycaI [Pantoea vagans C9-1]
Length = 755
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 58/184 (31%), Gaps = 19/184 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + + +Y + W ++ ++
Sbjct: 333 FWLSVLAVGMLLVWYHWFPLPARFRHQRRWIPLQLLHLQAGM------------MILMVP 380
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ F+ I + L+AN++AIP++SF+ +P +A+LL + L +G L + +
Sbjct: 381 LQVAIFNGISLTALVANVVAIPVVSFITMPLVTLAMLLPVAHLSAFFWGAADLSLRALFY 440
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+++ + V + ++ + + + +
Sbjct: 441 C---LTLLPPGWWPLNGTVWFTVMVWGG---LILWRAQF-FFSLPLSSCALALTMILSRQ 493
Query: 219 FSPD 222
P+
Sbjct: 494 PEPE 497
>gi|292490662|ref|YP_003526101.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus halophilus Nc4]
gi|291579257|gb|ADE13714.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus halophilus Nc4]
Length = 790
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 66/203 (32%), Gaps = 19/203 (9%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFY-SIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P PG F + ++A+ + + ++ + Q +
Sbjct: 347 DPLSALAPG-----FWLSFGAVAALMMGMTEFRPLPSPQSASFNPVSHRLGRLWQEWGKA 401
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI-PAGLIAILLMILSLD 142
+ + L+ F + + + N++A+P + +++ P L +LL+ L
Sbjct: 402 -----QWVVALGLAPLLLYQFQRLSLVAPLTNLVAVPWMGLLIVPPLLLGTLLLIPFPLV 456
Query: 143 NIPFG-VMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT-NIRH 199
L ++ + + + R P ++ LL++ + R
Sbjct: 457 GTALINFADTLLALLWGLLSGCATLPMAQWEQYRPPLWVLPPAILGSLLLLAPRGLPGRW 516
Query: 200 IGSIMIGITIIILFTFPYSFSPD 222
+G + +++LF P
Sbjct: 517 LGLV----ALLVLFLTPPPRPAH 535
>gi|260556525|ref|ZP_05828743.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
baumannii ATCC 19606]
gi|260409784|gb|EEX03084.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
baumannii ATCC 19606]
Length = 810
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 75/251 (29%), Gaps = 18/251 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P G F Y + Y +
Sbjct: 342 LLLKQPIKPFTLLVYSASLLLLMDPFSVLSAG-----FWLSYGACFILLRIYQTIAQLPE 396
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + K F++++ + S + F I + NI+A+PI
Sbjct: 397 QHFLSLSS-------KMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 449
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 450 VGGVIVPLNIMAACAWFVIKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTP 507
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
S + I +++ K + I+ + ++I+ ++L +G + L
Sbjct: 508 LSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNILDVGQGQAIFLQHP 567
Query: 238 NTLISNYSNPP 248
+
Sbjct: 568 EQNWLIDTGGS 578
>gi|119774473|ref|YP_927213.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella amazonensis SB2B]
gi|119766973|gb|ABL99543.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella amazonensis SB2B]
Length = 765
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 59/201 (29%), Gaps = 26/201 (12%)
Query: 1 MLSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L++++++ P+ P P G F + I + P
Sbjct: 291 LLTLSRRFASPWERLLYALAAVLFLDPLSPLSAG-----FWLSFGAIVIMLLLLDRPPAH 345
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+K ++ + + ++ F + V+ L N+L +
Sbjct: 346 LEGVPG---------RLKHYLMSLVTLQLALSIGLGVLQLVL--FGGVSVHSLWINLLMV 394
Query: 120 PILSFVVIPAGLIAI----LLMILSLDNIPFGVMAWGLDIII---HIAHRISVAHNEFCI 172
P S V IP L + LL+ + + L +I + +
Sbjct: 395 PWFSLVAIPLALAGLVFFVLLLPFGI--LADWAFTPALMALIPLDGLLTFSDHLPGAWIS 452
Query: 173 GRIPETSFVTIVVEFLLMVFC 193
+ + + +++F
Sbjct: 453 VPAQLIAPLCFAIAGAVLLFL 473
>gi|226311586|ref|YP_002771480.1| hypothetical protein BBR47_19990 [Brevibacillus brevis NBRC 100599]
gi|226094534|dbj|BAH42976.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 800
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 54/184 (29%), Gaps = 21/184 (11%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
G L P L+ F + + F ++ ++
Sbjct: 337 AGALILMLLMNPYQ--LWHVGFQLSFAVTLGLIIFVPYSLHVF---------------VR 379
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ + FLI HFH + N++ PILS + +P G IA++L
Sbjct: 380 VPVWIRTLLAVTLSAQLVSFPFLIYHFHLFSPVSWLVNLVVTPILSAIALPFGYIAVVLD 439
Query: 138 IL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ L IP + L I I F P ++ + +
Sbjct: 440 FVHPFLAVIPVWLSTAMLKWIHLPLFAIEKMRLPFTYWPHPSWWWLALYT--CFLGALPI 497
Query: 196 NIRH 199
+ R
Sbjct: 498 SWRL 501
>gi|319400924|gb|EFV89143.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus epidermidis FRI909]
Length = 738
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 2/140 (1%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ + P I L P + +F + + I
Sbjct: 245 IYAVYTGFVPSAMRAISIAIIILMLPIHFRKSSIHVLSFIFVLMIVLNPQFINHIGFQFS 304
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
S K I + I + + I HF+ GL++N++ +P
Sbjct: 305 FLISLFIILTKP--YISGLKPLKCLFIISFLAQLGSIVINIYHFNQFQWIGLLSNLIFVP 362
Query: 121 ILSFVVIPAGLIAILLMILS 140
SF++ P+ +I +L+
Sbjct: 363 FYSFILFPSVIIYFILIHFF 382
>gi|118579803|ref|YP_901053.1| DNA internalization-related competence protein ComEC/Rec2
[Pelobacter propionicus DSM 2379]
gi|118502513|gb|ABK98995.1| DNA internalization-related competence protein ComEC/Rec2
[Pelobacter propionicus DSM 2379]
Length = 808
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 78/254 (30%), Gaps = 23/254 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ DP A + + P P LF +F + + G +P+++
Sbjct: 332 LYVERETDPVNALLVSAMMLVVVNP-----PSLFHISFQLSFLALW--GMVLLVPRIMGR 384
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + + + S + + L+ F+ + G++AN L +P+
Sbjct: 385 FGSIRRGWARSLLR---------FCAVSCAASIATVVPLLYVFNQASLNGILANFLVVPL 435
Query: 122 LSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
L + + AG ++LL+ + L + + + + + G
Sbjct: 436 LGYGAVLAGFCSLLLVPVCAPLARLFMWATGKLVAVSNRLVEEFARLPLITFGGITALDM 495
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF-----TFPYSFSPDLLISEKGNLVAL 234
++ L +R ++ + I + +L +G + +
Sbjct: 496 LAFLLFMGLATFVRPGRVRTTLCLLTPLLAIAIHFSTPPLADGRLHVTMLSVGQGESLLI 555
Query: 235 VDKNTLISNYSNPP 248
Sbjct: 556 RLPPGEAMLVDGGG 569
>gi|15837680|ref|NP_298368.1| DNA uptake protein [Xylella fastidiosa 9a5c]
gi|9106028|gb|AAF83888.1|AE003944_5 DNA uptake protein [Xylella fastidiosa 9a5c]
Length = 836
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 24/161 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + +
Sbjct: 393 GFWLSFAGVAWLLWCMQDGHAAPWRGFLSA---------------------QGVATLGLL 431
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
F + F + G AN++AIP+ +FVV+P L+ L L + + + +
Sbjct: 432 PFTVALFGQVSFVGPFANLIAIPLWTFVVVPLALLGTALEALVPGWGSPMWRLGGTCFEW 491
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ ++ + + + ++ ++ +
Sbjct: 492 SWQLFEYLAQTDFALWWLPESDGVALWLALLGAFWLLLPRG 532
Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 5/195 (2%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY--SIPKMIYSSESHN 66
+ A + + RL P PG FD + +GI A GY ++ + + ++ N
Sbjct: 180 NALHAGSVWQLHVRLRAPHSLLNPGGFDSERYALAQGIVATGYVRAPTMAREVAAATGIN 239
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W + I + L+E + + + + GL +++AI +
Sbjct: 240 AWRERMSVRIADAVLSEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHVGM 298
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ ++ ++ L L + + + A G T +++
Sbjct: 299 VAGACALLVSLLWRLFPHLAWRCPRPLA--MALIAVPAAAGYTVLAGASLPTVRTALMIG 356
Query: 187 FLLMVFCKTNIRHIG 201
+ + G
Sbjct: 357 IVALARLTRRRAMPG 371
>gi|83589439|ref|YP_429448.1| DNA internalization-related competence protein ComEC/Rec2 [Moorella
thermoacetica ATCC 39073]
gi|83572353|gb|ABC18905.1| DNA internalization-related competence protein ComEC/Rec2 [Moorella
thermoacetica ATCC 39073]
Length = 809
Score = 61.0 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 71/237 (29%), Gaps = 36/237 (15%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D F + I + + W + + I
Sbjct: 356 SLYDSGFQLSFTATWGIV------YLYPLLDDLLAWLPAWRAYL----------VIPLAA 399
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA-GLIAILLMILSLDNIPFGVMAW 151
+ + +F + + L AN++ ++ +V A+ L+ L L F +
Sbjct: 400 QVATLPLVAYYFSFVSLLSLPANLITAGLVGAIVTLGLAASALALVSLPLAGTVFNALGP 459
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPET------SFVTIVVEFL--------LMVFCKTNI 197
+++++ ++ P V I++ L + + ++
Sbjct: 460 LVNLMLAFLAGLAGLPGMTLPLATPSPLGVAGYYLVLIILRELWLRRREPRWLALWRWHL 519
Query: 198 RHIGSIMIG-ITIIILFTFPYSFSPDLLIS----EKGNLVALVDKNTLISNYSNPPS 249
R +G + + ++++ + +L ++ +G+ + L
Sbjct: 520 RELGVVAALTLATLLVYLYHPGQPGELGVTFIDVGQGDAIYLATPGGRHILVDGGGR 576
>gi|238913244|ref|ZP_04657081.1| hypothetical protein SentesTe_19264 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 754
Score = 61.0 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 299 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 353 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 402 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 458
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 459 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 518
Query: 239 TLIS 242
+I
Sbjct: 519 KVIL 522
>gi|71275595|ref|ZP_00651880.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Dixon]
gi|71899492|ref|ZP_00681649.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Ann-1]
gi|71163486|gb|EAO13203.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Dixon]
gi|71730712|gb|EAO32786.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Ann-1]
Length = 825
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 24/161 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + +
Sbjct: 382 GFWLSFAGVAWLLWCMQDGHAAPWRGFLSA---------------------QGVATLGLL 420
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
F + F + G +AN++AIP+ +FVV+P L+ L L + + +
Sbjct: 421 PFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLGTALEALVPGWGSPMWRLGGNCFQW 480
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ ++ + + + ++ ++ +
Sbjct: 481 SWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWLLLPRG 521
Score = 39.8 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 64/199 (32%), Gaps = 13/199 (6%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY--SIPKMIYSSESHN 66
A + + RL P PG FD + +GI A GY ++ + + ++ N
Sbjct: 169 SELHAGSVWQLHVRLRAPHSLLNPGGFDSERYALAQGIVATGYVRAPTMARELAAATGIN 228
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W + + I + L E + + + + GL +++AI
Sbjct: 229 AWRERMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHV-- 285
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT---- 182
+ +++SL F +AW +A + + S T
Sbjct: 286 --GMVAGACALLVSLLWRVFPHLAW--RWPRPLAMALIAVPAAAGYTVLAGASLPTVRTA 341
Query: 183 IVVEFLLMVFCKTNIRHIG 201
+++ + + G
Sbjct: 342 LMIGIVALARLTRRRAMQG 360
>gi|291616909|ref|YP_003519651.1| YcaI [Pantoea ananatis LMG 20103]
gi|291151939|gb|ADD76523.1| YcaI [Pantoea ananatis LMG 20103]
Length = 764
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 19/185 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + +Y + W ++ ++
Sbjct: 341 SFWLSVLAVGMLLTWYHWFPLAARFRHARRWLPIQLLHLQSGM------------MILML 388
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F+ I + LIAN+LAIP++SFV +P L+A+LL + ++ + L ++
Sbjct: 389 PLQAGLFNGISITALIANLLAIPVVSFVTVPLILVAMLLPVPAISTWFWLAADGSLRFLL 448
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+++ + F+ +V LL +T I + F
Sbjct: 449 T---SLALLPPGWW-PLQGAAFFMLMVWGGLL--VWRT-GALFSLPWSCSAIALAMVFSR 501
Query: 218 SFSPD 222
+ P+
Sbjct: 502 HYKPE 506
>gi|225027578|ref|ZP_03716770.1| hypothetical protein EUBHAL_01835 [Eubacterium hallii DSM 3353]
gi|224955094|gb|EEG36303.1| hypothetical protein EUBHAL_01835 [Eubacterium hallii DSM 3353]
Length = 816
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 70/250 (28%), Gaps = 24/250 (9%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + + L P G + I +IG I K ++ S N
Sbjct: 349 ISSMSLAGILMLLEHPWRLLESGC-----VISFASIFSIGIILPIAKELWEKRSQNRLVA 403
Query: 71 KKI---SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ S ++ ANI S S + L++ F+ Y ++ N+ IP +S ++I
Sbjct: 404 GEFPTESPRRKIIRQAFFANI--VISMSITPLLLRFFYQWSPYSILLNMFVIPAMSPLLI 461
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIII------HIAHRISVAHNEFCIGRIPETS-- 179
A L +L + + + ++ I + + P
Sbjct: 462 SAVLGGLL----GFFSYVSAFLG-CIPAVVLLRTFEMIFRLVKQIPGAVIVTGCPPWWEI 516
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIII-LFTFPYSFSPDLLISEKGNLVALVDKN 238
+E + I I F + +L +G + +
Sbjct: 517 LFLYFIEISFFFLWYYRQKGFSVIFCLFLIAGRCFFTVPALKITMLDVGQGECIFIKMPT 576
Query: 239 TLISNYSNPP 248
Sbjct: 577 GESMLIDGGS 586
>gi|320085225|emb|CBY95010.1| Uncharacterized protein ycaI [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 754
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 299 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 353 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 402 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 458
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 459 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 518
Query: 239 TLIS 242
+I
Sbjct: 519 KVIL 522
>gi|167855113|ref|ZP_02477885.1| alanyl-tRNA synthetase [Haemophilus parasuis 29755]
gi|167853748|gb|EDS24990.1| alanyl-tRNA synthetase [Haemophilus parasuis 29755]
Length = 758
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 15/154 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI-PKMIYSSE 63
+ Y P+ + G+ L +F ++++ +Y P +
Sbjct: 295 RRHYTPWQL--WLRGVVLLVVFDPLTLLSD---SFWLSVLAVASLIIWYQAFPLKRFDFV 349
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ K+ I + F + L+AN++ +P+ S
Sbjct: 350 KNMQNRVMKLLLELFHLQLGIWLVFS--------PIQLSFFDGTSPFALLANLIIVPLYS 401
Query: 124 FVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDII 156
F++IP L ++L + + + WG+D I
Sbjct: 402 FILIPLILFSLLTDNLFQTWWLCHQLAEWGIDWI 435
>gi|307151952|ref|YP_003887336.1| ComEC/Rec2-like protein [Cyanothece sp. PCC 7822]
gi|306982180|gb|ADN14061.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 7822]
Length = 732
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 58/166 (34%), Gaps = 19/166 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + ++ + +K+ + + I IG S
Sbjct: 357 IWDLGFQLSFLATFSLIVTVPPLE-------------QKLDFLPPTISPMIAIPIGV--S 401
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
L++ F + Y ++ NI+ P+++ + + L A + ++ L ++ +
Sbjct: 402 VWTLPLLMQSFSVVATYSILCNIITAPLVTVISLGGMLSAAVALLFPLGGSAIAWLLYYP 461
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
++I IA + +G++ V I V L+
Sbjct: 462 TLLLIAIAKFFVNLPASSYAVGKLSVGVMVLIYVG--LLAIWLNRW 505
>gi|225016334|ref|ZP_03705526.1| hypothetical protein CLOSTMETH_00237 [Clostridium methylpentosum
DSM 5476]
gi|224950877|gb|EEG32086.1| hypothetical protein CLOSTMETH_00237 [Clostridium methylpentosum
DSM 5476]
Length = 730
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/214 (10%), Positives = 60/214 (28%), Gaps = 19/214 (8%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ L P A D +F + I +
Sbjct: 314 GATVVILLLNPFAVA-----DVSFLLSFSATLGILLVSGKIAAFGK---------RFCMG 359
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
++ ++ + + F V ++N++A + + +++ L L
Sbjct: 360 VRLLEGICENFSVSLAAVLFTAPVSMLAFQEFSVIAPVSNLVACLMFAPLLVAGFLTGAL 419
Query: 136 LMILSLDNIPFGVMAWGLDIII-HIAHRISVAHNEFCIGRIPET-SFVTIVVEFLLM-VF 192
M+ G + L ++ IA + +V + + +
Sbjct: 420 GMVWQGAGELLGRITRSLAWMLSKIAEFFANFPYSHLPLGFGFVKVWVLCAAGLIGLSML 479
Query: 193 CKTNIRHIG--SIMIGITIIILFTFPYSFSPDLL 224
++ R + +++ I ++ F D++
Sbjct: 480 FRSRRRMVRYSALLSVIVLLGGILSHQVFFRDVV 513
>gi|219870708|ref|YP_002475083.1| recombination protein 2 [Haemophilus parasuis SH0165]
gi|219690912|gb|ACL32135.1| recombination protein 2 / DNA internalization-related competence
protein ComEC/Rec2 / predicted membrane metal-binding
protein [Haemophilus parasuis SH0165]
Length = 759
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 15/154 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI-PKMIYSSE 63
+ Y P+ + G+ L +F ++++ +Y P +
Sbjct: 296 RRHYTPWQL--WLRGVVLLVVFDPLTLLSD---SFWLSVLAVASLIIWYQAFPLKRFDFV 350
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ K+ I + F + L+AN++ +P+ S
Sbjct: 351 KNMQNRVMKLLLELFHLQLGIWLVFS--------PIQLSFFDGTSPFALLANLIIVPLYS 402
Query: 124 FVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDII 156
F++IP L ++L + + + WG+D I
Sbjct: 403 FILIPLILFSLLTDNLFQTWWLCHQLAEWGIDWI 436
>gi|189485503|ref|YP_001956444.1| ComEC-like cytoplasmic membrane protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287462|dbj|BAG13983.1| ComEC-like cytoplasmic membrane protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 603
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/177 (11%), Positives = 55/177 (31%), Gaps = 17/177 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ ++ + + I + P LF +F Y + FY ++
Sbjct: 268 LSLGREPLIYNSLALSALIILIFQPQQ-----LFTASFQMSYSATIGVVCFYKNVLGLFR 322
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ K ++ ++ + +F I + + NI+ P+
Sbjct: 323 N--------VKGKILRFFCGV---LSVTISAQLILIPVCMHYFGKISIISFVTNIIVTPL 371
Query: 122 LSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
++ + IL I + + +++ L ++ + + + P
Sbjct: 372 TGIILYLGIIFYILTFIFHNAAALCSFILSLLLKFVLSVTIFLGNIKFAVVLIPKPS 428
>gi|170729597|ref|YP_001775030.1| DNA uptake protein [Xylella fastidiosa M12]
gi|167964390|gb|ACA11400.1| DNA uptake protein [Xylella fastidiosa M12]
Length = 825
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 24/161 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + +
Sbjct: 382 GFWLSFAGVAWLLWCMQDGHAAPWRGFLSA---------------------QGVATLGLL 420
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
F + F + G +AN++AIP+ +FVV+P L+ L L + + +
Sbjct: 421 PFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLGTALEALVPGWGSPMWRLGGNCFQW 480
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ ++ + + + ++ ++ +
Sbjct: 481 SWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWLLLPRG 521
Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 65/198 (32%), Gaps = 9/198 (4%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY--SIPKMIYSSESHN 66
A + + RL P PG FD + +GI A GY ++ + + ++ N
Sbjct: 169 SELHAGSVWQLHVRLRAPHSLLNPGGFDSERYALAQGIVATGYVRAPTMARELAAATGIN 228
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W + + I + L E + + + + GL +++AI
Sbjct: 229 AWRERMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHV-- 285
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ +++SL F +AW +A + + S T+
Sbjct: 286 --GMVAGACALLVSLLWRVFPHLAW--RWPRPLAMALIAVPAAAGYTVLAGASLPTVRTA 341
Query: 187 FLLMVFCKTNIRHIGSIM 204
++ + + ++
Sbjct: 342 LMIGIVALARLTRRRAMP 359
>gi|205360686|ref|ZP_03224692.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|205347803|gb|EDZ34434.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
Length = 737
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 335
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 336 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 385 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 441
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 442 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 501
Query: 239 TLIS 242
+I
Sbjct: 502 KVIL 505
>gi|169795042|ref|YP_001712835.1| competence factor involved in DNA uptake [Acinetobacter baumannii
AYE]
gi|215482592|ref|YP_002324784.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB307-0294]
gi|332851111|ref|ZP_08433220.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6013150]
gi|332869616|ref|ZP_08438827.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6013113]
gi|169147969|emb|CAM85832.1| Competence factor involved in DNA uptake [Acinetobacter baumannii
AYE]
gi|213988324|gb|ACJ58623.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB307-0294]
gi|332730275|gb|EGJ61600.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6013150]
gi|332732663|gb|EGJ63895.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6013113]
Length = 810
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 75/251 (29%), Gaps = 18/251 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P G F Y + Y +
Sbjct: 342 LLLKQPIKPFTLLVYSASLLLLMDPFSVLSAG-----FWLSYGACFILIRIYQTIAQLPE 396
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + K F++++ + S + F I + NI+A+PI
Sbjct: 397 QHFLSLSS-------KMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 449
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 450 VGSVIVPLNIMAACAWFVIKPFG--NMLFHFNDMLLSILLSYLGLLEKLSLTLQGISLTP 507
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
S + I +++ K + I+ + ++I+ ++L +G + L
Sbjct: 508 LSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNILDVGQGQAIFLQHP 567
Query: 238 NTLISNYSNPP 248
+
Sbjct: 568 QQNWLIDTGGS 578
>gi|91218486|ref|ZP_01255426.1| putative competence related membrane protein [Psychroflexus torquis
ATCC 700755]
gi|91183367|gb|EAS69770.1| putative competence related membrane protein [Psychroflexus torquis
ATCC 700755]
Length = 670
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 62/193 (32%), Gaps = 18/193 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L+ +K + P +F F Y + +I +YS
Sbjct: 312 LNYRRKTSAINTLALSAFFLIMINPYL-----IFQVGFQLSYMAVISIVILQPRLSKLYS 366
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + ++ + +FH P L++N++ +P
Sbjct: 367 PR----------YYLDKKVWD--ITSVTITAQLGVLPLSLYYFHQFPGLFLVSNLIILPG 414
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSF 180
L ++ +I L ++ L + A LD ++ + I+ + +T
Sbjct: 415 LGILLGGGVIIIALSLLDLLPETLVSLYASSLDALLWVVDWIASQESLIINDIYFTKTIL 474
Query: 181 VTIVVEFLLMVFC 193
++ +V F ++
Sbjct: 475 ISSLVLFFSLILW 487
>gi|161614779|ref|YP_001588744.1| hypothetical protein SPAB_02531 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161364143|gb|ABX67911.1| hypothetical protein SPAB_02531 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 624
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 169 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 222
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 223 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 271
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 272 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 328
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 329 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 388
Query: 239 TLIS 242
+I
Sbjct: 389 KVIL 392
>gi|200390993|ref|ZP_03217604.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|199603438|gb|EDZ01984.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
Length = 737
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 335
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 336 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 385 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 441
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 442 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 501
Query: 239 TLIS 242
+I
Sbjct: 502 KVIL 505
>gi|165976182|ref|YP_001651775.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|165876283|gb|ABY69331.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 764
Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 17/235 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ Y P+ + + L P +F + ++ +Y S
Sbjct: 294 FLRYHYTPWQYWWRVVTVLLLFDPITVLS-----DSFWLSILAVMSLLIWYQY---FPLS 345
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++K I + L I G + F I + L AN++ +P+
Sbjct: 346 AFLRKFAYRKWGKIVRFCLGLIHLQCGIL--LIFTPVQFFFFEGISLTALPANLVIVPLY 403
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAH---RISVAHNEFCIGRIPET 178
SFV++P LI +L + + ++ + LD + I+ +S + I +
Sbjct: 404 SFVLVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWL--IIDL 461
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ + I+ L + ++ + LF + + G +A
Sbjct: 462 AILFILYGILHARTALYWYKRYALLLCCQCVFYLF-QLDKVPLQWITFDVGQGLA 515
>gi|83816444|ref|YP_444172.1| DNA internalization-related competence protein ComEC/Rec2
[Salinibacter ruber DSM 13855]
gi|83757838|gb|ABC45951.1| DNA internalization-related competence protein ComEC/Rec2
[Salinibacter ruber DSM 13855]
Length = 814
Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 55/213 (25%), Gaps = 20/213 (9%)
Query: 28 GPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
P LFD F +S I + + +
Sbjct: 370 AVRPPMLFDVGFQLSMAAVSGIVTLNPRFLEMVPDRYRTSEALDWV---------LSTGT 420
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIP 145
+ L+ HF + V GL+ N++ IP + A + L + +
Sbjct: 421 TSAAAILGTAPVLLYHFGWVSVAGLLLNMVGIPCTGLALTSAIATVAVGGLWPTAAASFG 480
Query: 146 FGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPE-TSFVTIVVEFLLMVFC---KTNIRHI 200
L ++ + + P+ + + + + R I
Sbjct: 481 SAA-DVFLQGLLATSRYGAAWFSWAGIRMATPDLWELTALGAGLIAVAQWPRPRLRWRWI 539
Query: 201 ---GSIMIGITIIILFTFPYSFSPDLLISEKGN 230
G M + + + D++ + G
Sbjct: 540 VIGGLFMTASVWGPVVGGGTAPTLDIVFFDVGQ 572
>gi|303251427|ref|ZP_07337603.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307252338|ref|ZP_07534235.1| hypothetical protein appser6_8560 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649659|gb|EFL79839.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306860260|gb|EFM92276.1| hypothetical protein appser6_8560 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 764
Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 17/235 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ Y P+ + + L P +F + ++ +Y S
Sbjct: 294 FLRYHYTPWQYWWRVVTVLLLFDPITVLS-----DSFWLSILAVMSLLIWYQY---FPLS 345
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++K I + L I G + F I + L AN++ +P+
Sbjct: 346 AFLRKFAYRKWGKIVRFCLGLIHLQCGIL--LIFTPVQFFFFEGISLTALPANLVIVPLY 403
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAH---RISVAHNEFCIGRIPET 178
SFV++P LI +L + + ++ + LD + I+ +S + I +
Sbjct: 404 SFVLVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWL--IIDL 461
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ + I+ L + ++ + LF + + G +A
Sbjct: 462 AILFILYGILHARTALYWYKRYALLLCCQCVFYLF-QLDKVPLQWITFDVGQGLA 515
>gi|159026475|emb|CAO86447.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 719
Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 82/257 (31%), Gaps = 36/257 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + ++P + + + + I S
Sbjct: 351 IWDLGFQLSFLATLGLII--TVPLLKNKIDYFPNLIAEPV-------------AISLAAS 395
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
L+ F+ I +Y + NI+ P+++ + + A L +I L +I ++ +
Sbjct: 396 LWTMPLLMFTFNSISLYNIPINIITTPLITLISLGGVFTAFLGLIYPPLGSIGASILYYP 455
Query: 153 LDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMV--FC-KTNIRHIGSIMIG-- 206
L +++ I H S+ + + G++ + I + L+ + +G ++
Sbjct: 456 LKLLLQITHFFSLLPFSTYSTGKLSLGVMLIIYICLTLICCNLWFRQRWHLVGLFILTLI 515
Query: 207 --------ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSA 258
T+ + P ++I +GN + + + + +
Sbjct: 516 LIPIIYQHFTLTQVTVLATKSQPVIIIQNRGNTLLINGEE------PATARYTVLPFLRQ 569
Query: 259 LITPFHEAPHVQKEDLQ 275
+ Q
Sbjct: 570 EGINQIQGAITVNNSAQ 586
>gi|307244345|ref|ZP_07526459.1| ComEC/Rec2-like protein [Peptostreptococcus stomatis DSM 17678]
gi|306492311|gb|EFM64350.1| ComEC/Rec2-like protein [Peptostreptococcus stomatis DSM 17678]
Length = 411
Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 27/140 (19%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++ DP I I P +++ +F + + +I +
Sbjct: 233 FVDRRLDPINILALIASIMVYLNPYI-----IYNISFQLSFLAVLSIVIY---------- 277
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+++ + ++ +F + GLI NIL +P +
Sbjct: 278 ----------SKYLRKYIYFNFLNTC-LAANILTFPLVVYNFKTFSMVGLIGNILILPFI 326
Query: 123 SFVVIPAGLIAILLMILSLD 142
+V +I++LL +SLD
Sbjct: 327 GLIVF-LDMISLLLYGISLD 345
>gi|300691900|ref|YP_003752895.1| hypothetical protein RPSI07_2256 [Ralstonia solanacearum PSI07]
gi|299078960|emb|CBJ51620.1| conserved membrane protein of unknown function, ComEC/Rec2 domain
[Ralstonia solanacearum PSI07]
Length = 845
Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 68/234 (29%), Gaps = 16/234 (6%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P G F + ++ I I +
Sbjct: 353 DRSVPASLSLCWAAAAVALVDPWAVMSAG-----FWLSFGAVAVIFLAARIVAADAWEDG 407
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ I+ A I + + F + V +AN LAIP++SF
Sbjct: 408 R-----RPAWPIRAWRGLRGAARIQLAVTFGLLPLTLLLFQQVSVVSAVANALAIPVVSF 462
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTI 183
V P LI L ++ +++ + P +++
Sbjct: 463 VTTPLALIGAAL-PEPWSPPVLAWAEASFGWLVSWLDGLAMPGWSVWVAPVAPAWAWMPA 521
Query: 184 VVEFLLMVFCKTN----IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
VV LL++ R G+I++ ++ P ++ + G A
Sbjct: 522 VVGVLLLLVPGGCRAWAWRAQGAILLLPMLLARAPVPPPGEFRMVAFDIGQGAA 575
>gi|126208244|ref|YP_001053469.1| recombination protein 2 [Actinobacillus pleuropneumoniae L20]
gi|126097036|gb|ABN73864.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 764
Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 17/235 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ Y P+ + + L P +F + ++ +Y S
Sbjct: 294 FLRYHYTPWQYWWRVVTVLLLFDPITVLS-----DSFWLSILAVMSLLIWYQY---FPLS 345
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++K I + L I G + F I + L AN++ +P+
Sbjct: 346 AFLRKFAYRKWGKIVRFCLGLIHLQCGIL--LIFTPVQFFFFEGISLTALPANLVIVPLY 403
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAH---RISVAHNEFCIGRIPET 178
SFV++P LI +L + + ++ + LD + I+ +S + I +
Sbjct: 404 SFVLVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWL--IIDL 461
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ + I+ L + ++ + LF + + G +A
Sbjct: 462 AILFILYGILHARTALYWYKRYALLLCCQCVFYLF-QLDKVPLQWITFDVGQGLA 515
>gi|193213810|ref|YP_001995009.1| ComEC/Rec2-like protein [Chloroherpeton thalassium ATCC 35110]
gi|193087287|gb|ACF12562.1| ComEC/Rec2-related protein [Chloroherpeton thalassium ATCC 35110]
Length = 736
Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 20/218 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE- 63
KK + + L P LF +F + +I Y + +
Sbjct: 333 EKKTYALNTLAFADFLILLISPK-----DLFSLSFLLSNAAVISIILLYPKLISLAIFDN 387
Query: 64 --SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI---LA 118
S W +I I ++ I I S S L F +P+ GL+AN+
Sbjct: 388 IESSKYWLLPQIGGIVKNIWQAIALTIS--ASLGVSPILGLTFGSVPLLGLLANLPVTFL 445
Query: 119 IPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIP 176
+ + + ++PA + +L + + + I I++ S I
Sbjct: 446 VSLAVYAMLPALFFNLCCAEFAALYALCAWFF---IRVSIQISNWFSQFSFAAISINASW 502
Query: 177 ETSFVTIVVEFLLMVFC--KTNIRHIGSIMIGITIIIL 212
++ + L K+ + ++I + I+
Sbjct: 503 LSALSFYLFIGFLFNLYNQKSRAKWTIFLLISLNFILF 540
>gi|293390234|ref|ZP_06634568.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950768|gb|EFE00887.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 744
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 67/189 (35%), Gaps = 14/189 (7%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + + + P +F ++ + +Y +
Sbjct: 246 RRYWTVWQFLLRVIALLIFIDPLMLLST-----SFWLSVGAVTCLIVWYQYFPLSLLQWR 300
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ ++ F ++ + + F+ I + IAN++A+P+ SF
Sbjct: 301 GHSLANSPWRKVRYVFG---LFHLQFGLLWLFTPIQLLFFNGISLNSFIANVIAVPLYSF 357
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V++P L A++ + D+ I ++ +++ IP + ++T+
Sbjct: 358 VLVPLVLFAVVTQG------VWHSWQLANDLAEKITALLTPWQDDWLAISIPHSLWITLC 411
Query: 185 VEFLLMVFC 193
+ FL +V
Sbjct: 412 LTFLFLVAL 420
>gi|190150096|ref|YP_001968621.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303252316|ref|ZP_07338482.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247747|ref|ZP_07529785.1| hypothetical protein appser2_7380 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307261248|ref|ZP_07542923.1| hypothetical protein appser12_8120 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|189915227|gb|ACE61479.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302648775|gb|EFL78965.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855777|gb|EFM87942.1| hypothetical protein appser2_7380 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306868979|gb|EFN00781.1| hypothetical protein appser12_8120 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 764
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 17/235 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ Y P+ + + L P +F + ++ +Y S
Sbjct: 294 FLRYHYTPWQYWWRVVTVLLLFDPITVLS-----DSFWLSILAVMSLLIWYQY---FPLS 345
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++K I + L I G + F I + L AN++ +P+
Sbjct: 346 AFLRKFAYRKWGKIVRFCLGLIHLQCGIL--LIFTPVQFFFFEGISLTALPANLVIVPLY 403
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAH---RISVAHNEFCIGRIPET 178
SFV++P LI +L + + ++ + LD + I+ +S + I +
Sbjct: 404 SFVLVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWL--IIDL 461
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ + I+ L + ++ + LF + + G +A
Sbjct: 462 AILFILYGILHARTALYWYKRYALLLCCQCVFYLF-QLDKVPLQWITFDVGQGLA 515
>gi|320642906|gb|EFX12107.1| ComEC family competence protein [Escherichia coli O157:H- str.
493-89]
gi|320648363|gb|EFX17018.1| ComEC family competence protein [Escherichia coli O157:H- str. H
2687]
Length = 651
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 83/250 (33%), Gaps = 30/250 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 299 RQWSGWDVWICCLAAILLMDPVVILSQSL-----WLSAAAVAALIFWYQWFPCP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 348 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L LD + + L ++ + +
Sbjct: 402 TVPLILAAMVVHLSGPLILDQGLWFLADRSLALLFL---GLKSLPEGWINIAERWQWLSF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDK 237
+ L+V + N R + ++ + + +++ + PD ++ LV ++ +
Sbjct: 459 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVYMLDVGQGLVMVIAR 516
Query: 238 NTLISNYSNP 247
N Y
Sbjct: 517 NGKAILYDTG 526
>gi|327314537|ref|YP_004329974.1| ComEC/Rec2-like protein [Prevotella denticola F0289]
gi|326945972|gb|AEA21857.1| ComEC/Rec2-like protein [Prevotella denticola F0289]
Length = 514
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 57/170 (33%), Gaps = 11/170 (6%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD F + + +I FY + + T + + + +
Sbjct: 350 SLFDIGFQLSFVSVWSILLFYPLL--------YQTLSSRYLKHCAAGRWLWGMTAVSVAA 401
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + +F + +++A+P + ++I + + ++L + + FG MA
Sbjct: 402 QLGTAPLIAFYFCRFSTVFIPGSLIAVPG-TMMIIWSSVFMLILSPFPVLSSFFGQMAGQ 460
Query: 153 LDIIIHIA-HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
L A H ++ IG + T V +LM G
Sbjct: 461 LVYCQDTALHWLASFPWA-SIGNLHVTLLQLAVYYAMLMGVWLLWSFLAG 509
>gi|78223122|ref|YP_384869.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter metallireducens GS-15]
gi|78194377|gb|ABB32144.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter metallireducens GS-15]
Length = 798
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 22/166 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ D T + P LFD +F + I I + +
Sbjct: 324 LFLERETDSLNTLTAAAFGILMFNPQA-----LFDISFQLSFLAIWGILVLTPLCMEPFG 378
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
T + A + + + ++ FH V GL+ N +A+P+
Sbjct: 379 DLREGTLK-----------KVLLFAAVSVAATIVTLLPVVHTFHRASVAGLVGNFVAVPL 427
Query: 122 LSFVVIPAGLIAILLMIL------SLDNIPFGVMAWGLDIIIHIAH 161
L + + AG A+ L+ L L I ++ I+ +A
Sbjct: 428 LGYGAVVAGFSALPLIYLFPAAAKFLLGIAAWLVRISDGIMATVAQ 473
>gi|205360022|ref|ZP_03224496.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|205341493|gb|EDZ28257.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
Length = 737
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 335
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 336 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 385 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 441
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 442 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 501
Query: 239 TLIS 242
+I
Sbjct: 502 KVIL 505
>gi|205357313|ref|ZP_03223712.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205322488|gb|EDZ10327.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 737
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 335
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 336 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 385 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 441
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 442 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 501
Query: 239 TLIS 242
+I
Sbjct: 502 KVIL 505
>gi|328554293|gb|AEB24785.1| hypothetical protein BAMTA208_13120 [Bacillus amyloliquefaciens
TA208]
Length = 783
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 77/236 (32%), Gaps = 31/236 (13%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+ F + +A+ SI K + +++ + A
Sbjct: 324 WQAGFQLSFAVSAALILSSSILKKAGKN---------RLAGL---------AMASFIAEL 365
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL------SLDNIPFGV 148
S+ FL+ HF I + N++ +P + VIP +I LL++L L + V
Sbjct: 366 SSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPFSVIGFLLLLLSRQAGEFLFYLFDLV 425
Query: 149 MAWGLDIIIHIAH-----RISVAHNEFCIGRIPETSFVTIVVE--FLLMVFCKTNIRHIG 201
M D I + A I+ + + + + F + K+ +
Sbjct: 426 MKPVHDFITYAASVDLFTMIASKPDFLSLLMLAVSVFTLFAALEKGGFLKLRKSALFFFA 485
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
+ + + + D+ + + A K T++ + ++ WK
Sbjct: 486 VLAYIMFRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYSEESWKE 541
>gi|195874043|ref|ZP_03080162.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|195630913|gb|EDX49499.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
Length = 737
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 335
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 336 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
IP L ++L L+ + + L + ++ ++ +
Sbjct: 385 TIPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 441
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 442 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 501
Query: 239 TLIS 242
+I
Sbjct: 502 KVIL 505
>gi|194445241|ref|YP_002040181.1| hypothetical protein SNSL254_A1016 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194403904|gb|ACF64126.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 737
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 335
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 336 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
IP L ++L L+ + + L + ++ ++ +
Sbjct: 385 TIPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 441
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 442 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 501
Query: 239 TLIS 242
+I
Sbjct: 502 KVIL 505
>gi|194450505|ref|YP_002044975.1| hypothetical protein SeHA_C1081 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205359285|ref|ZP_03224258.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|194408809|gb|ACF69028.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|205337144|gb|EDZ23908.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
Length = 737
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 335
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 336 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
IP L ++L L+ + + L + ++ ++ +
Sbjct: 385 TIPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 441
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 442 LPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 501
Query: 239 TLIS 242
+I
Sbjct: 502 KVIL 505
>gi|332284088|ref|YP_004415999.1| ComEC/Rec2 [Pusillimonas sp. T7-7]
gi|330428041|gb|AEC19375.1| ComEC/Rec2 [Pusillimonas sp. T7-7]
Length = 832
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 18/246 (7%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
M + PF + + + L P G F + + + S
Sbjct: 339 MYILRITTTPFRVLSLVAFVVVLLDPWALLASG-----FWLSFGAVY-VLMASSGWYGQA 392
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
++ W + + + ++ +G + FH + + + N AIP
Sbjct: 393 MGQTQLKWRQRMPEFLATATRLQLAITVGLMPLLALI------FHEVSIVSPLVNAYAIP 446
Query: 121 ILSFVVIPAGLIAI-LLMILSLDNIPF---GVMAWGLDIIIHIAHRISVAHNE-FCIGRI 175
++S +V P L+ M L+ + + LD I+ +S F +
Sbjct: 447 VISLLVTPLALLLAGSAMAPGLEFLALACAWLGHAALDAIMLPTVWLSGLRAASFHVAAA 506
Query: 176 PETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL 234
P V ++ RH+ +++ ++ P S DL + G A+
Sbjct: 507 PLWLTVIAILGLAAATLPYGIPGRHLAWLLVAPALLWWPNRPPEGSWDLHALDIGQGSAV 566
Query: 235 VDKNTL 240
+ +
Sbjct: 567 LIQTAR 572
>gi|332969250|gb|EGK08278.1| competence factor transporting permease/ATP-binding protein ComA
[Kingella kingae ATCC 23330]
Length = 759
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 69/205 (33%), Gaps = 26/205 (12%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
L P+ F + + A+ + S K +++Q+F
Sbjct: 334 VLLYQPTSVLA-----VGFWLSFGLVGALLWALS---------CRLPSRPKPYDTLRQAF 379
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + A + G + F + VY + N +AIP S ++ P L+A L
Sbjct: 380 IGQWAATL--VGGIATIFL----FGILAVYSPLVNAVAIPFFSSILTPLALVASALPFAP 433
Query: 141 LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
L + + + I++ ++ + E + P F + L+++ + +
Sbjct: 434 LQRLAAWLGEHTIHILLALSRHL----PEQAFAQPPSFLFWLTIFSTLIILLPRGTA--L 487
Query: 201 GSIMIGITIIILFTFPYSFSPDLLI 225
+ I L P + L +
Sbjct: 488 KPLACVIIASFLLYTPPAPRAPLAV 512
>gi|196039278|ref|ZP_03106584.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus NVH0597-99]
gi|196029905|gb|EDX68506.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus NVH0597-99]
Length = 579
Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 86/281 (30%), Gaps = 33/281 (11%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P ++ G+ RLS + + F Y + IG+
Sbjct: 76 IYMILAGASPSVIRASVTGVLMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 133
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 134 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYYSPYS 187
Query: 112 LIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+ NIL +P LS +V+P LI + ++ L V++ GL++
Sbjct: 188 IFLNILYVPFLSLIVLPCSIIILICMPIIPF-LAKSFANVLSIGLNLSNDFLSYCESLPF 246
Query: 169 -EFCIGRIPETSFVTIVVEFL-LMVFCKTNIR------HIGSIMIGITIIILFTFPYSFS 220
G+ P V + +++ + I G + T ++ +
Sbjct: 247 IRLNFGQTPILLVALYCVSIISILMVWERRISKGMMFIFAGIFLFISTCHYVYPYFRESG 306
Query: 221 PDLLIS-EKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
+ +G+ + + D+ + + +W+
Sbjct: 307 SVTFLDVGQGDAILIRLPYDQEIYLIDTGGTIRLNKEEWQR 347
>gi|261867902|ref|YP_003255824.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413234|gb|ACX82605.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 744
Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 67/189 (35%), Gaps = 14/189 (7%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + + + P +F ++ + +Y +
Sbjct: 246 RRYWTVWQFLLRVIALLIFIDPLMLLST-----SFWLSVGAVTCLIVWYQYFPLSLLQWR 300
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ ++ F ++ + + F+ I + IAN++A+P+ SF
Sbjct: 301 GHSLANSPWRKVRYVFG---LFHLQFGLLWLFTPIQLLFFNGISLNSFIANVIAVPLYSF 357
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V++P L A++ + D+ I ++ +++ IP + ++T+
Sbjct: 358 VLVPLVLFAVVTQG------AWHSWQLANDLAEKITALLTPWQDDWLAISIPHSLWITLC 411
Query: 185 VEFLLMVFC 193
+ FL +V
Sbjct: 412 LTFLFLVAL 420
>gi|323222910|gb|EGA07260.1| hypothetical protein SEEM0047_13300 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
Length = 559
Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 83/246 (33%), Gaps = 31/246 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y + +
Sbjct: 104 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQW---FPAPNGN 155
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + ++ + + + FH I V ++AN+ A+P ++FV
Sbjct: 156 FPRGVRWLLNLLH---------LQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 206
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ + I
Sbjct: 207 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGW--VNIDNRWQCL 261
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF-----SPDLLISEKGNLVALVD 236
+ +L+++ + N R ++ + +++ + +L +G +A+V
Sbjct: 262 TFLPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVR 321
Query: 237 KNTLIS 242
+ +I
Sbjct: 322 GDKVIL 327
>gi|295096386|emb|CBK85476.1| DNA internalization-related competence protein ComEC/Rec2
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 698
Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/214 (10%), Positives = 65/214 (30%), Gaps = 27/214 (12%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ P+ T + P L + ++A+ ++Y + +
Sbjct: 244 QWSPWQVWLTCVAAILVFDPLAVLSQSL-----ALSAFAVAALIFWYQWLPLPH------ 292
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W++ ++ + + FH + L+AN+ A+P+++F+
Sbjct: 293 ---WQRGRCLRPLVT---LLYLQVGMLLLLLPLQVLIFHGFSLSSLVANLFAVPLVTFIS 346
Query: 127 IPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+P L+ + L + L++I + L + + + N + +
Sbjct: 347 VPLILLGMFLHLFPVAVLESIVWLATDKSLAGLFWL---LMRLPNGWQDVDERWQYLTLL 403
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
++ R + +
Sbjct: 404 P----WLLVIGWRFRAFSAAPAVCLAGSVVLAFP 433
>gi|254480654|ref|ZP_05093901.1| DNA internalization-related competence protein ComEC/Rec2 [marine
gamma proteobacterium HTCC2148]
gi|214039237|gb|EEB79897.1| DNA internalization-related competence protein ComEC/Rec2 [marine
gamma proteobacterium HTCC2148]
Length = 644
Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 89/303 (29%), Gaps = 30/303 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ + + T + L P G F + ++A+
Sbjct: 204 LRRQSNAPGSLMTAAFLLVLVNPLVMLSSG-----FWLSFSAVAALL------------- 245
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ ++S L Y + F AN L IP++
Sbjct: 246 --------WMGLWQKSGLKGRYLAPHLYMALVMFPVGALWFGGASWVSAPANFLMIPLVG 297
Query: 124 FVVIPAGLIAILLMILSLDNIP---FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
V+P L+ +L LD+ + + +D + +A +++ F S
Sbjct: 298 LCVVPLSLLGAFFSLLGLDSAASTLWKLAGLPIDWLWPLAEKLAGDQALFVATPASTLSI 357
Query: 181 VTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
++ L+V +R + +M+ + ++L +G V
Sbjct: 358 CLGLLAVGLIVLPFGRVLRVLCVVMLLPLFLARPQPSPEPQLNVLDVGQGTAVVFTVGER 417
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ + +++ P+ + D + + L + L I++
Sbjct: 418 ALLYDTGGGHPSGPNMSQSVVLPWLSHKGISALDTLMISHNDLDHSAGAADIMAALPIRQ 477
Query: 300 SFC 302
+
Sbjct: 478 VWR 480
>gi|300727111|ref|ZP_07060530.1| putative ComEC/Rec2 family protein [Prevotella bryantii B14]
gi|299775655|gb|EFI72246.1| putative ComEC/Rec2 family protein [Prevotella bryantii B14]
Length = 470
Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/185 (11%), Positives = 52/185 (28%), Gaps = 28/185 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+K + + + L P LFD F + I
Sbjct: 299 DRKGFSLNSLSFAAILMLLCNPQ-----SLFDVGFQMSCMAVMGIILLTP---------- 343
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+I + + + + +F YG+ ++L IP+ +
Sbjct: 344 ----------NIHNKVGS--ILLVSLSAQIATLPLTLYYFGQWSCYGIFLSLLVIPLSTI 391
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTI 183
++ + +LL + V+ ++I+ + ++ I + +
Sbjct: 392 ILYGMLGVYLLLPFTVFAQKLYIVVEEMVEILNKVVSFVASLPGAMINHVYISKFQVFLL 451
Query: 184 VVEFL 188
V L
Sbjct: 452 YVAIL 456
>gi|254508533|ref|ZP_05120651.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
parahaemolyticus 16]
gi|219548558|gb|EED25565.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
parahaemolyticus 16]
Length = 721
Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 86/247 (34%), Gaps = 35/247 (14%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P P L ++AI F SI S+ + +N +
Sbjct: 299 PQSALDPSL-----WLSMYAVAAILLFLSIR-----------------STYRHGVVNNVL 336
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
S + ++ F I + + N++ +P SFVV+PA IA ++ + +
Sbjct: 337 MQTFIVICMSLPVSVV--FGGISISAIGYNLVFVPWFSFVVMPATFIAAVVSLFGYVDAT 394
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE-FLLMVFCKTNIRHIGSIM 204
M +D + + S + + + IV+ F+ M+ T G ++
Sbjct: 395 IWGM---VDWALSVVVASSAWAGDSWFSLSSQEVTILIVLACFIFMLPWLTR---FGIVL 448
Query: 205 IGITIIILFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALIT 261
+T + L T + PD ++ L L + Y ++ S + LIT
Sbjct: 449 FALTFV-LVTVSWRPKPDWQLNILDVGHGLAILAVQGERALLYDTGAAWQQSNYAEQLIT 507
Query: 262 PFHEAPH 268
P EA
Sbjct: 508 PLMEAKG 514
>gi|315634139|ref|ZP_07889428.1| recombination protein 2 [Aggregatibacter segnis ATCC 33393]
gi|315477389|gb|EFU68132.1| recombination protein 2 [Aggregatibacter segnis ATCC 33393]
Length = 809
Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 62/183 (33%), Gaps = 14/183 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + + P +F ++ + +Y + T
Sbjct: 317 WQLLLRVVALLIFIDPLILLST-----SFWLSVGAVTCLIVWYQCFPLSLLHWRGKPLTH 371
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
++ F ++ + + F+ I + I N++A+P+ SF+++P
Sbjct: 372 THWRKVRYVFG---LFHLQLGLLWLFTPIQLFFFNGISLNSFITNLIAVPLYSFILVPLV 428
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
L A+L + + D+ I ++ + + IP + ++T+V+ L +
Sbjct: 429 LFAVLTQG---SWNTWWLAN---DLAEKITALLAPLQDHWLAISIPHSLWITLVLTCLFL 482
Query: 191 VFC 193
Sbjct: 483 GLL 485
>gi|225849490|ref|YP_002729655.1| DNA internalization-related competence protein ComEC/Rec2
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644109|gb|ACN99159.1| DNA internalization-related competence protein ComEC/Rec2
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 571
Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 56/209 (26%), Gaps = 32/209 (15%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
+ L P LF +F + + I I K
Sbjct: 290 AFVFLLISPD-----SLFSMSFQLSFMAVLGIIL--------------------GIEVFK 324
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI--L 135
+ + + + ++ +F+ G+IA PI S + P +++ +
Sbjct: 325 DYNNFVKLLGVSLFATLFTAPIVLYYFYNFSPTGIIA----TPIASLPLYPLLTLSVFNI 380
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
++D + M + I I + S + V L + K
Sbjct: 381 FTGFNVDFLV-KFMDFFGMIFIEVVKFFSSLGFYYTGFSPSLWVVGLYFVVILTVFLLKI 439
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ ++ LF P +
Sbjct: 440 RPVEKVLVSCFAFVVFLFLSKSDLRPKIY 468
>gi|238019267|ref|ZP_04599693.1| hypothetical protein VEIDISOL_01131 [Veillonella dispar ATCC 17748]
gi|237863966|gb|EEP65256.1| hypothetical protein VEIDISOL_01131 [Veillonella dispar ATCC 17748]
Length = 740
Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/207 (12%), Positives = 76/207 (36%), Gaps = 22/207 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ Y A + + P +FD +F + + +
Sbjct: 387 RLYQAKQALCICAILCLVYDPF-----SIFDVSFQLSFGATYGLLIW------------- 428
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++I + + + + + +FH I + L+A + P+L
Sbjct: 429 GKVLYERIQWLPKWIKTPLVLCVS--AQLLILPLQLYYFHYISIASLLAACIVAPLLDLS 486
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI-PETSFVTIV 184
++ + ++ +L + + + ++ L I +++ H + + + +G + P +++ +V
Sbjct: 487 IVLIFISTVISYVLPISFL-WSLIDVLLRISLYLNHVLGRSGSLLWLGMMNPYCAYLYLV 545
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIII 211
+ L F R+ I++ + ++
Sbjct: 546 LLGLFTYFLTHRKRYTVYIVLCLVFMV 572
>gi|224535875|ref|ZP_03676414.1| hypothetical protein BACCELL_00739 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522503|gb|EEF91608.1| hypothetical protein BACCELL_00739 [Bacteroides cellulosilyticus
DSM 14838]
Length = 645
Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 62/172 (36%), Gaps = 23/172 (13%)
Query: 1 MLSITK-KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L+I++ + + + T+ A L P + LFD F + + +I +
Sbjct: 271 LLAISRLQSEKLLSLNTLAATAFLMLLYNPLW--LFDVGFQLSFVAVVSILLIQP---KL 325
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
YS S + + + + + +I +F + L+ N+ I
Sbjct: 326 YSLLSVRRCIPRYVWGL---------LTVSVAAQIGTAPLVIFYFSRFSTHFLLTNLWVI 376
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII----HIAHRISVAH 167
P+++ ++ + ++ ++L A G+D ++ + I
Sbjct: 377 PMVTLILY-SAVLMLVLTPFPF---LQSGCALGVDALLSAQNKVLCWIEELP 424
>gi|262278135|ref|ZP_06055920.1| competence factor involved in DNA uptake [Acinetobacter
calcoaceticus RUH2202]
gi|262258486|gb|EEY77219.1| competence factor involved in DNA uptake [Acinetobacter
calcoaceticus RUH2202]
Length = 810
Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 70/213 (32%), Gaps = 15/213 (7%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+L + PF + L P G F Y + Y ++
Sbjct: 341 LLLVKLPVKPFSLLVYSASLLLLFDPFSVLSAG-----FWLSYGSCFILLRIYQ--TIVQ 393
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + +I + ++ + + ++ F I + NI+A+P
Sbjct: 394 TPNLASVSLLSRIILLSKTLIES-----QGKIFIALCPLMLIFFQQISWVAPLTNIIAVP 448
Query: 121 ILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+L +++P + A + ++ + N+ F + L I++ + +
Sbjct: 449 LLGGIIVPLNIFAACVWLIFNSIGNVFFQINDILLSIVLTCFSFLEKLSLPLQGFSLTPL 508
Query: 179 SFVTIVVEFLLMVFCKTNI-RHIGSIMIGITII 210
+ + + +++ + + + G I II
Sbjct: 509 ALLGLSCAIIILFLPRGVLPKSWGLICCLPLII 541
>gi|318606260|emb|CBY27758.1| putative hydrolase of the metallo-beta-lactamase superfamily,
clustered with KDO2-Lipid A biosynthesis genes [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 761
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 79/242 (32%), Gaps = 24/242 (9%)
Query: 38 NFSSYYKGISAIG-YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + ++ +FY +P + + +
Sbjct: 333 SFWLSCLAVFSLICWFYWVPFAPCFRTGWQGLVIRGLH-------------LQLGMMLLL 379
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDI 155
I FH I + + AN+ A+P++S + +P L+A++ +L L + + + L
Sbjct: 380 IPLQIVLFHGISLLSIPANLWAVPLVSLITVPCVLLALVFTLLPLVAGMFWSLADLSLTA 439
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFT 214
++ + ++ S +L M+ + + R+ ++ + + ++
Sbjct: 440 VL-----LPLSPMRIGWLYTGSASVAIGFGGWLAMLIWRFSWWRNYSIGVMVLCVNLVLF 494
Query: 215 FPYSFSPDLLI---SEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ L ++++ + + S S +I P+ +
Sbjct: 495 TQRRDEYQWRVDMLDIGHGLAVVIEREGKAIIFDTGNRWGTSSMASKVILPYLRWRGITI 554
Query: 272 ED 273
E
Sbjct: 555 EQ 556
>gi|325123110|gb|ADY82633.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter calcoaceticus PHEA-2]
Length = 810
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 67/213 (31%), Gaps = 15/213 (7%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
++ I PF + L P G F Y + Y +
Sbjct: 341 LVLIKVAVKPFSLLVYSASLLLLFDPFSVLSAG-----FWLSYGSCFILLRIYQTIEQAP 395
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ S + + + ++I + ++ F I NI+A+P
Sbjct: 396 NVVSTSLLS-------RIILFSKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIAVP 448
Query: 121 ILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+L V++P + A + ++ N+ F + + I++ + + +
Sbjct: 449 LLGGVIVPLNIFAACVWLIFKSFGNLLFQINDVLISIVLSCFNLLEKLSLPLQGFSLTPL 508
Query: 179 SFVTIVVEFLLMVFCKTNI-RHIGSIMIGITII 210
V + +++ + + + G I II
Sbjct: 509 DLVCLSFVIIILFLPRGVLPKSWGLICCLPLII 541
>gi|29349355|ref|NP_812858.1| competence protein [Bacteroides thetaiotaomicron VPI-5482]
gi|29341263|gb|AAO79052.1| competence protein [Bacteroides thetaiotaomicron VPI-5482]
Length = 700
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 48/140 (34%), Gaps = 20/140 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I + +S I + + ++
Sbjct: 358 LFDVGFQLSFLAVLSILMIQKPVYQLLPVKS----------RIGKYVWGLM--SVSIAAQ 405
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F + L+ N++ IP+++ + A ++ +LL L VMA +
Sbjct: 406 IGTAPLVMLYFSRFSTHFLLTNLVVIPLVTVTLY-AAVLMLLLTPLPA---VQFVMAGAV 461
Query: 154 DIIIHI----AHRISVAHNE 169
++ + +
Sbjct: 462 RFLLKVLNDFVRWVEQLPYA 481
>gi|262373139|ref|ZP_06066418.1| competence factor [Acinetobacter junii SH205]
gi|262313164|gb|EEY94249.1| competence factor [Acinetobacter junii SH205]
Length = 804
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 65/206 (31%), Gaps = 18/206 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
PF + + P F Y + Y + +
Sbjct: 344 PFQLLIYSACLFLIYDPFSILS-----AAFWLSYGACFILLRIYQTIRTLPKDR-----I 393
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ IK + I + + + +I F I ++N++AIPILS +V+P
Sbjct: 394 KNRTEDIKFAIKILIESQWKIF--IALMPLVIIFFQQIAWIAPLSNLIAIPILSMLVVPL 451
Query: 130 GLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
+ A + ++ L + F + L I+I + + + S + +
Sbjct: 452 DIFAACVWLIFPSLGLVLFTLNNMLLSILIGLLDVLMSLTPDLQGISYIPLSLFALSIGI 511
Query: 188 LLMVFCKT----NIRHIGSIMIGITI 209
L++ K + + + I
Sbjct: 512 LILFMPKGTIPKSWGLVCFLPILFGA 537
>gi|90415820|ref|ZP_01223753.1| DNA internalization-related competence protein [marine gamma
proteobacterium HTCC2207]
gi|90332194|gb|EAS47391.1| DNA internalization-related competence protein [marine gamma
proteobacterium HTCC2207]
Length = 614
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 85/253 (33%), Gaps = 33/253 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PF + L P G F + ++ + ++S + +
Sbjct: 265 RRIQPFVCLVWALTLIALLQPLAVLSAG-----FWLSFTAVAILIAWFSPWQSTDPWWAK 319
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++ + ++ L+ + + N++A+P +S V
Sbjct: 320 KRTVTAQLALL-----------------LVMAVPLLLFMGRLSWLAPLVNLVAVPWVSLV 362
Query: 126 VIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+P L+ LL+ +S + V W + ++ + + + P + I
Sbjct: 363 TVPTVLLGCLLLPISTNTAETIWKVSDWSVQLLW---QFLDLLPSNQGFLVSPAGTSSLI 419
Query: 184 VV-----EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
++ M+ K R +G + + + +++ + +L +G V +V+ +
Sbjct: 420 LLTGLLAGLCFMLPWKFYERWLGILPLVLLLVLSEKPKFGLRVTVLDVGQGLAV-VVETD 478
Query: 239 TLISNYSNPPSFI 251
Y + F
Sbjct: 479 QRSLLYDSGAQFS 491
>gi|116872911|ref|YP_849692.1| comEC/Rec2 family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741789|emb|CAK20913.1| comEC/Rec2 family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 719
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 94/265 (35%), Gaps = 23/265 (8%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSS-YYKGISAIGYFYSIPKMIYSSESHNT 67
P A L + FS+ +S I +F P +IY +
Sbjct: 244 ANPPVIRAATMTALLLLSEK------YSTKFSAFSVICLSFILFFILQPYVIYEVGFQLS 297
Query: 68 WTWK-------KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + KQ I + +S+ ++ HF+ G+ N+L +P
Sbjct: 298 YAVSFGIILSSRQILTKQQNPFAKSFAISLISTMMSSVVMMYHFYSFSWAGIFFNLLYVP 357
Query: 121 ILSFVVIPAGLIAI---LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
I + +++P+ + L+ L+ ++ + + ++ I + + + + P
Sbjct: 358 IFTVIILPSCFVVFFISLIFPAFLNMPESLLI-FIIQLMEKITNIFAQIPYQTIVTGRPN 416
Query: 178 TSFVTIVVEFLLMVF--CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
T + +++ +L++F + N +G + + + +F +S + +G+ + +
Sbjct: 417 TLILILMILTILLLFYRWQKNKFPLGLLFCFCALCYIASFNFSGKVSFIDIGQGDSILIQ 476
Query: 236 DKN---TLISNYSNPPSFIFSQWKS 257
N + + F W
Sbjct: 477 LPNNAGNYLIDTGGQLPFEKENWAK 501
>gi|329737151|gb|EGG73405.1| DNA internalization competence protein ComEC/Rec2-like protein
[Staphylococcus epidermidis VCU028]
Length = 738
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 12/145 (8%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ + P I L P + +F I + P+ I
Sbjct: 245 IYAVYTGFVPSAMRAISIAIIILMLPIHFRKSSIHVLSF------IFVLMILL-NPQFIN 297
Query: 61 SSESHNTWTWKKISSIKQSFLNEI-----RANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
++ + + +++ + I + + HF+ GL++N
Sbjct: 298 HIGFQFSFLISLFIILAKPYISALKPLKCLFIISFLAQLGSIVINTYHFNQFQWIGLLSN 357
Query: 116 ILAIPILSFVVIPAGLIAILLMILS 140
+ +P SF++ P+ +I +L+
Sbjct: 358 FIFVPFYSFILFPSVIIYFILIHFF 382
>gi|329725458|gb|EGG61941.1| putative DNA internalization competence protein ComEC/Rec2-like
protein [Staphylococcus epidermidis VCU144]
gi|329735398|gb|EGG71690.1| putative DNA internalization competence protein ComEC/Rec2-like
protein [Staphylococcus epidermidis VCU045]
Length = 602
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 12/145 (8%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ + P I L P + +F I + P+ I
Sbjct: 109 IYAVYTGFVPSAMRAISIAIIILMLPIHFRKSSIHVLSF------IFVLMILL-NPQFIN 161
Query: 61 SSESHNTWTWKKISSIKQSFLNEI-----RANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
++ + + +++ + I + + HF+ GL++N
Sbjct: 162 HIGFQFSFLISLFIILAKPYISALKPLKCLFIISFLAQLGSIVINTYHFNQFQWIGLLSN 221
Query: 116 ILAIPILSFVVIPAGLIAILLMILS 140
+ +P SF++ P+ +I +L+
Sbjct: 222 FIFVPFYSFILFPSVIIYFILIHFF 246
>gi|293366452|ref|ZP_06613129.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319221|gb|EFE59590.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 738
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 12/145 (8%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ + P I L P + +F I + P+ I
Sbjct: 245 IYAVYTGFVPSAMRAISIAIIILMLPIHFRKSSIHVLSF------IFVLMILL-NPQFIN 297
Query: 61 SSESHNTWTWKKISSIKQSFLNEI-----RANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
++ + + +++ + I + + HF+ GL++N
Sbjct: 298 HIGFQFSFLISLFIILAKPYISALKPLKCLFIISFLAQLGSIVINTYHFNQFQWIGLLSN 357
Query: 116 ILAIPILSFVVIPAGLIAILLMILS 140
+ +P SF++ P+ +I +L+
Sbjct: 358 FIFVPFYSFILFPSVIIYFILIHFF 382
>gi|251811004|ref|ZP_04825477.1| competence protein ComEC [Staphylococcus epidermidis BCM-HMP0060]
gi|282875984|ref|ZP_06284851.1| ComEC/Rec2-like protein [Staphylococcus epidermidis SK135]
gi|251805514|gb|EES58171.1| competence protein ComEC [Staphylococcus epidermidis BCM-HMP0060]
gi|281295009|gb|EFA87536.1| ComEC/Rec2-like protein [Staphylococcus epidermidis SK135]
Length = 738
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 12/145 (8%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ + P I L P + +F I + P+ I
Sbjct: 245 IYAVYTGFVPSAMRAISIAIIILMLPIHFRKSSIHVLSF------IFVLMILL-NPQFIN 297
Query: 61 SSESHNTWTWKKISSIKQSFLNEI-----RANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
++ + + +++ + I + + HF+ GL++N
Sbjct: 298 HIGFQFSFLISLFIILAKPYISALKPLKCLFIISFLAQLGSIVINTYHFNQFQWIGLLSN 357
Query: 116 ILAIPILSFVVIPAGLIAILLMILS 140
+ +P SF++ P+ +I +L+
Sbjct: 358 FIFVPFYSFILFPSVIIYFILIHFF 382
>gi|57867050|ref|YP_188731.1| competence protein ComEC/Rec2 [Staphylococcus epidermidis RP62A]
gi|57637708|gb|AAW54496.1| competence protein ComEC/Rec2, putative [Staphylococcus epidermidis
RP62A]
Length = 738
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 12/145 (8%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ + P I L P + +F I + P+ I
Sbjct: 245 IYAVYTGFVPSAMRAISIAIIILMLPIHFRKSSIHVLSF------IFVLMILL-NPQFIN 297
Query: 61 SSESHNTWTWKKISSIKQSFLNEI-----RANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
++ + + +++ + I + + HF+ GL++N
Sbjct: 298 HIGFQFSFLISLFIILAKPYISALKPLKCLFIISFLAQLGSIVINTYHFNQFQWIGLLSN 357
Query: 116 ILAIPILSFVVIPAGLIAILLMILS 140
+ +P SF++ P+ +I +L+
Sbjct: 358 FIFVPFYSFILFPSVIIYFILIHFF 382
>gi|27468192|ref|NP_764829.1| ComEC late competence protein 3 [Staphylococcus epidermidis ATCC
12228]
gi|27315738|gb|AAO04873.1|AE016748_107 ComEC late competence protein 3 [Staphylococcus epidermidis ATCC
12228]
Length = 738
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 12/145 (8%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ + P I L P + +F I + P+ I
Sbjct: 245 IYAVYTGFVPSAMRAISIAIIILMLPIHFRKSSIHVLSF------IFVLMILL-NPQFIN 297
Query: 61 SSESHNTWTWKKISSIKQSFLNEI-----RANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
++ + + +++ + I + + HF+ GL++N
Sbjct: 298 HIGFQFSFLISLFIILAKPYISALKPLKCLFIISFLAQLGSIVINTYHFNQFQWIGLLSN 357
Query: 116 ILAIPILSFVVIPAGLIAILLMILS 140
+ +P SF++ P+ +I +L+
Sbjct: 358 FIFVPFYSFILFPSVIIYFILIHFF 382
>gi|204930093|ref|ZP_03221114.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204321087|gb|EDZ06288.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 704
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 72/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 269 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 322
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 323 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 371
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 372 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTF 428
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
L+ + G+ ++ + + +L +G +A+V +
Sbjct: 429 WPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 488
Query: 239 TLIS 242
+I
Sbjct: 489 KVIL 492
>gi|182680912|ref|YP_001829072.1| DNA internalization-related competence protein ComEC/Rec2 [Xylella
fastidiosa M23]
gi|182631022|gb|ACB91798.1| DNA internalization-related competence protein ComEC/Rec2 [Xylella
fastidiosa M23]
Length = 822
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 46/161 (28%), Gaps = 24/161 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + +
Sbjct: 379 GFWLSFAGVA---------------------WLMWCMQDGHAASCRGFLSAQGVATLGLL 417
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
F + F + G +AN++AIP+ +FVV+P L+ L L + + +
Sbjct: 418 PFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLGTALEALVPGWGSPMWRLGGNFFQW 477
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ ++ + + + ++ ++ +
Sbjct: 478 SWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWLLLPRG 518
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 26/198 (13%), Positives = 59/198 (29%), Gaps = 12/198 (6%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP--KMIYSSESHN 66
A + + RL P PG FD + +GI A GY + + ++ N
Sbjct: 169 SALHAGSVWQLHVRLRAPHSLMNPGGFDSERYALAQGIVATGYVRMPTMARELAAATGIN 228
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W + + I + L E + + + + GL +++AI +
Sbjct: 229 AWRERMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHVGM 287
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ ++ ++ IA + + S T+
Sbjct: 288 VAGACALLVSLLWRDLAW---------RWPRPIAMALIAVPAAAGYTVLAGASLPTVRTA 338
Query: 187 FLLMVFCKTNIRHIGSIM 204
++ + + ++
Sbjct: 339 LMIGIVALARLTRRRAMP 356
>gi|291085625|ref|ZP_06353537.2| DNA internalization-related competence protein ComEC/Rec2
[Citrobacter youngae ATCC 29220]
gi|291070461|gb|EFE08570.1| DNA internalization-related competence protein ComEC/Rec2
[Citrobacter youngae ATCC 29220]
Length = 708
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 89/280 (31%), Gaps = 33/280 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++A+ ++Y + +
Sbjct: 253 RQWSGWSVWICCLAAIVVVDPVAILSQSL-----WLSAFAVAALIFWYQWIPLPDWPRA- 306
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + ++ + I FH I + +AN+ A+P+++F+
Sbjct: 307 -----------RSGRMLLALTHLQLGITVLLLPVQISMFHGISLTSFVANLFAVPLVTFI 355
Query: 126 VIPAGLIAILLMILSLDNI---PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L +L+ + LD + + + L ++ ++ + ++
Sbjct: 356 SVPLILAGMLVHLTGLDVLESGLWYLADRSLAVLFW---GLNALPQGWINIDA-RWQWLA 411
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL----ISEKGNLVALVDKN 238
+ LL+ + R I ++ I + +I+ + D + L ++ +N
Sbjct: 412 FLPGLLLVAYRLNVWRTIPAVCIAVFLILSAPLWRAPRTDAWQVHMLDVGQGLAMVIARN 471
Query: 239 TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKN 278
Y W P ++ +L+ +
Sbjct: 472 GKAILYDTG-----LAWPEGDSAQQLIIPWLRWHNLEPEG 506
>gi|28871001|ref|NP_793620.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato str. DC3000]
gi|28854250|gb|AAO57315.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 738
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 25/176 (14%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S +W S ++
Sbjct: 314 VLIVEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGSWSWWQSWTRAQ 358
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P LI LL+ +
Sbjct: 359 WLIAIGLLPILLALNLP---------ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPVP 409
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + L + ++ A + +P +++ ++ +++ K
Sbjct: 410 VVGEGLLWLAGGALQWLFVFLGWVAEALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 465
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 79/253 (31%), Gaps = 16/253 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ +L P G P FD+ + I A G ++ + + ++
Sbjct: 123 SGERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQR 182
Query: 73 ISSI--KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ ++ + +G S+ + + ++L I ++
Sbjct: 183 LLAVDAQGREGGLAALVLGDGSGLSSGDW------QVLQDTGTVHLLVISGQHIGLLAGV 236
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ A++ L A I+ G ++V +L
Sbjct: 237 IYALVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVL- 292
Query: 191 VFCKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+ RH+G + +I +++ + P +S + ++ + + ++S
Sbjct: 293 -LWRLRFRHLGVVWPFLISFNAVLIVEPLVTLQPGFWLSFAAVGILVLIFSGRLGSWSWW 351
Query: 248 PSFIFSQWKSALI 260
S+ +QW A+
Sbjct: 352 QSWTRAQWLIAIG 364
>gi|238926940|ref|ZP_04658700.1| competence protein EC [Selenomonas flueggei ATCC 43531]
gi|238885174|gb|EEQ48812.1| competence protein EC [Selenomonas flueggei ATCC 43531]
Length = 811
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/231 (11%), Positives = 72/231 (31%), Gaps = 31/231 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF +F + + + + + ++ + + +I
Sbjct: 360 LFHISFQLSFLATAGLLFLAPV----------LAAKMHRLPRLV-----SMAFSITIAAQ 404
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWG 152
L +F+ + + L+AN++ +PI+ ++I I+ +L L I F +
Sbjct: 405 LMVLPVLAWYFNQVSISALLANLVVVPIVELIIIMGLFAGIVAYLLPLFGGILFAADSVL 464
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCK----------TNIRHIG 201
L I + ++ + I V L++ R I
Sbjct: 465 LGISFELTRALAAFPLSKVWLPSIGIVPSVCYYAVILMLCAPTEMRRKILSRFLAYRRIA 524
Query: 202 SIMIGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKNTLISNYSNPP 248
+++ ++ + + ++ + +G+ +V + +
Sbjct: 525 AVLCLALLVGVCAWRMVMPREMAVHFIDVGQGDCALVVTPHGHAMLFDTGG 575
Score = 37.1 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 63/181 (34%), Gaps = 8/181 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW--TW 70
I ++ P G PG D +GI+A I S + + W
Sbjct: 157 IGDRITAEGKIRRPHGYQNPGQIDTALLLRTQGITASLSARRGSVSIESRDDISLWEQWM 216
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
++ + I+ +L +RA + +A+ L + I L+ I+ + +
Sbjct: 217 RRAAEIRTHYLERMRAVMPRTDAAAIFAMLFGGYEGIDP-ALLEAYTTTGIVHILSVSGS 275
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA-----HNEFCIGRIPETSFVTIVV 185
I+++ +++ + + W ++ A V G + +F+ +V+
Sbjct: 276 HISLIAAVIAWIAVILRLPRWFGAAVVISAIFFYVLLAGMVPPAVRSGMMGGAAFLGLVL 335
Query: 186 E 186
Sbjct: 336 G 336
>gi|206891046|ref|YP_002247923.1| DNA internalization-related competence protein ComEC/Rec2
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742984|gb|ACI22041.1| DNA internalization-related competence protein ComEC/Rec2
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 749
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 82/282 (29%), Gaps = 35/282 (12%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+ + PS D +F + AIG+ I K + + ++ +S
Sbjct: 291 SLACLFILVIDPSSTK-----DLSFQLSFLATVAIGFATDIYKNFKNKIQNKVLSYLLLS 345
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + I + +I FH + + +AN+ A ++ + P +I +
Sbjct: 346 LLISFSASLI-----------TAPIVIYKFHYLSLISPVANLTAGFVIGMFLFPLNVIFV 394
Query: 135 LLMIL----SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ ++ L I + + ++ +A + I IP S + L
Sbjct: 395 FIYLITGIYPLPEIVNTIANFSFKLMHLLASFSFSS---LSIPPIPLGSVILFYFGIFLS 451
Query: 191 VF----CKTNIRHIGSIMIGITIIILFTFPYS--------FSPDLLISEKGNLVALVDKN 238
+F K + + ++ + I L + +
Sbjct: 452 IFACYGLKGWFKKLSFMVSCLLIFSSVLTSLVLDNLQRNFIKITFLDVGQAESAVVETPE 511
Query: 239 TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQS 280
+ + F Q+ A +A + E
Sbjct: 512 AVFLVDTGKTGFEAVQYLKAKGYRQLQALIITHEQKDHAGGF 553
>gi|300937742|ref|ZP_07152543.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 21-1]
gi|300457249|gb|EFK20742.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 21-1]
Length = 427
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 65/186 (34%), Gaps = 21/186 (11%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
++A+ ++Y W+ ++ ++ +
Sbjct: 2 LSAAAVAALIFWYQWFPGP---------EWQLPPVLRAVVS---LIHLQLGITLLLMPVQ 49
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGLDIII 157
I FH I + IAN+ AIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 50 IVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPLILEEGLWFLADRSLALLF 109
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFP 216
+ + + L+V + N R + ++ + +++ +
Sbjct: 110 W---GLKSLPEGWINIAERWQWLSFSP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLW 164
Query: 217 YSFSPD 222
PD
Sbjct: 165 QKPRPD 170
>gi|307579380|gb|ADN63349.1| DNA internalization-related competence protein ComEC/Rec2 [Xylella
fastidiosa subsp. fastidiosa GB514]
Length = 836
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 46/161 (28%), Gaps = 24/161 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + +
Sbjct: 393 GFWLSFAGVA---------------------WLMWCMQDGHAASCRGFLSAQGVATLGLL 431
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
F + F + G +AN++AIP+ +FVV+P L+ L L + + +
Sbjct: 432 PFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLGTALEALVPGWGSPMWRLGGNFFQW 491
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ ++ + + + ++ ++ +
Sbjct: 492 SWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWLLLPRG 532
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP--KMIYSSESHN 66
A + + RL P PG FD + +GI A GY + + ++ N
Sbjct: 180 SALHAGSVWQLHVRLRAPHSLMNPGGFDSERYALAQGIVATGYVRMPTMARELAAATGIN 239
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W + + I + L E + + + + GL +++AI
Sbjct: 240 AWRERMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHV-- 296
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ +++SL F +AW IA + + S T+
Sbjct: 297 --GMVAGACALLVSLLWRVFPHLAW--RWPRPIAMALIAVPAAAGYTVLAGASLPTVRTA 352
Query: 187 FLLMVFCKTNIRHIGSIM 204
++ + + ++
Sbjct: 353 LMIGIVALARLTRRRAMP 370
>gi|229117822|ref|ZP_04247186.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock1-3]
gi|228665619|gb|EEL21097.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock1-3]
Length = 715
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 97/293 (33%), Gaps = 57/293 (19%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ I P +I G+ RLS + + F+ F
Sbjct: 212 VYMIIAGASPSVIRASITGVLLLVAFICSVRLSSLDALSITAICMLIYDPYLVFNIGFQF 271
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ S I+ + I + + ++ L+
Sbjct: 272 SF--VGSFALILSAPILLRHSNGI----------IRNAIYISIISQL------VSTPILL 313
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIH 158
HF Y + N++ +P LS +V+P L+ I ++ + +++ GL I +
Sbjct: 314 YHFGYFSPYSIFLNLIYVPFLSILVLPCSIIILVFIPIIPFLAKGLAN-ILSVGLIISNN 372
Query: 159 IAHRISVAHNEFCIGRIPETSFVTI-----VVEFLLMVFCKT-NIRHIGSIMIGITII-- 210
+ F +TS + I ++ +L+V + + + +M G I
Sbjct: 373 LLSYCESLP--FPRLVFGQTSILLIVVYCVMIVSILIVLERGLPKKIVFIVMSGFLFIST 430
Query: 211 --ILFTFPYSFSPDLLIS-EKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
++ + I +G+ + + DK + + +W+
Sbjct: 431 CHYVYPYFRESGSVTFIDVGQGDAILIRLPYDKGVYLIDTGGTLRINKEEWQR 483
>gi|229098796|ref|ZP_04229734.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-29]
gi|228684640|gb|EEL38580.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-29]
Length = 715
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 97/293 (33%), Gaps = 57/293 (19%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ I P +I G+ RLS + + F+ F
Sbjct: 212 VYMIIAGASPSVIRASITGVLLLVAFICSVRLSSLDALSITAICMLIYDPYLVFNIGFQF 271
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ S I+ + I + + ++ L+
Sbjct: 272 SF--VGSFALILSAPILLRHSNGI----------IRNAIYISIISQL------VSTPILL 313
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIH 158
HF Y + N++ +P LS +V+P L+ I ++ + +++ GL I +
Sbjct: 314 YHFGYFSPYSIFLNLIYVPFLSILVLPCSIIILVFIPIIPFLAKGLAN-ILSVGLIISNN 372
Query: 159 IAHRISVAHNEFCIGRIPETSFVTI-----VVEFLLMVFCKT-NIRHIGSIMIGITII-- 210
+ F +TS + I ++ +L+V + + + +M G I
Sbjct: 373 LLSYCESLP--FPRLVFGQTSILLIVVYCVMIVSILIVLERGLPKKIVFIVMSGFLFIST 430
Query: 211 --ILFTFPYSFSPDLLIS-EKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
++ + I +G+ + + DK + + +W+
Sbjct: 431 CHYVYPYFRESGSVTFIDVGQGDAILIRLPYDKGVYLIDTGGTLRINKEEWQR 483
>gi|313894554|ref|ZP_07828118.1| ComEC/Rec2-like protein [Veillonella sp. oral taxon 158 str. F0412]
gi|313440950|gb|EFR59378.1| ComEC/Rec2-like protein [Veillonella sp. oral taxon 158 str. F0412]
Length = 744
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 71/181 (39%), Gaps = 17/181 (9%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD +F + + + +++I + + + +
Sbjct: 413 SLFDVSFQLSFGATYGLLIW-------------GKVLYERIQWLPRWIKTPLVLCVS--A 457
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ +FH I + L+A + P+L ++ + ++ +L + + + ++
Sbjct: 458 QLLIMPLQLYYFHYISIASLLAACIVAPLLDISIVLIFVSTLVSYVLPIS-LMWSLVDVL 516
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPET-SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
L I +++ H + + + +G I +++ V+ L F R+ I+I ++++I
Sbjct: 517 LRISLYLNHVLGRSGSLLWLGMIHPYCAYIYYVLLGLFTYFLTHRKRYTVHIVISLSLLI 576
Query: 212 L 212
L
Sbjct: 577 L 577
>gi|251792693|ref|YP_003007419.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter aphrophilus NJ8700]
gi|247534086|gb|ACS97332.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter aphrophilus NJ8700]
Length = 755
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 48/127 (37%), Gaps = 8/127 (6%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P+ + + L P +F ++++ +Y + ++
Sbjct: 260 WTPWRLLWRVLALLILIDPLMLLST-----SFWLSVSAVTSLMIWYQFFPLSLLQWRQSS 314
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
T ++ F ++ + + F+ + + IAN++A+PI SF+++
Sbjct: 315 LTHSPWHKVRWIFS---LFHLQLGLLWLFTPIQLFFFNGLSLNSFIANLIAVPIYSFLLV 371
Query: 128 PAGLIAI 134
P L A+
Sbjct: 372 PLVLFAV 378
>gi|255659304|ref|ZP_05404713.1| DNA internalization-related competence protein ComEC/Rec2
[Mitsuokella multacida DSM 20544]
gi|260848767|gb|EEX68774.1| DNA internalization-related competence protein ComEC/Rec2
[Mitsuokella multacida DSM 20544]
Length = 803
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/233 (10%), Positives = 66/233 (28%), Gaps = 35/233 (15%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
F +F Y + + + + + W + + + + +
Sbjct: 357 FHISFELSYLATAGLIFLAPVFR-----------AWLRARGLPDAIAMSLAITLS--AQL 403
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ L +F + + L+AN L +PIL ++I +L +L VM
Sbjct: 404 ATLPVLAWYFGQVSLSALLANFLVVPILELIIIFGLFAGLLAFLLPFFGHVIFVM---TS 460
Query: 155 IIIHIA----HRISVAHNEFCIGRIPETSFVT---IVVEFLL------------MVFCKT 195
+++ +A H ++ + + LL + +
Sbjct: 461 LMLGLAAELVHMLARLPGGIVYLAAMAWPTAVLYYLALGTLLLGEEQREWLRARLTPWRR 520
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP 248
+ ++ + P + + +G+ +V +
Sbjct: 521 PAFALFLVLAASIPLYRAVTPDRLAVHFIDVGQGDAALVVTPAGRALLFDTGG 573
>gi|315303227|ref|ZP_07873877.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
ivanovii FSL F6-596]
gi|313628409|gb|EFR96892.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
ivanovii FSL F6-596]
Length = 566
Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR-------ANIGT 90
S + I S I +F+ P +IY ++ + + I
Sbjct: 115 WSSFSIICISFILFFFIQPYVIYEVGFQLSYAVSFGIILSSQGILMKLQHPLSRSLAISF 174
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGV 148
+ +ASI ++ HF+ G+ N+L IPI + +++P + +LL S + IP +
Sbjct: 175 VSTITASIVMMYHFYSFSWVGIFFNLLYIPIFTIIILPGCFLVLLLSFTSSTVLTIPEII 234
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ + + +I ++ + + + + P
Sbjct: 235 LTFFIQVIENLTNLFAKIPYQTIVTGRP 262
>gi|17545839|ref|NP_519241.1| transporter DNA uptake transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|17428133|emb|CAD14822.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 847
Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 61/222 (27%), Gaps = 16/222 (7%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ L P G + ++ I I + + +
Sbjct: 367 AAALVALVDPWAVMSAGG-----WLSFGAVAVIFLAARIVAADARDDVR-----RPAWPV 416
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ A + + + F + V +AN LAIP++SFV P L+ L
Sbjct: 417 RAWRGLRGAARVQLAVTFGLLPLTLLLFQQVSVVSAVANALAIPVVSFVTTPLALMGTAL 476
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
++ +++ + + V + ++
Sbjct: 477 -PEPWSQPVLIWAEASFAWLMPWLDALALPGGSVWVAPAAPAWAWGLAVVGVPLLLVPGG 535
Query: 197 -----IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
R G++++ ++ P ++ + G A
Sbjct: 536 YRAWAWRAQGAVLLLPMLLARAPAPPPGEFRMVAFDIGQGAA 577
>gi|301382841|ref|ZP_07231259.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato Max13]
gi|302062853|ref|ZP_07254394.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato K40]
gi|302131670|ref|ZP_07257660.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 734
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 25/176 (14%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S TW S ++
Sbjct: 310 VLIVEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGTWSWWQSWTRAQ 354
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P LI LL+ +
Sbjct: 355 WLIALGLLPILLALNLP---------ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPVP 405
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + L + ++ A + +P +++ ++ +++ K
Sbjct: 406 VVGEGLLWLAGGALQWLFVFLGWVAEALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 461
Score = 36.7 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 75/248 (30%), Gaps = 16/248 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ +L P G P FD+ + I A G ++ + + ++
Sbjct: 119 SGERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQR 178
Query: 73 ISSI--KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ ++ + +G S+ + + ++L I ++
Sbjct: 179 LLAVDAQGREGGLAALVLGDGSGLSSGDW------QVLQDTGTVHLLVISGQHIGLLAGV 232
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ A++ L A I+ G ++V +L
Sbjct: 233 IYALVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVL- 288
Query: 191 VFCKTNIRHIGSIMIGIT---IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+ RH+G + + +++ + P +S + ++ + + +S
Sbjct: 289 -LWRLRFRHLGVVWPFLLSFNAVLIVEPLVTLQPGFWLSFAAVGILVLIFSGRLGTWSWW 347
Query: 248 PSFIFSQW 255
S+ +QW
Sbjct: 348 QSWTRAQW 355
>gi|213969765|ref|ZP_03397900.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato T1]
gi|213925573|gb|EEB59133.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato T1]
Length = 738
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 25/176 (14%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S TW S ++
Sbjct: 314 VLIVEPLVTLQPG-----FWLSFAAVGILVLIF----------SGRLGTWSWWQSWTRAQ 358
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P LI LL+ +
Sbjct: 359 WLIALGLLPILLALNLP---------ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPVP 409
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + L + ++ A + +P +++ ++ +++ K
Sbjct: 410 VVGEGLLWLAGGALQWLFVFLGWVAEALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 465
Score = 36.7 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 75/248 (30%), Gaps = 16/248 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ +L P G P FD+ + I A G ++ + + ++
Sbjct: 123 SGERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQR 182
Query: 73 ISSI--KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ ++ + +G S+ + + ++L I ++
Sbjct: 183 LLAVDAQGREGGLAALVLGDGSGLSSGDW------QVLQDTGTVHLLVISGQHIGLLAGV 236
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ A++ L A I+ G ++V +L
Sbjct: 237 IYALVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVL- 292
Query: 191 VFCKTNIRHIGSIMIGIT---IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+ RH+G + + +++ + P +S + ++ + + +S
Sbjct: 293 -LWRLRFRHLGVVWPFLLSFNAVLIVEPLVTLQPGFWLSFAAVGILVLIFSGRLGTWSWW 351
Query: 248 PSFIFSQW 255
S+ +QW
Sbjct: 352 QSWTRAQW 359
>gi|301309166|ref|ZP_07215110.1| ComEC/Rec2-related protein [Bacteroides sp. 20_3]
gi|300832848|gb|EFK63474.1| ComEC/Rec2-related protein [Bacteroides sp. 20_3]
Length = 428
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 46/168 (27%), Gaps = 19/168 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKM-IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD F Y + I + K I W+ I +
Sbjct: 248 LFDIGFQLSYLAVFFILFLVPRFKEWIVVRNPLLAMPWEWI-------------TVSIAA 294
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL--IAILLMILSLDNIPFGVMA 150
++ +F L N+ + +L+ +IP + + D I V
Sbjct: 295 QIGTALLCFYYFGQFSTVFLFTNL-PVTLLAMFLIPFAFFWLGYPVDFCGYDWIQKIVEG 353
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ ++ + S GR FL++ IR
Sbjct: 354 L-VHGMVRVVDVFSALPYATITGRFSFFEM-LGGYGFLVLCLIYMKIR 399
>gi|119511870|ref|ZP_01630970.1| competence protein [Nodularia spumigena CCY9414]
gi|119463512|gb|EAW44449.1| competence protein [Nodularia spumigena CCY9414]
Length = 785
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/256 (11%), Positives = 81/256 (31%), Gaps = 24/256 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + K++ + + + I + +
Sbjct: 373 IWDLGFELSFLATLGLIV-------------TVPALVKRLDWLPLAIASLI--AVPLAAT 417
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG-VMAWG 152
+ F +P YG++ NI++ P+++ + I + AI ++ V+ +
Sbjct: 418 IWTLPVQLYVFGVMPAYGVLLNIISTPLIATISIGGIISAIAALVWPAGGSALAGVLYFP 477
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVF---CKTNIRHIGSIMIGIT 208
D +I + S +G I + I +L+ + G ++I +
Sbjct: 478 TDWLIKLVEVFSNLPGNYLRVGSISTWQLLGIYALIILVWLVRWWQKRWWFAGLMVISLV 537
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP----SFIFSQWKSALITPFH 264
+I + + + +++ V ++ ++ ++ F +
Sbjct: 538 LIPSWYYTNTLFRITVLAAGTEPVVVIQDRGKVTLINSGDQGTGRFTILPFLQQQGVNQI 597
Query: 265 EAPHVQKEDLQEKNQS 280
+ Q+ N
Sbjct: 598 DWAIASNFKYQDSNAW 613
>gi|229104956|ref|ZP_04235612.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-28]
gi|228678450|gb|EEL32671.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-28]
Length = 715
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 97/293 (33%), Gaps = 57/293 (19%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ I P +I G+ RLS + + F+ F
Sbjct: 212 VYMIIAGASPSVIRASITGVLLLVAFICSVRLSSLDALSITAICMLIYDPYLVFNIGFQF 271
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ S I+ + I + + ++ L+
Sbjct: 272 SF--VGSFALILSAPILLRHSNG----------VIRNAIYISIISQL------VSTPILL 313
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAG---LIAILLMILSLDNIPFGVMAWGLDIIIH 158
HF Y + N++ +P LS +V+P L+ I ++ + +++ GL I +
Sbjct: 314 YHFGYFSPYSIFLNLIYVPFLSILVLPCSIIILVFIPIIPFLAKGLAN-ILSVGLIISNN 372
Query: 159 IAHRISVAHNEFCIGRIPETSFVTI-----VVEFLLMVFCKT-NIRHIGSIMIGITII-- 210
+ F +TS + I ++ +L+V + + + +M G I
Sbjct: 373 LLSYCESLP--FPRLVFGQTSILLIVVYCVMIVSILIVLERGLPKKIVFIVMSGFLFIST 430
Query: 211 --ILFTFPYSFSPDLLIS-EKGNLVALV---DKNTLISNYSNPPSFIFSQWKS 257
++ + I +G+ + + DK + + +W+
Sbjct: 431 CHYVYPYFRESGSVTFIDVGQGDAILIRLPYDKGVYLIDTGGTLRINKEEWQR 483
>gi|307254585|ref|ZP_07536418.1| hypothetical protein appser9_8300 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306862473|gb|EFM94434.1| hypothetical protein appser9_8300 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
Length = 585
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 17/235 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ Y P+ + + L P +F + ++ +Y S
Sbjct: 259 FLRYHYTPWQYWWRVVTVLLLFDPITVLS-----DSFWLSILAVMSLLIWYQY---FPLS 310
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ ++K I + L I G + F I + L AN++ +P+
Sbjct: 311 AFLRKFAYRKWGKIVRFCLGLIHLQCGIL--LIFTPVQFFFFEGISLTALPANLVIVPLY 368
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAH---RISVAHNEFCIGRIPET 178
SFV++P LI +L + + ++ + LD + I+ +S + I +
Sbjct: 369 SFVLVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWL--IIDL 426
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ + I+ L + ++ + LF + + G +A
Sbjct: 427 AILFILYGILHARTALYWYKRYALLLCCQCVFYLF-QLDKVPLQWITFDVGQGLA 480
>gi|303231465|ref|ZP_07318196.1| ComEC/Rec2-like protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513902|gb|EFL55913.1| ComEC/Rec2-like protein [Veillonella atypica ACS-049-V-Sch6]
Length = 730
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 40/222 (18%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ Y + L P D +F + + F +P
Sbjct: 374 SRMYTAKQGLAVTAILFLLYDPLLIL-----DVSFQLSFGATYGLLLF-GMP-------- 419
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ I+ + + I F + +FH + + L A I+ P+L
Sbjct: 420 ----LYRWITVLPPIVKAPLVLCIS--AQLLLIPFQLYYFHYLSLASLFAAIIITPLLDI 473
Query: 125 VVIP--AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI-SVAHNE----FCIGRIPE 177
++ I LL+ + + +D I+ I + + N + IG I
Sbjct: 474 AIVMLFGCTIISLLIPIGMVWNV-------IDWILTICLYVNAHLANSSICLWWIGTISA 526
Query: 178 TSFVTI--VVEFLLMVFCKTNIRHI----GSIMIGITIIILF 213
T V V L + ++ G +++GI II +
Sbjct: 527 TLGVLYYGCVGLLYINLVSLKLKFRTFTKGIVLMGIGIIAIA 568
>gi|329924043|ref|ZP_08279306.1| DNA internalization competence protein ComEC/Rec2-like protein
[Paenibacillus sp. HGF5]
gi|328940882|gb|EGG37190.1| DNA internalization competence protein ComEC/Rec2-like protein
[Paenibacillus sp. HGF5]
Length = 849
Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 23/182 (12%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
++ +A L P F L + +F + + + F +PK++ W +
Sbjct: 299 ILSVAALAMLV--WNPYF--LVNVSFQLSFIVTAGLMIF--VPKLMPLLTFLPRWLGGTV 352
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
I + I +F+ + + + AN++ +P++S VV+P G+++
Sbjct: 353 G-------------ITVVAQLISFPLTIYYFNQVSLISVFANLILVPVISLVVLPLGMVS 399
Query: 134 ILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+L+ + + V W I I ++ + + P +++ L
Sbjct: 400 LLMGWVWMRGAGWLA-AVTEWLNHITFRIVEWMNGSSVFMTLWPSPSLAWILCYFVVLYA 458
Query: 191 VF 192
+
Sbjct: 459 LL 460
>gi|312127088|ref|YP_003991962.1| DNA internalization-related competence protein comec/rec2
[Caldicellulosiruptor hydrothermalis 108]
gi|311777107|gb|ADQ06593.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor hydrothermalis 108]
Length = 752
Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 52/129 (40%), Gaps = 15/129 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I F ++ + +K +
Sbjct: 330 LFDIGFQLSFLSVLSIILFCKG-------------IYEYFAKLKIPRGVSSLIAVSISAQ 376
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
+ +F + V + NI+A+P+ VV +GL+ + ++ ++D +PF +
Sbjct: 377 ILILPLMAYYFSEVSVISFLTNIVAVPVAGAVVP-SGLLYFIFLVFNIDILPFKWFLEVC 435
Query: 153 LDIIIHIAH 161
++++++++
Sbjct: 436 VNVLMYLSR 444
>gi|312886218|ref|ZP_07745833.1| ComEC/Rec2-related protein [Mucilaginibacter paludis DSM 18603]
gi|311301325|gb|EFQ78379.1| ComEC/Rec2-related protein [Mucilaginibacter paludis DSM 18603]
Length = 703
Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 64/196 (32%), Gaps = 20/196 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F Y + I W K +++ + ++
Sbjct: 362 DAGFQLSYLAVFGIII---------IQPPIYRWLSFKNKYLRE---VWLVCSVSLSAQII 409
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWGLD 154
I +FH PVY L +NI I I S +V+ AG++ + L + + ++ +
Sbjct: 410 LLPIGILYFHDFPVYFLASNIFII-IPSAIVMYAGILYLALPPIPWLSYGLGWLLDKTIS 468
Query: 155 II---IHIAHR--ISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-KTNIRHIGSIMIGIT 208
I+ + + + + + + I F + K ++ I + ++
Sbjct: 469 IMTKTLALMEHAPFATINKLWLSPAEFILCYALIAGIFCFLTLRNKQWLKFSLVIGLALS 528
Query: 209 IIILFTFPYSFSPDLL 224
I I S + L
Sbjct: 529 ISISLKTFRSSRTNAL 544
>gi|301347996|ref|ZP_07228737.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB056]
Length = 525
Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 75/251 (29%), Gaps = 18/251 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P G F Y + Y +
Sbjct: 57 LLLKQPIKPFTLLVYSASLLLLMDPFSVLSAG-----FWLSYGACFILIRIYQTIAQLPE 111
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + K F++++ + S + F I + NI+A+PI
Sbjct: 112 QHFLSLSS-------KMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 164
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 165 VGSVIVPLNIMAACAWFVIKPFG--NMLFHFNDMLLSILLSYLGLLEKLSLTLQGISLTP 222
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
S + I +++ K + I+ + ++I+ ++L +G + L
Sbjct: 223 LSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNILDVGQGQAIFLQHP 282
Query: 238 NTLISNYSNPP 248
+
Sbjct: 283 QQNWLIDTGGS 293
>gi|28198275|ref|NP_778589.1| DNA uptake protein [Xylella fastidiosa Temecula1]
gi|28056345|gb|AAO28238.1| DNA uptake protein [Xylella fastidiosa Temecula1]
Length = 789
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 46/161 (28%), Gaps = 24/161 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + +
Sbjct: 346 GFWLSFAGVA---------------------WLMWCMQDGHAASCRGFLSAQGVATLGLL 384
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
F + F + G +AN++AIP+ +FVV+P L+ L L + + +
Sbjct: 385 PFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLGTALEALVPGWGSPMWRLGGNFFQW 444
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ ++ + + + ++ ++ +
Sbjct: 445 SWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWLLLPRG 485
Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 63/198 (31%), Gaps = 9/198 (4%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP--KMIYSSESHN 66
A + + RL P PG FD + +GI A GY + + ++ N
Sbjct: 133 SALHAGSVWQLHVRLRAPHSLMNPGGFDSERYALAQGIVATGYVRMPTMARELAAATGIN 192
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W + + I + L E + + + + GL +++AI
Sbjct: 193 AWRERMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHV-- 249
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ +++SL F +AW IA + + S T+
Sbjct: 250 --GMVAGACALLVSLLWRVFPHLAW--RWPRPIAMALIAVPAAAGYTVLAGASLPTVRTA 305
Query: 187 FLLMVFCKTNIRHIGSIM 204
++ + + ++
Sbjct: 306 LMIGIVALARLTRRRAMP 323
>gi|328675321|gb|AEB27996.1| competence protein [Francisella cf. novicida 3523]
Length = 672
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 36/210 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L L+ +FS+ + +
Sbjct: 263 KRISIVKSLLVAFVIILLLDFESIYSISLW-LSFSAVILLVIISIALQQYRSKLAK---- 317
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
TY + + +F + ++ANI+AIP++SF
Sbjct: 318 -------------------TLLAQTYLAIFLVPISVYYFGGFSIVSILANIVAIPLVSFF 358
Query: 126 VIPAGLIAILLMILS-----LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++P L+++LL + L + + L + + A IS S
Sbjct: 359 IVPLLLLSLLLSFIGVKLWLLPMLFLKFLVAYLSFLTNYAGFISYWS------YFSFFSL 412
Query: 181 VTIVVEFLLMVF-CKTNIRHIGSIMIGITI 209
V ++ +L++F ++R +G M +
Sbjct: 413 VITILGIILVIFPFSKSLRILGLAMCLVFF 442
>gi|222529900|ref|YP_002573782.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor bescii DSM 6725]
gi|222456747|gb|ACM61009.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor bescii DSM 6725]
Length = 752
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I F ++ + +K +
Sbjct: 330 LFDIGFQLSFLSVLSIILFCKG-------------IYEYFAKLKIPRGISSLIAVSISAQ 376
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
+ +F I V + NI+A+P+ VV AGL+ LL++ ++D +PF +
Sbjct: 377 ILILPLIAYYFSEISVISFLTNIVAVPVAGAVVP-AGLLYCLLLVFNIDILPFKWFLEVC 435
Query: 153 LDIIIHIAH 161
++++++++
Sbjct: 436 VNVLMYLSR 444
>gi|332705351|ref|ZP_08425429.1| ComEC/Rec2-related protein [Lyngbya majuscula 3L]
gi|332355711|gb|EGJ35173.1| ComEC/Rec2-related protein [Lyngbya majuscula 3L]
Length = 786
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/263 (8%), Positives = 74/263 (28%), Gaps = 38/263 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + +++ + + + + + +
Sbjct: 364 IWDLGFQLSFLATLGLLI-------------TAPGIIQRLDWLPPAIASLV--AVPIAAA 408
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ F + Y + +++A P++S + + + A L + + GL
Sbjct: 409 VWTLPLQLYVFQVVASYSIPVSVIATPLISIITLGGIVSA-------LAGLIWPTAGSGL 461
Query: 154 DIIIH--------IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGSI 203
+++ + + + + + + + R
Sbjct: 462 AWLLYYPTHGLMGLVEFFNQLPGSSVAVGKISLGQLLFLYGLIALACLIKWLHPRWWLIS 521
Query: 204 MIGITIIILFTFPYSFS-PDLLISEKGN---LVALVDKNTLISNYSNPP--SFIFSQWKS 257
++ +T+++L + + + + GN LV + N NP F +
Sbjct: 522 LVAVTVVVLPQWQQASKLFQVTVLATGNNQILVIQDQGQVTLVNSGNPDTVRFTVLPFLQ 581
Query: 258 ALITPFHEAPHVQKEDLQEKNQS 280
+ Q ++
Sbjct: 582 KQGINDINWAVALDKQPQLRSGW 604
>gi|229198453|ref|ZP_04325157.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus m1293]
gi|228584956|gb|EEK43070.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus m1293]
Length = 663
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 17/136 (12%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+ I P +I G+ RLS + + F Y + IG+
Sbjct: 160 LYMILAGVSPSVIRASITGVFMLIAFMCSIRLSSLDALSITAICMLIFDPY--LVFNIGF 217
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+S S I+ S I ++ L+ HF Y
Sbjct: 218 QFSFVGSFALLLSAPLLLESGNGVIRNSIY------ISLISQLVSTPILLYHFGYFSPYS 271
Query: 112 LIANILAIPILSFVVI 127
+ NIL +P LS VV+
Sbjct: 272 IFLNILYVPFLSLVVL 287
>gi|312961641|ref|ZP_07776139.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas fluorescens WH6]
gi|311283900|gb|EFQ62483.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas fluorescens WH6]
Length = 741
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 65/191 (34%), Gaps = 26/191 (13%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + ++ + + +S+ W + +
Sbjct: 314 VLVLEPLASLQPG-----FWLSFAAVAVLVLAFGGRLGPWSAWQ----AWTRPQWLIAIG 364
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA-ILLMIL 139
L + +G + V +AN++A+P +S VV+P L+ LL +
Sbjct: 365 LFPVLLVLGLP---------------VSVSAPLANLVAVPWISLVVLPLALLGTALLWVP 409
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
L + LD + ++ + +P + + +L++ K R
Sbjct: 410 FLGAGIVWLAGGALDGLFQGLAWLAGQVPAWIPAEVPLRYWCVSLAGAILLLLPKGVPFR 469
Query: 199 HIGSIMIGITI 209
+G M+ + +
Sbjct: 470 LLGWPMLLLAV 480
>gi|159900163|ref|YP_001546410.1| ComEC/Rec2-related protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893202|gb|ABX06282.1| ComEC/Rec2-related protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 493
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/163 (11%), Positives = 52/163 (31%), Gaps = 14/163 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F +++ + ++ W+ + + + +
Sbjct: 328 LWDLGFQLSALATASLFAW----GKPIEAQLRQWLRWRWLEWMIEPLTATLA------AQ 377
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAW 151
++ HF + + +AN+L +P++ ++ ++A L + L + +
Sbjct: 378 IWTLPIILYHFGNLSLIAPVANVLIVPVVPLIMASGAMLA-CLGLFGRWLALLALPITWA 436
Query: 152 GLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFC 193
L ++ A ++ I R + V +
Sbjct: 437 ALTWVVEAAEWLADLSWAAVEIPRFGMSWLVLAYGLSVGAKAW 479
>gi|238753505|ref|ZP_04614868.1| hypothetical protein yruck0001_20350 [Yersinia ruckeri ATCC 29473]
gi|238708458|gb|EEQ00813.1| hypothetical protein yruck0001_20350 [Yersinia ruckeri ATCC 29473]
Length = 764
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/314 (10%), Positives = 90/314 (28%), Gaps = 29/314 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY-SIPKMIYSSESHNT 67
+ G+ LS P +F + ++ +++ P + + H
Sbjct: 309 SSWQIWLWAVGLILLSEPLSVLS-----DSFWLSCLAVFSLIFWFQWAPMSSHRASGHYG 363
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
++ + + + I FH I + + AN+ A+PI+SF+ +
Sbjct: 364 LLFRWLH-------------VQLGMMLLLAPLQIGLFHGISLSAIPANLWAVPIVSFITV 410
Query: 128 PAGLIAIL-LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P L+A++ L + + L + + +S +
Sbjct: 411 PTVLLALISSASTHLAELWWWASNASLTLAMLPLDSLS-----QSWLPRGGDYLALSFIG 465
Query: 187 FLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+ +V + R ++ + I ++F + L ++++
Sbjct: 466 WFAIVIWRFQWWRSHSVSVLVLCINLIFLTSRRDMAGWRVDMLDIGHGLAVVIERRQRAV 525
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ + +I P+ ++ E + + +F
Sbjct: 526 VFDTGNRWKQGSMADKVILPYLNWRGLRVEQIILSHDHQDHTGGVYALRAEFPSATIRAP 585
Query: 303 VGCHRSDVIVGVLK 316
+ + L
Sbjct: 586 FIMTDNGRPMATLP 599
>gi|299141884|ref|ZP_07035019.1| ComEC/Rec2 family protein [Prevotella oris C735]
gi|298576735|gb|EFI48606.1| ComEC/Rec2 family protein [Prevotella oris C735]
Length = 521
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 42/136 (30%), Gaps = 12/136 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + ++ I Y +++ + W +
Sbjct: 345 LWDVGFQLSFMAVAGILIAYKPLFQLFNPITRL-LRWAWG-----------MICVSVSAQ 392
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
L+ +F Y L+ N + +P + ++ A L + ++L N+ F M
Sbjct: 393 LLTFPLLLHYFGRFSTYFLLTNFIVVPAATAILYLAFLTVLSTPFVALQNLIFNAMTTIT 452
Query: 154 DIIIHIAHRISVAHNE 169
+ IS
Sbjct: 453 GWMNTSVTAISRLPYA 468
>gi|332091784|gb|EGI96863.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
dysenteriae 155-74]
Length = 398
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 169 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 217
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 218 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 271
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 272 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIAERWQWLSF 328
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + + +++ + PD
Sbjct: 329 SP--WFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPD 367
>gi|163816648|ref|ZP_02208011.1| hypothetical protein COPEUT_02838 [Coprococcus eutactus ATCC 27759]
gi|158447905|gb|EDP24900.1| hypothetical protein COPEUT_02838 [Coprococcus eutactus ATCC 27759]
Length = 808
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/126 (11%), Positives = 42/126 (33%), Gaps = 20/126 (15%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + + I + I I + +
Sbjct: 350 DAGFQLSFAAVLGI-----------------AVVDPMLEKIVGHGGRLSALRINVSVTLT 392
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGLIAILLMILSLDNIPFGVMAWG 152
+ ++ +F+ P+Y ++ N++ +P +S ++ + A ++ + ++ +A
Sbjct: 393 TTPLVVYYFYQFPLYSVVLNMVVVPFVSVLIFCSMAAIFFGMMPGVWGFASVTAQFLAMP 452
Query: 153 LDIIIH 158
+ I+
Sbjct: 453 VRYILA 458
>gi|284048789|ref|YP_003399128.1| DNA internalization-related competence protein ComEC/Rec2
[Acidaminococcus fermentans DSM 20731]
gi|283953010|gb|ADB47813.1| DNA internalization-related competence protein ComEC/Rec2
[Acidaminococcus fermentans DSM 20731]
Length = 785
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/231 (15%), Positives = 82/231 (35%), Gaps = 26/231 (11%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWK-KISSIKQSFLNEIR----------ANIGTY 91
+ G++AI P ++T + ++++ ++ ++
Sbjct: 311 FLGLAAILLLSWNPWWCRDPGFQLSFTAALGLMTLRKPVSEKLDVFLPRPVAGGLSVPIS 370
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL---DNIPFGV 148
+ FL+ HFH + + L+AN+L +P+LS V I +L L L V
Sbjct: 371 AQLLSLPFLVIHFHTLSLVSLLANVLLVPVLSLCVT-GSAIGAILGSLGLILPGRPVLAV 429
Query: 149 MAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVT--IVVEFLLMVFC----KTNIRHIG 201
++ + + +++ G++P + +++ +L + +R
Sbjct: 430 VSQLMGFALWGGEKLAQLPGTHLVTGQVPLWGWPLYFLLIGAVLEKGWFQPFRPRLRRGT 489
Query: 202 SIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKNTLISNYSNPP 248
+ G + L F P +F+ L +G+ ++ I
Sbjct: 490 ILAAGFGLGALVAFCQFCPQAFTVYFLDVGQGDCAVVITPEREIIVVDTGG 540
>gi|126436101|ref|YP_001071792.1| ComEC/Rec2-related protein [Mycobacterium sp. JLS]
gi|126235901|gb|ABN99301.1| ComEC/Rec2-related protein [Mycobacterium sp. JLS]
Length = 514
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/187 (8%), Positives = 48/187 (25%), Gaps = 15/187 (8%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F+ + + +I S + + + A + T +
Sbjct: 335 DAGFALSVAATAGLV-------VIAPVWSRRLTGRGWPKPVADAVGVAMAAQLVTAPLVA 387
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-IPFGVMAWGLD 154
+ + ++ANI+ P++ + + A L + + L
Sbjct: 388 GIS------GRVSLVSVLANIVVAPVIPPITVIGTAAAALCWLWPAGAGLLIRFTGPPLW 441
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ +A + + + +V R + + ++
Sbjct: 442 WLLRVADWAAAVPGASVPVPSGWAGVGLVAAGGIALVVLW-RWRWVRLAAGAAVLGLVAW 500
Query: 215 FPYSFSP 221
+
Sbjct: 501 SASGHAA 507
>gi|332981262|ref|YP_004462703.1| DNA internalization-related competence protein ComEC/Rec2 [Mahella
australiensis 50-1 BON]
gi|332698940|gb|AEE95881.1| DNA internalization-related competence protein ComEC/Rec2 [Mahella
australiensis 50-1 BON]
Length = 769
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 65/209 (31%), Gaps = 31/209 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+++ F + +++ Y + +
Sbjct: 335 IYNIGFMLSFAATASLLSIYKPIEDFLARFMPKALAE--------------ICAATLAPQ 380
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + +F+ IP L+ANI IP F+ + +++ L +L + +A+ L
Sbjct: 381 IATLPIIAYYFNQIPTLSLLANIAIIPFNGFIFLAGLVLSALGALLP---VVASTIAYPL 437
Query: 154 DIIIHIAHRI----SVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIR-----HIG 201
II+ + + + +P S IV ++ + + R
Sbjct: 438 YIILRSVNIFTLAMAGIP--WVAINVPSPSIPLIVAYYITICAVFLWRRMSRRQVTSIAV 495
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGN 230
+++ I I + ++ + G
Sbjct: 496 ALVFIIAIEAFTVWANDNRLKVVFLDVGQ 524
>gi|293609879|ref|ZP_06692181.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828331|gb|EFF86694.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 810
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 67/213 (31%), Gaps = 15/213 (7%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
++ I PF + L P G F Y + Y +
Sbjct: 341 LVLIKVAVKPFSLLVYSASLLLLFDPFSALSAG-----FWLSYGSCFILLRIYQTIEQAP 395
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ S + + + ++I + ++ F I NI+A+P
Sbjct: 396 NLVSTSLLS-------RIILFSKILIESQGKIFIALCPLMLIFFQQITWVAPFTNIIAVP 448
Query: 121 ILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+L V++P + A + ++ N+ F + + I++ + + +
Sbjct: 449 LLGGVIVPLNIFAACVWLIFNSFGNLLFQISDVLISIVLSCFNLLEKLSLPLQGFSLTPL 508
Query: 179 SFVTIVVEFLLMVFCKTNI-RHIGSIMIGITII 210
V + +++ + + + G I II
Sbjct: 509 DLVCLSFVIIILFLPRGVLPKSWGLICCLPLII 541
>gi|300087171|ref|YP_003757693.1| DNA internalization-like competence protein ComEC/Rec2
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299526904|gb|ADJ25372.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 792
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/195 (10%), Positives = 60/195 (30%), Gaps = 4/195 (2%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMI-YSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+ +F + ++ + + + + + + + + T
Sbjct: 331 LWSASFQMSFGAMAGLIFLLPGMEHLTRRLVGRFPGSQSRFYQPAYYIGAGL--AVTTAA 388
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW- 151
+ + +F + G IA + A+P++ ++ A L + + +P + W
Sbjct: 389 VVGVAPLIAYYFGALATAGGIATLAAMPVVPLIIFGALTTGALALASPVLAVPTAALTWA 448
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GL ++ + + ++ + L R + +T
Sbjct: 449 GLTYLVGVVDWFARWPLPEFGVFDAGFIWLFYGLLGLGAWRLNRWYRRQAELEPPVTRTG 508
Query: 212 LFTFPYSFSPDLLIS 226
P S L+++
Sbjct: 509 FRWKPAVISLLLIVA 523
>gi|163787473|ref|ZP_02181920.1| competence protein [Flavobacteriales bacterium ALC-1]
gi|159877361|gb|EDP71418.1| competence protein [Flavobacteriales bacterium ALC-1]
Length = 610
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 18/177 (10%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
+ L P LF+ F Y + I S+ +IY W K I
Sbjct: 274 AFVILLFKP-----TFLFEVGFQMSYLAVLGIV---SVQPIIYKLWKPKYWIIDKPWQI- 324
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ A + +FH P I+NI+ IP L ++ + L +
Sbjct: 325 --------FTVTLAAQAGVVPISLFYFHQFPGLFFISNIVVIPFLGLILGFGLFVIALAL 376
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+ LD+ ++ +D + + ++ +F IP T I F+++ K
Sbjct: 377 MNILDSSIVTAYSFVIDSLNNFITWVAQFE-DFLFRDIPFTILQVICSYFIIIGLVK 432
>gi|260890129|ref|ZP_05901392.1| hypothetical protein GCWU000323_01291 [Leptotrichia hofstadii
F0254]
gi|260860152|gb|EEX74652.1| putative COME operon protein 3 [Leptotrichia hofstadii F0254]
Length = 537
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 8/115 (6%)
Query: 29 PAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
P LFD + Y + AI + K Y + + + + +
Sbjct: 352 VLNPYSLFDISMQLSYAAVIAIIFVNPEFKKFYEKKILDKIKNEVLKNTVDLIF------ 405
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
+ ++ + +F +P++ + NI+ IPI VVI A+LL I L
Sbjct: 406 LSLTIQITSIPLFLYYFEKLPLFSFLLNIVGIPI-GTVVIQCLFFAVLLNIFKLS 459
>gi|255994725|ref|ZP_05427860.1| putative DNA internalization-related competence protein ComEC/Rec2
[Eubacterium saphenum ATCC 49989]
gi|255993438|gb|EEU03527.1| putative DNA internalization-related competence protein ComEC/Rec2
[Eubacterium saphenum ATCC 49989]
Length = 831
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/220 (12%), Positives = 58/220 (26%), Gaps = 38/220 (17%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
T+ + F + + A P + D F + I I
Sbjct: 343 TRIHRAFDLLN-VSFVVLFI--LAVAKPLMIMDIGFQMSFLAIITIAVIARRLYKFKELG 399
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S S+F F+ +G + N + +
Sbjct: 400 SL------------------------AGVQLGTSLFTQSVFNLFNPFGFLVNFPVVYLAG 435
Query: 124 FVVIPAGLIAILLMI---LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
FVV+ G++ +L+M + + + ++I + + P F
Sbjct: 436 FVVV-GGMLLLLVMPLDVFVITKVITSFLHAVCKVLIAVNDWFYAGGRFSYVVPAPSMFF 494
Query: 181 VTIVVEFLL------MVFCKTNIRHIGSIMIGITIIILFT 214
+ I + K R + + + I++
Sbjct: 495 LIIYYGGIFFFSSEIFAVWKARKRRKKIVAMVVCILMCAL 534
>gi|317491460|ref|ZP_07949896.1| competence protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316921007|gb|EFV42330.1| competence protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 757
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 89/263 (33%), Gaps = 23/263 (8%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++++ ++Y + + ++ ++ +
Sbjct: 333 SFWLSVIAVTSLLFWYWFAPLPARFTIAKRYIGLRLLHLQLGIALCL------------M 380
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI-PFGVMAWGLDII 156
I FH + L AN +A+P+++++V+P L+ L + D + V + LD +
Sbjct: 381 PVQIYLFHGVSGGALWANFIAVPLVTYLVVPMILLG-LATLWGADPFDAWHVAGFLLDRM 439
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIIILFT 214
+ ++ + + V+ + V F K + G + I + + +
Sbjct: 440 QWV---LAHLPTLWVDMSERDVWISLSVLMLFIAVRSFSKRGLLLWGLVQISVFLAFVSM 496
Query: 215 FPYSF---SPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
S + G +A+ ++ Y + S+ I P+ +
Sbjct: 497 QKTSEDEWRVHMFDVGHGLSIAI-ERQGRALLYDTGNKWEGGDVASSEIIPYLRWHGLAL 555
Query: 272 EDLQEKNQSSLKEILRSMQPRKF 294
+ + ++ S R+ + F
Sbjct: 556 DGIIISHRDSDHSGGRTSLQQAF 578
>gi|314936292|ref|ZP_07843639.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus hominis subsp. hominis C80]
gi|313654911|gb|EFS18656.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus hominis subsp. hominis C80]
Length = 729
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 12/158 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ P + I P + + I + + Y I S
Sbjct: 253 TNFAPSALRAVLTAITFFIIPKAFKISSISVLSLVFLLMTIWNMNFAYDIGFQFSFIISF 312
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
K + + + N I I S+ I I HF+ G I+N++ +P+ SF+
Sbjct: 313 FILLSKPLFNNQSILKNYIYITI--IAQFSSMIISIYHFNQFQWIGFISNVIFVPLYSFI 370
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
+ P ++ + D L I +A+++
Sbjct: 371 IFPLSIVLFIFYHFFSD----------LRYINMVANQL 398
>gi|228476141|ref|ZP_04060849.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus hominis SK119]
gi|228269964|gb|EEK11444.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus hominis SK119]
Length = 729
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 12/158 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ P + I P + + I + + Y I S
Sbjct: 253 TNFAPSALRAVLTAITFFIIPKAFKISSISVLSLVFLLMTIWNMNFAYDIGFQFSFIISF 312
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
K + + + N I I S+ I I HF+ G I+N++ +P+ SF+
Sbjct: 313 FILLSKPLFNNQSILKNYIYITI--IAQFSSMIISIYHFNQFQWIGFISNVIFVPLYSFI 370
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
+ P ++ + D L I +A+++
Sbjct: 371 IFPLSIVLFIFYHFFSD----------LRYINMVANQL 398
>gi|210623835|ref|ZP_03294084.1| hypothetical protein CLOHIR_02035 [Clostridium hiranonis DSM 13275]
gi|210153330|gb|EEA84336.1| hypothetical protein CLOHIR_02035 [Clostridium hiranonis DSM 13275]
Length = 439
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 53/163 (32%), Gaps = 31/163 (19%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ +K D I + P G F + +I YFY I
Sbjct: 249 FVVDRKRDGISTLAIIASVMIFLNPFVIYNTG-----FQLSFLATFSIVYFYPI------ 297
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
I + A++ + ++ F I + +I+N+LA+P
Sbjct: 298 --------------INKRIKFS-AASVTIAANIMTLPIIVYSFDGISILSVISNVLAVPF 342
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD-IIIHIAHRI 163
++FVV L I + GL+ +II I + I
Sbjct: 343 VAFVVYIDVASIFLFEIF----PFIASIVAGLNSVIITIIYFI 381
>gi|56963413|ref|YP_175144.1| late competence protein ComEC [Bacillus clausii KSM-K16]
gi|56909656|dbj|BAD64183.1| late competence protein ComEC [Bacillus clausii KSM-K16]
Length = 768
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/236 (15%), Positives = 82/236 (34%), Gaps = 35/236 (14%)
Query: 1 MLSITK-KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+ ++ K + P TI + L P LF F + A+ +
Sbjct: 297 LFALRKWRIHPLFGFATIYFLYLLLDPYK-----LFQLGFQLSFLVSFALIF-------- 343
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
S T ++Q + T + + HF+ + L+ N++ I
Sbjct: 344 ----SAKTIQTANGGYLRQ------MCTVTTIAQFAGLPLIFFHFYEWSPFSLLLNLVYI 393
Query: 120 PILSFVVIPAGLIAILLMILSLDN--IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
P++SF+V+P ++++ + + + G++ L + ++S + + +G+ P
Sbjct: 394 PLVSFIVLPFSFLSLIAFVWLPEQVNLFIGLLESLLTFVHPTLLKLSESTFQLVLGKPPV 453
Query: 178 TSFVTIVVEFLLMVF-------CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
V + L F I + + I + + + S + +I
Sbjct: 454 W-LVVAMYGALAFAFVHWQEQKWPLPIAFLPFVACLI-VGAVAPYVQSKAAVTMID 507
>gi|288802285|ref|ZP_06407725.1| ComEC/Rec2 family protein [Prevotella melaninogenica D18]
gi|288335252|gb|EFC73687.1| ComEC/Rec2 family protein [Prevotella melaninogenica D18]
Length = 551
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 60/190 (31%), Gaps = 21/190 (11%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ I L LFD F + + +I FY + + + + +
Sbjct: 374 ALTAIIMLVSNPN----SLFDIGFQLSFISVWSILLFYPLIYELIPLQQKKSLFVFR--W 427
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ + + + +F + +++++A+P +V L +
Sbjct: 428 LWGMIA------VSLAAQLGTAPLIAFYFGRVSTIFAVSSLIAVPCTMLIV----LASFC 477
Query: 136 LMILSLDNIPFGVMAWGL----DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
L++LS + + + + H ++ CI + T F + F+LM
Sbjct: 478 LLLLSPLPSLSSFIGKCICVITEGLNTSLHWLASLPCA-CIEDVHVTIFQLFIYYFMLMA 536
Query: 192 FCKTNIRHIG 201
G
Sbjct: 537 IWILWSFLAG 546
>gi|319899932|ref|YP_004159660.1| ComEC/Rec2-related protein [Bacteroides helcogenes P 36-108]
gi|319414963|gb|ADV42074.1| ComEC/Rec2-related protein [Bacteroides helcogenes P 36-108]
Length = 695
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 44/134 (32%), Gaps = 12/134 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + +++I M+ + +
Sbjct: 353 LFDVGFQLSFVAVASILAVQPKLYML------------WKVKNRFLRYGWGLVTVSIAAQ 400
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F + L+ N+ IP++S ++ + ++ +L + SL V+ +
Sbjct: 401 IGTAPLVMLYFSRFSTHFLLTNLWVIPMVSLILYSSVILLVLTPLPSLQFAFSSVVGTLV 460
Query: 154 DIIIHIAHRISVAH 167
I + I
Sbjct: 461 HIQNEVLRWIEHLP 474
>gi|227538321|ref|ZP_03968370.1| competence protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241836|gb|EEI91851.1| competence protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 692
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 46/163 (28%), Gaps = 24/163 (14%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F Y + I + +Y + K + + I
Sbjct: 359 DLGFQLSYLAVLGIVTVLPLLNKLYLPKG------KYLKIFMEYMYISIA------AQLF 406
Query: 96 ASIFLIKHFHCIPVYGLIANI-LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ +F P Y LIAN+ +A+P + + ++L LD + M L+
Sbjct: 407 TLPLVFYYFGQFPNYFLIANLFIALPSTCMMYV-----GLVLAFFPLD-LLSQFMGKILE 460
Query: 155 IIIHIA----HRISVAHNEFCIG-RIPETSFVTIVVEFLLMVF 192
+I + G + + + +
Sbjct: 461 WLIQFMWEGLRILDGLPGSLIQGVVFSIDQVILLFLACFFLSI 503
>gi|325269744|ref|ZP_08136355.1| hypothetical protein HMPREF9141_1565 [Prevotella multiformis DSM
16608]
gi|324987945|gb|EGC19917.1| hypothetical protein HMPREF9141_1565 [Prevotella multiformis DSM
16608]
Length = 514
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 55/170 (32%), Gaps = 11/170 (6%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD F + + +I FY + + T + + + +
Sbjct: 350 SLFDIGFQLSFVSVWSILLFYPLL--------YQTLSSRYLKHCAAGRWLWGMTAVSVAA 401
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAW 151
+ ++ +F + +++A+P + ++I + + ++L L + ++
Sbjct: 402 QLGTAPLIVFYFCRFSTVFIPGSLIAVPG-TMMIIWSSVFMLILSPFPALSSFLCQMVGQ 460
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
+ H ++ IG + T V +LM G
Sbjct: 461 LVYCQDTALHWLASFPWA-SIGNLHVTILQLAVYYAMLMGVWLLWSFLAG 509
>gi|301512408|ref|ZP_07237645.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB058]
Length = 573
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 75/251 (29%), Gaps = 18/251 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P G F Y + Y +
Sbjct: 105 LLLKQPIKPFTLLVYSASLLLLMDPFSVLSAG-----FWLSYGACFILIRIYQTIAQLPE 159
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + K F++++ + S + F I + NI+A+PI
Sbjct: 160 QHFLSLSS-------KMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 212
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 213 VGSVIVPLNIMAACAWFVIKPFG--NMLFHFNDMLLSILLSYLGLLEKLSLTLQGISLTP 270
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
S + I +++ K + I+ + ++I+ ++L +G + L
Sbjct: 271 LSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNILDVGQGQAIFLQHP 330
Query: 238 NTLISNYSNPP 248
+
Sbjct: 331 QQNWLIDTGGS 341
>gi|330891488|gb|EGH24149.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. mori str. 301020]
Length = 399
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+ +S +V+P L+ LL+ + + + L+ + ++
Sbjct: 37 ISLSGPFANLLAVLWVSLIVLPPALLGTLLLPVPIVGEGLLWLAGGALEWLFMFLGSVAA 96
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P +++ ++ +++ K +R +G ++ + + + ++L
Sbjct: 97 VLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMRPLGWPLLLLCVFPPLDSVPAGQVEVL 156
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 157 QLDVGQGLAIL 167
>gi|71899425|ref|ZP_00681584.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Ann-1]
gi|71730834|gb|EAO32906.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Ann-1]
Length = 825
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 24/161 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + +
Sbjct: 382 GFWLSFAGVAWLMWCMQDGHAAPWRGFLSA---------------------QGVATLGLL 420
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
F + F + G +AN++AIP+ +FVV+P L+ L L + + +
Sbjct: 421 PFTVALFGQVSFVGPLANLIAIPLWTFVVVPLVLLGTALEALVPGWGSPMWRLGGNCFQW 480
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ ++ + + + ++ ++ +
Sbjct: 481 SWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWLLLPRG 521
Score = 40.6 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 9/198 (4%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP--KMIYSSESHN 66
A + + RL P PG FD + +GI A GY + + + ++ N
Sbjct: 169 SALHAGSVWQLHVRLRAPHSLLNPGGFDSERYALAQGIVATGYVRTPTMARELAAATGIN 228
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W + + I + L E + + + + GL +++AI
Sbjct: 229 AWRERMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHV-- 285
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ +++SL F +AW +A + + S T+
Sbjct: 286 --GMVAGACALLVSLLWRVFPHLAW--RWPRPLAMALIAVPAAAGYTVLAGASLPTVRTA 341
Query: 187 FLLMVFCKTNIRHIGSIM 204
++ + + ++
Sbjct: 342 LMIGIVALARLTRRRAMP 359
>gi|257092671|ref|YP_003166312.1| DNA internalization-like competence protein ComEC/Rec2 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257045195|gb|ACV34383.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 772
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/226 (13%), Positives = 68/226 (30%), Gaps = 28/226 (12%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P PG F + + + + +++ +
Sbjct: 351 DPWAVLSPG-----FWLSFAAVGLLFFV---------GTGRIGAARGWRAALANWGATQW 396
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+GT + AN +AIP++SFV+ P L+ ++ L
Sbjct: 397 AVTVGTLPLLLFLFQQF------SLVSPPANAVAIPLVSFVITPLALVFAVI-PWPL--- 446
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSI 203
W L ++ ++V + P + + V + ++ + R +G
Sbjct: 447 LLHFDHWLLAGLMRFLEWLAVWP-VWEQAAPPLAATLLAVPGAIWLLLPRGFPARWLGVC 505
Query: 204 MIGITIIILFTFPY--SFSPDLLISEKGNLVALVDKNTLISNYSNP 247
++ ++ P D+L +G V + + + P
Sbjct: 506 LLLPALLWPAPRPALGDAWVDVLDVGQGLAVVVRTAEHTLLYDTGP 551
>gi|37525573|ref|NP_928917.1| hypothetical protein plu1629 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785001|emb|CAE13922.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 775
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/250 (11%), Positives = 79/250 (31%), Gaps = 19/250 (7%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P+ + L P +F + + A+ +++ +I W
Sbjct: 327 PWQWALWTAAMILLFDPLTVLS-----DSFWLSFFAVMALMFWFCWAPLIE--PFRYGWK 379
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
W + + + FH + L AN A+PI+SF+ +P
Sbjct: 380 WLWLRGLYMQMGMMLMLIPLQLLL----------FHGVNFAALFANFWAVPIISFITVPL 429
Query: 130 GLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
++A++ + + + ++ + + + + I + P +F+ V +
Sbjct: 430 IMLALISNFCSFIHALLWQLVDYSVTLSL-IPLPVLQQSWSETGRFPPLITFIGWFVVII 488
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP 248
+ + + +I +G+ + L ++ L +++K+ +
Sbjct: 489 WRFAWWQSYKLLITIFLGVMLCYLRRNEDYLWRFSMLDVGHGLAVIIEKDGKALIFDTAN 548
Query: 249 SFIFSQWKSA 258
+
Sbjct: 549 RWETGSMAER 558
>gi|253570298|ref|ZP_04847707.1| competence protein [Bacteroides sp. 1_1_6]
gi|298384888|ref|ZP_06994447.1| competence protein [Bacteroides sp. 1_1_14]
gi|251840679|gb|EES68761.1| competence protein [Bacteroides sp. 1_1_6]
gi|298262032|gb|EFI04897.1| competence protein [Bacteroides sp. 1_1_14]
Length = 700
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 49/146 (33%), Gaps = 21/146 (14%)
Query: 29 PAFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
P LFD F + + +I + +S I + + +
Sbjct: 352 LVNPAWLFDVGFQLSFLAVLSILMIQKPVYQLLPVKS----------RIGKYVWGLM--S 399
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + ++ +F + L+ N++ IP+++ + A ++ +LL L
Sbjct: 400 VSIAAQIGTAPLVMLYFSHFSTHFLLTNLVVIPLVTVTLY-AAVLMLLLTPLPA---VQF 455
Query: 148 VMAWGLDIIIHI----AHRISVAHNE 169
VMA + ++ + +
Sbjct: 456 VMAGAVRFLLKVLNDFVRWVEQLPYA 481
>gi|229543792|ref|ZP_04432852.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
coagulans 36D1]
gi|229328212|gb|EEN93887.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
coagulans 36D1]
Length = 760
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 77/237 (32%), Gaps = 34/237 (14%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
++ F + +A+ + + I
Sbjct: 323 YNIGFQLSFAVCAALLLSGPLLERFRGPLQKG-------------------LAISFISQL 363
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+A L F+ + GL+AN+ +P+ ++V++P +A + F + A D
Sbjct: 364 AALPILSYSFYAFSIAGLVANLFYVPLYTYVLLPLAALAFVSE---WAPPLFSIFATCFD 420
Query: 155 IIIHIAHRIS-VAHNEF---CIGRIPETSFVTIV-VEFLLMVFCKTNIRHIGSIMIGITI 209
++ ++ + + GR P + + F +V + + I +++ ++
Sbjct: 421 GLVTLSEKTGEAFDGRWSTLVTGRPPYWGLILMTGAGFYGLVAMENGKKTIRAVLPLFSV 480
Query: 210 IILFTFPYSFSPDLLIS----EKGNLVALVDK---NTLISNYSNPPSFIFSQWKSAL 259
++L + I+ +G+ + + T + + F WK
Sbjct: 481 LLLLLAANRYPLFGKITFIDVGQGDSILIRLPLSRGTYLIDTGGTVQFPEPAWKKRE 537
>gi|170694755|ref|ZP_02885906.1| ComEC/Rec2-related protein [Burkholderia graminis C4D1M]
gi|170140386|gb|EDT08563.1| ComEC/Rec2-related protein [Burkholderia graminis C4D1M]
Length = 1015
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
A++ + + + + F IP+ G +AN AIP +S +V P+ L ++L LD
Sbjct: 508 AAHVQFAVTLALAPLTVYWFAQIPLIGPLANAFAIPWVSVLVTPSVLAGVVL-PAPLDAY 566
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+ + LD++I R+S + + + + L + + +
Sbjct: 567 AWRIAHALLDVMIAGLQRLSGPRWVLWWLPQPSGWTLAAAAAGVLWCLAPRGWPLRWAAP 626
Query: 204 MIGITIIILF 213
+ + +++
Sbjct: 627 LTWLPLVVPA 636
>gi|121604112|ref|YP_981441.1| DNA internalization-like competence protein ComEC/Rec2 [Polaromonas
naphthalenivorans CJ2]
gi|120593081|gb|ABM36520.1| DNA internalization-related competence protein ComEC/Rec2
[Polaromonas naphthalenivorans CJ2]
Length = 845
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/255 (11%), Positives = 74/255 (29%), Gaps = 18/255 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ A + + P F + + + + S
Sbjct: 381 RQWPWQQAWLLAMAVVAVLDPWALM-----QAGFWLSFVAVG-VLFATDSGATRARPASA 434
Query: 66 NTWTWKKISSIKQSFLNEIRANI---GTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
K + + + + + F+ + + GL+AN LAIP +
Sbjct: 435 EGQFDSKFLPWWLARPLACLLRSAREQWVVTLALTPLSLLLFNQVSLVGLLANALAIPWV 494
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+ +V P ++ + L + AW + ++ + ++
Sbjct: 495 TLLVTPLAMLGVFYAPL------WDAAAWAVGLLTGLLQGLASWPLASVDVAAAPLWCAV 548
Query: 183 IVVEFLLMVFCKTN--IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV-DKNT 239
V ++ + R +G ++ ++ +LL ++ G A++ T
Sbjct: 549 AGVLGGGLLALRLPWHWRALGIPLLLPVLLWQPARVAPGQFELLAADIGQGNAVLVRTAT 608
Query: 240 LISNYSNPPSFIFSQ 254
Y P F
Sbjct: 609 HALLYDTGPRFSRES 623
Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 38/100 (38%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + +K P A + RL P G + P FD+ + +GI A GY + P
Sbjct: 177 LELQRKPQPLRAGERWQMTVRLKAPHGNSNPHGFDYELWLWEQGIQATGYVRASPHDAPP 236
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ ++ + +QS I A + A L+
Sbjct: 237 ARLSSSPWRHAVEGARQSVREAIYARVDDRQQAGVLAALV 276
>gi|304382685|ref|ZP_07365179.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304336310|gb|EFM02552.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 516
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/189 (9%), Positives = 56/189 (29%), Gaps = 14/189 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ + I + P L+D F + + +I + ++
Sbjct: 323 REKMSLNVLSFTACIMLVCHPLA-----LYDAGFQLSFCSMLSITLLFKPLYRLFD---- 373
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
K ++ + + + + +F Y L+ N +A+P+ + +
Sbjct: 374 ----EKWLACHRLVASLWSMTLVSFTAQIGVAPLIAYYFGRFSCYFLLTNFVAVPLATAI 429
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-RIPETSFVTIV 184
+ + L + + + VM+ + + + I+ G + +
Sbjct: 430 LYLSFLFFTVGQWSVVRLLFLKVMSAIIHALNTSLNFIAHLPYASVEGINLSVWQVAMLY 489
Query: 185 VEFLLMVFC 193
+ +
Sbjct: 490 WLIVCVCLL 498
>gi|251796205|ref|YP_003010936.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus sp. JDR-2]
gi|247543831|gb|ACT00850.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus sp. JDR-2]
Length = 863
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 48/151 (31%), Gaps = 21/151 (13%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + + + F + + ++ + A
Sbjct: 354 DVGFQLSFAVTAGLILFVPPVRRA-------------MPDWRKGKALLDLLVVTVVAQAV 400
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-- 153
+ + +F+ + + AN++ +P +SF+V+P G +A++ L G M +
Sbjct: 401 SFPLTVFYFNQFHLLSIPANLILVPFISFIVMPIGAVALI---FGLLWPLGGQMLAAVSV 457
Query: 154 ---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
D + + I P ++
Sbjct: 458 YANDWTFLLVSWLGEMDAVRTIWATPPLWWI 488
>gi|56460620|ref|YP_155901.1| DNA uptake-related membrane-associated competence protein
[Idiomarina loihiensis L2TR]
gi|56179630|gb|AAV82352.1| DNA uptake-related membrane-associated competence protein
[Idiomarina loihiensis L2TR]
Length = 765
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 77/224 (34%), Gaps = 26/224 (11%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F ++A+ +W W K + + S
Sbjct: 346 DPGFWLSITAVAALFLA--------------SWRWSKSRGRFSAVKSLWSIQWLLLVVMS 391
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGL 153
FL+ F ++ + N+L +P++SF ++P LI +L++ + + + + +
Sbjct: 392 PLSFLL--FGGFSLFAPVVNLLVLPVISFWLLPLALIGTVLVLFDSGFAVLFWQLAEFPV 449
Query: 154 DIIIHIAHRISVAH------NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+ + ++ N++ I R + + + LL+ + R +G ++
Sbjct: 450 SYLNPLLEAVAGHPANWLELNQWPITRAARFAALFALAAALLLPVSRGWHR-LGLLLCLP 508
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVA-LVDKNTLISNYSNPPSF 250
LF L + + G A +++K+ F
Sbjct: 509 VAAFLFFNQRDGKLRLHVLDVGQSQAVVLEKDGKAMLIDTGIEF 552
>gi|319943861|ref|ZP_08018142.1| DNA internalization-related competence protein ComEC/Rec2
[Lautropia mirabilis ATCC 51599]
gi|319743094|gb|EFV95500.1| DNA internalization-related competence protein ComEC/Rec2
[Lautropia mirabilis ATCC 51599]
Length = 858
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/226 (11%), Positives = 75/226 (33%), Gaps = 15/226 (6%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIY-----SSESHNTWTWKKISSIKQSFLNEIRANIGT 90
F + + A+ + P + W ++ + + R
Sbjct: 393 QAGFWLSFCAVLALVWCAQQPLGGGMEEGDALSGTRWWQQGRVGQWWAALRDGARNQW-- 450
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGV 148
+ + I F + G +AN+LAIP + V+ P + +LL + L
Sbjct: 451 AATVLLTPLTIAFFSTWSLIGPVANVLAIPWVGLVLTPMAIGVMLLAPVFPWLAGWLLKA 510
Query: 149 MAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+ L ++ + + R + ++ +LM+ +R ++ +
Sbjct: 511 LLLQLGWLMAFLRSLDALPLASIQLPRPGVFALGCALLGAVLMLAPVG-LRRPRLGVLCL 569
Query: 208 TIIILFTFPYSFSPDLLIS----EKGNLVALVDKNTLISNYSNPPS 249
++L + ++ L+++ +G+++ + + +
Sbjct: 570 LPLLLASPRHAPPDALVVTALDIGQGSMILVEQGEKRLLYDTGASR 615
>gi|187735350|ref|YP_001877462.1| ComEC/Rec2-related protein [Akkermansia muciniphila ATCC BAA-835]
gi|187425402|gb|ACD04681.1| ComEC/Rec2-related protein [Akkermansia muciniphila ATCC BAA-835]
Length = 689
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 19/187 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ +K P + L P PG F + + I
Sbjct: 291 FVLRRKGHPANILALAFILLCLMNPLQVFQPG-----FQLSFCVFAVIVCLAEWLSREKP 345
Query: 62 SESHNTWTWKKISSIKQSFLNEI------RANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
S + + +I ++ FL + + ++ HF +Y + N
Sbjct: 346 LWSPDPFIPPRIYHARERFLVRLEKACRGALIVSVGAWLASIPLTAWHFGTWNLYAPLTN 405
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI----IIHIAHRISVAHNEFC 171
+ LS +V P I++ ++ + V ++ +A ++ +
Sbjct: 406 L----CLSVLVFPLMGISLSGLMFAWCPWMLHVCNTAASWLASAMLSVAGGVASLPYSYL 461
Query: 172 IGRIPET 178
P
Sbjct: 462 SSAPPSG 468
>gi|126667252|ref|ZP_01738225.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Marinobacter sp. ELB17]
gi|126628197|gb|EAZ98821.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Marinobacter sp. ELB17]
Length = 831
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 71/214 (33%), Gaps = 28/214 (13%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
P+ + + ++ P P D F + ++ + +S
Sbjct: 354 PPWRSLLLALTVVLIADPFSPL-----DAGFWLSFCAVAVLILVFSGRL----------- 397
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+ Q L + A + + L+ + G +AN+ AIP +S VV+P
Sbjct: 398 ------GVVQGVLALVLAQTAMFAGLWPGLLLLGQNQPLA--GFVANLFAIPWVSMVVMP 449
Query: 129 AGLIAILL-MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
L LL ++ ++ ++ LD ++ I + + I I +
Sbjct: 450 LLLCGALLVALVPASSVWVTLL---LDTVLGILWQGLQWLGGWDSPTIQLGVAAAIGLAA 506
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
++++ R + + + L + +P
Sbjct: 507 VVLLALWYPQRGFRLALAVLLGLWLVSHGRFQAP 540
>gi|296122721|ref|YP_003630499.1| ComEC/Rec2-related protein [Planctomyces limnophilus DSM 3776]
gi|296015061|gb|ADG68300.1| ComEC/Rec2-related protein [Planctomyces limnophilus DSM 3776]
Length = 879
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 74/238 (31%), Gaps = 14/238 (5%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN-- 66
+P + P F + ++ + +S +
Sbjct: 405 EPLNVLGLTAVTLMILSPHDLL-----QLGFQLSFLAVATLLIVARTMGKPQVIQSQSEG 459
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSAS---ASIFLIKHFHCIPVYGLIANILAIPILS 123
+I+ I + + + I GLI NI P++
Sbjct: 460 AMAASGWRAIRGHRWLAILWQLMIATFVIWCLTTPLIAATSGVISPVGLILNIALAPLVP 519
Query: 124 FVVIPAGLIAILLMILSLDNIPF-GVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSFV 181
++ + +L MI IP G+ W L +I + + + + F + +P +
Sbjct: 520 IILWSGYITLLLGMIHPWLAIPSGGIFDWSLYWLIDVVDQAAGWRYGHFVLSPLPVEYAL 579
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT--FPYSFSPDLLISEKGNLVALVDK 237
M+ + + + + +G+ +I L +P L G+ +A++ +
Sbjct: 580 IFYSAVAGMLLFRVHRVRVVMLTLGLGVIWLAVGYWPQERPLRLTFLSVGHGLAVLVE 637
>gi|311031603|ref|ZP_07709693.1| Late competence protein ComEC (membrane metal-binding protein and
hydrolase of the metallo-beta-lactamase superfamily)
[Bacillus sp. m3-13]
Length = 704
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/269 (12%), Positives = 85/269 (31%), Gaps = 36/269 (13%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
++ + KK L P F + +
Sbjct: 237 LMLLKKKVFSIDTIGLACIFILLLNPYYLYH-----IGFQ-----------------LSF 274
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
S + ++ + ++ L+ HF+ + + N++ +P
Sbjct: 275 SVSLSLLLASGILQKMQNGIAQLFI--VSMIAQVASLPLLLHHFYQFSFWSPLLNVIFVP 332
Query: 121 ILSFVVIPAGLIAILLMILSLDN--IPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPE 177
S V+P + ++ LS ++ + ++++ L+ + +A RI+ G+
Sbjct: 333 FYSLYVLPISFLLFFVLFLSPEHVTLIVPLLSYPLEYMNFLALRIAEIPLGTLVFGKPNP 392
Query: 178 TSFVTIVVEFLLMV-FCKTNIRHIGSIMIGITIIILF----TFPYSFSPDLLISEKGNLV 232
+ + + N R +G+I++ ++ + PY L I +G+ +
Sbjct: 393 ILMAAYCLAVVFFFYMWEINKRWLGTIVLLTGLVFQWNIDYVNPYGKVVVLDI-GQGDAI 451
Query: 233 ALVDK---NTLISNYSNPPSFIFSQWKSA 258
+ + + +F +WK
Sbjct: 452 YISLPFYKGDYLIDTGGAFTFPQEEWKER 480
>gi|167581347|ref|ZP_02374221.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis TXDOH]
Length = 495
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/221 (12%), Positives = 59/221 (26%), Gaps = 36/221 (16%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ P G + P PG F + ++AI + S +
Sbjct: 280 RSLAPSSVLAAALGCVLIVDPWAVTSPG-----FWLSFCAVAAILFASSGRSAAREARDL 334
Query: 66 NTWTWKKISSIKQS-----------------------------FLNEIRANIGTYGSASA 96
+ + ++ A + +
Sbjct: 335 DEARGSIDGACRERASPPACPARWRAACARARMRARRAIGRLVRRVRDAARAQFAVTIAL 394
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F IP+ G +AN AIP + +V P L ++L LD + + + +
Sbjct: 395 APLTALWFAQIPLTGPLANAFAIPWVGSLVTPIVLAGVVL-PAPLDAPAYVLGEALVAAL 453
Query: 157 IHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTN 196
+ + A + + + V + + +
Sbjct: 454 MRFLEAAAGAGRTVWMLPAPGGFALAMAAVGVVWALMPRGW 494
>gi|313499950|gb|ADR61316.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida BIRD-1]
Length = 657
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/272 (12%), Positives = 87/272 (31%), Gaps = 26/272 (9%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P PG F + ++ + Y +S + WT +
Sbjct: 236 FEPLAALLPG-----FWLSFAAVATLIYCFSA--RLGGWRPWQAWTRAQWVIAVGLLPVL 288
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLD 142
+ + + + +AN++A+P +S V+P L+ L++ L +
Sbjct: 289 LATGLP-----------------VSLSAPLANLVAVPWVSLAVLPLALLGTLMLPLAGVG 331
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIG 201
+ LD++ ++ + +P +++ + + LL++ + +R +G
Sbjct: 332 EALLWLAGGLLDVLFRGLALVAQQRPAWVPPALPLWAWLLVCLGALLILLPRGVPLRGLG 391
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALIT 261
+M+ + P+ + L + Y P+ S ++
Sbjct: 392 GVMLLALWVPREPVPFGQVEVWQLDVGQGLAVFLRTRHHSLLYDAGPARGESDLGERVVL 451
Query: 262 PFHEAPHVQKEDLQEKNQSSLKEILRSMQPRK 293
P V D+ + + + ++
Sbjct: 452 PTLRKLGVGGLDVMVISHAHADHSGGAGAIQR 483
>gi|90413110|ref|ZP_01221107.1| hypothetical Rec2-related protein [Photobacterium profundum 3TCK]
gi|90325953|gb|EAS42399.1| hypothetical Rec2-related protein [Photobacterium profundum 3TCK]
Length = 819
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/201 (10%), Positives = 56/201 (27%), Gaps = 16/201 (7%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
++ + K+ + I + P + F + + +
Sbjct: 317 LIRLRIKWPGWKIFIAALAICLMLNPLA-----SYAAGFWMSFTAVLILYLANLGGVRRQ 371
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
++ + + ++ A + F I + N +++P
Sbjct: 372 HTDQTENKIDYQKDQLWDKM--KVLAQLQFVLLLFMLPLQWYWFGGISLLAPFINFVSVP 429
Query: 121 ILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPET 178
+S + +P L AI + L N+ + W L +I +A + + +
Sbjct: 430 WVSTLTVPLVLAAIATVWFPWLSNVFWQFADWTLYPVIWLAEQSVGTW------LSLSSA 483
Query: 179 SFVTIVVEFLLMVF-CKTNIR 198
++ + R
Sbjct: 484 WLPFLIGGMAWAALGWFVSWR 504
>gi|312869044|ref|ZP_07729221.1| DNA internalization competence protein ComEC/Rec2-like protein
[Lactobacillus oris PB013-T2-3]
gi|311095470|gb|EFQ53737.1| DNA internalization competence protein ComEC/Rec2-like protein
[Lactobacillus oris PB013-T2-3]
Length = 720
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/219 (13%), Positives = 75/219 (34%), Gaps = 13/219 (5%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKK-ISSIKQSFLNEIRANIGTYGSASASIFLIKH 103
IS I P ++++ ++ + + R + S A +
Sbjct: 273 AISLIAGLLWNPYLLFNLGGQLSYLLSLILQVLTGEEGELKRCWLLGLLSLPAILSRTFE 332
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAH 161
FH + L+A+ + IP+ S +V P + + + L + ++ G I++
Sbjct: 333 FHLLS---LVASYVMIPLFSLLVFPLVVFSAMAYHFFPVLGELVNALL-SGFQIVLF--- 385
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
++ E G+ P + + + L ++ R++ ++ + + +P
Sbjct: 386 WLASLPGEIHFGKPPLCFALVLFLATLWLLQRPRRARYLVLFLLYLCCFLQIHYPPFGEV 445
Query: 222 DLLISEKGNLVALVDK---NTLISNYSNPPSFIFSQWKS 257
+G+ + + L+ + F +W
Sbjct: 446 IFTDIGQGDSIIIRTPFNRQVLLIDTGGKVQFNQPRWAQ 484
>gi|150008325|ref|YP_001303068.1| competence protein [Parabacteroides distasonis ATCC 8503]
gi|298375097|ref|ZP_06985054.1| ComEC/Rec2-related protein [Bacteroides sp. 3_1_19]
gi|149936749|gb|ABR43446.1| competence protein [Parabacteroides distasonis ATCC 8503]
gi|298267597|gb|EFI09253.1| ComEC/Rec2-related protein [Bacteroides sp. 3_1_19]
Length = 428
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 47/168 (27%), Gaps = 19/168 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKM-IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD F Y + I + K I W+ I +
Sbjct: 248 LFDVGFQLSYLAVFFILFLVPRFKEWIVVRNPLLAMPWEWI-------------TVSIAA 294
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL--IAILLMILSLDNIPFGVMA 150
++ +F L N+ + +L+ +IP + + D I V
Sbjct: 295 QIGTALLCFYYFGQFSTVFLFTNL-PVTLLAMFLIPFAFLWLGYPVDFYGYDWIQKIVEG 353
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ ++ + SV GR FL++ IR
Sbjct: 354 L-VHGMVRVVDVFSVMPYATITGRFSFFEM-LGGYGFLVLCLIYMKIR 399
>gi|229075999|ref|ZP_04208972.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock4-18]
gi|228707111|gb|EEL59311.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock4-18]
Length = 715
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 37/149 (24%)
Query: 1 MLSITKKYDPFPAETTIEGI---------ARLSPPSGPAFPGL----------FDFNFSS 41
+ I P +I G+ RLS + + F+ F
Sbjct: 212 VYMIIAGASPSVIRASITGVLLLVAFICSVRLSSLDALSITAICMLIYDPYLVFNIGFQF 271
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + S P ++ S I+ + I + + ++ L+
Sbjct: 272 SF--VGSFALILSAPILLRRSNG----------VIRNAIYISIISQL------VSTPILL 313
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAG 130
HF Y + N + +P LS +V+P
Sbjct: 314 YHFGYFSPYSIFLNFIYVPFLSIIVLPCS 342
>gi|255015479|ref|ZP_05287605.1| competence protein [Bacteroides sp. 2_1_7]
Length = 428
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 47/168 (27%), Gaps = 19/168 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKM-IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD F Y + I + K I W+ I +
Sbjct: 248 LFDVGFQLSYLAVFFILFLVPRFKEWIVVRNPLLAMPWEWI-------------TVSIAA 294
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL--IAILLMILSLDNIPFGVMA 150
++ +F L N+ + +L+ +IP + + D I V
Sbjct: 295 QIGTALLCFYYFGQFSTVFLFTNL-PVTLLAMFLIPFAFLWLGYPVDFYGYDWIQKIVEG 353
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ ++ + SV GR FL++ IR
Sbjct: 354 L-VHGMVRVVDVFSVMPYATITGRFSFFEM-LGGYGFLVLCLIYMKIR 399
>gi|119478442|ref|ZP_01618427.1| DNA internalization-related competence protein ComEC/Rec2 [marine
gamma proteobacterium HTCC2143]
gi|119448528|gb|EAW29775.1| DNA internalization-related competence protein ComEC/Rec2 [marine
gamma proteobacterium HTCC2143]
Length = 790
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/360 (13%), Positives = 100/360 (27%), Gaps = 47/360 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ P + + P +F + + FYS +
Sbjct: 319 RRHLAPNAGFAIALCVCLIVDPLAVLS-----LSFWLSFSAV--FIIFYSATGRLGQGGG 371
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ W I + L + AN+L +P+ SF
Sbjct: 372 VSRWLL-----------------IQLWIFIGLLPVLAILLGRASLIAPFANLLLVPLFSF 414
Query: 125 VVIPAGLIAILLMILSLDNIP--FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV- 181
+++P LI +L + D + + G III + I +P+ +
Sbjct: 415 ILVPLNLITGILALYDSDTAAQMWSWLDSGFAIIILYLEWLISI-GSQAIIVVPQRPLLI 473
Query: 182 --TIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
VV +++ K + +G I++ + P L L
Sbjct: 474 RALAVVGAFVLLLPKGMPFKWMGVILLLPLFMY--------RPPQLAEGDMKFTVLDVGQ 525
Query: 239 TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIK 298
L + + + F A V LQ+ S + ++ S
Sbjct: 526 GLATVVQTRNYTLVYDVGARWGDDFDMAQAVLIPYLQDHGISHIDSLVISHGDN-----D 580
Query: 299 KSFCVGCHRSDVIVG---VLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQ 355
+ + + + V + + + ++ Q +DI + + + + Q
Sbjct: 581 HAGSLPSLLAGMSVAELYLGEPLESLKADRQTADIYNGAVALQKSCVGGTAWRRDKITFQ 640
Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 78/242 (32%), Gaps = 7/242 (2%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP---KMIYSSESHNTWTW 70
T + + +L P G A PG FD+ +GI +GY S P + + + + W
Sbjct: 140 GQTWQLLVKLKRPHGMANPGGFDYQTWLIQQGIGGVGYVRSHPNNQLIFDNPSNLHRLRW 199
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
++ S + + + + K + +++ I L ++
Sbjct: 200 NISETMDSSIGHLRFSALLKALLIGDKRGIDKSQWELFAATGTTHLMVISGLHIGLVSG- 258
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
L + L I L + +A ++ ++ +P + ++V +L
Sbjct: 259 --FTFLFVRFLAAIAVPYCRAELWAAL-VAMICALTYSLAAGFTLPTQRALIMIVVLMLS 315
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
V + ++ I + + ++ S +S + + +
Sbjct: 316 VIFRRHLAPNAGFAIALCVCLIVDPLAVLSLSFWLSFSAVFIIFYSATGRLGQGGGVSRW 375
Query: 251 IF 252
+
Sbjct: 376 LL 377
>gi|242242865|ref|ZP_04797310.1| competence protein ComEC [Staphylococcus epidermidis W23144]
gi|242233678|gb|EES35990.1| competence protein ComEC [Staphylococcus epidermidis W23144]
Length = 706
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 2/137 (1%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ + P I L P + +F + + I
Sbjct: 213 IYAVYTGFVPSAMRAISIAIIILMLPIHFRKSSIHVLSFIFVLMIVLNPQFINHIGFQFS 272
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
S K S I + I + + HF+ GL++N + +P
Sbjct: 273 FLISLFIILTK--SYISGLKPLKCLFIISFLAQLGSIVINTYHFNQFQWIGLLSNFIFVP 330
Query: 121 ILSFVVIPAGLIAILLM 137
SF++ P+ +I +L+
Sbjct: 331 FYSFILFPSVIIYFILI 347
>gi|126662450|ref|ZP_01733449.1| competence protein [Flavobacteria bacterium BAL38]
gi|126625829|gb|EAZ96518.1| competence protein [Flavobacteria bacterium BAL38]
Length = 646
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 28/184 (15%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A + L P+ +FD F Y + +I F K Y +E+
Sbjct: 308 ALAISAFLILLVKPNA-----IFDIGFQLSYAAVLSIVLFQPFYKKFYFTENKIG----- 357
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+ + +F+ +P+ L+AN++ IP+ + V++ +I
Sbjct: 358 -------IYLTDIVLVSLAAQIGVLPLSLYYFNQLPLLFLLANLVIIPLSTAVLVGGIII 410
Query: 133 AI-------LLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ ++L L +I +M D I IA S S ++
Sbjct: 411 LLFNFVIPDFAILLGKLLSIIIHLMN---DYIHWIAKFKSGIITNISFTGWLTFSLYLVI 467
Query: 185 VEFL 188
+ F+
Sbjct: 468 IAFI 471
>gi|59713606|ref|YP_206381.1| putative recombination protein [Vibrio fischeri ES114]
gi|59481854|gb|AAW87493.1| putative recombination protein [Vibrio fischeri ES114]
Length = 767
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 13/128 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + +S + + I + I + KK++ + I
Sbjct: 342 MSFWLSFCAVSVVLFSLYIYQKIGTD--KLNGRVKKVTQVVF---------IQFGLFTLL 390
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL--DNIPFGVMAWGLD 154
+ F I N++A+P +S +P L+A+ +LSL + + L
Sbjct: 391 TPIQGYFFSGISYLSPFINLIAVPWVSLFTVPLSLVAVAFDMLSLPISSWFWKGANGSLK 450
Query: 155 IIIHIAHR 162
I +A +
Sbjct: 451 PIWWLAKQ 458
>gi|197337439|ref|YP_002158021.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
fischeri MJ11]
gi|197314691|gb|ACH64140.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
fischeri MJ11]
Length = 711
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 63/204 (30%), Gaps = 16/204 (7%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + +S + + I + I + KK++ + I
Sbjct: 286 MSFWLSFCAVSVVLFSLYIYQKIGTDN--LNGRAKKVTQVVF---------IQFGLFTLL 334
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL--DNIPFGVMAWGLD 154
F I N++A+P +S +P L+ + +LSL + + L
Sbjct: 335 IPIQGYFFSGISYLSPFINLIAVPWVSLFTVPLSLVGVASDMLSLPISSWFWNGANGSLK 394
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
I +A + + + + ++ L++ + + I +T
Sbjct: 395 PIWWLAKQAED---SWLLLPTVFNQVIIFILIVLMLKLFMPLKALVNPLFILLTCAAFIR 451
Query: 215 FPYSFSPDLLISEKGNLVALVDKN 238
+ D L G V + +
Sbjct: 452 PDKKWQVDFLDVGHGLAVLIEVND 475
>gi|331019172|gb|EGH99228.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 734
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 25/176 (14%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S +W S ++
Sbjct: 310 VLIVEPLVTLQPG-----FWLSFAVVGILVLIF----------SGRLGSWSWWQSWTRAQ 354
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P LI LL+ +
Sbjct: 355 WLIAIGLLPILLALNLP---------ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPVP 405
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + L + ++ A + +P +++ ++ +++ K
Sbjct: 406 VVGEGLLWLAGGALQWLFVFLGWVAEALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 461
Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 79/253 (31%), Gaps = 16/253 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ +L P G P FD+ + I A G ++ + + ++
Sbjct: 119 SGERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQR 178
Query: 73 ISSI--KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ ++ + +G S+ + + ++L I ++
Sbjct: 179 LLAVDAQGREGGLAALVLGDGSGLSSGDW------QVLQDTGTVHLLVISGQHIGLLAGV 232
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ A++ L A I+ G ++V +L
Sbjct: 233 IYALVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVL- 288
Query: 191 VFCKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+ RH+G + +I +++ + P +S + ++ + + ++S
Sbjct: 289 -LWRLRFRHLGVVWPFLISFNAVLIVEPLVTLQPGFWLSFAVVGILVLIFSGRLGSWSWW 347
Query: 248 PSFIFSQWKSALI 260
S+ +QW A+
Sbjct: 348 QSWTRAQWLIAIG 360
>gi|262375596|ref|ZP_06068829.1| predicted protein [Acinetobacter lwoffii SH145]
gi|262309850|gb|EEY90980.1| predicted protein [Acinetobacter lwoffii SH145]
Length = 820
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 72/220 (32%), Gaps = 20/220 (9%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F Y + Y + + + F ++ +
Sbjct: 378 AFWLSYGACFVLLRIYQTIQQQPNQTIQTALQ-------RLYFAMKVLVESQWKIFLALF 430
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDI 155
++ F + ++N++AIP + +++P ++A LL +S L ++ F + + +
Sbjct: 431 PLMMLFFKQVAWITPLSNLVAIPWIGLLIVPVDILAALLFFISEPLSSLLFQLNDIFIHM 490
Query: 156 IIHIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKT----NIRHIGSIMIGITII 210
++ + + + + ++ L++ + + I + + I +
Sbjct: 491 LLAFLNLLDRLFAPQLIPVAMNVWMIALCILGLLIVFLPRGLVPKSWTAIACVPLCIPQL 550
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ L + + G A+ ++ S + +
Sbjct: 551 ------NQHAFQLSVLDVGQGQAIFIRDGQHSMMIDMGGY 584
>gi|169334726|ref|ZP_02861919.1| hypothetical protein ANASTE_01132 [Anaerofustis stercorihominis DSM
17244]
gi|169257464|gb|EDS71430.1| hypothetical protein ANASTE_01132 [Anaerofustis stercorihominis DSM
17244]
Length = 512
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 15/184 (8%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
DPF I I L P +F +F + + I + +
Sbjct: 330 DPFNHTFIIASILLLINPL-----SIFHVSFQLSFSAVMGIFLLSPVMR-----NKLLDV 379
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+ + +K I T +I F + V ++ N++ +P ++ ++I
Sbjct: 380 FNEDNNIVKYFIE---LFCISTSAYLFTLPIIINTFGAMSVISILCNLIIVPFIAPIII- 435
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEF 187
GLI L I ++ L I + ++ +G +
Sbjct: 436 MGLIGGLSGRFVFGYIVLNLLDMILTFIRRLVKILASVPFASVSVGHLNIVVLFLYYTLL 495
Query: 188 LLMV 191
L+
Sbjct: 496 LIFA 499
>gi|189463827|ref|ZP_03012612.1| hypothetical protein BACINT_00160 [Bacteroides intestinalis DSM
17393]
gi|189438777|gb|EDV07762.1| hypothetical protein BACINT_00160 [Bacteroides intestinalis DSM
17393]
Length = 700
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 37/108 (34%), Gaps = 13/108 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + +++I + + ++ I +
Sbjct: 358 LFDVGFQLSFVAVASILLIQPKLYNL------LSVRYRIPRYIWG------LLTVSIAAQ 405
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL 141
+ +I +F + L+ N+ IP+++ ++ + + ++L
Sbjct: 406 IGTAPLVILYFSRFSTHFLLTNLWVIPMVTLILY-SAVFMLILTPFPF 452
>gi|332971012|gb|EGK09984.1| hypothetical protein HMPREF9373_2017 [Psychrobacter sp. 1501(2011)]
Length = 1044
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW---TWKKISSIKQSFLNEI--RANI 88
L+ F + ++ + + + ++ + S+ + +
Sbjct: 528 LWQAGFWLSFVAVAVLVAYSQRWERKQDTKQSSQVSQAFVSPTLSLTGRLGQQSSDLLKL 587
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ S + + F + ++G N+ AI + ++++P L+A +L ++
Sbjct: 588 QLWMSIALLPISLWLFGKVSLWGFAVNLFAIGLFGWIIVPLNLLASVLFVIF 639
>gi|299783043|gb|ADJ41041.1| Competence protein [Lactobacillus fermentum CECT 5716]
Length = 745
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 22/223 (9%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
IS + P ++ S ++ + + + + S + + F
Sbjct: 308 AISLLIQTLISPSILLSMGGQLSYLLSFCLTWFEQPSGLKQTLRLSLVSLPPLLHSVYQF 367
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFG---VMAWGLDIIIHI 159
H + L+ N L IP S +++P + +L L L + + GL +
Sbjct: 368 HSLS---LVINYLMIPFFSLIIMPLAIGGGILYPLFPGLGAVVNAGLILFHRGLAAL--- 421
Query: 160 AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC--KTNIRHIGSIMIGITIIILFTFPY 217
+ G++P V + + L MV + ++ + + +T + L
Sbjct: 422 ----ANLPGTITFGKVPAW--VAVSLVLLTMVTWEKRGAVKWL-VLGYVVTFVWLHFPLQ 474
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPS--FIFSQWKSA 258
+ I + ++ N + F WK
Sbjct: 475 GEVTFVDIGQGDCIIIREPFNRRVMMIDTGGKLNFQTEGWKKR 517
>gi|212638666|ref|YP_002315186.1| Late competence protein ComEC [Anoxybacillus flavithermus WK1]
gi|212560146|gb|ACJ33201.1| Late competence protein ComEC (membrane metal-binding protein and
hydrolase of the metallo-beta-lactamase superfamily)
[Anoxybacillus flavithermus WK1]
Length = 697
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 45/272 (16%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ A + + P G F +F + I + + ++
Sbjct: 234 LLFSSRFRTIDALSIACLLLLGKDPYTVFHLG-FQLSFLVCFALIICSSFIQNERSVVRQ 292
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S L+ HF+ + + + NI+ +P+
Sbjct: 293 -----------------------LFMTSFIAQISTLPLLLYHFYEVSLLSIPLNIIFVPL 329
Query: 122 LSFVVIPAGLIAI---LLMILSLDNIPFGV---MAWGLDIIIHIAHRISVAHNEFCIGRI 175
SF+++P +A+ L M I + + + +++ ++ +GR
Sbjct: 330 YSFIILPLCFVALLSHLFMPFVSSLIIYVLKVVLEHTNALVLSLSDMF-----VLTLGRP 384
Query: 176 PETSFVTIVVEFLLMVF---CKTNI---RHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
P V +V L K R ++ +I F P L + +G
Sbjct: 385 PLLLLVAYIVSVFLFFLSFESKKRAVMFRFSFLFVMIAHVIWPFFRPTGEVVMLDV-GQG 443
Query: 230 NLVALVDKNTLIS---NYSNPPSFIFSQWKSA 258
+ + + + SF WK
Sbjct: 444 DSIYIELPYRKAVYMIDTGGTMSFTDEHWKKR 475
>gi|304409785|ref|ZP_07391405.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS183]
gi|307304142|ref|ZP_07583895.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica BA175]
gi|304352303|gb|EFM16701.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS183]
gi|306913040|gb|EFN43463.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica BA175]
Length = 716
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/347 (14%), Positives = 100/347 (28%), Gaps = 47/347 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + I L P G F + + I + I ++ S
Sbjct: 229 KRFSTAWERLLFALFIVLLLDPLACLSAG-----FWLSFCALGIILFTLEIQPRAFTPGS 283
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + ++ + + F + V+ L NILA+P SF
Sbjct: 284 T------RSARLRTGMMQFWAIQWRLSLGLGLLQAAL--FGGVSVHSLWMNILAVPWFSF 335
Query: 125 VVIPAGLIAILLM----ILSLDNIPFGVMA------WGLDI---IIHIAHRISVAHNEFC 171
VVIP + + L L + + W L ++ I+ ++S H
Sbjct: 336 VVIPLAMAGFVCWWLGTALGLSHFGLSSLGVLRLSDWSLSPYAQLLDISQQLSA-HWLAL 394
Query: 172 IGRIPETSFVTIVVEFLL--------MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
+ F +V L + + + + I + + L++ + +
Sbjct: 395 SDSLLALGFCALVGGVLWRYVPKHKNYIAWLSLLSLL-FIPALLFCMTLWSPVQTHRWTM 453
Query: 224 LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + G + +V + N FI+ +A F A V L+ K +
Sbjct: 454 HLLDVGQGLTVVIE-------KNGRGFIYDT-GAAFGDDFSYAERVILPFLKAKGIQEID 505
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDI 330
I+ S V + + C+ I
Sbjct: 506 YIVISHSDNDHA---GGAPVLMEAYPKALVITDVAGFSGQDCRPRQI 549
>gi|256839388|ref|ZP_05544897.1| competence protein [Parabacteroides sp. D13]
gi|256738318|gb|EEU51643.1| competence protein [Parabacteroides sp. D13]
Length = 428
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 47/168 (27%), Gaps = 19/168 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKM-IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD F Y + I + K I W+ I +
Sbjct: 248 LFDVGFQLSYLAVFFILFLVPRFKEWIVVRNPLLAMPWEWI-------------TVSIAA 294
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL--IAILLMILSLDNIPFGVMA 150
++ +F L N+ + +L+ +IP + + D I V
Sbjct: 295 QIGTALLCFYYFGQFSTVFLFTNL-PVTLLAMFLIPFAFLWLGYPVDFYGYDWIQKIVEG 353
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ ++ + SV GR FL++ IR
Sbjct: 354 L-VHGMVRVVDVFSVMPYATITGRFSFFEM-LGGYGFLVLCLIYMKIR 399
>gi|89895893|ref|YP_519380.1| hypothetical protein DSY3147 [Desulfitobacterium hafniense Y51]
gi|89335341|dbj|BAE84936.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 836
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 68/200 (34%), Gaps = 20/200 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + I ++ + +W SIK +F A+
Sbjct: 310 DIGFQLSFMATWGIL-------VLSADLEKMSWVRDWPKSIKNAFSMTCA------AQAA 356
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+I FH + + G++AN+LA+ +L + G++A+ L + I + L +
Sbjct: 357 TLPLMISAFHRLSIIGVLANLLALFVLGSI-FELGILAVFLSFIP--QIALPLFQVSLWL 413
Query: 156 IIHIAHR---ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ ++ ++ P F + +V + I +G+ +
Sbjct: 414 LTGVSEFLMQLARIPWADVWVVNPGPLFWVYWYGW-FLVLLVGKEKVGFMIRMGLGNLYR 472
Query: 213 FTFPYSFSPDLLISEKGNLV 232
P+ +L+ G +
Sbjct: 473 VGQPWIARGVVLMRPLGAAL 492
>gi|312883538|ref|ZP_07743263.1| hypothetical protein VIBC2010_12004 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368761|gb|EFP96288.1| hypothetical protein VIBC2010_12004 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 695
Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 91/237 (38%), Gaps = 31/237 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I + P+ T+ I P P L I+ I + Y
Sbjct: 252 IGRMSGPYKFLLTLS-IIMAIYPFSVVSPSL-----WMSVGAIAVI-FLYQ--------- 295
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ T KK +K +F + + + ++ FH I + L NIL +P S
Sbjct: 296 ---SMTEKKSHWLKSAF------CMQMFIFVFMAPIVVLFFHGISTFSLFLNILFVPWFS 346
Query: 124 FVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
FVVIP +A L + ++ I + + LD++I++ + + + IP F+
Sbjct: 347 FVVIPLNFLAFLTLSFGKVNQILWSSVDASLDLVIYVLNHLPQGWWDIDSELIPYFFFLP 406
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+VV ++F K + +G + I L + S L + + G+ +A+V
Sbjct: 407 LVV-MCSLIFSKKTLGLLGITI----IFSLRNWHTPPSWQLNVLDVGHGLAIVIIQG 458
>gi|329903717|ref|ZP_08273593.1| putative DNA internalization-competence-like protein ComEC/Rec2
[Oxalobacteraceae bacterium IMCC9480]
gi|327548238|gb|EGF32937.1| putative DNA internalization-competence-like protein ComEC/Rec2
[Oxalobacteraceae bacterium IMCC9480]
Length = 478
Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 11/139 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ L P PG F + ++ I Y ++
Sbjct: 349 SSVLCIALAVVLLLDPWAVLAPG-----FWLSFGAVAVILYASVGRMPPAPLPPTSSRWQ 403
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ +++ S + F + + +AN +AIP++SFVV P
Sbjct: 404 RWRATLAP------ATRTQYVVSIGLVPLTLLLFGQVSLISPLANAVAIPLVSFVVTPLA 457
Query: 131 LIAILLMILSLDNIPFGVM 149
L+ + + M
Sbjct: 458 LLGSVAPAPLNGGCCWRGM 476
>gi|194336706|ref|YP_002018500.1| ComEC/Rec2-related protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194309183|gb|ACF43883.1| ComEC/Rec2-related protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 747
Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 71/233 (30%), Gaps = 18/233 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+I +K P + + + L P PG F + AI P +I S
Sbjct: 349 TIGRKSYPVNSLAVADFLILLFDPFDLLNPG-----FLMTNGAVLAIL--LISPHLIASP 401
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + + L+ + + S + +F V ++ANI +
Sbjct: 402 QKEGGL----LRGVAHFLLSSV--MVTLAAIIGVSPVIAYYFGTFSVISILANIPVVLFS 455
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIGRIPE--TS 179
+ ++ + ++ ++ F ++ L ++ + A S R
Sbjct: 456 TLLMYALVPMLLVNLVSGYVASFFAATSFFLAELTLRTALYFSQFPFASITIRPDAIEVW 515
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+ LL+ + + ++ ++ + P ++ V
Sbjct: 516 LYYATLAALLVFSVQRAWGRVAISLLLGLNLLFWYSFALRIPP--VAPDMVTV 566
>gi|253990296|ref|YP_003041652.1| hypothetical protein PAU_02820 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781746|emb|CAQ84909.1| hypothetical membrane protein ycai [Photorhabdus asymbiotica]
Length = 787
Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 76/250 (30%), Gaps = 35/250 (14%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P+ I L P +F + + A+ +++ W
Sbjct: 339 PWQWALWTAAIILLFDPLTVLS-----DSFWLSFFAVMALMFWF--FWAPLGEPFRYGWK 391
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
W + + + FH + L AN A+PI+SF+ +P
Sbjct: 392 WLWLRGLYMQMGMMLMLIPLQLLL----------FHGVNFSALFANFWAVPIISFITVPL 441
Query: 130 GLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI---PETSFVTIV 184
++A++ + + + ++ + + S+ +
Sbjct: 442 IMLALISTFCPF-IHTLLWQLVDYSVT--------FSLIPLPVLQQSWSETGSFPILITF 492
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL----ISEKGNLVALVDKNTL 240
+ + +++ + ++IGI++ ++ + L + L +++KN
Sbjct: 493 IGWFVVIVWRFAWWQSYKLLIGISLGVMLCYLRRNEEYLWRFSMLDVGHGLAVIIEKNGK 552
Query: 241 ISNYSNPPSF 250
+ +
Sbjct: 553 ALIFDTGNRW 562
>gi|184155086|ref|YP_001843426.1| competence protein [Lactobacillus fermentum IFO 3956]
gi|183226430|dbj|BAG26946.1| competence protein [Lactobacillus fermentum IFO 3956]
Length = 745
Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 22/223 (9%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
IS + P ++ S ++ + + + + S + + F
Sbjct: 308 AISLLIQTLISPSILLSMGGQLSYLLSFCLTWFEQPSGLKQTLCLSLVSLPPLLHSVYQF 367
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFG---VMAWGLDIIIHI 159
H + L+ N L IP S +++P + +L L L + + GL +
Sbjct: 368 HLLS---LVINYLMIPFFSLIIMPLAIGGGILYPLFPGLGAVVNAGLILFHRGLAAL--- 421
Query: 160 AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC--KTNIRHIGSIMIGITIIILFTFPY 217
+ G++P V + + L MV + ++ + + +T + L
Sbjct: 422 ----ANLPGTITFGKVPAW--VAVSLVLLTMVTWEKRGAVKWL-VLGYVVTFVWLHFPLQ 474
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPS--FIFSQWKSA 258
+ I + ++ N + F WK
Sbjct: 475 GEVTFVDIGQGDCIIIREPFNRRVMMIDTGGKLNFQTEGWKKR 517
>gi|262384557|ref|ZP_06077691.1| competence protein [Bacteroides sp. 2_1_33B]
gi|262293850|gb|EEY81784.1| competence protein [Bacteroides sp. 2_1_33B]
Length = 428
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 47/168 (27%), Gaps = 19/168 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKM-IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD F Y + I + K I W+ I +
Sbjct: 248 LFDVGFQLSYLAVFFILFLVPRFKEWIVVRNPLLAMPWEWI-------------TVSIAA 294
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL--IAILLMILSLDNIPFGVMA 150
++ +F L N+ + +L+ +IP + + D I V
Sbjct: 295 QIGTALLCFYYFGQFSTVFLFTNL-PVTLLAMFLIPFAFLWLGYPVDFCGYDWIQKIVEG 353
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ ++ + SV GR FL++ IR
Sbjct: 354 L-VHGMVRVVDVFSVMPYATITGRFSFFEM-LGGYGFLVLCLIYMKIR 399
>gi|254445045|ref|ZP_05058521.1| Competence protein [Verrucomicrobiae bacterium DG1235]
gi|198259353|gb|EDY83661.1| Competence protein [Verrucomicrobiae bacterium DG1235]
Length = 544
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 20/199 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF--------YSIPK 57
K+ P A I L P LF F Y +S+I +
Sbjct: 321 KQASPLNALVASALIYLLLLPGQ-----LFQAGFQMSYLTVSSILLLGLPLAKSLNRLLP 375
Query: 58 MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
+ TW++ + + + S+++ I +F +P YG++ N++
Sbjct: 376 LFPHIPHAIQTTWQRWLCVSKR-WLLDATGVSIAAFLSSALLGIYYFQILPTYGILINLV 434
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH----RISVAHN-EFCI 172
A+PI S ++ AG +++LL L+ + ++I + H S
Sbjct: 435 ALPIASLAIV-AGFLSLLLSPLNTILPISELFNNAALVLIKLIHLTLEFTSTLPASSIAT 493
Query: 173 GRIPETSFVTIVVEFLLMV 191
IP + T ++ L +V
Sbjct: 494 APIPASLAATAILSSLALV 512
>gi|332162204|ref|YP_004298781.1| hypothetical protein YE105_C2582 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666434|gb|ADZ43078.1| hypothetical protein YE105_C2582 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 761
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 80/242 (33%), Gaps = 24/242 (9%)
Query: 38 NFSSYYKGISAIG-YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + ++ +FY +P + + L + I
Sbjct: 333 SFWLSCLAVFSLICWFYWVPFAPCFRTGWQGLVIRGLHLQLGMMLLLMPLQIVL------ 386
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDI 155
FH I + + AN+ A+P++S + +P L+A++ +L L + + + L
Sbjct: 387 -------FHGISLLSIPANLWAVPLVSLITVPCVLLALVFTLLPLVAGMFWSLADLSLTA 439
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFT 214
++ + ++ S +L M+ + + R+ ++ + + ++
Sbjct: 440 VL-----LPLSPMRIGWFYTGSASVAIGFGGWLAMLIWRFSWWRNYSIGVMVLCVNLVLF 494
Query: 215 FPYSFSPDLLI---SEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ L ++++ + + S S +I P+ +
Sbjct: 495 TQRRDEYQWRVDMLDIGHGLAVVIEREGKAIIFDTGNRWGTSSMASKVILPYLRWRGITI 554
Query: 272 ED 273
E
Sbjct: 555 EQ 556
>gi|300774231|ref|ZP_07084098.1| possible competence protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300758910|gb|EFK55739.1| possible competence protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 692
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 46/163 (28%), Gaps = 24/163 (14%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F Y + I + +Y + K + + I
Sbjct: 359 DLGFQLSYLAVLGIVTVLPLLNKLYLPKG------KYLKIFMEYMYISIA------AQLF 406
Query: 96 ASIFLIKHFHCIPVYGLIANI-LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ +F P Y LIAN+ +A+P + + ++L LD + M L+
Sbjct: 407 TLPLVFYYFGQFPNYFLIANLFIALPSTCMMYV-----GLVLAFFPLD-LLSQFMGKMLE 460
Query: 155 IIIHIA----HRISVAHNEFCIG-RIPETSFVTIVVEFLLMVF 192
+I + G + + + +
Sbjct: 461 WLIQFMWEGLRILDCLPGSLIQGVVFSIDQVILLFLACFFLSI 503
>gi|310643092|ref|YP_003947850.1| DNA internalization-like competence protein comec/rec2
[Paenibacillus polymyxa SC2]
gi|309248042|gb|ADO57609.1| DNA internalization-like competence protein ComEC/Rec2
[Paenibacillus polymyxa SC2]
Length = 848
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/188 (12%), Positives = 56/188 (29%), Gaps = 24/188 (12%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
A L P + L +F + + + + K ++
Sbjct: 301 ALLMLLWNPYY--LLSVSFQLSFLVTGGLLIYMPLMKPFFAKWPLLIGGE---------- 348
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI-LLMIL 139
I + + +F+ + AN + +P+++++V+P G +A+ + +
Sbjct: 349 -----VAITVTAQLVSFPMTVFYFNQFSLLSFAANFVLVPLITYIVLPLGTVAMGMAFLW 403
Query: 140 SLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL-----LMVFC 193
I D+ + ++V I +V L +
Sbjct: 404 GDGARILAWPAEQLNDLTFWLVKWLNVDDAYVSIWPSSSILWVLAYYAALYSVLYWLKTW 463
Query: 194 KTNIRHIG 201
T+ R G
Sbjct: 464 LTSRRKTG 471
>gi|237800331|ref|ZP_04588792.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023188|gb|EGI03245.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 478
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 67/191 (35%), Gaps = 26/191 (13%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S W+ S ++
Sbjct: 310 VLIFEPLVTLQPG-----FWLSFAAVGILILIF----------SGRLGAWQWWQSWTRAQ 354
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P LI LL+ +
Sbjct: 355 WLIAIGLLPILLALNLP---------ISLSGPFANLLAVPWVSVIVLPLALIGTLLLPVP 405
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + L+ + ++ + +P +++ ++ +++ + +R
Sbjct: 406 VVGEGLLWLAGGALEWLFVFLGWVADVLPAWLPSAVPVWAWLISLLGAFVLLLPRGVPMR 465
Query: 199 HIGSIMIGITI 209
+G ++ + +
Sbjct: 466 PLGWPLLLLCV 476
>gi|50842381|ref|YP_055608.1| putative ComE operon protein 3 [Propionibacterium acnes KPA171202]
gi|50839983|gb|AAT82650.1| putative ComE operon protein 3 [Propionibacterium acnes KPA171202]
Length = 784
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 351 VGFWLSACATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 395
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 396 QPVITWMAGTVSTTGLVANLAAAPFVPPASALGMVTGLLAFIWPPLGTPFGRLAGWCVQP 455
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 456 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCVGLALITPTVLARPWLTALAGLAVIAAM 515
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 516 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 558
>gi|242373892|ref|ZP_04819466.1| competence protein ComEC [Staphylococcus epidermidis M23864:W1]
gi|242348446|gb|EES40048.1| competence protein ComEC [Staphylococcus epidermidis M23864:W1]
Length = 740
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 2/135 (1%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ +I + P I + P L + I GY Y+I
Sbjct: 245 IYAIYTDFVPSAVRAISIAILVILLPKSLRKSSLNLLSLIFIIMYIVYPGYIYNIGFQFS 304
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ +K + I + I + HF+ G ++N+L +P
Sbjct: 305 FLICFFILMAQPF--LKNLTPIKSLLAITCIAQFGSIIISVYHFNQFQWIGFLSNLLFVP 362
Query: 121 ILSFVVIPAGLIAIL 135
SF++ P+ ++ +
Sbjct: 363 FYSFLLFPSIILFFI 377
>gi|257055304|ref|YP_003133136.1| DNA internalization-related competence protein ComEC/Rec2
[Saccharomonospora viridis DSM 43017]
gi|256585176|gb|ACU96309.1| DNA internalization-related competence protein ComEC/Rec2
[Saccharomonospora viridis DSM 43017]
Length = 837
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 74/277 (26%), Gaps = 31/277 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ PA + L P F+ + + +
Sbjct: 331 LVLGRRGSALPALAAAVCVLGLYDPDMAVS-----MGFTLSVVATAGLVLLAPLWSRALE 385
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ T + + + + V ++AN+ A P+
Sbjct: 386 RRGVPG-------------GIADALAVPTVAFFATAPVIAGMVGEVSVVSIVANLAAAPV 432
Query: 122 LSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++ + + A L + I V+ + +I +A +
Sbjct: 433 VAPITVLGTAAAALAPLWPGAAEIVVQVVGPAVSWLILVARHAASVPGAVIPWPSGWWGG 492
Query: 181 VTIVVEFLLM-VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL------LIS-----EK 228
V+ V +L+ + + + I + +P L++
Sbjct: 493 VSAVFVIVLLWCGLRFRGVRLAVTLAVIGTTLFLVPTRVLAPVWPPNGWVLVACDVGQGD 552
Query: 229 GNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
G ++A +++ + + P F + L
Sbjct: 553 GLVLATGERDRAVVVDTGPDPAAFDRCLDRLGVNRIP 589
>gi|298490271|ref|YP_003720448.1| comEC/Rec2-like protein ['Nostoc azollae' 0708]
gi|298232189|gb|ADI63325.1| ComEC/Rec2-related protein ['Nostoc azollae' 0708]
Length = 792
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 80/256 (31%), Gaps = 24/256 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + A+ T +++ I + + I ++ +
Sbjct: 373 IWDLGFQLSFLATLALIV-------------TATPITQRLDWIPPAIASLI--SVPLAAT 417
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
L++ F + VY + +I+ ++S V I + + +++ +I+ L + + +
Sbjct: 418 IWTVPLLLQIFSVVAVYSVPLSIITTLLISIVSIGSMISSLVSLIVPDLGSTLASFLYYP 477
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVF---CKTNIRHIGSIMIGIT 208
+I + + +G I V I + + G I I +
Sbjct: 478 THWLIQLVDFSASLPGSSVAVGSISTEQMVVIYGLIISTCMVRWWQQRWWFAGLIAIVLV 537
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN----YSNPPSFIFSQWKSALITPFH 264
II ++ S L++ V ++ ++ F +
Sbjct: 538 IIPVWHSANSLLLITLLATDKEPVLVIQDKGQVTLINSGDEGTGRFTILPFLQQQGVNKI 597
Query: 265 EAPHVQKEDLQEKNQS 280
+ K E +
Sbjct: 598 DWAVSSKFLANESDAW 613
>gi|325856918|ref|ZP_08172416.1| ComEC/Rec2-like protein [Prevotella denticola CRIS 18C-A]
gi|325483291|gb|EGC86268.1| ComEC/Rec2-like protein [Prevotella denticola CRIS 18C-A]
Length = 514
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 54/173 (31%), Gaps = 17/173 (9%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD F + + +I FY + + T + + + +
Sbjct: 350 SLFDIGFQLSFVSVWSILLFYPLL--------YQTLSSRYLKHCAAGRWLWGMTAVSVAA 401
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + +F + +++A+P + ++I + + ++L +
Sbjct: 402 QLGTAPLIAFYFCRFSTVFIPGSLIAVPG-TMMIIWSSVFMLILSPFPA---LSSFLGQT 457
Query: 153 LDIIIH----IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
+ +++ H ++ IG + T V +LM G
Sbjct: 458 VGQLVYCQDTALHWLASFPWA-SIGNLHVTLLQLAVYYAMLMGVWLLWSFLAG 509
>gi|260663630|ref|ZP_05864519.1| DNA internalization competence protein ComEC/Rec2 [Lactobacillus
fermentum 28-3-CHN]
gi|260551856|gb|EEX24971.1| DNA internalization competence protein ComEC/Rec2 [Lactobacillus
fermentum 28-3-CHN]
Length = 745
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 22/223 (9%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
IS + P ++ S ++ + + + + S + + F
Sbjct: 308 AISLLIQTLISPSILLSMGGQLSYLLSFCLTWFEQPSGLKQTLRLSLVSLPPLLHSVYQF 367
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFG---VMAWGLDIIIHI 159
H + L+ N L IP S +++P + +L L L + + GL +
Sbjct: 368 HLLS---LVINYLMIPFFSLIIMPLAIGGGILYPLFPGLGAVVNAGLILFHRGLAAL--- 421
Query: 160 AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC--KTNIRHIGSIMIGITIIILFTFPY 217
+ G++P V + + L MV + ++ + + +T + L
Sbjct: 422 ----ANLPGTITFGKVPAW--VAVSLVLLTMVTWEKRGAVKWL-VLGYVVTFVWLHFPLQ 474
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPS--FIFSQWKSA 258
+ I + ++ N + F WK
Sbjct: 475 GEVTFVDIGQGDCIIIREPFNRRVMMIDTGGKLNFQTEGWKKR 517
>gi|299144178|ref|ZP_07037258.1| DNA internalization-related competence protein ComEC/Rec2
[Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518663|gb|EFI42402.1| DNA internalization-related competence protein ComEC/Rec2
[Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 762
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 29/158 (18%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
KY F A I L P P +F Y + I FY ++++
Sbjct: 283 KYTSFNALILSAMITILINPFSIYSP-----SFLLSYLSVLGIILFYKKFEILFQ----- 332
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
K F + + + I F V G I+N+ +P+ SF +
Sbjct: 333 ----------KNYFGKSLALTLSV--NIMLFQVSIYLFREFSVLGFISNVFLLPLYSFAI 380
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
I ++ +L+I ++A ++ I+++A ++
Sbjct: 381 I----LSYILIIF---KPLAFLIAPSINFILNVASFLA 411
>gi|225851540|ref|YP_002731774.1| competence protein [Persephonella marina EX-H1]
gi|225645315|gb|ACO03501.1| competence protein [Persephonella marina EX-H1]
Length = 577
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/179 (9%), Positives = 37/179 (20%), Gaps = 24/179 (13%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ I L P P +F + + I +
Sbjct: 293 VAFIVVLISPYSIFSP-----SFQLSFIAVFGILISLRYIVFEGKN-------------- 333
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL- 135
+ + I +I HF +I+ + + P +++
Sbjct: 334 RYWSVVYSAFMISLIAVLFTMPVVIYHFGKFSPVSVISTPAGM----IFLYPYLFFSVIN 389
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
L +M + I A S ++ +
Sbjct: 390 LFTFFSIEPFIYIMNISGKLFIKTAEIFDSFDLFSSGYSPSFLSVFLYTALLSALILVR 448
>gi|288928083|ref|ZP_06421930.1| ComEC/Rec2 family protein [Prevotella sp. oral taxon 317 str.
F0108]
gi|288330917|gb|EFC69501.1| ComEC/Rec2 family protein [Prevotella sp. oral taxon 317 str.
F0108]
Length = 471
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 62/203 (30%), Gaps = 27/203 (13%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
I L L+D +F + + +I Y +Y + + + +I
Sbjct: 291 ACIVMLIANPST----LWDVSFQLSFIAVLSIIVLYPPLFSLYQPTTRWANLLRPVWAIV 346
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ + +F Y L++N+L +P+++ ++ I+
Sbjct: 347 ---------CVSVAAQVGTMPIIAYYFGRFSCYFLLSNLLILPLITLLLYATLASFIVQG 397
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
L N+ M W + + + I+ + ++ L + +T +
Sbjct: 398 APLLHNLVLDAMQWLATAVQTLVNGIAALPHS--------------TLDGLQLNLIQTYL 443
Query: 198 RHIGSIMIGITIIILFTFPYSFS 220
+I + + +
Sbjct: 444 AYIFIAFLYAIGLFALKWFRIRR 466
>gi|73662479|ref|YP_301260.1| hypothetical protein SSP1170 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494994|dbj|BAE18315.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 693
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 52/148 (35%), Gaps = 28/148 (18%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ + L P G F F+F + I + I
Sbjct: 249 GVFILITLISPQLIYNIG-FQFSFFITFC----ILFALPI-------------------- 283
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+K + + + + S+SI HF+ I G++AN+ +P +F++ PA LI
Sbjct: 284 LKDANIVKSMIFVSVIAQLSSSIISAAHFNQIQWIGILANLFFVPFYTFILFPASLIYFA 343
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRI 163
+ + + L+I++ I
Sbjct: 344 SLHFPIK---VTIFTKCLNILLLIHDYF 368
>gi|237730876|ref|ZP_04561357.1| competence domain-containing protein [Citrobacter sp. 30_2]
gi|226906415|gb|EEH92333.1| competence domain-containing protein [Citrobacter sp. 30_2]
Length = 754
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/281 (10%), Positives = 91/281 (32%), Gaps = 35/281 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++A+ ++Y + S
Sbjct: 299 RQWSGWSVWICCLAAIVVVDPVAVLSQSL-----WLSASAVAALLFWYQWVPLPDWPLS- 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ A++ + I FH + +AN+ A+P+++FV
Sbjct: 353 -----------RAGRQFLALAHLQLGITLLLLPVQIAMFHGFSLTSFLANLFAVPLVTFV 401
Query: 126 VIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L +++ + +++ + + L ++ +
Sbjct: 402 SVPLILAGMIMHLAGTVMVESSLWYLADRSLALLFWGLR---SLPEGWINIDARWQWLAF 458
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIII---LFTFPYSFSPDLLISEKGNLVA-LVDK 237
+ ++++ + N +R + + + +++ L+ P + + + + G +A ++ +
Sbjct: 459 LP--GMMIIAWRLNILRTLPVVCFSVLLLLSGPLWRAPRTDVWQVHMLDVGQGLAMVIAR 516
Query: 238 NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKN 278
N Y W P ++ +L+ +
Sbjct: 517 NGKALLYDTG-----LAWPEGDSAQHLIIPWLRWHNLEPEG 552
>gi|260061702|ref|YP_003194782.1| putative competence related membrane protein [Robiginitalea
biformata HTCC2501]
gi|88785834|gb|EAR17003.1| putative competence related membrane protein [Robiginitalea
biformata HTCC2501]
Length = 663
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 62/213 (29%), Gaps = 19/213 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF F + + AI Y +Y S +KI + +
Sbjct: 338 LFQAGFQMSFLAVWAILSLYPW---LYRSWPVKRGAGRKIGQL---------LCVSGAAQ 385
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH P ++N+L IP++ V+ L+ L L +
Sbjct: 386 LGVLPLSLYYFHQFPALFWLSNLLLIPVMGVVLASGFLLLGLASYSPLPDWVAWGADRFF 445
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN---IRHI----GSIMIG 206
+ + + + + + + L+ + +R + ++
Sbjct: 446 GLFNGVVRWVGGQEGFLITEIPWDGVQLALSLAALVALGTWARSRDLRWLKRTGALLLAL 505
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ + + LI + AL+ +
Sbjct: 506 QVYSVGAGWHSGRQQEWLIPHRFGESALILRQG 538
>gi|314978349|gb|EFT22443.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL072PA2]
Length = 762
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 329 VGFWLSVCATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGTVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGMPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAM 493
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 494 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|332675294|gb|AEE72110.1| putative ComE operon protein 3 [Propionibacterium acnes 266]
Length = 764
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 331 VGFWLSVCATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 375
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 376 QPVITWMAGTVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGMPFGRLAGWCVQP 435
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 436 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAM 495
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 496 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 538
>gi|289427084|ref|ZP_06428800.1| ComEC/Rec2-like protein [Propionibacterium acnes J165]
gi|295130457|ref|YP_003581120.1| ComEC/Rec2-like protein [Propionibacterium acnes SK137]
gi|289159553|gb|EFD07741.1| ComEC/Rec2-like protein [Propionibacterium acnes J165]
gi|291375645|gb|ADD99499.1| ComEC/Rec2-like protein [Propionibacterium acnes SK137]
gi|313772362|gb|EFS38328.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL074PA1]
gi|313807373|gb|EFS45860.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL087PA2]
gi|313809882|gb|EFS47603.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL083PA1]
gi|313818421|gb|EFS56135.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL046PA2]
gi|313825063|gb|EFS62777.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL063PA1]
gi|313830795|gb|EFS68509.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL007PA1]
gi|313834013|gb|EFS71727.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL056PA1]
gi|314960143|gb|EFT04245.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL002PA2]
gi|314973220|gb|EFT17316.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL053PA1]
gi|314975892|gb|EFT19987.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL045PA1]
gi|314983640|gb|EFT27732.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL005PA1]
gi|314987588|gb|EFT31679.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL005PA2]
gi|314990073|gb|EFT34164.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL005PA3]
gi|315080790|gb|EFT52766.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL078PA1]
gi|315084459|gb|EFT56435.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL027PA2]
gi|315085799|gb|EFT57775.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL002PA3]
gi|315096129|gb|EFT68105.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL038PA1]
gi|327326048|gb|EGE67838.1| putative ComE operon protein 3 [Propionibacterium acnes HL096PA2]
gi|327332080|gb|EGE73817.1| putative ComE operon protein 3 [Propionibacterium acnes HL096PA3]
gi|327443285|gb|EGE89939.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL013PA2]
gi|327446069|gb|EGE92723.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL043PA2]
gi|327447949|gb|EGE94603.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL043PA1]
gi|328753611|gb|EGF67227.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL020PA1]
gi|328760451|gb|EGF74019.1| putative ComE operon protein 3 [Propionibacterium acnes HL099PA1]
Length = 762
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 329 VGFWLSVCATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGTVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGMPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAM 493
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 494 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|212635084|ref|YP_002311609.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
piezotolerans WP3]
gi|212556568|gb|ACJ29022.1| ComEC/Rec2-like protein:DNA internalization-like competence protein
ComEC/Rec2 [Shewanella piezotolerans WP3]
Length = 781
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/275 (14%), Positives = 84/275 (30%), Gaps = 32/275 (11%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-----------YFY 53
T+ + I L P P +F + + I +
Sbjct: 292 TRFSSSWERLLYALFIVLLIDPLSPLS-----ASFWLSFMALVVILVTISSCLPTPLIKH 346
Query: 54 SIPKMIYSSESHNTWTWKKISSIKQ-SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL 112
+++ + +T ++ I + + F + +
Sbjct: 347 PSEEVLEDIVAQTAFTSSYRFLLRAVQQWFIPFWAIQWRLALILGLLQASFFAGTSIISV 406
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIP-------FGVMAWGLDIIIHIAHRISV 165
N+L +P SFVVIP L++++L I+ L + F + L+ I + S
Sbjct: 407 AVNLLLVPWFSFVVIPLALLSLMLFIIGLGSGVEIDFTNIFWLANQTLEPAIFLLDNASK 466
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH---IGSIMIGITIIILFTFPYSFSPD 222
+ + + + L NI G +++ + I+I + +
Sbjct: 467 VSFAWLNLSNQWIAVLLSAMAGLWFFRQFRNIYWRITFGVMLLPMIILIFQKYVNEQNQQ 526
Query: 223 LLIS----EKGNLVALVDKNTLISNYSNPPSFIFS 253
+ +G V +++ N Y SF S
Sbjct: 527 WKVHMLDVGQGMSV-VIESNGRAIVYDTGASFGAS 560
>gi|289425534|ref|ZP_06427311.1| ComEC/Rec2-like protein [Propionibacterium acnes SK187]
gi|289154512|gb|EFD03200.1| ComEC/Rec2-like protein [Propionibacterium acnes SK187]
gi|313764600|gb|EFS35964.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL013PA1]
gi|313792290|gb|EFS40391.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL110PA1]
gi|313801761|gb|EFS42995.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL110PA2]
gi|313816137|gb|EFS53851.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL059PA1]
gi|313827960|gb|EFS65674.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL063PA2]
gi|313838591|gb|EFS76305.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL086PA1]
gi|314915594|gb|EFS79425.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL005PA4]
gi|314919939|gb|EFS83770.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL050PA3]
gi|314931953|gb|EFS95784.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL067PA1]
gi|314955820|gb|EFT00220.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL027PA1]
gi|314958302|gb|EFT02405.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL002PA1]
gi|314962949|gb|EFT07049.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL082PA1]
gi|315077592|gb|EFT49648.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL053PA2]
gi|315098393|gb|EFT70369.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL059PA2]
gi|315101251|gb|EFT73227.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL046PA1]
gi|315108475|gb|EFT80451.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL030PA2]
gi|327450923|gb|EGE97577.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL087PA3]
gi|327452998|gb|EGE99652.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL092PA1]
gi|327453727|gb|EGF00382.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL083PA2]
gi|328754345|gb|EGF67961.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL087PA1]
gi|328754925|gb|EGF68541.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL025PA2]
Length = 762
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 329 VGFWLSVCATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGTVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGMPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAM 493
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 494 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|238795853|ref|ZP_04639366.1| hypothetical protein ymoll0001_25250 [Yersinia mollaretii ATCC
43969]
gi|238720316|gb|EEQ12119.1| hypothetical protein ymoll0001_25250 [Yersinia mollaretii ATCC
43969]
Length = 727
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/206 (16%), Positives = 67/206 (32%), Gaps = 27/206 (13%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+ LS P +F + ++ +Y + S W I
Sbjct: 285 ALILLSEPLAVLS-----DSFWLSCLAVFSLICWY--HWVPLSVRFRVGWRGLVIRWFHL 337
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
F + G FH + ++ + AN+ A+P++S + +P L+A+ +
Sbjct: 338 QFGMMLLLMPLQIGL----------FHGVSLFSIPANLWAVPLISLLTVPCVLLAMAFTL 387
Query: 139 LSLDNIPFGVM-AWGLDIIIH-IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
L F VM + ++ + H + TS +L ++
Sbjct: 388 LPTIAGVFWVMADMSITAVLLPLNHLRAGW------FHTGVTSVALGYGGWLGILIW--R 439
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPD 222
+ S IG+ + + +S D
Sbjct: 440 FQWWRSYPIGVVALCVNLALFSHRRD 465
>gi|294791901|ref|ZP_06757049.1| ComEC/Rec2-related protein [Veillonella sp. 6_1_27]
gi|294457131|gb|EFG25493.1| ComEC/Rec2-related protein [Veillonella sp. 6_1_27]
Length = 741
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/170 (11%), Positives = 58/170 (34%), Gaps = 21/170 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ Y A I + P LFD +F + + +
Sbjct: 388 RLYQAKQALCICAIICLVYDPF-----SLFDVSFQLSFGATYGLLIW------------- 429
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++I + + + + +FH I + L+A + P+L
Sbjct: 430 GKVLYERIQWLPRWIKTPFVLCVS--AQLLILPLQLYYFHYISIASLLAACIVAPLLDIS 487
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
++ + ++ + + + + ++ L I +++ H + +++ +G +
Sbjct: 488 IVLIFVSTLVSYVFPIS-LIWSLVDVLLRISLYLNHVLGRSYSLLWLGMM 536
>gi|294501313|ref|YP_003565013.1| ComE operon protein [Bacillus megaterium QM B1551]
gi|294351250|gb|ADE71579.1| ComE operon protein [Bacillus megaterium QM B1551]
Length = 763
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/194 (11%), Positives = 59/194 (30%), Gaps = 32/194 (16%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +K + + L P G F +F+ + I +
Sbjct: 296 IKIQRKILLVDSISLAFMAMLLFKPYYLFDVG-FQLSFAVSFALILSSQTILP------- 347
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + S+ L+ +F+ + + L N++ +P+
Sbjct: 348 ---------------RFHSSFSQLMVVSAIAQISSLPLLLYYFYGVSLLSLPLNMVFVPL 392
Query: 122 LSFVVIPAGLIAI---LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
S V++P L+ + +L+ + + ++ L + +F G+
Sbjct: 393 FSLVILPLCLLILFVRILLP-GVSELLEQILHVLLLFCEKLLGFFEWIPADFVTGKPH-- 449
Query: 179 SFVTIVVEFLLMVF 192
++ + +
Sbjct: 450 ---IVLFLGMYLCI 460
>gi|227514788|ref|ZP_03944837.1| competence protein EC [Lactobacillus fermentum ATCC 14931]
gi|227086836|gb|EEI22148.1| competence protein EC [Lactobacillus fermentum ATCC 14931]
Length = 745
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 22/223 (9%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
IS + P ++ S ++ + + + + S + + F
Sbjct: 308 AISLLIQTLISPSILLSMGGQLSYLLSFCLTWFEQPSGLKQTLRLSLVSLPPLLHSVYQF 367
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFG---VMAWGLDIIIHI 159
H + L+ N L IP S +++P + +L L L + + GL +
Sbjct: 368 HLLS---LVINYLMIPFFSLIIMPLAIGGGILYPLFPGLGAVVNAGLILFHRGLAAL--- 421
Query: 160 AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC--KTNIRHIGSIMIGITIIILFTFPY 217
+ G++P V + + L MV + ++ + + +T + L
Sbjct: 422 ----ANLPGTITFGKVPAW--VAVSLVLLTMVTWEKRGAVKWL-VLGYVVTFVWLHFPLQ 474
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPS--FIFSQWKSA 258
+ I + ++ N + F WK
Sbjct: 475 GEVTFVDIGQGDCIIIREPFNRRVMMIDTGGKLNFQTEGWKKR 517
>gi|332760116|gb|EGJ90414.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri 2747-71]
Length = 398
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 169 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 217
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 218 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPMQIVIFHGISLTSFIANLFAIPLVTFI 271
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 272 TVPLILAAMVVHFSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIVECWQWLSF 328
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 329 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 367
>gi|54309553|ref|YP_130573.1| Rec2-like protein [Photobacterium profundum SS9]
gi|46913989|emb|CAG20771.1| hypothetical Rec2-related protein [Photobacterium profundum SS9]
Length = 804
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/201 (10%), Positives = 59/201 (29%), Gaps = 16/201 (7%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
++ + ++ + I + P + F + + I Y ++ +
Sbjct: 317 LIRLRIQWPGWKIFIVALTICLMLNPLA-----SYAAGFWMSFTAVF-ILYLANLGGVRR 370
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ ++ A + F I + + N +++P
Sbjct: 371 QHTDQTENNLDYQKDL-LWEKMKVLAQLQCVLLLFMLPLQWYWFGGISLLAPLINFVSVP 429
Query: 121 ILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPET 178
+S + +P L AI + L N+ + + W L +I +A + + +
Sbjct: 430 WVSTLTVPLVLAAIATVWFPWLSNVFWQLADWTLYPVIWLAEQSVGTW------LSLSSA 483
Query: 179 SFVTIVVEFLLMVF-CKTNIR 198
++ + R
Sbjct: 484 WLPFLIGGMAWAALGWFISWR 504
>gi|67921015|ref|ZP_00514534.1| ComEC/Rec2-related protein [Crocosphaera watsonii WH 8501]
gi|67857132|gb|EAM52372.1| ComEC/Rec2-related protein [Crocosphaera watsonii WH 8501]
Length = 744
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 64/162 (39%), Gaps = 19/162 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + A+ + KK+ + I + S
Sbjct: 355 IWDLGFKLSFLATFALLVASP-------------FIEKKLDFLPPKLAGMI--AVPIAVS 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI-LLMILSLDNIPFGVMAWG 152
S ++ FH Y + NILA P++ +V+ + A+ +L+I +L + ++ W
Sbjct: 400 IWTSPLIMYFFHSFSFYLIPFNILATPLIMLLVVGGIISAVFILIIPNLGILIAKILFWP 459
Query: 153 LDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFC 193
L I++ A +I + F +G+I + + I +L+
Sbjct: 460 LQILLQSAQQIPQLKLSAFAVGQISLVTLIIIY--SILVTIW 499
>gi|313820183|gb|EFS57897.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL036PA1]
gi|313823009|gb|EFS60723.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL036PA2]
gi|314925412|gb|EFS89243.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL036PA3]
Length = 762
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 329 VGFWLSVCATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGTVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGMPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAM 493
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 494 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|86131515|ref|ZP_01050113.1| competence protein [Dokdonia donghaensis MED134]
gi|85817960|gb|EAQ39128.1| competence protein [Dokdonia donghaensis MED134]
Length = 674
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 62/185 (33%), Gaps = 16/185 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++ F Y + AI + + S S + +K+ + ++
Sbjct: 349 IYQVGFQLSYLAVIAILWVQPW---LASFWSPEVFILRKLRDVV---------SVTIAAQ 396
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH P +I+N+L IP L ++ ++ L + L +
Sbjct: 397 LGVMPLSLFYFHQFPGLFIISNVLIIPFLGLILGGGLIVCFLSVTDLLPEFIVQSYGGII 456
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF----LLMVFCKTNIRHIGSIMIGITI 209
D++ + ++ + + + +V F LL+ + R I + + I +
Sbjct: 457 DVMNNYIAWVAGQEDFVARHISVSATLMILVYMFMITTLLLCMKYSKRRLIVASLATIIL 516
Query: 210 IILFT 214
Sbjct: 517 TGFIV 521
>gi|314967977|gb|EFT12076.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL037PA1]
Length = 762
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 329 VGFWLSVCATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGTVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGMPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAM 493
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 494 VVRPPLPGWPGQWQVGICDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|315088784|gb|EFT60760.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL072PA1]
Length = 762
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 329 VGFWLSVCATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGTVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGMPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAM 493
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 494 VVRPPLPGWPGQWQVGVCDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|325108361|ref|YP_004269429.1| ComEC/Rec2-related protein [Planctomyces brasiliensis DSM 5305]
gi|324968629|gb|ADY59407.1| ComEC/Rec2-related protein [Planctomyces brasiliensis DSM 5305]
Length = 835
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/214 (14%), Positives = 68/214 (31%), Gaps = 16/214 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
I G+ L P LFD + + I ++ + +S ++
Sbjct: 355 GLAISGLVVL-----VVNPTWLFDTGTHLSFLAVGTILILMTMRPLPGPWDS-VDQEEQQ 408
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL- 131
S +Q + R ++G + FH + + G+ +LA+P+L V++ G+
Sbjct: 409 TSWWRQEAVTAFRLSVGI--TVVLLPLFGHVFHRVALAGIPGTVLALPLLMAVMLMLGMH 466
Query: 132 -----IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ + + S + A+ L + +A S R P + + ++
Sbjct: 467 LLWSTLCLAIAAPSAALLTGWPTAFLLSCLSDLAAWFSSVQLLNWFSRRPSAAILLLLYT 526
Query: 187 FLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSF 219
+ R + I+
Sbjct: 527 SAGLALYWWGRTRPLRPRWAIGWTAIVLLLFEMP 560
>gi|302874285|ref|YP_003842918.1| ComEC/Rec2-related protein [Clostridium cellulovorans 743B]
gi|307689451|ref|ZP_07631897.1| ComEC/Rec2-related protein [Clostridium cellulovorans 743B]
gi|302577142|gb|ADL51154.1| ComEC/Rec2-related protein [Clostridium cellulovorans 743B]
Length = 599
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 78/219 (35%), Gaps = 32/219 (14%)
Query: 1 MLSITKK----YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP 56
+L++++K YD + + + L P G F+ + I F
Sbjct: 255 ILTLSRKAFKNYDGVSSISLAAILILLFKPYEIIGAG-----FNLSFLATLGIIIF---- 305
Query: 57 KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI 116
N+ + + + + + + +++ F+ I + ++AN+
Sbjct: 306 ---------NSKIERYLYKVPSPIRESL--ALDFSSQVTTIPYMLMVFNNIAIGSVLANL 354
Query: 117 LAIPILSFVVIPA--GLIAILLMI-LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
+ +P+ S ++I ++A L + V+ + + I H + I + G
Sbjct: 355 VLVPVYSLIIIVGNCLIVAYFLTPVFNCIAYLVQVLFFSVRGISHFLNMI--MPRKLHGG 412
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
S + I F+ K R+ + + + ++++
Sbjct: 413 YFEGISMLLIYTSFI---LYKRGYRNFKCLPVILCLMMI 448
>gi|189424818|ref|YP_001951995.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter lovleyi SZ]
gi|189421077|gb|ACD95475.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter lovleyi SZ]
Length = 814
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/222 (10%), Positives = 62/222 (27%), Gaps = 17/222 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF+ +F + + + + W + +
Sbjct: 353 LFNLSFQLSFLSLWGLLVLTPLLTKPVEHLLKQEW----------QRMTVLFFAASLAAV 402
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAW 151
+ ++ FH + G+ AN++ +P+L + +A+ L S + W
Sbjct: 403 LATMAPVLASFHQVSFTGIAANLVVVPLLGYGATVLATMAVPLSFFMPSFAALVLMFTGW 462
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+ + I+ +TI + +L R ++ + +++
Sbjct: 463 LVQLSNTFVQWIARVPVLHSFSAGSTDVVITIALLAVLGFVHGRRTRMYAGSLLLVALVL 522
Query: 212 LFTFPYSF-----SPDLLISEKGNLVALVDKNTLISNYSNPP 248
+ +P L +G+ + +
Sbjct: 523 VHLWPGPALDGKLRMTFLSVGQGDATLIQLPDGRTMLVDGGG 564
Score = 43.6 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 60/200 (30%), Gaps = 6/200 (3%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+I K + + I ++ P PG FD+ +GI A G+ ++
Sbjct: 131 TIAKGHGSWLTGDRIRCPVKVRVPQLLGLPGEFDYGRYLTLRGIEATGWIPDAESVVLMR 190
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + I S+ IR + + L + A +
Sbjct: 191 GAARASWQRSIDSLAMRSQEFIRQCLPDSAQRGVVLALATGNQQEVPPDVAAAYTRAGVT 250
Query: 123 SFVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAH----NEFCIGRIP 176
+ + + ++ + ++ L + L + + A +S G P
Sbjct: 251 HILSVSGFHVGVVTAVWVIMLRWLMLRWEWLALQLDLRRAALLSTLPVMLLYLVFTGGAP 310
Query: 177 ETSFVTIVVEFLLMVFCKTN 196
T+ +V +++
Sbjct: 311 ATARSVFMVAAVVLAAWSER 330
>gi|327330754|gb|EGE72500.1| putative ComE operon protein 3 [Propionibacterium acnes HL097PA1]
Length = 762
Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 329 VGFWLSVCATAGILWWAKPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGTVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGTPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAM 493
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 494 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|269798021|ref|YP_003311921.1| cyclic nucleotide-binding protein [Veillonella parvula DSM 2008]
gi|269094650|gb|ACZ24641.1| cyclic nucleotide-binding protein [Veillonella parvula DSM 2008]
Length = 740
Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 58/170 (34%), Gaps = 21/170 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ Y A + + P LFD +F + + +
Sbjct: 387 RLYQAKQALCICAILCIIYDPF-----SLFDVSFQLSFGATYGLLIW------------- 428
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++I + + + + +FH I + L+A + P+L
Sbjct: 429 GKVLYERIQWLPRWIKTPFVLCVS--AQLLILPLQLYYFHYISIASLLAACIVAPLLDIS 486
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
++ + ++ + + + + ++ L I +++ H + +++ +G +
Sbjct: 487 IVLIFVSTLVSYVFPIS-LIWSLVDLLLRISLYLNHVLGRSYSLLWLGMM 535
>gi|218548429|ref|YP_002382220.1| hypothetical protein EFER_1057 [Escherichia fergusonii ATCC 35469]
gi|218355970|emb|CAQ88586.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 754
Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 79/229 (34%), Gaps = 27/229 (11%)
Query: 1 MLSIT-KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
ML I+ +++ + ++ P L ++A+ ++Y +
Sbjct: 293 MLKISGRQWSGWDVWLCCLAAILITDPIAILSDSL-----WLSAFAVAALIFWYQWCPLP 347
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
S + + ++ + I FH + + LIAN+ A+
Sbjct: 348 SLSLPRLLRPFVSLVHLQIGI------------TLLLLPVQIVIFHGLSLSSLIANLFAV 395
Query: 120 PILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
P+++F+ +P L +++ + L+ + + + L I+ + + +
Sbjct: 396 PLVTFISVPLILAGMVIHLTGPQVLEQGLWYLADYSLAILF---RALELLPGGWVNISEQ 452
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
LL + N + ++ IIL ++P +P + I
Sbjct: 453 WRWLAFSPWPGLL--IWRLN-AWRAVPFLCLSGIILLSWPLWRAPRIDI 498
>gi|5531412|emb|CAB50917.1| competence protein [Pseudomonas stutzeri]
Length = 741
Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 80/236 (33%), Gaps = 30/236 (12%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + ++ + + + + S +
Sbjct: 316 VLMVDPLASLQPG-----FWLSFVAVALLIWIFRGRLGVP-------------SWWRALL 357
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA-ILLMIL 139
+ +G + + + G +AN+LA+P +S +V+P L+ LL +
Sbjct: 358 YAQWAMALGLLPAMLVLGLP------VSLSGPLANLLAVPWISVLVVPLALLGSFLLWVP 411
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
L + L ++ + I+ + +P ++ + + L+++ +R
Sbjct: 412 WLGEALLWLAGGLLAVLFELLALIAGWQPAWLASALPLWAWSLVALGTLVLLLPAGVPLR 471
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGN----LVALVDKNTLISNYSNPPSF 250
+G++++ + + P ++ + + G LV D L F
Sbjct: 472 VLGTLLLAPLLFAPDSRPEQGRAEVWVFDVGQGLSVLVRTRDHALLYDAGPRYGDF 527
>gi|324113756|gb|EGC07731.1| competence protein [Escherichia fergusonii B253]
Length = 754
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/229 (13%), Positives = 79/229 (34%), Gaps = 27/229 (11%)
Query: 1 MLSIT-KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
ML I+ +++ + ++ P L ++A+ ++Y +
Sbjct: 293 MLKISGRQWSGWDVWLCCLAAILITDPIAILSDSL-----WLSAFAVAALIFWYQWCPLP 347
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
S + + ++ + I FH + + LIAN+ A+
Sbjct: 348 SLSLPRLLRPFVSLVHLQIGI------------TLLLLPVQIVIFHGLSLSSLIANLFAV 395
Query: 120 PILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
P+++F+ +P L +++ + L+ + + + L I+ + + +
Sbjct: 396 PLVTFISVPLILAGMVIHLTGPQVLEQGLWYLADYSLAILF---RALELLPGGWVNISEQ 452
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
LL + N + ++ IIL ++P +P + I
Sbjct: 453 WRWLAFSPWPGLL--IWRLN-AWRAVPFLCLSGIILLSWPLWRAPRIDI 498
>gi|302206694|gb|ADL11036.1| Competence protein ComE-like protein [Corynebacterium
pseudotuberculosis C231]
gi|308276937|gb|ADO26836.1| Competence protein ComE-like protein [Corynebacterium
pseudotuberculosis I19]
Length = 555
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/231 (15%), Positives = 75/231 (32%), Gaps = 15/231 (6%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ ++ P + I L G A + F+ + I +
Sbjct: 272 IAAMNASRTPPIHALCLAVICLLLWEPGLAAH----YGFALSVGATAGIIALCPLIYRPL 327
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + I +S + A + T + I + + ANI+A P
Sbjct: 328 ARANLRRKQVCIPDIILRSIAVAVAAELVTVPLVAMMA------GRISLVSVPANIIAAP 381
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++ + + L+ I +D ++ I +AH S +PE++
Sbjct: 382 VVPLITVIGLAAVALVWIPPIDWPVIQLLDLLASWIGIVAHWCSSWRGSTLGVPMPESAL 441
Query: 181 V-----TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ TI ++L+ F +G ++ +I+ T +L I+
Sbjct: 442 LGTLWVTIAAVWVLLAFQSQKAWPLGIALLVAAPVIVQTPREVDYQNLRIA 492
>gi|296127531|ref|YP_003634783.1| ComEC/Rec2-related protein [Brachyspira murdochii DSM 12563]
gi|296019347|gb|ADG72584.1| ComEC/Rec2-related protein [Brachyspira murdochii DSM 12563]
Length = 531
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 8/166 (4%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + A I L P+ + D +F + I +Y I
Sbjct: 330 DRNRNSVNALFLSALIILLLNPN-----SIKDISFQFSFLATLGIILYYPIINFYVIKNI 384
Query: 65 HNTWTWKKISSIKQSFLNEIRA--NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
N T K+ I +S + + + +I + I HF + + +IANI A+P+
Sbjct: 385 KNINTNNKVLEITKSIIIKSLSFLSINVFALIIVLPLSIYHFSILNLTSIIANIFAVPLS 444
Query: 123 SFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAH 167
++ + + + +I S + P + + ++I +A + S
Sbjct: 445 FIILSSSIITIVSYVIFSPISVYPALTVEFCSSLLIDLAKKFSNIS 490
>gi|332767861|gb|EGJ98051.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri 2930-71]
Length = 398
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 169 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 217
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 218 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPMQIVIFHGISLTSFIANLFAIPLVTFI 271
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 272 TVPLILAAMVVHFSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIVECWQWLSF 328
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 329 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 367
>gi|282599806|ref|ZP_05971932.2| DNA internalization-related competence protein ComEC/Rec2
[Providencia rustigianii DSM 4541]
gi|282567892|gb|EFB73427.1| DNA internalization-related competence protein ComEC/Rec2
[Providencia rustigianii DSM 4541]
Length = 792
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/245 (12%), Positives = 71/245 (28%), Gaps = 23/245 (9%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P+ L P +F + AI Y+ I + + + +
Sbjct: 343 PWQWALWSVAFILLIDPLAILS-----DSFWLSSFAVLAILYWIKIFP-LSDNIRYRPFI 396
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
K + I + F I + L AN+ +PI++++V+P
Sbjct: 397 GKIAPLLHLQVGLLILLI----------PIQVLLFGGINLMSLFANLWFVPIVTWIVVPT 446
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
LL I + F ++ ++++ + + + + L
Sbjct: 447 IFSLFLLPINYWQELAFQLID---EVLVFSLRPLIFLEGYWLEINSISWYVIFLFWGLLF 503
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKNTLISNYS 245
+ + +IG + + ++ L+ L ++ + L Y
Sbjct: 504 AILFHWHKNYIGLLSCIVALLFTNKTASKHESHDWCLTLLDVGHGLAVVIRQGELAILYD 563
Query: 246 NPPSF 250
+
Sbjct: 564 TGNRW 568
>gi|110804921|ref|YP_688441.1| hypothetical protein SFV_0914 [Shigella flexneri 5 str. 8401]
gi|110614469|gb|ABF03136.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|313650847|gb|EFS15248.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri 2a str. 2457T]
gi|332758999|gb|EGJ89309.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri 4343-70]
gi|333007026|gb|EGK26521.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri K-218]
gi|333019989|gb|EGK39260.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri K-304]
Length = 398
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 169 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 217
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 218 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPMQIVIFHGISLTSFIANLFAIPLVTFI 271
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 272 TVPLILAAMVVHFSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIVECWQWLSF 328
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + ++ + +++ + PD
Sbjct: 329 SP--WFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 367
>gi|89901253|ref|YP_523724.1| DNA internalization-like protein competence protein ComEC/Rec2
[Rhodoferax ferrireducens T118]
gi|89345990|gb|ABD70193.1| DNA internalization-related competence protein ComEC/Rec2
[Rhodoferax ferrireducens T118]
Length = 766
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 83/259 (32%), Gaps = 31/259 (11%)
Query: 1 MLSITKKYDPFPAETTIE-GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L ++ K P+P + + P F + + I +
Sbjct: 311 LLRLSGKRWPWPHVWLLTCAVVVAVDPWALL-----QAGFWLSFVAVG-ILFA------- 357
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
S + +++ + + ++ R + + L+ F + V GL AN LAI
Sbjct: 358 ----SDSGADYEERTGARGRLVSMFREQAVITLALTPLTLLL--FGQVSVVGLAANALAI 411
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
P ++ VV P + + + L + V AW + + ++
Sbjct: 412 PWVTLVVTPLAMAGVAVAPL------WDVAAWAIAALTWYLQMLAALSFATITVAQAPLW 465
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF--SPDLLISE--KGNLVALV 235
V ++ + + + ++L+ P +LL ++ +GN V +
Sbjct: 466 AGVAGVIGGAVLVMQLPWSLRLLGLPLMLPVLLWQAPRPPEGQFELLAADIGQGNAVLVR 525
Query: 236 DKNTLISNYSNPPSFIFSQ 254
+ Y P F
Sbjct: 526 TAH-HALLYDAGPRFSRES 543
Score = 37.5 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 75/239 (31%), Gaps = 10/239 (4%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ A + RL P G + P +DF + +G+ A GY + PK
Sbjct: 120 LQRQPAALQAGERWQFTVRLKAPHGASNPFGYDFELWLWEQGLQATGYVRAGPKDPAPQR 179
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIG---TYGSASASIFLIKHFHCIPVYGLI-----AN 115
T+ + +Q +I + G +A + ++ + + A+
Sbjct: 180 LIQTYR-HPVELARQLVREQIVGQVEDRKYAGLIAALVVGDQNAIDRADWDVFRATGVAH 238
Query: 116 ILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
+++I L + ++ + + + A ++ + + A
Sbjct: 239 LMSISGLHVTMFAWLATLVVGWLWRRSSRLCLWLPAPSAALVGGVLLAAAYALFSGWGVP 298
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
T + V L + + H+ + + + + L G L A
Sbjct: 299 SQRTVLMLATVGLLRLSGKRWPWPHVWLLTCAVVVAVDPWALLQAGFWLSFVAVGILFA 357
>gi|300858996|ref|YP_003783979.1| hypothetical protein cpfrc_01579 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686450|gb|ADK29372.1| putative membrane protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302331247|gb|ADL21441.1| Competence protein ComE-like protein [Corynebacterium
pseudotuberculosis 1002]
Length = 555
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 72/225 (32%), Gaps = 16/225 (7%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+ P A L P A + F+ + I + + +
Sbjct: 279 RTPPIHALCLAVICLLLWEPGLAAH-----YGFALSVGATAGIIALCPLIYRPLARANLR 333
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
I +S + A + T + I + + ANI+A P++ +
Sbjct: 334 RKQVCIPDIILRSIAVAVAAELVTVPLVAMMA------GRISLVSVPANIIAAPVVPLIT 387
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV----- 181
+ L+ I +D ++ I +AH S +PE++ +
Sbjct: 388 VIGLAAVALVWIPPIDWPVIQLLDLLASWIGIVAHWCSSWRGSTLGVPMPESALLGTLWV 447
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
TI ++L+ F +G ++ +I+ T +L I+
Sbjct: 448 TIAAVWVLLAFQSQKAWPLGIALLVAAPVIVQTPREVDYQNLRIA 492
>gi|15613898|ref|NP_242201.1| late competence operon required for DNA binding and uptake
[Bacillus halodurans C-125]
gi|10173951|dbj|BAB05054.1| late competence operon required for DNA binding and uptake
[Bacillus halodurans C-125]
Length = 773
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 92/257 (35%), Gaps = 41/257 (15%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
K+ P + + I + P +F F + +
Sbjct: 300 FRFQKRLAPIIVLSLVAVIYIIIEPYA-----IFQLGFQLSFL----------------T 338
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + +I + L+ + + + ++ HF +P+ + N+L +P+
Sbjct: 339 TCALLLSSSTLLQAINRPLLSLV--KVTFLAQLISMPVILYHFFELPILSVPLNLLFVPV 396
Query: 122 LSFVVIPAGLIAI--LLMILSLDNIPFGVMAWGLDIIIHIAHRI-----SVAHNEFCIGR 174
+SFV++P LL+ + +P + L+II+ I H++ + IG+
Sbjct: 397 VSFVLLPLSFFVASSLLIHPGVAELPLFI----LEIIVPIVHQLLLVLNEQSFAAVVIGK 452
Query: 175 IPETSFVTIVVEFLLMVFC---KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
S +++ ++ K + G+ + + +I + +S + ++ +
Sbjct: 453 PSLNSVFLMMISLIIGWAWLERKEPFKAWGAFSVVLFLIAWQIYSPYWSNEAIV----TM 508
Query: 232 VALVDKNTLISNYSNPP 248
+ + ++ +
Sbjct: 509 IDVGQGDSFLIELPRRK 525
>gi|160900512|ref|YP_001566094.1| DNA internalization-like competence protein ComEC/Rec2 [Delftia
acidovorans SPH-1]
gi|160366096|gb|ABX37709.1| DNA internalization-related competence protein ComEC/Rec2 [Delftia
acidovorans SPH-1]
Length = 832
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 75/249 (30%), Gaps = 29/249 (11%)
Query: 10 PFPAETTIE-GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
P+PA + + + P L+ F + + + + +
Sbjct: 374 PWPAVWCLALAVVVVLDPWA-----LWQAGFWLSFVAVGVLLATDARMQGAQRPSLPARA 428
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+ S + + + F + + GL+AN+ AIP ++FVV P
Sbjct: 429 LALWGEQWR--------------ISLALAPLGLMLFGQLSLSGLLANLAAIPWVTFVVTP 474
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEF 187
L+ L + A L ++ + + + + P + + +
Sbjct: 475 LALLGA------LWPPLWTGAALALAPLLELLQWLDQWAWAVVQLPQSPLWAGLAALCGG 528
Query: 188 LLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL-ISNYS 245
L +V R G M + P DL+ + G A++ + Y
Sbjct: 529 LALVAPVPAGWRCWGLAMCLPALWWPSPAPAHGEFDLMAVDIGQGNAVLVRTARHALLYD 588
Query: 246 NPPSFIFSQ 254
P +
Sbjct: 589 TGPQYGLDS 597
>gi|240949617|ref|ZP_04753952.1| recombination protein 2 [Actinobacillus minor NM305]
gi|240295875|gb|EER46551.1| recombination protein 2 [Actinobacillus minor NM305]
Length = 715
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 53/155 (34%), Gaps = 11/155 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
++Y + + + P +F + ++ +Y + +
Sbjct: 241 FFRRRYTSLQIWWRVVALLLVFEPVAILS-----DSFWLSILAVLSLILWY---RYFPLA 292
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + I + ++ I +G + S F L AN+L +P+
Sbjct: 293 QFSWIPFSQTQHKIGKVIVSLIHLQMGIW--LIFSPVQFFFFAGTSPLSLPANMLIVPLY 350
Query: 123 SFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDII 156
S V++P L +L + S + ++ + L ++
Sbjct: 351 SMVLVPIILFTLLTDNLFSTWALADYIVQFSLWLL 385
>gi|30250333|ref|NP_842403.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas europaea ATCC 19718]
gi|30181128|emb|CAD86320.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas europaea ATCC 19718]
Length = 799
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 61/205 (29%), Gaps = 34/205 (16%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P PG F + ++ I S +
Sbjct: 354 DPWSVIAPG-----FWLSFAAVALICLVISGRIGRPGVVAGW------------------ 390
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
I + L+ F I + IAN +AIP++SF+++P L+A + L+ +
Sbjct: 391 -MRIQWAITLGLFPLLLILFQQISLISPIANAVAIPVISFIIVPLALLATIP---GLEFL 446
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+ L I + + + + P + + + + + +
Sbjct: 447 LL-IAHPVLQITMGVLQWLGELPLATWQQQAPPLWAVIAATLGVVW-----LLLPGGPGL 500
Query: 204 MIGITIIILFTFPYSFSPDLLISEK 228
+ + + P LIS +
Sbjct: 501 GVSAGFPARWLGILAGVPLFLISPE 525
>gi|290473872|ref|YP_003466746.1| putative recombination protein with metallo-hydrolase domain
[Xenorhabdus bovienii SS-2004]
gi|289173179|emb|CBJ79952.1| putative recombination protein with metallo-hydrolase domain
[Xenorhabdus bovienii SS-2004]
Length = 781
Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 77/242 (31%), Gaps = 21/242 (8%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
+ L P +F + + A+ +++ + W+W + ++
Sbjct: 341 AALILLFDPLAILS-----DSFWLSFTAVMALLFWFHWMPLPEGIRYGWHWSWLRGLHMQ 395
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ + L+AN+ A+PI+SF+ +P ++A+
Sbjct: 396 LGMMLMLLPLQLLLFQGLNIA------------SLVANLWAVPIVSFLSVPLVMLALSCF 443
Query: 138 ILSLDNIPFG-VMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFVTIVVEFLLMVFCKT 195
L + ++ + + + +A + H+ F G P + V +
Sbjct: 444 FLPVIQPILWQLVDYSI--VFALAPLQVLTHSWFETGHFPIFITLVGWFSVVFWRLGWWK 501
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+ + + ++IGI + L ++ L ++DK + +
Sbjct: 502 SYKWLLGVLIGIIVCYLKRDDEYQWRFSMLDVGHGLAVVIDKGGKAIIFDTGNRWETGSM 561
Query: 256 KS 257
Sbjct: 562 AE 563
>gi|303228978|ref|ZP_07315788.1| ComEC/Rec2-like protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516392|gb|EFL58324.1| ComEC/Rec2-like protein [Veillonella atypica ACS-134-V-Col7a]
Length = 730
Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 64/191 (33%), Gaps = 35/191 (18%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D +F + + F +P ++ I+ + + I
Sbjct: 400 DVSFQLSFGATYGLLLF-GMP------------LYRWITVLPPIVKAPLVLCIS--AQLL 444
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIP--AGLIAILLMILSLDNIPFGVMAWGL 153
F + +FH + + L A I+ P+L ++ I L + + + +
Sbjct: 445 LIPFQLYYFHYLSLASLFAAIIITPLLDIAIVMLFGCTIISLFIPIGMVWNV-------I 497
Query: 154 DIIIHIAHRI-SVAHNE----FCIGRIPETSFVTI--VVEFLLMVFCKTNIRHI----GS 202
D I+ I + + N + IG I T V V L + ++ G
Sbjct: 498 DWILTICLYVNAHLANSSICLWWIGTISATLGVLYYGCVGLLYINLVSLKLKFRTFTKGI 557
Query: 203 IMIGITIIILF 213
+++GI II +
Sbjct: 558 VLMGIGIIAIA 568
>gi|332141277|ref|YP_004427015.1| DNA internalization-related competence protein ComEC/Rec2
[Alteromonas macleodii str. 'Deep ecotype']
gi|327551299|gb|AEA98017.1| DNA internalization-related competence protein ComEC/Rec2
[Alteromonas macleodii str. 'Deep ecotype']
Length = 855
Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 78/243 (32%), Gaps = 36/243 (14%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P + ++ L P +F + I
Sbjct: 396 WRPLNIGVAMLALSLLIFPLSMLS-----ASFYLSVGAVGCI------------------ 432
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W + ++++ + + + + F L+AN++A+P+++ + +
Sbjct: 433 WFLITVFGLQRNAWYVVLIKLQLALTFIMMPLTLIWFGSASFIALVANLIALPLVTLI-L 491
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGL--------DIIIHIAHRISVAHNEFCIGRIPETS 179
P GL+++L + DN + + ++ +S I S
Sbjct: 492 PIGLLSLLAIHF-FDNTVVAFLGSLILKQSDYLFGYLLEYLAYLSKYELSLVYAPIESGS 550
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITII---ILFTFPYSFSPDLLISEKGNLVALVD 236
+ + ++ +++ ++++ + +I + P + L + + G AL+
Sbjct: 551 ALCFLTAIVVTFLPPWRYKNVCAVLLSLPLIVEVCWWVSPNDSAWTLHVLDAGQATALMV 610
Query: 237 KNT 239
Sbjct: 611 TKG 613
>gi|257465428|ref|ZP_05629799.1| recombination protein 2 [Actinobacillus minor 202]
gi|257451088|gb|EEV25131.1| recombination protein 2 [Actinobacillus minor 202]
Length = 721
Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 73/236 (30%), Gaps = 23/236 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++Y + + + P +F + ++ +Y + ++
Sbjct: 249 RRRYTSLQIWWRVVALLLVFEPVAILS-----DSFWLSILAVLSLILWY---RYFPLAQF 300
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ I + ++ + IG + S F L AN+L +P+ S
Sbjct: 301 SWIPFSQTQHKIGKVIVSLLHLQIGIW--LIFSPVQFFFFAGTSPLSLPANMLIVPLYSM 358
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V++P L +L L +A ++ N + + + + +
Sbjct: 359 VLVPIILFTLLTDNLFSTWGLADYIAQFSLWLLK------PLSNAWYDLSLWQQGQILFI 412
Query: 185 VEFLLMVFC------KTNIRHIGSIMIGITIIILFTFPYSFSP-DLLISEKGNLVA 233
+L + + G + ++ + + +P + + + G +A
Sbjct: 413 NGAVLFGLYMKNSQKAKSFLYKGIAVFSSAYVVFCLYSWRETPVEWITFDVGQGLA 468
>gi|314923142|gb|EFS86973.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL001PA1]
Length = 762
Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 329 VGFWLSACATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGTVSTTGLVANLAAAPFVPPASALGMVTGLLAFIWPPLGTPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCVGLALITPTVLARPWLTALAGLAVIAAM 493
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 494 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|123441854|ref|YP_001005837.1| hypothetical protein YE1542 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088815|emb|CAL11621.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 761
Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 81/242 (33%), Gaps = 24/242 (9%)
Query: 38 NFSSYYKGISAIG-YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + ++ +FY +P + + + L + I
Sbjct: 333 SFWLSCLAVFSLICWFYWVPLAPRFTTGWQGLVIRGLHLQLGMMLLLMPLQIVL------ 386
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
FH I ++ + AN+ A+P++S + +P L+A++ +L S+ + + + L
Sbjct: 387 -------FHGISLFSIPANLWAVPLVSLITVPCVLLALVFTLLPSVAGMFWSLADLSLTA 439
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFT 214
++ + ++ S +L M+ + R+ ++ + + ++
Sbjct: 440 VL-----LPLSPMRIGWFYTGSASVAIGFGGWLAMLIWRFAWWRNYSIGVMVLCVNLVLF 494
Query: 215 FPYSFSPDLLI---SEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ L ++++ + + S +I P+ +
Sbjct: 495 TQRRDEYQWRVDMLDIGHGLAVVIEREGKAIIFDTGNRWGTGSMASKVILPYLRWRGITI 554
Query: 272 ED 273
E
Sbjct: 555 EQ 556
>gi|238763342|ref|ZP_04624306.1| hypothetical protein ykris0001_2980 [Yersinia kristensenii ATCC
33638]
gi|238698441|gb|EEP91194.1| hypothetical protein ykris0001_2980 [Yersinia kristensenii ATCC
33638]
Length = 730
Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/221 (10%), Positives = 68/221 (30%), Gaps = 24/221 (10%)
Query: 38 NFSSYYKGISAIG-YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + ++ +FY +P + I L + I
Sbjct: 302 SFWLSCLAVFSLICWFYWVPLSPRFKTGWQGLVIRAIHLQLGMMLLLMPLQITL------ 355
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
F I ++ ++AN+ A+P++S + +P L+A+ +L + + + + L
Sbjct: 356 -------FRGISLFSILANLWAVPLVSLITVPCVLLALAFSLLPVVAGVFWSLADISLTA 408
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFT 214
++ ++ S +L M + R+ ++ + + ++
Sbjct: 409 VL-----FPLSLMRMGWFHTGTASVAIGFSGWLAMFIWRFGWWRNYSIGVMVLCVNLVLL 463
Query: 215 FPYSFSPDLLI---SEKGNLVALVDKNTLISNYSNPPSFIF 252
+ L +++ + +
Sbjct: 464 TQRRDEYQWRVDMLDIGHGLAVVIEHKGKAIIFDTGNRWAT 504
>gi|257126294|ref|YP_003164408.1| ComEC/Rec2-related protein [Leptotrichia buccalis C-1013-b]
gi|257050233|gb|ACV39417.1| ComEC/Rec2-related protein [Leptotrichia buccalis C-1013-b]
Length = 537
Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 8/115 (6%)
Query: 29 PAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
P LFD + Y + AI + K Y + + + + +
Sbjct: 352 VLNPYSLFDISMQLSYAAVVAIIFVNPEFKKFYQEKILDKIKNEVLRNTVDLIF------ 405
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
+ ++ + +F +P++ + NI+ IP+ VVI A+LL I L
Sbjct: 406 LSLTIQITSIPLFLYYFEKLPLFSFLLNIVGIPV-GTVVIQCLFFAVLLNIFKLS 459
>gi|120437296|ref|YP_862982.1| competence protein [Gramella forsetii KT0803]
gi|117579446|emb|CAL67915.1| competence protein [Gramella forsetii KT0803]
Length = 680
Score = 56.3 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 12/88 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF F Y + +I F + ++ K I+ + Q +++
Sbjct: 357 LFQIGFQLSYLAVFSIIVFQPLIYGLFKP------NLKVINYLWQ------LSSVSIAAQ 404
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPI 121
+ +FH P LI+N++ +P
Sbjct: 405 IGVIPLSLYYFHQFPGLFLISNLVILPF 432
>gi|126657157|ref|ZP_01728323.1| ComEC/Rec2-related protein [Cyanothece sp. CCY0110]
gi|126621428|gb|EAZ92139.1| ComEC/Rec2-related protein [Cyanothece sp. CCY0110]
Length = 748
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 21/164 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ +K +P + + P ++D F + A+
Sbjct: 330 VDRKTNPLRTLLLSAFLLLVFNPLW-----IWDLGFQLSFLATFALLV------------ 372
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ K+ + + I + S S ++ FH Y + NILA P++
Sbjct: 373 -TSPSIENKLDFLPPKISSMI--AVPVAVSIWTSPLIMYVFHTFSFYIIPFNILATPLII 429
Query: 124 FVVIPAGLIAILLMILSLDNI-PFGVMAWGLDIIIHIAHRISVA 166
+VI + AI L+I + + + W L+I++H A +I+
Sbjct: 430 LLVIGGMISAIFLLIFPVFGVEIAKFLFWPLEILLHSAKQITQL 473
>gi|314966911|gb|EFT11010.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL082PA2]
gi|315093171|gb|EFT65147.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL060PA1]
gi|315103324|gb|EFT75300.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL050PA2]
gi|315105529|gb|EFT77505.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL030PA1]
gi|327327732|gb|EGE69508.1| putative ComE operon protein 3 [Propionibacterium acnes HL103PA1]
Length = 762
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 329 VGFWLSACATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGTVSTTGLVANLAAAPFVPPASALGMVTGLLAFIWPPLGTPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCVGLALITPTVLARPWLTALAGLAVIAAM 493
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 494 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|282854161|ref|ZP_06263498.1| ComEC/Rec2-like protein [Propionibacterium acnes J139]
gi|282583614|gb|EFB88994.1| ComEC/Rec2-like protein [Propionibacterium acnes J139]
Length = 764
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 331 VGFWLSACATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 375
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 376 QPVITWMAGTVSTTGLVANLAAAPFVPPASALGMVTGLLAFIWPPLGTPFGRLAGWCVQP 435
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 436 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCVGLALITPTVLARPWLTALAGLAVIAAM 495
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 496 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 538
>gi|149173315|ref|ZP_01851946.1| probable competence protein ComEC/Rec2 [Planctomyces maris DSM
8797]
gi|148848121|gb|EDL62453.1| probable competence protein ComEC/Rec2 [Planctomyces maris DSM
8797]
Length = 882
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 23/197 (11%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY--------------FYSIPKMIYSSES 64
I L P LFD + ++AI + + + + +S+
Sbjct: 383 LIILLINP-----TDLFDVGTQLSFLAVAAILWTVNQDFYQNLYQQTWLPLRWRLKASDP 437
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ L + + + + + ++ HF + GLI N L P L
Sbjct: 438 LLQTPLQRFCFQYFRMLYTVFL-VTFFIWITTAPLVLCHFQLLAPAGLIVNSLIFPFLFL 496
Query: 125 VVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+++ L+ + L+ + I L ++ + S P ++
Sbjct: 497 ILLLGYLLMFVGSLLPFTAG-IFGFCFDQSLRFLLWVVEWTSNLPLSHFELSAPAPWWIL 555
Query: 183 IVVEFLLMVFCKTNIRH 199
+ LL+ +
Sbjct: 556 VYYILLLLSVLPGIWKL 572
>gi|119486029|ref|ZP_01620091.1| ComEC/Rec2-related protein [Lyngbya sp. PCC 8106]
gi|119456804|gb|EAW37932.1| ComEC/Rec2-related protein [Lyngbya sp. PCC 8106]
Length = 832
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 15/169 (8%), Positives = 62/169 (36%), Gaps = 19/169 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + ++ +G S+P +I ++ I + + + S
Sbjct: 399 IWDLGFQFSF--LATLGLLVSVPPII-----------NRLDWIPPTIAS--LLAVPLAAS 443
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
+ F+ + Y ++ N++ +P ++ + + ++ + + ++ +
Sbjct: 444 IWTVPLQLYVFNVVSPYSILVNVITVPFVAVITLGGLFAGVVALFWPTAGSAISALLEYP 503
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTI--VVEFLLMVFCKTNIR 198
+ ++ + S +G + + + + ++ + ++ + R
Sbjct: 504 VGGLLALVRFFSQQPGNSMALGSLSQFQLIALYSLIGLVWLIGSQREAR 552
>gi|22299245|ref|NP_682492.1| competence protein [Thermosynechococcus elongatus BP-1]
gi|22295427|dbj|BAC09254.1| competence protein [Thermosynechococcus elongatus BP-1]
Length = 761
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/182 (11%), Positives = 59/182 (32%), Gaps = 16/182 (8%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + + ++ + + + + +
Sbjct: 360 DIGFQLSFLATLGLIVSAQP-------------ISDRLHWLPTPLRSPL--AVALAATLW 404
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWGLD 154
+ F IPVYGL AN++A P L + + + A + ++ L + ++++
Sbjct: 405 VLPLSLAIFGTIPVYGLPANVIANPFLILLTVGGFISATVGFILPPLGSALAWLLSYPTA 464
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+++ + I V ++ +L+V+ R ++ + + ++
Sbjct: 465 LLLWLIETIGRWPGAVIALGSLGWLQVIVLYGLMLLVWLSPPWRRRWFLLFTLGVTLVLV 524
Query: 215 FP 216
Sbjct: 525 PF 526
>gi|189347050|ref|YP_001943579.1| ComEC/Rec2-related protein [Chlorobium limicola DSM 245]
gi|189341197|gb|ACD90600.1| ComEC/Rec2-related protein [Chlorobium limicola DSM 245]
Length = 734
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/354 (10%), Positives = 93/354 (26%), Gaps = 38/354 (10%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
++ ++ + + I L P PG F + AI Y ++Y
Sbjct: 337 TLGRRSYGVNSLAVSDIIILLFDPFDLFNPG-----FLMTNAAVLAILLVYP---LLYPP 388
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI---LAI 119
+ +S + S + +F V L AN+ L
Sbjct: 389 GHKEEGVLRAVSRF-----FLGSFFVSLAAIIGVSPVIAYYFGTFSVVSLAANLPVVLFS 443
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPF--GVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
++ + ++P L+ L + A + + A S +
Sbjct: 444 TVMMYALMPM-LLFNLFAPFPASLFGMSGWLFA---RLTLDSALFFSKVPYASISLKPDI 499
Query: 178 TSFVTIVVEF---LLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK-GNLV 232
+ + K R + ++ ++ S L++ G +
Sbjct: 500 VEVLIYYAAGTATAWFFYRKAWGRLLIALLLGCNALLWYGMADQSQPGKGLVTVNLGRNL 559
Query: 233 ALV--DKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQ 290
AL+ ++ + + + + P + + + + + M
Sbjct: 560 ALLYATESETVIVDAGKKRRDAERIMRQIDQHRLPPPAAAVQFYSKDSLFNALPVRLHMP 619
Query: 291 PRKFLCIKKSFCVGC--------HRSDVIVGVLKRKDMIRLSCQ-LSDILITTI 335
+ S V + + +R +D++I +
Sbjct: 620 NSQERLALSSMVVSRPLEKVLRISSRGRSLLYVSGTSRLRQDPAWKADVVILAV 673
>gi|253574667|ref|ZP_04852007.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus sp. oral taxon 786 str. D14]
gi|251845713|gb|EES73721.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus sp. oral taxon 786 str. D14]
Length = 932
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 59/185 (31%), Gaps = 19/185 (10%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ +A L P + L + +F + + + F +
Sbjct: 363 VLAAVAMLMLIWEPYY--LLNVSFQLSFAVTAGLIVFVPR-------------LTPYLRW 407
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ N + I + I +F+ + AN+L +P++ + +P G A+L
Sbjct: 408 LPGKIGNAV--AITLAAQLVSFPLTIFYFNQFSFLSIPANLLLVPLIGTLALPLGTGALL 465
Query: 136 LMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L +LS L + W + + +S + P ++ ++
Sbjct: 466 LGLLSIKLGAWAALPVRWLNEATFAATNWLSARSGFMTYWKSPSLLWIAAFYAGCYLLVY 525
Query: 194 KTNIR 198
+ R
Sbjct: 526 WGHRR 530
>gi|325496852|gb|EGC94711.1| hypothetical protein ECD227_0949 [Escherichia fergusonii ECD227]
Length = 754
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 77/230 (33%), Gaps = 29/230 (12%)
Query: 1 MLSIT-KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
ML I+ +++ + ++ P L ++A+ ++Y +
Sbjct: 293 MLKISGRQWSGWDVWLCCLAAILITDPIAILSDSL-----WLSAFAVAALIFWYQWCPLP 347
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
S + + ++ + I FH + + LIAN+ A+
Sbjct: 348 SLSLPRLLRPFVSLVHLQIGI------------TLLLLPVQIVIFHGLSLSSLIANLFAV 395
Query: 120 PILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
P+++F+ +P L +++ + L+ + + + L I+ + + +
Sbjct: 396 PLVTFISVPLILAGMVIHLTGPQVLEQGLWYLADYSLAILF---RALELLPGGWVNISEQ 452
Query: 177 ETSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTFPYSFSPDLLI 225
V + + ++ IIL ++P +P + I
Sbjct: 453 WRWLAFSP----WPVLLIWRLNAWRAVPFLCLSGIILLSWPLWRAPRIDI 498
>gi|315650249|ref|ZP_07903322.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315487494|gb|EFU77803.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 746
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 22/128 (17%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ I +SP +F F + + ++G + KK+
Sbjct: 314 SATAICLMSPFE------VFGVGFQLSFGAVLSLG-------------GVLAFVLKKLKK 354
Query: 76 IKQSFLNEI--RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
K+S +I + ++ +F+ PVY + NI+AIP++SFV+ + +++
Sbjct: 355 AKKSCSEKIFEIILVSVGVQVLTLPLVLYYFYSFPVYAFLLNIVAIPLMSFVLY-SAILS 413
Query: 134 ILLMILSL 141
++L ++SL
Sbjct: 414 LVLNMMSL 421
>gi|311745830|ref|ZP_07719615.1| putative ComEC/Rec2 family protein [Algoriphagus sp. PR1]
gi|126576033|gb|EAZ80311.1| putative ComEC/Rec2 family protein [Algoriphagus sp. PR1]
Length = 643
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 72/243 (29%), Gaps = 29/243 (11%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+K F + PS +F+ F Y + +G P ++
Sbjct: 321 DRKPSIFNVLAFSATLMITFNPSV-----IFEVGFQLSYLAV--LGIVMLQPLILKCWNP 373
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
N K + Q I + + +FH P Y L+ N++ IP+
Sbjct: 374 PN----KWLEYFWQIVAVSIA------AQLATFPLTLFYFHAFPTYFLLGNLIIIPLAFL 423
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS--FVT 182
++ + + L + +++ + I RI E F+
Sbjct: 424 IMHLGIPLLAFGWVPVLGELLGVLVSKTILFQNFIVLRIQSLPYPQIDQISIEWYSMFLV 483
Query: 183 IVVEFLLMVFC---KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
V+ + + K + IG LF + D K ++ ++
Sbjct: 484 WVLLLIWYCWPDMKKRKLAWIGLF-------SLFLWAGLRVYDQTQIPKKEMILARTESG 536
Query: 240 LIS 242
++
Sbjct: 537 VLI 539
>gi|291522754|emb|CBK81047.1| DNA internalization-related competence protein ComEC/Rec2
[Coprococcus catus GD/7]
Length = 788
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/352 (10%), Positives = 98/352 (27%), Gaps = 48/352 (13%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI-----PKMIYSSESH 65
A + I +S P G+ + + +IG + P + ++
Sbjct: 305 LSALSFSALILFMSRPLSILQTGV-----WFSFAAVLSIGVLWPAIEKCIPWQYAKTRNY 359
Query: 66 NTWTWKKISSIKQSFLNEIRANI-----GTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
KK +K + I I + + +P+ G N+L +P
Sbjct: 360 KIEHLKKTMGVKTTIREWIERMIRYIGPSAAVTIGTLPLTAFCYGAVPLVGFFMNLLVLP 419
Query: 121 ILSFVV-IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISV----AH-NEFCIGR 174
+++ V + G + L+ +S+ L I+ I + + + G
Sbjct: 420 LMNLFVPMALGAGGVSLLSISMAG----FCGGTLHFILQINRFLCEKMLILPFSVWRTGV 475
Query: 175 IPETSFVT---IVVEFLLMVFCK---------TNIRHIGSIMIGITIIILFTFPYSFSPD 222
P + +++ F L+ + I S ++ + + + P
Sbjct: 476 PPSAWLLIDYGLMIGFALLALPEHKWFKHTDVGKILIKKSWLLMLAGLFILIPIRKMHPM 535
Query: 223 LLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSL 282
+ + G + + +N W + + +
Sbjct: 536 VAFIDVGQ------GDGIFMRTANGT-----TWLIDGGSSDVQNVGKYRIIPFMNYYGEK 584
Query: 283 KEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITT 334
+ I + + + + + +L+D+ ++
Sbjct: 585 SIDYACVSHGDQDHISGVRELLLEKRIRHLVLTAVSETDETVRELADLAVSN 636
>gi|157375962|ref|YP_001474562.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sediminis HAW-EB3]
gi|157318336|gb|ABV37434.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sediminis HAW-EB3]
Length = 767
Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 64/189 (33%), Gaps = 10/189 (5%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + +S I S ++ S+ + W+ F + I S
Sbjct: 324 GFWLSFLALSIILLTISRTQVSISNINTEHSRWQGFRQKFTLFWS-----IQWRLSLGLG 378
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL----MILSLD-NIPFGVMAWG 152
+ F + YGL+ N L +P S VVIP ++++++ M + + + F ++
Sbjct: 379 LLQALFFGGMSPYGLLFNFLFVPWFSIVVIPLSILSLVMWGAAMAIGFELSGIFAIVDIS 438
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
L +++ + + + + L ++ ++ + + +L
Sbjct: 439 LAPMLYAFTIFKQLPSAWFPISDKMIMAFALGLMGLWLITHSIKVKWKLVSSVFLLPALL 498
Query: 213 FTFPYSFSP 221
+
Sbjct: 499 TLWSRLVPM 507
>gi|217970403|ref|YP_002355637.1| DNA internalization-related competence protein ComEC/Rec2 [Thauera
sp. MZ1T]
gi|217507730|gb|ACK54741.1| DNA internalization-related competence protein ComEC/Rec2 [Thauera
sp. MZ1T]
Length = 835
Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/176 (13%), Positives = 51/176 (28%), Gaps = 28/176 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ P + + P G F + ++ I +
Sbjct: 368 RRIPPSRVLAIALLVVLVVDPWAVLSAG-----FWLSFGAVAVILAVLGGRVAPSAGW-- 420
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ S + L+ F +P+ +AN++AIP++SFV
Sbjct: 421 -----------------RAALRVQLAISFALVPLLLAQFQAVPLLSPLANLVAIPLVSFV 463
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
V P L+A + + L +P + ++ ++ P
Sbjct: 464 VTPLVLLA-IPWPIPLLLVPA---DFAAGWMMDFLAPLAALERAMIERAAPPPWLF 515
>gi|261405574|ref|YP_003241815.1| DNA internalization-like competence protein ComEC/Rec2
[Paenibacillus sp. Y412MC10]
gi|261282037|gb|ACX64008.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus sp. Y412MC10]
Length = 924
Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 55/159 (34%), Gaps = 19/159 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + + + F + + + + I +
Sbjct: 394 VSFQLSFIVTAGLMIF------VPKLMPLLAFLPRWLGGTVG---------ITVVAQLIS 438
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGL 153
I +F+ + + + AN++ +P++S VV+P G++++L+ + + V W
Sbjct: 439 FPLTIHYFNQVSLISVFANLILVPVISLVVLPLGMVSLLMGWVWMRGAGWLA-AVTEWLN 497
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I I ++ + + P +++ L +
Sbjct: 498 HITFRIVEWMNGSSVFMTLWPSPSLAWILCYFVVLYALL 536
>gi|260911485|ref|ZP_05918074.1| competence protein [Prevotella sp. oral taxon 472 str. F0295]
gi|260634414|gb|EEX52515.1| competence protein [Prevotella sp. oral taxon 472 str. F0295]
Length = 532
Score = 56.0 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 13/150 (8%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
I L L+D +F + + +I FY +Y S + + + I
Sbjct: 352 ACIVMLIANPST----LWDVSFQLSFLAVLSIIIFYPPLFSLYQSTTRWASLLRPVWGIV 407
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ + +F Y L++N+L +P+++ ++ I+
Sbjct: 408 ---------CVSIAAQVGTMPLIAYYFGRFSCYFLLSNLLILPLITLLLYATLASFIVQG 458
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
L N+ M W + + + IS
Sbjct: 459 APLLHNLVLDAMQWLATTVQTLVNGISSLP 488
>gi|319425960|gb|ADV54034.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella putrefaciens 200]
Length = 774
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 84/261 (32%), Gaps = 26/261 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ P+ + L P G F + ++ I Y ++ +
Sbjct: 296 KRFSSPWERLLFALFMVLLIDPLACLSAG-----FWLSFCALAIILYTLEAAPKVHQLTN 350
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
T + + + Q + + R ++G F I + L N+LA+P SF
Sbjct: 351 DITPLGRVRAGLLQFWSIQWRLSLGL------GFVQAVLFGGISAHSLWINMLAVPWFSF 404
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIG--RIPETSFV 181
VVIP + + + + L + + ++ + I + E+
Sbjct: 405 VVIPIAMAGFVCWWIGTALGFSWMGLLELSNWTLMPYGQLLAISGQLPIHWQVVSESVLA 464
Query: 182 TIVVEFLLMVFCK--------TNIRH---IGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
+ L V + R + + ++ ++ + S + + + + G
Sbjct: 465 LALCGLLGGVLWRYIPKQRLYWPWRFIVSLLFVPFLLSFLLKWLPLKSATWSMHLLDVGQ 524
Query: 231 LVA-LVDKNTLISNYSNPPSF 250
+A +++K Y +F
Sbjct: 525 GLAVVIEKEGRGLIYDTGAAF 545
>gi|110639347|ref|YP_679556.1| competence protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282028|gb|ABG60214.1| competence protein [Cytophaga hutchinsonii ATCC 33406]
Length = 626
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 53/140 (37%), Gaps = 14/140 (10%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
++ F + I + + + + + + + + +I
Sbjct: 332 WNIGFQLSVLAVIGILTLHQ----------YLSAHIQPQKKVYRYLVESV--SITICAQI 379
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-IPFGVMAWGL 153
+ ++ HF P+Y + AN+L IPI S V + A + +I L+ L + F W +
Sbjct: 380 TTLPVILYHFQSFPLYFIPANMLLIPI-STVALFASMFSIFLVGLGIHANWIFRSTQWLI 438
Query: 154 DIIIHIAHRISVAHNEFCIG 173
++ +A IS+ N
Sbjct: 439 ELFQQVAASISMLPNSSVAP 458
>gi|332762683|gb|EGJ92946.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri K-671]
Length = 398
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/221 (13%), Positives = 72/221 (32%), Gaps = 26/221 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 169 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 217
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 218 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPMQIVIFHGISLTSFIANLFAIPLVTFI 271
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L L+ + + L ++ + +
Sbjct: 272 TVPLILAAMVVHFSGPLILEQGLWFLADRSLALLFW---GLKSLPEGWINIVECWQWLSF 328
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ LMV + N R + ++ + +++ + PD
Sbjct: 329 SP--WFLMVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 367
>gi|299535732|ref|ZP_07049053.1| ComE operon protein 3 [Lysinibacillus fusiformis ZC1]
gi|298728932|gb|EFI69486.1| ComE operon protein 3 [Lysinibacillus fusiformis ZC1]
Length = 758
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/242 (15%), Positives = 73/242 (30%), Gaps = 30/242 (12%)
Query: 29 PAFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
PG +F F Y ++ Y I +
Sbjct: 307 LLEPGVIFQIGFQLSYLATVSLLY-------------------SGIIFKQTRTWLGRSFF 347
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIP 145
I L+ HF+ + + NI+ +P+ SFV++P +IA +L + L L N+
Sbjct: 348 ITFVCQLLVYPLLLHHFYELSLSSFFVNIVFVPLFSFVILPFNMIAFVLSYLSLPLANVL 407
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
F + I + + P + + +L+ F I+ ++
Sbjct: 408 FAGYEPLRKWLTEIIFSMQELPWQLWTPGKPTIWLSCVAMLSVLVSFYYLEIKRFRRAIL 467
Query: 206 GITIIILFTFPYSFSPD-----LLISEKGNLVALVDKNTLIS---NYSNPPSFIFSQWKS 257
+ I ++ + L +G+ + + + F WK
Sbjct: 468 ILVIPAIWIHLAPMLYNETKITFLNVGQGDSIIIELPFRRAVYVIDTGGVLRFEQELWKK 527
Query: 258 AL 259
A
Sbjct: 528 AD 529
>gi|325478617|gb|EGC81729.1| DNA internalization competence protein ComEC/Rec2-like protein
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 724
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/254 (14%), Positives = 79/254 (31%), Gaps = 32/254 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
K +D A + L P G F +F + + +I Y + +
Sbjct: 287 KKPFDKIKATLITAVLILLINPFAILNTG-FVLSFVASF----SILLIYPEFERKF---- 337
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
FL+ +F I + ++AN L +PI +
Sbjct: 338 -------------GKTYFRKIFTFTLAIQLGILTFLVYYFGRINILTILANFLVLPIFN- 383
Query: 125 VVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+ + I +L L I F + + + +++I +S + P
Sbjct: 384 ISMYLIFIVLLFSPLFKAFLKIGFLSLDFLVRSMLNITAVLSRVNISVIDFNKPNFLLAL 443
Query: 183 IVVEFLLMV------FCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
+L++ K NI + + I I+ L + S ++ +G+ + D
Sbjct: 444 YGFLLVLILVNLERKLIKRNINLL-MVSAMILILSLASDFNKVSYQMIDIGQGDSFLIND 502
Query: 237 KNTLISNYSNPPSF 250
+ P++
Sbjct: 503 RGNYYLIDVGGPNY 516
>gi|197248300|ref|YP_002145901.1| hypothetical protein SeAg_B0989 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197212003|gb|ACH49400.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
Length = 737
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 84/247 (34%), Gaps = 33/247 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y + +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQW---FPAPNGN 333
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + ++ + + + FH I V ++AN+ A+P ++FV
Sbjct: 334 FPRGVRWLLNLLH---------LQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ + I
Sbjct: 385 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGW--VNIDNRWQWL 439
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS-------PDLLISEKGNLVALV 235
++ +L ++ + N+ + + ++L ++P +L +G +A+V
Sbjct: 440 TLLPWLTLIAWRLNV-WRTCPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIV 498
Query: 236 DKNTLIS 242
+ +I
Sbjct: 499 RGDKVIL 505
>gi|262275602|ref|ZP_06053411.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Grimontia hollisae CIP 101886]
gi|262219410|gb|EEY70726.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Grimontia hollisae CIP 101886]
Length = 749
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 69/207 (33%), Gaps = 17/207 (8%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+F +F + + + + I+ R Y
Sbjct: 322 SVFSISFWLSFGAVFVL------------CMMTFSGQMNNAEGIRGYIWQLFRM--QCYL 367
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ F + L +N++A+PI+S + +P LIA+++ + + + +
Sbjct: 368 LVGMLPVMWVWFGGVSFLSLFSNLIAVPIVSLLTVPLILIALVMEWFPVAQLFWQMADMS 427
Query: 153 LDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
L I I + + + I + + I+ + + +G++ + +
Sbjct: 428 LWPITQILDKANMGWLDIQNIPLTFILAVMVILYGLTTFKLIRIPV--LGAVALLTLVSW 485
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKN 238
S L + + G+ +A++ +
Sbjct: 486 RHPKISPDSWRLDVFDVGHGLAVLIEK 512
>gi|314981252|gb|EFT25346.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL110PA3]
gi|315091821|gb|EFT63797.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL110PA4]
Length = 762
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 58/223 (26%), Gaps = 25/223 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W ++ + + +
Sbjct: 329 VGFWLSACATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGIVSTTGLVANLAAAPFVPPASALGMVTGLLAFIWPPLGTPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIG 206
II IAH + A + + + + + T + + I
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVLAGLCVGLALITPTVLARPWLTALAGLAVIAAM 493
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ L +P + + +G+ + P
Sbjct: 494 VVRPPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|219670323|ref|YP_002460758.1| ComEC/Rec2-related protein [Desulfitobacterium hafniense DCB-2]
gi|219540583|gb|ACL22322.1| ComEC/Rec2-related protein [Desulfitobacterium hafniense DCB-2]
Length = 872
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/216 (17%), Positives = 70/216 (32%), Gaps = 28/216 (12%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + I ++ + W SIK +F A+
Sbjct: 346 DIGFQLSFMATWGIL-------VLSADLKKMPWVRDWPKSIKSAFSMTCA------AQAA 392
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+I FH + + G++AN+LA+ +L + G++A+ L + I + L +
Sbjct: 393 TLPLMISAFHRLSIIGVLANLLALFVLGSI-FELGILAVFLSFIP--QIALPLFQVSLWL 449
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN--IRHIGSIMIGITIIILF 213
+ ++ + RIP + L V + +G +G I +
Sbjct: 450 LTGVSEFLMQL------ARIPWADVWVVNPGPLFWVCWYGWFLVLLVGKEKVGFMIRMGL 503
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
Y +I VAL+ P S
Sbjct: 504 GNLYRVGQPWII----RGVALMRPLGAALQKVMPQS 535
>gi|330830193|ref|YP_004393145.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas veronii B565]
gi|328805329|gb|AEB50528.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas veronii B565]
Length = 733
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 71/209 (33%), Gaps = 9/209 (4%)
Query: 47 SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE-IRANIGTYGSASASIFLIKHFH 105
+ + + P +YS+ ++ I + ++ + + + F
Sbjct: 302 AFVVLTFWDPFALYSAGFWLSFLSVAILLLVGYVHDKPGLWQLQLWLLLGLLPLQLALFE 361
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRI 163
I ++ N+LA+P+ +IP LI +LL L SL F + GL ++ I +
Sbjct: 362 GIAPLAMVINLLAVPLFCIAIIPLALIGVLLAPLSTSLAYGLFWLADLGLGWMLTILSWL 421
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPD 222
S + T+++ + + G ++L +P
Sbjct: 422 SDQLQLWWPLPGWWLPLCTLLLLLWFAAQWRPARWLWL----PGALALVLACWPAPARWQ 477
Query: 223 LLISEKGNLVALVDKNT-LISNYSNPPSF 250
L + + G +A++ Y +
Sbjct: 478 LRVLDVGQGLAVLISKGERAILYDTGDRY 506
>gi|160874821|ref|YP_001554137.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
baltica OS195]
gi|160860343|gb|ABX48877.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS195]
gi|315267060|gb|ADT93913.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS678]
Length = 783
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/347 (13%), Positives = 97/347 (27%), Gaps = 47/347 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + I L P G F + + I Y I ++ S
Sbjct: 296 KRFSTAWERLLFALFIVLLLDPLACLSAG-----FWLSFCALGIILYTLEIQPREFTPAS 350
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + ++ + + F + V+ L NILA+P SF
Sbjct: 351 T------RRARLRTGMMQFWAIQWRLSLGLGLLQAAL--FGGVSVHSLWMNILAVPWFSF 402
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-------FCIGRIPE 177
VVIP + + L + ++ ++ S++
Sbjct: 403 VVIPLAMAGFVCWWLG-TALGLSHFGLSSLGVLRLSDW-SLSPYAQLLDISRQLPAHWLA 460
Query: 178 TSFVTIVVEFLLM---VFCK-----------TNIRHIGSIMIGITIIILFTFPYSFSPDL 223
S + + F + V + ++ + + + + L++ + +
Sbjct: 461 LSDSLLALGFCALVGGVLWRYVPKHKHYIAWLSLLSLLFMPALLFCMTLWSPVQTHRWTM 520
Query: 224 LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + G +A+V + N FI+ +A F A V L+ K +
Sbjct: 521 HLLDVGQGLAVVIE-------KNGKGFIYDT-GAAFGDDFSYAERVILPFLKAKGIQEIN 572
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDI 330
I+ S V + + C+ I
Sbjct: 573 YIVVSHSDNDHA---GGAPVLMEAYPKALVITDVAGFSGQDCRPRQI 616
>gi|294793761|ref|ZP_06758898.1| DNA internalization-related competence protein ComEC/Rec2
[Veillonella sp. 3_1_44]
gi|294455331|gb|EFG23703.1| DNA internalization-related competence protein ComEC/Rec2
[Veillonella sp. 3_1_44]
Length = 742
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 60/170 (35%), Gaps = 21/170 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ Y A + + P LFD +F + + +
Sbjct: 389 RLYQAKQALCICAILCLVYDPF-----SLFDVSFQLSFGATYGLLIW------------- 430
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++I + + + + + +FH I + L+A + PIL
Sbjct: 431 GKVLYERIQWLPKWIKTPLVLCVS--AQLLILPLQLYYFHYISIASLLAACIVAPILDIS 488
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
+I + ++ ++S+ + + ++ L I +++ H + + + +G +
Sbjct: 489 IILIFISTVISYVMSISFL-WSLIDALLRISLYLNHVLGRSGSLLWLGMM 537
>gi|282850248|ref|ZP_06259627.1| ComEC/Rec2-like protein [Veillonella parvula ATCC 17745]
gi|282579741|gb|EFB85145.1| ComEC/Rec2-like protein [Veillonella parvula ATCC 17745]
Length = 741
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 60/170 (35%), Gaps = 21/170 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ Y A + + P LFD +F + + +
Sbjct: 388 RLYQAKQALCICAILCLVYDPF-----SLFDVSFQLSFGATYGLLIW------------- 429
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++I + + + + + +FH I + L+A + PIL
Sbjct: 430 GKVLYERIQWLPKWIKTPLVLCVS--AQLLILPLQLYYFHYISIASLLAACIVAPILDIS 487
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
+I + ++ ++S+ + + ++ L I +++ H + + + +G +
Sbjct: 488 IILIFISTVISYVMSISFL-WSLIDALLRISLYLNHVLGRSGSLLWLGMM 536
>gi|218248812|ref|YP_002374183.1| ComEC/Rec2-like protein [Cyanothece sp. PCC 8801]
gi|218169290|gb|ACK68027.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 8801]
Length = 748
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 62/182 (34%), Gaps = 24/182 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F S + I I K++ + + I + +
Sbjct: 361 GFQFSFLSTFGLIVTI-----------------PPLMKRLDWLPPAIATLI--AVPLAAT 401
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
+ F + Y + NI+ P+++ + I + + + I L + ++ +
Sbjct: 402 IWVLPLSLYKFSILATYSIPTNIITSPLITAISIGGMISSAIAFISPILGSFVVKILYYP 461
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVF---CKTNIRHIGSIMIGIT 208
+ +I + I + +G++ + I V +L+ + + +G+
Sbjct: 462 VYFLIKLLEIIVHLPGSYYAVGKLSLGVMLLIYVILVLIWLNPFWQRYWKLAALFSLGLI 521
Query: 209 II 210
I+
Sbjct: 522 IL 523
>gi|120599347|ref|YP_963921.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. W3-18-1]
gi|146292656|ref|YP_001183080.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella putrefaciens CN-32]
gi|120559440|gb|ABM25367.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. W3-18-1]
gi|145564346|gb|ABP75281.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella putrefaciens CN-32]
Length = 774
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 11/144 (7%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ P+ + L P G F + ++ I Y ++ +
Sbjct: 296 KRFSSPWERLLFALFMVLLIDPLACLSAG-----FWLSFCALAIILYTLEAAPKVHQLTN 350
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
T + + + Q + + R ++G F I + L N+LA+P SF
Sbjct: 351 DITPLGRVRAGLLQFWSIQWRLSLGL------GFVQAVLFGGISAHSLWINMLAVPWFSF 404
Query: 125 VVIPAGLIAILLMILSLDNIPFGV 148
VVIP + + + +
Sbjct: 405 VVIPIAMAGFVCWWIGTALGFSWM 428
>gi|302346678|ref|YP_003814976.1| ComEC/Rec2-like protein [Prevotella melaninogenica ATCC 25845]
gi|302150376|gb|ADK96637.1| ComEC/Rec2-like protein [Prevotella melaninogenica ATCC 25845]
Length = 514
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 58/190 (30%), Gaps = 21/190 (11%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ I L LFD F + + +I FY + + + + I
Sbjct: 337 ALTAIVMLVSNPN----SLFDIGFQLSFISVWSILLFYPLIYELIPLQQKKSLLV--IRW 390
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ + + + +F + +++++A+P +V +
Sbjct: 391 LWGMIA------VSLAAQLGTAPLIAFYFGRVSTIFAVSSLIAVPCTMLIV----SASFC 440
Query: 136 LMILSLDNIPFGVMAWGL----DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
L++LS + + + + H ++ I + T F + F+LM
Sbjct: 441 LLLLSPFPSLSSFIGKCICVITEGLNSSLHWLASLP-CVSIEDVHVTIFQLFIYYFMLMS 499
Query: 192 FCKTNIRHIG 201
G
Sbjct: 500 IWILWSFLAG 509
>gi|114777002|ref|ZP_01452022.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Mariprofundus ferrooxydans PV-1]
gi|114552523|gb|EAU54983.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Mariprofundus ferrooxydans PV-1]
Length = 824
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 66/184 (35%), Gaps = 11/184 (5%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ + +A+ + + ++ ++ I + + +
Sbjct: 353 LSLWLSFSATAALLLW----AVQSRADHALQAAGRRQRLITAITTLAW---VSLVATLAT 405
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM---AWGL 153
+ F +PVY + AN+L +PI + +V+PA L+A L + +L + G M
Sbjct: 406 LPITLATFGRLPVYSIPANLLLVPIYALLVMPAALLAELTALFNLPTLAGGFMQIAGMAA 465
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ +H+ R++ P + L + R + + + + +I L
Sbjct: 466 EAGLHLLQRMTHLPAGNLWAVHPPLWLGGLYLAGMLFAGRQALHKRKLQAALSALLVIGL 525
Query: 213 FTFP 216
++
Sbjct: 526 YSSA 529
>gi|258647961|ref|ZP_05735430.1| ComEC/Rec2 family protein [Prevotella tannerae ATCC 51259]
gi|260851801|gb|EEX71670.1| ComEC/Rec2 family protein [Prevotella tannerae ATCC 51259]
Length = 688
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/223 (10%), Positives = 64/223 (28%), Gaps = 22/223 (9%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
++ + Y+ + + L P+ LFD + + +G PK+ +
Sbjct: 324 ALRRDYNALNSLSLALIGILLVSPTA-----LFDMGLQLSFL--ALLGILLIAPKLAPPT 376
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
W + + + +F+ + GL L IP
Sbjct: 377 WVSRFWGLNFVYDL---------LRTSFCAQILTLPLIAYYFNSFSLVGLFTGWLVIPFA 427
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFV 181
++ + + + + ++ +D ++ + +S + +
Sbjct: 428 YAIL--LLALLFFCLPF-VQTVLVSLLNGTMDTMLQCLNFLSSWDYASITVVPGKVFTLL 484
Query: 182 TIVVEFLLMVFCKTNIR--HIGSIMIGITIIILFTFPYSFSPD 222
V F L+ + + G + + I + + D
Sbjct: 485 IYGVIFFLLTYLQNRRARNLYGIACLLLCGAIYYIMYTPPAYD 527
>gi|78044560|ref|YP_359264.1| DNA internalization-related competence protein ComEC/Rec2
[Carboxydothermus hydrogenoformans Z-2901]
gi|77996675|gb|ABB15574.1| DNA internalization-related competence protein ComEC/Rec2
[Carboxydothermus hydrogenoformans Z-2901]
Length = 725
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/239 (12%), Positives = 74/239 (30%), Gaps = 32/239 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + Y P L P LF F Y I + +P
Sbjct: 286 FFLGRDYQPVYHLFLSAFFYLLIKPQE-----LFSAGFLLSYLATLGI-FLIGLP----- 334
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
K + + I +G + H+ +IAN+L +P+
Sbjct: 335 ------LAEKLKLYLPSYLADTIGVTVG--AQILTEPIVFYHYSLFATLSIIANLLVVPL 386
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+++ +G+ + L L + +++ ++++ + P + +
Sbjct: 387 TG-IIMASGIFGLFLSPL------RHLTELLTVFTLNMNSQMALIPGATIAVKKPFFTLI 439
Query: 182 T-----IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+ + + +V K I + +I I+ +F P + ++ A++
Sbjct: 440 FLFYCWLFLGYFWLV-KKEKIDIVKFCVIAFLILGIFLVPKEHGKTVFLAVGQGDAAVI 497
>gi|217973837|ref|YP_002358588.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
baltica OS223]
gi|217498972|gb|ACK47165.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS223]
Length = 783
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 79/268 (29%), Gaps = 37/268 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + I L P G F + + I Y I ++ S
Sbjct: 296 KRFSTAWERLLFALFIVLLLDPLACLSAG-----FWLSFCALGIILYTLEIQPRAFTPAS 350
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + ++ + + F + V+ L NILA+P SF
Sbjct: 351 T------RRARLRTGMMQFWAIQWRLSLGLGLLQAAL--FGGVSVHSLWMNILAVPWFSF 402
Query: 125 VVIPAGLIAILLM----ILSLDNIPFGVMAWGLDI----------IIHIAHRISVAHNEF 170
VVIP + + L L + + GL + ++ I+ ++ H
Sbjct: 403 VVIPLAMAGFVCWWLGTALGLSHFGLSSLG-GLRLSDWSLSPYAQLLDISQQLPA-HWLA 460
Query: 171 CIGRIPETSFVTIVVEFLLMVFCK-----TNIRHIGSIMIGITIIILFTFPYSFSPDL-- 223
+ F +V L K + + + + + + + +
Sbjct: 461 LSDSLLALGFYALVGGVLWRYVPKHKNYIAWLSLLSLLFMPALLFCMTLWSPVQTHRWTM 520
Query: 224 -LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ L +++KN Y +F
Sbjct: 521 HLLDVGQGLTVVIEKNGRGFIYDTGAAF 548
>gi|331090749|ref|ZP_08339596.1| DNA internalization-like competence protein ComEC/Rec2
[Lachnospiraceae bacterium 2_1_46FAA]
gi|330399857|gb|EGG79516.1| DNA internalization-like competence protein ComEC/Rec2
[Lachnospiraceae bacterium 2_1_46FAA]
Length = 732
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 49/179 (27%), Gaps = 22/179 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ YD + + + P FD F + + I I + ++ E
Sbjct: 266 RVYDLPTSLSVAAAVIICRSPQY-----FFDAGFLLSFGAVLGIILLKPILEKLFPCEKK 320
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ F +P Y L+ NI IP++ F+
Sbjct: 321 WAEGI----------------CFSVAIQLFLFPVTLYFFFEVPTYALLLNIFVIPLMPFL 364
Query: 126 VIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+ A + I SL + L + + + + P+ V +
Sbjct: 365 LGMALFGVAICFIFQSLGVWILKGSGFFLTLYNRLCELAMEFPHPRIVLGKPKWWQVVV 423
>gi|283795069|ref|ZP_06344222.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium sp. M62/1]
gi|291077410|gb|EFE14774.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium sp. M62/1]
Length = 831
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 53/179 (29%), Gaps = 35/179 (19%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + + AIG+ + S + +
Sbjct: 344 AFQLSFGAVFAIGWA----------------GKELTDSFRCRRGWTRALAVSAAIQLVTG 387
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGLIAILLMILS-----------LDN 143
++ HF PVYG++ N + IP++++VV + + ++ + S
Sbjct: 388 PLVLWHFFEYPVYGILLNFIVIPLMTYVVGAGLAGLFLGLMAELFSACSFSAVFEGLFGL 447
Query: 144 IPFGVMAWG---LDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ G M L + + +GR + L ++ +T R
Sbjct: 448 LAAGSMGTCHYILAFYEWLCRAVGKLPIYSLILGRPALWKLAAYYL-MLSVLLWRTAKR 505
>gi|118444707|ref|YP_878576.1| ComE operon protein 3 [Clostridium novyi NT]
gi|118135163|gb|ABK62207.1| ComE operon protein 3 [Clostridium novyi NT]
Length = 446
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 43/134 (32%), Gaps = 20/134 (14%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ YD + + I L P D F+ + I + + +
Sbjct: 254 CFYRTYDSLSSLSLAAIIILLMKPYYVV-----DIGFNLSFLATLGIILYNKKIRRV--- 305
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + + + + + + I V+ ++ N+L +P+
Sbjct: 306 ----------LYKLPNKINESLSMTFS--AQVFSMPYAMCTLNNISVFFILGNLLLVPLY 353
Query: 123 SFVVIPAGLIAILL 136
S +++ L+ ++L
Sbjct: 354 SIIILLGNLVIVVL 367
>gi|126173913|ref|YP_001050062.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS155]
gi|125997118|gb|ABN61193.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS155]
Length = 783
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/268 (13%), Positives = 75/268 (27%), Gaps = 37/268 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + I L P G F + + I Y I ++ S
Sbjct: 296 KRFSTAWERLLFALFIVLLLDPLACLSAG-----FWLSFCALGIILYTLEIQPRAFTPAS 350
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + ++ + + F + V+ L NILA+P SF
Sbjct: 351 T------RRARLRTGMMQFWAIQWRLSLGLGLLQAAL--FGGVSVHSLWMNILAVPWFSF 402
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-------FCIGRIPE 177
VVIP + + L + ++ ++ S++
Sbjct: 403 VVIPLAMAGFVCWWLG-TALGLSHFGLSSLGVLRLSDW-SLSPYAQLLDISQQLPAHWLA 460
Query: 178 TSFVTIVVEFLLM---VFCK---------TNIRHIGSIMIGITIIILFTFPYSFSPDL-- 223
S + + F + V + + + + I + + + +
Sbjct: 461 LSDSLLALGFCALVGGVLWRYVPKHKHYIAWLSLLSLLFIPALLFCMTLWSPVQTHRWTM 520
Query: 224 -LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ L +++KN Y +F
Sbjct: 521 HLLDVGQGLTVVIEKNGRGFIYDTGAAF 548
>gi|294141524|ref|YP_003557502.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella violacea DSS12]
gi|293327993|dbj|BAJ02724.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella violacea DSS12]
Length = 783
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 81/261 (31%), Gaps = 23/261 (8%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI-YSSE 63
+ + I + P G F + + I S E
Sbjct: 312 KRFSSSWERLLYALFIILVLDPLTCMSAG-----FWLSFSALGIIFLTLSQWTKFVPHQE 366
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ +K + + R ++G + I VYGL+ N++ +P S
Sbjct: 367 EASGARLNVKHKLKLFWSVQWRLSLGLGLLQALLFGG------ISVYGLLFNLVLVPWFS 420
Query: 124 FVVIPAGLIAILLMILS----LDNI-PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+VIP + + L +D F ++ L + I +
Sbjct: 421 LIVIPVSFLCFSIWALGQVFSMDFPQIFALVDMSLVPMSIGFSMIESLPGAWMSVSGQTI 480
Query: 179 SFVTIV-VEFLLMV-FCKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGN-LV 232
+ ++ + +L+ R + I +G+ ++ P L + + G L
Sbjct: 481 ACLSFSILGLILLCRVSHPRWRLVSLILFMPLGLNVLFGLIAPRQSEWRLHLLDVGQGLS 540
Query: 233 ALVDKNTLISNYSNPPSFIFS 253
A+++K+ Y ++ +
Sbjct: 541 AVIEKSGKALIYDTGAAYGAN 561
>gi|16329718|ref|NP_440446.1| ComE [Synechocystis sp. PCC 6803]
gi|1652202|dbj|BAA17126.1| ComE [Synechocystis sp. PCC 6803]
Length = 709
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 19/195 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I + +++ + I + S
Sbjct: 360 LGFQLSFLATLGIVVMVPPLQ-------------QRLDFLPGKIAGVI--AVPLAASVWT 404
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ L++ F L NIL P+L+ + + + A+ +I L + ++A+
Sbjct: 405 TPILLQQFGYFIPAALPLNILITPLLALLSLGGMVSALCALIFPPLGSATGWLLAFPARW 464
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI--MIGITIIILF 213
++ IA + +G + V + F L+ R G + + TII+
Sbjct: 465 LMAIADQFQQLP-TVAVGEVGLGQVVIMYGAFCLIWAFPWWRRRWGLVSTFLLGTIILPL 523
Query: 214 TFPYSFSPDLLISEK 228
F +L I +
Sbjct: 524 IFSLQTRVELTIFDS 538
>gi|120610039|ref|YP_969717.1| DNA internalization-like competence protein ComEC/Rec2 [Acidovorax
citrulli AAC00-1]
gi|120588503|gb|ABM31943.1| DNA internalization-related competence protein ComEC/Rec2
[Acidovorax citrulli AAC00-1]
Length = 948
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/299 (9%), Positives = 75/299 (25%), Gaps = 21/299 (7%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L F + + + + + ++ +
Sbjct: 485 ALLQAGFWLSFVAVGVLFA--------SDAATPPEVVPAARAAGRLRARVLSLLREQGVV 536
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + + + F I V G AN++AIP ++ VV P L+ +L L + A
Sbjct: 537 TLALTPLTVLLFGQISVVGFAANLVAIPWMTLVVTPLALLGVLWAPL------WSAAAAC 590
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
L ++ + +++ + + + ++
Sbjct: 591 LRPFAEGLQWLAAWPWATVSLPAAPLWAGVAGMAGGMLLVMRLPWALRLMGLPLLLPVLW 650
Query: 213 FTF--PYSFSPDLLISEKGNLVALV-DKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
+ P + +LL + G A++ Y P + + P +
Sbjct: 651 WHPARPGAGQFELLAPDVGQGSAVLVRTAGHALLYDAGPRYG----MQSDAGDRVLVPLL 706
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLS 328
+ + + + + R + C+
Sbjct: 707 RAGGERLDRVMLSHRDTDHTGGAAAVLAAHPGADLWGSLEPGHPLEARGARVITRCEAG 765
>gi|119897803|ref|YP_933016.1| putative DNA uptake/competence protein [Azoarcus sp. BH72]
gi|119670216|emb|CAL94129.1| putative DNA uptake/competence protein [Azoarcus sp. BH72]
Length = 769
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 84/292 (28%), Gaps = 32/292 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ P L P G F + + AI +
Sbjct: 319 LMLGREVAPSRVLALAVLGVLLVDPWAVLAAG-----FWLSFGAVGAILVLAGGRIGPAA 373
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + + + L+ FH P+ +AN +AIP+
Sbjct: 374 RWS-------------------AAVRLQLGITLATVPLLVALFHSFPLVSPLANAVAIPL 414
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+SFVV P L+A++L L V A +D + +A +
Sbjct: 415 VSFVVTPLALLAMVLPWDLLLEAAHWVTARVMDWSVLLA----DLPFALWRQAAAPGWAL 470
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS----PDLLISEKGNLVALVDK 237
M + ++ + +++ + P +L G V +
Sbjct: 471 AAGAVGAWMWLLPRPLPGRAGALLMVGLLLGWQPPRPAPGSFRATVLDVGNGLAVHVQTA 530
Query: 238 NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSM 289
+ + PP S ++ P+ A V + D+ + +
Sbjct: 531 THDLLYDAGPPYGPLSDAGERVVLPYLAANGVARLDVLVLSHDDADHSGGAG 582
>gi|90579510|ref|ZP_01235319.1| hypothetical Rec2-related protein [Vibrio angustum S14]
gi|90439084|gb|EAS64266.1| hypothetical Rec2-related protein [Vibrio angustum S14]
Length = 769
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 75/205 (36%), Gaps = 8/205 (3%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
++ +F + + + F + + ISS A I +
Sbjct: 333 SIYSASFWLSFYAVGVLILF----TLSQRYFTGRVVFDNSISSNNLKVFLLQLAKIQLWL 388
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAW 151
F I + IANI+A+P++S + +P L+A+L + + ++ + W
Sbjct: 389 LVLMLPIQWLWFGGISLAAPIANIVAVPLVSTITVPLVLLALLTLWFPAISSLFWQCADW 448
Query: 152 GLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
L I+ + + V + V M+ ++ + + S ++ IT+
Sbjct: 449 SLIPIVEGIQWLEGAWYPLSVHLTPLLWGIVIVFVA--WMLLPLSSFKWLYSSVVVITLC 506
Query: 211 ILFTFPYSFSPDLLISEKGNLVALV 235
P +L+ + G+ +A++
Sbjct: 507 WFINEPVKSHWKMLVIDVGHGLAVL 531
>gi|91204982|ref|YP_537337.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
gi|91068526|gb|ABE04248.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
Length = 393
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 2 LSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+SI KKY I +A+L P PG +DF F +Y I A GY S PK+I
Sbjct: 135 ISIPKKYLQKVRVNDYIALLAKLYKPQNSILPGGYDFGFYAYLADIGANGYAMSEPKIIA 194
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+E+ I I+ N + +G+ A+ L+
Sbjct: 195 RNETTID---SFIYKIRIFIYNNLINKLGSDKGNFAAAILL 232
Score = 42.9 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 6/58 (10%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
P + I P P F +F + ++ ++ ++ ++
Sbjct: 336 PIRSLAIAAFIILSLNPEYIFHPS-FQLSFIAVLSLVAGYEFYLKNSWLLGEKKAFLE 392
>gi|320162366|ref|YP_004175591.1| putative competence protein ComEC [Anaerolinea thermophila UNI-1]
gi|319996220|dbj|BAJ64991.1| putative competence protein ComEC [Anaerolinea thermophila UNI-1]
Length = 747
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/304 (9%), Positives = 76/304 (25%), Gaps = 20/304 (6%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+D F + + + S + + + ++ + I + A
Sbjct: 346 WDVGFQLSFSATLGLLLYASRLEGWARRITARFLPVRVAGAVAGALGEYILFTL--AAQA 403
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGL 153
+ ++ HF + + L+AN L +P + +++ L + L ++
Sbjct: 404 ATLPVILSHFGRLALSTLLANPLILPAQAPLLLFGEASLALGAVWQPLGHLLALPAWALA 463
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVF-----------CKTNIRHIG 201
+ + ++ + + P + + F + +G
Sbjct: 464 SYTLEVVAWMARLPLGAWAVPAPPLWVVILFYLWFSATALRAMGLPRLDTSLRPTWLLLG 523
Query: 202 SIMIGITIIILFTFPYSFSPDLLIS--EKGNLVALVDKNTLISNYSNPPSFIFSQWKSAL 259
I + L +S + L + + SQ
Sbjct: 524 LFGIAAVLWRQVLAGGDGKLHLWVSVQQDSVLTMVQTPGGETLLINGLGQARESQAFLGK 583
Query: 260 ITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKD 319
+ P P + +F + + C G + +R
Sbjct: 584 VLPPFNPPLAWWILASPSAAEVQGGLGALA---RFAVRQAALCGGLPSDRTTRTLEERLA 640
Query: 320 MIRL 323
Sbjct: 641 AAGT 644
>gi|313888961|ref|ZP_07822621.1| DNA internalization competence protein ComEC/Rec2-like protein
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845134|gb|EFR32535.1| DNA internalization competence protein ComEC/Rec2-like protein
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 757
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 42/140 (30%), Gaps = 23/140 (16%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQS 79
I L P ++ + Y I + + Y I +
Sbjct: 294 IILLINPMA-----IYSISLLLSYGAIFGLIFVYPNL----------------IERVSSR 332
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
L S + +F + +AN++ +PI S ++ L+ + +
Sbjct: 333 SLISKSFVGTLSVIISGFPLINYYFSGFSILVFLANLIIVPIYSLIISLGFLMGLGIFPC 392
Query: 140 SLDNIPFGVMAW--GLDIII 157
L +M GL+ ++
Sbjct: 393 LLGRFLNLLMNATYGLESLL 412
>gi|88705097|ref|ZP_01102809.1| DNA internalization-related competence protein ComEC/Rec2
[Congregibacter litoralis KT71]
gi|88700792|gb|EAQ97899.1| DNA internalization-related competence protein ComEC/Rec2
[Congregibacter litoralis KT71]
Length = 776
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/246 (10%), Positives = 70/246 (28%), Gaps = 32/246 (13%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
S+ + L P +F + + +F
Sbjct: 321 SLGRNVKATEMLPIAAMALFLLNPVSLLA-----ASFWLTLGAVGLLLWF---------- 365
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + + + + A + + F G + N++A+P+
Sbjct: 366 -TSWRGRSSWLRDLWDAQGYMLLAML---------PLGLFWFQEAGSIGAVVNLVAVPLT 415
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA-----HNEFCIGRIPE 177
+F+V+P L A++L L + ++ W ++ + +
Sbjct: 416 TFLVVPLLLCAVVLAPL-WYALADHLLEWAAIVLATLWSALEYWEPMLGPWGVLRVSPGN 474
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS-EKGNLVALVD 236
+ +++ + R ++ + + I + F L +G V L
Sbjct: 475 VQLFLALFGVVILALPRFPGRIFSVGLLLVPLSIPDSRGDDFVELLFFDVGQGTAVLLRQ 534
Query: 237 KNTLIS 242
++ +
Sbjct: 535 RDKALL 540
>gi|126439024|ref|YP_001059607.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 668]
gi|126218517|gb|ABN82023.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 668]
Length = 856
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 68/266 (25%), Gaps = 40/266 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 353 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 407
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 408 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFRRLARRVRDAARAQFAVTIALA 467
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 468 PLTVLWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHALVQALM 526
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + A + P+ + + + + +
Sbjct: 527 RLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCAAPLAWLPLV 580
Query: 218 SFSPDLLISEKGNLVALVDKNTLISN 243
+ +P L AL
Sbjct: 581 APAPLAPPDGAFRLTALDVGQGSAVL 606
>gi|237755649|ref|ZP_04584261.1| ComEC/Rec2-related protein [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237692186|gb|EEP61182.1| ComEC/Rec2-related protein [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 573
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 26/161 (16%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LF +F + + I + + K + W+K+ +
Sbjct: 300 SLFSVSFQLSFLAVFGIILTFEVFKDL--------ENWQKV------------LISSLFA 339
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD-NIPFGVMAW 151
+ ++ +F + A PI S + P I++L ++ + + +M +
Sbjct: 340 TLFTLPVILYYFGNFSPTTIFA----TPIASLPLYPLLTISVLNLLTGFEISFLVKIMDF 395
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I I I S + G P + I + L +
Sbjct: 396 FTLIFIQIVKFFSSL-GLYFTGFSPSIWLIFIYLATLTFIL 435
>gi|238784532|ref|ZP_04628540.1| hypothetical protein yberc0001_26090 [Yersinia bercovieri ATCC
43970]
gi|238714595|gb|EEQ06599.1| hypothetical protein yberc0001_26090 [Yersinia bercovieri ATCC
43970]
Length = 736
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/260 (10%), Positives = 77/260 (29%), Gaps = 27/260 (10%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+ LS P L + ++ +Y + + ++
Sbjct: 294 ALILLSEPLAILSDSL-----WLSCLAVFSLLCWYHWVPISARFRVGWAGVVIRCFHLQF 348
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
I FH + ++ + AN+ ++P++S + +P L+A+ +
Sbjct: 349 GM------------MLLLMPLQISLFHGVSLFSIPANLWSVPLISLLTVPCVLLALAFTL 396
Query: 139 LSLDNIPFGVM-AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TN 196
L F M L +++ +++ TS +L ++ +
Sbjct: 397 LPTTAGVFWFMADMSLTVVLLPLNQLKA-----GWLHTGATSVALGYGGWLAILIWRFQW 451
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLISNYSNPPSFIFS 253
R ++ + + ++ + L ++++ + +
Sbjct: 452 WRSYPIGIMVLCVNLVLFSHRRDEYHWRVDMLDIGHGLAMVIEREGKAIIFDTGNRWSTG 511
Query: 254 QWKSALITPFHEAPHVQKED 273
+ ++ P+ + E
Sbjct: 512 SMAAVVVLPYLRWRGITVEQ 531
>gi|256027140|ref|ZP_05440974.1| COME operon protein 3 [Fusobacterium sp. D11]
gi|289765121|ref|ZP_06524499.1| COME operon protein 3 [Fusobacterium sp. D11]
gi|289716676|gb|EFD80688.1| COME operon protein 3 [Fusobacterium sp. D11]
Length = 396
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 17/134 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+F +F Y + AI Y + + I +KK+ + T
Sbjct: 244 IFSVSFQLSYGAMIAIIYIFPYIRKI---------NYKKLKILDYIL-------FTTTIQ 287
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +F+ I +I+N++ +P+ SF +I IA+ L L + ++
Sbjct: 288 IFLMPITVYYFNTIQFLSVISNLILLPLASFYII-VNYIALFLENFYLSFLLKPIVEILY 346
Query: 154 DIIIHIAHRISVAH 167
I+I++ S
Sbjct: 347 KILIYLIDFFSELP 360
>gi|237743580|ref|ZP_04574061.1| COME operon protein 3 [Fusobacterium sp. 7_1]
gi|260497928|ref|ZP_05816046.1| COME operon protein 3 [Fusobacterium sp. 3_1_33]
gi|229433359|gb|EEO43571.1| COME operon protein 3 [Fusobacterium sp. 7_1]
gi|260196543|gb|EEW94072.1| COME operon protein 3 [Fusobacterium sp. 3_1_33]
Length = 396
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 17/134 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+F +F Y + AI Y + + I +KK+ + T
Sbjct: 244 IFSVSFQLSYGAMIAIIYIFPYIRKI---------NYKKLKILDYIL-------FTTTIQ 287
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +F+ I +I+N++ +P+ SF +I IA+ L L + ++
Sbjct: 288 IFLMPITVYYFNTIQFLSVISNLILLPLASFYII-VNYIALFLENFYLSFLLKPIVEILY 346
Query: 154 DIIIHIAHRISVAH 167
I+I++ S
Sbjct: 347 KILIYLIDFFSELP 360
>gi|284054879|ref|ZP_06385089.1| ComEC/Rec2-related protein [Arthrospira platensis str. Paraca]
Length = 449
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 57/159 (35%), Gaps = 17/159 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + ++ +G ++P ++ S + + + I + +
Sbjct: 18 DLGFQFSF--LATLGLLVTVPPLMRS-----------LQWLPPVIASCI--AVPIAAAIW 62
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-IPFGVMAWGLD 154
I F+ + + + NILA+P ++ + + L A++ +I + + + L
Sbjct: 63 ILPLQIYVFNLVSPFSIFVNILAVPFITVITLGGMLTAVVALIWPWAASVLVSGLYYPLQ 122
Query: 155 IIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVF 192
+I+I + +G + + + + +
Sbjct: 123 GLIYIVEFFNNLPGNSIAVGTLSLAQLIGLYSINIWLCL 161
>gi|169829292|ref|YP_001699450.1| ComE operon protein 3 [Lysinibacillus sphaericus C3-41]
gi|168993780|gb|ACA41320.1| ComE operon protein 3 [Lysinibacillus sphaericus C3-41]
Length = 718
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/249 (15%), Positives = 82/249 (32%), Gaps = 44/249 (17%)
Query: 29 PAFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
PG +F F Y +++ Y + + + + +SF
Sbjct: 267 LLEPGVIFQIGFQLSYLAAASLVY-------------SSYIFTQTSNWLSRSFFVTFVCQ 313
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIP 145
+ Y L+ HF+ + + NI+ +P+ SFV++P ++A+ L + L L N+
Sbjct: 314 LLVY------PLLLHHFYELSISSFFVNIIFVPLFSFVILPFNIVALALTYISLPLANLL 367
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGS 202
F + + ++ + I + P + + +L ++
Sbjct: 368 FAGYEPLRNGLTNVIYLIQALPFQLWSPGKPSVWLCCLAMLSVLTCFYFLETKRFKNAIL 427
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGN------------LVALVDKNTLISNYSNPPSF 250
+++ I I + + G V ++D L+ F
Sbjct: 428 VLLFPAICIHLSPMLYSDTKITFLNVGQGDCTVIELPFREAVYVIDAGGLL-------RF 480
Query: 251 IFSQWKSAL 259
QWK A
Sbjct: 481 EQEQWKKAN 489
>gi|126451566|ref|YP_001066889.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 1106a]
gi|242314940|ref|ZP_04813956.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 1106b]
gi|126225208|gb|ABN88748.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 1106a]
gi|242138179|gb|EES24581.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 1106b]
Length = 856
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 68/266 (25%), Gaps = 40/266 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 353 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 407
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 408 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFRRLARRVRDAARAQFAVTIALA 467
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 468 PLTVLWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHALVQALM 526
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + A + P+ + + + + +
Sbjct: 527 RLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCAAPLAWLPLV 580
Query: 218 SFSPDLLISEKGNLVALVDKNTLISN 243
+ +P L AL
Sbjct: 581 APAPLAPPDGAFRLTALDVGQGSAVL 606
>gi|16759853|ref|NP_455470.1| hypothetical protein STY0984 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142374|ref|NP_805716.1| hypothetical protein t1951 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|25355640|pir||AE0614 probable competence-related protein STY0984 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502146|emb|CAD05383.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138004|gb|AAO69565.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 754
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 299 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 353 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 402 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTL 458
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 459 LPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 518
Query: 239 TLIS 242
+I
Sbjct: 519 KVIL 522
>gi|239994207|ref|ZP_04714731.1| DNA internalization-related competence protein ComEC/Rec2
[Alteromonas macleodii ATCC 27126]
Length = 864
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/224 (10%), Positives = 71/224 (31%), Gaps = 30/224 (13%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + I W + ++++ + +
Sbjct: 420 SFYLSIGAVLCI------------------WFLVVVWGLQRAPWYVSLFKLQVALTVIMM 461
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW------ 151
+ F ++ N++A+P++S + +P LI++L++ + V
Sbjct: 462 PLTLIWFGSASFVAVVTNLIALPVISLL-LPICLISLLVLHFAELPFAQQVTGMLMHYSD 520
Query: 152 -GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
L ++ + + +S + + + ++V F + + + I ++ + +
Sbjct: 521 VCLGYLLSLLNVLSQFSGSAINFYVSIGAALCLIVAFFIFLLPTWRYKAICVALLLLPSL 580
Query: 211 IL---FTFPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSF 250
+ + + L + + G A+ V + F
Sbjct: 581 SIFQKWLPTNESAWALHVFDAGQASAIAVTAGGRAMIIDSGAQF 624
>gi|52081107|ref|YP_079898.1| hypothetical protein BL02087 [Bacillus licheniformis ATCC 14580]
gi|52786485|ref|YP_092314.1| hypothetical protein BLi02750 [Bacillus licheniformis ATCC 14580]
gi|319644936|ref|ZP_07999169.1| late competence protein ComEC [Bacillus sp. BT1B_CT2]
gi|18266366|gb|AAL67526.1|AF459916_3 late competence protein ComEC [Bacillus licheniformis]
gi|52004318|gb|AAU24260.1| ComEC [Bacillus licheniformis ATCC 14580]
gi|52348987|gb|AAU41621.1| ComEC [Bacillus licheniformis ATCC 14580]
gi|317392745|gb|EFV73539.1| late competence protein ComEC [Bacillus sp. BT1B_CT2]
Length = 795
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 70/250 (28%), Gaps = 31/250 (12%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
K + + L P F F +F+ +
Sbjct: 300 KKNFKSADVISIACLGLLLYHPY-LLFQAGFQLSFAVSFV-------------------- 338
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ K + ++ L+ HF + N+ IP+ F
Sbjct: 339 ---FILSKEILTRPKSRISQLLLGSFLAQLASLPILLFHFQEFSFLSTLMNLFFIPLYIF 395
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR----ISVAHNEFCIGRIPETSF 180
+++P ++L I + A LD ++ +H+ +S A P
Sbjct: 396 IIMPLSFGSLLAFICF--HPLGEAAAAVLDRLLVWSHQAVKTVSAADVSVFSAAKPPDLL 453
Query: 181 VTIVVEFLLMVFCKTNIRH-IGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ + + + ++MI ++ ++ P L + ++ + ++
Sbjct: 454 LFFYFTAIFLFLLLLEKEMSLRAVMIPSGLLAAVFVIHACLPQLAGEGEVTMLDIGQGDS 513
Query: 240 LISNYSNPPS 249
+ +
Sbjct: 514 MYVSAPGQNG 523
>gi|308069981|ref|YP_003871586.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus polymyxa E681]
gi|305859260|gb|ADM71048.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus polymyxa E681]
Length = 924
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 56/181 (30%), Gaps = 21/181 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
A L P + L +F + + + + K + K I
Sbjct: 373 ALLMLIWNPYY--LLSVSFQLSFLVTGGLLIYMPLMK---------PFFAKWPFLIGGEV 421
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
I + + +F+ + AN + +P+++++V+P G +A+ L L
Sbjct: 422 AITIT------AQLVSFPMTVFYFNQFSLLSFAANFVLVPLITYIVLPLGTVAMGLSFLW 475
Query: 141 LDN--IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE--TSFVTIVVEFLLMVFCKTN 196
D I D+ + ++V I + ++ KT
Sbjct: 476 EDGARIFAWPAEQLNDLTFLLVKWLNVDDAYVSIWPSSSILWVMAYYAALYSVLYCLKTW 535
Query: 197 I 197
+
Sbjct: 536 L 536
>gi|213424600|ref|ZP_03357383.1| hypothetical protein SentesTyphi_02291 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
Length = 754
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 299 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 353 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 402 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTL 458
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 459 LPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 518
Query: 239 TLIS 242
+I
Sbjct: 519 KVIL 522
>gi|213852005|ref|ZP_03381537.1| hypothetical protein SentesT_03467 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 754
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 299 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 353 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 402 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTL 458
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 459 LPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 518
Query: 239 TLIS 242
+I
Sbjct: 519 KVIL 522
>gi|267992721|gb|ACY87606.1| hypothetical protein STM14_1112 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|323129248|gb|ADX16678.1| Uncharacterized protein ycaI [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
Length = 756
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 301 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 354
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 355 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 403
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 404 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTL 460
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 461 LPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 520
Query: 239 TLIS 242
+I
Sbjct: 521 KVIL 524
>gi|291326410|ref|ZP_06124373.2| DNA internalization-related competence protein ComEC/Rec2
[Providencia rettgeri DSM 1131]
gi|291314427|gb|EFE54880.1| DNA internalization-related competence protein ComEC/Rec2
[Providencia rettgeri DSM 1131]
Length = 789
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 20/192 (10%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
L P +F + AI Y+ +I + Y +K
Sbjct: 336 ILLLDPLAILS-----DSFWLSSFAVLAILYWLTIFPLPYHLS----------KGVKGKI 380
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ ++ + F+ I V GL+ANI +P++S+ V+PA L+ L+ I
Sbjct: 381 IG--LTHLQIGLLVLLIPMQLSLFNGINVMGLVANIWFVPLVSWCVVPAILLLFLVPIKV 438
Query: 141 LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
+ + +D+ + +S +EF I +++V K R+
Sbjct: 439 VQQPILYTIDRVIDMGLEPLPYLSTFWSEFINV---PYYLFLICWLSIIVVLFKWYKRYF 495
Query: 201 GSIMIGITIIIL 212
G I + I L
Sbjct: 496 GLIGCVVISIFL 507
>gi|16764343|ref|NP_459958.1| hypothetical protein STM0983 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16419495|gb|AAL19917.1| putative recombination protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|261246199|emb|CBG24003.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|301157526|emb|CBW17016.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312911969|dbj|BAJ35943.1| hypothetical protein STMDT12_C10000 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|332987874|gb|AEF06857.1| hypothetical protein STMUK_0949 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 754
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 299 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 353 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 402 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTL 458
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 459 LPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 518
Query: 239 TLIS 242
+I
Sbjct: 519 KVIL 522
>gi|254297046|ref|ZP_04964499.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 406e]
gi|157807040|gb|EDO84210.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 406e]
Length = 856
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 67/266 (25%), Gaps = 40/266 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 353 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 407
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 408 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFRRLARRVRDAARAQFAVTIALA 467
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 468 PLTALWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHALVQALM 526
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + A + P+ + + + + +
Sbjct: 527 RLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCAAPLAWLPLV 580
Query: 218 SFSPDLLISEKGNLVALVDKNTLISN 243
+ +P L AL
Sbjct: 581 APAPLAPPDGAFRLTALDVGQGSAVL 606
>gi|317486142|ref|ZP_07944986.1| competence protein [Bilophila wadsworthia 3_1_6]
gi|316922591|gb|EFV43833.1| competence protein [Bilophila wadsworthia 3_1_6]
Length = 947
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/240 (9%), Positives = 67/240 (27%), Gaps = 27/240 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMI----YSSESHNTWTWKKISSIKQSFLNEIRANI- 88
L+D + ++ I + S S +S ++ + IR
Sbjct: 442 LYDLGVQLSFSAVAGIALCSPWLSKLWNDGPLSFSPLKVLQGGLSPMRAAGGRFIRLLWL 501
Query: 89 ----GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD-- 142
+ ++ F ++ I N+L +P L F+V+P + ++ L+
Sbjct: 502 TLGCSVAAQLATLPLVLDAFGRSTLWFPI-NLLWLPALGFIVLPLSFLGLIAAATGLEQA 560
Query: 143 -NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--------- 192
+ + ++H + + + +
Sbjct: 561 AGFLLHLANIPCEALLHSLRWLQAHAGLDLFVSPRPHWTAILGFGAIAVALAMRIHRDHF 620
Query: 193 --CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK---NTLISNYSNP 247
+ G++++ + ++ + L + + G A++ +
Sbjct: 621 PHAAKRLLISGALLLSVGPLLWVHAFFEPKISLRVLDVGQGQAVLLEWPYGGRAMVDGGG 680
>gi|76808579|ref|YP_334101.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 1710b]
gi|76578032|gb|ABA47507.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 1710b]
Length = 842
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 67/266 (25%), Gaps = 40/266 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 339 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 393
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 394 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFRRLARRVRDAARAQFAVTIALA 453
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 454 PLTALWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHALVQALM 512
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + A + P+ + + + + +
Sbjct: 513 RLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCAAPLAWLPLV 566
Query: 218 SFSPDLLISEKGNLVALVDKNTLISN 243
+ +P L AL
Sbjct: 567 APAPLAPPDGAFRLTALDVGQGSAVL 592
>gi|223939483|ref|ZP_03631360.1| ComEC/Rec2-related protein [bacterium Ellin514]
gi|223891868|gb|EEF58352.1| ComEC/Rec2-related protein [bacterium Ellin514]
Length = 810
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/235 (14%), Positives = 66/235 (28%), Gaps = 21/235 (8%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF--------YS 54
++ + D + I + P LF F + + I
Sbjct: 322 ALKRPSDMINSLFVAALIILVWEPRQ-----LFQAGFQLSFFVVLCIILIWPVFDQLTLR 376
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
+ + W++ I +L ++ + + +FH I A
Sbjct: 377 LLRHDPLLPEELVPKWQRWLKIPARYLLDLFFS-SIAAWLGSIPLAAYYFHIITPASGPA 435
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIG 173
N+ A+ + V+I +L F W L I + + + +
Sbjct: 436 NVPAVFLCGLVLIANLCSLLLAAWFPWAAELFNHAGWFLMRGIENSSQWSASWPAAYYYV 495
Query: 174 RIPETSFVTIVVEFLLMVFCKTNI-----RHIGSIMIGITIIILFTFPYSFSPDL 223
P F IV LL+ I R+ + +I+ + P +
Sbjct: 496 PSPSL-FSIIVYYVLLLAIFTGWIFRKEQRNWRITGVAFLVIVWCSVYALQHPSI 549
>gi|256827203|ref|YP_003151162.1| ComEC/Rec2-related protein [Cryptobacterium curtum DSM 15641]
gi|256583346|gb|ACU94480.1| ComEC/Rec2-related protein [Cryptobacterium curtum DSM 15641]
Length = 843
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 72/244 (29%), Gaps = 29/244 (11%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ + L PP+ + +F I F + + I
Sbjct: 361 CVGVLVILWPPNALSA------SFQLSAAATLGIILF-------------GRYFAQWIGV 401
Query: 76 IKQSFLNEIRANIGT--YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ I +G S + F I F P+ +AN+LA P+ + A ++
Sbjct: 402 LLFGHAQPIADVLGITIAASLATLPFSISVFGQFPLVSPLANVLATPLFALTCTIASILV 461
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE--FLLMV 191
+ ++ + G+ + + +AH + + + +L V
Sbjct: 462 PIAALIPPLSSVLGIPCFCAQALCDVAHLCAHIPCASIPVAFELPVLLCATLTVFGVLYV 521
Query: 192 FCKT---NIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLISNYS 245
T + + ++ + P + L+ E + V + D + + +
Sbjct: 522 LWPTPSLPAAISAACLATGALVCILIVPPALHASELVLLDLEGDSAVLVRDGPSAVLIGT 581
Query: 246 NPPS 249
Sbjct: 582 GSSG 585
>gi|261210523|ref|ZP_05924816.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. RC341]
gi|260840308|gb|EEX66879.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. RC341]
Length = 747
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 81/241 (33%), Gaps = 31/241 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + + + W + + +
Sbjct: 331 SFWMSFLAVAIVLYQLANQEKRQAWWKALLWAQLTLVCL-------------------MA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
F + + ++ N+L IP S V++PA + + L + + + + W
Sbjct: 372 PVTAYFFGGLSMTSVVYNLLFIPWFSVVIVPALFVGLFLSVTMSYWATLYWPWVDWTF-Y 430
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ A + + + +V+ L + + + ++ + +L+ +
Sbjct: 431 PLAWALQFADVGWVVIPKTVQGFVAALVVISLLY------RVMSLRACILAWCLAVLWWW 484
Query: 216 PYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
S +P ++ L +++++ Y S+ + +LI P + +++
Sbjct: 485 FPSVTPRWRMDILDVGHGLAIVIEQDKRAIIYDTGSSWSGGSYVESLIEPILQQRGIRRL 544
Query: 273 D 273
D
Sbjct: 545 D 545
>gi|156934597|ref|YP_001438513.1| hypothetical protein ESA_02431 [Cronobacter sakazakii ATCC BAA-894]
gi|156532851|gb|ABU77677.1| hypothetical protein ESA_02431 [Cronobacter sakazakii ATCC BAA-894]
Length = 741
Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/255 (10%), Positives = 81/255 (31%), Gaps = 37/255 (14%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ P+ P L ++A+ ++Y + +
Sbjct: 289 RQWTPWQVWMCCVAAILFFDPVSILSESL-----WLSAFAVAALIFWYQWVPLRAEGK-- 341
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ + S+ + + + FH + + L+AN++A+P ++FV
Sbjct: 342 ----WRPLKSLLH---------LQCGMTLLLLPLQLLLFHGLSLTSLLANLIAVPGITFV 388
Query: 126 VIPAGLIAILLMILSLDN---IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
V+P L++++L + L + L ++ + +
Sbjct: 389 VVPLVLLSMVLDLAHLAWLEHYAGLLADRSLALLFWLLR---ELPPGWLSLDQRYQWITL 445
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITI---IILFTFPYSFSPDLL----ISEKGNLVALV 235
++ + I ++ ++F + D+ + L ++
Sbjct: 446 AP----WLIIIALRVGWHRISPATCGISLGLLTWSFWQKTADDVWRLHMLDIGHGLAIVI 501
Query: 236 DKNTLISNYSNPPSF 250
+++ Y + ++
Sbjct: 502 ERHGRAILYDSGNAW 516
>gi|295092102|emb|CBK78209.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium cf. saccharolyticum K10]
Length = 859
Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 53/179 (29%), Gaps = 35/179 (19%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + + AIG+ + S + +
Sbjct: 372 AFQLSFGAVFAIGWA----------------GKELTDSFRCRRGWTRALAVSAAIQLVTG 415
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGLIAILLMILS-----------LDN 143
++ HF PVYG++ N + IP++++VV + + ++ + S
Sbjct: 416 PLVLWHFFEYPVYGILLNFIVIPLMTYVVGAGLAGLFLGLMAELFSACSFSAVFEGLFGL 475
Query: 144 IPFGVMAWG---LDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ G M L + + +GR + L ++ +T R
Sbjct: 476 LAAGSMGTCHYILAFYEWLCRAVGKLPIYSLILGRPALWKLAAYYL-MLSVLLWRTAER 533
>gi|320528979|ref|ZP_08030071.1| DNA internalization-related competence protein ComEC/Rec2
[Selenomonas artemidis F0399]
gi|320138609|gb|EFW30499.1| DNA internalization-related competence protein ComEC/Rec2
[Selenomonas artemidis F0399]
Length = 810
Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 56/168 (33%), Gaps = 22/168 (13%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
F +F + + + + IP +++ I + +I
Sbjct: 361 FHISFQLSFLATAGLLFIAPIPF-------------QRMKGISVFAAGSL--SITMSAQL 405
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ L +F+ + + L++N + +PI+ ++I L I I+ L
Sbjct: 406 ATLPMLAWYFNQVSLSSLLSNFIVVPIVDVIIIVGLLGGITAWIIPLAGKVVFAFD---S 462
Query: 155 IIIHIA----HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
I++ I+ ++ PE LL++F +R
Sbjct: 463 ILLSISFELTRFMAALPASKIFVPTPEIGVGCAYYTLLLLIFAPQELR 510
>gi|295706660|ref|YP_003599735.1| ComE operon protein [Bacillus megaterium DSM 319]
gi|37650596|emb|CAD69020.1| ComEC protein [Bacillus megaterium]
gi|294804319|gb|ADF41385.1| ComE operon protein [Bacillus megaterium DSM 319]
Length = 763
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/272 (10%), Positives = 83/272 (30%), Gaps = 43/272 (15%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +K + + L P G F +F+ + I +
Sbjct: 296 IKIQRKILLVDSISFAFIAMLLFKPYYLFDVG-FQLSFAVSFALILSSQTILP------- 347
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + S+ L+ +F+ + + L N++ +P+
Sbjct: 348 ---------------RFHSSFSQLMVVSAIAQVSSLPLLLYYFYGVSLLSLPLNMVFVPL 392
Query: 122 LSFVVIPAGLIAI---LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
S V++P L+ + +L+ + + ++ L + +F G+
Sbjct: 393 FSLVILPLCLLILFVRILLP-GVSELLEQILHVLLLFCEKLLGFFEWIPADFVTGKPH-- 449
Query: 179 SFVTIVVE------FLLMVFCKTN--IRHIGSIMIGITIIILFTFPYSFSPDLLIS---E 227
+ + + L + + +R++ ++ + ++ + ++
Sbjct: 450 --IVLFLGMYLCIYALFVALEEGEFFVRYMFLLVALLAAQCMYPYLNPKGTVTMVDVGQG 507
Query: 228 KGNLVALVDKNTLISNYSNPP-SFIFSQWKSA 258
++ L + + + SF W+
Sbjct: 508 DCFIIELPYRKGVYMIDTGGTVSFPKEPWQKR 539
>gi|88860175|ref|ZP_01134814.1| putative DNA internalization-related competence protein ComEC/Rec2
with Metallo-beta-lactamase superfamily domain
[Pseudoalteromonas tunicata D2]
gi|88818169|gb|EAR27985.1| putative DNA internalization-related competence protein ComEC/Rec2
with Metallo-beta-lactamase superfamily domain
[Pseudoalteromonas tunicata D2]
Length = 759
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 61/196 (31%), Gaps = 26/196 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
K+Y A T + L P PGL+ F+F I+ + +++ +
Sbjct: 318 KKRYISLSALTLALVVILLLNPFELLNPGLY-FSF------IAVVIILLVYRRIVGNLS- 369
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
I + + I +F + + ++ NI+ +PI S
Sbjct: 370 --------IVFVTVRRTLVLLIAIQLALFFGLLPLSWFYFSGVSLASMLINIIVLPIFSI 421
Query: 125 VVIPAGLIAILLMILSLDNIPF-------GVMAWGLDIII---HIAHRISVAHNEFCIGR 174
++ ++ ++ + + VM + L + + + I
Sbjct: 422 LLPLLLVLILVAFLFGMSAPLMLFDQVLSTVMEYFLALSLDVYWLELGFVSWQQVILIYL 481
Query: 175 IPETSFVTIVVEFLLM 190
+ TI+ + +
Sbjct: 482 VGSFLLFTILHRLVWL 497
>gi|321223306|gb|EFX48375.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
Length = 697
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 242 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 295
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 296 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 344
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 345 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTL 401
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 402 LPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 461
Query: 239 TLIS 242
+I
Sbjct: 462 KVIL 465
>gi|237813001|ref|YP_002897452.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei MSHR346]
gi|237503887|gb|ACQ96205.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei MSHR346]
Length = 856
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 68/266 (25%), Gaps = 40/266 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 353 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 407
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 408 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFRRLARRVRDAARAQFAVTIALA 467
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 468 PLTVLWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHTLVQALM 526
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + A + P+ + + + + +
Sbjct: 527 RLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCAAPLAWLPLV 580
Query: 218 SFSPDLLISEKGNLVALVDKNTLISN 243
+ +P L AL
Sbjct: 581 APAPLAPPDGAFRLTALDVGQGSAVL 606
>gi|238789315|ref|ZP_04633102.1| hypothetical protein yfred0001_41240 [Yersinia frederiksenii ATCC
33641]
gi|238722647|gb|EEQ14300.1| hypothetical protein yfred0001_41240 [Yersinia frederiksenii ATCC
33641]
Length = 726
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 75/250 (30%), Gaps = 29/250 (11%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF-YSIPKMIYSSESHNT 67
+ + L+ P +F + ++ + Y +P S
Sbjct: 274 SAWQVWLWALVLILLNDPLAVLS-----DSFWLSCLAVFSLICWCYWMPLSSRFKTSWYG 328
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ L + IG F I + + AN+ A+PI+SF+ +
Sbjct: 329 LPIRWFHLQLGMMLLLMPLQIGL-------------FQGISLLSIPANLWAVPIVSFMTV 375
Query: 128 PAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P L+A++ + + + + + L + ++ TS
Sbjct: 376 PCVLLALVFTLFPTIAAVFWLLADMSLTAVFLPFDYLN-----VGWLYTGTTSIALGYGG 430
Query: 187 FLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+L+M+ + R+ ++ + ++ + L +++++
Sbjct: 431 WLVMLIWRFQWWRNYPIGIMILCANLILLTQRRDEYRWRVDMLDVGHGLAMVIERDRKAI 490
Query: 243 NYSNPPSFIF 252
+ +
Sbjct: 491 IFDTGNRWAT 500
>gi|326316184|ref|YP_004233856.1| DNA internalization-like competence protein ComEC/Rec2 [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323373020|gb|ADX45289.1| DNA internalization-related competence protein ComEC/Rec2
[Acidovorax avenae subsp. avenae ATCC 19860]
Length = 952
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/205 (10%), Positives = 58/205 (28%), Gaps = 16/205 (7%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L F + + + + + ++ +
Sbjct: 485 ALLQAGFWLSFVAVGVLFA--------SDAATPPEVMPASRAAGRLRARLLALLREQWVV 536
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + + + F I + G +AN+ AIP ++ VV P L+ +L L + A
Sbjct: 537 TLALTPLTVLLFGQISLVGFVANLAAIPWMTLVVTPLALLGVLWAPL------WSAAAAC 590
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
L ++ + +++ + + + ++
Sbjct: 591 LRPFAEGLQWLAAWPWATLSLPAAPLWAGVAGMAGGVLLVMRLPWALRLMGLPLLLPVLW 650
Query: 213 FTFPYSF--SPDLLISEKGNLVALV 235
+ +LL + G A++
Sbjct: 651 WHPARPAAGQFELLAPDVGQGSAVL 675
>gi|83645476|ref|YP_433911.1| DNA internalization-related competence protein ComEC/Rec2 [Hahella
chejuensis KCTC 2396]
gi|83633519|gb|ABC29486.1| DNA internalization-related competence protein ComEC/Rec2 [Hahella
chejuensis KCTC 2396]
Length = 774
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 80/286 (27%), Gaps = 29/286 (10%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + L P P + F + + + +S + S+ W
Sbjct: 329 PSTFFIAVLSCSLLLDPLAP-----WSAGFWLSFVAVGLLFAAFSHRPLQSFSKWGALWR 383
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + + FL F IP +AN++A P+++ +V+P
Sbjct: 384 SQ------------------MVLTIGLAGFLAISFQQIPSSAPLANLIATPLITLIVVPL 425
Query: 130 G---LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
G L+ L+ + + LD +A S+ S I V
Sbjct: 426 GLLALVVGLVWPSG-GEVLLRMTDVCLDGFWRVAEMASLGPILQAPLEATLASVGFIFVG 484
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA-LVDKNTLISNYS 245
+ ++ + + + + + G +A +++ Y
Sbjct: 485 ICTAAAMRAPGAVWFVGLLALLGMGMREQDEPVWFRYTLLDVGQGLASVIESRGETVLYD 544
Query: 246 NPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQP 291
P F+ W + V E L+ S
Sbjct: 545 AGPGFV-DGWSAGEAVVGPYLRSVGVEGLKYAVISHGDSDHAGGWD 589
>gi|189499932|ref|YP_001959402.1| ComEC/Rec2-related protein [Chlorobium phaeobacteroides BS1]
gi|189495373|gb|ACE03921.1| ComEC/Rec2-related protein [Chlorobium phaeobacteroides BS1]
Length = 722
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/328 (12%), Positives = 93/328 (28%), Gaps = 33/328 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
++++ P + + I P LF+ F ++AI Y P + SE
Sbjct: 333 LSRQSFPLNSLAVADLILLCIDPLE-----LFNAGFLMTNAAVAAIILLY--PVLSSPSE 385
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI---P 120
+ + + ++F + A IG + F V G+IAN+ +
Sbjct: 386 TWKGLAGEVFRPVWKAFSVSLAAIIGVSPVIA------WFFGTFSVVGIIANLPVVFLAS 439
Query: 121 ILSFVVIPAGLIAILLMILSL----DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ + ++PA L+ +L L+L F M G + +
Sbjct: 440 CMLYAMLPAFLLNSVLPDLALYPASSAWFFARMTLG------VTEYFGDLSWAVVRAQPD 493
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY-------SFSPDLLISEKG 229
++F G ++ + F + S + +++
Sbjct: 494 SVWIAVYYAAVAAVLFFLYRKNPAGVMIAFLCAANYFVWAPVLQAERSSPAFVRIVAGND 553
Query: 230 NLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSM 289
+ + I + + + + + + + M
Sbjct: 554 TALLCSIGGSSILIDAGSKPWHRETINRQMRRNGIKKIDAAIQFASPDSLVGAIDAQNHM 613
Query: 290 QPRKFLCIKKSFCVGCHRSDVIVGVLKR 317
+ + SF V DV+
Sbjct: 614 LSEEHHLAQSSFLVARSGDDVLKFWGGD 641
>gi|124267738|ref|YP_001021742.1| putative transporter DNA uptake transmembrane protein [Methylibium
petroleiphilum PM1]
gi|124260513|gb|ABM95507.1| putative transporter DNA uptake transmembrane protein [Methylibium
petroleiphilum PM1]
Length = 846
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 53/169 (31%), Gaps = 16/169 (9%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS----SESHNTWTW 70
T + P PG + + + + ++ + + + W
Sbjct: 358 TAAMVVVTAIDPWALLQPG-----YWLSFAAVGLLLASGEARGLVAATSGLATAPTRLRW 412
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ ++ L+ + + + F + + G AN++AIPI++ V P
Sbjct: 413 QGVAEWLVRLLSG-GLRTQAIATLGLAPLTLVFFQQLSLVGFAANLVAIPIITLGVTPLA 471
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
L+ +LL L +G AW + + ++
Sbjct: 472 LLGVLLPPL------WGPAAWTVAQLNAGLQWLATPDWAVWSVPAATPW 514
>gi|257061871|ref|YP_003139759.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 8802]
gi|256592037|gb|ACV02924.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 8802]
Length = 748
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 61/182 (33%), Gaps = 24/182 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F S + I I K++ + + I + +
Sbjct: 361 GFQFSFLSTFGLIVTI-----------------PPLMKRLDWLPPAIATLI--AVPLAAT 401
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
+ F + Y + NI+ P+++ + I + + + I L + ++ +
Sbjct: 402 IWVLPLSLYKFSILATYSIPTNIITSPLITAISIGGMISSAIAFISPILGSFVVKILYYP 461
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVF---CKTNIRHIGSIMIGIT 208
+ +I I + +G++ + I V +L+ + + +G+
Sbjct: 462 VYFLIKSLEIIVHLPGSYYAVGKLSLGVMLLIYVILVLIWLNPFWQRYWKLAALFSLGLI 521
Query: 209 II 210
I+
Sbjct: 522 IL 523
>gi|291567021|dbj|BAI89293.1| competence protein [Arthrospira platensis NIES-39]
Length = 817
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/159 (11%), Positives = 57/159 (35%), Gaps = 17/159 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + ++ +G ++P ++ + + + + I + +
Sbjct: 386 DLGFQFSF--LATLGLLVTVPPLM-----------RSLQWLPPVIASCI--AVPIAAAIW 430
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-IPFGVMAWGLD 154
I F+ + + + NILA+P ++ + + L A++ +I + + + L
Sbjct: 431 ILPLQIYVFNLVSPFSIFVNILAVPFITVITLGGMLTAVVALIWPWAASVLVSALYYPLQ 490
Query: 155 IIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVF 192
+I+I + +G + + + + +
Sbjct: 491 GLIYIVEFFNNLPGNSIAVGTLSLAQLIGLYSINIWLCL 529
>gi|294784642|ref|ZP_06749931.1| COME operon protein 3 [Fusobacterium sp. 3_1_27]
gi|294487858|gb|EFG35217.1| COME operon protein 3 [Fusobacterium sp. 3_1_27]
Length = 396
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 19/160 (11%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
Y+ T+ A +S P +F +F Y + AI Y +
Sbjct: 220 YEKIDLGKTLFISAIISILINPI--SIFSVSFQLSYGAMVAIIYIFPY------------ 265
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+KI+ K L+ I + +F+ I +I+N++ +P+ SF +
Sbjct: 266 --VRKINYKKFKILDYILFTTTI--QIFLIPITVYYFNSIQFLSVISNLILLPLASFYIT 321
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
+A+ L L + V+ I+I+ S
Sbjct: 322 -INYVALFLENFYLSFLLKPVIEILYKILIYFIDFFSELP 360
>gi|256846274|ref|ZP_05551731.1| COME operon protein 3 [Fusobacterium sp. 3_1_36A2]
gi|256718043|gb|EEU31599.1| COME operon protein 3 [Fusobacterium sp. 3_1_36A2]
Length = 396
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 19/160 (11%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
Y+ T+ A +S P +F +F Y + AI Y +
Sbjct: 220 YEKIDLGKTLFISAIISILINPI--SIFSVSFQLSYGAMVAIIYIFPY------------ 265
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+KI+ K L+ I + +F+ I +I+N++ +P+ SF +
Sbjct: 266 --VRKINYKKFKILDYILFTTTI--QIFLIPITVYYFNSIQFLSVISNLILLPLASFYIT 321
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
+A+ L L + V+ I+I+ S
Sbjct: 322 -INYVALFLENFYLSFLLKPVIEILYKILIYFIDFFSELP 360
>gi|34765028|ref|ZP_00145332.1| COME operon protein 3 [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27885634|gb|EAA23070.1| COME operon protein 3 [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 219
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 19/160 (11%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
Y+ T+ A +S P +F +F Y + AI Y +
Sbjct: 65 YEKIDLGKTLFISAIISILINPI--SIFSVSFQLSYGAMVAIIYIFPY------------ 110
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+KI+ K L+ I + +F+ I +I+N++ +P+ SF +
Sbjct: 111 --VRKINYKKFKILDYILFTTTI--QIFLIPITVYYFNSIQFLSVISNLILLPLASFYIT 166
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
+A+ L L + V+ I+I+ S
Sbjct: 167 -INYVALFLENFYLSFLLKPVIEILYKILIYFIDFFSELP 205
>gi|205358141|ref|ZP_03223943.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205327283|gb|EDZ14047.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
Length = 737
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 335
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 336 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 385 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTL 441
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 442 LPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 501
Query: 239 TLIS 242
+I
Sbjct: 502 KVIL 505
>gi|19703568|ref|NP_603130.1| COME operon protein 3 [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713668|gb|AAL94429.1| COME operon protein 3 [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 378
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 17/136 (12%)
Query: 32 PGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
+F +F Y + AI Y + +KI+ K L+ I
Sbjct: 228 TAIFSISFQLSYGAMIAIAYIFPY--------------VRKINYKKFKILDYILFTTTI- 272
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
+ +F+ + +I+N++ +P+ SF + IA+ L L + ++
Sbjct: 273 -QIFLIPITVYYFNSVQFLSVISNLILLPLASFYIT-VNYIALFLENFYLSFLLKPIIEI 330
Query: 152 GLDIIIHIAHRISVAH 167
I+I++ +
Sbjct: 331 LYKILIYLIDFFAELP 346
>gi|262368624|ref|ZP_06061953.1| LOW QUALITY PROTEIN: competence factor involved in DNA uptake
[Acinetobacter johnsonii SH046]
gi|262316302|gb|EEY97340.1| LOW QUALITY PROTEIN: competence factor involved in DNA uptake
[Acinetobacter johnsonii SH046]
Length = 787
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 81/209 (38%), Gaps = 20/209 (9%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F Y + Y + +W K + S+K ++ + + +
Sbjct: 368 AFWLSYGACFVLLRIYQTTIRL-DLTRPQSWQKKFVFSLKLLVESQWKIFV------ALM 420
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMIL-SLDNIPFGVMAWGLDI 155
+I F + I+N++AIP++S +V+P ++A L + L ++ F + W L
Sbjct: 421 PLVIIFFKQVSWVSPISNLVAIPLISLLVVPLEVLAALTFYLFEPLSSLLFQLADWVLVF 480
Query: 156 IIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVF----CKTNIRHIGSIMIGITII 210
++ I + + ++ + + + +++ +++ + +G I +
Sbjct: 481 LLGILNVLDALLPIKLYPIALNTWQVILLILLLIIVFMPKPSLPKSWLVLGLIPL----- 535
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNT 239
L + +L++ + G A+ ++
Sbjct: 536 -LGFSSQNRPFELIVLDVGQGQAVYMQHG 563
>gi|207856374|ref|YP_002243025.1| hypothetical protein SEN0887 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|206708177|emb|CAR32470.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
Length = 754
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 81/247 (32%), Gaps = 33/247 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 299 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 353 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ + I
Sbjct: 402 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGW--VNIDNRWQWL 456
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS-------PDLLISEKGNLVALV 235
++ +L ++ + N+ + + ++L ++P +L +G +A+V
Sbjct: 457 TLLPWLTLIAWRLNV-WRTCPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIV 515
Query: 236 DKNTLIS 242
+ +I
Sbjct: 516 RGDKVIL 522
>gi|254302625|ref|ZP_04969983.1| competence protein [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148322817|gb|EDK88067.1| competence protein [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 392
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 53/150 (35%), Gaps = 22/150 (14%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
I+ L P+ +F +F Y + AI Y + +KI+ K
Sbjct: 233 AAISILINPTA-----IFSVSFQLSYGAMLAIIYIFPY--------------VRKINYKK 273
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
L+ I + +F+ I +I+N++ +P+ S + IA+ L
Sbjct: 274 FKILDYILFTTTI--QIFLIPITVYYFNSIQFLSVISNLILLPLASLYIT-VNYIALFLE 330
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
L + ++ ++I++ +
Sbjct: 331 NFYLSFLLKAIIEILYKMLIYLIDFFAELP 360
>gi|312621882|ref|YP_004023495.1| DNA internalization-related competence protein comec/rec2
[Caldicellulosiruptor kronotskyensis 2002]
gi|312202349|gb|ADQ45676.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor kronotskyensis 2002]
Length = 752
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 20/155 (12%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+P + + P LFD F + + +I FY
Sbjct: 308 NPDTLNSLAVSSVLML----LVNPLFLFDIGFQLSFLSVLSIILFYKG------------ 351
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
++ + +K + + +F I V + NI+A+P+ VV
Sbjct: 352 -IYEYFAKLKIPRGISSLIAVSISAQILILPLMAYYFSEISVISFLTNIVAVPVAGAVVP 410
Query: 128 PAGLIAILLMILSLDNIPFG-VMAWGLDIIIHIAH 161
AGL+ L ++ + + + ++ + +++++
Sbjct: 411 -AGLLYCLFLVFNANILLLKVLLEVSVKALMYLSK 444
>gi|21325118|dbj|BAB99740.1| Predicted multitransmembrane, metal-binding protein
[Corynebacterium glutamicum ATCC 13032]
Length = 513
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 76/247 (30%), Gaps = 23/247 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + +P ++ I L S A + F + I ++Y +
Sbjct: 236 SSRMEPMH-GLSLSVICLLFYDSNLAVH----YGFLLSCAATAGIVMLQP---LLYRAIG 287
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
WK + ++F I A++ T + I + ++AN+L +
Sbjct: 288 PPLAVWKVPDIVVRAFAVSIAADLVTIPIIALMA------RQISLVAVLANVLVELAVPP 341
Query: 125 VVIPAGLIAIL-LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+ + + + L+ ++ ++ I H+A N
Sbjct: 342 ITLLGLIAVLASLLPWPVEYPLLKIIEPFTWWIHHVAKWCQQLPNSTLEISAGWAGIAWA 401
Query: 184 VVEFLLMV--FCKTNIRHIGSIMIGITIIILFTFPYSFSPD------LLISEKGNLVALV 235
+ + +V K +R + + + + D ++I++ L +
Sbjct: 402 CMAAVWVVVIIYKGYVRTLAVCCVCFFLFGAWNNRLPAQIDPTELRFVIIADDSELTDVP 461
Query: 236 DKNTLIS 242
+ LI
Sbjct: 462 EHAELII 468
>gi|116330395|ref|YP_800113.1| competence protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116124084|gb|ABJ75355.1| Competence protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 697
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 65/189 (34%), Gaps = 19/189 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+K I + P PG + +F + ++ I + +S P + +
Sbjct: 225 RKLRSVDLLLGSAWILWIVDP-----PGFYTVSFCLSFGAVAGI-FLFSYPIQVACN--F 276
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + S +K++ +I L+ F ++ N++ +P+ +
Sbjct: 277 LSDENRITSFLKENL------SISFSAGLGTMPVLLFAFGSFSFGSILLNLIVVPLTGIL 330
Query: 126 --VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++ LI + + + + + ++I+++ +S + F R I
Sbjct: 331 LPILYFSLIIQKIKLTFFAEPFWSITELLIQMLIYLSETLSQSLG-FYKERGDAIWIGII 389
Query: 184 VVEFLLMVF 192
+ L+
Sbjct: 390 --GWFLLCV 396
>gi|226324467|ref|ZP_03799985.1| hypothetical protein COPCOM_02248 [Coprococcus comes ATCC 27758]
gi|225206915|gb|EEG89269.1| hypothetical protein COPCOM_02248 [Coprococcus comes ATCC 27758]
Length = 744
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 58/167 (34%), Gaps = 13/167 (7%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI------KQSFLNEIRANIGTYGSA 94
GI+ IG + P ++++ ++ + K F + +R ++ +
Sbjct: 278 LTALGIAEIGLLLANPLRLFTAGFQLSFAAVLGIYLIGSGNKKGRFSDSVRMSVRLWSFL 337
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL-IAILLMILSLDNIPFGVMAWGL 153
+ H++ +Y N+L IP+ S +++ +A++L+ +I +
Sbjct: 338 --LPVTLWHYYETCLYAPAWNLLVIPMASVLLLCGSAGMAVMLIPCGAGDIMQSALWKIT 395
Query: 154 DIII----HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
+ I+ + + I P + LL +
Sbjct: 396 EWILLFYEKGSGLLLELPGARWIPGRPRLWQIACYYGVLLFYLWRKR 442
>gi|254519891|ref|ZP_05131947.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226913640|gb|EEH98841.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length = 562
Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 60/163 (36%), Gaps = 27/163 (16%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y+P + + + L P F+ F + I F ++
Sbjct: 259 LKRNYNPLASLSMAGVVLILYKPYSV-----FEVGFQLSFLATLGIILF---------NK 304
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S N +K +++ + + + LI +F + L+ N+L +P+++
Sbjct: 305 SINKKLYKFPKFLREGISICLSSQV------FTFPILIIYFKEFSLGFLMGNLLLLPLIN 358
Query: 124 FVVIPAGLIAILL-------MILSLDNIPFGVMAWGLDIIIHI 159
VV+ L+A+L+ I + + + +++I
Sbjct: 359 IVVVLGNLLAVLVKFNALFNYIAFITYYVTLFIDISTEWLLNI 401
>gi|147677192|ref|YP_001211407.1| hydrolase [Pelotomaculum thermopropionicum SI]
gi|146273289|dbj|BAF59038.1| predicted hydrolase [Pelotomaculum thermopropionicum SI]
Length = 809
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/181 (9%), Positives = 49/181 (27%), Gaps = 11/181 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF F + I + + + + I+ +
Sbjct: 339 LFHPGFQLSFAATWGILHLGPVLSGLLEGLFKRPPGVLCKTLIQG-------LAVSLAAQ 391
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI-PFGVMAWG 152
+ + +++ + + + AN++A+P++ V A L ++
Sbjct: 392 LATVPPVAWYYNLVSLVSVPANLIAVPLVGLVQFLGIAAAALGLLWLPLAGLVNACTGVV 451
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
L++ + + P LL + +R G ++
Sbjct: 452 LELFLALISFFQRLPGAVVYLPTPPVLLAAAWYGGLLALI---RVRKAGLSAGAARLVKG 508
Query: 213 F 213
+
Sbjct: 509 W 509
>gi|170726171|ref|YP_001760197.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
woodyi ATCC 51908]
gi|169811518|gb|ACA86102.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella woodyi ATCC 51908]
Length = 765
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 54/190 (28%), Gaps = 17/190 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ + + + P G F + +S I + + E
Sbjct: 297 RYSSSWERLLFALFLILVIDPFSCLSAG-----FWLSFSALSIILLTLQARPIPVADEPS 351
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + I S + F + +YG++ N + +P S +
Sbjct: 352 SL-------HKRVWLKLSLFWAIQWRLSLGLGLLQAVLFGGLTLYGILFNFIFVPWFSLL 404
Query: 126 VIPAGLIAILLMILSLDN-----IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
VIPA + ++ L L + F ++ L + V +
Sbjct: 405 VIPAAIFTFVIWGLGLTAGFNLSVLFELVDKTLWPVTQALDLFVVLPGAWLPISDHMMLA 464
Query: 181 VTIVVEFLLM 190
+ ++ +
Sbjct: 465 LFFLLCGSWL 474
>gi|139439597|ref|ZP_01773010.1| Hypothetical protein COLAER_02037 [Collinsella aerofaciens ATCC
25986]
gi|133774938|gb|EBA38758.1| Hypothetical protein COLAER_02037 [Collinsella aerofaciens ATCC
25986]
Length = 459
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/244 (9%), Positives = 68/244 (27%), Gaps = 24/244 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+++ T+ L P LF+ F + AI F
Sbjct: 13 RRRHGASALFVTMSIFVLLRP------TVLFEMGFQLSCASVFAILCF------------ 54
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + ++ + I F + +AN + P++S
Sbjct: 55 -CPYATYALGELSVPSGIASMLSVTLCSQLATLPITIPAFGTFSLIAPLANAVIGPVVSV 113
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTI 183
++ + ++ ++ L V + + + ++
Sbjct: 114 LLAVSIVLVPFSLVAPLRTWALVVPMIAARCALFFERLFAAVPGASVSVPPDSMWIYLVP 173
Query: 184 VVEFLLMVFC-KTNIRHIGSIMIGITIIIL---FTFPYSFSPDLLISEKGNLVALVDKNT 239
+ +L+V + R + + + ++ + P + + + G A++ +
Sbjct: 174 CLLAVLLVRWPRPRARPMAVGLACLVLLAAIPYVYWDRFAPPSVTVLDVGQADAILIRQG 233
Query: 240 LISN 243
Sbjct: 234 GAVA 237
>gi|152979387|ref|YP_001345016.1| DNA internalization-related competence protein ComEC/Rec2
[Actinobacillus succinogenes 130Z]
gi|150841110|gb|ABR75081.1| DNA internalization-related competence protein ComEC/Rec2
[Actinobacillus succinogenes 130Z]
Length = 772
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 60/192 (31%), Gaps = 18/192 (9%)
Query: 17 IEGIARLSPPSGPAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
I G+A L + P + F + + +Y I + W+
Sbjct: 296 IYGVALLL----LSNPLMVLSVGFWLSAGAVFCLILWYRIFPL-------RAVRWRNRPI 344
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ ++ + + F+ GL AN++A+P SF+++P L A+L
Sbjct: 345 PVKVRWIFALLHLQFGLLWLFTPVQVALFNGFSWAGLAANLIAVPFFSFLLVPLVLFAVL 404
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ IA I + +T ++ L++F +
Sbjct: 405 TDGAGATW------QIADQLAQWIARLIMRFDGYWLTVSEKTGWILTALLTLCLLMFIRR 458
Query: 196 NIRHIGSIMIGI 207
R + +
Sbjct: 459 LYRELAQPAPSL 470
>gi|154482558|ref|ZP_02025006.1| hypothetical protein EUBVEN_00225 [Eubacterium ventriosum ATCC
27560]
gi|149736583|gb|EDM52469.1| hypothetical protein EUBVEN_00225 [Eubacterium ventriosum ATCC
27560]
Length = 747
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 70/191 (36%), Gaps = 24/191 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ +KYD A + + G+ L F +F I AI I + I +++
Sbjct: 265 LGRKYDAITAIS-LAGLVLLVQNPFVVCNSGFQMSF----GAIIAIVLILPIVEEILNTD 319
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + S + L +++ +P + + NI+ +P++S
Sbjct: 320 NK----------------IIKVLSANFTISLVMNPILAWNYYELPTFSFLLNIVVVPLMS 363
Query: 124 FVVIPAGLIAIL-LMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIGRIPETSFV 181
V++ + + ++ + G+ ++ + + I+ + + P+ + +
Sbjct: 364 VVIVSSIVGIFCSCIMFGFGKVVIFP-GCGILELYTFLCNIINKSSVASIVVGQPKVTII 422
Query: 182 TIVVEFLLMVF 192
+ LL+V
Sbjct: 423 IVYYAILLVVL 433
>gi|93005621|ref|YP_580058.1| ComEC/Rec2-related protein [Psychrobacter cryohalolentis K5]
gi|92393299|gb|ABE74574.1| ComEC/Rec2-related protein [Psychrobacter cryohalolentis K5]
Length = 1006
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/230 (10%), Positives = 82/230 (35%), Gaps = 11/230 (4%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + +A L P L+ + + ++ + + + + + + +
Sbjct: 477 PVSTMRVLFALAVLMAWHDPYV--LWQAGYWLSFIAVALLLKYEDTSQNQPLTSNQPSTS 534
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ K+ + + + + + F ++GLI N+ AI + ++++P
Sbjct: 535 YDKLLRC-LWLSFKRLFKLQCWLFLALLPVTLLLFGKASLWGLIVNLFAIGLFGWIIVPL 593
Query: 130 GLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH---NEFCIGRIPETSFVTIV 184
L+A L ++ S+ +I + ++ + + + ++ + + + + +
Sbjct: 594 NLLAGLCYLILPSVADIIWMLVTAIVSNLHELIGWLTAMPVLSDAWLYTPVNAAILLMAL 653
Query: 185 VEFLLMVFCKT---NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
+ L + + + + + + + + +P L I G+
Sbjct: 654 LTILPWLLPRGLISRWLVLPPLSLLVMTVYANQQSLTTTPTLYILPTGDH 703
>gi|308177475|ref|YP_003916881.1| competence protein [Arthrobacter arilaitensis Re117]
gi|307744938|emb|CBT75910.1| putative competence protein [Arthrobacter arilaitensis Re117]
Length = 755
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/188 (13%), Positives = 53/188 (28%), Gaps = 23/188 (12%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDN 143
I + +I +Y L N+L P+L + + +L L
Sbjct: 355 LTAICCAAQFTCLPVIIALNSNFSLYSLPTNLLVAPLLPLITSVGMVCLLLCTPLPGFSG 414
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC--------KT 195
+ V + I +AH S + V+ +++ K
Sbjct: 415 VLIWVPGLLAEAIGKVAHFASGLPGAARPWPEGLGGIILAVMLAVVLCTLLIVGRETEKL 474
Query: 196 NIRHIGSIMIGITIIILFTFPYS--------FSPDLLIS------EKGNLVALVDKNTLI 241
+R + ++G ++ + P I+ ++ L D +
Sbjct: 475 RVRQVALGVLGAILVCVLALVLPATLFYREKVPPQWSIAMCDVGQGDAFVINLGDARGWL 534
Query: 242 SNYSNPPS 249
+ P S
Sbjct: 535 IDTGPPES 542
>gi|269102440|ref|ZP_06155137.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268162338|gb|EEZ40834.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 787
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 12/216 (5%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+L + + + + + P G F + + F S
Sbjct: 317 LLYARRTWLSWQIFLVTLTLCLVWNPLSSYASG-----FWLSFSAVW--ILFASRVFSGK 369
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
S S T K S +S E+ + F + ++ I N +A+P
Sbjct: 370 SLSSPKTARHSKFSHKAKSNAVELV-KLQFVLLIFMLPLQWHWFGGMSIWAPIINFIAVP 428
Query: 121 ILSFVVIPAGLIAILL-MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+S V +P +AIL L + + + W L +++IA +
Sbjct: 429 WVSMVTVPLLFLAILTSWWLPASLLIWQLADWSLLPVLYIASW--AKGGWWLFSENTYWI 486
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+V + + + IG + ++ LF +
Sbjct: 487 LCGAIVWGISLYLLPLR-QFIGGHISIFVLLCLFYW 521
>gi|254191415|ref|ZP_04897919.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei Pasteur 52237]
gi|157939087|gb|EDO94757.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei Pasteur 52237]
Length = 856
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 68/266 (25%), Gaps = 40/266 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 353 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 407
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 408 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFGRLARRVRDAARAQFAVTIALA 467
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 468 PLTVLWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHALVQALM 526
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + A + P+ + + + + +
Sbjct: 527 RLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCAAPLAWLPLV 580
Query: 218 SFSPDLLISEKGNLVALVDKNTLISN 243
+ +P L AL
Sbjct: 581 APAPLAPPDGAFRLTALDVGQGSAVL 606
>gi|146311089|ref|YP_001176163.1| hypothetical protein Ent638_1432 [Enterobacter sp. 638]
gi|145317965|gb|ABP60112.1| DNA internalization-related competence protein ComEC/Rec2
[Enterobacter sp. 638]
Length = 754
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 87/250 (34%), Gaps = 30/250 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ P+ P L + + A+ ++Y + E
Sbjct: 299 RQWSPWQVWLCCVAAILFVDPLAVLSQSL-----ALSAFAVVALIFWYQW---LPLPEGG 350
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
K + ++ L + + S FH + + L+ANI A+P+++F+
Sbjct: 351 YPRWIKPLITLLHLQLGMLFLLLPLQVSI---------FHGMSISSLVANIFAVPLVTFI 401
Query: 126 VIPAGLIAILLMILSL---DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L +LL + L + + + L ++ + + + + I E
Sbjct: 402 SVPLILAGMLLHLCPLPLFEECVWLLADKSLAVLFWL---LKGLPDGWI--DIDERWLPV 456
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITII----ILFTFPYSFSPDLLISEKGNLVA-LVDK 237
++ +L ++ + + ++ + +L+ S + + + G +A +++
Sbjct: 457 TLLPWLAIIGWRFRAWVSAPAISIVSSVLLTYLLWRPVKSEGWTVHMLDIGQGLAMVIEH 516
Query: 238 NTLISNYSNP 247
N Y
Sbjct: 517 NGRAILYDTG 526
>gi|260684056|ref|YP_003215341.1| putative competence membrane protein [Clostridium difficile CD196]
gi|260210219|emb|CBA64448.1| putative competence membrane protein [Clostridium difficile CD196]
Length = 433
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 63/186 (33%), Gaps = 33/186 (17%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +K D A + I GI + ++ +F + +I FY+
Sbjct: 241 IFIDRKKDGISALSLI-GIILIMNNPYVI----YNVSFQLSFLATLSILIFYNK------ 289
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + ++ + + F IP+ +I N++ +P
Sbjct: 290 ---------------INSIIKLSMVSLTISSNILTLPIIYYTFKGIPLLSIIGNLIIVPF 334
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LDIIIHIAHRISVAHNEFCIGRIPE 177
+ ++ L L++ + + ++++ ++ I + +IS + P+
Sbjct: 335 VGVIMY---LSIASLIVFKVSVVIAKIISFFNSTLIESIFFLLEKISNLSFAYINIESPK 391
Query: 178 TSFVTI 183
V I
Sbjct: 392 FYIVVI 397
>gi|254976070|ref|ZP_05272542.1| putative competence membrane protein [Clostridium difficile
QCD-66c26]
gi|255093461|ref|ZP_05322939.1| putative competence membrane protein [Clostridium difficile CIP
107932]
gi|255315203|ref|ZP_05356786.1| putative competence membrane protein [Clostridium difficile
QCD-76w55]
gi|255517872|ref|ZP_05385548.1| putative competence membrane protein [Clostridium difficile
QCD-97b34]
gi|255650988|ref|ZP_05397890.1| putative competence membrane protein [Clostridium difficile
QCD-37x79]
Length = 417
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 63/186 (33%), Gaps = 33/186 (17%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +K D A + I GI + ++ +F + +I FY+
Sbjct: 225 IFIDRKKDGISALSLI-GIILIMNNPYVI----YNVSFQLSFLATLSILIFYNK------ 273
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + ++ + + F IP+ +I N++ +P
Sbjct: 274 ---------------INSIIKLSMVSLTISSNILTLPIIYYTFKGIPLLSIIGNLIIVPF 318
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LDIIIHIAHRISVAHNEFCIGRIPE 177
+ ++ L L++ + + ++++ ++ I + +IS + P+
Sbjct: 319 VGVIMY---LSIASLIVFKVSVVIAKIISFFNSTLIESIFFLLEKISNLSFAYINIESPK 375
Query: 178 TSFVTI 183
V I
Sbjct: 376 FYIVVI 381
>gi|326622660|gb|EGE29005.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Dublin str.
3246]
Length = 701
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 81/247 (32%), Gaps = 33/247 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 246 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 299
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 300 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 348
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ + I
Sbjct: 349 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGW--VNIDNRWQWL 403
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS-------PDLLISEKGNLVALV 235
++ +L ++ + N+ + + ++L ++P +L +G +A+V
Sbjct: 404 TLLPWLTLIAWRLNV-WRTCPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIV 462
Query: 236 DKNTLIS 242
+ +I
Sbjct: 463 RGDKVIL 469
>gi|53719884|ref|YP_108870.1| hypothetical protein BPSL2274 [Burkholderia pseudomallei K96243]
gi|134277853|ref|ZP_01764568.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 305]
gi|217420501|ref|ZP_03452006.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 576]
gi|52210298|emb|CAH36277.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|134251503|gb|EBA51582.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 305]
gi|217395913|gb|EEC35930.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 576]
Length = 856
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 68/266 (25%), Gaps = 40/266 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 353 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 407
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 408 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFGRLARRVRDAARAQFAVTIALA 467
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 468 PLTVLWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHALVQALM 526
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + A + P+ + + + + +
Sbjct: 527 RLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCAAPLAWLPLV 580
Query: 218 SFSPDLLISEKGNLVALVDKNTLISN 243
+ +P L AL
Sbjct: 581 APAPLAPPDGAFRLTALDVGQGSAVL 606
>gi|300869482|ref|ZP_07114065.1| ComEC/Rec2-related protein [Oscillatoria sp. PCC 6506]
gi|300332539|emb|CBN59263.1| ComEC/Rec2-related protein [Oscillatoria sp. PCC 6506]
Length = 821
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 53/161 (32%), Gaps = 19/161 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + K + + + + I + S
Sbjct: 371 IWDLGFQLSFLATLGLLVTAPA-------------IMKWLDWLPPAIASII--AVPIACS 415
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ F+ + Y ++ NI+A P+L V I + A+ +I + ++ +
Sbjct: 416 IWVLPLQLYIFNVVSPYSILVNIIAAPLLWIVSIGGMISALAALIWPPAGSALASLLHYP 475
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTI--VVEFLLM 190
+I +A S +G + E + + ++ +
Sbjct: 476 AKGLIEVAQYFSQLPGNSVAVGTLSELQLIALYGIIGLVWF 516
>gi|91203977|emb|CAJ71630.1| similar to competence protein ComA [Candidatus Kuenenia
stuttgartiensis]
Length = 829
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/171 (11%), Positives = 50/171 (29%), Gaps = 14/171 (8%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ +++D + T L PS LF F I Y + +
Sbjct: 352 VHRQWDITSSIFTAILFILLQNPS-----DLFSIGFQLSIMATMGIVYGAPKIEAVLFKT 406
Query: 64 SHNTWTWK------KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
+ + ++ IK+ + + +FH Y + +I+
Sbjct: 407 ALFVEKLQAPEERGRLFFIKKYV--RKLLCVSLAAWIATLPLTAYYFHLFTPYVSVISII 464
Query: 118 AIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAH 167
P+ +++ ++ I ++ + + + I +S
Sbjct: 465 VFPLFWIIIVSGIVLLFFGTIFPPFASVFAWLASATDIALESIVSTLSFLP 515
>gi|213612694|ref|ZP_03370520.1| hypothetical protein SentesTyp_09409 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 445
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 18 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 71
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 72 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 120
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 121 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTL 177
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 178 LPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 237
Query: 239 TLIS 242
+I
Sbjct: 238 KVIL 241
>gi|114330743|ref|YP_746965.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas eutropha C91]
gi|114307757|gb|ABI59000.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas eutropha C91]
Length = 799
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/221 (14%), Positives = 70/221 (31%), Gaps = 38/221 (17%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P PG F + ++ I S I S + W
Sbjct: 354 DPWSVIAPG-----FWLSFAAVALICLVVSG--RIGRSSAVTGWV--------------- 391
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
I + L+ F I + +AN +AIP+++ V++P L+A + + L +
Sbjct: 392 --RIQWAITLGLFPLLLILFQQISLISPVANAVAIPVITLVIVPLALLATIPGLEFLLLV 449
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT-------- 195
+ L I + + + + P + + + ++
Sbjct: 450 AYPF----LQITMAVLQWLGELPLATWQQHAPPLWAVIAATIGVKWLLLPGGPGLGVSAG 505
Query: 196 -NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
R +G + ++ P + L + + G +++V
Sbjct: 506 FPARWLGILAGLPLFLVFPEKPAAGELWLTVLDVGQGLSVV 546
>gi|205352190|ref|YP_002225991.1| hypothetical protein SG0925 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205271971|emb|CAR36815.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326627234|gb|EGE33577.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 754
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 80/246 (32%), Gaps = 31/246 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 299 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 353 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 401
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ + I
Sbjct: 402 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGW--VNIENRWQWL 456
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF------SPDLLISEKGNLVALVD 236
++ +L ++ + N+ H + ++++ + +L +G +A+V
Sbjct: 457 TLLPWLTLIAWRLNVWHTCPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVR 516
Query: 237 KNTLIS 242
+ +I
Sbjct: 517 GDKVIL 522
>gi|90406905|ref|ZP_01215096.1| recombination protein [Psychromonas sp. CNPT3]
gi|90311947|gb|EAS40041.1| recombination protein [Psychromonas sp. CNPT3]
Length = 779
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 72/214 (33%), Gaps = 13/214 (6%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+LS+ ++ + I ++ P + Y I I + + Y
Sbjct: 307 ILSMRRQCSLLDIVPLLLCILLINDPLAVLS-----MSLWLSYGAI-CIIFLFCWRFPAY 360
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ +++ ++ + +A I +F + V G++ N+ AIP
Sbjct: 361 FKRPKKSGVLRRVGH-----YFKLLLGVQFAITALMIPLQIHYFSALSVGGMLMNLFAIP 415
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ S VIP L+A+ + S+ V+ +D ++ + + + S
Sbjct: 416 VFSLCVIPLILLALFCSLGSI--PVATVLISVVDTLLGYFFFLLDNLPAYYFYFSAQQSA 473
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + L V + ++ + L
Sbjct: 474 MILSLFTLFFVSWVITWHGVYALTARFVVCSLLI 507
>gi|256847007|ref|ZP_05552453.1| competence protein [Lactobacillus coleohominis 101-4-CHN]
gi|256715671|gb|EEU30646.1| competence protein [Lactobacillus coleohominis 101-4-CHN]
Length = 724
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 84/273 (30%), Gaps = 29/273 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+T+ + I RL ++ S + + G ++ +
Sbjct: 257 ISLTRAVLMMELGLFAQLIPRLRHLDS--------WSLSLIIQLVITPGILLNLGGRLSY 308
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S K S + Q+ I + + + + + ++ N L IP+
Sbjct: 309 LLSFTLQRIKWQSKLHQTIGMTIVSLPVILNAT----------YQVHLLTIVINWLMIPL 358
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRI-PETS 179
S V+ P + ++ ++ +M G L + ++ G++ +
Sbjct: 359 FSLVITP---LVLICALMGKVCPLVVLMGNGGLLYFQRVIQWLANLPGTLVFGKLNTALT 415
Query: 180 FVTIVVEFLLMVFCKTN--IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
F I+ L + K +R I + T I I +G+ + + +
Sbjct: 416 FWLIISSILAIAGVKRRKLLRWIIILTYASTFIWYHYPLTGEVTFFDI-GQGDSILIREP 474
Query: 238 ---NTLISNYSNPPSFIFSQWKSALITPFHEAP 267
++ + P F WK A
Sbjct: 475 FNRRIMMIDTGGRPQFKVPHWKQARYQDDDAQR 507
>gi|320105758|ref|YP_004181348.1| DNA internalization-like competence protein ComEC/Rec2 [Terriglobus
saanensis SP1PR4]
gi|319924279|gb|ADV81354.1| DNA internalization-related competence protein ComEC/Rec2
[Terriglobus saanensis SP1PR4]
Length = 925
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 75/202 (37%), Gaps = 11/202 (5%)
Query: 53 YSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL 112
++ + ++ ++ S S+ ++ +FH + + L
Sbjct: 484 MVASALLPRNPQIAARALARV--VRGSAWLLELVLFSAMAELIMSLPMMIYFHRLTPFAL 541
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFC 171
AN++ I ++ F++ ++ +L + + P GV+ G L + + HR+S+AH
Sbjct: 542 PANLICIVLIPFLMGSLAILFVLACVGAPVAAPAGVITAGLLHAVTAVLHRVSLAHGADW 601
Query: 172 IGRIPET----SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
P + +F ++V + ++ IG +++ ++ L E
Sbjct: 602 RVAEPSSLHVVAFCILMVATVWLLRGSCKAAWIGVVLLPTMAALILWPIRPR----LSPE 657
Query: 228 KGNLVALVDKNTLISNYSNPPS 249
+ + A+ ++P
Sbjct: 658 RLEMTAVDVGQGDSIFVASPDG 679
>gi|256822599|ref|YP_003146562.1| DNA internalization-like competence protein ComEC/Rec2 [Kangiella
koreensis DSM 16069]
gi|256796138|gb|ACV26794.1| DNA internalization-related competence protein ComEC/Rec2
[Kangiella koreensis DSM 16069]
Length = 780
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 15/111 (13%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + I ++ ++ W K IK + + +
Sbjct: 350 SFWMTFIAVLII-----SLILMGRTQQKTGWKQKLKLLIKLQLGI----------TLTLA 394
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
I + +F G+ NI+ IP+ S +++PA ++ LL + + +
Sbjct: 395 IPSLLYFQQASFLGMFVNIIVIPVFSLIILPAIFLSFLLSLFGVAWPLSQI 445
>gi|160940334|ref|ZP_02087679.1| hypothetical protein CLOBOL_05224 [Clostridium bolteae ATCC
BAA-613]
gi|158436914|gb|EDP14681.1| hypothetical protein CLOBOL_05224 [Clostridium bolteae ATCC
BAA-613]
Length = 850
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 56/189 (29%), Gaps = 27/189 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+ F + + AI W + + + I
Sbjct: 368 LYHSGFELSFGAVLAI-------------SGLGGWVQSFLELERAWEKTLL---ISLSVQ 411
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
+ ++ H+ P+YG+ N+L IP++S +++ +G++ I+L + + G
Sbjct: 412 IVLTPIVLYHYFQHPLYGIFLNLLVIPLVS-ILMYSGILGIVLGSFWIQG-GVAAVGAGH 469
Query: 153 --LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE------FLLMVFCKTNIRHIGSIM 204
L + + P + + +++ + I +
Sbjct: 470 YILRFYELLCKFAEGLPGYSLVLGRPSPGSLVMYFGIHGMGTAVVLFCIRGRSAFIRAKS 529
Query: 205 IGITIIILF 213
L
Sbjct: 530 PARCNAYLA 538
>gi|209809510|ref|YP_002265048.1| putative competence-related protein [Aliivibrio salmonicida
LFI1238]
gi|208011072|emb|CAQ81490.1| putative competence-related protein [Aliivibrio salmonicida
LFI1238]
Length = 768
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/195 (11%), Positives = 60/195 (30%), Gaps = 26/195 (13%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + + + IY + + K + + +
Sbjct: 343 MSFWLSFTAVLTVLTTL-HIYQIYIKNTESPRLTKILQIL----------AVQFGLFVFL 391
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI--PFGVMAWGLD 154
F + + + N++A+P +S V +P L A+++ + + + + L
Sbjct: 392 LPVQSYFFGGVSLLSPLINLIAVPWVSMVTVPITLFAVVVSFADSEWLKGLWQLSDLSLL 451
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSF---VTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+ H+A + + + F + I + + K I+ +++
Sbjct: 452 PVWHLAESV---EGSWISLSSDISLFIIGLIIFLGLMAFFSFK-------IILPIFALLM 501
Query: 212 LFTFPYSFSPDLLIS 226
L P+ +
Sbjct: 502 LLMAVTKSKPEWQVD 516
>gi|308174346|ref|YP_003921051.1| DNA channel for uptake in competent cells [Bacillus
amyloliquefaciens DSM 7]
gi|307607210|emb|CBI43581.1| DNA channel for uptake in competent cells [Bacillus
amyloliquefaciens DSM 7]
Length = 745
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 66/237 (27%), Gaps = 31/237 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+ F + S + I A
Sbjct: 285 LWQAGFQLSFA------------------VSASLILSSSILKKAGKSRLAGLAMASFIAE 326
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAW 151
S+ FL+ HF I + N++ +P + VIP +I LL++LS + F +
Sbjct: 327 LSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPVSVIGFLLLLLSRQMGECLFDMFDL 386
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPET---------SFVTIVVE--FLLMVFCKTNIRHI 200
+ + + I P+ F + K+ +
Sbjct: 387 VMKPVHDFITYAASVDLFTMIVSKPDFLSLLLLAVSVFTLFAALEKGGFLKLRKSALFFC 446
Query: 201 GSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
+ I + + D+ + + A K T++ + ++ WK
Sbjct: 447 AVLAYLICRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYPGESWKE 503
>gi|237741138|ref|ZP_04571619.1| COME operon protein 3 [Fusobacterium sp. 4_1_13]
gi|229430670|gb|EEO40882.1| COME operon protein 3 [Fusobacterium sp. 4_1_13]
Length = 396
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 19/160 (11%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
Y+ + A +S P +F +F Y + AI Y +
Sbjct: 220 YEKIDLGKALFVSAVISVLINP--TAIFSVSFQLSYGAMIAIIYIFPY------------ 265
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
KKI+ K L+ I + +F+ I +I+N++ +P+ SF +
Sbjct: 266 --IKKINYKKFKILDYILFTTTI--QIFLIPITVYYFNSIQFLSVISNLILLPLASFYIT 321
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
IA+ L L + V+ I+I+ S
Sbjct: 322 -INYIALFLENFYLSFLLKPVIEILYKILIYFIDFFSELP 360
>gi|237808980|ref|YP_002893420.1| DNA internalization-related competence protein ComEC/Rec2
[Tolumonas auensis DSM 9187]
gi|237501241|gb|ACQ93834.1| DNA internalization-related competence protein ComEC/Rec2
[Tolumonas auensis DSM 9187]
Length = 738
Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/191 (11%), Positives = 57/191 (29%), Gaps = 33/191 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ I + P F F + + +G + +
Sbjct: 291 REWSGIRIWLFALAIMLVIEPWSV-----FSAGFWLSFIAVGILGVAGFLWRKPSL---- 341
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W + + ++ + + F + + ++ N+ A P +F
Sbjct: 342 --WQIQWLMTLLLVPVQLVL------------------FDGLSISSVLVNLPAGPWFTFS 381
Query: 126 VIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++P LI+ LL+ + L I F + LD ++ I + + + +
Sbjct: 382 IVPVALISGLLVPIFPSLAYIGFWLCDLQLDWLMSALEWIQTWGSGWMAISFRQQLLLFW 441
Query: 184 VVEFLLMVFCK 194
+ +
Sbjct: 442 ALAGWF--IWR 450
Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 83/245 (33%), Gaps = 11/245 (4%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L+++ K + ARL P G P F+ +G++A G S + +
Sbjct: 107 LTLSDKKTFLKRGDKLHIRARLKIPHGLGNPAGFNAERWLLGQGVTATGSISSFKLLYQA 166
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S K + Q F YG + GLI +++AI
Sbjct: 167 DSSWRDNWLMKSRQLMQKFRQPELLMALIYGEQQDVDKADWQ--TLRDTGLI-HLIAISG 223
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ +I I + L L L + GL ++ IA ++ ++ P +
Sbjct: 224 MHIGLIAW--IGMALSRLLLQRWSEKL--PGLHWLVGIA--FALLYSALADFSAPTVRAL 277
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
+++ ++ + + I + + I+++ FS +S V ++ +
Sbjct: 278 CMLIIWIALRLWQREWSGIRIWLFALAIMLVIEPWSVFSAGFWLSF--IAVGILGVAGFL 335
Query: 242 SNYSN 246
+
Sbjct: 336 WRKPS 340
>gi|198244225|ref|YP_002214907.1| hypothetical protein SeD_A1048 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197938741|gb|ACH76074.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
Length = 737
Score = 53.7 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 81/247 (32%), Gaps = 33/247 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 282 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 335
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 336 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 384
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ + I
Sbjct: 385 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGW--VNIDNRWQWL 439
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS-------PDLLISEKGNLVALV 235
++ +L ++ + N+ + + ++L ++P +L +G +A+V
Sbjct: 440 TLLPWLTLIAWRLNV-WRTCPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIV 498
Query: 236 DKNTLIS 242
+ +I
Sbjct: 499 RGDKVIL 505
>gi|67642985|ref|ZP_00441735.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei GB8 horse 4]
gi|121601523|ref|YP_993510.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei SAVP1]
gi|124384467|ref|YP_001029061.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei NCTC 10229]
gi|126451329|ref|YP_001081018.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei NCTC 10247]
gi|254178410|ref|ZP_04885065.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei ATCC 10399]
gi|254357983|ref|ZP_04974256.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei 2002721280]
gi|121230333|gb|ABM52851.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei SAVP1]
gi|124292487|gb|ABN01756.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei NCTC 10229]
gi|126244199|gb|ABO07292.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei NCTC 10247]
gi|148027110|gb|EDK85131.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei 2002721280]
gi|160699449|gb|EDP89419.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei ATCC 10399]
gi|238524218|gb|EEP87652.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei GB8 horse 4]
Length = 856
Score = 53.7 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 68/266 (25%), Gaps = 40/266 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 353 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 407
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 408 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFGRLARRVRDAARAQFAVTIALA 467
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 468 PLTVLWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHTLVQALM 526
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + A + P+ + + + + +
Sbjct: 527 RLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCAAPLAWLPLV 580
Query: 218 SFSPDLLISEKGNLVALVDKNTLISN 243
+ +P L AL
Sbjct: 581 APAPLAPPDGAFRLTALDVGQGSAVL 606
>gi|188994383|ref|YP_001928635.1| probable competence protein [Porphyromonas gingivalis ATCC 33277]
gi|188594063|dbj|BAG33038.1| probable competence protein [Porphyromonas gingivalis ATCC 33277]
Length = 494
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 54/187 (28%), Gaps = 20/187 (10%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I + P +D F Y +++I F+ + +
Sbjct: 322 AAAACITLVIDPL-----SFYDVGFVLSYAAVASILIFFRPLASLLPDVRQPLLRLCRD- 375
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ A +F + + L N+ + +L +IP LI +
Sbjct: 376 ----------AMALCLAAQAFTLPLAAHYFGHVGIIFLWVNL-PLTLLVVFLIPLSLIYM 424
Query: 135 LLMILSLDNIPFG-VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV-- 191
+L + L + V+ D + + + P V ++ LL V
Sbjct: 425 VLAAVGLPLMLLPRVVGICADGVERLVTAAAAVSPSVEYAWQPSMPVVLCIMAVLLAVGI 484
Query: 192 FCKTNIR 198
+ N R
Sbjct: 485 LWRANRR 491
>gi|53723788|ref|YP_103313.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei ATCC 23344]
gi|52427211|gb|AAU47804.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia mallei ATCC 23344]
Length = 842
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 68/266 (25%), Gaps = 40/266 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 339 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 393
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 394 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFGRLARRVRDAARAQFAVTIALA 453
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 454 PLTVLWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHTLVQALM 512
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + A + P+ + + + + +
Sbjct: 513 RLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCAAPLAWLPLV 566
Query: 218 SFSPDLLISEKGNLVALVDKNTLISN 243
+ +P L AL
Sbjct: 567 APAPLAPPDGAFRLTALDVGQGSAVL 592
>gi|261416666|ref|YP_003250349.1| DNA internalization-related competence protein ComEC/Rec2
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|261373122|gb|ACX75867.1| DNA internalization-related competence protein ComEC/Rec2
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|302326309|gb|ADL25510.1| DNA internalization competence protein ComEC/Rec2-like protein
[Fibrobacter succinogenes subsp. succinogenes S85]
Length = 807
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 13/166 (7%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-IPKMIYSSESHNTWTWKKIS 74
+ L PS PG F + + I P + W+KI
Sbjct: 350 VALLLIILPEPSVIWNPG-----FQLSFAATAGIIIGTPHNPTKLLPDSFKQNKLWQKIQ 404
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + + + + FLI HF + + NI+ +P +S + + AGL A
Sbjct: 405 AFAID-----PTYVTLCATLATAPFLIHHFKTLSPFAWFGNIIIVPAIS-LGMQAGLFAQ 458
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETS 179
L I + + L + + +S + +G
Sbjct: 459 LSPIDFICGTFCAAARFFLRLASLLTRILSDSAAASMTVGPFSPAV 504
>gi|160933054|ref|ZP_02080443.1| hypothetical protein CLOLEP_01896 [Clostridium leptum DSM 753]
gi|156868128|gb|EDO61500.1| hypothetical protein CLOLEP_01896 [Clostridium leptum DSM 753]
Length = 750
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/263 (11%), Positives = 70/263 (26%), Gaps = 33/263 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I K+ DP + + + P GL + I F + +
Sbjct: 313 IRKQADPINSLGFAMLVLTVPNPFAAGDTGLL-----LSFSATLGILLFSGRIQARLNRW 367
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL------ 117
+ + K++ + S + F + + ++N+L
Sbjct: 368 TESIGVLKRLFR-----GLNSTIAATVSATVFTSPIVALTFGELSLVAPLSNLLMEFPAD 422
Query: 118 AIPILSFVVIPA---GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
+ + F+ +I L M L + ++ A ++
Sbjct: 423 IMLLCGFLTSIFYYIPVINFLAMPFGLGA------GIAANYLMECAAWLASLPMASIPVT 476
Query: 175 IPETSFVTIVVEFLLMVF----CKT-NIRHIG---SIMIGITIIILFTFPYSFSPDLLIS 226
IV +V + +R + ++ T + + +L +
Sbjct: 477 QEVLLISLIVFAAASVVIVMIRWEGFRLRLTACTTAFLLVFTALGAGFEQEALEIGVLNT 536
Query: 227 EKGNLVALVDKNTLISNYSNPPS 249
G+ V L+ S +
Sbjct: 537 GNGSSVVLIRDQQAAVLCSGGGN 559
>gi|113477315|ref|YP_723376.1| ComEC/Rec2-like protein [Trichodesmium erythraeum IMS101]
gi|110168363|gb|ABG52903.1| ComEC/Rec2-related protein [Trichodesmium erythraeum IMS101]
Length = 816
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 56/162 (34%), Gaps = 19/162 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+++ F + + K+++ + A I S
Sbjct: 388 IWNLGFQLSFLATLGLLVTLPP-------------LTKRLNMLPSGIA--YLAAIYISAS 432
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
L+ F+ + Y ++ NI+ P+++ + + + A+L +I ++ ++ +
Sbjct: 433 VWVLPLLLSVFYVVSPYAILVNIIVAPLVTVITVGGFISAMLALIYPDAGSLSAMILHFP 492
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFC 193
+ I+I I S + +G I V + L+
Sbjct: 493 VKILIEIVQFFSRLPGNQVAVGAISVYQLVVLY--GLIFTTW 532
>gi|157961593|ref|YP_001501627.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
pealeana ATCC 700345]
gi|157846593|gb|ABV87092.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella pealeana ATCC 700345]
Length = 812
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 56/203 (27%), Gaps = 19/203 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP------- 56
+ + + + L P +F + + I +
Sbjct: 295 LQRHSSSWERLLYALFVVLLMDPLSMLS-----ASFWLSFSALGIILLTVTRHTFTPKNL 349
Query: 57 --KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
+ + + + +K + + + F + L
Sbjct: 350 SASLDSGAMAQANLSEHATLWLKFRNACVAFWAVQWRLTLGLCLVQAIFFSGTSLVSLAV 409
Query: 115 NILAIPILSFVVIPAGLIAILLMIL----SLDNIP-FGVMAWGLDIIIHIAHRISVAHNE 169
N+L +P + +VIP L+++L+ I L F V A + + I + S
Sbjct: 410 NLLLVPWFTLLVIPLCLLSLLVFIFATSLGLSAAGIFWVAAKSMVPVTAILNYSSQFEFV 469
Query: 170 FCIGRIPETSFVTIVVEFLLMVF 192
+ + + + L +
Sbjct: 470 WLALSDQVIAALMVAFIGLYLTI 492
>gi|45656258|ref|YP_000344.1| hypothetical protein LIC10355 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599492|gb|AAS68981.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 769
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 64/190 (33%), Gaps = 21/190 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+K P I L P + +F + ++ I +F+S P I +
Sbjct: 225 RKLRPVDLLLGSAWILWLLDPIR-----FYSVSFCLSFGAVTGI-FFFSYPIRIACN--- 275
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ I + +I L+ F ++ N++ +P+ +
Sbjct: 276 ---FLSDENKISYFLKENL--SISFSAGLGTMPVLLLAFESYSFGSILLNLIMVPLAG-I 329
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
++P ++L+ ++ L + + + + I+I+++ +S F
Sbjct: 330 LLPILYFSLLIQKTKLILLTEPIWSITEFLIQILIYLSENLSK-PLGFYKEMKGSVWIGI 388
Query: 183 IVVEFLLMVF 192
++L+
Sbjct: 389 --TGWILLCI 396
>gi|24213106|ref|NP_710587.1| hypothetical protein LA_0406 [Leptospira interrogans serovar Lai
str. 56601]
gi|24193807|gb|AAN47605.1| hypothetical protein LA_0406 [Leptospira interrogans serovar Lai
str. 56601]
Length = 769
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 64/190 (33%), Gaps = 21/190 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+K P I L P + +F + ++ I +F+S P I +
Sbjct: 225 RKLRPVDLLLGSAWILWLLDPIR-----FYSVSFCLSFGAVTGI-FFFSYPIRIACN--- 275
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ I + +I L+ F ++ N++ +P+ +
Sbjct: 276 ---FLSDENKISYFLKENL--SISFSAGLGTMPVLLLAFESYSFGSILLNLIMVPLAG-I 329
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
++P ++L+ ++ L + + + + I+I+++ +S F
Sbjct: 330 LLPILYFSLLIQKTKLILLTEPIWSITEFLIQILIYLSENLSK-PLGFYKEMKGSVWIGI 388
Query: 183 IVVEFLLMVF 192
++L+
Sbjct: 389 --TGWILLCI 396
>gi|213650538|ref|ZP_03380591.1| hypothetical protein SentesTy_26863 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length = 536
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 73/244 (29%), Gaps = 27/244 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++ + ++Y +
Sbjct: 81 RQWSGWQVWCCCLAAIIFADPVAVISQSL-----WLSAFAVAGLLFWYQWFPAPNGNFP- 134
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + FH I V ++AN+ A+P ++FV
Sbjct: 135 -----------RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFV 183
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++L L+ + + L + ++ ++ +
Sbjct: 184 TVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYL---LNALPQGWVNIDNRWQWLTL 240
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF----PYSFSPDLLISEKGNLVALVDKN 238
+ L+ + G+ ++ + + +L +G +A+V +
Sbjct: 241 LPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRPINASGWQVHMLDVGQGLAIAIVRGD 300
Query: 239 TLIS 242
+I
Sbjct: 301 KVIL 304
>gi|19553546|ref|NP_601548.1| competence protein ComE-like protein [Corynebacterium glutamicum
ATCC 13032]
gi|62391190|ref|YP_226592.1| multitransmembrane, metal-binding protein [Corynebacterium
glutamicum ATCC 13032]
gi|41326530|emb|CAF21012.1| Predicted multitransmembrane, metal-binding protein
[Corynebacterium glutamicum ATCC 13032]
Length = 554
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 76/247 (30%), Gaps = 23/247 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + +P ++ I L S A + F + I ++Y +
Sbjct: 277 SSRMEPMH-GLSLSVICLLFYDSNLAVH----YGFLLSCAATAGIVMLQP---LLYRAIG 328
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
WK + ++F I A++ T + I + ++AN+L +
Sbjct: 329 PPLAVWKVPDIVVRAFAVSIAADLVTIPIIALMA------RQISLVAVLANVLVELAVPP 382
Query: 125 VVIPAGLIAIL-LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+ + + + L+ ++ ++ I H+A N
Sbjct: 383 ITLLGLIAVLASLLPWPVEYPLLKIIEPFTWWIHHVAKWCQQLPNSTLEISAGWAGIAWA 442
Query: 184 VVEFLLMV--FCKTNIRHIGSIMIGITIIILFTFPYSFSPD------LLISEKGNLVALV 235
+ + +V K +R + + + + D ++I++ L +
Sbjct: 443 CMAAVWVVVIIYKGYVRTLAVCCVCFFLFGAWNNRLPAQIDPTELRFVIIADDSELTDVP 502
Query: 236 DKNTLIS 242
+ LI
Sbjct: 503 EHAELII 509
>gi|153000194|ref|YP_001365875.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
baltica OS185]
gi|151364812|gb|ABS07812.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS185]
Length = 795
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 47/347 (13%), Positives = 93/347 (26%), Gaps = 47/347 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + I L P G F + + I Y I ++ S
Sbjct: 296 KRFSTAWERLLFALFIVLLLDPLACLSAG-----FWLSFCALGIILYTLEIQPREFTPAS 350
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + ++ + + F + V+ L NILA+P SF
Sbjct: 351 T------RRARLRTGMMQFWAIQWRLSLGLGLLQAAL--FGGVSVHSLWMNILAVPWFSF 402
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR----------ISVAHNE---FC 171
VVIP + + L + ++ ++ IS
Sbjct: 403 VVIPLAMAGFVCWWLG-TALGLSHFGLSSLGVLRLSDWSLSPYAQLLDISQQLPAHWLAL 461
Query: 172 IGRIPETSFVTIVVEFLL--------MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
+ F +V L + + + + + + + L+ + +
Sbjct: 462 SDSLLALGFCALVGGVLWHYVPKYKHYIAWLSLLSLL-FMPTLLFCMTLWFPVQTHRWTM 520
Query: 224 LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + G +A+V + N FI+ +A F A V L+ K +
Sbjct: 521 HLLDVGQGLAVVIE-------KNGKGFIYDT-GAAFGDDFSYAERVILPFLKAKGIQEID 572
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDI 330
I+ S V + C+ I
Sbjct: 573 YIVISHSDNDHA---GGASVLIEAYPKAWVITDVAGFSGQDCRPRQI 616
>gi|301047826|ref|ZP_07194878.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 185-1]
gi|300300318|gb|EFJ56703.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 185-1]
Length = 411
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNI 144
+ + I FH I + IAN+ AIP+++F+ +P L A+++ L+
Sbjct: 21 LQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQG 80
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + L ++ + + + L+V + N R + ++
Sbjct: 81 LWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTFSP--WFLLVVWRLNAWRTLPAM 135
Query: 204 MIGITIIILFTFPYSFSPD 222
+ + +++ PD
Sbjct: 136 CVAVGLLMCLPLWQKPRPD 154
>gi|297617831|ref|YP_003702990.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophothermus lipocalidus DSM 12680]
gi|297145668|gb|ADI02425.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophothermus lipocalidus DSM 12680]
Length = 794
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/248 (11%), Positives = 68/248 (27%), Gaps = 31/248 (12%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+ P + G+ L P + LF+ +F + + + Y + + +
Sbjct: 300 REPNLPNALAVSGLIMLVLN--PVW--LFELSFQLSFLATWGLIWLYPAWRQMIPYQGK- 354
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
I A+ ++ F L ANI + +
Sbjct: 355 ---------------VVDAILIPLAAQAATLPIIVHSFSLFSFSSLFANIFGAYLSGAAL 399
Query: 127 IPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIV 184
I + ++ + L + +D+I ++ +S + P S +
Sbjct: 400 ILGLIGFLVSTVFAPLAAVFLLPAGLAVDVITEMSRWLSYLPGSYLWVAAPPFWSVIGFY 459
Query: 185 VEFLLM--VFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-------LLISEKGNLVALV 235
+ + KT+ R + + + + D L +G+ + +
Sbjct: 460 AGLVCLSSTRVKTDKRLLALSCFLLVVYLGLLLVTPGFRDKGWLEVTFLDVGQGDSILVK 519
Query: 236 DKNTLISN 243
Sbjct: 520 TPQGRFML 527
>gi|330962640|gb|EGH62900.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 738
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/217 (13%), Positives = 76/217 (35%), Gaps = 26/217 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S W+ S ++
Sbjct: 314 VLIFEPLVTLQPG-----FWLSFAAVGILLLIF----------SGRLGAWRWWQSWTRAQ 358
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN++A+P +S +V+P L+ LL+ +
Sbjct: 359 WLIAIGLLPILLALNLP---------ISLSGPFANLVAVPWVSVIVLPPALLGTLLLPVP 409
Query: 141 L-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
L + L+ + R++ + +P ++ + LL++ + +R
Sbjct: 410 LLGEGLLWLAGGALEWLFMFLDRVAAVLPAWLPSAVPGWAWGLSFLGGLLLLLPRGVPMR 469
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+G ++ + + ++L + G +A++
Sbjct: 470 PLGWPLLLLCVFPPLEEVPDGQVEVLQLDVGQGLAIL 506
>gi|149277766|ref|ZP_01883906.1| competence protein [Pedobacter sp. BAL39]
gi|149231454|gb|EDM36833.1| competence protein [Pedobacter sp. BAL39]
Length = 588
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 50/159 (31%), Gaps = 17/159 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + + Y T W + + +
Sbjct: 378 IWDTGFQLSFLAVLGLIYLQPK----------LTVLWPIKNILLNQLWKS--TTMSCAAQ 425
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
F I +FH P+Y +I+N+ + ++ ++ I + M +I + W +
Sbjct: 426 LFTFPFSIYYFHQFPLYFMISNLFILLPIAALMYLGLAILLFRM-----SILIPLFEWLI 480
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+I+ G + + ++ +L+
Sbjct: 481 IFTNKSLTQIAELPYSSITGIWISKTMLIVLCVSILLGI 519
>gi|332519000|ref|ZP_08395467.1| ComEC/Rec2-related protein [Lacinutrix algicola 5H-3-7-4]
gi|332044848|gb|EGI81041.1| ComEC/Rec2-related protein [Lacinutrix algicola 5H-3-7-4]
Length = 672
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 13/159 (8%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F Y + AI K + W+ + I + +G
Sbjct: 351 DVGFQLSYLAVIAIVAIQPRLKKL----------WQPKNYILNKIWD--FGTVGVAAQCG 398
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ +FH P +ANI+ IP L ++ L+ IL ++ L V + +
Sbjct: 399 VLPISLYYFHQFPGLFFVANIVIIPFLGIILGIGILVIILALLNILPQFLVDVFSGIISA 458
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+ + ++ F I ++ I L++ +
Sbjct: 459 MNKLMEWLA-LQESFLFKDISFSAIKVIAAYLLIVAIVQ 496
>gi|52424986|ref|YP_088123.1| ComEC protein [Mannheimia succiniciproducens MBEL55E]
gi|52307038|gb|AAU37538.1| ComEC protein [Mannheimia succiniciproducens MBEL55E]
Length = 806
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 48/156 (30%), Gaps = 25/156 (16%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + G+ + P +F + ++ +Y I + + T
Sbjct: 315 WQLFLRVIGVLFIFDPLMVLS-----NSFWLSVCAVFSLILWYQIFPLNLLEWKGKSVTD 369
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
K + + + S + F I + G AN++ +P+ SF+++P
Sbjct: 370 GKFAWLFGLIH------LQLGLFCLFSPMQLMTFQGISLAGFWANLIIVPLFSFLLVPVI 423
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
L A+ S IA ++
Sbjct: 424 LFAL----FSNGAWESW----------RIADWLAQW 445
>gi|120554664|ref|YP_959015.1| DNA internalization-related competence protein ComEC/Rec2
[Marinobacter aquaeolei VT8]
gi|120324513|gb|ABM18828.1| DNA internalization-related competence protein ComEC/Rec2
[Marinobacter aquaeolei VT8]
Length = 806
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/333 (11%), Positives = 94/333 (28%), Gaps = 37/333 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ + L P P D F + + + +S
Sbjct: 339 RQQSGWRPFVLALAAVLLMDPFAPL-----DQGFWLSFGAVGVLLAVFSG---------- 383
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ S L+ P+ G AN+LA+P +SF
Sbjct: 384 ---------RLGSSGWLSALLIAQLAVFVGLWPMLMLVHQGQPLAGFAANLLAVPWVSFA 434
Query: 126 VIPAGLIAILLMILSLDNIPFGV---MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
V+P + ++ +LS + V L + ++ + +P
Sbjct: 435 VMPVLFLGSIIALLSGGWLLPWVSAGFDLVLGALWWWLELVARFP-AGQMQPLPLPLAAG 493
Query: 183 IVVEFLLMVFCK-TNIR-HIGSIMIGITIIIL---FTFPYSFSPDLLISEKGNLVALVDK 237
+ + L + + R +G + +++ + +P++ + + G +++V +
Sbjct: 494 LALLALWGIRWRDWRWRALLGVTFLLLSVPWSGAGIGNSVTQAPEVRVLDVGQGLSVVVR 553
Query: 238 NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI 297
+ + + +A + E + + +
Sbjct: 554 AGGRVMVYDTGPEVAGVYSAADSVLVPNLRAMGVE----VIDLLVLSHADNDHAGGLETL 609
Query: 298 KKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDI 330
+ F + S + R +C+ +I
Sbjct: 610 SEHFAIKRVISGEPDLINGRVPAPVEACRPGNI 642
>gi|315287560|gb|EFU46966.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 110-3]
Length = 404
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNI 144
+ + I FH I + IAN+ AIP+++F+ +P L A+++ L+
Sbjct: 14 LQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQG 73
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + L ++ + + + L+V + N R + ++
Sbjct: 74 LWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTFSP--WFLLVVWRLNAWRTLPAM 128
Query: 204 MIGITIIILFTFPYSFSPD 222
+ + +++ PD
Sbjct: 129 CVAVGLLMCLPLWQKPRPD 147
>gi|224476696|ref|YP_002634302.1| hypothetical protein Sca_1210 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421303|emb|CAL28117.1| truncated protein, similar to ComEC late competence protein 3
(fragment 1) [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 627
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 38/124 (30%), Gaps = 22/124 (17%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + L S P +FD F + I I K + S +S
Sbjct: 286 SLIDILSIVFILLCISSPNI--IFDIGFQFSFLITFFILISSPILKSLKSIQS------- 336
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
I S+ + +F+ I G +N+L IP S ++ P +
Sbjct: 337 -------------VLAITFISQVSSFVISAYYFNQIQWIGFFSNLLFIPYYSLILFPLAI 383
Query: 132 IAIL 135
L
Sbjct: 384 FTYL 387
>gi|24374338|ref|NP_718381.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella oneidensis MR-1]
gi|24348890|gb|AAN55825.1|AE015719_7 DNA internalization-related competence protein ComEC/Rec2
[Shewanella oneidensis MR-1]
Length = 769
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 21/231 (9%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + ++ I Y ++ S +S+ T ++Q + + R ++
Sbjct: 320 GFWLSFSALAIILYTLESAQVARSIDSNQTLFATSCVRLRQFWAIQWRLSL------ILG 373
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM----ILSLDN-IPFGVMAWG 152
+ F + ++ L N+L +P S +VIP ++A L+ + +PF +
Sbjct: 374 LVQAIFFGGVSIHSLWMNMLVVPWFSLLVIPLSMLAFLVWWLGELFGQSWMVPFQLADLS 433
Query: 153 LDIIIHIAHRISVAHNEFCIGR--IPETSFVTIVVEFLLMVFCKTN--IRH---IGSIMI 205
L + + + ++ L + G + +
Sbjct: 434 LMPFGKLLEVSDELPGHWHSVSDGMLALCLCVLLALTLWRYMPHRRQYWQWHLMAGLLCV 493
Query: 206 GITIIILFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSFIFS 253
+ I + + L+ L A+V+K+T Y +F
Sbjct: 494 PMAIFVFQRIAQVETAQWTLHLLDVGQGLAAVVEKDTRALVYDTGAAFGED 544
>gi|311694958|gb|ADP97831.1| DNA internalization-related competence protein ComEC/Rec2 [marine
bacterium HP15]
Length = 802
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 59/194 (30%), Gaps = 25/194 (12%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + ++ + + + ++ L ++ G +
Sbjct: 361 DQGFWLSFAAVATLI-------------TVFSSRLAGTGWLRGLVLAQLAVFGGLWPILE 407
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGL 153
P+ GL+AN++AIP +S VV+P + LL + + + L
Sbjct: 408 ILG------QGQPLVGLLANLVAIPWVSLVVMPVLVAGGLLAAVVPGAAQLFLPIFDLTL 461
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
++ ++ IP + L + + + ++ L
Sbjct: 462 GVLWQWLMWLAQWQA----PDIPAGVPELVGWALLSVSVLCLPFAMFRLVAVLSAVLWLV 517
Query: 214 TFPYSFSPDLLISE 227
S + ++E
Sbjct: 518 YPAPSSERNSYVAE 531
>gi|255745361|ref|ZP_05419310.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholera CIRS 101]
gi|262153536|ref|ZP_06028665.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae INDRE 91/1]
gi|262167436|ref|ZP_06035143.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae RC27]
gi|255737191|gb|EET92587.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholera CIRS 101]
gi|262024133|gb|EEY42827.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae RC27]
gi|262030663|gb|EEY49298.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae INDRE 91/1]
Length = 709
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 39/222 (17%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 293 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 333
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDII 156
F + V ++ N++ IP S V++PA + +LLM++ W +D
Sbjct: 334 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWPWVDWT 390
Query: 157 ---IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITIII 211
+ A + + + + V V LL+ R + + +I
Sbjct: 391 FLPLDWALQFADVG--WWVVPSKVQGVVAASVAILLL------YRFMSLKACSLLLGMIG 442
Query: 212 LFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ + S +P ++ L +++++ Y S+
Sbjct: 443 LWWWFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 484
>gi|222151485|ref|YP_002560641.1| hypothetical protein MCCL_1238 [Macrococcus caseolyticus JCSC5402]
gi|222120610|dbj|BAH17945.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 743
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 84/246 (34%), Gaps = 29/246 (11%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
I I L P +F+ F Y + + ++
Sbjct: 304 AITFIINLI--MAPFV--IFNVGFQLSYIICFSFIFILQSYELTP--------------- 344
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA-GLIAI 134
++ +A L HF+ + GL+ N+L IP+ SF++ P I +
Sbjct: 345 ------IKLFLLTNFISQVAALPILFYHFNIVYFIGLLTNLLFIPLFSFIIFPLCTFILL 398
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
LM+ + V+ ++ I H + + + I++ + +F
Sbjct: 399 CLMLFNFTPEILDVITHYAFLLHDICVEIFLSLHALPLVIKSQHIIYYVIMIGVIYYLFH 458
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFS 253
+ + +I + +I++ + +L +G+ + +++ N + F F+
Sbjct: 459 QKPRIQVIAICLCSVLILIGRIQNEDALHVLDVGQGDCI-VIEYNGRVVMVDTGGKFDFN 517
Query: 254 Q-WKSA 258
+ W+
Sbjct: 518 EGWEKR 523
>gi|34541245|ref|NP_905724.1| ComEC/Rec2-like protein [Porphyromonas gingivalis W83]
gi|34397561|gb|AAQ66623.1| ComEC/Rec2-related protein [Porphyromonas gingivalis W83]
Length = 511
Score = 53.3 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 20/187 (10%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
I + P +D F Y +++I F+ + + +
Sbjct: 339 AAAASITLVIDPL-----SFYDVGFVLSYAAVASILIFFRPLASLLPDVRQPLLRLCRDA 393
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + A +F + + L N+ + +L +IP LI +
Sbjct: 394 MV-----------LCLAAQAFTLPLAAHYFGHVGIIFLWVNL-PLTLLVVFLIPLSLIYM 441
Query: 135 LLMILSLD-NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV-- 191
+L + L + V+ D + + + P S V ++ LL V
Sbjct: 442 VLAAVGLPLMLLSRVVGICADGVERLVTAAAAVSPSMEYAWQPSMSVVLCIMAVLLAVGI 501
Query: 192 FCKTNIR 198
+ N R
Sbjct: 502 LWRANRR 508
>gi|282600814|ref|ZP_05979787.2| DNA internalization competence protein, ComEC/Rec2 family
[Subdoligranulum variabile DSM 15176]
gi|282571019|gb|EFB76554.1| DNA internalization competence protein, ComEC/Rec2 family
[Subdoligranulum variabile DSM 15176]
Length = 693
Score = 53.3 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 92/293 (31%), Gaps = 15/293 (5%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP-KMIYSSESHN 66
+ P T+ A + P D F + + + ++ + I
Sbjct: 291 WQPVDLLTSTGVAAVILGLQNAYAP--CDMGFQLSFCAVLGVQAAGALFNREIEVLPVLT 348
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+I + L ++ + S + L+ H GL+ N+L + +L +
Sbjct: 349 GKFTARIYDLGLWVLESVQTAL--LASLATLPILVVHGLTASGVGLLTNLLVVWMLQPAL 406
Query: 127 IPAGLIAILLMILSLD---NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+ + IL + L ++ +++ L +I + + + T FV
Sbjct: 407 LLGVFLLILAALPLLAPVMHMVSLLLSLWLHAMIAVVAWCASLPAAYIDLPARYTLFVFA 466
Query: 184 VVEFLLMVFC---KTNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDK 237
V+ L + F + + + +IL + + S +V + +
Sbjct: 467 VLGLLALAFWYMHRLTWYSAAAAACAVFAVILGILAQKDVVQIALVGASNNSCVVCIQNG 526
Query: 238 NTLISNYSNPPSF-IFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSM 289
++ + Q+ + P A +++ E + S + I
Sbjct: 527 EGVVLFRGGQSNLNAVEQFLAEHAQPNITALVDLRQEPSELDFSDIPVISAEG 579
>gi|288555666|ref|YP_003427601.1| late competence protein ComEC [Bacillus pseudofirmus OF4]
gi|288546826|gb|ADC50709.1| late competence protein ComEC [Bacillus pseudofirmus OF4]
Length = 775
Score = 52.9 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 81/272 (29%), Gaps = 38/272 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + P + + P LF F + +++ S P +I
Sbjct: 298 LRFKQTVPPLIPIAAVFLLYLAIKPFA-----LFQLGFQLSF--LTSFVLILSAPIIINR 350
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ A + T ++ ++ HF+ + L+ N++ IP
Sbjct: 351 YSHNIAR----------------LAAVTTLAQLASLPLILLHFYQASLLSLLLNLIYIPF 394
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+SF+V+P + +L + NI + + I + +
Sbjct: 395 ISFIVLPLAFLGVLCSSILPSNINIAFLLLEIT-IPPVHEWLVRLDGLSLFMVRTGKPNA 453
Query: 182 TIVVEFLLM-----VFC-KTNIRHIGSIMIGITIIILFTFPYSF-----SPDLLISEKGN 230
+ +L+ + ++ G+ I++ + F +L +G+
Sbjct: 454 VALFGSILLFTASILLWEAGKRGWWKLLICGLLWIVISQWAGPFLKKEAVVTMLDVGQGD 513
Query: 231 LVAL---VDKNTLISNYSNPPSFIFSQWKSAL 259
+ + + + F +W+
Sbjct: 514 SFIIELPRRREVYVIDAGGTLHFANEKWRERN 545
>gi|290968853|ref|ZP_06560390.1| ComEC/Rec2-like protein [Megasphaera genomosp. type_1 str. 28L]
gi|290781149|gb|EFD93740.1| ComEC/Rec2-like protein [Megasphaera genomosp. type_1 str. 28L]
Length = 706
Score = 52.9 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 49/330 (14%), Positives = 100/330 (30%), Gaps = 34/330 (10%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
I G+ +P +FD +F + I +YS + I +
Sbjct: 326 ALGIAIAGMLLYNPFM------VFDLSFRLSCGASAGILLWYSKFQFI---------LQR 370
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
S +++S + ++ F +PVY IAN+L P+L V++
Sbjct: 371 FPSFLRESLA------LCASAQILVMPLVLASFQALPVYSFIANLLVAPVLDLVILLGLG 424
Query: 132 IAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
I I L +I + W L I ++ +
Sbjct: 425 SVITGSIWTPLGDIFLYPLQWLLTWAIQGNACLAAFPYSRYWHGALSVTTAAAWYIAAGA 484
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI----SEKGNLVALVDKNTLISNYSN 246
VF K +I + + + + + P + + + + V V + + + N
Sbjct: 485 VFLKKRQGYIAAGLSSVVWVSGQMVAWLTVPAITVYSFDFGRDSAVCAVTADNRVRLWYN 544
Query: 247 PPSFIFSQWKSALITPFHEAPHVQKEDL-------QEKNQSSLKEILRSMQPRKFLCIKK 299
+F + S + P + + D + L L + + R+
Sbjct: 545 KENFSSREDISYTVIPALQYEGIFALDACTVSGKDTKNTARQLAPYLTAGKVRQCFGRPP 604
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRL-SCQLS 328
V R + +++D +C
Sbjct: 605 GCTVFSGRQPYYLSWGRKEDRFPAGACVEV 634
>gi|300983101|ref|ZP_07176445.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 200-1]
gi|300307005|gb|EFJ61525.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 200-1]
Length = 405
Score = 52.9 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNI 144
+ + I FH I + IAN+ AIP+++F+ +P L A+++ L+
Sbjct: 15 LQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQG 74
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + L ++ + + + L+V + N R + ++
Sbjct: 75 LWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTFSP--WFLLVVWRLNAWRTLPAM 129
Query: 204 MIGITIIILFTFPYSFSPD 222
+ + +++ PD
Sbjct: 130 CVAVGLLMCLPLWQKPRPD 148
>gi|255656458|ref|ZP_05401867.1| putative competence membrane protein [Clostridium difficile
QCD-23m63]
gi|296450096|ref|ZP_06891858.1| probable competence membrane protein [Clostridium difficile NAP08]
gi|296878477|ref|ZP_06902483.1| probable competence membrane protein [Clostridium difficile NAP07]
gi|296261104|gb|EFH07937.1| probable competence membrane protein [Clostridium difficile NAP08]
gi|296430561|gb|EFH16402.1| probable competence membrane protein [Clostridium difficile NAP07]
Length = 433
Score = 52.9 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 63/186 (33%), Gaps = 33/186 (17%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +K D A + I GI + ++ +F + +I FY+
Sbjct: 241 IFIDRKKDGISALSLI-GIILIMNNPYVI----YNVSFQLSFLATLSILIFYNK------ 289
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + ++ + + F IP+ +I N++ +P
Sbjct: 290 ---------------INSIIKLSMVSLTISSNILTLPIIYYTFKGIPLLSIIGNLIIVPF 334
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LDIIIHIAHRISVAHNEFCIGRIPE 177
+ ++ L L++ + + ++++ ++ I + +IS + P+
Sbjct: 335 VGVIIY---LSIASLIVFKVSVVIAKIISFFNSTLIESIFFLLEKISNLSFAYINIEKPK 391
Query: 178 TSFVTI 183
V I
Sbjct: 392 FYIVII 397
>gi|324009866|gb|EGB79085.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 57-2]
Length = 406
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNI 144
+ + I FH I + IAN+ AIP+++F+ +P L A+++ L+
Sbjct: 16 LQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQG 75
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + L ++ + + + L+V + N R + ++
Sbjct: 76 LWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTFSP--WFLLVVWRLNAWRTLPAM 130
Query: 204 MIGITIIILFTFPYSFSPD 222
+ + +++ PD
Sbjct: 131 CVAVGLLMCLPLWQKPRPD 149
>gi|315296230|gb|EFU55537.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 16-3]
Length = 408
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNI 144
+ + I FH I + IAN+ AIP+++F+ +P L A+++ L+
Sbjct: 18 LQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQG 77
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + L ++ + + + L+V + N R + ++
Sbjct: 78 LWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTFSP--WFLLVVWRLNAWRTLPAM 132
Query: 204 MIGITIIILFTFPYSFSPD 222
+ + +++ PD
Sbjct: 133 CVAVGLLMCLPLWQKPRPD 151
>gi|310829061|ref|YP_003961418.1| DNA internalization-related competence protein ComEC/Rec2
[Eubacterium limosum KIST612]
gi|308740795|gb|ADO38455.1| DNA internalization-related competence protein ComEC/Rec2
[Eubacterium limosum KIST612]
Length = 771
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 32/136 (23%)
Query: 14 ETTIEGIA-RLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ GI L P+ LF F + + AI FY ++
Sbjct: 312 GLCMAGIVILLFQPAQ-----LFMAGFQLSFSAVLAIVLFY------------RPLLYEY 354
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN--------------ILA 118
IK + + + HFH + + LI+N ++
Sbjct: 355 GRHIKAPGAMVSSLLLTFCATLGTMPASLYHFHTLNLVALISNLLVVPLVGVLLVFALIT 414
Query: 119 IPILSFVVIPAGLIAI 134
+P+ +F+ GL +
Sbjct: 415 VPLTAFIPAAGGLFCL 430
>gi|315291211|gb|EFU50571.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 153-1]
Length = 408
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNI 144
+ + I FH I + IAN+ AIP+++F+ +P L A+++ L+
Sbjct: 18 LQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQG 77
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + L ++ + + + L+V + N R + ++
Sbjct: 78 LWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTFSP--WFLLVVWRLNAWRTLPAM 132
Query: 204 MIGITIIILFTFPYSFSPD 222
+ + +++ PD
Sbjct: 133 CVAVGLLMCLPLWQKPRPD 151
>gi|241896586|ref|ZP_04783882.1| competence protein EC [Weissella paramesenteroides ATCC 33313]
gi|241870178|gb|EER73929.1| competence protein EC [Weissella paramesenteroides ATCC 33313]
Length = 749
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 62/169 (36%), Gaps = 5/169 (2%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G++ IG P ++++ ++ Q +++ + ++ +
Sbjct: 313 GLALIGGLIIEPGVLHNFGGQLSYLLTFGLLWLQDRPAWLQSIWLSTFILPTLLWHTLSW 372
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
H L+AN+L +PI +++IP + I I + + W ++++ +
Sbjct: 373 H---PISLLANLLIVPIFVWLIIPVIIFGIFATICHFAWL-QDICEWIINLMQLCIKFGA 428
Query: 165 VAHNEFCIGRIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIIL 212
E GR + + + + ++ CK + + + + +
Sbjct: 429 KIPGECLFGRPSIIFCIVLTILPLIWLITCKKRLLFLILVCCYAILWGM 477
>gi|166368608|ref|YP_001660881.1| competence protein [Microcystis aeruginosa NIES-843]
gi|166090981|dbj|BAG05689.1| competence protein [Microcystis aeruginosa NIES-843]
Length = 719
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 59/169 (34%), Gaps = 20/169 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + + K KI I I +
Sbjct: 351 IWDLGFQLSFLATLGLIITVPLLK-------------NKIDYFPNLIAEPI--AISLAAT 395
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
L+ F+ I +Y + NI+ P+++ + + A L +I L +I ++ +
Sbjct: 396 LWTMPLLMFTFNSIALYNIPINIITTPLVTLISLGGVFTAFLGLIYPPLGSISASILYYP 455
Query: 153 LDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMV--FC-KTNI 197
L++++ I S+ + + G++ + I + L+ +
Sbjct: 456 LELLLQITTFFSLLPFSTYSTGKLSLGVMLIIYICLTLICFNIWFRQRW 504
>gi|126653875|ref|ZP_01725722.1| late competence protein ComEC [Bacillus sp. B14905]
gi|126589600|gb|EAZ83739.1| late competence protein ComEC [Bacillus sp. B14905]
Length = 445
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 65/193 (33%), Gaps = 22/193 (11%)
Query: 29 PAFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
PG +F F Y +++ Y + S
Sbjct: 265 LLEPGVIFQIGFQLSYLAAASLVY-------------------SSFIFTQTSNWISRSFF 305
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIP 145
+ L+ HF+ + + NI+ +P+ SFV++P ++A++L + L L N+
Sbjct: 306 VTFVCQLLVYPLLLHHFYELSISSFFVNIIFVPLFSFVILPFNMVALVLTYISLPLANLL 365
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
F + + ++ I + P + + +L F + G ++
Sbjct: 366 FACYEPLRNGLTNVIFSIQALPFQLWSPGKPSIWLCCLAMLSVLACFYFLETKRFGHAIV 425
Query: 206 GITIIILFTFPYS 218
+ I ++ Y
Sbjct: 426 VLVIPAIWIHVYP 438
>gi|50085709|ref|YP_047219.1| competence factor involved in DNA uptake [Acinetobacter sp. ADP1]
gi|11345439|gb|AAG34710.1|AF320001_3 competence factor ComA [Acinetobacter sp. BD413]
gi|49531685|emb|CAG69397.1| competence factor involved in DNA uptake [Acinetobacter sp. ADP1]
Length = 792
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/213 (13%), Positives = 72/213 (33%), Gaps = 11/213 (5%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F Y + Y + + + + + + +
Sbjct: 358 AFWLSYGACFILIRIYQ--------DMTQAQQFHQTRFTRGMQILKALVRSQWKIFVALM 409
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F I ++N++AIPIL +++P ++A L + SL N+ F + L++
Sbjct: 410 PLTLIIFKQISWIAPLSNLIAIPILGGIIVPLDIMAGCLWLFIPSLGNLLFYLNNSLLEL 469
Query: 156 IIHIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
I I + + + + + + +++ K + S++ + ++I
Sbjct: 470 FIGILKGLDHLFNPQLQYYAFTPLLLICLTLAIVILFLPKGVVPKFWSVLCFVPLLIPSK 529
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+L +G + + D+ I +
Sbjct: 530 MIRPTQISILDVGQGQSIFIQDQTQRILLDTGG 562
>gi|121607402|ref|YP_995209.1| DNA internalization-like competence protein ComEC/Rec2
[Verminephrobacter eiseniae EF01-2]
gi|121552042|gb|ABM56191.1| DNA internalization-related competence protein ComEC/Rec2
[Verminephrobacter eiseniae EF01-2]
Length = 878
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 76/252 (30%), Gaps = 30/252 (11%)
Query: 2 LSITKKYDPFPAETTIE-GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
L ++ + P+P + L+ P A F + + +
Sbjct: 379 LQLSGRRWPWPQVWLLACAAVVLADPWALA-----QAGFWLSFVAVGVLFA-----TNPT 428
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+S+ + ++ + A F + + G AN++AIP
Sbjct: 429 VDDSYRLGAMGRFHALLREQWVVTLALTPLTLLL---------FAQLTLVGFAANLVAIP 479
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++ VV P L +L L + + A L +I + ++
Sbjct: 480 WVTLVVTPLALAGLLWAPL------WSLAALALQPLIALLQWLAQWPWAQLFLPAAPLWA 533
Query: 181 VTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALVD 236
V ++ + R ++ + P +LL ++ +GN V +
Sbjct: 534 GGAAVAGGALLALRMPWQLRLPALALLVPVLWWQPQRPAPGQFELLAADIGQGNAVLVRT 593
Query: 237 KNTLISNYSNPP 248
N + + P
Sbjct: 594 ANHTLLYDAGPR 605
Score = 39.8 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 38/236 (16%), Positives = 78/236 (33%), Gaps = 16/236 (6%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + A RL P G P FD+ + +G+ A GY + PK
Sbjct: 177 LRGRPPVVRAGERWALTVRLKAPHGMRNPHGFDYELWLWEQGVQATGYVRTGPKDAPPLR 236
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL-----A 118
TW + +QS + I +G S+ F + G++A ++ A
Sbjct: 237 LGATWR-HPVERWRQSVRDAIVERLGRGAQDSSEPF------RARIAGVVAALVTGDQRA 289
Query: 119 IPILSFVVIPAGLIAILLMILSLD-NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
I + + A +A L+ I L + + A + + R +
Sbjct: 290 IERADWELFRATGVAHLMSISGLHITLFAWLAALAVRTLW---RRSTGLCLAVPAPSAAL 346
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ V + + L + ++ + + L + + L++ ++A
Sbjct: 347 VAGVLLAAGYALFSGWGVPAQRTVIMLGSVACLQLSGRRWPWPQVWLLACAAVVLA 402
>gi|313813081|gb|EFS50795.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL025PA1]
Length = 762
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/220 (10%), Positives = 57/220 (25%), Gaps = 25/220 (11%)
Query: 40 SSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIF 99
+ I ++ + W ++ + + +
Sbjct: 332 WLSVCATAGILWWAQPWSV------AMEWAPAWLA---------VGVTVPWAARVTTQPV 376
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIH 158
+ + GL+AN+ A P + + +L I L + W + II
Sbjct: 377 ITWMAGTVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGTPFGRLAGWCVQPIIW 436
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIGITI 209
IAH + A + + + + + T + + I +
Sbjct: 437 IAHFGAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVR 496
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
L +P + + +G+ + P
Sbjct: 497 PPLPGWPGQWQVAICDVGQGSAALVRAGPHEAVVVDTGPD 536
>gi|301597092|ref|ZP_07242100.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB059]
Length = 522
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 58/195 (29%), Gaps = 18/195 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + PF + L P G F Y + Y +
Sbjct: 342 LLLKQPIKPFTLLVYSASLLLLMDPFSVLSAG-----FWLSYGACFILIRIYQTIAQLPE 396
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + K F++++ + S + F I + NI+A+PI
Sbjct: 397 QHFLSLSS-------KMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPI 449
Query: 122 LSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ V++P ++A N+ F L I++ + +
Sbjct: 450 VGSVIVPLNIMAACAWFVIKPFG--NMLFHFNDMLLSILLSYLGLLEKLSLTLQGISLTP 507
Query: 178 TSFVTIVVEFLLMVF 192
S + I +++
Sbjct: 508 LSLLAISCAIIILFL 522
>gi|157693058|ref|YP_001487520.1| competence protein EC [Bacillus pumilus SAFR-032]
gi|157681816|gb|ABV62960.1| competence protein EC [Bacillus pumilus SAFR-032]
Length = 775
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 29/192 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ P + + L+ P + LFD F + + +++ ++S
Sbjct: 299 KEMKQPSAVVLSATFLFLLAI--HPLY--LFDIGFQLSFV---VTLFILLSTRILSQAKS 351
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
I ++ L+ HF + + N++ +P +
Sbjct: 352 ----------------AVMQLFLISFIAQLASLPVLLYHFQQFSLLSIPLNMIFVPFYTT 395
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISV----AHNEFCIGRIPETSF 180
VV+P L+ LL I+ L ++ LD +I ++H++S I
Sbjct: 396 VVLPLSLLFFLLSIIYL--PLGQMLFQLLDSVIQLSHQLSAHMAVFDGFNLIFMKSTWWH 453
Query: 181 VTIVVEFLLMVF 192
+ + V ++ +
Sbjct: 454 ILLEVSTIVFLL 465
>gi|324012940|gb|EGB82159.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 60-1]
Length = 411
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNI 144
+ + I FH I + IAN+ AIP+++F+ +P L A+++ L+
Sbjct: 21 LQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQG 80
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + L ++ + + + L+V + N R + ++
Sbjct: 81 LWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTFSP--WFLLVVWRLNAWRTLPAM 135
Query: 204 MIGITIIILFTFPYSFSPD 222
+ + +++ PD
Sbjct: 136 CVAVGLLMCLPLWQKPRPD 154
>gi|290510656|ref|ZP_06550026.1| DNA internalization competence protein ComEC/Rec2 [Klebsiella sp.
1_1_55]
gi|289777372|gb|EFD85370.1| DNA internalization competence protein ComEC/Rec2 [Klebsiella sp.
1_1_55]
Length = 754
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/321 (11%), Positives = 103/321 (32%), Gaps = 35/321 (10%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ + G ++ P L ++ + +++ +
Sbjct: 300 RWTAWQVWLCCLGAILVTDPLAVLSQSL-----WLSAFAVAGLIFWFQWVPLPA---GRW 351
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W WK + ++ + + + FH + + + AN+LA+P+++ +
Sbjct: 352 RWPWKALFALVH---------LQAGVTLLLMPLQLLLFHGVSLTSMAANLLAVPLVTLLA 402
Query: 127 IPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+P L A+LL + ++++ + L ++ R + + +
Sbjct: 403 VPLILGAMLLHLTGPGMVESLLWLAADRVLALLFWALRR---LPDGWL--PLDARWLWIS 457
Query: 184 VVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKN 238
+ +LL++ + + RH ++ + + +++ F F D ++ L +++++
Sbjct: 458 SLPWLLVMGWRFQSWRHFPALCLSVLFLLMRPFWRPFPADEWRVTMLDVGQGLAMVIERH 517
Query: 239 TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIK 298
Y P+ W P ++ LQ + E L +
Sbjct: 518 GKALLYDTGPA-----WPQGDSGQQVIIPWLRWHHLQLQGIVLSHEHLDHRGGLNSVLQA 572
Query: 299 KSFCVGCHRSDVIVGVLKRKD 319
+ +
Sbjct: 573 WPQAWVRSPLGWARHLPCHRG 593
>gi|262039467|ref|ZP_06012771.1| DNA internalization-related competence protein ComEC/Rec2
[Leptotrichia goodfellowii F0264]
gi|261746534|gb|EEY34069.1| DNA internalization-related competence protein ComEC/Rec2
[Leptotrichia goodfellowii F0264]
Length = 428
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 29 PAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
P LFD + Y + AI + Y I + + + + + +
Sbjct: 253 VLNPYSLFDISLQLSYAAVIAIIFIYPIFEKLLQGKYFDEMKDGIVKDV------LKLTL 306
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+ ++ + +F +P++ + N + +P+ V+I LL IL
Sbjct: 307 LSLVIQMTSIPLFLYYFDKLPLFSFLLNTVGVPV-GTVLIELLFGVTLLNIL 357
>gi|315126709|ref|YP_004068712.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoalteromonas sp. SM9913]
gi|315015224|gb|ADT68562.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoalteromonas sp. SM9913]
Length = 755
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 20/119 (16%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + I P PGL+ F+F ++ F + + S
Sbjct: 325 WRSILYALVIILAVNPFSLLNPGLY-FSF------LAVCIIFMVLKQFPLRGHSLLAN-- 375
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
I + F+ + + GL+ N++AIPILSFV++PA
Sbjct: 376 -----------IRTLFIIQLGLFIGLLPLSLYFFNGVSLAGLVLNLVAIPILSFVLMPA 423
>gi|300978428|ref|ZP_07174276.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 45-1]
gi|300409670|gb|EFJ93208.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 45-1]
Length = 406
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNI 144
+ + I FH I + IAN+ AIP+++F+ +P L A+++ L+
Sbjct: 16 LQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQG 75
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + L ++ + + + L+V + N R + ++
Sbjct: 76 LWFLADRSLALLFW---GLKSLPEGWINIAERWQWLTFSP--WFLLVVWRLNAWRTLPAM 130
Query: 204 MIGITIIILFTFPYSFSPD 222
+ + +++ PD
Sbjct: 131 CVAVGLLMCLPLWQKPRPD 149
>gi|291550849|emb|CBL27111.1| DNA internalization-related competence protein ComEC/Rec2
[Ruminococcus torques L2-14]
Length = 765
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 53/163 (32%), Gaps = 22/163 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L D F + I I Y + W KIS L I
Sbjct: 312 LLDAAFLLSFGAILGILLLYP---IFEQKTRLKAWEGFKISLAVNGMLLGI--------- 359
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAW 151
++ ++ +P Y L+ N++ IP+ F V+ G+ IL LS + I F
Sbjct: 360 ------MLYYYFEVPPYALVLNVILIPLFPF-VMLTGIGGILFSELSGTVGKIGFRSCDC 412
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE-FLLMVFC 193
L + S + PE +V I L + F
Sbjct: 413 LLSFYDKLCELTSALPGSRIVTGQPELWWVLIYYGVLLFLCFL 455
>gi|260549327|ref|ZP_05823547.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter sp.
RUH2624]
gi|260407733|gb|EEX01206.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter sp.
RUH2624]
Length = 810
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 43/145 (29%), Gaps = 20/145 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + + PF + L P G F Y + Y I
Sbjct: 342 IVLKQPLKPFALLVYSASLLLLMDPFSVLSAG-----FWLSYGACFILLRIYQTIVQIPD 396
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSA--SASIFLIKHFHCIPVYGLIANILAI 119
+ S++ + I + G + S + F I + NI+A+
Sbjct: 397 ---------QHFLSLRSKMNFMTKVLIESQGKIFIALSPLTLLFFQQISWIAPLTNIVAV 447
Query: 120 PILSFVVIPAGLIAILLM----ILS 140
PI+ +++P ++A
Sbjct: 448 PIVGGIIVPLNILAACTWFIVKPFG 472
>gi|154686817|ref|YP_001421978.1| hypothetical protein RBAM_023870 [Bacillus amyloliquefaciens FZB42]
gi|154352668|gb|ABS74747.1| ComEC [Bacillus amyloliquefaciens FZB42]
Length = 783
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 67/237 (28%), Gaps = 31/237 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+ F + S + I A
Sbjct: 323 LWQAGFQLSFA------------------VSASLILSSSILKKAGKSRLAGLAMASFIAE 364
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAW 151
S+ FL+ HF I + N++ +P + VIP +I LL++LS + FG+
Sbjct: 365 LSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPVSVIGFLLLLLSRQMGECLFGMFDL 424
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPET---------SFVTIVVE--FLLMVFCKTNIRHI 200
+ + + I P+ F + K+ +
Sbjct: 425 VMKPVHDFITYAASVDLFTMIVSKPDFLSLLLLAVSVFTLFAALEKGGFLKLRKSALFFC 484
Query: 201 GSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
+ I + + D+ + + A K T++ + ++ WK
Sbjct: 485 AVLAYLICRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYPGESWKE 541
>gi|332295719|ref|YP_004437642.1| ComEC/Rec2-related protein [Thermodesulfobium narugense DSM 14796]
gi|332178822|gb|AEE14511.1| ComEC/Rec2-related protein [Thermodesulfobium narugense DSM 14796]
Length = 543
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 54/179 (30%), Gaps = 30/179 (16%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
Y F + + + P LFD +F + I A+ + I K +
Sbjct: 273 NYSSFNLTLLVMILFLIFDPY-----SLFDISFQLTFLCIFAMFFTGEIRKKFNFNNYLF 327
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ ++ +F+ + V L N+ P L +
Sbjct: 328 ELFL-----------------LSFSVFIFLFPVIVNYFNNVSVLSLFTNVFITPFLEIFL 370
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGL----DIIIHIAHRISVAH-NEFCIGRIPETSF 180
+ +++ + + I + + D++I+I S + +IP S
Sbjct: 371 LIGFVLSFFMA---VSGIFTQYIGHFITYITDLVIYIVKGWSNFPLSSVLFAKIPLFSV 426
>gi|297626066|ref|YP_003687829.1| ComE operon protein 3 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921831|emb|CBL56391.1| ComE operon protein 3 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 773
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 60/186 (32%), Gaps = 17/186 (9%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F+ + I ++ + W ++ + +
Sbjct: 335 GFALSATATAGILWWAGPWQ-----ARMRRWAPGWLAE---------SLCVPAAAQLATQ 380
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDII 156
+ I V GL AN+ A P + V + + A++ +L L + + + I
Sbjct: 381 PLITILSGEISVVGLGANMAAAPFVGPVTVLGLVAALISPVLGPLAQVMGWLAGCCVQPI 440
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFT 214
I IAH + A + S +++ L++ + R +G + + ++I
Sbjct: 441 ILIAHLAASAPMATMTWPVSPGSITLLIIFCLMIALILGRLVGRRLGCLALAGVMVIACL 500
Query: 215 FPYSFS 220
+
Sbjct: 501 WRPPLP 506
>gi|323442792|gb|EGB00417.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus O46]
Length = 726
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P SF+
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSFI 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 419
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 420 IFIISVYYIFWLLAKR 435
>gi|255101636|ref|ZP_05330613.1| putative competence membrane protein [Clostridium difficile
QCD-63q42]
gi|255307505|ref|ZP_05351676.1| putative competence membrane protein [Clostridium difficile ATCC
43255]
Length = 417
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 63/186 (33%), Gaps = 33/186 (17%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +K D A + I GI + ++ +F + +I FY+
Sbjct: 225 IFIDRKKDGISALSLI-GIILIMNNPYVI----YNVSFQLSFLATLSILIFYNK------ 273
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + ++ + + F IP+ +I N++ +P
Sbjct: 274 ---------------INSIIKLSMVSLTISSNILTLPIIYYTFKGIPLLSIIGNLIIVPF 318
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LDIIIHIAHRISVAHNEFCIGRIPE 177
+ ++ L L++ + + ++++ ++ I + +IS + P+
Sbjct: 319 VGVIMY---LSIASLIVFKVSVVIAKIISFFNSTLIESIFFLLEKISNLSFAYINIENPK 375
Query: 178 TSFVTI 183
V I
Sbjct: 376 FYIVVI 381
>gi|126700092|ref|YP_001088989.1| putative competence membrane protein [Clostridium difficile 630]
gi|115251529|emb|CAJ69362.1| putative membrane protein [Clostridium difficile]
Length = 431
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 63/186 (33%), Gaps = 33/186 (17%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +K D A + I GI + ++ +F + +I FY+
Sbjct: 239 IFIDRKKDGISALSLI-GIILIMNNPYVI----YNVSFQLSFLATLSILIFYNK------ 287
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + ++ + + F IP+ +I N++ +P
Sbjct: 288 ---------------INSIIKLSMVSLTISSNILTLPIIYYTFKGIPLLSIIGNLIIVPF 332
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LDIIIHIAHRISVAHNEFCIGRIPE 177
+ ++ L L++ + + ++++ ++ I + +IS + P+
Sbjct: 333 VGVIMY---LSIASLIVFKVSVVIAKIISFFNSTLIESIFFLLEKISNLSFAYINIENPK 389
Query: 178 TSFVTI 183
V I
Sbjct: 390 FYIVVI 395
>gi|302335766|ref|YP_003800973.1| DNA internalization-related competence protein ComEC/Rec2
[Olsenella uli DSM 7084]
gi|301319606|gb|ADK68093.1| DNA internalization-related competence protein ComEC/Rec2
[Olsenella uli DSM 7084]
Length = 798
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/268 (10%), Positives = 77/268 (28%), Gaps = 20/268 (7%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF-----YSIPKM 58
+ ++ + L P F + + F Y++ +
Sbjct: 318 VGRRNHSLSCACVVAASMVLVDPFAAG-----QLGFLLSVSSVVGLCLFSPYAAYALRAL 372
Query: 59 IYSSESHNTWTWKKISSIKQSF-LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
+ W ++ ++F + F + +AN++
Sbjct: 373 LPRRPQSVPWRLPCGRALSRAFDAFADITAATLVAQVVTLPIVGPAFGSFALVSTVANLV 432
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
P+ ++ AGL+A + + + V + R+S +P
Sbjct: 433 LGPLFELLIT-AGLLACVAPLAPVRVGALLVCDGSGSLAADAVRRMSRIPLASLRVDVPG 491
Query: 178 TSFVTIVVEFLLMVFCKT--------NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
+VV ++ + I G+ + +++ + S +L +G
Sbjct: 492 WVLWLVVVTASALLVWRWPKVNPRKVRIALGGAAAVLSVLLVRWALFAPPSVRILDVGQG 551
Query: 230 NLVALVDKNTLISNYSNPPSFIFSQWKS 257
+ + + D + + S P + +
Sbjct: 552 DAILVQDGPSAVLVDSGPDERVADELAR 579
>gi|282916858|ref|ZP_06324616.1| competence protein ComEC [Staphylococcus aureus subsp. aureus D139]
gi|282319345|gb|EFB49697.1| competence protein ComEC [Staphylococcus aureus subsp. aureus D139]
Length = 605
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 61/193 (31%), Gaps = 8/193 (4%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVEFLLMVFCK 194
V ++ +
Sbjct: 427 ISVYYIFWLLAKR 439
>gi|220934541|ref|YP_002513440.1| DNA internalization-related competence protein ComEC/Rec2
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995851|gb|ACL72453.1| DNA internalization-related competence protein ComEC/Rec2
[Thioalkalivibrio sp. HL-EbGR7]
Length = 770
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 66/210 (31%), Gaps = 26/210 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + P+ + L P G F + ++ I + +
Sbjct: 321 LGRTGQPWRVLSLALIAVLLWDPGAVLGAG-----FWLSFGAVAVILLSLTGRLRPPTGW 375
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
A I + + L+ F V +AN+LA+P +
Sbjct: 376 -------------------RAAARIQVLVALGLTPLLLVFFSQTSVVAPLANLLAVPWVG 416
Query: 124 FVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFV 181
+V+P L++ L +L L +P +A GL +I I ++ P +
Sbjct: 417 LLVVPLTLLSAALTLLHPLAGLPVAWLADGLMGLIWIWLEFLAGLPFARWHASRPAWALA 476
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+ L + + + ++ + ++
Sbjct: 477 LAALGIALWLLPRGLPGRALAPVLCLPLLW 506
>gi|259908917|ref|YP_002649273.1| Putative competence-related protein [Erwinia pyrifoliae Ep1/96]
gi|224964539|emb|CAX56049.1| Putative competence-related protein [Erwinia pyrifoliae Ep1/96]
gi|283478913|emb|CAY74829.1| Recombination protein 2 [Erwinia pyrifoliae DSM 12163]
Length = 754
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 67/238 (28%), Gaps = 31/238 (13%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
++ + +Y + W ++ ++ L + F
Sbjct: 336 AVAGLLLWYHSFPLPARFCQRWRWFLLRLLHLQAGMLLLM------------MPLQAVLF 383
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR-I 163
H I + L+AN+ A+P++S V +P L+A++ L + +D + + +
Sbjct: 384 HGISLSALVANLWAVPLISLVTVPLILLALMCNALPWISPLLW---QCVDRSLALVFMPL 440
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
+ P ++ + + M I L +
Sbjct: 441 QSLPRGW----FPLDHALSAASLLCWLALICLRFGWWRTSMASIASTALLICSWRSLFPA 496
Query: 224 ------LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
++ L ++ + + Y W P + + ++
Sbjct: 497 AEWRVDMLDVGHGLAVVISRQGEATLYDTGHR-----WPGGDAAQSQILPWLAWQGIR 549
>gi|91225264|ref|ZP_01260432.1| Rec2-related protein [Vibrio alginolyticus 12G01]
gi|91189903|gb|EAS76175.1| Rec2-related protein [Vibrio alginolyticus 12G01]
Length = 751
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/294 (11%), Positives = 84/294 (28%), Gaps = 31/294 (10%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ + I L P + +F Y + A+ + ++ +
Sbjct: 306 WTSWRVLLLAVSIQLLVQPFA-----SYSMSFWLSYLSVCAVLFAINLIRHQRGGWKAR- 359
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ SA F + + N++ IP F+V+
Sbjct: 360 --------------LKALLLTQLMLSALIVPVSGHFFSGFSLSSIAYNLVFIPWFGFIVV 405
Query: 128 PAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
P +A+ + + + ++ W L + + + T V +V
Sbjct: 406 PLMFLALFSSLFLEMIAKPLWHLVDWSLQPLSTSIQYAV---GSWQSISMEMTMLVMAIV 462
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS 245
L+ ++ + I I+I + + + D+L G V + + ++ +
Sbjct: 463 VCLIFQRFMSHYAWYLLLGIVISIKLASKYEPRWRIDVLDVGHGLAVVVEKDDKVLLYDT 522
Query: 246 NPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
W+S I P + + + + L +F+
Sbjct: 523 G------KAWQSGSIAEQVVTPVLHQRGYESIDTLILSHSDNDHAGGRFVIEDA 570
>gi|262165991|ref|ZP_06033728.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio mimicus VM223]
gi|262025707|gb|EEY44375.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio mimicus VM223]
Length = 747
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 84/241 (34%), Gaps = 31/241 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y K+ + K L +I +
Sbjct: 331 SFWMSFLAVAIVLY-------------QLASQGKRKAWWKALLLAQISLV------CLMA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIPFGVMAWGLDI 155
F + + ++ N++ IP S V++PA + + L I + + + + W +
Sbjct: 372 PVTAYFFGGLSITAVLYNLVFIPWFSVVIVPALFLGLALTVTIPTWAALYWPRVDWTF-L 430
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ A + + I +V+ L + + + + ++I+ L+ +
Sbjct: 431 PLDWALQFADVGWVVIPQSIQGLIAALVVLSLLY------RVMSLRACALSLSIVGLWWW 484
Query: 216 PYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
S +P ++ L ++++N Y S+ + +I P + +++
Sbjct: 485 FPSITPLWRMDVLDVGHGLAIVIEQNDRAIIYDTGSSWSGGSYAQNVIEPILQQRGIRRL 544
Query: 273 D 273
D
Sbjct: 545 D 545
>gi|167911667|ref|ZP_02498758.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 112]
Length = 704
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 67/266 (25%), Gaps = 40/266 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 353 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 407
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 408 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFRRLARRVRDAARAQFAVTIALA 467
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 468 PLTALWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHALVQALM 526
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + A + P+ + + + + +
Sbjct: 527 RLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCAAPLAWLPLV 580
Query: 218 SFSPDLLISEKGNLVALVDKNTLISN 243
+ +P L AL
Sbjct: 581 APAPLAPPDGAFRLTALDVGQGSAVL 606
>gi|206900249|ref|YP_002250826.1| come operon protein 3, putative [Dictyoglomus thermophilum H-6-12]
gi|206739352|gb|ACI18410.1| come operon protein 3, putative [Dictyoglomus thermophilum H-6-12]
Length = 446
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 30/166 (18%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ ++ DP A + I + P LF+ +F Y + + Y PK
Sbjct: 278 FLLRREEDPLNAIFWVAFINLIISPLK-----LFNISFQLSYMAMLGLLY---KPKFPKF 329
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ W+ + + I +F + ++AN +IPI
Sbjct: 330 MSNYLQEIWE----------------SSFWLMLFLAPLNIYYFGGLKPISILANFFSIPI 373
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII-----IHIAHR 162
S ++ + +++ + I V+ +DI+ + ++H
Sbjct: 374 FSIILF-FSVFYLIVASFPISYIFEKVLTILMDILFQGLHLIVSHY 418
>gi|311114619|ref|YP_003985840.1| hypothetical protein HMPREF0421_20735 [Gardnerella vaginalis ATCC
14019]
gi|310946113|gb|ADP38817.1| conserved hypothetical protein [Gardnerella vaginalis ATCC 14019]
Length = 607
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 58/196 (29%), Gaps = 25/196 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L +++Y A + P +D++F+ I
Sbjct: 394 LMFSRQYQSASALSITVISVLFICPKYA-----WDYSFALSVCATFGIIV---------- 438
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ ++I +I I + +IAN++ P
Sbjct: 439 ----CGMSLRRIFLRYMPSSLASALSITLCAQCFTLPVQILMQPQVSFISVIANLIVAPF 494
Query: 122 LSFVVIPAGLIAILL--MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE---FCIGRIP 176
+ F I GL++++ S+ I + ++G +I+ + A + + G +
Sbjct: 495 VDFATI-FGLLSLICANWSYSISLIFATISSFGTNIMANCAWYLGDLQIGTIPWVNGSLG 553
Query: 177 ETSFVTIVVEFLLMVF 192
L+V
Sbjct: 554 AWLIAFAEFAIFLLVL 569
>gi|322514364|ref|ZP_08067413.1| recombination protein 2 [Actinobacillus ureae ATCC 25976]
gi|322119734|gb|EFX91776.1| recombination protein 2 [Actinobacillus ureae ATCC 25976]
Length = 764
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 52/154 (33%), Gaps = 13/154 (8%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y + I + + P +F + ++ +Y +
Sbjct: 297 LRRYYTAWQLWWRIVALLLVLDPLTILS-----DSFWLSVLAVLSLIIWYQYFPLAKLFP 351
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
W +K + + S ++ + S F I + + N L +P+ S
Sbjct: 352 FCKKW--QKFNRLWLSLVH-----LQLGIFLVFSPVQFFFFEGISPWAFLTNFLIVPLYS 404
Query: 124 FVVIPAGLIAILL-MILSLDNIPFGVMAWGLDII 156
+++P + ++L IL+ ++ L I+
Sbjct: 405 LLLVPLVIFSLLTNNILNSWAWADWLVQGSLKIL 438
>gi|157146398|ref|YP_001453717.1| hypothetical protein CKO_02157 [Citrobacter koseri ATCC BAA-895]
gi|157083603|gb|ABV13281.1| hypothetical protein CKO_02157 [Citrobacter koseri ATCC BAA-895]
Length = 754
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/220 (10%), Positives = 69/220 (31%), Gaps = 28/220 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + ++ P L ++A+ ++Y +
Sbjct: 299 RQWSGWEVWFCCLAAIVIADPIAVLSQSL-----WLSAFAVAALIFWYQWFPVP------ 347
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W + + ++ + I FH + V +AN+ A+P+++F+
Sbjct: 348 -AWALPRAGKVALDLVHL-----QLGITLLLLPVQIALFHGVSVTSFLANLFAVPLVTFI 401
Query: 126 VIPAGLIAI---LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L + L L ++ + + LD++ + +
Sbjct: 402 SVPLTLAGMIGHLTGPLMVEEGLWALADASLDVLF---RALKSLPEGWINIDYRWQYLSL 458
Query: 183 IVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTFPYSFSP 221
+ + +I + ++L ++P+ +P
Sbjct: 459 AP----WLTLMAWRLNAWRTYPVICLFGVLLLSWPFWRTP 494
>gi|113970758|ref|YP_734551.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. MR-4]
gi|113885442|gb|ABI39494.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. MR-4]
Length = 773
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 45/136 (33%), Gaps = 11/136 (8%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + I L P G F + ++ I Y + S+
Sbjct: 296 RRYSSAWDRLLFALFIVLLVDPLACLSAG-----FWLSFCALAIILY------TLESAPV 344
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ K ++ +I S + F + V+ L N+L +P S
Sbjct: 345 AQSIENKATFMVRARIRFAQFWSIQWRLSLVLGLVQAIFFGGLSVHSLWINMLVVPWFSL 404
Query: 125 VVIPAGLIAILLMILS 140
+VIP ++A+++ +
Sbjct: 405 IVIPLSMLALIIWWIG 420
>gi|323438553|gb|EGA96300.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus O11]
Length = 726
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 64/196 (32%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P SF+
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSFI 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + +I + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKINDWIFI 419
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 420 IFIISVYYIFWLLAKR 435
>gi|153835241|ref|ZP_01987908.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
harveyi HY01]
gi|148868279|gb|EDL67413.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
harveyi HY01]
Length = 752
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/248 (9%), Positives = 68/248 (27%), Gaps = 31/248 (12%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P+ I P F +F Y + +
Sbjct: 306 WSPWRVLLLAVSIQLFIEPFA-----SFTMSFWLSYL-------------SVVAVLLAVN 347
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
++ + + + I + F + + N++ IP F+V+
Sbjct: 348 VVQQRRGNWQTKLSS--LLKIQLVLTLLIVPISGAFFSGTSLVSIAYNLVFIPWFGFLVV 405
Query: 128 PAGLIAILLMI--LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
P +A+++ L + + + +D ++ ++
Sbjct: 406 PLMFLALIVTPIAFQLAGVLWQL----VDWVLLPLTW--SLQFAVGSWHFVSLPLTLTIL 459
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+ + + + + I + + F + + L L++K+ ++
Sbjct: 460 AVAICGLLRRFLNRGSLVTLVILVTGVALFYERTTNSWRVDVLDVGHGLAVLIEKHGKVA 519
Query: 243 NYSNPPSF 250
Y ++
Sbjct: 520 LYDTGKAW 527
>gi|229520339|ref|ZP_04409765.1| hypothetical protein VIF_000861 [Vibrio cholerae TM 11079-80]
gi|229342705|gb|EEO07697.1| hypothetical protein VIF_000861 [Vibrio cholerae TM 11079-80]
Length = 747
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/219 (10%), Positives = 67/219 (30%), Gaps = 33/219 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 331 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F + V ++ N++ IP S V++PA + +LLM++ W
Sbjct: 372 PLTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWP----- 423
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFL---LMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + V + + + ++ + + + +I L+
Sbjct: 424 WVDWTFLPLDWALRFADVGWWVVPSKVQGVVAASVAILLLYRFMNLKACSLLLGMIGLWW 483
Query: 215 FPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
+ S +P ++ L +++++ Y S+
Sbjct: 484 WFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 522
>gi|169338099|ref|ZP_02863210.1| ComE operon protein 3 [Clostridium botulinum C str. Eklund]
gi|169294269|gb|EDS76402.1| ComE operon protein 3 [Clostridium botulinum C str. Eklund]
Length = 375
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 40/134 (29%), Gaps = 20/134 (14%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ YD A + I P D F+ + I + + +
Sbjct: 183 CFYRTYDSLSAISLAAIIILFMKPYYVV-----DIGFNLSFLATLGIILYNKKIRRL--- 234
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + + + + + + I V+ ++ N+L +P+
Sbjct: 235 ----------LYKLPDKINESLSITLS--AQIFSMPYAMCTLKNISVFFILGNLLLVPLY 282
Query: 123 SFVVIPAGLIAILL 136
S V++ L +L
Sbjct: 283 SIVILLGNLAIAVL 296
>gi|254372134|ref|ZP_04987627.1| hypothetical protein FTCG_01276 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569865|gb|EDN35519.1| hypothetical protein FTCG_01276 [Francisella novicida GA99-3549]
Length = 671
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 49/145 (33%), Gaps = 26/145 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ + I L ++ + + + +
Sbjct: 262 RRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI-------------- 302
Query: 66 NTWTWKKISSIKQSFLNEI-RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++Q I TY + + +F V ++ANI+AIP++SF
Sbjct: 303 ------ISIVLQQYKSKLIKILLAQTYLAIFLVPISVYYFGGFSVVSILANIVAIPLVSF 356
Query: 125 VVIPAGLIAILLMILSLDNIPFGVM 149
V++P L+ +LL + ++ +M
Sbjct: 357 VIVPLLLLCLLLSFIGINLWLLPMM 381
>gi|326800333|ref|YP_004318152.1| ComEC/Rec2-related protein [Sphingobacterium sp. 21]
gi|326551097|gb|ADZ79482.1| ComEC/Rec2-related protein [Sphingobacterium sp. 21]
Length = 702
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 45/145 (31%), Gaps = 16/145 (11%)
Query: 29 PAFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
PG L D F Y + I + + + + +
Sbjct: 355 LYNPGFLRDVGFQLSYLAVLGIIWLMPLLSELVRFKYELAN------------KGWSYVS 402
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + ++ +FH PVY L AN+ +S ++ L+ L++ L+
Sbjct: 403 MSCAAQLANFPLVLYYFHLFPVYFLPANLFITLPVSLIIYAGFLL--LMLPLNKFTYGMA 460
Query: 148 -VMAWGLDIIIHIAHRISVAHNEFC 171
++ + + + RI
Sbjct: 461 DILEQFVLFVNRVLVRIEQWPLATV 485
>gi|323492533|ref|ZP_08097681.1| ComEC/rec2 family protein [Vibrio brasiliensis LMG 20546]
gi|323313320|gb|EGA66436.1| ComEC/rec2 family protein [Vibrio brasiliensis LMG 20546]
Length = 746
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 64/168 (38%), Gaps = 5/168 (2%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + + ++ +F + V + N+L +P S++V+P +A+ M+ +
Sbjct: 362 LQFALVIAMAPIVVYYFQGVSVGSVAYNLLFVPWFSWLVMPLAFVALSAMLAGVGTSWLW 421
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+D ++ + + + +E+ ++ + ++ + R +++ +
Sbjct: 422 ---SAVDWSLYPVNWM-LIRSEWGWYQLSQWQLKWLLTGLFVFSLLWLIRRKAMLLIMSM 477
Query: 208 TIIILFTFPYSFSPDL-LISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
++ + + S L + L +V+++ Y + S
Sbjct: 478 LVLSSINWSATPSWQLTTLDVGHGLAVVVEQDEQALLYDTGAGWETSS 525
>gi|114047985|ref|YP_738535.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. MR-7]
gi|113889427|gb|ABI43478.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. MR-7]
Length = 773
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 45/136 (33%), Gaps = 11/136 (8%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + I L P G F + ++ I Y + S+
Sbjct: 296 RRYSSAWDRLLFALFIVLLVDPLACLSAG-----FWLSFCALAIILY------TLESAPV 344
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ K ++ +I S + F + V+ L N+L +P S
Sbjct: 345 AQSIENKATFMVRARIRFAQFWSIQWRLSLVLGLVQAIFFGGLSVHSLWMNMLVVPWFSL 404
Query: 125 VVIPAGLIAILLMILS 140
+VIP ++A+++ +
Sbjct: 405 IVIPLSMLALIIWWIG 420
>gi|302333264|gb|ADL23457.1| competence protein ComEC [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 726
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 60/196 (30%), Gaps = 9/196 (4%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 419
Query: 182 TIVVEF-LLMVFCKTN 196
++ +
Sbjct: 420 IFIISVYYIFCLLAKR 435
>gi|229508023|ref|ZP_04397528.1| hypothetical protein VCF_003257 [Vibrio cholerae BX 330286]
gi|229511738|ref|ZP_04401217.1| hypothetical protein VCE_003147 [Vibrio cholerae B33]
gi|229518876|ref|ZP_04408319.1| hypothetical protein VCC_002903 [Vibrio cholerae RC9]
gi|229607570|ref|YP_002878218.1| hypothetical protein VCD_002482 [Vibrio cholerae MJ-1236]
gi|229343565|gb|EEO08540.1| hypothetical protein VCC_002903 [Vibrio cholerae RC9]
gi|229351703|gb|EEO16644.1| hypothetical protein VCE_003147 [Vibrio cholerae B33]
gi|229355528|gb|EEO20449.1| hypothetical protein VCF_003257 [Vibrio cholerae BX 330286]
gi|229370225|gb|ACQ60648.1| hypothetical protein VCD_002482 [Vibrio cholerae MJ-1236]
Length = 747
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 39/222 (17%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 331 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDII 156
F + V ++ N++ IP S V++PA + +LLM++ W +D
Sbjct: 372 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWPWVDWT 428
Query: 157 ---IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITIII 211
+ A + + + + V V LL+ R + + +I
Sbjct: 429 FLPLDWALQFADVG--WWVVPSKVQGVVAASVAILLL------YRFMSLKACSLLLGMIG 480
Query: 212 LFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ + S +P ++ L +++++ Y S+
Sbjct: 481 LWWWFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 522
>gi|312140321|ref|YP_004007657.1| DNA internalization competence protein comec/rec2 [Rhodococcus equi
103S]
gi|311889660|emb|CBH48977.1| putative DNA internalization competence protein ComEC/Rec2
[Rhodococcus equi 103S]
Length = 792
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 69/251 (27%), Gaps = 21/251 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + PS DF F+ + + +
Sbjct: 326 RRKQAIPALAASVVVLLALSPSLAV-----DFGFALSVFATAGLVVVSPALVARLRARGW 380
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W + + + + + + ++AN+L P ++ +
Sbjct: 381 PRWLAE-------------MCAVALAAFVVTAPLVAAMSGTVSIVSIVANVLVAPAVAPI 427
Query: 126 VIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ A+L ++ + V L ++ +A R + R V +
Sbjct: 428 TVVGAATAVLAVVWLPAAALLVRVAGPPLWWLLEVADRAAAVPGGNLAVRNGLGGAVIVA 487
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA--LVDKNTLIS 242
V + V + ++ + P F + LVA + + L+
Sbjct: 488 VGIAVAVLAARHPWSRRMLLAVAVGVAAVWVPTRFHQPGWPASGWALVACDVGQGDGLVL 547
Query: 243 NYSNPPSFIFS 253
+ + +
Sbjct: 548 SAGGRRAVVVD 558
>gi|15641881|ref|NP_231513.1| Rec2-related protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121587302|ref|ZP_01677074.1| ComEC/rec2 family protein [Vibrio cholerae 2740-80]
gi|121727104|ref|ZP_01680278.1| ComEC/rec2 family protein [Vibrio cholerae V52]
gi|147673615|ref|YP_001217413.1| ComEC/rec2 family protein [Vibrio cholerae O395]
gi|153818868|ref|ZP_01971535.1| ComEC/rec2 family protein [Vibrio cholerae NCTC 8457]
gi|227082009|ref|YP_002810560.1| Rec2-related protein [Vibrio cholerae M66-2]
gi|254848967|ref|ZP_05238317.1| ComEC/rec2 family protein [Vibrio cholerae MO10]
gi|298498080|ref|ZP_07007887.1| ComEC/rec2 family protein [Vibrio cholerae MAK 757]
gi|9656410|gb|AAF95027.1| Rec2-related protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121548462|gb|EAX58520.1| ComEC/rec2 family protein [Vibrio cholerae 2740-80]
gi|121630482|gb|EAX62874.1| ComEC/rec2 family protein [Vibrio cholerae V52]
gi|126510596|gb|EAZ73190.1| ComEC/rec2 family protein [Vibrio cholerae NCTC 8457]
gi|146315498|gb|ABQ20037.1| ComEC/rec2 family protein [Vibrio cholerae O395]
gi|227009897|gb|ACP06109.1| Rec2-related protein [Vibrio cholerae M66-2]
gi|227013777|gb|ACP09987.1| Rec2-related protein [Vibrio cholerae O395]
gi|254844672|gb|EET23086.1| ComEC/rec2 family protein [Vibrio cholerae MO10]
gi|297542413|gb|EFH78463.1| ComEC/rec2 family protein [Vibrio cholerae MAK 757]
Length = 752
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 39/222 (17%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 336 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 376
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDII 156
F + V ++ N++ IP S V++PA + +LLM++ W +D
Sbjct: 377 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWPWVDWT 433
Query: 157 ---IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITIII 211
+ A + + + + V V LL+ R + + +I
Sbjct: 434 FLPLDWALQFADVG--WWVVPSKVQGVVAASVAILLL------YRFMSLKACSLLLGMIG 485
Query: 212 LFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ + S +P ++ L +++++ Y S+
Sbjct: 486 LWWWFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 527
>gi|333006355|gb|EGK25863.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri VA-6]
Length = 427
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 66/218 (30%), Gaps = 35/218 (16%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 169 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 217
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 218 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPMQIVIFHGISLTSFIANLFAIPLVTFI 271
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+P L A+++ ++ GL +
Sbjct: 272 TVPLILAAMVVHFSG-----PLILEQGLK----------SLPEGWINIVECWQWLSFSP- 315
Query: 186 EFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
+ L+V + N R + + + +++ + PD
Sbjct: 316 -WFLLVVWRLNAWRTLPVMCVAGGLLMCWPLWQKPRPD 352
>gi|331003937|ref|ZP_08327426.1| DNA internalization-like competence protein ComEC/Rec2
[Lachnospiraceae oral taxon 107 str. F0167]
gi|330411957|gb|EGG91357.1| DNA internalization-like competence protein ComEC/Rec2
[Lachnospiraceae oral taxon 107 str. F0167]
Length = 752
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 53/136 (38%), Gaps = 15/136 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + Y A L P P G F +F++ I + K ++
Sbjct: 305 LGRSYCIISALCISAVFICLISPFEPFGVG-FQLSFAAVLSLGGPIDFIL---KKFRPNQ 360
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
SH + K ++ S ++ ++ +F+ P+Y + N++ IP++
Sbjct: 361 SHKKYINKIFDALVVSIGVQLF----------TLPLILYYFYTFPIYAFLLNLIVIPLMI 410
Query: 124 FVVIPAGLIAILLMIL 139
V+ + + ++LL I+
Sbjct: 411 PVLY-SAIFSLLLNII 425
>gi|153830808|ref|ZP_01983475.1| ComEC/rec2 family protein [Vibrio cholerae 623-39]
gi|148873715|gb|EDL71850.1| ComEC/rec2 family protein [Vibrio cholerae 623-39]
Length = 752
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 39/222 (17%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 336 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 376
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDII 156
F + V ++ N++ IP S V++PA + +LLM++ W +D
Sbjct: 377 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWPWVDWT 433
Query: 157 ---IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITIII 211
+ A + + + + V V LL+ R + + +I
Sbjct: 434 FLPLDWALQFADVG--WWVVPSKVQGVVAASVAILLL------YRFMSLKACSLLLGMIG 485
Query: 212 LFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ + S +P ++ L +++++ Y S+
Sbjct: 486 LWWWFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 527
>gi|294782460|ref|ZP_06747786.1| COME operon protein 3 [Fusobacterium sp. 1_1_41FAA]
gi|294481101|gb|EFG28876.1| COME operon protein 3 [Fusobacterium sp. 1_1_41FAA]
Length = 392
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 23/166 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L K P + + P +F +F Y + I Y + + I
Sbjct: 218 LFYEKINLPKSLIISAYLSILIKP------TVVFSLSFQLSYGAMVVIIYIFPYIRKI-- 269
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+KKI + T + +F+ I LI+N++ +P+
Sbjct: 270 -------NYKKIKFLDYFL-------FTTTIQVFLIPITVYYFNTIQFLSLISNLVVLPL 315
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
SF + IA+ L L + ++ + +I++ S
Sbjct: 316 ASFYIT-INYIALFLENFYLSFLLKPIIKISYNFLIYLIDFFSNFS 360
>gi|326335458|ref|ZP_08201645.1| competence protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692224|gb|EGD34176.1| competence protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 662
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 20/132 (15%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
I L P LF+ F Y + +I F W + +
Sbjct: 327 AFILLLCKPMF-----LFEVGFQLSYMAVLSIELFLP----------FFNKYWFYENKLL 371
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
F + I + + +FH LI N++ +P L ++ ++ L
Sbjct: 372 NLFPSII--KVSIAAQIGIIPLSLYYFHQFAGLFLITNMIILPFLGIILGLGIIVVFLS- 428
Query: 138 ILSLDNIPFGVM 149
S+ ++P+ ++
Sbjct: 429 --SIHSLPYWLV 438
>gi|325677103|ref|ZP_08156772.1| ComEC operon protein [Rhodococcus equi ATCC 33707]
gi|325552088|gb|EGD21781.1| ComEC operon protein [Rhodococcus equi ATCC 33707]
Length = 792
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 69/251 (27%), Gaps = 21/251 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + PS DF F+ + + +
Sbjct: 326 RRKQAIPALAASVVVLLALSPSLAV-----DFGFALSVFATAGLVVVSPALVARLRARGW 380
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W + + + + + + ++AN+L P ++ +
Sbjct: 381 PRWLAE-------------MCAVALAAFVVTAPLVAAMSGTVSIVSIVANVLVAPAVAPI 427
Query: 126 VIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ A+L ++ + V L ++ +A R + R V +
Sbjct: 428 TVVGAATAVLAVVWLPAAALLVRVAGPPLWWLLEVADRAAAVPGGNLAVRNGLGGAVIVA 487
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA--LVDKNTLIS 242
V + V + ++ + P F + LVA + + L+
Sbjct: 488 VGIAVAVLAARHPWSRRMLLAVAVGVAAVWVPTRFHQPGWPASGWALVACDVGQGDGLVL 547
Query: 243 NYSNPPSFIFS 253
+ + +
Sbjct: 548 SAGGRRAVVVD 558
>gi|156973824|ref|YP_001444731.1| hypothetical protein VIBHAR_01534 [Vibrio harveyi ATCC BAA-1116]
gi|156525418|gb|ABU70504.1| hypothetical protein VIBHAR_01534 [Vibrio harveyi ATCC BAA-1116]
Length = 752
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/248 (9%), Positives = 68/248 (27%), Gaps = 31/248 (12%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P+ I P F +F Y + +
Sbjct: 306 WSPWRVLLLAVSIQLFIEPFA-----SFTMSFWLSYL-------------SVVAVLLAVN 347
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
++ + + + I + F + + N++ IP F+V+
Sbjct: 348 VVQQRRGNWQTKLSS--LLKIQLVLTLLIVPISGAFFSGTSLVSIAYNLVFIPWFGFLVV 405
Query: 128 PAGLIAILLMI--LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
P +A+++ L + + + +D ++ ++
Sbjct: 406 PLMFLALIVTPISFQLAGMLWQL----VDWVLLSLTW--SLQFAVGSWHFVSLPLTLTIL 459
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+ + + + + I + + F + + L L++K+ ++
Sbjct: 460 AVAICGLLRRFLNRGSFVTLVILVTGVALFYERTTNSWRVDVLDVGHGLAVLIEKHGKVT 519
Query: 243 NYSNPPSF 250
Y ++
Sbjct: 520 LYDTGKAW 527
>gi|325920379|ref|ZP_08182310.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas gardneri ATCC 19865]
gi|325549126|gb|EGD20049.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas gardneri ATCC 19865]
Length = 798
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/161 (11%), Positives = 46/161 (28%), Gaps = 24/161 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + T +
Sbjct: 369 GFWLSFAGVAWLVWCLPSDDRA---------------------ILRGFLSAQTVATVGLL 407
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F G AN++AIP +FVV+P L+ L L + + W ++
Sbjct: 408 PLTVSLFGQASFVGPFANLVAIPWWTFVVVPLALLGTALEALHPGAGVWAWRLAGWCFEL 467
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + + + V ++ ++ +
Sbjct: 468 TWPGFVWLGQTSVALWWVPESDAIALVLALLGAFWLLLPRG 508
>gi|94967171|ref|YP_589219.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Koribacter versatilis Ellin345]
gi|94549221|gb|ABF39145.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Koribacter versatilis Ellin345]
Length = 868
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 81/295 (27%), Gaps = 54/295 (18%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAI---------------- 49
++ A + P LFD +F + ++ I
Sbjct: 352 RQSSRLNAIGVAALVILAWSPDA-----LFDASFQLTFLSVAVIAGVVVPWIERTSDPYR 406
Query: 50 -------------GY----------FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA 86
GY I + H + + +F
Sbjct: 407 KALQNLNIVRADRGYRPQQQQFRLDLRMIGGRLARVLPHRIVRPMLTTPFRVTFAAYELL 466
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI--LSLDNI 144
+ + ++ + +FH + + +AN L +P+ V++PA A+LL L L +
Sbjct: 467 LVSLLMEFTLALPMAVYFHRVTLMAPVANALVVPLTG-VLMPACAAAVLLGFVWLRLARL 525
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR-HIGSI 203
P V W L I + P + + R + ++
Sbjct: 526 PAMVALWSLKAITGAVAVLGHLRVSTGRVATPSLVVALSAAVAIALAMLLARRRCWLAAV 585
Query: 204 ----MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
+I +LF P + V ++L+ Y N S +
Sbjct: 586 GSLAIIASGAAVLFIVPQPQHKSGALEVTAIDVG--QGDSLLLVYPNGQSMLLDS 638
>gi|225175097|ref|ZP_03729093.1| DNA internalization-related competence protein ComEC/Rec2
[Dethiobacter alkaliphilus AHT 1]
gi|225169273|gb|EEG78071.1| DNA internalization-related competence protein ComEC/Rec2
[Dethiobacter alkaliphilus AHT 1]
Length = 778
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 68/247 (27%), Gaps = 33/247 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF +F + + I + + + S+ + +
Sbjct: 341 LFSLSFQFSFAATAGILLLSPRLQ-------------QYLVSLPPQVSGPMAVTV--AAQ 385
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAW 151
+ HF + + N+L +P++ +V+ GL IL L+ L L
Sbjct: 386 LAVLPLQANHFGLFSLLAVPVNLLCVPLVG-LVMALGLAGILFGLVSLPLSAPFLFAALP 444
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR----------HIG 201
L I+ + ++ + + L+M + + R +G
Sbjct: 445 ALLILEGLPQSLASLPFAALRVPVVHPVIWLLYGTLLVMFVARISFRPVTGKKLLAVLVG 504
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN----YSNPPSFIFSQWKS 257
++ ++ ++ + + +G V + F +
Sbjct: 505 LNILLFALLPVWGQAPLEVTFIDV-GQGMAVHVRTPAGSNLLIDAGKPGQGQFAVLPYLR 563
Query: 258 ALITPFH 264
A
Sbjct: 564 AAGVRSL 570
>gi|262191319|ref|ZP_06049512.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae CT 5369-93]
gi|262032815|gb|EEY51360.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae CT 5369-93]
Length = 747
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 39/222 (17%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 331 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDII 156
F + V ++ N++ IP S V++PA + +LLM++ W +D
Sbjct: 372 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWPWVDWT 428
Query: 157 ---IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITIII 211
+ A + + + + V V LL+ R + + +I
Sbjct: 429 FLPLDWALQFADVG--WWVVPSKVQGVVAASVAILLL------YRFMSLKACSLLLGMIG 480
Query: 212 LFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ + S +P ++ L +++++ Y S+
Sbjct: 481 LWWWFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 522
>gi|162420003|ref|YP_001606431.1| hypothetical protein YpAngola_A1958 [Yersinia pestis Angola]
gi|162352818|gb|ABX86766.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis Angola]
Length = 763
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 86/292 (29%), Gaps = 29/292 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNT 67
P+ G+ +S P +F + ++ +F+ P
Sbjct: 311 SPWQVWRWALGLILVSDPLAVLS-----DSFWLSCLAVFSLICWFHLAPVSSRFITGWYG 365
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + I FH I ++ + AN+ A+PI+S +
Sbjct: 366 LVIRWFH-------------LQFGMMLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTV 412
Query: 128 PAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P L+A+ L +L I + + L +++ +++ S
Sbjct: 413 PCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKE-----GWLHTGMASVAIGYGG 467
Query: 187 FLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+L + + R +I + + ++ + + L ++++
Sbjct: 468 WLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIRHGLAVVIEREGKAI 527
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
Y + + ++ P + + E + + ++ F
Sbjct: 528 IYDTGNHWSTGNMAAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAF 579
>gi|153825170|ref|ZP_01977837.1| ComEC/rec2 family protein [Vibrio cholerae MZO-2]
gi|149741149|gb|EDM55200.1| ComEC/rec2 family protein [Vibrio cholerae MZO-2]
Length = 752
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 39/222 (17%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 336 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 376
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDII 156
F + V ++ N++ IP S V++PA + +LLM++ W +D
Sbjct: 377 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWPWVDWT 433
Query: 157 ---IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITIII 211
+ A + + + + V V LL+ R + + +I
Sbjct: 434 FLPLDWALQFADVG--WWVVPSKVQGVVAASVAILLL------YRFMSLKACSLLLGMIG 485
Query: 212 LFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ + S +P ++ L +++++ Y S+
Sbjct: 486 LWWWFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 527
>gi|239816377|ref|YP_002945287.1| DNA internalization-related competence protein ComEC/Rec2
[Variovorax paradoxus S110]
gi|239802954|gb|ACS20021.1| DNA internalization-related competence protein ComEC/Rec2
[Variovorax paradoxus S110]
Length = 747
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/238 (13%), Positives = 75/238 (31%), Gaps = 28/238 (11%)
Query: 1 MLSITKKYDPFP-AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L +T + P+P I + P F + + I + +
Sbjct: 292 LLRLTGRRWPWPHVWLLIAAVVVAVDPWALM-----QAGFWLSFVAVG-ILFATGFMRPA 345
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ + + + + + F + V GL+AN +AI
Sbjct: 346 EEAAGRSARLLAFFRE-------------QWVITLALTPLSLLLFQQVSVVGLLANAVAI 392
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
P ++ VV P ++ + L + + AW + + + ++ P
Sbjct: 393 PWVTLVVTPLAMLGAVAPPL------WDLAAWAVQALALLLRWLAALPYATLSMAAPPVW 446
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF--SPDLLISEKGNLVALV 235
V +++ + + + ++L+ P +LL ++ G A++
Sbjct: 447 MAACGVAGGVLLAMRLPWSLRTLGLPLLLPVLLWHAPRPAAGQFELLAADIGQGNAIL 504
>gi|170720694|ref|YP_001748382.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida W619]
gi|169758697|gb|ACA72013.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida W619]
Length = 737
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 81/232 (34%), Gaps = 27/232 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
++ P P PG F + ++ + Y + S W+ ++
Sbjct: 314 VLVAEPLAPLLPG-----FWLSFAAVATLVYCF----------SSRLGRWRPWQGWTRAQ 358
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + + +AN+LA+P +S V+P L+ LL+ L+
Sbjct: 359 WVIAIGLLPVLIATGLP---------VSLSAPLANLLAVPWISLAVLPLALLGTLLLPLA 409
Query: 141 -LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + LD++ + ++ + +P +++ + + LL++ +R
Sbjct: 410 GVGEGLLWLAGGLLDVLFRLLAWVAHWRPAWLPPALPVWAWLMVCLGALLVLLPSGVPLR 469
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLIS-EKGNLVALVDKNTLISNYSNPPS 249
+G M+ + P + +G V L +N + + P
Sbjct: 470 SLGGAMLLALWVPREAVPQGQVEVWQLDVGQGLAVLLRTQNHSLLYDAGPAR 521
>gi|33152346|ref|NP_873699.1| recombination protein 2 [Haemophilus ducreyi 35000HP]
gi|33148569|gb|AAP96088.1| recombination protein 2 [Haemophilus ducreyi 35000HP]
Length = 762
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 68/228 (29%), Gaps = 14/228 (6%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
Y + I I + P +F + ++ +Y +
Sbjct: 299 YTAWQLWWRIVAILLVLDPLAILS-----DSFWLSILAVLSLIIWYQYFPLTEFIVQKKN 353
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
K + S + + + F + I N+L +P SF+V+
Sbjct: 354 KKLPKFYRLLLSLAHLQLGILCV-----FAPVQYYFFEGLSAVAFITNLLIVPYYSFLVV 408
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA--HRISVAHNEFCIGRIPETSFVTIVV 185
P LI++L + G I++ A H ++ ++ I + ++
Sbjct: 409 PLILISLLTNNFFHTWQLTDQLIQGSLTILNTASTHWFWLSQSQQWQLLIGFAGLLVMLY 468
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+ G I++ + + S + + + G +A
Sbjct: 469 GIFYAKSKWFWWQSAGLILVSVLFHLFI--FSSKKIEWITFDVGQGLA 514
>gi|254286764|ref|ZP_04961718.1| ComEC/rec2 family protein [Vibrio cholerae AM-19226]
gi|150423191|gb|EDN15138.1| ComEC/rec2 family protein [Vibrio cholerae AM-19226]
Length = 752
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 39/222 (17%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 336 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 376
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDII 156
F + V ++ N++ IP S V++PA + +LLM++ W +D
Sbjct: 377 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWPWVDWT 433
Query: 157 ---IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITIII 211
+ A + + + + V V LL+ R + + +I
Sbjct: 434 FLPLDWALQFADVG--WWVVPSKVQGVVAASVAILLL------YRFMSLKACSLLLGMIG 485
Query: 212 LFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ + S +P ++ L +++++ Y S+
Sbjct: 486 LWWWFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 527
>gi|298505769|gb|ADI84492.1| competence protein, ComEC-related, putative [Geobacter
sulfurreducens KN400]
Length = 796
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 74/219 (33%), Gaps = 18/219 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ DP T + P P LFD +F + + + P +
Sbjct: 324 LWLERETDPINVLTMAALAMLAANP-----PSLFDISFQLSFLALWGLVVLT--PVFTHP 376
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + K + + T + + + FH V G+I+N+ +P+
Sbjct: 377 LCTLDNGVVKNVILL---------LAASTAATLVTFLPVGHAFHRATVAGIISNVFIVPL 427
Query: 122 LSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+ + + AG A+ L+ ++ + +W + + I ++
Sbjct: 428 MGYGAVVAGFAALPLIAVAPVAAGPLITIASWLVALSNRIIEWLARIPPVPLHSVTRSDL 487
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
V+ +V L + R + + + + + L +
Sbjct: 488 LVSFLVLLGLTLLPGRRARILVAGIGALALSALHLPAMA 526
>gi|224456415|ref|ZP_03664888.1| putative ComEC/Rec2-related protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370024|ref|ZP_04986031.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|151568269|gb|EDN33923.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|282158476|gb|ADA77867.1| Putative ComEC/Rec2-related protein [Francisella tularensis subsp.
tularensis NE061598]
Length = 422
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 26/145 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L ++ + + + +
Sbjct: 13 KRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI-------------- 53
Query: 66 NTWTWKKISSIKQSFLNEI-RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++Q I TY + + +F V ++ANI+AIP++SF
Sbjct: 54 ------ISIVLQQYKSKLIKILLAQTYLAIFLVPISVYYFGGFSVVSILANIVAIPLVSF 107
Query: 125 VVIPAGLIAILLMILSLDNIPFGVM 149
V++P L+ +LL + ++ +M
Sbjct: 108 VIVPLLLLCLLLSFIGINLWLLPMM 132
>gi|325917580|ref|ZP_08179780.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas vesicatoria ATCC 35937]
gi|325536214|gb|EGD08010.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas vesicatoria ATCC 35937]
Length = 782
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 65/210 (30%), Gaps = 25/210 (11%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + +
Sbjct: 353 GFWLSFAGVA---------------------WLVWCLPTDDRSILRGFLSAQMVATVGLL 391
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F + G +AN++AIP +FVV+P L+ L L + + W ++
Sbjct: 392 PLTVSLFGQASLVGPLANLVAIPWWTFVVVPLCLLGTALEALHAGAGVWAWQLAGWCFEL 451
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILF 213
+ + + + + + ++ ++ + + + ++ +
Sbjct: 452 TWPVFVWLGQTTVALWWVPESDGIALIAALLGAFWLLLPRGTPGKAVAMLLWLPLLWPDR 511
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISN 243
T P + DL + + G +A++ + +
Sbjct: 512 TLPGAGEADLQVLDVGQGLAVLVRTQRHAL 541
>gi|213162301|ref|ZP_03348011.1| hypothetical protein Salmoneentericaenterica_20828 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
Length = 439
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 67/212 (31%), Gaps = 22/212 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+ ++ + ++Y + + ++ +
Sbjct: 11 SLWLSAFAVAGLLFWYQWFPAPNGNFP------------RGLRWLLNLLHLQAGITLLLL 58
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGLD 154
+ FH I V ++AN+ A+P ++FV +P L ++L L+ + + L
Sbjct: 59 PLQVALFHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALA 118
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ ++ ++ + + L+ + G+ ++
Sbjct: 119 ALFYL---LNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPL 175
Query: 215 F----PYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + +L +G +A+V + +I
Sbjct: 176 WRPINASGWQVHMLDVGQGLAIAIVRGDKVIL 207
>gi|219848253|ref|YP_002462686.1| ComEC/Rec2-related protein [Chloroflexus aggregans DSM 9485]
gi|219542512|gb|ACL24250.1| ComEC/Rec2-related protein [Chloroflexus aggregans DSM 9485]
Length = 503
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 63/195 (32%), Gaps = 14/195 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
++ ++ +P+ + L P L+D F +++ F
Sbjct: 306 TVERQSEPWRLLLAACWLLTLINPQT-----LWDLGFQLSALATASLFAF--------GK 352
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
++ + + ++ HF + + +ANIL +P++
Sbjct: 353 PMERWLACERWPNHPVTAAVREALTATLAAQVLTLPLMLYHFGNLSLVAPLANILIVPLV 412
Query: 123 SF-VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+++ AG + L+ L L + L I ++A +S + +
Sbjct: 413 PVAMLLSAGALIGGLVWLPLGQWLSPIAWLPLSWITNVAMILSQPAWAALTVPVFPIWLL 472
Query: 182 TIVVEFLLMVFCKTN 196
+V + + + +
Sbjct: 473 WMVYATIALYWLRQR 487
>gi|183179497|ref|ZP_02957708.1| ComEC/rec2 family protein [Vibrio cholerae MZO-3]
gi|183012908|gb|EDT88208.1| ComEC/rec2 family protein [Vibrio cholerae MZO-3]
Length = 753
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 39/222 (17%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 337 SFWMSFLAVAIVLYQLASQSQSQVWWKALLWAQVFLVCL-------------------MA 377
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDII 156
F + V ++ N++ IP S V++PA + +LLM++ W +D
Sbjct: 378 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWPWVDWT 434
Query: 157 ---IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITIII 211
+ A + + + + V V LL+ R + + +I
Sbjct: 435 FLPLDWALQFADVG--WWVVPSKVQGVVAASVAILLL------YRFMSLKACSLLLGMIG 486
Query: 212 LFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ + S +P ++ L +++++ Y S+
Sbjct: 487 LWWWFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 528
>gi|218710043|ref|YP_002417664.1| hypothetical protein VS_2063 [Vibrio splendidus LGP32]
gi|218323062|emb|CAV19239.1| hypothetical Rec2-related protein [Vibrio splendidus LGP32]
Length = 776
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 25/200 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + A+ Y + S+ + + I + +
Sbjct: 328 SFWLSFGALGAVLYIALNSQSSDSNPTFIDRALQLFK-------------IQLMLTFLIA 374
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA----ILLMILSLDNIPFGVMAWGL 153
F + F+ + + + N+L +P +S VVIP +A ++L +S + GL
Sbjct: 375 PFSMLFFNGVSLVSVFYNLLLLPWVSMVVIPLLFLAMFFSLILAPVS-GGVGLTTFNNGL 433
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFV-------TIVVEFLLMVFCKTNIRHIGSIMIG 206
+ + +S+ F + F V L F + SI+I
Sbjct: 434 SEQLWMLVNLSLEPLVFNLPFSERFWFQVDNHTIELSVFLILFFGFVSRYFKRALSILII 493
Query: 207 ITIIILFTFPYSFSPDLLIS 226
++ + F L+I
Sbjct: 494 TVFVLWWEFGKPQQDKLIID 513
>gi|39996757|ref|NP_952708.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter sulfurreducens PCA]
gi|39983645|gb|AAR35035.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter sulfurreducens PCA]
Length = 771
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 74/219 (33%), Gaps = 18/219 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ DP T + P P LFD +F + + + P +
Sbjct: 299 LWLERETDPINVLTMAALAMLAANP-----PSLFDISFQLSFLALWGLVVLT--PVFTHP 351
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + K + + T + + + FH V G+I+N+ +P+
Sbjct: 352 LCTLDNGVVKNVILL---------LAASTAATLVTFLPVGHAFHRATVAGIISNVFIVPL 402
Query: 122 LSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+ + + AG A+ L+ ++ + +W + + I ++
Sbjct: 403 MGYGAVVAGFAALPLIAVAPVAAGPLITIASWLVALSNRIIEWLARIPPVPLHSVTRSDL 462
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
V+ +V L + R + + + + + L +
Sbjct: 463 LVSFLVLLGLTLLPGRRARILVAGIGALALSALHLPAMA 501
>gi|269926772|ref|YP_003323395.1| ComEC/Rec2-related protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790432|gb|ACZ42573.1| ComEC/Rec2-related protein [Thermobaculum terrenum ATCC BAA-798]
Length = 469
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 17/163 (10%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
++D + I + Y S + ++++ +I
Sbjct: 307 SIYDIGMQLSVLATAGIIWLY---------PSVARAMARLPELLRETV------SISFVA 351
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAW 151
AS LI +F + ++AN+L P++ +I L +L ++ SL + +
Sbjct: 352 QASTMPLLIFYFGKVSHLAILANVLVAPLIPLEMILTVLTVVLGVLSASLGSAIGWLTGK 411
Query: 152 GLDIIIHIAHRISVAHNEFCIGRI-PETSFVTIVVEFLLMVFC 193
+ I++IA+ IS + I S V + F+ ++
Sbjct: 412 FVLAIVYIANSISEISAASELRLIVGPKSLVLYYLVFVAVILL 454
>gi|254368621|ref|ZP_04984637.1| hypothetical protein FTAG_01613 [Francisella tularensis subsp.
holarctica FSC022]
gi|157121524|gb|EDO65715.1| hypothetical protein FTAG_01613 [Francisella tularensis subsp.
holarctica FSC022]
Length = 671
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 26/145 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L ++ + + + +
Sbjct: 262 KRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI-------------- 302
Query: 66 NTWTWKKISSIKQSFLNEI-RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++Q I TY + + +F V ++ANI+AIP++SF
Sbjct: 303 ------ISIVLQQYKSKLIKILLAQTYLAIFLVPISVYYFGGFSVVSILANIVAIPLVSF 356
Query: 125 VVIPAGLIAILLMILSLDNIPFGVM 149
V++P L+ +LL + ++ +M
Sbjct: 357 VIVPLLLLCLLLSFIGINLWLLPMM 381
>gi|89257164|ref|YP_514526.1| competence-related protein [Francisella tularensis subsp.
holarctica LVS]
gi|156503390|ref|YP_001429455.1| ComEC/Rec2-related competence protein [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|290953362|ref|ZP_06557983.1| competence protein [Francisella tularensis subsp. holarctica URFT1]
gi|295313409|ref|ZP_06804016.1| competence protein [Francisella tularensis subsp. holarctica URFT1]
gi|89144995|emb|CAJ80355.1| Competence-related protein [Francisella tularensis subsp.
holarctica LVS]
gi|156253993|gb|ABU62499.1| ComEC/Rec2-related competence protein [Francisella tularensis
subsp. holarctica FTNF002-00]
Length = 671
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 26/145 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L ++ + + + +
Sbjct: 262 KRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI-------------- 302
Query: 66 NTWTWKKISSIKQSFLNEI-RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++Q I TY + + +F V ++ANI+AIP++SF
Sbjct: 303 ------ISIVLQQYKSKLIKILLAQTYLAIFLVPISVYYFGGFSVVSILANIVAIPLVSF 356
Query: 125 VVIPAGLIAILLMILSLDNIPFGVM 149
V++P L+ +LL + ++ +M
Sbjct: 357 VIVPLLLLCLLLSFIGINLWLLPMM 381
>gi|254375280|ref|ZP_04990760.1| hypothetical protein FTDG_01474 [Francisella novicida GA99-3548]
gi|151572998|gb|EDN38652.1| hypothetical protein FTDG_01474 [Francisella novicida GA99-3548]
Length = 671
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 26/145 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L ++ + + + +
Sbjct: 262 KRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI-------------- 302
Query: 66 NTWTWKKISSIKQSFLNEI-RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++Q I TY + + +F V ++ANI+AIP++SF
Sbjct: 303 ------ISIVLQQYKSKLIKILLAQTYLAIFLVPISVYYFGGFSVVSILANIVAIPLVSF 356
Query: 125 VVIPAGLIAILLMILSLDNIPFGVM 149
V++P L+ +LL + ++ +M
Sbjct: 357 VIVPLLLLCLLLSFIGINLWLLPMM 381
>gi|134302713|ref|YP_001122681.1| putative ComEC/Rec2-related protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050490|gb|ABO47561.1| Putative ComEC/Rec2-related protein [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 671
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 26/145 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L ++ + + + +
Sbjct: 262 KRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI-------------- 302
Query: 66 NTWTWKKISSIKQSFLNEI-RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++Q I TY + + +F V ++ANI+AIP++SF
Sbjct: 303 ------ISIVLQQYKSKLIKILLAQTYLAIFLVPISVYYFGGFSVVSILANIVAIPLVSF 356
Query: 125 VVIPAGLIAILLMILSLDNIPFGVM 149
V++P L+ +LL + ++ +M
Sbjct: 357 VIVPLLLLCLLLSFIGINLWLLPMM 381
>gi|260772491|ref|ZP_05881407.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio metschnikovii CIP 69.14]
gi|260611630|gb|EEX36833.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio metschnikovii CIP 69.14]
Length = 747
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 69/221 (31%), Gaps = 37/221 (16%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + +S + Y + + K+ + +
Sbjct: 331 SFWLSFLAVSFVIY-------------QVSVIDSRWPLWKKVLAGHLLLV------MLMA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F + +Y + N++ IP SFVV+P I + +MA + +
Sbjct: 372 PVTAYFFSGVSLYSALYNLVFIPWFSFVVVPLLFIVLC---------GNVLMADQVQWLW 422
Query: 158 HIAHRISVAHNEFCIGRIPETSFVT-----IVVEFLLMVFCKTNI---RHIGSIMIGITI 209
++ + +G + + L +V ++ R + +I + +
Sbjct: 423 TWVEA-ALMPFSWSLGFAEHSWLPVNQTWQYSLLALFLVMMLRSLLTARSLIAIGLLFSA 481
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
L P ++ ++ L ++++N Y S+
Sbjct: 482 TWLTIQPKAYWQVDMLDVGHGLAMIIERNGRYVLYDTGSSW 522
>gi|320015746|gb|ADV99317.1| putative membrane protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 660
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 85/292 (29%), Gaps = 29/292 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNT 67
P+ G+ +S P +F + ++ +F+ P
Sbjct: 208 SPWQVWRWALGLILVSDPLAVLS-----DSFWLSCLAVFSLICWFHLAPVSSRFITGWYG 262
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + I FH I ++ + AN+ A+PI+S +
Sbjct: 263 LVIRWFH-------------LQFGMMLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTV 309
Query: 128 PAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P L+A+ L +L I + + L +++ +++ S
Sbjct: 310 PCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKE-----GWLHTGMASVAIGYGG 364
Query: 187 FLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+L + + R +I + + ++ + L ++++
Sbjct: 365 WLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAI 424
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
Y + + ++ P + + E + + ++ F
Sbjct: 425 IYDTGNHWPTGNMAAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAF 476
>gi|57340130|gb|AAW50052.1| hypothetical protein FTT0179 [synthetic construct]
Length = 457
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 26/145 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L ++ + + + +
Sbjct: 39 KRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI-------------- 79
Query: 66 NTWTWKKISSIKQSFLNEI-RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++Q I TY + + +F V ++ANI+AIP++SF
Sbjct: 80 ------ISIVLQQYKSKLIKILLAQTYLAIFLVPISVYYFGGFSVVSILANIVAIPLVSF 133
Query: 125 VVIPAGLIAILLMILSLDNIPFGVM 149
V++P L+ +LL + ++ +M
Sbjct: 134 VIVPLLLLCLLLSFIGINLWLLPMM 158
>gi|11991259|gb|AAG42267.1|AF320590_1 competence protein 3 [Listeria monocytogenes]
Length = 267
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 14/138 (10%)
Query: 40 SSYYKGI--SAIGYFYSIPKMIYSSESHNTWT-------WKKISSIKQSFLNEIRANIGT 90
S + I S I +F P +I ++ + +Q I
Sbjct: 123 WSSFSAICLSFILFFLLQPYIIREVGFQLSYAVSFGIILLSRQILTRQQNAFTKSLAISF 182
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGV 148
+ +S ++ HF+ G+ N++ +P +P L +L + + + P +
Sbjct: 183 ISTIMSSAVMMYHFYSFSWVGIFFNLIYVPFYD-DYLPGCLTVFVLSFFTTEIFHFPEAM 241
Query: 149 MAWGLDI--IIHIAHRIS 164
+ + + + I+H A S
Sbjct: 242 LTFFIQLVEILHFARFAS 259
>gi|332529423|ref|ZP_08405383.1| DNA internalization-related competence protein ComEC/Rec2
[Hylemonella gracilis ATCC 19624]
gi|332041139|gb|EGI77505.1| DNA internalization-related competence protein ComEC/Rec2
[Hylemonella gracilis ATCC 19624]
Length = 674
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 60/176 (34%), Gaps = 22/176 (12%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNT--------------WTWKKISSIKQSFL 81
F + + + + P+ + +++ + + +
Sbjct: 480 QAGFWLSFVAVG-VLFAQGRPEDVTRTDTDDADPSSSRGLNRSLGRRLTRWGRRWLRPLG 538
Query: 82 NEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---- 137
+R + + + + F + + L+AN++AIP ++ VV P L+ L +
Sbjct: 539 RLLRE--QGIVTLALAPLTLLFFGQMSLVSLLANLVAIPWVTLVVTPLALLGSLGVVAEP 596
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVF 192
+L+ + AW + + + ++ + + P V LL+V
Sbjct: 597 LLAYSAPLWDAAAWAVQALNTVLASMAALPLATYSVPQAPLWMAWAGVAGGLLLVL 652
>gi|269203215|ref|YP_003282484.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus ED98]
gi|262075505|gb|ACY11478.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus ED98]
Length = 715
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 233 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 292
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 293 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 350
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 351 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 408
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 409 IFIISVYYIFWLLAKR 424
>gi|153947078|ref|YP_001401543.1| hypothetical protein YpsIP31758_2578 [Yersinia pseudotuberculosis
IP 31758]
gi|152958573|gb|ABS46034.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pseudotuberculosis IP 31758]
Length = 763
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 85/292 (29%), Gaps = 29/292 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNT 67
P+ G+ +S P +F + ++ +F+ P
Sbjct: 311 SPWQVWRWALGLILVSDPLAVLS-----DSFWLSCLAVFSLICWFHLAPVSSRFITGWYG 365
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + I FH I ++ + AN+ A+PI+S +
Sbjct: 366 LVIRWFH-------------LQFGMMLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTV 412
Query: 128 PAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P L+A+ L +L I + + L +++ +++ S
Sbjct: 413 PCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKE-----GWLHTGMASVAIGYGG 467
Query: 187 FLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+L + + R +I + + ++ + L ++++
Sbjct: 468 WLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAI 527
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
Y + + ++ P + + E + + ++ F
Sbjct: 528 IYDTGNHWPTGNMAAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAF 579
>gi|329733145|gb|EGG69482.1| DNA internalization competence protein ComEC/Rec2-like protein
[Staphylococcus aureus subsp. aureus 21193]
Length = 733
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 IFIISVYYIFWLLAKR 442
>gi|296276608|ref|ZP_06859115.1| hypothetical protein SauraMR_09674 [Staphylococcus aureus subsp.
aureus MR1]
gi|312829975|emb|CBX34817.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus ECT-R 2]
Length = 715
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 233 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 292
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 293 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 350
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 351 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 408
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 409 IFIISVYYIFWLLAKR 424
>gi|283770663|ref|ZP_06343555.1| competence protein ComEC [Staphylococcus aureus subsp. aureus H19]
gi|283460810|gb|EFC07900.1| competence protein ComEC [Staphylococcus aureus subsp. aureus H19]
Length = 733
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 IFIISVYYIFWLLAKR 442
>gi|253732241|ref|ZP_04866406.1| competence protein ComEC [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253724030|gb|EES92759.1| competence protein ComEC [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 726
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 419
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 420 IFIISVYYIFWLLAKR 435
>gi|148268071|ref|YP_001247014.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus JH9]
gi|150394140|ref|YP_001316815.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus JH1]
gi|147741140|gb|ABQ49438.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus JH9]
gi|149946592|gb|ABR52528.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus JH1]
gi|329727152|gb|EGG63608.1| DNA internalization competence protein ComEC/Rec2-like protein
[Staphylococcus aureus subsp. aureus 21172]
Length = 726
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 419
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 420 IFIISVYYIFWLLAKR 435
>gi|15924578|ref|NP_372112.1| late competence protein ComEC [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927168|ref|NP_374701.1| hypothetical protein SA1416 [Staphylococcus aureus subsp. aureus
N315]
gi|156979906|ref|YP_001442165.1| hypothetical protein SAHV_1575 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253315375|ref|ZP_04838588.1| hypothetical protein SauraC_04332 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255006373|ref|ZP_05144974.2| hypothetical protein SauraM_07890 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793664|ref|ZP_05642643.1| competence protein ComEC/Rec2 [Staphylococcus aureus A9781]
gi|258411037|ref|ZP_05681317.1| late competence protein ComEC [Staphylococcus aureus A9763]
gi|258420160|ref|ZP_05683115.1| late competence protein ComEC [Staphylococcus aureus A9719]
gi|258437419|ref|ZP_05689403.1| late competence protein ComEC [Staphylococcus aureus A9299]
gi|258443625|ref|ZP_05691964.1| late competence protein ComEC [Staphylococcus aureus A8115]
gi|258446833|ref|ZP_05694987.1| late competence protein ComEC [Staphylococcus aureus A6300]
gi|258448747|ref|ZP_05696859.1| late competence protein ComEC [Staphylococcus aureus A6224]
gi|258453564|ref|ZP_05701542.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus A5937]
gi|282893089|ref|ZP_06301323.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus A8117]
gi|282928221|ref|ZP_06335826.1| DNA internalization competence protein Com/Rec2 [Staphylococcus
aureus A10102]
gi|295406711|ref|ZP_06816516.1| DNA internalization-like competence protein ComEC/Rec2
[Staphylococcus aureus A8819]
gi|297245707|ref|ZP_06929572.1| DNA internalization-like competence protein ComEC/Rec2
[Staphylococcus aureus A8796]
gi|13701386|dbj|BAB42680.1| SA1416 [Staphylococcus aureus subsp. aureus N315]
gi|14247359|dbj|BAB57750.1| similar to late competence protein ComEC [Staphylococcus aureus
subsp. aureus Mu50]
gi|156722041|dbj|BAF78458.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|257787636|gb|EEV25976.1| competence protein ComEC/Rec2 [Staphylococcus aureus A9781]
gi|257840187|gb|EEV64651.1| late competence protein ComEC [Staphylococcus aureus A9763]
gi|257843871|gb|EEV68265.1| late competence protein ComEC [Staphylococcus aureus A9719]
gi|257848624|gb|EEV72612.1| late competence protein ComEC [Staphylococcus aureus A9299]
gi|257851031|gb|EEV74974.1| late competence protein ComEC [Staphylococcus aureus A8115]
gi|257854408|gb|EEV77357.1| late competence protein ComEC [Staphylococcus aureus A6300]
gi|257858025|gb|EEV80914.1| late competence protein ComEC [Staphylococcus aureus A6224]
gi|257864295|gb|EEV87045.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus A5937]
gi|282590028|gb|EFB95110.1| DNA internalization competence protein Com/Rec2 [Staphylococcus
aureus A10102]
gi|282764407|gb|EFC04533.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus A8117]
gi|285817270|gb|ADC37757.1| Late competence protein ComEC, DNA transport [Staphylococcus aureus
04-02981]
gi|294968458|gb|EFG44482.1| DNA internalization-like competence protein ComEC/Rec2
[Staphylococcus aureus A8819]
gi|297177358|gb|EFH36610.1| DNA internalization-like competence protein ComEC/Rec2
[Staphylococcus aureus A8796]
gi|315129866|gb|EFT85856.1| hypothetical protein CGSSa03_02233 [Staphylococcus aureus subsp.
aureus CGS03]
Length = 733
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 IFIISVYYIFWLLAKR 442
>gi|307729226|ref|YP_003906450.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. CCGE1003]
gi|307583761|gb|ADN57159.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. CCGE1003]
Length = 985
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 5/168 (2%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
A++ + + + + F IP+ G +AN AIP +S V PA L + L LD
Sbjct: 523 AAHVQLAVTLALAPLTVLWFAQIPLIGPLANAFAIPWVSVFVTPAVLAGMALPAP-LDAA 581
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGS 202
+ LD+++ +S + + + + T L + + +R
Sbjct: 582 ALRIAHALLDVMMAGLQWLSGPRWVLWWLPQPDGWALATAAAGVLWCLAPRGWPLRWAAP 641
Query: 203 I--MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP 248
+ + + P SF L +G+ V + + + + P
Sbjct: 642 LTWLPLVASAPSAPPPGSFRLTALDVGQGSSVLVETAHHALLFDAGPG 689
>gi|258424015|ref|ZP_05686897.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|257845636|gb|EEV69668.1| conserved hypothetical protein [Staphylococcus aureus A9635]
Length = 733
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 IFIISVYYIFWLLAKR 442
>gi|229529098|ref|ZP_04418488.1| hypothetical protein VCG_002191 [Vibrio cholerae 12129(1)]
gi|229332872|gb|EEN98358.1| hypothetical protein VCG_002191 [Vibrio cholerae 12129(1)]
Length = 747
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/222 (13%), Positives = 71/222 (31%), Gaps = 39/222 (17%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 331 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDII 156
F + V ++ N++ IP S V++PA + +LLM++ W +D
Sbjct: 372 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWPWVDWT 428
Query: 157 ---IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITIII 211
+ A + + + + V V LL+ R + + ++
Sbjct: 429 FLPLDWALQFADVG--WWVVPSKVQGVVAASVAILLL------YRFMSLKACSLLLGMMG 480
Query: 212 LFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
L+ + S +P ++ L +++++ Y S+
Sbjct: 481 LWWWFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 522
>gi|45441026|ref|NP_992565.1| hypothetical protein YP_1199 [Yersinia pestis biovar Microtus str.
91001]
gi|45435885|gb|AAS61442.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
Length = 763
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/292 (11%), Positives = 86/292 (29%), Gaps = 29/292 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNT 67
P+ G+ +S P +F + ++ +F+ P
Sbjct: 311 SPWQVWRWALGLILVSDPLAVLS-----DSFWLSCLAVFSLICWFHLAPVSSRFITGWYG 365
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + I FH I ++ + AN+ A+PI+S +
Sbjct: 366 LVIRWFH-------------LQFGMMLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTV 412
Query: 128 PAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P L+A+ L +L I + + L +++ +++ S
Sbjct: 413 PCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKE-----GWLHTGMASVAIGYGG 467
Query: 187 FLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+L + + R +I + + ++ S + L ++++
Sbjct: 468 WLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRSDEYHWRVDMLDIGHGLAVVIEREGKAI 527
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
Y + + ++ P + + E + + ++ F
Sbjct: 528 IYDTGNHWPTGNMAAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAF 579
>gi|78187205|ref|YP_375248.1| ComEC/Rec2-related protein [Chlorobium luteolum DSM 273]
gi|78167107|gb|ABB24205.1| ComEC/Rec2-related protein [Chlorobium luteolum DSM 273]
Length = 759
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 87/290 (30%), Gaps = 19/290 (6%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+K P + + + P PG F ++ I ++ H
Sbjct: 362 RKAFPLNSLALADVLLLSFDPLELFNPG-----FQMTNGAVAGI--------LLLLPRLH 408
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI---PIL 122
++ + + + +F + + G+ AN+ + ++
Sbjct: 409 PPAGSGGGLLAGGWHALRGSLSLTVAATVGVAPVIAMYFGSVSIVGIAANLPVVFFSSLM 468
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+ ++P L+ ++ ++ V GL I A S + +
Sbjct: 469 VYALLPMLLVNLVSGPVASLFASSAVYFSGLA--IDAARWFSAVPFASVPFSVGAAGALV 526
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
++ + R G++++ + + + + FS L V L ++
Sbjct: 527 WYALLAALLLFMMSARRAGAVLLLLAVADILVWVPLFSGGLAGPPSAVTVNLGRDVAMLF 586
Query: 243 NYSNPPSFI-FSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQP 291
+ I + + A ++A L +LK+ + S P
Sbjct: 587 SSGRESVMIDAGRDERAFGRIANQAQGYGLPPLSAAVAFALKDSVISRVP 636
>gi|330862897|emb|CBX73034.1| uncharacterized protein ycaI [Yersinia enterocolitica W22703]
Length = 418
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/230 (13%), Positives = 76/230 (33%), Gaps = 23/230 (10%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
I +FY +P + + L + I FH I
Sbjct: 2 ICWFYWVPFAPCFRTGWQGLVIRGLHLQLGMMLLLMPLQIVL-------------FHGIS 48
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAH 167
+ + AN+ A+P++S + +P L+A++ +L L + + + L ++ + ++
Sbjct: 49 LLSIPANLWAVPLVSLITVPCVLLALVFTLLPLVAGMFWSLADLSLTAVL-----LPLSP 103
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI- 225
S +L M+ + + R+ ++ + + ++ +
Sbjct: 104 MRIGWFYTGSASVAIGFGGWLAMLIWRFSWWRNYSIGVMVLCVNLVLFTQRRDEYQWRVD 163
Query: 226 --SEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
L ++++ + + S S +I P+ + E
Sbjct: 164 MLDIGHGLAVVIEREGKAIIFDTGNRWGTSSMASKVILPYLRWRGITIEQ 213
>gi|194289280|ref|YP_002005187.1| transporter DNA internalization/competence protein comec/rec2
family [Cupriavidus taiwanensis LMG 19424]
gi|193223115|emb|CAQ69120.1| putative TRANSPORTER, DNA internalization/competence protein
ComEC/Rec2 family [Cupriavidus taiwanensis LMG 19424]
Length = 812
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/214 (10%), Positives = 62/214 (28%), Gaps = 19/214 (8%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
P PG F + ++ I + + + +
Sbjct: 357 DPWAVMLPG-----FWLSFGAVAVIFFAARPGRDAARAGRWQRLRAALAAG--------- 402
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
A + + F + V +AN +AIP++S +V + + L L
Sbjct: 403 -ARTQWAVTIGLVPLTLLLFGQVSVVSPLANAVAIPVVSLLVT-PLALLGAALPLWLAAP 460
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK---TNIRHIG 201
V + + + + S + + + + ++ +R G
Sbjct: 461 VMAVAHFAMVALAAVLAWFSRQPWAMWEAASAGPAALLLAGSGVALLVAPVASARLRWHG 520
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
++++ ++ ++ + G A++
Sbjct: 521 ALLMLPMLVARGPPVADGQFRAVMFDVGQGTAVL 554
>gi|260597311|ref|YP_003209882.1| hypothetical protein CTU_15190 [Cronobacter turicensis z3032]
gi|260216488|emb|CBA29647.1| Uncharacterized protein ycaI [Cronobacter turicensis z3032]
Length = 752
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 82/250 (32%), Gaps = 27/250 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ P+ P L + A+ ++Y
Sbjct: 300 RQWTPWQVWVCCVAAILFCDPVAILSESL-----WLSAFAVGALIFWYQ----------- 343
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W + + + L + ++ + + FH I + L+AN++A+P+++F+
Sbjct: 344 ----WMPLRAEGKWRLLKSLLHLQCGMTLLLLPLQLLLFHGISLTSLLANLVAVPVVTFI 399
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+P L A++L + L + G + + + +
Sbjct: 400 AVPLVLAAMILDLAQLTWLEAGAGLLADRALAALFWLLRQLPPGWLSLDQRYQWLTLAP- 458
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-----LLISEKGNLVALVDKNTL 240
+++++ + I + I + +L + D ++ L +++++
Sbjct: 459 -WIMVIAWRAGWHRISPVTCSILLGLLTWPFWQKPADDAWRLHMLDIGHGLAIVIERHGR 517
Query: 241 ISNYSNPPSF 250
Y + ++
Sbjct: 518 AILYDSGNAW 527
>gi|262404227|ref|ZP_06080782.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. RC586]
gi|262349259|gb|EEY98397.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. RC586]
Length = 747
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 73/218 (33%), Gaps = 31/218 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y K+ K L +I +
Sbjct: 331 SFWMSFLAVAIVLY-------------QLASQGKRKVWWKTLLLAQISLV------CLMA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDI 155
F + + ++ N++ IP S V++PA + ++ L S + + + W +
Sbjct: 372 PVTAYFFGGLSITAVLYNLVFIPWFSLVIVPALFLGLVVTLTAPSWAAVYWPWVDWSF-L 430
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ A + + I +V+ L + + + ++I+ L+ +
Sbjct: 431 PLDWALQFADMGWVVIPQNIQGLIVAFVVLSMLY------RVMSLRACTFSLSIVGLWWW 484
Query: 216 PYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
S +P ++ L +++++ Y S+
Sbjct: 485 FPSTTPLWRMDVLDVGHGLAIVIEQDDRAIVYDTGSSW 522
>gi|108800478|ref|YP_640675.1| ComEC/Rec2-related protein [Mycobacterium sp. MCS]
gi|119869616|ref|YP_939568.1| ComEC/Rec2-related protein [Mycobacterium sp. KMS]
gi|108770897|gb|ABG09619.1| ComEC/Rec2-related protein [Mycobacterium sp. MCS]
gi|119695705|gb|ABL92778.1| ComEC/Rec2-related protein [Mycobacterium sp. KMS]
Length = 268
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/187 (8%), Positives = 48/187 (25%), Gaps = 15/187 (8%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F+ + + +I S + + + A + T +
Sbjct: 89 DAGFALSVAATAGLV-------VIAPVWSRRLTGRGWPKPVADAVGVAMAAQLVTAPLVA 141
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-IPFGVMAWGLD 154
+ + ++ANI+ P++ + + A L + + L
Sbjct: 142 GIS------GRVSLVSVLANIVVAPVIPPITVIGTAAAALCWLWPAGAGLLIRFTGPPLW 195
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ +A + + + +V R + + ++
Sbjct: 196 WLLRVADWAAAVPGASVPVPSGWAGVGLVAAGGIALVVLW-RWRWVRLAAGAAVLGLVAW 254
Query: 215 FPYSFSP 221
+
Sbjct: 255 SASGHAA 261
>gi|254226046|ref|ZP_04919645.1| ComEC/rec2 family protein [Vibrio cholerae V51]
gi|125621429|gb|EAZ49764.1| ComEC/rec2 family protein [Vibrio cholerae V51]
Length = 752
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 66/219 (30%), Gaps = 33/219 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 336 SFWMSFLAVAIVLYQLASQSQSQVWWKALLWAQVFLVCL-------------------MA 376
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F + V ++ N++ IP S V++PA + +LLM++ W
Sbjct: 377 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWP----- 428
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFL---LMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + V + + + + + + + ++ L+
Sbjct: 429 WVDWTFLPLDWALQFADVGWWVVPSKVQGVVAASVAILLHYRFMSLKACSLLLGMMGLWW 488
Query: 215 FPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
+ S +P ++ L +++++ Y S+
Sbjct: 489 WFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 527
>gi|225619109|ref|YP_002720335.1| hypothetical protein BHWA1_00159 [Brachyspira hyodysenteriae WA1]
gi|225213928|gb|ACN82662.1| hypothetical protein BHWA1_00159 [Brachyspira hyodysenteriae WA1]
Length = 544
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 70/166 (42%), Gaps = 10/166 (6%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + A I L P+ + D +F + I +Y I
Sbjct: 339 DRNRNAINALFLSGLIILLLNPN-----SIKDISFQFSFLATLGIIIYYPIFNFYIIKNI 393
Query: 65 HNTWTWKKISSIKQSFLNEIRA--NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
T KI+++ ++ ++ A +I + + + HFH I + +I+NI A+P+
Sbjct: 394 IKINTNNKITNLVKNISIKLLAFLSINIFALITVFPLSVYHFHIINITSIISNIFAVPL- 452
Query: 123 SFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVA 166
SF+++ + LI I+ + L P + +++I+++++ S
Sbjct: 453 SFMILSSSLITIITYQIYEPLSIFPSASAEFFSELLINLSNKFSSI 498
>gi|88810803|ref|ZP_01126060.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrococcus mobilis Nb-231]
gi|88792433|gb|EAR23543.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrococcus mobilis Nb-231]
Length = 756
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 63/243 (25%), Gaps = 29/243 (11%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ P A P P PG F + ++ I + +
Sbjct: 308 RRRIGPLRAWWGAMAAVLALDPFAPLGPG-----FWLSFTAVAVILLVVRRRPGVSRRQE 362
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + F + N+ AIP+
Sbjct: 363 LIG--------------------LQFALAVGLLPIMSAWFQRCSLIAPFINLAAIPLAGM 402
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWG---LDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+++P L+A + L + ++ + H + + +
Sbjct: 403 LLVPGALLATAALWLLPGLGSLLLQGLAWLTQSLLAGLGHLVHAVQPLVLLPTPEFWTLA 462
Query: 182 TIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
V L++ R + + ++ + P + + + + G ++V +
Sbjct: 463 LAAVGATLLLLPAGFPGRVLAVPLCVPLLVGVRASPSPGTAWITVLDVGQGSSVVVRTAR 522
Query: 241 ISN 243
Sbjct: 523 HIL 525
>gi|326791211|ref|YP_004309032.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium lentocellum DSM 5427]
gi|326541975|gb|ADZ83834.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium lentocellum DSM 5427]
Length = 777
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 73/246 (29%), Gaps = 33/246 (13%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ P LF F + + AI I + + + W +
Sbjct: 319 LALASLCILIVQPYQ-----LFAVGFQLSFLAMVAIIISQIIIEHLEEEKKMKLWHKWLL 373
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ S+ L HF+ +P + N + IP+ S ++I G
Sbjct: 374 PWLP--------------IQLILSLPLTYHFYQVPFLSSLLNFIVIPLFSLIMI--GGWG 417
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-----IGRIPETSFVT--IVVE 186
LLM L D ++A + +++ + + +GR + IV+
Sbjct: 418 CLLMGL-FDWPLGYLLASVISLLLQVISFMVRLVLSVPLSTICVGRPSGIELLLYIIVIG 476
Query: 187 FLLMVFC----KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
L K + ++ I+ + P + L +G+ ++ +
Sbjct: 477 LFLYGVWGIGNKIKLYACSCLLTLSLIVGIKVIPKELNVAFLYVGQGDGSVIITPKGQVI 536
Query: 243 NYSNPP 248
Sbjct: 537 VIDGGK 542
>gi|51595759|ref|YP_069950.1| hypothetical protein YPTB1419 [Yersinia pseudotuberculosis IP
32953]
gi|170024891|ref|YP_001721396.1| hypothetical protein YPK_2666 [Yersinia pseudotuberculosis YPIII]
gi|186894838|ref|YP_001871950.1| hypothetical protein YPTS_1521 [Yersinia pseudotuberculosis PB1/+]
gi|51589041|emb|CAH20659.1| putative DNA uptake protein ComEC/Rec2 [Yersinia pseudotuberculosis
IP 32953]
gi|169751425|gb|ACA68943.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pseudotuberculosis YPIII]
gi|186697864|gb|ACC88493.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pseudotuberculosis PB1/+]
Length = 763
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 85/292 (29%), Gaps = 29/292 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNT 67
P+ G+ +S P +F + ++ +F+ P
Sbjct: 311 SPWQVWRWALGLILVSDPLAVLS-----DSFWLSCLAVFSLICWFHLAPVSSRFITGWYG 365
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + I FH I ++ + AN+ A+PI+S +
Sbjct: 366 LVIRWFH-------------LQFGMMLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTV 412
Query: 128 PAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P L+A+ L +L I + + L +++ +++ S
Sbjct: 413 PCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKE-----GWLHTGMASVAIGYGG 467
Query: 187 FLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+L + + R +I + + ++ + L ++++
Sbjct: 468 WLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAI 527
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
Y + + ++ P + + E + + ++ F
Sbjct: 528 IYDTGNHWPTGNMAAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAF 579
>gi|253579927|ref|ZP_04857195.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848926|gb|EES76888.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 749
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 69/235 (29%), Gaps = 38/235 (16%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSS 62
I + P I L G F +F + IG + + + +
Sbjct: 259 IAGRIYDMPTGMAAAAILILMENPAYLLDGGFLLSF----GSVIGIGCVWPMVQEGMDVL 314
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ I+ L A + ++ + + V G+ N+L +P +
Sbjct: 315 NRKKRSKVNEKGKIRNKLLMSFLA--SGVVQLTTLPIVLWFYGEVSVMGIFLNLLVLPTV 372
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
V+ A+ L ++ ++V + F+T
Sbjct: 373 GIVLGSGTAGAL------------------LGLVTVRGAFLAVVPGRIILR---GYEFLT 411
Query: 183 IVVEFLLMVFCKTN----IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+++ L + +G ++ T + ++ ++ SE G + A
Sbjct: 412 VLLGRLSFCTWIGGKPEVWQIVGYYLVLATAVWIY------RAGVMKSENGKIFA 460
>gi|22126656|ref|NP_670079.1| hypothetical protein y2778 [Yersinia pestis KIM 10]
gi|108806682|ref|YP_650598.1| hypothetical protein YPA_0685 [Yersinia pestis Antiqua]
gi|145599573|ref|YP_001163649.1| hypothetical protein YPDSF_2301 [Yersinia pestis Pestoides F]
gi|149366651|ref|ZP_01888685.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|165924324|ref|ZP_02220156.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165938999|ref|ZP_02227552.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. IP275]
gi|166009869|ref|ZP_02230767.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166211467|ref|ZP_02237502.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167399853|ref|ZP_02305371.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167419591|ref|ZP_02311344.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423919|ref|ZP_02315672.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|218928542|ref|YP_002346417.1| hypothetical protein YPO1394 [Yersinia pestis CO92]
gi|229841364|ref|ZP_04461523.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843469|ref|ZP_04463615.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229895842|ref|ZP_04511012.1| putative membrane protein [Yersinia pestis Pestoides A]
gi|294503383|ref|YP_003567445.1| hypothetical protein YPZ3_1273 [Yersinia pestis Z176003]
gi|21959669|gb|AAM86330.1|AE013880_10 hypothetical protein y2778 [Yersinia pestis KIM 10]
gi|108778595|gb|ABG12653.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115347153|emb|CAL20046.1| putative membrane protein [Yersinia pestis CO92]
gi|145211269|gb|ABP40676.1| membrane protein [Yersinia pestis Pestoides F]
gi|149291025|gb|EDM41100.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|165913146|gb|EDR31770.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. IP275]
gi|165923384|gb|EDR40516.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165991265|gb|EDR43566.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166207238|gb|EDR51718.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166962332|gb|EDR58353.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167050561|gb|EDR61969.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167056768|gb|EDR66531.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|229689816|gb|EEO81877.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697730|gb|EEO87777.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700765|gb|EEO88794.1| putative membrane protein [Yersinia pestis Pestoides A]
gi|262361424|gb|ACY58145.1| hypothetical protein YPD4_1237 [Yersinia pestis D106004]
gi|262365040|gb|ACY61597.1| hypothetical protein YPD8_0909 [Yersinia pestis D182038]
gi|294353842|gb|ADE64183.1| hypothetical protein YPZ3_1273 [Yersinia pestis Z176003]
Length = 763
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 85/292 (29%), Gaps = 29/292 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNT 67
P+ G+ +S P +F + ++ +F+ P
Sbjct: 311 SPWQVWRWALGLILVSDPLAVLS-----DSFWLSCLAVFSLICWFHLAPVSSRFITGWYG 365
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + I FH I ++ + AN+ A+PI+S +
Sbjct: 366 LVIRWFH-------------LQFGMMLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTV 412
Query: 128 PAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P L+A+ L +L I + + L +++ +++ S
Sbjct: 413 PCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKE-----GWLHTGMASVAIGYGG 467
Query: 187 FLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+L + + R +I + + ++ + L ++++
Sbjct: 468 WLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAI 527
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
Y + + ++ P + + E + + ++ F
Sbjct: 528 IYDTGNHWPTGNMAAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAF 579
>gi|325282510|ref|YP_004255051.1| DNA internalization-related competence protein ComEC/Rec2
[Deinococcus proteolyticus MRP]
gi|324314319|gb|ADY25434.1| DNA internalization-related competence protein ComEC/Rec2
[Deinococcus proteolyticus MRP]
Length = 753
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/247 (10%), Positives = 67/247 (27%), Gaps = 22/247 (8%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ DP + ++ P PG F + + + + + ++ +
Sbjct: 309 RGRLDPPSLVALVAAGLLVAYPLWLVTPG-----FQLSFLAVGGLLLLPRVLARLPAAWT 363
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
S+ + A+ + F +P+ L AN+LA P+++
Sbjct: 364 RPGPPLWLTGSL----------AVTLLAQAATLPLVAGSFGGVPLSSLPANLLAGPLMAL 413
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH----NEFCIGRIPETSF 180
++ P G +A +L L + + ++ +A
Sbjct: 414 LI-PLGFLAGVLGPLG--AVLKWPLEALSAALLWLAETFGRWPLLPWGAVGPAGYLAYGL 470
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ L+ + ++ + + L +G+ +
Sbjct: 471 AALAGGLWLLGRIRPPAALATALACILLTALPPRLSPPRQLVFLDVGQGDSTLIQTPELR 530
Query: 241 ISNYSNP 247
+
Sbjct: 531 VLVDGGG 537
>gi|70726328|ref|YP_253242.1| hypothetical protein SH1327 [Staphylococcus haemolyticus JCSC1435]
gi|68447052|dbj|BAE04636.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 726
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+ S++I I HF+ I GL++N++ +P SF++ P +
Sbjct: 328 IFVLTFIAQLSSTIISIYHFNQIQWIGLLSNLIFVPFYSFIIFPLSIFLFFAYHF 382
>gi|322437063|ref|YP_004219275.1| DNA internalization-related competence protein ComEC/Rec2
[Acidobacterium sp. MP5ACTX9]
gi|321164790|gb|ADW70495.1| DNA internalization-related competence protein ComEC/Rec2
[Acidobacterium sp. MP5ACTX9]
Length = 864
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 63/193 (32%), Gaps = 3/193 (1%)
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
+ ++ + + + A +G ++ + FH V+ L AN+L
Sbjct: 419 LSAASHLKPIRYIPAQAFRLILWTLELALVGIVVELVMALPMAIFFHRAAVFALPANMLV 478
Query: 119 IPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+P+++ + PA + + +++ L +P + A L + + IS + P
Sbjct: 479 LPVIAILA-PAAVATFVASLINPWLAILPGTLTATLLHTLTSVISHISHLKSADVRIPPP 537
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
+ L G+++ + ++ P +L + AL
Sbjct: 538 SPWIAAAALAAWLTCCWAVRRSRAGTVITAAVLPLIAVAILWPEPPILTPNTLEITALDV 597
Query: 237 KNTLISNYSNPPS 249
+P
Sbjct: 598 GQGDSLLAVSPEG 610
>gi|229515260|ref|ZP_04404720.1| hypothetical protein VCB_002917 [Vibrio cholerae TMA 21]
gi|229347965|gb|EEO12924.1| hypothetical protein VCB_002917 [Vibrio cholerae TMA 21]
Length = 747
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 66/219 (30%), Gaps = 33/219 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 331 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F + V ++ N++ IP S V++PA + +LLM++ W
Sbjct: 372 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWP----- 423
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFL---LMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + V + + + + + + + ++ L+
Sbjct: 424 WVDWSFLPLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACSLLLGMMGLWW 483
Query: 215 FPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
+ S +P ++ L +++++ Y S+
Sbjct: 484 WFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 522
>gi|332291252|ref|YP_004429861.1| ComEC/Rec2-related protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169338|gb|AEE18593.1| ComEC/Rec2-related protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 646
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 52/178 (29%), Gaps = 18/178 (10%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+ A L P + F Y + I + Y+ +
Sbjct: 304 DAVMASAVLLLLYDPFL--IHQVGFQLSYLAVIGILWIQPWLSSFYTP------RYYIDR 355
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ A + + +FH P ++N++ IP L ++ L+ +
Sbjct: 356 LLWG------IATVSVAAQLGVLPLSLFYFHQFPGLFFLSNVIIIPFLGIILGGGILVVL 409
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
L ++ L + +D++ ++ F I + + I L +
Sbjct: 410 LAVLDILPETLVTTYGYAIDLMNGFIFWVANKE-AFITDHITISFALLI---GLYLCI 463
>gi|328676228|gb|AEB27098.1| competence protein [Francisella cf. novicida Fx1]
Length = 671
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 24/144 (16%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L ++ + + + + I ++ +S
Sbjct: 262 KRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI---ISIVLQQYKSK 313
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
T + + + + +F V ++ANI+AIP++SFV
Sbjct: 314 LTKILLAQTYL----------------AIFLVPISVYYFGGFSVVSILANIVAIPLVSFV 357
Query: 126 VIPAGLIAILLMILSLDNIPFGVM 149
++P L+ +LL + ++ +M
Sbjct: 358 IVPLLLLCLLLSFIGINLWLLPMM 381
>gi|297579398|ref|ZP_06941326.1| ComEC/rec2 family protein [Vibrio cholerae RC385]
gi|297536992|gb|EFH75825.1| ComEC/rec2 family protein [Vibrio cholerae RC385]
Length = 752
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 68/219 (31%), Gaps = 33/219 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 336 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 376
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F + V ++ N++ IP S V++PA + +LLM++ W
Sbjct: 377 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWP----- 428
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFL---LMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + V + +++ + + + ++++ L+
Sbjct: 429 WVDWTFLPLDWALQFADVGWWVVPSKVQGVVAASVVILLLYRFMSLKACSLLLSMMGLWW 488
Query: 215 FPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
+ S +P ++ L +++++ Y S+
Sbjct: 489 WFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 527
>gi|327484426|gb|AEA78833.1| Predicted hydrolase of the metallo-beta- lactamase superfamily
[Vibrio cholerae LMA3894-4]
Length = 674
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 69/223 (30%), Gaps = 41/223 (18%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 258 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 298
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDII 156
F + V ++ N++ IP S V++PA + +LLM++ W +D
Sbjct: 299 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWPWVDWT 355
Query: 157 ---IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ A + + + + V V +L+ R + + + ++
Sbjct: 356 FLPLDWALQFADVG--WWVVPSKVQGVVAASVAIVLL------YRFMSLKACSLLLSMMG 407
Query: 214 TFPYSF------SPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ + D+L L +++++ Y S+
Sbjct: 408 LWWWFPSLTPLWRMDVL-DVGHGLAIVIEQDERAIVYDTGSSW 449
>gi|208779960|ref|ZP_03247303.1| competence protein [Francisella novicida FTG]
gi|208743964|gb|EDZ90265.1| competence protein [Francisella novicida FTG]
Length = 671
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 24/144 (16%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L ++ + + + + I ++ +S
Sbjct: 262 KRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI---ISIVLQQYKSK 313
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
T + + + + +F V ++ANI+AIP++SFV
Sbjct: 314 LTKILLAQTYL----------------AIFLVPISVYYFGGFSVVSILANIVAIPLVSFV 357
Query: 126 VIPAGLIAILLMILSLDNIPFGVM 149
++P L+ +LL + ++ +M
Sbjct: 358 IVPLLLLCLLLSFIGINLWLLPMM 381
>gi|118496769|ref|YP_897819.1| competence protein [Francisella tularensis subsp. novicida U112]
gi|194324077|ref|ZP_03057852.1| competence protein [Francisella tularensis subsp. novicida FTE]
gi|118422675|gb|ABK89065.1| competence protein [Francisella novicida U112]
gi|194321974|gb|EDX19457.1| competence protein [Francisella tularensis subsp. novicida FTE]
Length = 671
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 24/144 (16%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L ++ + + + + I ++ +S
Sbjct: 262 KRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI---ISIVLQQYKSK 313
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
T + + + + +F V ++ANI+AIP++SFV
Sbjct: 314 LTKILLAQTYL----------------AIFLVPISVYYFGGFSVVSILANIVAIPLVSFV 357
Query: 126 VIPAGLIAILLMILSLDNIPFGVM 149
++P L+ +LL + ++ +M
Sbjct: 358 IVPLLLLCLLLSFIGINLWLLPMM 381
>gi|108812744|ref|YP_648511.1| hypothetical protein YPN_2583 [Yersinia pestis Nepal516]
gi|229903152|ref|ZP_04518265.1| putative membrane protein [Yersinia pestis Nepal516]
gi|108776392|gb|ABG18911.1| membrane protein [Yersinia pestis Nepal516]
gi|229678922|gb|EEO75025.1| putative membrane protein [Yersinia pestis Nepal516]
Length = 763
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 87/291 (29%), Gaps = 27/291 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
P+ G+ +S P +F + ++ ++ + + +
Sbjct: 311 SPWQVWRWALGLILVSDPLAVLS-----DSFWLSCLAVFSLICWFHLSPVSSRFITGWYG 365
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+ ++ I FH I ++ + AN+ A+PI+S +P
Sbjct: 366 LVIRWFHLQFGM------------MLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTVP 413
Query: 129 AGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
L+A+ L +L I + + L +++ +++ S +
Sbjct: 414 CVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKE-----GWLHTGMASVAIGYGGW 468
Query: 188 LLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLISN 243
L + + R +I + + ++ + L ++++
Sbjct: 469 LALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAII 528
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
Y + + ++ P + + E + + ++ F
Sbjct: 529 YDTGNHWPTGNMAAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAF 579
>gi|229523898|ref|ZP_04413303.1| hypothetical protein VCA_001477 [Vibrio cholerae bv. albensis
VL426]
gi|229337479|gb|EEO02496.1| hypothetical protein VCA_001477 [Vibrio cholerae bv. albensis
VL426]
Length = 747
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 68/219 (31%), Gaps = 33/219 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 331 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F + V ++ N++ IP S V++PA + +LLM++ W
Sbjct: 372 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWP----- 423
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFL---LMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + V + +++ + + + ++++ L+
Sbjct: 424 WVDWTFLPLDWALQFADVGWWVVPSKVQGVVAASVVILLLYRFMSLKACSLLLSMMGLWW 483
Query: 215 FPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
+ S +P ++ L +++++ Y S+
Sbjct: 484 WFPSLTPLWRMDVLDVGHGLAIVIEQDERAIVYDTGSSW 522
>gi|330014028|ref|ZP_08307844.1| DNA internalization competence protein ComEC/Rec2-like protein
[Klebsiella sp. MS 92-3]
gi|328533285|gb|EGF60037.1| DNA internalization competence protein ComEC/Rec2-like protein
[Klebsiella sp. MS 92-3]
Length = 741
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/319 (10%), Positives = 101/319 (31%), Gaps = 31/319 (9%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ + G ++ P L ++ + +++ +
Sbjct: 287 RWTAWQVWLCCLGAILVADPLAVLSQSL-----WLSAFAVAGLIFWFQWLPLPA---GRW 338
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W WK I ++ + + + FH + + + AN+LA+P+++ +
Sbjct: 339 RWPWKTIIALVH---------LQAGVTLLLLPLQLLLFHGVSLTSMAANLLAVPLVTLLA 389
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPETSFVTIVV 185
+P L A+L+ + + I ++ D ++ + + + + + +
Sbjct: 390 VPLILTAMLVHLSGPE-IVESLLWLAADRVLAVLFWGLRRLPDGWLT--LDARWLWISSL 446
Query: 186 EFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKNTL 240
+LL++ + + RH ++ + + ++ F D ++ L +++++
Sbjct: 447 PWLLVMGWRFQSWRHSPALCLSVLFLLTRPFSRQPPADEWRVTMLDVGQGLAMVIERHGK 506
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
Y P+ W P ++ LQ + E L +
Sbjct: 507 ALLYDTGPA-----WPQGDSGQQVIIPWLRWHHLQLQGIMLSHEHLDHRGGLDSVLQAWP 561
Query: 301 FCVGCHRSDVIVGVLKRKD 319
+ +
Sbjct: 562 QAWVRSPLGWAHHLPCHRG 580
>gi|304415502|ref|ZP_07396139.1| hypothetical protein REG_1906 [Candidatus Regiella insecticola
LSR1]
gi|304282641|gb|EFL91167.1| hypothetical protein REG_1906 [Candidatus Regiella insecticola
LSR1]
Length = 738
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 75/199 (37%), Gaps = 20/199 (10%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+ ++ P +F ++A+ ++++ + N K ++
Sbjct: 315 ALILVTDPLAVLS-----DSFWLSCLAVAALIFWWNWVPLTSVRSQTNPADRKNWRNLPL 369
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--L 136
+L+ + + FH + + L+AN+ A+PI+S + +PA L+A+L L
Sbjct: 370 RWLHLQLGMLLLLMPLQVGL-----FHGVSLSALVANMWAVPIVSIITVPAVLMALLTSL 424
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
M + + V +++I + + + + S + +L ++
Sbjct: 425 MPAVASWL-WYVADLSINMIFFPLNTLQK-----GWLAVGKNSILASYSGWLAVIIW--R 476
Query: 197 IRHIGSIMIGITIIILFTF 215
+ S I + ++ L +
Sbjct: 477 FQWWKSHSIAVLVLCLVLW 495
>gi|282908907|ref|ZP_06316725.1| late competence protein ComEC [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282327171|gb|EFB57466.1| late competence protein ComEC [Staphylococcus aureus subsp. aureus
WW2703/97]
Length = 580
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 63/196 (32%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + G+ F+ I Y I S
Sbjct: 98 TNYAPSAVRAIIMTTLVLLITNQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 157
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 158 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 215
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 216 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 273
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 274 IFIISVYYIFWLLAKR 289
>gi|282924688|ref|ZP_06332356.1| competence protein ComEC [Staphylococcus aureus subsp. aureus C101]
gi|282313523|gb|EFB43918.1| competence protein ComEC [Staphylococcus aureus subsp. aureus C101]
Length = 568
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 63/196 (32%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + G+ F+ I Y I S
Sbjct: 86 TNYAPSAVRAIIMTTLVLLITNQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 145
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 146 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 203
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 204 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 261
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 262 IFIISVYYIFWLLAKR 277
>gi|257414010|ref|ZP_04744971.2| DNA internalization-related competence protein ComEC/Rec2
[Roseburia intestinalis L1-82]
gi|257201506|gb|EEU99790.1| DNA internalization-related competence protein ComEC/Rec2
[Roseburia intestinalis L1-82]
Length = 813
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 27/154 (17%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D F + + + W K + S Q + + G
Sbjct: 339 ALYDAGFQLSFIAVLGVV-----------------WAGKIVQSAYQGYAVLQKIGTGFVL 381
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGLIAILLMI----LSLDNIP 145
+F+ IPVY ++ N+L +P + V+ I GL+ +M + + +P
Sbjct: 382 QLVILPVTAWYFYEIPVYAMLLNLLVLPFVGIVLASGIAGGLLGCAVMPQAVLVHIVLLP 441
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
V+ G + I IA S + I P
Sbjct: 442 CHVILSGYEKICTIA---SGLPHALLITGKPSAV 472
>gi|293510485|ref|ZP_06669191.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus subsp. aureus M809]
gi|291466849|gb|EFF09369.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus subsp. aureus M809]
Length = 733
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 63/196 (32%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + G+ F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLLITNQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 IFIISVYYIFWLLAKR 442
>gi|282904169|ref|ZP_06312057.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus C160]
gi|282595787|gb|EFC00751.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus C160]
Length = 733
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 63/196 (32%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + G+ F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLLITNQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 IFIISVYYIFWLLAKR 442
>gi|15602727|ref|NP_245799.1| Rec2 [Pasteurella multocida subsp. multocida str. Pm70]
gi|12721172|gb|AAK02946.1| Rec2 [Pasteurella multocida subsp. multocida str. Pm70]
Length = 797
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F +SA+ +Y I + T ++ ++ +
Sbjct: 339 SFWLSVSAVSALIIWYQIFPFSLLHWRGKSLTEGP---WRKCCWFFSLLHLQLGLLWLFT 395
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F I + +AN+L +PI S +++P L A++ +A + I++
Sbjct: 396 PVQLLLFQGISLTSFMANVLVVPIYSVILVPLILFAVITQGAFSSWFLANTVAKQVTILL 455
Query: 158 H--IAHRI 163
+H +
Sbjct: 456 TPLQSHWV 463
>gi|297590869|ref|ZP_06949507.1| competence protein ComEC [Staphylococcus aureus subsp. aureus MN8]
gi|297575755|gb|EFH94471.1| competence protein ComEC [Staphylococcus aureus subsp. aureus MN8]
Length = 733
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 63/196 (32%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + G+ F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLLITNQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 IFIISVYYIFWLLAKR 442
>gi|49483835|ref|YP_041059.1| hypothetical protein SAR1665 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425712|ref|ZP_05602136.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257428373|ref|ZP_05604771.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257431010|ref|ZP_05607390.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257433698|ref|ZP_05610056.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257436612|ref|ZP_05612656.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus subsp. aureus M876]
gi|282905996|ref|ZP_06313851.1| DNA internalization-family competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282911225|ref|ZP_06319027.1| late competence protein ComEC [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914394|ref|ZP_06322180.1| putative competence protein ComEC/Rec2 [Staphylococcus aureus
subsp. aureus M899]
gi|283958351|ref|ZP_06375802.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus A017934/97]
gi|293503468|ref|ZP_06667315.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus subsp. aureus 58-424]
gi|293531025|ref|ZP_06671707.1| putative competence protein ComEC/Rec2 [Staphylococcus aureus
subsp. aureus M1015]
gi|295428165|ref|ZP_06820797.1| DNA internalization-like competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|49241964|emb|CAG40659.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271406|gb|EEV03552.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus subsp. aureus 55/2053]
gi|257275214|gb|EEV06701.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257278440|gb|EEV09076.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257281791|gb|EEV11928.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257283963|gb|EEV14086.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus subsp. aureus M876]
gi|282321575|gb|EFB51900.1| putative competence protein ComEC/Rec2 [Staphylococcus aureus
subsp. aureus M899]
gi|282324920|gb|EFB55230.1| late competence protein ComEC [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282331288|gb|EFB60802.1| DNA internalization-family competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus Btn1260]
gi|283790500|gb|EFC29317.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus A017934/97]
gi|290920293|gb|EFD97359.1| putative competence protein ComEC/Rec2 [Staphylococcus aureus
subsp. aureus M1015]
gi|291095134|gb|EFE25399.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus subsp. aureus 58-424]
gi|295128523|gb|EFG58157.1| DNA internalization-like competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|312437944|gb|ADQ77015.1| competence protein ComEC [Staphylococcus aureus subsp. aureus
TCH60]
gi|315195490|gb|EFU25877.1| hypothetical protein CGSSa00_07465 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 733
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 63/196 (32%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + G+ F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLLITNQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 IFIISVYYIFWLLAKR 442
>gi|238917139|ref|YP_002930656.1| competence protein ComEC [Eubacterium eligens ATCC 27750]
gi|238872499|gb|ACR72209.1| competence protein ComEC [Eubacterium eligens ATCC 27750]
Length = 806
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 12/163 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK-QSFLNEIRANI--GTYGSA 94
F + ++ I + P + KK+ SI + I + G
Sbjct: 339 GFLMSFLAMAGIIFV--KPIFSNEETIMLFFRKKKMVSITEMFIYHNIIDMLITGLCVQI 396
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-- 152
+ ++ I + L+ NI+ IP++S +++ L I+ + +S+ G
Sbjct: 397 ATLPVVLSMSGQIAIISLLLNIVVIPLMSVIMVSGILTGIMGL-ISMKA-AIWTAGAGEY 454
Query: 153 -LDIIIHIAHRISVAHNEFCI-GRIPETSFVT-IVVEFLLMVF 192
LD+ + + S + + G PE + V V + V
Sbjct: 455 ILDLYSWLCEKASGSSGAVIVTGHPPEKAVVLYYVFLIVWCVI 497
>gi|254424121|ref|ZP_05037839.1| Competence protein [Synechococcus sp. PCC 7335]
gi|196191610|gb|EDX86574.1| Competence protein [Synechococcus sp. PCC 7335]
Length = 515
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/197 (11%), Positives = 65/197 (32%), Gaps = 22/197 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L+ ++K +P + L P ++D F ++ +G ++P++I
Sbjct: 325 LATSRKVNPLSGLLLAAVLILLFNPQW-----IWDIGFQLSV--VATLGLILTVPRLIQL 377
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + +F +P Y ++ N + P+
Sbjct: 378 LD-------------WLPVSVAMVLAVPIAAYLWTIPLQLLYFQVLPTYSVLLNGITTPL 424
Query: 122 LSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETS 179
++ + + + AI + + L + + + + I+I + + + I
Sbjct: 425 VTLISMGGFISAIAAIPVPLIGSFIASTLYYPIHILIWVVDQFNQLPGSSLEFTGIEGWH 484
Query: 180 FVTIVVEFLLMVFCKTN 196
V + ++ +
Sbjct: 485 VVVSYLVYMAICIWLRR 501
>gi|188997184|ref|YP_001931435.1| ComEC/Rec2-related protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932251|gb|ACD66881.1| ComEC/Rec2-related protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 439
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 51/161 (31%), Gaps = 26/161 (16%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LF +F + + I + + K + W+K+ +
Sbjct: 300 SLFSVSFQLSFLAVFGIILTFEVFKDL--------ENWQKV------------LISSLFA 339
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD-NIPFGVMAW 151
+ ++ +F + A PI S + P I++L ++ + + +M +
Sbjct: 340 TLFTLPIILYYFGNFSPTTIFA----TPIASLPLYPLLTISVLNLLTGFEISFLVKIMDF 395
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ I I S + G P + I + L +
Sbjct: 396 FTVVFIQIVKFFSSL-GLYFTGFSPSILLIFIYLAILTFIL 435
>gi|226307257|ref|YP_002767217.1| hypothetical protein RER_37700 [Rhodococcus erythropolis PR4]
gi|226186374|dbj|BAH34478.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 786
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/180 (8%), Positives = 56/180 (31%), Gaps = 16/180 (8%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D+ F+ A+ + + W + + +
Sbjct: 345 DWGFALSTTATGALVIIAPVWVDVLRRRGWPRWFSE-------------MTAVSSAAFVV 391
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWGLD 154
++ + V + AN+ P++ + + +IA+ L+ + ++ +
Sbjct: 392 SAPLVGAMAGTFSVVTIAANMAVAPVIGIITVLGAVIALCALICPPIAVFITPLVRPPMG 451
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL--LMVFCKTNIRHIGSIMIGITIIIL 212
+++++ R + + + +V L + R + +++ ++ L
Sbjct: 452 WLLYVSERAAALPGASVVVPPGLIGALIVVGVLLAAALTLWNRISRWVVGVLVLGVVLAL 511
>gi|260886382|ref|ZP_05897645.1| DNA internalization-related competence protein ComEC/Rec2
[Selenomonas sputigena ATCC 35185]
gi|330838850|ref|YP_004413430.1| DNA internalization-related competence protein ComEC/Rec2
[Selenomonas sputigena ATCC 35185]
gi|260863903|gb|EEX78403.1| DNA internalization-related competence protein ComEC/Rec2
[Selenomonas sputigena ATCC 35185]
gi|329746614|gb|AEB99970.1| DNA internalization-related competence protein ComEC/Rec2
[Selenomonas sputigena ATCC 35185]
Length = 798
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/264 (10%), Positives = 73/264 (27%), Gaps = 35/264 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ ++ D + P FD +F + + + Y
Sbjct: 322 LALERESDARRLLALVGMALLFFEPLLA-----FDVSFQLSFAATAGLLYLAP------- 369
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + + +G + L +FH + + LIANI+ +P+
Sbjct: 370 ---PFCERLSTLRFLPRFVVLSLAVTLG--AQLATLPLLAWYFHRLSLSSLIANIIVVPV 424
Query: 122 LSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+ V++ + ++ L I F + L ++ ++V
Sbjct: 425 VELVIVAGLFAGLASFVLPF-LAKIVFLADSLLLGLVYECTRLLAVMPGGEVYLPTLSAP 483
Query: 180 FVTIVVEFLLMVF-----------CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS-- 226
L + R + I + + S ++ +
Sbjct: 484 LALGYFAVLTVFVQPEERREAVFSWCRERRKVIFAAILFAAAAVALWQISRPQEMAVHFI 543
Query: 227 --EKGNLVALVDKNTLISNYSNPP 248
+G+ +V +
Sbjct: 544 DVGQGDAALVVTPHGRALMIDTGG 567
>gi|298694869|gb|ADI98091.1| Late competence protein ComEC, DNA transport [Staphylococcus aureus
subsp. aureus ED133]
Length = 705
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 223 TNYAPSAVRAIIMTTLVLLITKQIKIKGIHLLAFAFIIMFILNPLVVYDIGFQFSFIISF 282
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH I G ++N++ +P SF+
Sbjct: 283 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQIQWVGFLSNLIFVPYYSFI 340
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 341 LFSLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 398
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 399 IFIISVYYIFWLLAKR 414
>gi|332637227|ref|ZP_08416090.1| metallo-beta-lactamase superfamily hydrolase [Weissella cibaria
KACC 11862]
Length = 754
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 53/140 (37%), Gaps = 6/140 (4%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
S L+ H + ++AN++A+P+ +++VIP L+ I L I M+
Sbjct: 359 SVLILPVLLWHTYAWHPISILANLVAMPVFTWLVIPVLLVGIGAAWCGLTPI----MSCC 414
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC--KTNIRHIGSIMIGITII 210
+I I I+ + + V + V + R IG +++ I +
Sbjct: 415 NALINGIQFGIAQMDRVPGELVFGQPPLLLSGVALVGTVSWLLRRRRRTIGLVLLVIYGV 474
Query: 211 ILFTFPYSFSPDLLISEKGN 230
+ + + ++ G
Sbjct: 475 MFLLPRLATGGFVAFADVGQ 494
>gi|283470866|emb|CAQ50077.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus ST398]
Length = 705
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 66/200 (33%), Gaps = 19/200 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM----IYS 61
Y P I L G+ F + I + + +
Sbjct: 223 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAF------VFIIMFILNPLVVYDIGFQF 276
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + + ++Q + I ++ I I +FH + GL++N++ +P
Sbjct: 277 SFIISFFIMLLFPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGLLSNLIFVPY 336
Query: 122 LSFVVIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPE 177
S ++ P ++ + + ++ D ++ + RI +H F + + +
Sbjct: 337 YSIILFPLSILFFITSHFIVGLMPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFND 394
Query: 178 TSFVTIVVE---FLLMVFCK 194
F+ ++ ++ +
Sbjct: 395 WIFIIFIISVYYIFWLLAKR 414
>gi|163848173|ref|YP_001636217.1| ComEC/Rec2-like protein [Chloroflexus aurantiacus J-10-fl]
gi|222526078|ref|YP_002570549.1| ComEC/Rec2-like protein [Chloroflexus sp. Y-400-fl]
gi|163669462|gb|ABY35828.1| ComEC/Rec2-related protein [Chloroflexus aurantiacus J-10-fl]
gi|222449957|gb|ACM54223.1| ComEC/Rec2-related protein [Chloroflexus sp. Y-400-fl]
Length = 504
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 66/200 (33%), Gaps = 18/200 (9%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ ++ +P+ + L P L+D F ++ + + P
Sbjct: 307 TAERQSEPWRLLLAACWLLTLINPQT-----LWDLGFQLSALATAS-LFAFGKP-----V 355
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + + + A + ++ HF + + +ANI+ +P++
Sbjct: 356 DHWLDTVRWPPHPVVDAMREALGATL--AAQVLTLPLMLYHFGNLSLIAPLANIVIVPVV 413
Query: 123 SFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
F ++ G + ++ L L I +A ++ + + R+P F
Sbjct: 414 PFAMLLGGCALLGGLVWLPLGQWLALCAWLPLSWINSVAMLLA--EPAWAVVRLP--VFP 469
Query: 182 TIVVEFLLMVFCKTNIRHIG 201
++ + +V R +
Sbjct: 470 LWLLVVMYVVIASVWWRWVR 489
>gi|322389145|ref|ZP_08062707.1| competence protein [Streptococcus parasanguinis ATCC 903]
gi|321144155|gb|EFX39571.1| competence protein [Streptococcus parasanguinis ATCC 903]
Length = 748
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 67/213 (31%), Gaps = 14/213 (6%)
Query: 55 IPKMIYSSESHNTWTWKKISSIK---QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+PK + ++ + + I ++ + + S L +F +
Sbjct: 323 MPKFLLTAGGVLSCAYAFILTLVDTSSYSGLKKLLVESFWISLGILPLLTYYFSVFQPWS 382
Query: 112 LIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
L L + V++P + +L L++ N F ++ + I +++
Sbjct: 383 LPLTFLFSFLFDLVLLPGLTVLFILSILKPLTIFNSFFLLIEECIRWI----SKLTSLPL 438
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEK 228
F P + +++ L + + R + MI + + + I +
Sbjct: 439 VFGQPTGPALIALFLLLGILYDLRKQKKRRFLLIGMILLIFCWTKHPLENEITMVDI-GQ 497
Query: 229 GNLVALVDKNTLISNYSNPPSFIF---SQWKSA 258
G+ + L D F +W+
Sbjct: 498 GDSIFLRDWKGRTILIDVGGRVTFKSGEKWQER 530
>gi|270486947|ref|ZP_06204021.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis KIM D27]
gi|270335451|gb|EFA46228.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis KIM D27]
Length = 728
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 85/292 (29%), Gaps = 29/292 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNT 67
P+ G+ +S P +F + ++ +F+ P
Sbjct: 311 SPWQVWRWALGLILVSDPLAVLS-----DSFWLSCLAVFSLICWFHLAPVSSRFITGWYG 365
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + I FH I ++ + AN+ A+PI+S +
Sbjct: 366 LVIRWFH-------------LQFGMMLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTV 412
Query: 128 PAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P L+A+ L +L I + + L +++ +++ S
Sbjct: 413 PCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKE-----GWLHTGMASVAIGYGG 467
Query: 187 FLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+L + + R +I + + ++ + L ++++
Sbjct: 468 WLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAI 527
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
Y + + ++ P + + E + + ++ F
Sbjct: 528 IYDTGNHWPTGNMAAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAF 579
>gi|262040988|ref|ZP_06014210.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041682|gb|EEW42731.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 741
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/319 (10%), Positives = 101/319 (31%), Gaps = 31/319 (9%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ + G ++ P L ++ + +++ +
Sbjct: 287 RWTAWQVWLCCLGAILVADPLAVLSQSL-----WLSAFAVAGLIFWFQWLPLPA---GRW 338
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W WK I ++ + + + FH + + + AN+LA+P+++ +
Sbjct: 339 RWPWKTIIALVH---------LQAGVTLLLLPLQLLLFHGVSLTSMAANLLAVPLVTLLA 389
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPETSFVTIVV 185
+P L A+L+ + + I ++ D ++ + + + + + +
Sbjct: 390 VPLILTAMLVHLSGPE-IVESLLWLAADRVLAVLFWGLRRLPDGWLT--LDTRWLWISSL 446
Query: 186 EFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKNTL 240
+LL++ + + RH ++ + + ++ F D ++ L +++++
Sbjct: 447 PWLLVMGWRFQSWRHSPALCLSVLFLLTRPFSRQPPADEWRVTMLDVGQGLAMVIERHGK 506
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
Y P+ W P ++ LQ + E L +
Sbjct: 507 ALLYDTGPA-----WPQGDSGQQVIIPWLRWHHLQLQGIMLSHEHLDHRGGLDSVLQAWP 561
Query: 301 FCVGCHRSDVIVGVLKRKD 319
+ +
Sbjct: 562 QAWVRSPLGWAHHLPCHRG 580
>gi|328955418|ref|YP_004372751.1| DNA internalization-related competence protein ComEC/Rec2
[Coriobacterium glomerans PW2]
gi|328455742|gb|AEB06936.1| DNA internalization-related competence protein ComEC/Rec2
[Coriobacterium glomerans PW2]
Length = 778
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/368 (7%), Positives = 95/368 (25%), Gaps = 21/368 (5%)
Query: 16 TIEGIARLSPPSGPAFPGL-FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+ G+ ++ PG+ ++ F + I F I +
Sbjct: 332 ALSGLMLVTAALVIMTPGIVYELGFQLSVASVLFISIFGRYITCILCRCGLPPLIAE--- 388
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
I + + F I + +A+++ P++ +++ + A
Sbjct: 389 ----------ALAITICAQWATLPLAVPAFGQISLIAPLASLVLAPVMGALLVCGLVAAP 438
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
L ++ + V + I A ++ +P ++
Sbjct: 439 LGALVPVLAPVVFVPQALARVSIFAAQLLAAVPFSSVYATMPPLMAAASCFLACALLAWW 498
Query: 195 ---TNIRHIGSIMIGITIII----LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+ + + + + +T +L +G+ + + D + + +
Sbjct: 499 KDVRRWQLLAVVGLIAVLCAGHVLFWTRAAPACVTVLDVGQGDSILIRDGSAAMLVDAGV 558
Query: 248 PSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHR 307
+ S + + + ++ + +
Sbjct: 559 DDAVCSALVRNNVYRLDAVLITHWDLDHCGGVPYIVSMMPVDRLFVARGASGNVPPELAS 618
Query: 308 SDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPP 367
+D+ V + ++ + SL++ + L + +
Sbjct: 619 ADLPPIVEVSAGDRLRIGAFNGEIVWPREPVGGLENGDSLVVDMRYERDGRRLSVLLTGD 678
Query: 368 SNDNDKVK 375
S + +
Sbjct: 679 SELEQERR 686
>gi|258621374|ref|ZP_05716408.1| Rec2-related protein [Vibrio mimicus VM573]
gi|258586762|gb|EEW11477.1| Rec2-related protein [Vibrio mimicus VM573]
Length = 747
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 84/241 (34%), Gaps = 31/241 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y K+ + K L +I +
Sbjct: 331 SFWMSFLAVAIVLY-------------QLASQGKRKAWWKALLLAQISLV------CLMA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIPFGVMAWGLDI 155
F + + ++ N++ IP S V++PA + + L I + + + + W +
Sbjct: 372 PVTAYFFGGLSITAVLYNLVFIPWFSVVIVPALFLGLALTVTIPTWAELYWPWVDWTF-L 430
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ A + + I +V+ L + + + + ++I+ L+ +
Sbjct: 431 PLDWALKFADVGWVVIPQSIQGLIAALVVLSLLY------RVMSLRACALSLSIVGLWWW 484
Query: 216 PYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
S +P ++ L +++KN Y S+ + +I P + +++
Sbjct: 485 FPSITPFWRMDVLDVGHGLAIVIEKNGHAIVYDTGSSWPGGSYAQNVIEPILQQRGIRRL 544
Query: 273 D 273
D
Sbjct: 545 D 545
>gi|308235146|ref|ZP_07665883.1| ComEC/Rec2-like protein [Gardnerella vaginalis ATCC 14018]
Length = 432
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 54/195 (27%), Gaps = 23/195 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L +++Y A + P +D++F+ I
Sbjct: 219 LMFSRQYQSASALSITVISVLFICPKYA-----WDYSFALSVCATFGIIV---------- 263
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ ++I +I I + +IAN++ P
Sbjct: 264 ----CGMSLRRIFLRYMPSSLASALSITLCAQCFTLPVQILMQPQVSFISVIANLIVAPF 319
Query: 122 LSFVVIPAGLIAILL-MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE---FCIGRIPE 177
+ F I L I S+ I + ++G +I+ + A + + G +
Sbjct: 320 VDFATIFGLLSLICANWSYSISLIFATISSFGTNIMANCAWYLGDLQIGTIPWVNGSLGA 379
Query: 178 TSFVTIVVEFLLMVF 192
L+V
Sbjct: 380 WLIAFAEFAIFLLVL 394
>gi|194017691|ref|ZP_03056301.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
pumilus ATCC 7061]
gi|194010591|gb|EDW20163.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
pumilus ATCC 7061]
Length = 775
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 29/192 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ P + + L+ P + LF+ F + + S + ++ +
Sbjct: 299 KEMKQPSAVVLSATFLFLLAI--HPLY--LFEIGFQLSF--VVTFFILLSTRILSQANSA 352
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
I ++ L+ HF + + N++ +P +
Sbjct: 353 VMQLFL-----------------ISFVAQLASLPVLLYHFQQFSLLSIPLNMIFVPFYTT 395
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISV----AHNEFCIGRIPETSF 180
VV+P L+ LL I+ L V+ LD +I ++H++S I
Sbjct: 396 VVLPLSLLFFLLSIIYL--PLGQVLFQLLDSVIQLSHQLSAHMAVFDGFNLIFMKSTWWH 453
Query: 181 VTIVVEFLLMVF 192
+ + V ++ +
Sbjct: 454 ILLEVSAIVFLL 465
>gi|85711274|ref|ZP_01042333.1| DNA uptake-related membrane-associated competence protein
[Idiomarina baltica OS145]
gi|85694775|gb|EAQ32714.1| DNA uptake-related membrane-associated competence protein
[Idiomarina baltica OS145]
Length = 770
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 61/203 (30%), Gaps = 20/203 (9%)
Query: 29 PAFPGLF-DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
+ PG + D F ++ I +W K +S
Sbjct: 335 VSDPGSWHDIGFWFSILAVTVILL------------CQWSWRNKPSASWVTRIWQTFYLQ 382
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP-- 145
+ + F + + +N+ +PI++ V+P L+ + + D+
Sbjct: 383 LLFLTLMG--PISLALFDGVSLIAPFSNLFVVPIIAIWVLPLTLLGAIAAMCWSDSFAAN 440
Query: 146 -FGVMAWGLDIIIHIAHRISVAHNEFCIGRIP--ETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ + L I + ++ + +P + + LL+ + IGS
Sbjct: 441 LWWLAEQPLIAIQPLLTTLADVPLVWFSSTLPTVTGTIFWLFALALLLPYWLPRYFSIGS 500
Query: 203 IMIGITIIILFTFPYSFSPDLLI 225
++ + D++
Sbjct: 501 AVLAAIASGYYFLERGQKADVMF 523
>gi|323165380|gb|EFZ51167.1| comEC/Rec2-related domain protein [Shigella sonnei 53G]
Length = 340
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 20/156 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + L P L ++A+ ++Y
Sbjct: 169 RQWSGWDVWICCLAAILLMDPVAILSQSL-----WLSAAAVAALIFWYQWFPCP------ 217
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+LAIP+++F+
Sbjct: 218 ---EWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFI 271
Query: 126 VIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIH 158
+P L A+++ L L+ + + L ++
Sbjct: 272 TVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW 307
>gi|154502624|ref|ZP_02039684.1| hypothetical protein RUMGNA_00437 [Ruminococcus gnavus ATCC 29149]
gi|153796816|gb|EDN79236.1| hypothetical protein RUMGNA_00437 [Ruminococcus gnavus ATCC 29149]
Length = 529
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 63/233 (27%), Gaps = 37/233 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L D + + + + Y + K L +A++
Sbjct: 84 LRDAGYLLSFGAVLGMAAVYP--------------LMMRQGKTKSKILQSFQASLAVNLV 129
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ + P Y L+ N++ IP++S V+ L + L + + F +
Sbjct: 130 LFPVMLSFYY--EFPPYSLLLNLVIIPLMSVVLGAGLLGSFLCLFFKPAGGVVFLLC--- 184
Query: 153 LDIIIHIAHRISVAH-----NEFCIGRIPETSFVTIVVEFLLMVF-CKTN---------- 196
I+++ + G+ + V LL+
Sbjct: 185 -RGILNLYEWSCNLSMKLPFSRIVTGKPEVSWIVLYYAVLLLVCLYWMLRKEKTGKTCFA 243
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ + I + F +L +G+ + L N S
Sbjct: 244 WGMLAAAGICLAASGQMKHHGVFQATMLDVGQGDGIFLRTPNGRTCFVDGGSS 296
>gi|288936289|ref|YP_003440348.1| DNA internalization-related competence protein ComEC/Rec2
[Klebsiella variicola At-22]
gi|288890998|gb|ADC59316.1| DNA internalization-related competence protein ComEC/Rec2
[Klebsiella variicola At-22]
Length = 754
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/321 (10%), Positives = 103/321 (32%), Gaps = 35/321 (10%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ + G ++ P L ++ + +++ +
Sbjct: 300 RWTAWQVWLCCLGAILVTDPLAVLSQSL-----WLSAFAVAGLIFWFQWVPLPA---GRW 351
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W WK + ++ + + + FH + + + AN+LA+P+++ +
Sbjct: 352 RWPWKTLFALVH---------LQAGVTLLLMPLQLLLFHGVSLTSMAANLLAVPLVTLLA 402
Query: 127 IPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+P L A+LL + ++++ + L ++ + + +
Sbjct: 403 VPLILGAMLLHLTGPGMVESLLWLAADRVLALLFWGLRH---LPDGWL--PLDARWLWIS 457
Query: 184 VVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKN 238
+ +LL++ + + RH ++ + + ++++ F F D ++ L +++++
Sbjct: 458 SLPWLLVMGWRFQSWRHFPALCLSVLLLLMRPFWRPFPADEWRVTMLDVGQGLAMVIERH 517
Query: 239 TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIK 298
Y P+ W P ++ LQ + E L +
Sbjct: 518 GKALLYDTGPA-----WPQGDSGQQVIIPWLRWHHLQLQGIVLSHEHLDHRGGLNSVRQA 572
Query: 299 KSFCVGCHRSDVIVGVLKRKD 319
+ +
Sbjct: 573 WPQAWVRSPLGWTRHLPCHRG 593
>gi|262171154|ref|ZP_06038832.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio mimicus MB-451]
gi|261892230|gb|EEY38216.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio mimicus MB-451]
Length = 747
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 84/241 (34%), Gaps = 31/241 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y K+ + K L +I +
Sbjct: 331 SFWMSFLAVAIVLY-------------QLASQGKRKAWWKALLLAQISLV------CLMA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIPFGVMAWGLDI 155
F + + ++ N++ IP S V++PA + + L I + + + + W +
Sbjct: 372 PVTAYFFGGLSITAVLYNLVFIPWFSVVIVPALFLGLALTVTIPTWAELYWPWVDWTF-L 430
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ A + + I +V+ L + + + + ++I+ L+ +
Sbjct: 431 PLDWALQFADVGWLVIPQSIQGLIAALVVLSLLY------RVMSLRACALSLSIVGLWWW 484
Query: 216 PYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
S +P ++ L ++++N Y S+ + +I P + +++
Sbjct: 485 FPSSAPLWRMDVLDVGHGLAIVIEQNDRAIVYDTGSSWPGGSYAKNVIEPILQQRGIRRL 544
Query: 273 D 273
D
Sbjct: 545 D 545
>gi|149182758|ref|ZP_01861222.1| ComE operon protein 3 [Bacillus sp. SG-1]
gi|148849524|gb|EDL63710.1| ComE operon protein 3 [Bacillus sp. SG-1]
Length = 765
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/162 (10%), Positives = 51/162 (31%), Gaps = 27/162 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + + S +K + +
Sbjct: 330 GFQLSFLVSFSLVLS-------------SRHILGADNQKWK---------LIFMVTAVCQ 367
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAW 151
+ L+ HF+ + G + N + +P + V++P L++ +++ + F + W
Sbjct: 368 ICSIPVLLWHFYEFSLIGFVVNAIYVPYFTMVLLPLALLSFFSLLIFSPATHFLFPFLKW 427
Query: 152 GLDIIIHIAHRISVAHNEF---CIGRIPETSFVTIVVEFLLM 190
+ + ++ ++ +P + + F +
Sbjct: 428 SVIFVDDVSGWLNSLPYITFTAGKPALPMAFLYCVTIGFCFI 469
>gi|315180604|gb|ADT87518.1| ComEC/rec2 family protein [Vibrio furnissii NCTC 11218]
Length = 643
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/260 (10%), Positives = 76/260 (29%), Gaps = 24/260 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + ++ + Y ++ S + W
Sbjct: 227 MSFWLSFLAVAVVLY-----QLASCSSTQRGWRQ--------------LVMTQCTLVLLM 267
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F + + N++ IP S +++P + ++L L + +D+
Sbjct: 268 TPISALFFSGFSLSSALYNLVFIPWFSVMIVPLLFLGLVLTSLFEQVDWIWTL---IDLS 324
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTF 215
+ + T+FV ++ + I +++ + + +
Sbjct: 325 FWPLSQALTLSESSWVAVSHATTFVLCAGGIGWVLRPLLSRDARIAVVLLALGMWAFNSP 384
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
+ D+L L L+++ + Y + + +L+ P V + D
Sbjct: 385 KDRWRIDVL-DVGHGLAVLIERQQRVLLYDTGSGWPDGSYVRSLVVPLLHQRGVHQLDGL 443
Query: 276 EKNQSSLKEILRSMQPRKFL 295
+ +++L
Sbjct: 444 IISHMDSDHAGGLADAQQWL 463
>gi|291538272|emb|CBL11383.1| DNA internalization-related competence protein ComEC/Rec2
[Roseburia intestinalis XB6B4]
Length = 813
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 27/154 (17%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D F + + + W K + S Q + G
Sbjct: 339 ALYDAGFQLSFIAVLGVV-----------------WAGKIVQSAYQRHAVLQKIGTGFVL 381
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGLIAILLMI----LSLDNIP 145
+F+ IPVY ++ N+L +P + V+ I GL+ +M + + +P
Sbjct: 382 QLVILPVTAWYFYEIPVYAMLLNLLVLPFVGIVLASGIAGGLLGCAVMPQAVLVHIVLLP 441
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
V+ G + I IA S + I P
Sbjct: 442 CHVILSGYEKICTIA---SGLPHALLITGKPSAV 472
>gi|322384963|ref|ZP_08058619.1| DNA channel for uptake in competent cells-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321150260|gb|EFX43767.1| DNA channel for uptake in competent cells-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 619
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 52/187 (27%), Gaps = 23/187 (12%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+ D A + I + P D F + + +
Sbjct: 240 RSDALHAVALVAWIMLVWEPEYLL-----DIGFQLSFLVTIGLIVLVPRVSTLLPIP--- 291
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ + A + I +F+ + +AN L +P+ S +
Sbjct: 292 ------------AVSLRNTIAMTFVAQAVSFPVTIYYFNQFSLLSWLANALLVPVFSMIS 339
Query: 127 IPAGLIAILLMI--LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSFVTI 183
PAGL A+ I + L I V G + +++ I P +
Sbjct: 340 FPAGLAALAAGIIWIPLGKIAAVVAEIGNWLAFKTIAFLTMTGGWVTIWPSPSLWWIMAY 399
Query: 184 VVEFLLM 190
+L+
Sbjct: 400 SALAILL 406
>gi|302344442|ref|YP_003808971.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfarculus baarsii DSM 2075]
gi|301641055|gb|ADK86377.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfarculus baarsii DSM 2075]
Length = 794
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/254 (14%), Positives = 75/254 (29%), Gaps = 20/254 (7%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++YDP I P P D +F + + AI + +
Sbjct: 313 DRRYDPLGGLALAALIIVGLWPEAPL-----DLSFQLSFLAVGAILLAAAPLARWARALG 367
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + ++HFH P+ L AN L IP+++
Sbjct: 368 RRSGRMGWALG-----GLAGWLCLSAVVGLAVMPLGLRHFHVAPLLYLPANALLIPLVAM 422
Query: 125 VVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFV 181
+ +P L L +L + + + D IA + P V
Sbjct: 423 LALPLALAGAGLGLLWPAAGLWLWRLALLPADWACDIALAWAAMPWAAWFTAGPSVEVLV 482
Query: 182 TIVVEFLLMVFCKTNIR-HIGSIMIGITIIILFTFPYSFSPD------LLISEKGNLVAL 234
+ L M+ + R +G + +I+ + +PD +L +G+ +
Sbjct: 483 LLHGAALAMIALRGRGRLWLGGALSVAVLIVGALQAWPPAPDGKLTVWILDVGQGSSAVI 542
Query: 235 VDKNTLISNYSNPP 248
+
Sbjct: 543 RTPLGRVLVVDGGG 556
>gi|258626801|ref|ZP_05721608.1| Rec2-related protein [Vibrio mimicus VM603]
gi|258580848|gb|EEW05790.1| Rec2-related protein [Vibrio mimicus VM603]
Length = 747
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 84/241 (34%), Gaps = 31/241 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y K+ + K L +I +
Sbjct: 331 SFWMSFLAVAIVLY-------------QLASQGKRKAWWKALLLAQISLV------CLMA 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIPFGVMAWGLDI 155
F + + ++ N++ IP S V++PA + + L I + + + + W +
Sbjct: 372 PVTAYFFGGLSITAVLYNLVFIPWFSVVIVPALFLGLALTVTIPTWAELYWPWVDWTF-L 430
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ A + + I +V+ L + + + + ++I+ L+ +
Sbjct: 431 PLDWALKFADVGWVVIPQSIQGLIAALVVLSLLY------RVMSLRACALSLSIVGLWWW 484
Query: 216 PYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
S +P ++ L +++KN Y S+ + +I P + +++
Sbjct: 485 FPSITPFWRMDVLDVGHGLAIVIEKNGHAIVYDTGSSWPGGSYAKNVIEPILQQRGIRRL 544
Query: 273 D 273
D
Sbjct: 545 D 545
>gi|254416319|ref|ZP_05030073.1| hypothetical protein MC7420_5155 [Microcoleus chthonoplastes PCC
7420]
gi|196177001|gb|EDX72011.1| hypothetical protein MC7420_5155 [Microcoleus chthonoplastes PCC
7420]
Length = 455
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 82/256 (32%), Gaps = 24/256 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + K + + I +
Sbjct: 36 IWDLGFQLSFLATLGLLVTVPP-------------LVKNLDWLPSVIAALI--AVPLAAL 80
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG-VMAWG 152
+ F I Y ++ANI+ P++S + + L A++ +I L ++ +
Sbjct: 81 LWTLPLQLYVFGMIAPYSVVANIIGTPLISLISLGGFLSALVALISPLAGSAIAGLLYYP 140
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITII 210
L ++ + ++ +G I + + + + +R I +I +TII
Sbjct: 141 LQGLLELVRFLNALPASSVALGTISLMQLLLLYGLIGITCISSRVQMRGIFVGVIALTII 200
Query: 211 ILFTFPYS---FSPDLLISEKGNLVALVDKNTLISNYSN---PPSFIFSQWKSALITPFH 264
L + F +L++++ ++ + D+ + S +F +
Sbjct: 201 ALPIWQTRLEQFQVTVLVADQEQVLVIQDQGQVTLVNSGETDTANFTILPFLQKQGVNQV 260
Query: 265 EAPHVQKEDLQEKNQS 280
+ + ++
Sbjct: 261 DWAVAVDSQPRFRSGW 276
>gi|313895594|ref|ZP_07829150.1| ComEC/Rec2-like protein [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975720|gb|EFR41179.1| ComEC/Rec2-like protein [Selenomonas sp. oral taxon 137 str. F0430]
Length = 479
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 53/165 (32%), Gaps = 16/165 (9%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
F +F + + + + P + + + + + +I
Sbjct: 288 FHISFQLSFLATAGLLFI--APILFQRMKGISVFAAGSL-------------SITMSAQL 332
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ L +F+ + + L++N + +PI+ ++I L I I+ L L
Sbjct: 333 ATLPMLAWYFNQVSLSSLLSNFIVVPIVDIIIIVGLLGGITAWIIPLAGKVVFAFDSILL 392
Query: 155 II-IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
I + ++ PE LL++F +R
Sbjct: 393 AISFELTRFMAALPASKIFVPTPEVGVGCAYYTLLLLIFAPQELR 437
>gi|78212357|ref|YP_381136.1| ComEC/Rec2-related protein [Synechococcus sp. CC9605]
gi|78196816|gb|ABB34581.1| ComEC/Rec2-related protein [Synechococcus sp. CC9605]
Length = 591
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/234 (14%), Positives = 71/234 (30%), Gaps = 20/234 (8%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
T+ G+ L P + F + + + + W +
Sbjct: 231 VVLTLSGMLLLRPAWALS------IGFQLSAAATAGLILTAPRLER-----AVQAWLPDR 279
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+ +I + HF +P+Y L+AN+L P+L+ + + A L
Sbjct: 280 CQGL------AAACSIPLAALVWTLPLQLLHFGAMPLYALVANLLVAPLLAPLTLLAMLS 333
Query: 133 AILLM--ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFVTIVVEFLL 189
A+L++ ++ + + ++I +A IS + GR E V+ L
Sbjct: 334 ALLVLVGPPAVLPLLLWPVHQLTGLVITMASWISHWPGAQLLTGRPQEWVIALFVLGLLP 393
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
R S++ + + + G L +
Sbjct: 394 WWLGAGPCRRCWSLIPLAIALFAHGLLQLGDGLVAVERFGRHWLLARHRGRAAL 447
>gi|167563338|ref|ZP_02356254.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia oklahomensis EO147]
Length = 268
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 60/193 (31%), Gaps = 28/193 (14%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS--- 62
+ P G L P PG F + ++AI + S +
Sbjct: 67 RSLAPSSVLAAALGCVLLVDPWAVTAPG-----FWLSFGAVAAILFVSSGRSAARDAREA 121
Query: 63 ----------ESHNTWTWKKISSIKQSFLNEIRANI---------GTYGSASASIFLIKH 103
+ + + + ++ + + + + + +
Sbjct: 122 NDGRGARVAIDGGDGVPPSRAARLRTACARAMTRLARRVRDAARAQYAVTIALAPLTVLW 181
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F IP+ G +AN AIP + +V P L ++L LD I F + ++ +
Sbjct: 182 FAQIPLAGPLANAFAIPWVGSLVTPTVLAGVVL-PAPLDAIAFAFAHALVATLMRLLEAT 240
Query: 164 SVAHNEFCIGRIP 176
+ A + +P
Sbjct: 241 AGAGRTVWMLPMP 253
>gi|283138919|gb|ADB12522.1| ComEC/Rec2 [uncultured bacterium 9F08]
Length = 765
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 68/214 (31%), Gaps = 22/214 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + ++ I Y S W W ++ + +A
Sbjct: 348 GFWLSFAAVAWILYGMSGRLTAGGLW----WRWGRVQFLV---------------AAGLL 388
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
L+ F + +AN++A+P +S +V+P L+ ++L+ +A L +
Sbjct: 389 PLLLLFFQQGSLSSPLANLIAVPWVSLLVVPLTLLGVVLLWWPPLGTALLGLAAQLLQWL 448
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFP 216
+ G + + + + +R G +++ ++ P
Sbjct: 449 WPLLQWLSEAIPLLPGAAAGWTLLPALAGLAWLFAPHGWPLRPAGIVLLLPLLLWQPPLP 508
Query: 217 YS--FSPDLLISEKGNLVALVDKNTLISNYSNPP 248
LL +G + ++ L+ S P
Sbjct: 509 QPGEARFTLLDVGQGLAAVVQTRHHLLVFDSGPR 542
>gi|283784739|ref|YP_003364604.1| competence-related protein [Citrobacter rodentium ICC168]
gi|282948193|emb|CBG87760.1| putative competence-related protein [Citrobacter rodentium ICC168]
Length = 754
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 86/281 (30%), Gaps = 35/281 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + P L ++A+ ++Y
Sbjct: 299 RQWSGWSVWCCCLAAIVIVDPVAILSQSL-----WLSAFAVAALLFWYQWFPCPGWPLP- 352
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ L ++ + I FH + + +AN+ A+P+++FV
Sbjct: 353 -----------RAGRLLLQLIHLQLGITLLLLPLQIALFHGVSLTSFMANLFAVPLVTFV 401
Query: 126 VIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L ++ I +++ + + L I+ + + + +
Sbjct: 402 SVPLILAGMVAHITGPLVVESGLWFLADRSLAILFW---GLEGLPHGWINVDVRWQWLTI 458
Query: 183 IVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLL----ISEKGNLVALVDK 237
+LL++ + + R + + + +++ + D + L ++ +
Sbjct: 459 AP--WLLLIGWRFSAWRTAPGLCLALLVLLSWPLWRPQRSDAWQVHMLDVGQGLAMVIAR 516
Query: 238 NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKN 278
N Y P W P ++ DLQ +
Sbjct: 517 NGKALLYDTGP-----AWPEGDSAQQTIIPWLRWHDLQPEG 552
>gi|199598190|ref|ZP_03211612.1| Predicted hydrolase (metallo-beta-lactamase superfamily) protein
[Lactobacillus rhamnosus HN001]
gi|258508330|ref|YP_003171081.1| metallo-beta-lactamase superfamily hydrolase protein [Lactobacillus
rhamnosus GG]
gi|199590951|gb|EDY99035.1| Predicted hydrolase (metallo-beta-lactamase superfamily) protein
[Lactobacillus rhamnosus HN001]
gi|257148257|emb|CAR87230.1| Hydrolase (Metallo-beta-lactamase superfamily) protein
[Lactobacillus rhamnosus GG]
gi|259649646|dbj|BAI41808.1| putative hydrolase [Lactobacillus rhamnosus GG]
Length = 734
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 55/144 (38%), Gaps = 9/144 (6%)
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ H + + N L +PI +++P + A+L+ L + +
Sbjct: 347 LGGMPVIAWHTFSFNLLTVFFNWLLMPIFELIIMPGLVFALLMPHAGLTYLFNDALQLLE 406
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
I+I ++H + IG P V V +L++ + + +G +++
Sbjct: 407 TILIRLSH----LPGQIIIGAFPSWLAVLGVFVMMLVLTWQCW-----PVAVGWFVVLAL 457
Query: 214 TFPYSFSPDLLISEKGNLVALVDK 237
Y + +++ + G A++ +
Sbjct: 458 WSWYQPNYRVVMFDVGQGDAILIE 481
>gi|304312930|ref|YP_003812528.1| Predicted internalization-related competence protein ComEC/Rec2
[gamma proteobacterium HdN1]
gi|301798663|emb|CBL46895.1| Predicted internalization-related competence protein ComEC/Rec2
[gamma proteobacterium HdN1]
Length = 773
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 66/243 (27%), Gaps = 34/243 (13%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+FD + ++ I + + I
Sbjct: 368 AIFDRGAWLSFFAVAIILWLLQG-------------------RLWPLGAVRAWFLIQGGI 408
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI--LLMILSLDNIPFGVMA 150
L F P +AN +AIP+L ++V+PA L + L+++ ++
Sbjct: 409 FIGLIPLLAYAFGGFPWISPVANAVAIPLLGYLVVPAALASTFSLIVMPAVSPYILKPSL 468
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRI------PETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
W D ++ + + + VV L ++ + + +
Sbjct: 469 WLADCLMWFLGWMERWGGAGYRVPMWSNPTQMALACSLAVVATLWVLAPRGAPGKWIATV 528
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS-------NYSNPPSFIFSQWKS 257
+ + + + F P + + + +++ S I W
Sbjct: 529 MVLPVALGPGFFPRALPAFEWRREHAAIGFMIEDSAHLWWVFQAGLSSRTRQPILQDWLR 588
Query: 258 ALI 260
Sbjct: 589 RTG 591
>gi|282883165|ref|ZP_06291764.1| DNA internalization-related competence protein ComEC/Rec2
[Peptoniphilus lacrimalis 315-B]
gi|281296977|gb|EFA89474.1| DNA internalization-related competence protein ComEC/Rec2
[Peptoniphilus lacrimalis 315-B]
Length = 733
Score = 49.8 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 31/161 (19%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIY 60
L+I +K I G+ L P LF +F Y + IG FY P++I
Sbjct: 274 LNIDRKE-----ILHITGLIML-----LINPYSLFSLSFLMSYGAV--IGIFYIYPRLII 321
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + +SF+ + + + +F + + +AN++ IP
Sbjct: 322 KCPKK--------NFVVESFVLTFSVLLVIFPIINT------YFSGVNIIVFLANLIIIP 367
Query: 121 ILSFVVIPAGLI--AILLMILSLDNIPFGVMAWGLDIIIHI 159
+ S V+I + + + +D + + WGL+ ++ +
Sbjct: 368 LYSLVIILGYFLSIGFSFLSVFIDILFKSI--WGLENLLMV 406
>gi|119357519|ref|YP_912163.1| ComEC/Rec2-related protein [Chlorobium phaeobacteroides DSM 266]
gi|119354868|gb|ABL65739.1| ComEC/Rec2-related protein [Chlorobium phaeobacteroides DSM 266]
Length = 733
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/327 (10%), Positives = 96/327 (29%), Gaps = 21/327 (6%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
++ +K + + I P PG F + AI Y + Y S
Sbjct: 336 TLGRKAFAVNSLAASDVIILFIDPLDLFNPG-----FLMTNAAVLAILLVYP---LFYGS 387
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ W++I + S + +F + L+AN+ +
Sbjct: 388 DKEEEGVWRRIWRF-----LLSSFFVSLAAIIGVSPVIAYYFGTFSLVSLVANLPVVLFS 442
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII-IHIAHRISVAHNEFC---IGRIPET 178
+ ++ + ++ ++ F + + + + A S I
Sbjct: 443 TLLMYALMPMLLVNLVSGYLASYFAMSGYLFAWLTLQSALFFSKLPFASIELKPDMIEVA 502
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP----YSFSPDLLISEKGNLVAL 234
+ T++ ++ KT R ++++G+ + ++F + K V
Sbjct: 503 IYYTVLTVAAWYLYKKTWGRLAITLLLGLNLFFWYSFLSAGEQGRGVVTVNLGKNLAVLF 562
Query: 235 VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
+ + S + + P + + + + R ++ ++
Sbjct: 563 STHGETVVIDTGTRSRDVERVMRQVSEYRLAEPVAAVQFFSPDSLVGMVPVKRHLRQQEN 622
Query: 295 LCIKKSFCVGCHRSDVIVGVLKRKDMI 321
S + V+ + + ++
Sbjct: 623 SLALASMVIVRPEEKVLKLWSRERSLL 649
>gi|299769098|ref|YP_003731124.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter sp. DR1]
gi|298699186|gb|ADI89751.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter sp. DR1]
Length = 810
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 70/241 (29%), Gaps = 14/241 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
PF + L P G F Y + IY +
Sbjct: 350 PFSLLVYSASLLLLFDPFSVLSAG-----FWLSYGSCFILL-------RIYQTIVQAPNL 397
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
K L + + ++ F I + NI+A+P+L V++P
Sbjct: 398 ASLSLLSKIILLTKNLIESQGKIYIALCPLMLIFFQQISWVAPLTNIIAVPLLGGVIVPL 457
Query: 130 GLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
+ A + ++ L N F L +++ + + + + +
Sbjct: 458 NIFAACVWLIFNSLGNALFQFNDILLSMVLTCFSLLEKLSLPLQGFSLTPLALIGLSCAI 517
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+++ + + S++ + ++I +++ +G + L +
Sbjct: 518 IILFLPRGVLPKSWSLICCLPLLIPNKTSQQIQLNIIDVGQGQAIFLQHPEQTWLIDTGG 577
Query: 248 P 248
Sbjct: 578 S 578
>gi|229552127|ref|ZP_04440852.1| possible competence protein EC [Lactobacillus rhamnosus LMS2-1]
gi|258539540|ref|YP_003174039.1| hydrolase (Metallo-beta-lactamase superfamily) protein
[Lactobacillus rhamnosus Lc 705]
gi|229314560|gb|EEN80533.1| possible competence protein EC [Lactobacillus rhamnosus LMS2-1]
gi|257151216|emb|CAR90188.1| Hydrolase (Metallo-beta-lactamase superfamily) protein
[Lactobacillus rhamnosus Lc 705]
Length = 734
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 55/144 (38%), Gaps = 9/144 (6%)
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ H + + N L +PI ++IP + A+L+ L + +
Sbjct: 347 LGGMPVIAWHTFSFNLLTVFFNWLLMPIFELIIIPGLVFALLMPHAGLTYLFNDALQLLE 406
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
I+I ++H + IG P V V +L++ + + +G +++
Sbjct: 407 TILIRLSH----LPGQIIIGAFPSWLAVLGVFAMMLVLTWQCW-----PVAVGWFVVLAL 457
Query: 214 TFPYSFSPDLLISEKGNLVALVDK 237
Y + +++ + G A++ +
Sbjct: 458 WSWYQPNYRVVMFDVGQGDAILIE 481
>gi|291519639|emb|CBK74860.1| ComEC/Rec2-related protein [Butyrivibrio fibrisolvens 16/4]
Length = 659
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/277 (11%), Positives = 91/277 (32%), Gaps = 52/277 (18%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP---------KMIYSSESHN 66
+ L G F F+FS+ YF +P K+I + +
Sbjct: 160 ALMADVLLFDNPLYIRNGSFIFSFSAVIG-----IYFIVLPLNTAYTNHCKIIKKANKSH 214
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSA--SASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ + + + + I ++ + + + +H P+Y L+ NI+ +P++
Sbjct: 215 EHFIEEKAPLGRRIIQYIIRSLIFSLGMYAAMLPIVTQLYHQTPLYSLLLNIIVLPLMPV 274
Query: 125 VV---IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSF 180
V+ + AG++ + M ++ + + + ++ ++ +G
Sbjct: 275 VIGVGLVAGVMGLFFMPIAEE--LLYICHIVIYFYELLSSFVNKLPLAEIIVGHKSVWIV 332
Query: 181 VTIVVEFLL-------MVFCKT-----NIRHIG------------SIMIGITIIILFTFP 216
+ + +V K + +G +++ + + +++ P
Sbjct: 333 AAYYLILVFVIHGMDYLVKWKRGLEEKRYKSLGKTSSVIFGGLLGKVVLLLFMCLIWVAP 392
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFS 253
++ I + G + + + + F
Sbjct: 393 TRGKFEIDILDVGQ------GDGIFIDSGDGIRFFID 423
>gi|196248982|ref|ZP_03147682.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. G11MC16]
gi|196211858|gb|EDY06617.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. G11MC16]
Length = 748
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/234 (10%), Positives = 69/234 (29%), Gaps = 32/234 (13%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D F + + + + +
Sbjct: 320 MLWDVGFQLSFAVTFVLLVHFPA--------------------LAARSMIGRLFETALAA 359
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+A L+ HF+ I ++ + N+L +P+ SFV++P + L + +
Sbjct: 360 QLAALPILLYHFYEISIWSVGLNVLFVPLYSFVILPLAFVVAAL-PFP---PLVWLFSCL 415
Query: 153 LDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+++ ++ S +GR V ++ + + + ++
Sbjct: 416 IELTNNVVRFFSVDHPLTIVLGRPEPWCLAVYVAAIVVALLLWERGQLFRGLAAVAMAMV 475
Query: 212 LFTFPYSFSPDLLIS----EKGNLVALVDKNT---LISNYSNPPSFIFSQWKSA 258
L P ++ +G+ + + + + + P +W+
Sbjct: 476 LQLVSPYVDPKGEVTVLDVGQGDCLYIELPHRKAIYLIDTGGTPKIKGERWRER 529
>gi|332975693|gb|EGK12577.1| DNA internalization-related competence protein ComEC/Rec2
[Desmospora sp. 8437]
Length = 484
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 17/142 (11%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + A+ + W + + + + ++
Sbjct: 349 GFQLSFVVTGALLVATGPLSRRIPTP------WPRFNQL---------TAVTLIAEVASF 393
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
LI HFH + N + +P+++ +VIP G++++ + + + + W ++
Sbjct: 394 PLLIYHFHEFSILSFAVNGIVVPVMTALVIPLGMLSLGMGLFHVSFGFWPA--WAASKLL 451
Query: 158 HIAHRISVAHNEFCIGRIPETS 179
+ + + RIP
Sbjct: 452 SGVESLLSFPASWTLFRIPWAP 473
>gi|285018588|ref|YP_003376299.1| competence-related DNA-transformation transporter [Xanthomonas
albilineans GPE PC73]
gi|283473806|emb|CBE70794.1| putative competence-related dna-transformation transporter protein
[Xanthomonas albilineans]
Length = 849
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 70/235 (29%), Gaps = 33/235 (14%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
A + ++ P G F + G++ + + + + W K
Sbjct: 351 DALALAAIVMLVADPLAVLSAG-----FWLSFFGVAWLVWCMPK--------AGSGWRDK 397
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
+ + + F G +AN+LAIP S VV+P L
Sbjct: 398 LREFL----------SAQGVATLGLLPLSTMLFGQASAVGPLANLLAIPWWSLVVVPLAL 447
Query: 132 IAILLMI--LSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFL 188
+ L + + A+ D+ + + + + + + + ++
Sbjct: 448 LGTALDTVHVGAGIWVWRAAAFCFDLTWPVFTMLGESRFALWWLPEARDWALPLALLGAF 507
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
++ + ++ ++L+ + +L + LV + L
Sbjct: 508 WLLLPR-------AVPGKPLAVLLWLPLFWPPLELPAPGEVELVMIDVGQGLSVL 555
>gi|294675540|ref|YP_003576156.1| ComEC/Rec2-like protein [Prevotella ruminicola 23]
gi|294471886|gb|ADE81275.1| ComEC/Rec2-like protein [Prevotella ruminicola 23]
Length = 398
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 18/177 (10%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ A L PA+ LFD F + + AI F + ++S + + W ++
Sbjct: 223 VLAFTAFLMLMWNPAW--LFDVGFQMSFMAVWAILLFVPLFTSVFSDQYYMEHPW--VAK 278
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ I A +G + + +F L+ N L +P +I IA+L
Sbjct: 279 VWGMVAVSIAAQLG------VAPLIAYYFGQFSTCFLLTNFLVVPAA--FIILCLSIAVL 330
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
L ++ + ++ + + I+ IG + T +++ L++
Sbjct: 331 LFP-----PLAYLLLYIVNGLNASLNTIATFPGA-SIGNLHPTILQVVLIYVLIVCC 381
>gi|86134292|ref|ZP_01052874.1| competence protein [Polaribacter sp. MED152]
gi|85821155|gb|EAQ42302.1| competence protein [Polaribacter sp. MED152]
Length = 671
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 25/88 (28%), Gaps = 12/88 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L D F Y + I + W+ + + +
Sbjct: 344 LLDVGFQMSYLAVFGIVILQPKFYKL----------WQPKNILFDKLWQ--LTTVSLAAQ 391
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPI 121
+ +FH P +++N++ +P
Sbjct: 392 IGVLPLSLFYFHQFPGLFILSNLIIVPF 419
>gi|167470894|ref|ZP_02335598.1| hypothetical protein YpesF_24202 [Yersinia pestis FV-1]
Length = 702
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/292 (11%), Positives = 85/292 (29%), Gaps = 29/292 (9%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG-YFYSIPKMIYSSESHNT 67
P+ G+ +S P +F + ++ +F+ P
Sbjct: 311 SPWQVWRWALGLILVSDPLAVLS-----DSFWLSCLAVFSLICWFHLAPVSSRFITGWYG 365
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + I FH I ++ + AN+ A+PI+S +
Sbjct: 366 LVIRWFH-------------LQFGMMLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTV 412
Query: 128 PAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
P L+A+ L +L I + + L +++ +++ S
Sbjct: 413 PCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKE-----GWLHTGMASVAIGYGG 467
Query: 187 FLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLIS 242
+L + + R +I + + ++ + L ++++
Sbjct: 468 WLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAI 527
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
Y + + ++ P + + E + + ++ F
Sbjct: 528 IYDTGNHWPTGNMAAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAF 579
>gi|253733161|ref|ZP_04867326.1| competence protein ComEC [Staphylococcus aureus subsp. aureus
TCH130]
gi|253728917|gb|EES97646.1| competence protein ComEC [Staphylococcus aureus subsp. aureus
TCH130]
Length = 726
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 61/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLVITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 419
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 420 VFIISVYYIFWLLAKR 435
>gi|297588464|ref|ZP_06947107.1| integral membrane protein [Finegoldia magna ATCC 53516]
gi|297573837|gb|EFH92558.1| integral membrane protein [Finegoldia magna ATCC 53516]
Length = 768
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 21/126 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + I Y Y K Q+ + +
Sbjct: 309 LFDVGFIFSFLATFTILYLYPKFKK-------------------QNSKLRNYLMLSSLVY 349
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ F+ +I N + +PI + ++ + + LL+ S + + ++ + L
Sbjct: 350 IILLPIQLRFFNEFTFGFIIGNTIILPIFTLIIQLSAFV--LLIPNSFNYVFVQIIKFCL 407
Query: 154 DIIIHI 159
II +I
Sbjct: 408 KIINYI 413
>gi|88195397|ref|YP_500201.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|87202955|gb|ABD30765.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus NCTC 8325]
Length = 715
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 61/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 233 TNYAPSAVRAIIMTTLVLVITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 292
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 293 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 350
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 351 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 408
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 409 VFIISVYYIFWLLAKR 424
>gi|329728434|gb|EGG64871.1| DNA internalization competence protein ComEC/Rec2-like protein
[Staphylococcus aureus subsp. aureus 21189]
Length = 726
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 61/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLVITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 419
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 420 VFIISVYYIFWLLAKR 435
>gi|320103931|ref|YP_004179522.1| ComEC/Rec2-like protein [Isosphaera pallida ATCC 43644]
gi|319751213|gb|ADV62973.1| ComEC/Rec2-related protein [Isosphaera pallida ATCC 43644]
Length = 1320
Score = 49.4 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 85/289 (29%), Gaps = 45/289 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ P A + P G +F + + + + +
Sbjct: 398 DRPGRPDTALALAALVTIGLNPWNVFHVG-CQLSFLAVAALLWGVPAWRDRHAGPAAGSQ 456
Query: 65 HNTWT-----------------WKKISSIKQSFLNEIRANIGTYGSAS------ASIFLI 101
N+ K++ S K + + I IG S + ++
Sbjct: 457 SNSIIPHPRETPSEALDRLERQLKRLGSRKAALQDRIATTIGQAIGVSITAWIFTAPLVV 516
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGL-IAILLMILSLDNIPFGVMAWGLDIIIHIA 160
F+ + G+ N+ +P+ V AG +++ + +L ++ V LD++I +A
Sbjct: 517 DRFNLVTPIGIPLNLPMVPLSGVAVASAGATLSLGAIHPALGDLAGMVCRVSLDLLIWLA 576
Query: 161 HRISVAHNEFCIGRIPE--TSFVTIVVEFLLMVFCKTNI-------------RHIGSIMI 205
P + V +V+ + + I IG+ +
Sbjct: 577 SLGETLPGGSWHTPAPPTAWTSVVLVLAMIALALEARRIDRDSDRCRNVRRVAWIGASLG 636
Query: 206 GITIIILFTFPY-----SFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
G+ + + P +L G+ V +V + Y
Sbjct: 637 GVLWMSWWALPASWTVCGPKALILDVGLGSAVVVVSADGRAMLYDCGSD 685
>gi|313123471|ref|YP_004033730.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280034|gb|ADQ60753.1| Metallo-beta-lactamase superfamily hydrolase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 728
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 63/166 (37%), Gaps = 8/166 (4%)
Query: 56 PKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
P+++ + T+ + + +A + FL+ F+ + V + N
Sbjct: 306 PRLLLETGGILTYVLALGLVLTAKLPDCKQAFWLNGL---LTPFLLYFFYQVNVCTIFYN 362
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
+L +P +++V+P +A LL L ++ ++ ++A + G++
Sbjct: 363 VLVVPYFNYIVMPMTGLA-LLAPPGLAAFFEKILEAAEGMLANVAK---TGFGQLIYGQV 418
Query: 176 PETSF-VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ V+ FL ++ K RHI + + + + +
Sbjct: 419 KAWQLALLFVLTFLYLITRKKKYRHILAAVYLLIFVSIHFPLEGQV 464
>gi|327539406|gb|EGF26022.1| DNA internalization-related competence protein ComEC/Rec2
[Rhodopirellula baltica WH47]
Length = 905
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 70/243 (28%), Gaps = 29/243 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + + P + + I + PS +F + ++ + +
Sbjct: 404 LARPHHPLNSLSLAAIILMIWMPSE-----IFGIGVQLSFLAVATLLMCGRPFSSALTPA 458
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGT-------------YGSASASIFLIKHFHCIPVY 110
+ ++ + + R + + A + FH +
Sbjct: 459 AETIRVEERFDELARQSQTAWRRLLSFCLSWTGRVLWYSGAVTLMALPLVWSQFHVVSPI 518
Query: 111 GLIANILAIPILSFVVIPAGLIAILL-MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+I N++ P+++ + + + + SL IP GV L I+ + +
Sbjct: 519 SVIVNVMLSPLMALALSAGVMTILAGWWLPSLAWIPGGVCGKLLSIMQWMIDSAATLSGG 578
Query: 170 -FCIGRIPETSFVTIVVEFLLMVF---------CKTNIRHIGSIMIGITIIILFTFPYSF 219
F + P V + + + + G ++ I I +
Sbjct: 579 HFWLPSPPTIWIVVFYLGLIAWAAIRPMVTSQGIRRRVIEAGLLVSWIGIAYGLATYPAE 638
Query: 220 SPD 222
PD
Sbjct: 639 LPD 641
>gi|319786918|ref|YP_004146393.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoxanthomonas suwonensis 11-1]
gi|317465430|gb|ADV27162.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoxanthomonas suwonensis 11-1]
Length = 775
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 46/163 (28%), Gaps = 23/163 (14%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
F + G++ W + S +
Sbjct: 348 QAGFWLSFAGVA--------------------WLVWCLPVEGGSHWLRDFLRAQGVATLG 387
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGL 153
F + G +AN+LAIP S VV+P L+ LL L + + A
Sbjct: 388 LLPLGAVLFQQASLAGPLANLLAIPWWSLVVVPLSLVGTLLEALHGGAGGWAWRLAAACF 447
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
D + ++ + + + + + + ++ +
Sbjct: 448 DPSWRLFEGMAGSPFALWWLPEARGWAVLPALAGAFWLMLPRG 490
>gi|238893969|ref|YP_002918703.1| putative recombination protein with metallo-hydrolase domain
[Klebsiella pneumoniae NTUH-K2044]
gi|238546285|dbj|BAH62636.1| putative recombination protein with metallo-hydrolase domain
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
Length = 807
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 38/325 (11%), Positives = 106/325 (32%), Gaps = 43/325 (13%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ + G ++ P L ++ + +++ +
Sbjct: 353 RWTAWQVWLCCLGAILVADPLAVLSQSL-----WLSAFAVAGLIFWFQWLPLPA---GRW 404
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W WK I ++ + + + FH I + + AN+LA+P+++ +
Sbjct: 405 RWPWKTIIALVH---------LQAGVTLLLLPLQLLLFHGISLTSMAANLLAVPLVTLLA 455
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT---- 182
+P L A+L+ + + ++ ++ +A +A + + R+P+ +
Sbjct: 456 VPLILTAMLVHLSGPEL---------VESLLWLAADRVLALLFWGLRRLPDGWLMLDTRW 506
Query: 183 ---IVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPD----LLISEKGNLVAL 234
++ +LL++ + + RH ++ + + ++ F D ++ L +
Sbjct: 507 LWISILPWLLVMGWRFQSWRHSPALCLSVLFLLTRPFSRQPPADEWRVTMLDVGQGLAMV 566
Query: 235 VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKF 294
++++ Y P+ W P ++ LQ + E L
Sbjct: 567 IERHGKALLYDTGPA-----WPQGDSGQQVIIPWLRWHHLQLQGIMLSHEHLDHRGGLDS 621
Query: 295 LCIKKSFCVGCHRSDVIVGVLKRKD 319
+ + +
Sbjct: 622 VLQAWPQAWVRSPLGWAHHLPCHRG 646
>gi|188534267|ref|YP_001908064.1| Putative competence-related protein [Erwinia tasmaniensis Et1/99]
gi|188029309|emb|CAO97186.1| Putative competence-related protein [Erwinia tasmaniensis Et1/99]
Length = 754
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 78/280 (27%), Gaps = 31/280 (11%)
Query: 1 MLSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+L + + P+ + + P L + + +Y +
Sbjct: 296 ILRLRGIHCQPWQIWSLCIALILFFDPLSLLSDSL-----WLSSMAVGGLLLWYHNFPLP 350
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
W ++ + FH I + L+AN+ A+
Sbjct: 351 VRFLRRWYWLPLRLLH------------LQLGMMLLLMPVQALMFHGISLSALVANLWAV 398
Query: 120 PILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
P++S V +P L+A++ L + + + + L ++ + + +
Sbjct: 399 PLVSLVTVPLILVALVCHALPGISALLWFGVDRSLALVFIPLQY---LPHGWLPVDRTLS 455
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALV 235
+ +L R + + +++ P+ + L +V
Sbjct: 456 VASVLCW-LILACLRFGWWRTSTASIASTALLLCSWRSLLPEPEWRVDMLDVGHGLAVVV 514
Query: 236 DKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
+N + Y W H P + + L
Sbjct: 515 SRNGEATLYDTGNR-----WPGGDAARSHILPWLAWQGLH 549
>gi|89075814|ref|ZP_01162198.1| hypothetical Rec2-related protein [Photobacterium sp. SKA34]
gi|89048435|gb|EAR54011.1| hypothetical Rec2-related protein [Photobacterium sp. SKA34]
Length = 771
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 72/205 (35%), Gaps = 6/205 (2%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
++ +F + + + + + + + +K L A I +
Sbjct: 333 SIYSASFWLSFYAVGVLIIYTLSQRYFAGRVVFDYSISSSSNHLKVFLLQ--LAKIQFWL 390
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFV-VIPAGLIAILLMILSLDNIPFGVMAW 151
F + + IANI+A+P++S + V L + L I + + + W
Sbjct: 391 MVLMLPIQWLWFGGLSLAAPIANIVAVPLVSTITVPLVLLALLTLWIQPISLLFWQCADW 450
Query: 152 GLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
L II + + + + + L+ ++ + + + +I I +
Sbjct: 451 SLIPIIEGIQWLEGAWYPLSANLTPLLWGAIVVFMALTLVPL--SSFKWLYTSVIIIALF 508
Query: 211 ILFTFPYSFSPDLLISEKGNLVALV 235
+ P +L+ + G+ +A++
Sbjct: 509 LFLKEPVKSHWKILVLDVGHGLAVL 533
>gi|260768908|ref|ZP_05877842.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio furnissii CIP 102972]
gi|260616938|gb|EEX42123.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio furnissii CIP 102972]
Length = 643
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/260 (10%), Positives = 75/260 (28%), Gaps = 24/260 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + ++ + Y ++ S + W
Sbjct: 227 MSFWLSFLAVAVVLY-----QLASRSSTQRGWRQ--------------LVMTQCTLVLLM 267
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F + + N++ IP S V++P + ++L L + +D+
Sbjct: 268 TPISAMFFSGFSLSSALYNLVFIPWFSVVIVPLLFLGLVLTSLFEQVDWIWTL---IDLS 324
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTF 215
+ + T+FV ++ + I ++ + + +
Sbjct: 325 FWPLSQALTLSESSWVAVSHATTFVLCAGGIGWVLRPLLSRDARIAVALLALGMWEFNSP 384
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
+ D+L L L+++ + Y + + +L+ P V + D
Sbjct: 385 KDRWRIDVL-DVGHGLAVLIERQQRVLLYDTGSGWPDGSYVRSLVVPLLHQRGVHQLDGL 443
Query: 276 EKNQSSLKEILRSMQPRKFL 295
+ +++L
Sbjct: 444 IISHMDSDHAGGLADAQQWL 463
>gi|253699794|ref|YP_003020983.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter sp. M21]
gi|251774644|gb|ACT17225.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter sp. M21]
Length = 777
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 46/135 (34%), Gaps = 17/135 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ DP P LF+ +F + I + + +
Sbjct: 305 LHLRREMDPVNTVMLAACAILFLSPET-----LFEVSFQLSFLAIWGLVVLAPP---LAA 356
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + + A + + + +F + + GL+AN+L +P+
Sbjct: 357 RVSKLPAPLRWLWL---------LAVASLAAVLATLVPVAYYFQRVSLVGLVANLLVVPL 407
Query: 122 LSFVVIPAGLIAILL 136
+ + + AG ++ L
Sbjct: 408 MGYGAVVAGFASLSL 422
>gi|21283268|ref|NP_646356.1| hypothetical protein MW1539 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486422|ref|YP_043643.1| hypothetical protein SAS1525 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|21204708|dbj|BAB95404.1| MW1539 [Staphylococcus aureus subsp. aureus MW2]
gi|49244865|emb|CAG43326.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
Length = 733
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVTKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 IFIISVYYIFWLLAKR 442
>gi|297207693|ref|ZP_06924128.1| competence protein ComEC [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911774|ref|ZP_07129217.1| competence protein ComEC [Staphylococcus aureus subsp. aureus
TCH70]
gi|296887710|gb|EFH26608.1| competence protein ComEC [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300886020|gb|EFK81222.1| competence protein ComEC [Staphylococcus aureus subsp. aureus
TCH70]
Length = 726
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L G+ F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I +FH + G ++N++ +P S +
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSII 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVTKFNDWIFI 419
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 420 IFIISVYYIFWLLAKR 435
>gi|206577881|ref|YP_002239438.1| DNA internalization-related competence protein ComEC/Rec2
[Klebsiella pneumoniae 342]
gi|206566939|gb|ACI08715.1| DNA internalization-related competence protein ComEC/Rec2
[Klebsiella pneumoniae 342]
Length = 754
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/321 (10%), Positives = 103/321 (32%), Gaps = 35/321 (10%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ + G ++ P L ++ + +++ +
Sbjct: 300 RWTAWQVWLCCLGAILVTDPLAVLSQSL-----WLSAFAVAGLIFWFQWVPLPA---GRW 351
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W WK + ++ + + + FH + + + AN+LA+P+++ +
Sbjct: 352 RWPWKALFALVH---------LQAGVTLLLMPLQLLLFHGVSLTSMAANLLAVPLVTLLA 402
Query: 127 IPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+P L A+LL + ++++ + L ++ + + +
Sbjct: 403 VPLILGAMLLHLTGPGMVESLLWLAADRVLALLFWGLRH---LPDGWL--PLDARWLWIS 457
Query: 184 VVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKN 238
+ +LL++ + + RH ++ + + ++++ F F D ++ L +++++
Sbjct: 458 SLPWLLVMGWRFQSWRHFPALCLSVLLLLMRPFWRPFPADEWRVTMLDVGQGLAMVIERH 517
Query: 239 TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIK 298
Y P+ W P ++ LQ + E L +
Sbjct: 518 GKALLYDTGPA-----WPQGDSGQQVIIPWLRWHHLQLQGIVLSHEHLDHRGGLNSVLQA 572
Query: 299 KSFCVGCHRSDVIVGVLKRKD 319
+ +
Sbjct: 573 WPQAWVRSPLGWARHLPCHRG 593
>gi|110597926|ref|ZP_01386208.1| ComEC/Rec2-related protein [Chlorobium ferrooxidans DSM 13031]
gi|110340503|gb|EAT58989.1| ComEC/Rec2-related protein [Chlorobium ferrooxidans DSM 13031]
Length = 744
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 73/219 (33%), Gaps = 26/219 (11%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
++ +K + + + L P PG F +++I Y P+ +
Sbjct: 346 TLGRKTFSMNSLALSDVLILLFDPLDLLSPG-----FLMTNSAVASILLLY--PRFTPMT 398
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI---LAI 119
+ SF + A IG + + +F + GL+ANI L
Sbjct: 399 GRGGGAFQAAGRLLFSSFAVTLAAVIGV------APVIAFYFGTFSLIGLLANIPVVLFS 452
Query: 120 PILSFVVIPAGLIAIL---LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI--GR 174
+L + ++P ++ +L ++ + ++ A S
Sbjct: 453 TLLMYALVPMLVLNLLSGYAASFFAESAVLFA-----RLTLNSALVFSRVPFASLSWKPD 507
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+PE + +++ +L F + + ++ ++ +
Sbjct: 508 LPEVALYYLMLSAVLFFFSRKAWGRLAISVLLGANLLFW 546
>gi|320333379|ref|YP_004170090.1| DNA internalization-like competence protein ComEC/Rec2 [Deinococcus
maricopensis DSM 21211]
gi|319754668|gb|ADV66425.1| DNA internalization-related competence protein ComEC/Rec2
[Deinococcus maricopensis DSM 21211]
Length = 743
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 38/290 (13%), Positives = 88/290 (30%), Gaps = 17/290 (5%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + A + + + + A
Sbjct: 327 LFDVGFQLSFLAVLA----------LTLTPRVAAMVPRLGERHRVVRALVYGAAATLLAE 376
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
A+ + F +P+ GL AN++A I+ +V P G +A LL L + ++
Sbjct: 377 AATLPVVAHTFGTVPLVGLPANLVAELIMGALV-PLGFLAGLLGP--LAVVVNPLVGVLA 433
Query: 154 DIIIHIAHRISVAHNEF--CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
D ++ +A A + ++ + +L V + ++ + +
Sbjct: 434 DALLAVAQAAGRAPVLTWGNVSAAGFAAYGVFALAGVLAVLGRVRPPAFLAVAGVLALGT 493
Query: 212 LFTFPYSFSPDLLISE--KGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
L S D+ + +G+ + + + + P A V
Sbjct: 494 LLPAHLSPPRDITYLDVGQGDSTLIRANGLRVLIDGGGSPGSDFDVGARTVVPALRALGV 553
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKD 319
+ D+ + + L + + + H +D ++ +
Sbjct: 554 RALDVVVATHADADHVEGLTAVLNTLPVGELWVGHRHEADPVLRAVLDAA 603
>gi|94987308|ref|YP_595241.1| membrane metal-binding protein [Lawsonia intracellularis
PHE/MN1-00]
gi|94731557|emb|CAJ54920.1| predicted membrane metal-binding protein [Lawsonia intracellularis
PHE/MN1-00]
Length = 693
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 36/240 (15%), Positives = 84/240 (35%), Gaps = 29/240 (12%)
Query: 33 GLFDFNFSSYYKGISAIGYF---YSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
G++ + + +I +F T T + + S + + I IG
Sbjct: 229 GIYHIGIQLSFLAVLSISFFNPLLQKCWKAIHKRISTTITSEILYSTITTSIKIIIFTIG 288
Query: 90 T--YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
T + F IP++ + NI+ +PIL V+P +++L L +I
Sbjct: 289 TTLIVQICTLPLCLYVFGYIPIWFPL-NIIWLPILGIFVLPLAFVSLLFCSLQCTSIGIL 347
Query: 148 VMAWG-------LDIIIHIAHRISVAHNEFCIGRIPETSFVT---IVVEFLLMVFCKT-- 195
+ + +++ + + ++ + R P + + +++ + + +T
Sbjct: 348 CINLAQIPCEILIRLLLSLKNTEIISP--IWLPR-PSWTMLLGCYLILLSIGIKLGRTGF 404
Query: 196 -----NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV---DKNTLISNYSNP 247
I G I++ + + + S L I + G A++ KN +
Sbjct: 405 TTPAKRILIAGMILVVTPLFFILSKDNSNKIRLRIMDVGQGQAILIEWGKNKRALIDAGG 464
>gi|229493191|ref|ZP_04386983.1| DNA internalization-related competence protein ComEC/Rec2
[Rhodococcus erythropolis SK121]
gi|229319922|gb|EEN85751.1| DNA internalization-related competence protein ComEC/Rec2
[Rhodococcus erythropolis SK121]
Length = 785
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 15/167 (8%), Positives = 45/167 (26%), Gaps = 16/167 (9%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D+ F+ A+ + + W + +
Sbjct: 344 DWGFTLSTTATGALVIIAPVWVDVLRRRGWPRWFSE-------------MTAVSGAAFVV 390
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWGLD 154
+ + V + AN+ P++ + + +IA+ L+ + + +
Sbjct: 391 TAPLVGAMAGTFSVVTIAANMAVAPVIGIITVFGAVIALCALICPPIAVFVAPLARPPMG 450
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL--LMVFCKTNIRH 199
++ ++ R + + + +V L + R
Sbjct: 451 WLLCVSERAAALPGASVVVPSGLIGALVVVGVLLAAALTLWNRISRW 497
>gi|117617570|ref|YP_857284.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117558977|gb|ABK35925.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 761
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 5/117 (4%)
Query: 126 VIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+IP LI +LL LS L ++ F + GL ++ R++ + P
Sbjct: 410 IIPLALIGVLLAPLSGELAHLLFWLADVGLQWVLWALARLASQWQLWWPV--PGWVLPFT 467
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ LL ++ G ++L +P L + + G +A++
Sbjct: 468 ALLTLLWCAWHVPGGRP-LLLPGGVALLLAAWPAPTHWQLRVLDVGQGLAVLITRGE 523
>gi|325684380|gb|EGD26549.1| ComE operon protein 3 [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 728
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 63/166 (37%), Gaps = 8/166 (4%)
Query: 56 PKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
P+++ + T+ + + +A + FL+ F+ + V + N
Sbjct: 306 PRLLLETGGILTYVLALGLVLTAKLPDCKQAFWLNGL---LTPFLLYFFYQVNVCTIFYN 362
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
+L +P +++V+P +A LL L ++ ++ ++A + G++
Sbjct: 363 VLVVPYFNYIVMPMTGLA-LLAPPGLAAFFEKILEAAEGMLANVAK---TGFGQLIYGQV 418
Query: 176 PETSF-VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ V+ FL ++ K RHI + + + + +
Sbjct: 419 KAWQLALLFVLTFLYLITRKKKYRHILAAVYLLIFVSIHFPLEGQV 464
>gi|226355223|ref|YP_002784963.1| competence protein ComEC/Rec2 [Deinococcus deserti VCD115]
gi|226317213|gb|ACO45209.1| putative competence protein ComEC/Rec2; putative membrane protein
[Deinococcus deserti VCD115]
Length = 771
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 18/186 (9%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + + A+ + + + +
Sbjct: 362 DVGFQLSFLAVLALTQSARLADRLPERWPR---------------ALRLALSATVLAELG 406
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ F +P+ GL AN+LA +++ +V P G +A LL L + + +
Sbjct: 407 TLPVIASTFGELPLVGLPANLLAGGVMAVLV-PLGFVAGLLGPLG--GVVNLAVEPLAGL 463
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
++ I A P + +++ + +R + + L
Sbjct: 464 LLGIVEVFGRAPVLSWGQIAPVGVASYALCALAGVLWLRGQVRAQVVLGTVLACTALTLL 523
Query: 216 PYSFSP 221
P P
Sbjct: 524 PGQLRP 529
>gi|152969497|ref|YP_001334606.1| recombination protein [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150954346|gb|ABR76376.1| putative recombination protein, metallo-hydrolase domain
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 754
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 36/319 (11%), Positives = 102/319 (31%), Gaps = 31/319 (9%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
++ + G ++ P L ++ + +++ +
Sbjct: 300 RWTAWQVWLCCLGAILVADPLAVLSQSL-----WLSAFAVAGLIFWFQWLPLPA---GRW 351
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W WK I ++ + + + FH + + + AN+LA+P+++ +
Sbjct: 352 RWPWKTIIALVH---------LQAGVTLLLLPLQLLLFHGVSLTSMAANLLAVPLVTLLA 402
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPETSFVTIVV 185
+P L A+L+ + D I ++ D ++ + + + + + ++
Sbjct: 403 VPLILTAMLVHLSGPD-IVESLLWLAADRVLALLFWGLRRLPDGWLT--LDARWLWISIL 459
Query: 186 EFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKNTL 240
+LL++ + + RH ++ + + ++ F D ++ L +++++
Sbjct: 460 PWLLVMGWRFQSWRHSPALCLSVLFLLTRPFSRQPPADEWRVTMLDVGQGLAMVIERHGK 519
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
Y P+ W P ++ LQ + E L +
Sbjct: 520 ALLYDTGPA-----WPQGDSGQQVIIPWLRWHHLQLQGIMLSHEHLDHRGGLDSVLQAWP 574
Query: 301 FCVGCHRSDVIVGVLKRKD 319
+ +
Sbjct: 575 QAWVRSPLGWAHHLPCHRG 593
>gi|311280173|ref|YP_003942404.1| DNA internalization-related competence protein ComEC/Rec2
[Enterobacter cloacae SCF1]
gi|308749368|gb|ADO49120.1| DNA internalization-related competence protein ComEC/Rec2
[Enterobacter cloacae SCF1]
Length = 751
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 71/245 (28%), Gaps = 23/245 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + P L ++A+ ++Y + +
Sbjct: 299 RRWSSWEVWLCGMAAILAMDPLAVLSQSL-----WLSCFAVAALIFWYQ--WVPAPRWTR 351
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W + + + FH + + AN+ A+P+++ +
Sbjct: 352 GGWLLNLLH-------------LQVGLMFLLLPLQVLLFHGVSTVSVAANLFAVPLVTLL 398
Query: 126 VIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
++P L +LL + ++ + + + + + H + + T
Sbjct: 399 IVPLILTGMLLHLTGPAIVEFGVWQITDALMAGLFWLLHHLPAGWLNVDARGLWLTLLPW 458
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+++ T G++ I +T ++ L ++++N
Sbjct: 459 LLIAVWRFHAWATAPALWGTLCILLTFPFWRFTVGHPWRVTMLDVGQGLAMVIERNGRAI 518
Query: 243 NYSNP 247
Y
Sbjct: 519 LYDTG 523
>gi|261418467|ref|YP_003252149.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y412MC61]
gi|319767572|ref|YP_004133073.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y412MC52]
gi|261374924|gb|ACX77667.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y412MC61]
gi|317112438|gb|ADU94930.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y412MC52]
Length = 749
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 74/262 (28%), Gaps = 36/262 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ P A + + P + F +F + ++ + S M+ +
Sbjct: 297 KGRIHPLDALSWTALALLVFDPY-MVWDVGFQLSFLVTFALLAHVSVLASARSMLQN--- 352
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+A L+ HF+ + V+ + N+ +P SF
Sbjct: 353 --------------------LFQTALAAQLAALPVLLYHFYEVSVWSVGLNVFFVPWYSF 392
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTI 183
V++P ++ + S + + +++ + H S +GR
Sbjct: 393 VILPLAFLSAVF-PFS---PLIWLFSRLIELTDAVVHFFSVDYSFMLVLGRPGPWCLAGY 448
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKNT 239
+ R I + L +P ++ +G+ V + +
Sbjct: 449 LTAIAAAFLDWERGRLIRGLTAVAAATALHMASPYMNPKGEVTILDVGQGDCVYIELPHR 508
Query: 240 LIS---NYSNPPSFIFSQWKSA 258
+ P + W+
Sbjct: 509 KAVYLIDTGGTPEWAREPWRKR 530
>gi|304403908|ref|ZP_07385570.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus curdlanolyticus YK9]
gi|304346886|gb|EFM12718.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus curdlanolyticus YK9]
Length = 918
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 49/151 (32%), Gaps = 16/151 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + + + + + + W++ + + I
Sbjct: 364 DIGFQLSFIVTAGLIVGVAPVRALMPK-------WRRGKMLLDAIAVTI------VAQIV 410
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI-LLMILSLDNIPFGVMAWGLD 154
+ I +F+ L AN + +P +SF+V+P G ++ L I + +A L+
Sbjct: 411 SFPVSIYYFNQWNPLSLPANFVLVPFISFIVMPLGAASLTALSIWPVAGHWLANVAEALN 470
Query: 155 IIIH--IAHRISVAHNEFCIGRIPETSFVTI 183
+ + + + + + P
Sbjct: 471 ALTFSLVEYTAAQREWQTIWAKPPIWWVALW 501
>gi|66044877|ref|YP_234718.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. syringae
B728a]
gi|63255584|gb|AAY36680.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. syringae
B728a]
Length = 738
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 74/217 (34%), Gaps = 26/217 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + + S +
Sbjct: 314 VLIFEPLVTLQPG-----FWLSFAAVGILILIF-------------SGRLGAWSWWQSWT 355
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ +G A I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 356 RAQWLIAVGLLPILLALNLP------ISLSGPFANLLAVPWVSVIVLPPALLGTLLLPVP 409
Query: 141 -LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + L + ++ A + +P ++ ++ LL++ K +R
Sbjct: 410 VVGEGLLWLAGGALQGLFVFLGAVAAALPAWLPSAVPVWAWWLSLLGALLLLLPKGVPLR 469
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+G ++ + + D+L + G +A++
Sbjct: 470 PLGWPLLLLCVFPPLESVPEGQVDVLQLDVGQGLAIL 506
>gi|308535348|ref|YP_002139896.2| competence protein, ComEC-like [Geobacter bemidjiensis Bem]
gi|308052693|gb|ACH40100.2| competence protein, ComEC-related, putative [Geobacter bemidjiensis
Bem]
Length = 823
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 17/135 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ DP P LFD +F + I + +
Sbjct: 351 LYLRREMDPVNTVMLAACAILFLAPQ-----DLFDVSFQLSFLAIWGLVVLAPPLAAPVT 405
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+++ + + + +F + + GL+AN+L +P+
Sbjct: 406 KLPALLRWLWLLAA------------ASLAAVLATLVPVAYYFQRVSLVGLVANLLVVPL 453
Query: 122 LSFVVIPAGLIAILL 136
+ + + AG ++ L
Sbjct: 454 MGYGSVVAGFASLSL 468
>gi|254447945|ref|ZP_05061409.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium HTCC5015]
gi|198262371|gb|EDY86652.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium HTCC5015]
Length = 769
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 17/166 (10%), Positives = 41/166 (24%), Gaps = 21/166 (12%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+F + ++ I S + ++
Sbjct: 327 SVFSAGLWLSFAAVAWILIILSRLPRH---------WPRWQKTLAMQC----------VL 367
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG-LIAILLMILSLD-NIPFGVMA 150
F V G ++NI+ IP+ + +++P LI +L + +
Sbjct: 368 PLCLWPITQLWFGQGAVLGALSNIVLIPLTALLILPLACLIGLLSWLWPAATQAILPLAD 427
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
G+ + ++ ++ L V
Sbjct: 428 EGVRALHGAMAWVADQPLAQASQAAIHWQQAALLSALLFFVLWHWR 473
>gi|153213094|ref|ZP_01948632.1| Rec2-related protein [Vibrio cholerae 1587]
gi|124116141|gb|EAY34961.1| Rec2-related protein [Vibrio cholerae 1587]
Length = 580
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 67/219 (30%), Gaps = 33/219 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + W + + +
Sbjct: 293 SFWMSFLAVAIVLYQLASQSQRQVWWKALLWAQVFLVCL-------------------MA 333
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F + V ++ N++ IP S V++PA + +LLM++ W
Sbjct: 334 PVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVV---WPSVAAAYWP----- 385
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFL---LMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + V + +++ + + + + ++ L+
Sbjct: 386 WVDWTFLPLDWALQFADVGWWVVPSKVQGVVAASVVILLLYRFMSLKACSLLLGMMGLWW 445
Query: 215 FPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
+ S +P ++ L +++++ Y S+
Sbjct: 446 WFPSLTPLWRMDVLDVGHGLAIVIEQDEQAIVYDTGSSW 484
>gi|314918450|gb|EFS82281.1| ComEC/Rec2-related protein [Propionibacterium acnes HL050PA1]
Length = 539
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/186 (10%), Positives = 46/186 (24%), Gaps = 17/186 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + + + +
Sbjct: 329 VGFWLSVCATAGILWWAQPWSVAMEWAPA---------------WLAVGVTVPWAAQVTT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ + GL+AN+ A P + + +L I L + W +
Sbjct: 374 QPVITWMAGTVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGMPFGRLAGWCVQP 433
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
II IAH + A + + + + + T + + + +
Sbjct: 434 IIWIAHFGAKAPSGLIRWPAGGWALGVL-AGLCMGLALITPTVLAKPWLTALAGLAVIAA 492
Query: 216 PYSFSP 221
P
Sbjct: 493 MVVRPP 498
>gi|294010879|ref|YP_003544339.1| ComEC/Rec2-related protein [Sphingobium japonicum UT26S]
gi|292674209|dbj|BAI95727.1| ComEC/Rec2-related protein [Sphingobium japonicum UT26S]
Length = 327
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 1/130 (0%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I RL PP+ P+ PG +DF +Y++GI A G ++ + + +
Sbjct: 169 GAIIAFRTRLMPPAPPSLPGGYDFARRAYFEGIGATGRALPPVAVLRPATAAPRLRTRLF 228
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ + + + + GL A++L+I L + A +I
Sbjct: 229 EHVLERVPGKGAGIAAALATGDQGAIAQADAEAMRRSGL-AHLLSISGLHVTALIAAVIF 287
Query: 134 ILLMILSLDN 143
+L+ +++L
Sbjct: 288 LLMRMMALSR 297
>gi|116625478|ref|YP_827634.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Solibacter usitatus Ellin6076]
gi|116228640|gb|ABJ87349.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Solibacter usitatus Ellin6076]
Length = 844
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 53/203 (26%), Gaps = 47/203 (23%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY------------------- 51
+ L P LFD +F + + +G
Sbjct: 341 MNLLAAVALGFLLFDPDQ-----LFDASFQLTFLAVGFLGAFAAPAIAATSGPLGAGLRE 395
Query: 52 ----------------FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
F +++ + +W + + + +
Sbjct: 396 LSDVGRDPHLEPRSAQFRIELRLLAETLRAPSWVVTAPARAVLFVYEIVLTSAVVQLGLA 455
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ + +FH + GL AN +P++ FVV P G +AI + + L
Sbjct: 456 LPMVV--YFHRLGFSGLSANAFVVPLMGFVV-PVGFVAI----FTGWAWVARIAGMLLWA 508
Query: 156 IIHIAHRISVAHNEFCIGRIPET 178
+ + + I P
Sbjct: 509 SQKVVWYHAGLEPSWRIPTPPVW 531
>gi|239626087|ref|ZP_04669118.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520317|gb|EEQ60183.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 861
Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 59/187 (31%), Gaps = 28/187 (14%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ I L P LF F + +SAIG + + E
Sbjct: 343 GLAAIILLW--KSPYL--LFASGFQLSFGAVSAIGGLGGWLRSGFHMEKGW--------- 389
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ + ++ H++ P+YG+ N+L IP+++ +++ +G++ I
Sbjct: 390 -------RNTILMSLCVQIVITPVVLYHYYQHPLYGIFMNLLVIPLIA-ILMYSGILGIF 441
Query: 136 LMILSLDNIPFGVMAWGLDIII----HIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLM 190
L L + G ++ + + +GR V
Sbjct: 442 LGSFWLKG-GIIAVGAG-HYVLCFYEWLCRQAERLPGYCLVMGRPSWIQIVLYGAGMAGA 499
Query: 191 VFCKTNI 197
++ +
Sbjct: 500 LYGIRRL 506
>gi|166712276|ref|ZP_02243483.1| competence protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 802
Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 24/161 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + T +
Sbjct: 373 GFWLSFAGVAWLVWCLPSDDRA---------------------IVRGFLSAQTVATVGLL 411
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F + G AN++AIP +FVV+P L+ L + + + W ++
Sbjct: 412 PLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLVGTALEAIYPGAGVWAWQLAGWCFEL 471
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + + + + ++ ++ +
Sbjct: 472 TWPGFVWLGRTTVALWWVPESDGVALIAALLGAFWLLLPRG 512
>gi|218670731|ref|ZP_03520402.1| hypothetical protein RetlG_03303 [Rhizobium etli GR56]
Length = 236
Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGI 46
PF I G ARL+PP+GPA PGL DF+F +Y+ GI
Sbjct: 199 APFEIGDVITGRARLTPPAGPALPGLNDFSFGAYFDGI 236
>gi|330973874|gb|EGH73940.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 600
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 74/217 (34%), Gaps = 26/217 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + + S +
Sbjct: 176 VLIFEPLVTLQPG-----FWLSFAAVGILILIF-------------SGRLGAWSWWQSWT 217
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ +G A I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 218 RAQWLIAVGLLPILLALNLP------ISLSGPFANLLAVPWVSVIVLPPALLGTLLLPVP 271
Query: 141 -LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + L + ++ A + +P ++ ++ LL++ K +R
Sbjct: 272 VVGEGLLWLAGGALQGLFVFLGAVAAALPAWLPSAVPVWAWWLSLLGALLLLLPKGVPLR 331
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+G ++ + + D+L + G +A++
Sbjct: 332 PLGWPLLLLCVFPPLESVPEGQVDVLQLDVGQGLAIL 368
>gi|213021524|ref|ZP_03335971.1| hypothetical protein Salmonelentericaenterica_01621 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 300
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 67/212 (31%), Gaps = 22/212 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+ ++ + ++Y + + ++ +
Sbjct: 7 SLWLSAFAVAGLLFWYQWFPAPNGNFP------------RGLRWLLNLLHLQAGITLLLL 54
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGLD 154
+ FH I V ++AN+ A+P ++FV +P L ++L L+ + + L
Sbjct: 55 PLQVALFHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALA 114
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ ++ ++ + + L+ + G+ ++
Sbjct: 115 ALFYL---LNALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPL 171
Query: 215 F----PYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + +L +G +A+V + +I
Sbjct: 172 WRPINASGWQVHMLDVGQGLAIAIVRGDKVIL 203
>gi|167759414|ref|ZP_02431541.1| hypothetical protein CLOSCI_01761 [Clostridium scindens ATCC 35704]
gi|167662971|gb|EDS07101.1| hypothetical protein CLOSCI_01761 [Clostridium scindens ATCC 35704]
Length = 741
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 39/127 (30%), Gaps = 27/127 (21%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D F + + A+ I K +
Sbjct: 296 SLYDGGFWLSFGAVFAVIIVLPIFKGLPVQGFW----------------------ASVSI 333
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + ++ +F P Y L+ N+ IP++S ++ + +L IP V
Sbjct: 334 NLTILPAMLFYFFEFPSYSLLLNLFVIPLMSAMLF----LGLLGSAAYAAGIPIAVFGLK 389
Query: 153 L-DIIIH 158
+ I+
Sbjct: 390 ICKAILW 396
>gi|325290554|ref|YP_004266735.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophobotulus glycolicus DSM 8271]
gi|324965955|gb|ADY56734.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophobotulus glycolicus DSM 8271]
Length = 791
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 48/158 (30%), Gaps = 14/158 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L D +F + I + + + +G
Sbjct: 336 LRDVSFQLSFASSLGIILLTPLLEGKKPFAAMPA-------------GLRTAFCLGLGAQ 382
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
A L+ FH + + GL AN+ +L V+ + +L+ + L I W L
Sbjct: 383 IMAMPILMTVFHRVSLVGLAANLFIGYVLGAVLELGLIGMLLIFLPFLARIFLTAAFWLL 442
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLM 190
++ ++ F + + ++ + L+
Sbjct: 443 ELSQKGLVILASLPWADFWVLEPGKAFWLFWYLGIFLL 480
>gi|94263317|ref|ZP_01287132.1| DNA internalization-related competence protein ComEC/Rec2 [delta
proteobacterium MLMS-1]
gi|93456272|gb|EAT06402.1| DNA internalization-related competence protein ComEC/Rec2 [delta
proteobacterium MLMS-1]
Length = 862
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 6/145 (4%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + I + + Y + + + + A T + +
Sbjct: 408 SFQLSFAATAGIITMAPLLQNRYQQLAELEPPRLWLYQLLFWVGASLLA--STVATLVTA 465
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL---SLDNIPFGVMAWGLD 154
+ HFH + + I +LA P L F +P L + L + + GLD
Sbjct: 466 PLSLHHFHRLSLLSPITTLLATPPLFFWTLPLALAGLALGAVGLPGAGWLLNAST-RGLD 524
Query: 155 IIIHIAHRISVAHNEFCIGRIPETS 179
+ R++ F P
Sbjct: 525 WAGAMIGRLAELPFSFFYLSPPSAP 549
>gi|325928368|ref|ZP_08189563.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas perforans 91-118]
gi|325541244|gb|EGD12791.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas perforans 91-118]
Length = 848
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 47/160 (29%), Gaps = 24/160 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + T +
Sbjct: 373 GFWLSFAGVAWLVWCLPSDDRA---------------------IVRGFLSAQTVATVGLL 411
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F + G AN++AIP +FVV+P L+ L + + + W ++
Sbjct: 412 PLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLLGTALEAIYPGTGVWAWQLAGWCFEL 471
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCK 194
+ + + + + ++ ++ +
Sbjct: 472 TWPGFVWLGHTAVALWWVPESDGVALIAALLGAFWLLLPR 511
>gi|94271490|ref|ZP_01291961.1| DNA internalization-related competence protein ComEC/Rec2 [delta
proteobacterium MLMS-1]
gi|93450436|gb|EAT01624.1| DNA internalization-related competence protein ComEC/Rec2 [delta
proteobacterium MLMS-1]
Length = 868
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 6/145 (4%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + I + + Y + + + + A T + +
Sbjct: 414 SFQLSFAATAGIITMAPLLQNRYQQLAELEPPRLWLYQLLFWVGASLLA--STVATLVTA 471
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL---SLDNIPFGVMAWGLD 154
+ HFH + + I +LA P L F +P L + L + + GLD
Sbjct: 472 PLSLHHFHRLSLLSPITTLLATPPLFFWTLPLALAGLALGAVGLPGAGWLLNAST-RGLD 530
Query: 155 IIIHIAHRISVAHNEFCIGRIPETS 179
+ R++ F P
Sbjct: 531 WAGAMIGRLAELPFSFFYLSPPSAP 555
>gi|290890475|ref|ZP_06553550.1| hypothetical protein AWRIB429_0940 [Oenococcus oeni AWRIB429]
gi|290479871|gb|EFD88520.1| hypothetical protein AWRIB429_0940 [Oenococcus oeni AWRIB429]
Length = 676
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 50/165 (30%), Gaps = 18/165 (10%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+ HF + AN +IPI V++P +A++L +
Sbjct: 277 LLMSSVTIPIILNSKFTWHF-----LSMPANFFSIPIFGIVIMPLIGLAVVLHPFWTQAV 331
Query: 145 --PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
++A D+I IS + G++ + + +V LL + IR+
Sbjct: 332 CFINYLVALFADLI----EMISKIPGKIVFGKMEDYLVIPLVCLILLSFDQRKKIRNFSL 387
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
+ I F F + G A P
Sbjct: 388 MAIATAFTASFCF-------IHFPMNGEFSAFDIGQGDSLLLRTP 425
>gi|210633896|ref|ZP_03297911.1| hypothetical protein COLSTE_01828 [Collinsella stercoris DSM 13279]
gi|210159065|gb|EEA90036.1| hypothetical protein COLSTE_01828 [Collinsella stercoris DSM 13279]
Length = 739
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 38/400 (9%), Positives = 109/400 (27%), Gaps = 44/400 (11%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+L + + P T+ + L P G FD F + I F
Sbjct: 275 VLGGRRAHAPSALSLTVSLLVVLDP--GVV----FDLGFQLSAMSVLFITVFAPYMTFTL 328
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + + + I F + + +AN++ P
Sbjct: 329 ERLRVPALLAEPL-------------ALTLVAQWATLPLTIPVFGEVSLIAPVANLIVGP 375
Query: 121 ILSFVVIPAGLIAILL---------------MILSLDNIPFGVMAWGLDIIIHIAHRISV 165
I+S +++ + L ++L + + + + +A I+
Sbjct: 376 IMSALLVTGLVSVALATAVQMAASVLGPAVSLVLGHVGVLMWAPRFLAQLAMFLAGAIAR 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI---RHIGSIMIGITIIIL-----FTFPY 217
++++ + + R +G+ + +++ +T
Sbjct: 436 VPFASISVPGAAW-LPLAFYGAAVLLYVRWHAISPRGLGACASVLAALLVLHVVRWTLFA 494
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+L +G+ + L D + + + + +
Sbjct: 495 PAGVTVLDVGQGDAILLRDGAHAVLVDAGVDDATRAALARNHVFRLDAVVVTHWDRDHWG 554
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
L + + V + L+ D + + S ++
Sbjct: 555 GLPDLAQTIPVDSLIVAEGAADGAPEEVRDLGVPIVELREGDALGVG-AFSCAVVWPDEP 613
Query: 338 INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFI 377
+ + SL++ Q +L + + + ++ +++
Sbjct: 614 VGGEENADSLVLDVAYRQGGRALSMLLTGDTERDELARYM 653
>gi|113461165|ref|YP_719234.1| recombination protein 2 [Haemophilus somnus 129PT]
gi|112823208|gb|ABI25297.1| recombination protein 2 [Haemophilus somnus 129PT]
Length = 808
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 57/157 (36%), Gaps = 9/157 (5%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + +Y + + ++ ++ +
Sbjct: 336 SFWLSIGAVGCLIMWYQWIPLNLFLWKEKPLAQSSLKKVRYFIG---LFHLQFGLLWFFT 392
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F+ I + G AN+L +P+ SF+++P L A+L + + I
Sbjct: 393 PIQLLIFNGIALNGFWANLLLLPLFSFLLVPLILFAVLTE----GALNSW--NIADQLAI 446
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
I + + N++ + E+ F++ ++ L + CK
Sbjct: 447 WINQLLKLLPNQWINISLAESYFISAILALLFTLCCK 483
>gi|228471514|ref|ZP_04056289.1| competence protein [Capnocytophaga gingivalis ATCC 33624]
gi|228277090|gb|EEK15770.1| competence protein [Capnocytophaga gingivalis ATCC 33624]
Length = 448
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 46/137 (33%), Gaps = 19/137 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF+ F Y + +I +F E + + F N I +
Sbjct: 126 LFEVGFQLSYMAVLSIEFFLPYFNRYIYFE----------NKLLNFFTNII--KVSIAAQ 173
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-------ILSLDNIPF 146
+ +FH L+ NIL +P+L ++ ++ +L ++ +
Sbjct: 174 IGVFPLSLYYFHQFAGLFLLTNILILPLLGGILAIGIIVVLLSYRGWVTSGLIYCYDTIL 233
Query: 147 GVMAWGLDIIIHIAHRI 163
+M + + + H +
Sbjct: 234 HLMNKIIAWVASVEHMV 250
>gi|84386591|ref|ZP_00989617.1| Rec2-related protein [Vibrio splendidus 12B01]
gi|84378397|gb|EAP95254.1| Rec2-related protein [Vibrio splendidus 12B01]
Length = 744
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 66/204 (32%), Gaps = 34/204 (16%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + A+ Y + S NT ++ + + I + +
Sbjct: 297 SFWLSFGALGAVIYI----ALNSRPSSSNTTLIHRVLQLIK---------IQLMLTFLIA 343
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAG---------------LIAILLMILSLD 142
F I F + + ++ N+L +P +S V IP ++++ +
Sbjct: 344 PFSILFFKGVSLVSVLYNLLLLPWVSMVTIPLLFLAMLLSLILESVSEVMSLTALSHGFS 403
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ ++ LD ++ + + + F+ + F+ +T
Sbjct: 404 EQLWMLVDLSLDPLVFSLPFSERFWIQVDNHSMALSVFLILFFGFVSRYLKRT------L 457
Query: 203 IMIGITIIILFTFPYSFSPDLLIS 226
++ I + +L+ L I
Sbjct: 458 SILVIAVFVLWWEFGKQQNKLTID 481
>gi|21242823|ref|NP_642405.1| competence protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21108310|gb|AAM36941.1| competence protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 849
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 47/160 (29%), Gaps = 24/160 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + T +
Sbjct: 374 GFWLSFAGVAWLVWCLPSDDRA---------------------IVRGFLSAQTVATVGLL 412
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F + G AN++AIP +FVV+P L+ L + + + W ++
Sbjct: 413 PLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLLGTALEAIYPGTGMWAWQLAGWCFEL 472
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCK 194
+ + + + + ++ ++ +
Sbjct: 473 TWPGFVWLGQTALALWWVPESDGVALIAALLGAFWLLLPR 512
>gi|78047807|ref|YP_363982.1| competence-related DNA-transformation transporter [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|78036237|emb|CAJ23928.1| Competence-related DNA-transformation transporter [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 849
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 47/160 (29%), Gaps = 24/160 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + T +
Sbjct: 373 GFWLSFAGVAWLVWCLPSDDRA---------------------IVRGFLSAQTVATVGLL 411
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F + G AN++AIP +FVV+P L+ L + + + W ++
Sbjct: 412 PLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLLGTALEAIYPGTGVWAWQLAGWCFEL 471
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCK 194
+ + + + + ++ ++ +
Sbjct: 472 TWPGFVWLGHTAVALWWVPESDGVALIAALLGAFWLLLPR 511
>gi|297529319|ref|YP_003670594.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. C56-T3]
gi|297252571|gb|ADI26017.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. C56-T3]
Length = 749
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 83/272 (30%), Gaps = 24/272 (8%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
M ++ P G+ L+ A D + + ++ + + P M++
Sbjct: 269 MYAVLAGASPSVLRACATGMIVLAVQWKKAMIHPLD---ALSWTALALLVF---DPYMVW 322
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIG------TYGSASASIFLIKHFHCIPVYGLIA 114
++ S L R+ + +A L+ HF+ + V+ +
Sbjct: 323 DVGFQLSFLVTFALLAHVSVLASARSMLQNLFQTALAAQLAALPVLLYHFYEVSVWSVGL 382
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIG 173
N+ +P SFV++P ++ + S + + +++ + H S +G
Sbjct: 383 NVFFVPWYSFVILPLAFLSAVF-PFS---PLIWLFSRLIELTDAVVHFFSVDYSFMLVLG 438
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS----EKG 229
R + R I + L +P ++ +G
Sbjct: 439 RPGPWCLAGYLTAIAAAFLDWERGRLIRGLTAVAAATALHMASLYMNPKGEVTILDVGQG 498
Query: 230 NLVALVDKNTLIS---NYSNPPSFIFSQWKSA 258
+ V + + + P + W+
Sbjct: 499 DCVYIELPHRKAVYLIDTGGTPEWAREPWRKR 530
>gi|257876956|ref|ZP_05656609.1| competence protein ComEC [Enterococcus casseliflavus EC20]
gi|257811122|gb|EEV39942.1| competence protein ComEC [Enterococcus casseliflavus EC20]
Length = 747
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 69/225 (30%), Gaps = 9/225 (4%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
GI + PK++ + + + +++ +A + + F
Sbjct: 311 GIVLTALLFVDPKVLLQTSGQLSLLMTFLIMMQRPIKLTWFWRSQFLTVLAAPVIVSL-F 369
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+ P++G + +P V++PA + + L + GL +++ +A +
Sbjct: 370 YEFPLFGGFLTFVFLPFFQLVLLPACFLMFIAGTLFPTISGLIALFEGLLLLMEVA--VG 427
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF----TFPYSFS 220
L+ + R + I + + I+F P
Sbjct: 428 AVGGVSITVGAVPAGLAASCCLLGLLCY--QKKRWLLVICFSLVVPIVFQQNRVLPTISY 485
Query: 221 PDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
D+ + L A ++ + + SF W+ E
Sbjct: 486 VDVGQGDSIVLQAEKNREVYVIDTGGSLSFPKENWQERKRQAAAE 530
>gi|253682555|ref|ZP_04863352.1| ComE operon protein 3 [Clostridium botulinum D str. 1873]
gi|253562267|gb|EES91719.1| ComE operon protein 3 [Clostridium botulinum D str. 1873]
Length = 446
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 52/154 (33%), Gaps = 24/154 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K YD + + I + P D F+ + I + K +
Sbjct: 257 KNYDSLSSLSLAAIILLIMKPYYVI-----DVGFNLSFLATLGIILYNKKIKRV------ 305
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + + + + + I ++ + N++ +PI S V
Sbjct: 306 -------LYKLPTKINKGLSMTFS--AQIFSMPYAMGTLNNISMFFIPGNLILVPIYSIV 356
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
+ LI L ++ +I F + + L++++ +
Sbjct: 357 I----LIGNLAVLFYCSDIVFNIFSRVLNLLLIV 386
>gi|158335299|ref|YP_001516471.1| competence protein [Acaryochloris marina MBIC11017]
gi|158305540|gb|ABW27157.1| competence protein, putative [Acaryochloris marina MBIC11017]
Length = 757
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 66/202 (32%), Gaps = 21/202 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + + + W ISS+ +
Sbjct: 348 IWDLGFQLSFLATLGLIV------TVPPLTQKLDWLPPAISSL---------FAVPIAAM 392
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW-G 152
+ F P+Y L+ANI P+L + I+ ++ L +
Sbjct: 393 LWTLPLQLYQFGIAPIYCLLANICTTPLLILLTAGGFCSGIVAVMWPLAGGLLAWLLAIP 452
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVT---IVVEFLLMVFCKTNIRHIGSIMIGIT 208
+I + +IS+ +G + V ++V L+ K + + ++ +GI
Sbjct: 453 TQGLIWLVTQISLLPGASLTLGTLSIWQLVLLYGLLVSAWLLPVWKQRLPLLITLALGII 512
Query: 209 IIILFTFPYSFSPDLLISEKGN 230
I+ ++ + + I ++
Sbjct: 513 ILPIW-HYQVYRFQITIFDRAT 533
>gi|146282978|ref|YP_001173131.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas stutzeri A1501]
gi|145571183|gb|ABP80289.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas stutzeri A1501]
Length = 741
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 18/145 (12%), Positives = 46/145 (31%), Gaps = 21/145 (14%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
F + ++ + +S + +
Sbjct: 327 QPGFWLSFGAVAVLALAFSG-------------------RLGSWCWWMALTRAQWAATLG 367
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLD 154
L+ + G +AN+LA+P +S + +P L+ LL+ + + V+ + L
Sbjct: 368 LLPLLLALGLPVSASGPLANLLAVPWVS-LTVPFALLGTLLLPVAGVGEALLSVVGYSLA 426
Query: 155 IIIHIAHRISVAHNEFCIGRIPETS 179
++ + I+ + +P +
Sbjct: 427 LLFDVLAAIANWQPAWIAVGLPVWA 451
>gi|296111682|ref|YP_003622064.1| ComE operon protein 3 [Leuconostoc kimchii IMSNU 11154]
gi|295833214|gb|ADG41095.1| ComE operon protein 3 [Leuconostoc kimchii IMSNU 11154]
Length = 761
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 16/167 (9%)
Query: 13 AETTIEGIARLSPPSGPAF-PGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
I G+ ++ +G P +S +G P ++ S ++
Sbjct: 290 VRALIAGLIMMTRLAGCRRVPSG-------SVWAVSLLGSLIYEPGILLSLGGQLSFALT 342
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
+ + + S + +H + + N AIP+ S +++P +
Sbjct: 343 FCLIFVKKLNFWQINLLLSAVSLPLIVSQQYTWHILQT---VTNFAAIPLFSAIIVPCVM 399
Query: 132 IAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
I L I +M + + I+ + +G IP
Sbjct: 400 IGF----FGQLLPIVMHLMNAVIKLFAQTVDAIANLPGQIVVGHIPW 442
>gi|170717753|ref|YP_001784820.1| DNA internalization-related competence protein ComEC/Rec2
[Haemophilus somnus 2336]
gi|168825882|gb|ACA31253.1| DNA internalization-related competence protein ComEC/Rec2
[Haemophilus somnus 2336]
Length = 792
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 57/157 (36%), Gaps = 9/157 (5%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + +Y + + ++ ++ +
Sbjct: 320 SFWLSIGAVGCLIMWYQWIPLNLFLWKEKPLAQSSLKKVRYFIG---LFHLQFGLLWFFT 376
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F+ I + G AN+L +P+ SF+++P L A+L + + I
Sbjct: 377 PIQLLIFNGIALNGFWANLLLLPLFSFLLVPLILFAVLTE----GALNSW--NIADQLAI 430
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
I + + N++ + E+ F++ ++ L + CK
Sbjct: 431 WINQLLKLLPNQWINISLAESYFISAILALLFTLCCK 467
>gi|167752882|ref|ZP_02425009.1| hypothetical protein ALIPUT_01144 [Alistipes putredinis DSM 17216]
gi|167659951|gb|EDS04081.1| hypothetical protein ALIPUT_01144 [Alistipes putredinis DSM 17216]
Length = 506
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 22/156 (14%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L+ + +Y + + L P LFD +F + ++ I +
Sbjct: 318 LASSSEYVGMNTLAGVAFVMLLFHPDY-----LFDISFQLSFIAVAGIIAW--------- 363
Query: 62 SESHNTWTWKKISSIKQSFLNEIRA--NIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
++ ++ ++ + A IG SA+ + + F I V GL N + I
Sbjct: 364 -----GLPLCRLLRTRRKSIDMLTATLAIGFSASAATAPLISHTFGQISVVGLALNPVVI 418
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+LS+VV+ + + +++ +L + V +
Sbjct: 419 -LLSYVVVGSCTLWLVIPGTALAPLFSVVAGFAARA 453
>gi|327398421|ref|YP_004339290.1| ComEC/Rec2-like protein [Hippea maritima DSM 10411]
gi|327181050|gb|AEA33231.1| ComEC/Rec2-related protein [Hippea maritima DSM 10411]
Length = 476
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 10/130 (7%)
Query: 37 FNF-SSYYKGISAI--GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE------IRAN 87
F+F S+ Y + I + K+I + ++ I+
Sbjct: 289 FSFESASYNILFMIASIFVMINYKIILNPSFVLSFFMTFIAIFLYRLSFRRLQKYWFFLA 348
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ S + +F ++NI+ IP+ FVV+P I L L
Sbjct: 349 FTVFMSLFSLPITDFYFGRFTPLSFLSNIIFIPLFGFVVVPLAFIGSLASFLPYSVFKVW 408
Query: 148 VMAWGLDIII 157
+ ++ II
Sbjct: 409 LFDV-INWII 417
>gi|297584664|ref|YP_003700444.1| DNA internalization-like competence protein ComEC/Rec2 [Bacillus
selenitireducens MLS10]
gi|297143121|gb|ADH99878.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
selenitireducens MLS10]
Length = 769
Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/209 (10%), Positives = 58/209 (27%), Gaps = 40/209 (19%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+I IA L+ + F +F + + I
Sbjct: 317 GISIVFIALLTVNPYYLYHVGFQLSFLTSFALI------------------------MSS 352
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG--- 130
+ Q + A+ +I F ++ + N+L +P ++ ++P
Sbjct: 353 PLLSQGNRITQLMKVTLAAQIIAAPVMISIFFEWSLFAVFMNLLMVPAVTIFLLPGAFLT 412
Query: 131 LIAILLMI------LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ + L L + VM ++ + G+ + +
Sbjct: 413 VFGLWLWPSVTVKVTGLTEMLLSVMD---GFLLWTSESAYS---SLLFGKPDTWMLLVLC 466
Query: 185 VEFL-LMVFCKTNIRHIGSIMIGITIIIL 212
+ + + R+ + + + +L
Sbjct: 467 AGSAGFFLLWEKSGRYAFTKGFTVFLAVL 495
>gi|229591210|ref|YP_002873329.1| hypothetical protein PFLU3775 [Pseudomonas fluorescens SBW25]
gi|229363076|emb|CAY50063.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 741
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 62/176 (35%), Gaps = 21/176 (11%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
F + ++ + + +S W + + L + +G
Sbjct: 324 QPGFWLSFAAVAVLVLAFGGRLGPWSLWQ----AWTRPQWLIAIGLFPVLLVLGLP---- 375
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLD 154
I + AN++A+P +S VV+P L+ L+ L + + LD
Sbjct: 376 -----------ISLSAPFANLVAVPWISLVVLPLALLGTALLPLPWVGDGLLWLAGGALD 424
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITI 209
+ + ++ + +P ++ ++ +L++ K R +G M+ + +
Sbjct: 425 GLFNGLAWLAGYMPAWIPAEVPLGYWLVSLLGAVLLLLPKGVPFRLLGWPMLLLAV 480
>gi|171910742|ref|ZP_02926212.1| predicted hydrolase of metallo-beta-lactamase fold protein
[Verrucomicrobium spinosum DSM 4136]
Length = 791
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 20/164 (12%)
Query: 27 SGPAFPGLFDFNFSSYYKGISAIG------YFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
PG F +F + I+ +G + + + T + +++Q
Sbjct: 357 QQLYAPG-FQLSF-AVLAAIALLGGPFSRPFLRWVEPDPFIPRVLLTGFQQWAWTLRQQV 414
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + + HF LIAN++ +P+ SF V+ A ++ +L L
Sbjct: 415 VG--LFTVSAAAWVGSLPLTLGHFQLATPVSLIANVVLVPL-SFCVLFAAVLTLLSAALH 471
Query: 141 LDNI------PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
L + ++AW + + A + P
Sbjct: 472 LTAVQALFSNANYLLAW---LTMKSAVFFASLPGGNFHIAAPWF 512
>gi|167010885|ref|ZP_02275816.1| competence-related protein [Francisella tularensis subsp.
holarctica FSC200]
Length = 400
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 26/145 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ + I L ++ + + + +
Sbjct: 262 KRISIVKSLLVAFVIILLIDFE-----SIYSISLWLSFSAVILLVI-------------- 302
Query: 66 NTWTWKKISSIKQSFLNEI-RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++Q I TY + + +F V ++ANI+AIP++SF
Sbjct: 303 ------ISIVLQQYKSKLIKILLAQTYLAIFLVPISVYYFGGFSVVSILANIVAIPLVSF 356
Query: 125 VVIPAGLIAILLMILSLDNIPFGVM 149
V++P L+ +LL + ++ +M
Sbjct: 357 VIVPLLLLCLLLSFIGINLWLLPMM 381
>gi|330995937|ref|ZP_08319832.1| ComEC/Rec2-like protein [Paraprevotella xylaniphila YIT 11841]
gi|329574276|gb|EGG55851.1| ComEC/Rec2-like protein [Paraprevotella xylaniphila YIT 11841]
Length = 621
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 18/161 (11%), Positives = 40/161 (24%), Gaps = 27/161 (16%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+D F + + I + + + + +
Sbjct: 279 YDVGFQLSFLAMFGILTICPRFQELP------------LMQWRYVRWIFQSLLVSFAAQL 326
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVV--IPAGLIAILLMILSLDNIPFGVMAWG 152
+ F Y A ++ P+ + ++ +P L++ + I V AW
Sbjct: 327 FTVPLVAYRFGTFSFYSAWATLVVSPLTALLIYGMPLILLS------GITGIGTTVCAW- 379
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
IA + N+ + V L
Sbjct: 380 -----WIAR-VGTWQNDSLRAMMEWPYAVVHTDWSLWFTLW 414
>gi|300853974|ref|YP_003778958.1| hypothetical protein CLJU_c07880 [Clostridium ljungdahlii DSM
13528]
gi|300434089|gb|ADK13856.1| predicted membrane protein [Clostridium ljungdahlii DSM 13528]
Length = 592
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/245 (9%), Positives = 64/245 (26%), Gaps = 34/245 (13%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + I + ++K+ + Q + + ++
Sbjct: 281 DLGFDLSFLATLGILLYNGK-------------IYRKLFMLPQKLASSM--SLTFSSQIF 325
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
++ +I N+ +P+ S +V+ + + + L + M
Sbjct: 326 TLPYIAFTIQNFSWGFMIGNLFLLPLFSIIVVLGNAVLCICFVEPLFKLLCKAMEV---- 381
Query: 156 IIHIAHRISVAHNEFCIGRIPETSF--------VTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+ + + + F+ + K R + + I
Sbjct: 382 ------IFTAIDGANMVVLKLCPEIIYLKYIDGLAFIAVFVSFLMYKKGYRKLKYVPIVC 435
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
I++ F I+ A++ + + F S W + + +
Sbjct: 436 FILVFLGVYAPFMNITFINNDNGKAAIIKQGINKVMICSYDDF-HSSWITNIKDDQYIGK 494
Query: 268 HVQKE 272
+
Sbjct: 495 VITNP 499
>gi|145296315|ref|YP_001139136.1| hypothetical protein cgR_2230 [Corynebacterium glutamicum R]
gi|140846235|dbj|BAF55234.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 554
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 79/247 (31%), Gaps = 23/247 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + +P ++ I L S A + F + I ++Y +
Sbjct: 277 SSRMEPMH-GLSLSVICLLFYDSNLAVH----YGFLLSCAATAGIVMLQP---LLYRAIG 328
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
WK + ++F I A++ T + I + ++AN+L +
Sbjct: 329 PPLAVWKVPDIVVRAFAVSIAADLVTIPIIALMA------RQISLVAVLANVLVELAVPP 382
Query: 125 VVIPAGLIAIL-LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF--V 181
+ + + + L+ S++ ++ I H+A N
Sbjct: 383 ITLLGLIAVLASLLPWSVEYPLLKIIEPFTWWIHHVAKWCQQLPNSTLEISAGWAGIAWA 442
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD------LLISEKGNLVALV 235
+ +++++ K +R + + + + D ++I++ L +
Sbjct: 443 CVAAVWVVVIIYKGYVRTLAVCCVCFFLFGAWNNRLPAQIDPTELRFVIIADDSELTDVP 502
Query: 236 DKNTLIS 242
+ LI
Sbjct: 503 EHAELII 509
>gi|268315609|ref|YP_003289328.1| DNA internalization-related competence protein ComEC/Rec2
[Rhodothermus marinus DSM 4252]
gi|262333143|gb|ACY46940.1| DNA internalization-related competence protein ComEC/Rec2
[Rhodothermus marinus DSM 4252]
Length = 797
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 76/270 (28%), Gaps = 24/270 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P A + L+ P+ PG F + + IG + +
Sbjct: 335 PLNALGAAAVVLLLADPAQLFEPG-----FQLSFAAV--IGLLLGWLPLQQRLPA----V 383
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP--ILSFVVI 127
+ +++ + + + + F++ HF + + GL N+L IP +
Sbjct: 384 IFRRPALRYLTGTL---LVTLTATLATAPFVLYHFGYVSLAGLPLNLLGIPLAAGALAGG 440
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
+++ + ++ + + P +
Sbjct: 441 LLSVLSAPFSPALAELFGQAATLCAYLLLQLGELGLRLLRPLVLHVPEPPWWMLIAPP-- 498
Query: 188 LLMVFCKT----NIRHIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALVDKNTLI 241
+L+ R ++ +++ + T P + D+L + G+ V +
Sbjct: 499 VLLGLWSRSPGIRRRSGLVLLGVLSLGLWTTPPAAPHLDVLFFDVGHGDAVLIRAPGGRH 558
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ + PF + +
Sbjct: 559 LLIDTGGRYGGRVAAEWSLLPFFRRYGIDR 588
>gi|284024646|ref|ZP_06379044.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus 132]
Length = 638
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + F+ I Y I S
Sbjct: 156 TNYAPSAVRAIIMTTLVLVITKQIKIKSIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 215
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 216 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 273
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 274 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 331
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 332 VFIISVYYIFWLLAKR 347
>gi|255525337|ref|ZP_05392277.1| ComEC/Rec2-related protein [Clostridium carboxidivorans P7]
gi|296188205|ref|ZP_06856597.1| ComEC/Rec2-related protein [Clostridium carboxidivorans P7]
gi|255511009|gb|EET87309.1| ComEC/Rec2-related protein [Clostridium carboxidivorans P7]
gi|296047331|gb|EFG86773.1| ComEC/Rec2-related protein [Clostridium carboxidivorans P7]
Length = 593
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 21/139 (15%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YD + + + L P D F + I +Y I
Sbjct: 253 MLFKNYDNISSLSLAALVILLVRPYYIT-----DIGFMLSFLSTLGILLYYKKISRI--- 304
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ I Q + + + ++ +I N+ +PI
Sbjct: 305 ----------LYKIPQKLNETLSVTLS--SQIFSVPYIAFTIQSFSSGFIIGNLFLLPIY 352
Query: 123 SFVVIPAGLIAILLMILSL 141
S +VI G +A+LL ++
Sbjct: 353 SIIVI-LGNVALLLCGFNI 370
>gi|151221702|ref|YP_001332524.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus str. Newman]
gi|258450584|ref|ZP_05698646.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus A5948]
gi|262051246|ref|ZP_06023470.1| hypothetical protein SA930_1677 [Staphylococcus aureus 930918-3]
gi|282920136|ref|ZP_06327861.1| DNA internalization competence protein Com/Rec2 [Staphylococcus
aureus A9765]
gi|150374502|dbj|BAF67762.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus str. Newman]
gi|257861742|gb|EEV84541.1| DNA internalization competence protein ComEC/Rec2 [Staphylococcus
aureus A5948]
gi|259160883|gb|EEW45903.1| hypothetical protein SA930_1677 [Staphylococcus aureus 930918-3]
gi|282594484|gb|EFB99469.1| DNA internalization competence protein Com/Rec2 [Staphylococcus
aureus A9765]
gi|302751417|gb|ADL65594.1| competence protein ComEC [Staphylococcus aureus subsp. aureus str.
JKD6008]
Length = 733
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLVITKQIKIKSIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 VFIISVYYIFWLLAKR 442
>gi|57651980|ref|YP_186484.1| competence protein ComEC/Rec2, putative [Staphylococcus aureus
subsp. aureus COL]
gi|57286166|gb|AAW38260.1| competence protein ComEC/Rec2, putative [Staphylococcus aureus
subsp. aureus COL]
Length = 715
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + F+ I Y I S
Sbjct: 233 TNYAPSAVRAIIMTTLVLVITKQIKIKSIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 292
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 293 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 350
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 351 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 408
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 409 VFIISVYYIFWLLAKR 424
>gi|329314263|gb|AEB88676.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus T0131]
Length = 726
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLVITKQIKIKSIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 419
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 420 VFIISVYYIFWLLAKR 435
>gi|320144064|gb|EFW35833.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus MRSA177]
Length = 726
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLVITKQIKIKSIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 419
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 420 VFIISVYYIFWLLAKR 435
>gi|269941077|emb|CBI49461.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
Length = 733
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLVITKQIKIKSIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 VFIISVYYIFWLLAKR 442
>gi|148653535|ref|YP_001280628.1| ComEC/Rec2-like protein [Psychrobacter sp. PRwf-1]
gi|148572619|gb|ABQ94678.1| ComEC/Rec2-related protein [Psychrobacter sp. PRwf-1]
Length = 1035
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 38/109 (34%)
Query: 29 PAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
+ F +F + ++ + P + + +
Sbjct: 538 VLWQAGFWLSFIAVAALVAYGQRWQVSPSSRQEVGRATNTGVLQRLRVTLKAHFVALFKL 597
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ S + + F +P++G + N+ AI + +V++P L+A +L
Sbjct: 598 QMWMSVALLPLSLWLFGKVPLWGFVINLFAIGLFGWVIVPLNLLAGILY 646
>gi|87162384|ref|YP_494242.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|161509816|ref|YP_001575475.1| competence protein ComEC [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|294848618|ref|ZP_06789364.1| DNA internalization-like competence protein ComEC/Rec2
[Staphylococcus aureus A9754]
gi|87128358|gb|ABD22872.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|160368625|gb|ABX29596.1| possible competence protein ComEC [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|294824644|gb|EFG41067.1| DNA internalization-like competence protein ComEC/Rec2
[Staphylococcus aureus A9754]
gi|315198715|gb|EFU29043.1| possible competence protein ComEC [Staphylococcus aureus subsp.
aureus CGS01]
Length = 733
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + F+ I Y I S
Sbjct: 251 TNYAPSAVRAIIMTTLVLVITKQIKIKSIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 310
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 311 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 368
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 369 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 426
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 427 VFIISVYYIFWLLAKR 442
>gi|21674189|ref|NP_662254.1| ComEC/Rec2 family protein [Chlorobium tepidum TLS]
gi|21647352|gb|AAM72596.1| ComEC/Rec2 family protein [Chlorobium tepidum TLS]
Length = 729
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 60/221 (27%), Gaps = 16/221 (7%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+I +K P + + + L P PG F + I Y + +
Sbjct: 336 TIGRKSYPVNSLAAADLLILLFDPFDLLTPG-----FLMTNGAVLGILTIYPHLSGVVAH 390
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + F + ++G S + +F G+ AN+ + +
Sbjct: 391 GKGV------LRPLAHFFWSAF--SVGFSAMIGVSPVIAWYFGTFSPSGIAANLPVV-LF 441
Query: 123 SFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
S + + A L + ++ + + + A S R
Sbjct: 442 STLAMYASFPMFLFHGFASGIASLFGAASWFFAGLALSCAELFSRLPLASVEVRPGLFDV 501
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ F + N + + + + + P
Sbjct: 502 AVFYLTFAFAFYAIVNRAWGRLALFVLVGMNMLLWHQVLRP 542
>gi|32476106|ref|NP_869100.1| competence protein ComEC/Rec2 [Rhodopirellula baltica SH 1]
gi|32446650|emb|CAD76486.1| probable competence protein ComEC/Rec2 [Rhodopirellula baltica SH
1]
Length = 869
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/206 (10%), Positives = 60/206 (29%), Gaps = 20/206 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + + P + + I + P+ +F + ++ + +
Sbjct: 368 LARPHHPLNSLSLAAIILMIWMPAE-----IFGIGVQLSFLAVATLLMCGRPFSSALTPA 422
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGT-------------YGSASASIFLIKHFHCIPVY 110
+ ++ + + R + A + FH +
Sbjct: 423 AETIRVEERFDELARQSQTAWRRLFSFCLSWTGRVLWYSGAVTLMALPLVWSQFHVVSPI 482
Query: 111 GLIANILAIPILSFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+I N++ P+++ + + + + SL IP GV L I+ + +
Sbjct: 483 SVIVNVMLSPLMALALSAGVMTILAGWWLPSLAWIPGGVCGKLLSIMQWMIDSAATLPGG 542
Query: 170 -FCIGRIPETSFVTIVVEFLLMVFCK 194
F + P V + + +
Sbjct: 543 HFWLPSPPTIWIVVFYLGLIAWAAIR 568
>gi|320140526|gb|EFW32380.1| ComEC/Rec2-related protein [Staphylococcus aureus subsp. aureus
MRSA131]
Length = 619
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 11/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
Y P I L + F+ I Y I S
Sbjct: 244 TNYAPSAVRAIIMTTLVLVITKQIKIKSIQLLAFAFIIMFILNPLVVYDIGFQFSFIISF 303
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++Q + I ++ I I FH + G ++N++ +P S +
Sbjct: 304 FIMLL--FPFLQQLSKLQSLFIITFIAQLASFIVAIPSFHQLQWVGFLSNLIFVPYYSII 361
Query: 126 VIPAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 362 LFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFI 419
Query: 182 TIVVE---FLLMVFCK 194
++ ++ +
Sbjct: 420 VFIISVYYIFWLLAKR 435
>gi|229495441|ref|ZP_04389176.1| competence protein [Porphyromonas endodontalis ATCC 35406]
gi|229317884|gb|EEN83782.1| competence protein [Porphyromonas endodontalis ATCC 35406]
Length = 536
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 56/178 (31%), Gaps = 21/178 (11%)
Query: 16 TIEGIARLSPPSGPAFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+ I L PG +FD F Y + +I + + +
Sbjct: 338 ALSAIVLL-----LYHPGYIFDVGFQLSYAALLSILLY---------EPFFALYAQRLSH 383
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + + + ++ HF L +N+ + + ++IP L+
Sbjct: 384 PLARYIYLSLSVCLS--AQILTLPLVLYHFGSSSALFLWSNLPLMLLA-TLLIPLALLYA 440
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+L L + F +++ G++ + H ++ + + G + +
Sbjct: 441 ILASLG---VAFPLLSQGVEALTHGLYQAASLFDSVEGGVFSLRLSGAEALGLTAFLL 495
>gi|67458413|ref|YP_246037.1| ComEC/Rec2-related protein [Rickettsia felis URRWXCal2]
gi|67003946|gb|AAY60872.1| ComEC/Rec2-related protein [Rickettsia felis URRWXCal2]
Length = 300
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
I +A+L P PG +DF F +Y I A GY S P++I +E++
Sbjct: 163 IRVNDRITLLAKLYKPQNAILPGGYDFGFYAY---IGANGYAMSQPQIIERNETNFD--- 216
Query: 71 KKISSIKQSFLNEIRANIG-TYGSASASIF 99
I ++ N + +G G+ +A+I
Sbjct: 217 SFIYRVRIFIYNNLIEKLGKDKGNFAAAIL 246
>gi|284007584|emb|CBA73149.1| competence protein ComEC [Arsenophonus nasoniae]
Length = 772
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 68/187 (36%), Gaps = 14/187 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++A+ +++S K+ + + ++ + ++
Sbjct: 346 SFWLSSFAVTALIFWFSFVKL------SVQFQYNWLNWLNWLNWLAKLVHLQLGMLILLI 399
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDII 156
+ F I + AN+ A+PI+SF+ IP +++ + + S+ N+ F ++ + ++
Sbjct: 400 PIQLILFQGINIASFWANLWAVPIISFITIPLIMVSYICIFWHSVQNLLFDIIDKSISLV 459
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ N + ++ ++ + IT++I ++
Sbjct: 460 LW------PLPNIERYW-LDSGHLPILITGVSWLIILCWQFGWFFQYKLLITLLIYWSIT 512
Query: 217 YSFSPDL 223
DL
Sbjct: 513 TLKQNDL 519
>gi|325202503|gb|ADY97957.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis M01-240149]
Length = 691
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 311 QTALRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVAIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 353 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 389
>gi|261392926|emb|CAX50511.1| competence protein ComA [Neisseria meningitidis 8013]
Length = 691
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 311 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 353 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 389
>gi|240170820|ref|ZP_04749479.1| hypothetical protein MkanA1_16012 [Mycobacterium kansasii ATCC
12478]
Length = 527
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 15/215 (6%), Positives = 56/215 (26%), Gaps = 20/215 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+++ PA + + + P D F+ + + + +
Sbjct: 323 SRRRQAIPALSASVLVLMATAPQLAV-----DMGFALSVVATAGLVVIAPLWSRRLVARG 377
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ + + G + + AN+ +++
Sbjct: 378 LPKPLADALAVAAAAQVVTAPLVAAISG-------------RFSLVAVFANLAVTAVIAP 424
Query: 125 VVIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVT 182
+ + A+L ++ + + ++ +AH + + P + +
Sbjct: 425 ITVLGSAAALLAVLWPAGAQLLIRFTGPEMWWVLRVAHWAAGVPMATVPVPEGPAGALLV 484
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
V L + + + + + +
Sbjct: 485 GGVTVLAVALWRFRWFRLATSWALVAALGCLLAWS 519
>gi|282919363|ref|ZP_06327098.1| late competence protein ComEC [Staphylococcus aureus subsp. aureus
C427]
gi|282317173|gb|EFB47547.1| late competence protein ComEC [Staphylococcus aureus subsp. aureus
C427]
Length = 438
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 51/134 (38%), Gaps = 9/134 (6%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ ++Q + I ++ I I +FH + G ++N++ +P S ++
Sbjct: 16 FIMLLFPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILF 75
Query: 128 PAGLIAILLMILSLD-NIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
P ++ + + ++ D ++ + RI +H F + + + F+
Sbjct: 76 PLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSH--FSVPKFNDWIFIIF 133
Query: 184 VVE---FLLMVFCK 194
++ ++ +
Sbjct: 134 IISVYYIFWLLAKR 147
>gi|269215625|ref|ZP_06159479.1| DNA internalization-related competence protein ComEC/Rec2 [Slackia
exigua ATCC 700122]
gi|269131112|gb|EEZ62187.1| DNA internalization-related competence protein ComEC/Rec2 [Slackia
exigua ATCC 700122]
Length = 755
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 31/268 (11%), Positives = 81/268 (30%), Gaps = 22/268 (8%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+ P + I + L S Y S +G +P ++
Sbjct: 292 RRRPSSLSSLAAAICIMLAADAYGATSL-----SLYLSAASTLGIIVLMPLASSWIDTAL 346
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+K + + A FH +P+ ++N++A P+ +F+V
Sbjct: 347 RGRFK---------GASDAIALTACANVLAMPANASLFHRVPLISPLSNVVAAPVFAFLV 397
Query: 127 IPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ + + L ++ +++ ++ + +S +P +
Sbjct: 398 VGGMASLAVDAVFPRLGHMMLHALSYAAELFVSGMRALSHLPYASVFCSVPLGVSAAASI 457
Query: 186 EFL--LMVFCKTNIRHIGSIM--IGITIIILFTFPYSFSPDLLIS---EKGNLVALVDKN 238
L R I I + +L P F+ D +++ +G+ + + +
Sbjct: 458 GAFCALWALWPLPTRRNACICGGIALACCLLVLAPGRFAGDRIVALDVGQGDAILVQSEG 517
Query: 239 TLISNYSNPPSFIFSQWKSALITPFHEA 266
+ + + + + +A
Sbjct: 518 SALLVDTGNQDSLLAASLGRAGVSHLDA 545
>gi|254229016|ref|ZP_04922437.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
sp. Ex25]
gi|262394759|ref|YP_003286613.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. Ex25]
gi|151938484|gb|EDN57321.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
sp. Ex25]
gi|262338353|gb|ACY52148.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. Ex25]
Length = 752
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 38/124 (30%), Gaps = 17/124 (13%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+ +F Y + A+ + ++ + ++
Sbjct: 326 ASYSMSFWLSYLSVCAVLFAINLVRHQNGGWKAK---------------LKVLLLTQLML 370
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMA 150
SA +F + + N+ IP F+V+P +A+ + + + ++
Sbjct: 371 SALIVPISGYYFSGFSLSSIAYNLAFIPWFGFIVVPLMFLALFSSLFLEMIAKPLWQLVD 430
Query: 151 WGLD 154
W L
Sbjct: 431 WSLQ 434
>gi|254258746|ref|ZP_04949800.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 1710a]
gi|254217435|gb|EET06819.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei 1710a]
Length = 531
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 51/182 (28%), Gaps = 34/182 (18%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ P G L P G F + ++AI S + +
Sbjct: 353 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILAVSSGWRAPRDLDET 407
Query: 64 --------------------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
W W + + + A + + +
Sbjct: 408 RGARHALGGVGHEGAPPSHRARWRAACGFAWGWAARAFRRLARRVRDAARAQFAVTIALA 467
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F IP+ G +AN AIP + +V P L I+L LD + + + ++
Sbjct: 468 PLTALWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYALAHALVQALM 526
Query: 158 HI 159
+
Sbjct: 527 RL 528
>gi|325129838|gb|EGC52645.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis OX99.30304]
Length = 691
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 311 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 353 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 389
>gi|218667263|ref|YP_002424980.1| DNA internalization-related competence protein ComEC/Rec2
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519476|gb|ACK80062.1| DNA internalization-related competence protein ComEC/Rec2
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 736
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 39/341 (11%), Positives = 91/341 (26%), Gaps = 29/341 (8%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGSASASIFLIKH 103
++A+ + P + + + R + S + L
Sbjct: 349 LAALLIAFGNPGALVDVGFWLSLGAVAVLVAIGYGEGGWRTLLRSQWMVSIALMPLLAGL 408
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIA 160
F + + IAN+L IP++ + +P L+ + L + F ++A +D + +
Sbjct: 409 FGQVSLISPIANVLVIPLVEMLAVPLALLGAFFALLDLELLSRLLFHLVALEMDAVTALL 468
Query: 161 HRISVAHNEFCIGRIP-ETSFVTIVVEFLLMVFCKTN----IRHIGSIMIGI-------- 207
+ + + + V+ + + +G + + I
Sbjct: 469 RILLHIPFARVSTGMGRTWALLAAVLGLGIFFLPPGWPGRLLALLGMVPLLIPAGGTADL 528
Query: 208 ------TIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF--SQWKSAL 259
+ F S + S A +L + + W +
Sbjct: 529 ELRALDAGSGMLLFWQKGSQSGIFSANLWKAASRRSGSLALTAALRQQGVTRVDAWLRSD 588
Query: 260 ITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV---IVGVLK 316
I+ P ++ + S R + V IV
Sbjct: 589 ISAPQPLPVAARQWWPAGARDYPGGPPTSAFCRTDGGTPAEMHFLTLNAPVQPCIVTWGA 648
Query: 317 RKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQ 357
D++ L + + + + L + P L
Sbjct: 649 GPDVLILGDADAATVHRLVAEHGAALHRAQAIFAPASLGNT 689
>gi|325203789|gb|ADY99242.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis M01-240355]
Length = 691
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 311 QTALRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVAIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 353 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 389
>gi|294665030|ref|ZP_06730337.1| competence protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292605187|gb|EFF48531.1| competence protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 848
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 47/160 (29%), Gaps = 24/160 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + T +
Sbjct: 373 GFWLSFAGVAWLVWCLPSDDRA---------------------IVRGYLSAQTVATVGLL 411
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F + G AN++AIP +FVV+P L+ L + + + W ++
Sbjct: 412 PLTVSLFGQASLVGPFANVVAIPWWTFVVVPLCLLGTALEAIYPGTGVWAWQLAGWCFEL 471
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCK 194
+ + + + + ++ ++ +
Sbjct: 472 TWPGFVWLGQTAVALWWVPESDGVALIAALLGAFWLLLPR 511
>gi|198282783|ref|YP_002219104.1| ComEC/Rec2-like protein [Acidithiobacillus ferrooxidans ATCC 53993]
gi|198247304|gb|ACH82897.1| ComEC/Rec2-related protein [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 700
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 39/341 (11%), Positives = 91/341 (26%), Gaps = 29/341 (8%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGSASASIFLIKH 103
++A+ + P + + + R + S + L
Sbjct: 313 LAALLIAFGNPGALVDVGFWLSLGAVAVLVAIGYGEGGWRTLLRSQWMVSIALMPLLAGL 372
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIA 160
F + + IAN+L IP++ + +P L+ + L + F ++A +D + +
Sbjct: 373 FGQVSLISPIANVLVIPLVEMLAVPLALLGAFFALLDLELLSRLLFHLVALEMDAVTALL 432
Query: 161 HRISVAHNEFCIGRIP-ETSFVTIVVEFLLMVFCKTN----IRHIGSIMIGI-------- 207
+ + + + V+ + + +G + + I
Sbjct: 433 RILLHIPFARVSTGMGRTWALLAAVLGLGIFFLPPGWPGRLLALLGMVPLLIPAGGTADL 492
Query: 208 ------TIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF--SQWKSAL 259
+ F S + S A +L + + W +
Sbjct: 493 ELRALDAGSGMLLFWQKGSQSGIFSANLWKAASRRSGSLALTAALRQQGVTRVDAWLRSD 552
Query: 260 ITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV---IVGVLK 316
I+ P ++ + S R + V IV
Sbjct: 553 ISAPQPLPVAARQWWPAGARDYPGGPPTSAFCRTDGGTPAEMHFLTLNAPVQPCIVTWGA 612
Query: 317 RKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQ 357
D++ L + + + + L + P L
Sbjct: 613 GPDVLILGDADAATVHRLVAEHGAALHRAQAIFAPASLGNT 653
>gi|167837150|ref|ZP_02464033.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis MSMB43]
Length = 368
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 63/229 (27%), Gaps = 46/229 (20%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF------------- 52
+ P G L P G F + ++AI +
Sbjct: 146 RSLAPSSVLAAALGCVLLVDPWAVTSAG-----FWLSFCAVAAILFVSSERSAARDACDA 200
Query: 53 --------------------------YSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA 86
+ WT + ++ + A
Sbjct: 201 RDIVGAHDLRRLIEGAGGERMSPSSHRERWRAARGRAWIAAWTGARRAAGRLVQRLRDAA 260
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ + + + F IP+ G +AN AIP + +V P L ++L LD +
Sbjct: 261 RAQFAVTIALAPLTVLWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGVVL-PAPLDASAY 319
Query: 147 GVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCK 194
+ + ++ + ++ A + + + T V + + +
Sbjct: 320 ALAHALVATLMRLLDAVAGAGRTVWMLPTPGGFALATAAVGVVWALTPR 368
>gi|207743541|ref|YP_002259933.1| dna translocation competence protein coma (n-terminal fragment)
[Ralstonia solanacearum IPO1609]
gi|206594939|emb|CAQ61866.1| probable dna translocation competence protein coma (n-terminal
fragment) [Ralstonia solanacearum IPO1609]
Length = 507
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/166 (12%), Positives = 40/166 (24%), Gaps = 11/166 (6%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + L P G F + ++ I +
Sbjct: 353 DRSVPASLSLCWAAAVVALVDPWAVMSAG-----FWLSFGAVAVIFLATRMAAADAGGND 407
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + A I + + F + V AN LAIP++S
Sbjct: 408 RQSTWPR-----RAWRALCGGARIQLAVTFGLLPLTLLLFQQVSVVSAAANALAIPVVSL 462
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
V P LI L ++ ++
Sbjct: 463 VTTPLALIGAAL-PERWAQPVLAWAEASFGWLVSWLDGLAAPAWSV 507
>gi|84623835|ref|YP_451207.1| competence protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84367775|dbj|BAE68933.1| competence protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 802
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 39/113 (34%), Gaps = 3/113 (2%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDN 143
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 400 LSAQTVATVGLLPLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLVGTALEAIYPGAGV 459
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + W ++ + + + + + ++ ++ +
Sbjct: 460 WAWQLAGWCFELTWPGFVWLGRTTVALWWVPESDGVALIAALLGAFWLLLPRG 512
>gi|238028006|ref|YP_002912237.1| DNA internalization-related competence protein ComEC/Rec
[Burkholderia glumae BGR1]
gi|237877200|gb|ACR29533.1| DNA internalization-related competence protein ComEC/Rec
[Burkholderia glumae BGR1]
Length = 864
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 27/253 (10%), Positives = 64/253 (25%), Gaps = 44/253 (17%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM------- 58
+ P G ++ P PG F + ++ I + S ++
Sbjct: 349 RTVAPSTTLAFALGCVLIADPWAVLAPG-----FWLSFCAVAVILFAVSGRRVRRSVRGD 403
Query: 59 --------IYSSESHNTWTWKKISSIKQSFLNEIRAN--------------------IGT 90
+ + + S ++ + +RA
Sbjct: 404 PDFAAAGEPERTATGMPASPPAASPVRSALAAVMRAARRVLRERLRRAGPRFVAGVRTQY 463
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+ + + F IP+ G AN +AIP +S +V P L + L A
Sbjct: 464 AVTLGLAPLTVVWFGQIPLGGAPANAVAIPWVSLLVTPLVLAGVALPAPLDALALRAARA 523
Query: 151 WGLDIIIHIAHRISVAHNEFCI--GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
+ + + + V + + + + + +
Sbjct: 524 LLAVL--FAGFDAAGMDGRTMLWMPSPHWPALVAACIGMGWALMPRGWPLRCAAPLACLP 581
Query: 209 IIILFTFPYSFSP 221
++ +
Sbjct: 582 FVLPPSQAPPPGA 594
>gi|296876841|ref|ZP_06900889.1| competence protein [Streptococcus parasanguinis ATCC 15912]
gi|296432343|gb|EFH18142.1| competence protein [Streptococcus parasanguinis ATCC 15912]
Length = 590
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 55/187 (29%), Gaps = 11/187 (5%)
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ + S L +F + L L + V++P + +L
Sbjct: 349 SYSGLKKLLVESFWISLGILPLLTYYFSVFQPWSLPLTFLFSFLFDLVLLPGLTVLFILS 408
Query: 138 ---ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
L++ N F ++ + I +++ F P + +++ L +
Sbjct: 409 ILKPLTIFNSFFLLIEECIRWI----SKLTSLPLVFGQPTGPALIALFLLLGILYDFRKQ 464
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF-- 252
R + MI + + + I +G+ + L D F
Sbjct: 465 KKRRFLLIGMILLIFCWTKHPLENEITMVDI-GQGDSIFLRDWKGRTILIDVGGRVTFKS 523
Query: 253 -SQWKSA 258
+W+
Sbjct: 524 GDKWQER 530
>gi|187778450|ref|ZP_02994923.1| hypothetical protein CLOSPO_02044 [Clostridium sporogenes ATCC
15579]
gi|187772075|gb|EDU35877.1| hypothetical protein CLOSPO_02044 [Clostridium sporogenes ATCC
15579]
Length = 595
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 53/158 (33%), Gaps = 21/158 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+KYD + + I L+ P D F + I + I
Sbjct: 256 RKYDSLSSISLAAIIILLNKPHYIL-----DIGFMLSFLSTLGILLYNKKISRI------ 304
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + Q + + + F+ + +I N++ +P+ + +
Sbjct: 305 -------LYKLPQRINSCVSLTLS--SQIYTFPFMCFTIKSFGLGFIIGNLILVPLYAPI 355
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
V+ L IL+ I L I ++ L +++ AH +
Sbjct: 356 VLLGNLAMILIKIPFLFKIINKIIYIFL-MMVEGAHYL 392
>gi|313668818|ref|YP_004049102.1| competence protein [Neisseria lactamica ST-640]
gi|313006280|emb|CBN87743.1| competence protein [Neisseria lactamica 020-06]
Length = 691
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 258 RGRLPAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKQ 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 311 QTALRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVAIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 353 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 389
>gi|327481329|gb|AEA84639.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas stutzeri DSM 4166]
Length = 741
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 51/145 (35%), Gaps = 21/145 (14%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
F + ++ + + S +W+ ++ ++ + +
Sbjct: 327 QPGFWLSFGAVAV----------LALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALG 376
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLD 154
I G +AN+LA+P +S + +P L+ LL+ + + V+ + L
Sbjct: 377 LP---------ISASGPLANLLAVPWVS-LTVPFALLGTLLLPVAGVGEALLSVVGYSLA 426
Query: 155 IIIHIAHRISVAHNEFCIGRIPETS 179
++ + I+ + +P +
Sbjct: 427 LLFDVLAAIANWQPAWIAVGLPVWA 451
>gi|325133784|gb|EGC56440.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis M13399]
Length = 691
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 311 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 353 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 389
>gi|58581923|ref|YP_200939.1| competence protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58426517|gb|AAW75554.1| competence protein [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 807
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 39/113 (34%), Gaps = 3/113 (2%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDN 143
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 405 LSAQTVATVGLLPLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLVGTALEAIYPGAGV 464
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + W ++ + + + + + ++ ++ +
Sbjct: 465 WAWQLAGWCFELTWPGFVWLGRTTVALWWVPESDGVALIAALLGAFWLLLPRG 517
>gi|291514741|emb|CBK63951.1| ComEC/Rec2-related protein [Alistipes shahii WAL 8301]
Length = 290
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 15/158 (9%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D +F + ++AI + + + K + IG +A+
Sbjct: 132 DISFQLSFVAVAAILAW------------GVPLCRRCRTRWKGVNVVVDAYLIGFVATAA 179
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWGLD 154
+ + F +P+ GL N LAI + VV L +L + F V +
Sbjct: 180 TAPLVSHTFGVVPLAGLAVNPLAIALAGVVVFGGALW--MLAPVGFLAPAFGFVTGSAAE 237
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I +A + + + F L
Sbjct: 238 GISALARLTASLPGGTADYTLGGWPTAAVYAVFALATL 275
>gi|237796422|ref|YP_002863974.1| ComEC/Rec2 family protein [Clostridium botulinum Ba4 str. 657]
gi|229263766|gb|ACQ54799.1| ComEC/Rec2 family protein [Clostridium botulinum Ba4 str. 657]
Length = 595
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 54/158 (34%), Gaps = 21/158 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+KYD + + I L+ P +FD F + I +
Sbjct: 256 RKYDSLSSISLAAIIILLNKPYY-----IFDIGFMLSFLSTLGILLYNKK---------- 300
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + Q + + + ++ + +I N++ +P+ + +
Sbjct: 301 ---ISRTLYKLPQRINSCVSLTLS--SQIYTFPYMCFTIQSFGLGFIIGNLVLVPLYAPI 355
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
V+ L +L+ I + I ++ L I+I A +
Sbjct: 356 VLLGNLAMLLIKIPFVFKIINKIIYIFL-IMIEGAQYL 392
>gi|168181655|ref|ZP_02616319.1| ComEC/Rec2 family protein [Clostridium botulinum Bf]
gi|182675112|gb|EDT87073.1| ComEC/Rec2 family protein [Clostridium botulinum Bf]
Length = 595
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 54/158 (34%), Gaps = 21/158 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+KYD + + I L+ P +FD F + I +
Sbjct: 256 RKYDSLSSISLAAIIILLNKPYY-----IFDIGFMLSFLSTLGILLYNKK---------- 300
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + Q + + + ++ + +I N++ +P+ + +
Sbjct: 301 ---ISRTLYKLPQRINSCVSLTLS--SQIYTFPYMCFTIQSFGLGFIIGNLVLVPLYAPI 355
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
V+ L +L+ I + I ++ L I+I A +
Sbjct: 356 VLLGNLAMLLIKIPFVFKIINKIIYIFL-IMIEGAQYL 392
>gi|121634499|ref|YP_974744.1| competence protein [Neisseria meningitidis FAM18]
gi|120866205|emb|CAM09945.1| competence protein [Neisseria meningitidis FAM18]
gi|325137895|gb|EGC60470.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis ES14902]
gi|325141926|gb|EGC64366.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis 961-5945]
gi|325197921|gb|ADY93377.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis G2136]
Length = 691
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 52/174 (29%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 311 QTAVRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + + L ++ +A EF + P
Sbjct: 353 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 402
>gi|188576504|ref|YP_001913433.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520956|gb|ACD58901.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas oryzae pv. oryzae PXO99A]
Length = 776
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 39/113 (34%), Gaps = 3/113 (2%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDN 143
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 374 LSAQTVATVGLLPLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLVGTALEAIYPGAGV 433
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + W ++ + + + + + ++ ++ +
Sbjct: 434 WAWQLAGWCFELTWPGFVWLGRTTVALWWVPESDGVALIAALLGAFWLLLPRG 486
>gi|294624867|ref|ZP_06703524.1| competence protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292600826|gb|EFF44906.1| competence protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 848
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 47/160 (29%), Gaps = 24/160 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + T +
Sbjct: 373 GFWLSFAGVAWLVWCLPSDDRA---------------------IVRGFLSAQTVATVGLL 411
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F + G AN++AIP +FVV+P L+ L + + + W ++
Sbjct: 412 PLTVSLFGQASLVGPFANVVAIPWWTFVVVPLCLLGTALEAIYPGTGVWAWQLAGWCFEL 471
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCK 194
+ + + + + ++ ++ +
Sbjct: 472 TWPGFVWLGQTAVALWWVPESDGVALIAALLGAFWLLLPR 511
>gi|225025258|ref|ZP_03714450.1| hypothetical protein EIKCOROL_02155 [Eikenella corrodens ATCC
23834]
gi|224942016|gb|EEG23225.1| hypothetical protein EIKCOROL_02155 [Eikenella corrodens ATCC
23834]
Length = 758
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 34/287 (11%), Positives = 89/287 (31%), Gaps = 12/287 (4%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
P+ A + L P F + ++A+ + + +
Sbjct: 304 RGSPAPWRAWWQALAVVLLFDPLSALG-----VGFWFSFGAVAALIWVAQG--RLEAMPD 356
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + K S I + + F +P+ +AN L IP S+
Sbjct: 357 DDALEGGWLRTAKHSGKWRIALRAQYAATLLGFWQAGQVFGTVPLAAPLANALLIPWFSW 416
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V++P L+A+LL + + + + ++ + P +
Sbjct: 417 VLVPLALLAVLLPFEGYLKMAAAISEYTMGAVVWAGGIV---PTGALAHLPPLFWLAVLA 473
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA--LVDKNTLIS 242
+ ++ +R ++++ + + P + + I + G +A + +N +
Sbjct: 474 ALAVWLLPRGLGLRPWAALVLAASCLYRTPAPEHGTAAVRIVDVGQGLALQVRTQNHWLL 533
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSM 289
+ +Q L+ P V + + +++
Sbjct: 534 FDTGTAGAAQTQLVPNLLAQGLPPPDVLVLSHHDADHDGGFPAVQAA 580
>gi|163802113|ref|ZP_02196009.1| Rec2-related protein [Vibrio sp. AND4]
gi|159174254|gb|EDP59062.1| Rec2-related protein [Vibrio sp. AND4]
Length = 752
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 74/236 (31%), Gaps = 32/236 (13%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P+ I P F +F Y S+ ++ +
Sbjct: 306 WSPWQVLLLAVSIQLFIEPFA-----SFTLSFWLSY---------LSVVAVLLAVNVVQH 351
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + ++ + F + + N++ IP F+V+
Sbjct: 352 PRGSWQTKLSHLLKIQLILTFLIIPISGVF------FSGTSLVSIAYNLIFIPFFGFLVV 405
Query: 128 PAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
P +A++ + L + ++ W L + + +P +T+ +
Sbjct: 406 PLIFLALIATPIISQLAEALWQLLDWVLLPLTWSLQFAV---GSWYTLSLP----LTLSM 458
Query: 186 EFLLMVFCKTNI---RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
L + R + I+ +T + +F + + + + + G+ +A++ +
Sbjct: 459 SALALCGLLKRFLSKRALFPIISVVTGVSIFYERGTSAWRVDVLDVGHGLAVLIEK 514
>gi|331270022|ref|YP_004396514.1| ComE operon protein 3 [Clostridium botulinum BKT015925]
gi|329126572|gb|AEB76517.1| ComE operon protein 3 [Clostridium botulinum BKT015925]
Length = 446
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 39/124 (31%), Gaps = 20/124 (16%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K YD A + I + P D F+ + I + K +
Sbjct: 257 KNYDSLSALSLAAIILLIMKPYYVM-----DIGFNLSFLATLGIILYNKKIKRV------ 305
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + + + + + + I ++ ++ N++ +PI S V
Sbjct: 306 -------LYKLPTKINEGLSMTLS--AQVFSMPYAMGTLNNISMFFILGNLILVPIYSMV 356
Query: 126 VIPA 129
++
Sbjct: 357 ILIG 360
>gi|189220411|ref|YP_001941051.1| membrane metal-binding protein comEC [Methylacidiphilum infernorum
V4]
gi|189187269|gb|ACD84454.1| Predicted membrane metal-binding protein comEC [Methylacidiphilum
infernorum V4]
Length = 700
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 49/183 (26%), Gaps = 19/183 (10%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGIS--------AIGYFYS 54
++ +K D L P D Y + G FYS
Sbjct: 331 ALKRKVDALHCWAVSLFAFLLYDPLAIM-----DIGLELSYAVVLSLLLLAKPLFGLFYS 385
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
K+ +++ A + FH + G+
Sbjct: 386 PFKIDPYIPRSLAPFPRRMLDQVGKIGAL-LLAASLAAWLGALPLEVFCFHTLSWVGIFD 444
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA---WGLDIIIHIAHRISVAHNEFC 171
N++A+P+ +V+ L A L D + + + L ++ + + +
Sbjct: 445 NLIAVPLAELIVLLGSLSA--LGGFFSDGLACVLNGINRYFLWALVLVVDFWAKIPSAVL 502
Query: 172 IGR 174
Sbjct: 503 AVP 505
>gi|152984486|ref|YP_001347549.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas aeruginosa PA7]
gi|150959644|gb|ABR81669.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas aeruginosa PA7]
Length = 740
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 17/161 (10%), Positives = 50/161 (31%), Gaps = 20/161 (12%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
F + ++ + + + + W+ ++ ++ +
Sbjct: 326 QAGFWLSFLAVALLLWLF----------AGRLGRWRWWTAWGRAQWGMALGLAMPSLALG 375
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLD 154
+ + G +AN+LA+P + +V+P L LL+ + + + LD
Sbjct: 376 LP---------LSLSGALANLLAVPWVEMLVVPPALAGSLLLGVPGVGESLLWIAGASLD 426
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ H+ ++ + ++ L +
Sbjct: 427 QLFHLLVLLAGLAGAWQPPAATAWGVALGMLGALCWLAPAG 467
>gi|34495926|ref|NP_900141.1| competence protein [Chromobacterium violaceum ATCC 12472]
gi|34330273|gb|AAQ58149.2| competence protein [Chromobacterium violaceum ATCC 12472]
Length = 704
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 55/190 (28%), Gaps = 29/190 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ PF A L P PGL + ++A+ + + +
Sbjct: 261 RRQLSPFQAWWLALAAVLLLDPFSALTPGL-----WLSFGLVAALMFSSLARRQPAAGWR 315
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
++ L F P+ +AN LAIP +S
Sbjct: 316 AAAAGQWAAGI-------------------ASLAPLAAMFGGFPLLSPLANALAIPYVSV 356
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
++ P L+A+ L + ++ ++ +A + + P
Sbjct: 357 LLTPLSLLAVALPWDGGLQLAAWLVRGFYWLVEALAR-----GPAWHVAGTPWPLLALAA 411
Query: 185 VEFLLMVFCK 194
+ ++ +
Sbjct: 412 AGSVWLIAPR 421
>gi|325139920|gb|EGC62450.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis CU385]
Length = 760
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTALRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 422 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 458
>gi|289705020|ref|ZP_06501433.1| putative DNA internalization-related competence protein ComEC/Rec2
[Micrococcus luteus SK58]
gi|289558279|gb|EFD51557.1| putative DNA internalization-related competence protein ComEC/Rec2
[Micrococcus luteus SK58]
Length = 855
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 19/185 (10%), Positives = 47/185 (25%), Gaps = 12/185 (6%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + I + ++ + + +
Sbjct: 371 AFHLSLAATAGIVL------GGAPLDRALHAGLGRVLPDVVARWLSASLAVTVAAHLACQ 424
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDII 156
++ + Y + AN+LA P + V + L A L + + V+ W I
Sbjct: 425 PIILAMTGEVSAYAVPANLLAAPAVPPVTVLGTLAAALALPAPGIAAALVAVIQWPAAWI 484
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+AH + + +++ T + +++
Sbjct: 485 GWVAHTSASLPGALR-----PWPAGALGAGLGVLLVAATLLGFAAVLLLERRRAAPVRRV 539
Query: 217 YSFSP 221
+P
Sbjct: 540 GRSAP 544
>gi|317056554|ref|YP_004105021.1| ComEC/Rec2-like protein [Ruminococcus albus 7]
gi|315448823|gb|ADU22387.1| ComEC/Rec2-related protein [Ruminococcus albus 7]
Length = 651
Score = 46.7 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 76/246 (30%), Gaps = 37/246 (15%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+K D + + P P +F + ++AI
Sbjct: 301 RKSDGLNSLGLSAVLLTFLKPYTAVSP-----SFILSFLAVAAIELVL------------ 343
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF- 124
ISS ++ EI + + F I + L+ N+L +P+ +
Sbjct: 344 -------ISSDHENDKVEITMRLSASVLFMTAPASALLFGGISIMSLLTNLLLVPVCTMS 396
Query: 125 ----VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++ ++ L + + + ++ + +++ + +
Sbjct: 397 LQLCFIVLFTGGTLVSTPLLIAAV------LPVKFVLFCSDKLATLDFSYVFTSSSVIT- 449
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
++V +LMV T + I +++ + L + S + I + L L D+
Sbjct: 450 GIVIVSSVLMVLVCTRSKEIRKLLLCTCTV-LAVWCASANIVRFIDDDYKLTILPDRKRT 508
Query: 241 ISNYSN 246
S
Sbjct: 509 AYMLSR 514
>gi|218767824|ref|YP_002342336.1| competence protein [Neisseria meningitidis Z2491]
gi|121051832|emb|CAM08138.1| competence protein [Neisseria meningitidis Z2491]
Length = 691
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 51/174 (29%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 311 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 353 VLTPLALLGSVVPFAPLQQAAAFLAEYTLRFLVWLA----GVSPEFAVAAAPLP 402
>gi|308388889|gb|ADO31209.1| competence protein [Neisseria meningitidis alpha710]
gi|325136076|gb|EGC58686.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis M0579]
Length = 760
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTALRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 422 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 458
>gi|92117258|ref|YP_576987.1| ComEC/Rec2-related protein [Nitrobacter hamburgensis X14]
gi|91800152|gb|ABE62527.1| ComEC/Rec2-related protein [Nitrobacter hamburgensis X14]
Length = 413
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--I 59
LS+ K P + +E ARL PP P PG +DF Y++GI A G+ K+
Sbjct: 177 LSVKKGTAP-AVGSFVELKARLQPPLTPLRPGSYDFARDMYFQGIGASGFVMGAIKIVNP 235
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ ++ + IR + A A+ L
Sbjct: 236 PRGGGIALRYAALMQEMRDAIDARIRLVLSGDSRAIATALLT 277
>gi|292487832|ref|YP_003530707.1| recombination protein 2 [Erwinia amylovora CFBP1430]
gi|292899059|ref|YP_003538428.1| competence-like protein [Erwinia amylovora ATCC 49946]
gi|291198907|emb|CBJ46017.1| putative competence-related protein (metallo-beta-lactamase
superfamily protein) [Erwinia amylovora ATCC 49946]
gi|291553254|emb|CBA20299.1| Recombination protein 2 [Erwinia amylovora CFBP1430]
Length = 754
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 43/139 (30%), Gaps = 17/139 (12%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
P+ + + P L ++ + +Y + W
Sbjct: 305 QPWQVWSLCIALILFFDPLSLLSDSL-----WLSALAVAGLLLWYHSFPLPARFCRRWRW 359
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ ++ L + FH I + L+AN+ A+P++S V +P
Sbjct: 360 LPLRLLHLQFGMLLLM------------MPLQALLFHGISLSALLANLWAVPLISLVTVP 407
Query: 129 AGLIAILLMILSLDNIPFG 147
L+A+L +
Sbjct: 408 LILVALLCNAVPWIAPLLW 426
>gi|21231567|ref|NP_637484.1| DNA uptake/competence protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768313|ref|YP_243075.1| DNA uptake/competence protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|21113253|gb|AAM41408.1| DNA uptake/competence protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573645|gb|AAY49055.1| DNA uptake/competence protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 796
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 26/290 (8%), Positives = 78/290 (26%), Gaps = 25/290 (8%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + +
Sbjct: 367 GFWLSFAGVAWLVWCLPAD---------------------DRSMLRGFLSAQAVATIGLL 405
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F + G +AN++AIP +FVV+P L+ L + + W ++
Sbjct: 406 PLTVSLFGQASLVGPLANLVAIPWWTFVVVPLALLGTALEAAWPGAGVWAWQLAGWCFEL 465
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILF 213
+ + + + V +V ++ + + + ++ +
Sbjct: 466 TWPAFVWLGRTQVALWWVPESDAIALVAALVGAFWLLMPRGTPAKSVALLLWLPLLWPDR 525
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
P + DL + + G +A++ + + + + + + +
Sbjct: 526 ALPEAGEADLQVLDVGQGLAVLVRTQRHALLFDTGPAVRDGFDAGERVVLPALRALGLRR 585
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
L S + + + + + V +
Sbjct: 586 LDAIVLSHADADHAGGYAAVRAGMPVADTLAPSGAPLDVRRRCQAGQRWE 635
>gi|163857073|ref|YP_001631371.1| DNA internalization-related competence protein ComEC/Rec2
[Bordetella petrii DSM 12804]
gi|163260801|emb|CAP43103.1| DNA internalization-related competence protein ComEC/Rec2
[Bordetella petrii]
Length = 843
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 30/219 (13%), Positives = 61/219 (27%), Gaps = 18/219 (8%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
P L P PG F + A+ + W
Sbjct: 369 SPARILALAAAAVVLFDPWATLAPG-----FWLSF---GAVAVLLRAAASAAPALRRAGW 420
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+ + + + ++ +G + + H + + +AN AIPI+SF+V P
Sbjct: 421 RDRVAALLGEFGRVQMAVTLGLVPLLAHLM------HQVSLGSPLANAFAIPIVSFIVTP 474
Query: 129 AGLIAILLMI---LSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
L+ L + GV+ + D + I AH + +
Sbjct: 475 LALLCAAFGAVPGLGMLARACGVLGHAVFDWTMVPVSWIGSAHWAAVDVAAAPWPLLALA 534
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
V + G+ + + ++ +
Sbjct: 535 VAGVAWALQPPGWPARGAGWLLMLPMLCWRPERPPPGHW 573
>gi|196228137|ref|ZP_03127004.1| hydrolase (metallo-beta-lactamase superfamily)-like protein
[Chthoniobacter flavus Ellin428]
gi|196227540|gb|EDY22043.1| hydrolase (metallo-beta-lactamase superfamily)-like protein
[Chthoniobacter flavus Ellin428]
Length = 480
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 57/154 (37%), Gaps = 7/154 (4%)
Query: 28 GPAFPGLFDFNFSSYYKGI---SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
PG F F+F+ + I + + ++ W+ +
Sbjct: 60 QLFAPG-FQFSFTLVFIIIVLAAPLQRWFDQFAQPDPFLPRLLWSLPVKCRAWCWHKFSV 118
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD-- 142
+ + +F+ +FH ++AN LA+P+ +F V+ GL ++L ++SL
Sbjct: 119 ALGVILASWIGSLLFVAGYFHLFSPGSIVANFLAVPV-AFAVLSLGLCSVLTALVSLKIT 177
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ + +++ + H + N + P
Sbjct: 178 ALFNNANWFVAQMMLSVLHHSANLPNGYIYVENP 211
>gi|254673627|emb|CBA09170.1| competence protein [Neisseria meningitidis alpha275]
gi|325207746|gb|ADZ03198.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis NZ-05/33]
Length = 760
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 422 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 458
>gi|312171953|emb|CBX80210.1| Recombination protein 2 [Erwinia amylovora ATCC BAA-2158]
Length = 754
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 43/139 (30%), Gaps = 17/139 (12%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
P+ + + P L ++ + +Y + W
Sbjct: 305 QPWQVWSLCIALILFFDPLSLLSDSL-----WLSALAVAGLLLWYHSFPLPARFCRRWRW 359
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ ++ L + FH I + L+AN+ A+P++S V +P
Sbjct: 360 LPLRLLHLQFGMLLLM------------MPLQALLFHGISLSALLANLWAVPLISLVTVP 407
Query: 129 AGLIAILLMILSLDNIPFG 147
L+A+L +
Sbjct: 408 LILVALLCNAVPWIAPLLW 426
>gi|309378794|emb|CBX22620.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 740
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 293 RGRLPAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKQ 345
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 346 QTALRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVAIPWFSW 387
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 388 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 424
>gi|329946979|ref|ZP_08294391.1| ComEC/Rec2-like protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328526790|gb|EGF53803.1| ComEC/Rec2-like protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 622
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 60/224 (26%), Gaps = 27/224 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + L P D+ F+ + I S P ++ S
Sbjct: 384 RRAASVPALCAGIIVLLLVDPWQ-----SRDYGFALSVVATAGIVIG-SRPVAVHLSRRL 437
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W + + A+ L+ + ++ + AN+LA P +
Sbjct: 438 PRW-------------SAAAVALPLVAQAACGPILVLLQPSVGLWSVPANLLAEPAAAVA 484
Query: 126 VIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
I L A++ I + ++ +A + + +
Sbjct: 485 TISGLLAALIFPIWPAAATVIVWPALAACSWMVWVAGFFAHLPGATVPWPSGIPGALALG 544
Query: 185 ---VEFLLMVFCKT----NIRHIGSIMIGITIIILFTFPYSFSP 221
LL+ T R + + P +P
Sbjct: 545 ACEAGVLLLAAPGTHRALRERLRRFARSAHGRLAPWQRPEPPAP 588
>gi|254670509|emb|CBA06267.1| competence protein [Neisseria meningitidis alpha153]
Length = 760
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 52/174 (29%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + + L ++ +A EF + P
Sbjct: 422 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 471
>gi|188991452|ref|YP_001903462.1| Competence-related DNA-transformation transporter, probable
[Xanthomonas campestris pv. campestris str. B100]
gi|167733212|emb|CAP51410.1| Competence-related DNA-transformation transporter, probable
[Xanthomonas campestris pv. campestris]
Length = 796
Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 26/290 (8%), Positives = 78/290 (26%), Gaps = 25/290 (8%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + +
Sbjct: 367 GFWLSFAGVAWLVWCLPAD---------------------DRSMLRGFLSAQAVATIGLL 405
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
+ F + G +AN++AIP +FVV+P L+ L + + W ++
Sbjct: 406 PLTVSLFGQASLVGPLANLVAIPWWTFVVVPLALLGTALEAAWPGAGVWAWQLAGWCFEL 465
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILF 213
+ + + + V +V ++ + + + ++ +
Sbjct: 466 TWPAFVWLGRTQVALWWVPESDAIALVAALVGAFWLLMPRGTPAKSVALLLWLPLLWPDR 525
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
P + DL + + G +A++ + + + + + + +
Sbjct: 526 ALPEAGEADLQVLDVGQGLAVLVRTQRHALLFDTGPAVRDGFDAGERVVLPALRALGLRR 585
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
L S + + + + + V +
Sbjct: 586 LDAIVLSHADADHAGGYAAVRAGMPVADTLAPSGAPLDVRRRCQAGQRWE 635
>gi|257454428|ref|ZP_05619690.1| putative competence protein, ComEC [Enhydrobacter aerosaccus SK60]
gi|257448194|gb|EEV23175.1| putative competence protein, ComEC [Enhydrobacter aerosaccus SK60]
Length = 953
Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 44/127 (34%), Gaps = 13/127 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSE----SHNTWTWKKISSIKQSFLN-----EIRA 86
F + + + F + ++E S + + +
Sbjct: 463 QAGFWLSFVAVVLLLKFSETIGTVSAAEINNVSQLLAPTARSEVLSGFVKIISHQFKALL 522
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNI 144
+ + ++ F + V G++ N+LA+P L VV+P ++A ++ + + D +
Sbjct: 523 KLQIWLFVWMLPIVVWFFGKVSVIGILVNLLAVPFLGLVVVPLDMLAGVVSWLPVVGDWL 582
Query: 145 --PFGVM 149
M
Sbjct: 583 SQIIWSM 589
>gi|304388000|ref|ZP_07370172.1| competence factor transporting permease/ATP-binding protein ComA
[Neisseria meningitidis ATCC 13091]
gi|304337999|gb|EFM04137.1| competence factor transporting permease/ATP-binding protein ComA
[Neisseria meningitidis ATCC 13091]
Length = 760
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 422 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 458
>gi|161869643|ref|YP_001598810.1| competence protein [Neisseria meningitidis 053442]
gi|161595196|gb|ABX72856.1| competence protein [Neisseria meningitidis 053442]
Length = 739
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 306 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 358
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 359 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 400
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 401 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 437
>gi|254804585|ref|YP_003082806.1| competence protein ComA [Neisseria meningitidis alpha14]
gi|254668127|emb|CBA04719.1| competence protein ComA [Neisseria meningitidis alpha14]
gi|325143911|gb|EGC66221.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis M01-240013]
gi|325206455|gb|ADZ01908.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis M04-240196]
Length = 760
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 48/157 (30%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 422 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 458
>gi|313115850|ref|ZP_07801283.1| hypothetical protein HMPREF9436_03172 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310621827|gb|EFQ05349.1| hypothetical protein HMPREF9436_03172 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 364
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 28/284 (9%), Positives = 75/284 (26%), Gaps = 13/284 (4%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+Y + W +K + + + + + + V
Sbjct: 19 WYRQFWKNAKNPVKRPWYFKLPERLWGLAESICISFCASVATFPVLVLRGLSVSIYAVVS 78
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
+A + I + + + ++ + L + A ++ A IS
Sbjct: 79 SVAVLWLIQPMMLLGLGTAFAGLVPALAPLYGVLSAASAALTGLLDRWAVWISAKPGAGI 138
Query: 172 IGRIPETSFVTIVVEFL-LMVF-CKTNIRHIGSIMIGITIIIL----FTFPYSFSPDLLI 225
+ V +V+ L + F + +R G ++ + + DL+
Sbjct: 139 YFDTAYAAIVCLVLILLCWLAFHWRVRLRVAGPCILLAAAVSIGLGNALSRDVVHIDLVG 198
Query: 226 SEKGNLVALVDKNTLISNYSNPPSF--IFSQWKSALITPFHEAPHVQKEDLQEKN----- 278
S V + +T + + S + E + + +
Sbjct: 199 SANAPAVVVTQNDTAVVLFRGGASAQNAVENQLARRGVQTVELVADLRTNPKTACTLEAE 258
Query: 279 QSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
++ + +K C + R+ +V +
Sbjct: 259 RTLPAAEMAVNTAQKLRCTPALVEMLRTRNGCLVRLTVGNRQFA 302
>gi|310767181|gb|ADP12131.1| Putative competence-like protein [Erwinia sp. Ejp617]
Length = 754
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 67/238 (28%), Gaps = 31/238 (13%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
++ + +Y + W ++ ++ L + F
Sbjct: 336 AVAGLLLWYHSFPLPARFCQRWRWLLLRLLHLQTGMLLLM------------MPLQALLF 383
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR-I 163
H I + L+AN+ A+P++S V +P L+A++ L + +D + + +
Sbjct: 384 HGISLSALVANLWAVPLISLVTVPLILLALMCNALPWISPLLW---QCVDRSLALVFMPL 440
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
+ P ++ + + M I L +
Sbjct: 441 QSLPRGW----FPLDHALSAASLLCWLALICLRFGWWRTSMASIASTALLICSWRSLFPA 496
Query: 224 ------LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
++ L ++ + + Y W P + + ++
Sbjct: 497 AEWRVDMLDVGHGLAVVISRQGEATLYDTGHR-----WPGGDAAQSQILPWLAWQGIR 549
>gi|226226861|ref|YP_002760967.1| hypothetical protein GAU_1455 [Gemmatimonas aurantiaca T-27]
gi|226090052|dbj|BAH38497.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 776
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 19/232 (8%), Positives = 57/232 (24%), Gaps = 19/232 (8%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN-------- 87
D + G++A+ + + + + +++
Sbjct: 312 DLGWQLSVGGMAALVAARGLRRRWRAHAQRHRHAGPGAAALMSWLGTRRGVTGWFVQEIF 371
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
G + + + F I + ++N+ I++ + L ++ I
Sbjct: 372 TGIVATLVTAPIIAWTFGRISLIAPLSNLPGGAIITLLQPALFLALLVAPIPGAGAFVAD 431
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+ ++ +A + + + + G
Sbjct: 432 ATQPLMALLDALAGAAANVPGAVLPVA--PSLLTVLGSGVAAACVVRGAAAARGMRWWIG 489
Query: 208 TIIILFTFPYSFS---------PDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ L ++ +L +G+ VAL P +
Sbjct: 490 AVAALVVAFWTSLLRGGSGEFEMHVLDVGQGDAVALRTPRGRWVLVDAGPRW 541
>gi|325131845|gb|EGC54545.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis M6190]
Length = 760
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 52/174 (29%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTAVRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + + L ++ +A EF + P
Sbjct: 422 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 471
>gi|78355594|ref|YP_387043.1| ComEC/Rec2-like protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78217999|gb|ABB37348.1| ComEC/Rec2-related protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 900
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 18/179 (10%), Positives = 50/179 (27%), Gaps = 9/179 (5%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD ++ I + + T + ++ + +
Sbjct: 420 ALFDLRLQLSAVAVAGIACTMPVYRAAAGRLGTKHGTAAG-AVMRLTGGLAGVLAVSMAA 478
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP----FGV 148
+ + F + + ++ N+L +P L V+P ++ + L F V
Sbjct: 479 QLALMPLTLDAFGSVTPWFVL-NVLWLPALGLWVLPLAFAGLVSLALPQAAPVAVWLFHV 537
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
++ ++ + + + F M+ + G+ +
Sbjct: 538 ATVPVEWLLEMLGTLEA--GGLLYPVLSVRPLPCAAAGF-WMLLGTACLLWRGTAGPAV 593
>gi|86605994|ref|YP_474757.1| DNA internalization competence protein [Synechococcus sp. JA-3-3Ab]
gi|86554536|gb|ABC99494.1| DNA internalization competence protein, ComEC/Rec2 family
[Synechococcus sp. JA-3-3Ab]
Length = 751
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 38/346 (10%), Positives = 101/346 (29%), Gaps = 25/346 (7%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + + ++ + + + +
Sbjct: 344 DLGFQLSFAATLGLLVGAGP-------------IGSRLDFLPPAVATAL--AVPLAAQIW 388
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLD 154
+ F IP Y L+AN L + +L +++ +A + ++ L ++ + + +
Sbjct: 389 TLPLQVAIFGRIPTYSLLANPLLLLLLVPLLVAGFGVAFVALLWPGLGSLLARPLTFLIT 448
Query: 155 IIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTN---IRHIGSIMIGITII 210
+I+ ++ + + GR+ + + + + F +R G+ +I I+
Sbjct: 449 PLINWVGWMASWPLSSYYTGRVSLLQCLLLYGALVALTFWPRWRRALRWQGTALIMAAIL 508
Query: 211 ILFTFPYSFSPDLLISEKGNL--VALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPH 268
+ ++ G L +A+ + + S P L
Sbjct: 509 LGPRLWPGPPVEITALASGRLPVLAIQAEGRHLLLNSGDPRLAERTVLPFLRQQGLRRLE 568
Query: 269 VQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLS 328
+ + EIL S + ++ + + +
Sbjct: 569 GAVAMTSAGSANGGWEILLSAFSIGQFWDGGGVNAASDSYLRSLSAVQAAGIPYQVLRPA 628
Query: 329 DILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKV 374
D + + R + L++T L+ +GS + +
Sbjct: 629 DRIPFSERLKLQAVHTNPLVLT---LEAEGSRWLLLGSAGPPVQAE 671
>gi|108804356|ref|YP_644293.1| ComEC/Rec2-like protein [Rubrobacter xylanophilus DSM 9941]
gi|108765599|gb|ABG04481.1| ComEC/Rec2-related protein [Rubrobacter xylanophilus DSM 9941]
Length = 531
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 50/164 (30%), Gaps = 13/164 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L++ F + I + ++S ++ ++
Sbjct: 349 LYNAGFQLSVAAVLGILLLRRPLE-----------DLLRLSPLRPPRAVSTLLSVSLAAQ 397
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + + F + + G+ N++A+P+ V++ L A+ +L P L
Sbjct: 398 LATAPIVAASFGEVSLVGVATNLVAVPLSGPVLVLGLLAALAGNVLPALAYPLNYANGAL 457
Query: 154 DIII-HIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKT 195
++ +A S + + + FL C
Sbjct: 458 VSVLEALAESASSLPGAAISVPDLTPALVALLYAGFLPAALCGG 501
>gi|257452143|ref|ZP_05617442.1| COME operon protein 3 [Fusobacterium sp. 3_1_5R]
gi|317058688|ref|ZP_07923173.1| COME operon protein 3 [Fusobacterium sp. 3_1_5R]
gi|313684364|gb|EFS21199.1| COME operon protein 3 [Fusobacterium sp. 3_1_5R]
Length = 384
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 42/150 (28%), Gaps = 22/150 (14%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
I + P+ P +F Y I I Y + + K+ + +
Sbjct: 223 AWILLMLHPTEVLSP-----SFLLSYTAILTIFYVFPLLKLYFEDVPP---------YLS 268
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
F IG F + N+L +PI + +++ L
Sbjct: 269 YIFYTLSIQCIGI-------PLTAYFFGSLACLSFFVNLLILPIGTSLIL-FSFFTFFLE 320
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
I L + ++ + I I I
Sbjct: 321 IFHLGFLTVPILEFFYHIFYEILEWIGELP 350
>gi|167626890|ref|YP_001677390.1| competence protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|167596891|gb|ABZ86889.1| competence protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 388
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 21/134 (15%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+ + + + + + + S + ++ L +I I
Sbjct: 2 YSVSLWLSFSAVMLLVI-------------ISIVLQQYKSKLVKTLLAQIYLAIFLV--- 45
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ +F V ++ANI+AIP++SFV++P L+ +LL + L + +
Sbjct: 46 ---PISVYYFGGFSVISILANIVAIPLVSFVIVPLLLVCLLLSYVGLSFWIIP--SLVIK 100
Query: 155 IIIHIAHRISVAHN 168
++I ++
Sbjct: 101 LLIAYLSFLTSYAG 114
>gi|110833913|ref|YP_692772.1| DNA internalization-like protein [Alcanivorax borkumensis SK2]
gi|110647024|emb|CAL16500.1| DNA internalization-related protein [Alcanivorax borkumensis SK2]
Length = 742
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 62/191 (32%), Gaps = 13/191 (6%)
Query: 53 YSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL 112
+P S ++ ++ R I + + + FH
Sbjct: 330 MIMPLAALSESLWLSFGAVAFIAMLTRSHGSWRLIILLPVVMTMASAGL--FHQWTPSAP 387
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+AN++ +P+ + +VIPA L+ LL A G+++ + + ++
Sbjct: 388 LANLILVPLYTVLVIPAALLGALLD----QTWLLQAAATGVELSVWVMTWLANQG----- 438
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
IP + V ++++F + + + P+ L S + +L
Sbjct: 439 --IPSWLMLPSTVSGIVLMFGLMLLLMPFVPFPRRLLPFCLLPWLTQQPEPLASGEWSLT 496
Query: 233 ALVDKNTLISN 243
A L
Sbjct: 497 AFDVGQGLAVA 507
>gi|332877536|ref|ZP_08445283.1| ComEC/Rec2-like protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332684642|gb|EGJ57492.1| ComEC/Rec2-like protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 705
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 12/161 (7%), Positives = 40/161 (24%), Gaps = 19/161 (11%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+D F + + I + + + + +
Sbjct: 363 YDVGFQLSFLAMFGILTICPRFQELP------------LMRWRYVRWIFQSLLVSFAAQL 410
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVV--IPAGLIAILLMILSLDNIPFGVMAWG 152
+ F Y A ++ P+ + ++ +P L++ + + + + G
Sbjct: 411 FTVPLVAYRFGTFSFYSAWATLVISPLTALLIYGMPLILLSGI-TGIGTTVCAWWIARLG 469
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ + S V ++++
Sbjct: 470 -TWQNDCLRAMMEWPYAVIH---TDWSLWFTVWCYVVLCVW 506
>gi|257466063|ref|ZP_05630374.1| COME operon protein 3 [Fusobacterium gonidiaformans ATCC 25563]
Length = 384
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 42/150 (28%), Gaps = 22/150 (14%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
I + P+ P +F Y I I Y + + K+ + +
Sbjct: 223 AWILLMLHPTEVLSP-----SFLLSYTAILTIFYVFPLLKLYFEDVPP---------YLS 268
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
F IG F + N+L +PI + +++ L
Sbjct: 269 YIFYTLSIQCIGI-------PLTAYFFGSLACLSFFVNLLILPIGTSLIL-FSFFTFFLE 320
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
I L + ++ + I I I
Sbjct: 321 IFHLGFLTVPILEFFYHIFYEILEWIGELP 350
>gi|300871604|ref|YP_003786477.1| hypothetical protein BP951000_1998 [Brachyspira pilosicoli 95/1000]
gi|300689305|gb|ADK31976.1| hypothetical protein BP951000_1998 [Brachyspira pilosicoli 95/1000]
Length = 515
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 5/159 (3%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + I +Y I S+ N + +I I S
Sbjct: 351 ISFQFSFLATLGIILYYPIYNFYIISKIKNLKINTFLKNI--FITILGFLAINIISLISI 408
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLD 154
I HF + + +IANI A+P+ SF+++ + LI I + L P + +
Sbjct: 409 LPLNIYHFKILNLNSIIANIFAVPL-SFIILSSSLITIFTYQIFNSLSIYPAKTTEFAAN 467
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
++I ++ IS + + I +L+
Sbjct: 468 LLIELSKGISDFQYLRYNFELNMYIAIFITFVIMLIGLL 506
>gi|328907124|gb|EGG26890.1| putative ComE operon protein 3 [Propionibacterium sp. P08]
Length = 675
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 21/186 (11%), Positives = 47/186 (25%), Gaps = 20/186 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W +++ + +
Sbjct: 351 VGFWLSVCATAGILWWAQ------PWSAAMAWAPTWLAT---------TITVPWAAQLAT 395
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ GLIAN+ A P + + +I L + +
Sbjct: 396 QPVITW---MAGTTGLIANLAAAPFVPLASALGMATGLFALIWPPLGAPFGRLAGCCVQP 452
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
II IAH + A + + + + + T + + + + T
Sbjct: 453 IIWIAHVGAKAPSGLLRWPAGGWAVGVL-AGICVGLALVTPAVLTRPWLTALAGLAVLTA 511
Query: 216 PYSFSP 221
P
Sbjct: 512 TVVRPP 517
>gi|268609924|ref|ZP_06143651.1| competence protein ComEC [Ruminococcus flavefaciens FD-1]
Length = 679
Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 24/235 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ++ + + I + P +FD F G I F
Sbjct: 296 IHRQNNSLNSLAIASLIILTAQPYA-----IFDAGFLLSVSGTFGIAVFAPFMTK----- 345
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
K +I Q ++ + S S + F + AN+L +P+ +
Sbjct: 346 ------NMKYETIPQIIAKDLMTAL--CTSVSVFPISMIFFDETSMISPAANVLLVPLCT 397
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++ + I +L + + + +I ++ R++ T+ + I
Sbjct: 398 ISMVNGLIFVITGGVLPILYPAKILTGF----VIAVSRRLADVRLFHLPHGSDFTAQLLI 453
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
+ F ++ I H + T + + + + + I VA+V K
Sbjct: 454 FLGFAVLGVY--FIAHSRKAVAVSTALAAAVYGITAASLMHIHRNELTVAVVGKG 506
>gi|257467981|ref|ZP_05632077.1| COME operon protein 3 [Fusobacterium ulcerans ATCC 49185]
Length = 451
Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 16/136 (11%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+ + +F Y + AI Y + + + + + T
Sbjct: 284 SMNEVSFILSYLAVFAIICIYPLIRKVIYKGKSK---------------FVEKLILLTTI 328
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ LIK F I +N++ +P+ + I + + L L L I F +
Sbjct: 329 QFFLTPILIKEFGTIQFLSFFSNLIILPV-GTLYILLAFVGLFLENLGLGFIVFPITNIV 387
Query: 153 LDIIIHIAHRISVAHN 168
+I + + S
Sbjct: 388 FEIFMKLVEIFSKIPG 403
>gi|152996171|ref|YP_001341006.1| ComEC/Rec2-like protein [Marinomonas sp. MWYL1]
gi|150837095|gb|ABR71071.1| ComEC/Rec2-related protein [Marinomonas sp. MWYL1]
Length = 644
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 79/257 (30%), Gaps = 36/257 (14%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K P+ T + L P PGL+ +FS Y I + +++
Sbjct: 310 MLALKVTPYGIITFALWLVLLFNPRAVLSPGLW-LSFSMVYLLIGYCQTSTKLSRLL--- 365
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ S ++ + ++ I +I N+L IP
Sbjct: 366 ------------------------MVQVMLSTASMVLILGWQEAISSASIIVNVLLIPFA 401
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+F+ P G+++ L + + + ++ L ++ + + +
Sbjct: 402 AFLWFPWGVLSFLEVSVIGSTYSYELLDRLLYYVMTPVDWSAFELPLLFFEQFTSSVPRL 461
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
I++ + ++ + ++ + I + +L + + L +K +
Sbjct: 462 IMLLLIGYWVYQSPLN--RGVVCALGIWCILFSS------MLFNGSTADITLKNKENSLI 513
Query: 243 NYSNPPSFIFSQWKSAL 259
+ W A
Sbjct: 514 ILEQNELLLADSWAGAD 530
>gi|323698363|ref|ZP_08110275.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio sp. ND132]
gi|323458295|gb|EGB14160.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio desulfuricans ND132]
Length = 819
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 66/190 (34%), Gaps = 15/190 (7%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D ++ IG Y + ++ + W + +
Sbjct: 343 SLYDLGLQMSLGAVAGIGLLYPYFRFLFFTGRRGAW--------RALSWAAGVLAVSVSA 394
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + + +F L+ N++ +P+L F V+P GL+ +LL + + G++
Sbjct: 395 TLAIMPLVAWYFGTFSP-NLLLNLVWLPVLGFAVMPLGLLGMLLSVSAWTAPAGGLLLGL 453
Query: 153 L----DIIIHIAHRI--SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIG 206
D ++ + + F + R + + + C + R + ++ G
Sbjct: 454 AARVADGLLWLLDAVRDGGLTPIFAVLRPLWPELLGFTLLLVTAAVCLRSKRRVPVLLAG 513
Query: 207 ITIIILFTFP 216
+ ++L
Sbjct: 514 LGFVLLVAPH 523
>gi|269214414|ref|ZP_05986508.2| DNA internalization-related competence protein ComEC/Rec2
[Neisseria lactamica ATCC 23970]
gi|269209819|gb|EEZ76274.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria lactamica ATCC 23970]
Length = 760
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 47/157 (29%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 422 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLAD 458
>gi|319410074|emb|CBY90408.1| Competence protein comA [Neisseria meningitidis WUE 2594]
Length = 760
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 51/174 (29%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L PS + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPSAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTALRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 422 VLTPLALLGSVVPFAPLQQAAAFLAEYTLRFLVWLA----GVSPEFAVAAAPLP 471
>gi|254454186|ref|ZP_05067623.1| competence protein, putative [Octadecabacter antarcticus 238]
gi|198268592|gb|EDY92862.1| competence protein, putative [Octadecabacter antarcticus 238]
Length = 172
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + + LSPPSGP PG FDF ++++G+ A+G Y+ ++ +E+
Sbjct: 29 DQGFITPEPGQVVLMTGHLSPPSGPVEPGGFDFQRMAWFEGLGAVG--YTRTPVLLGAEA 86
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + + ++ + A A+ +
Sbjct: 87 SEAAAGLWVYRQRVAISRGVQDRLNGESGAFAAAIMT 123
>gi|167032483|ref|YP_001667714.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida GB-1]
gi|166858971|gb|ABY97378.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida GB-1]
Length = 738
Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 88/270 (32%), Gaps = 26/270 (9%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG F + ++ + Y + S W+ + ++
Sbjct: 319 PLAALLPG-----FWLSFAAVATLIYCF----------SARLGAWRPWQAWTRAQWVVAI 363
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD-NI 144
+ + + + +AN++A+P +S V+P L+ LL+ L
Sbjct: 364 GLLPVLLATGLP---------VSLTAPLANLVAVPWISLAVLPLALLGTLLLPLGGVGEA 414
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSI 203
+ LD + + ++ + +P +++ + + LL++ + +R +G++
Sbjct: 415 LLWLAGGLLDWLFRLLALVAQQRPAWVPPALPLWAWLLVCLGALLVLLPRGVPLRALGAV 474
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPF 263
M+ + P + L L+ Y P+ S ++ P
Sbjct: 475 MLLALWVPREPVPLGQVEVWQLDVGQGLAVLLRTQHHNLLYDAGPARGESDLGERVVLPT 534
Query: 264 HEAPHVQKEDLQEKNQSSLKEILRSMQPRK 293
V DL + + + ++
Sbjct: 535 LHKLGVASLDLMVISHAHADHAGGAGAIQR 564
>gi|71065345|ref|YP_264072.1| competence protein, ComEC [Psychrobacter arcticus 273-4]
gi|71038330|gb|AAZ18638.1| possible competence protein, ComEC [Psychrobacter arcticus 273-4]
Length = 986
Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 59/160 (36%), Gaps = 5/160 (3%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + +A L P L+ + + ++ + + + + + +
Sbjct: 459 PVSTMRILFALAVLMAWHDPYV--LWQAGYWLSFIAVALLLKYEDTSQKQPLESNQPSTS 516
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
K+ + + + + + F ++GL+ N+ AI + ++++P
Sbjct: 517 HHKLLR-HLWLNFKRLFKLQCWLFLALLPVTLLLFGKASLWGLVVNLFAIGLFGWIIVPL 575
Query: 130 GLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH 167
L+A L ++ ++ NI + ++ + + + ++
Sbjct: 576 NLLAGLCYLILPAIANIIWTLVTAIVTNLHELISWLTAMP 615
>gi|15676600|ref|NP_273744.1| competence protein [Neisseria meningitidis MC58]
gi|7225931|gb|AAF41119.1| competence protein ComA [Neisseria meningitidis MC58]
gi|325200613|gb|ADY96068.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis H44/76]
Length = 691
Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 51/174 (29%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + S ++ +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 311 QTAVRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + + L ++ +A EF + P
Sbjct: 353 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 402
>gi|261377890|ref|ZP_05982463.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria cinerea ATCC 14685]
gi|269145744|gb|EEZ72162.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria cinerea ATCC 14685]
Length = 760
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 71/220 (32%), Gaps = 30/220 (13%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
G L P + ++A+ + S ++ + +
Sbjct: 339 ALGAVLLFDPLAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKRQTAVRGQW---- 387
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
S + + L F +P+ + N +AIP S+V+ P L+ ++
Sbjct: 388 --------------AASVCSVVLLGYLFASLPLISPLVNAVAIPWFSWVLTPLALLGSVV 433
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT- 195
L + + L ++ +A EF + P V + L ++ +
Sbjct: 434 PFAPLQQAAAFLAEYTLRFLVWLA----GVSPEFAVAAAPLPLLVLALCAALFVLLPRGL 489
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+R ++ + S ++++ + G ++++
Sbjct: 490 GLRPWSVAVLAGFVFYSPEAVRGNSAEVIVWDVGQGLSVL 529
>gi|225378289|ref|ZP_03755510.1| hypothetical protein ROSEINA2194_03950 [Roseburia inulinivorans DSM
16841]
gi|225209856|gb|EEG92210.1| hypothetical protein ROSEINA2194_03950 [Roseburia inulinivorans DSM
16841]
Length = 395
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 54/169 (31%), Gaps = 11/169 (6%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI-LSLDNIPFG 147
+ F+ +PV+ ++ N +PI+ ++ L + ++ + I F
Sbjct: 2 SFAIQLATVPLTAYFFYEVPVWSMLINFFVLPIIGVLLFLGLLGGFVGLLSVRAAGILFV 61
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPET---SFVTIVVEFLLMVFCKTNIRHIGSIM 204
W L + I P+ +++ +L K R G +
Sbjct: 62 PCHWILVFYEKVCRLSVSLPGAVWITGQPDWQKLLLFYLILGAVLFAMKKMKQRR-GFVF 120
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFS 253
IG +++ +L + + G + + + +F F
Sbjct: 121 IGCFMLLAVLHNPVKGFELDVLDVGQ------GDGMYLHTKEGTNFFFD 163
>gi|255065175|ref|ZP_05317030.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria sicca ATCC 29256]
gi|255050596|gb|EET46060.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria sicca ATCC 29256]
Length = 775
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 57/206 (27%), Gaps = 33/206 (16%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ L P + ++A+ + + W
Sbjct: 354 ALAVVVLIDPLAVLG-----VGTWLSFGLVAALIWASAGRLKERGWRLAVRGQW------ 402
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ + + L F +P+ + N IP S+V+ P L+ +L
Sbjct: 403 --------------AATVLSVVLLGYIFASLPIISPLVNAAMIPWFSWVLTPLALLGSVL 448
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
L G+ + L ++ +A EF + P V LL + +
Sbjct: 449 PFAPLQWAAAGLAEYTLRGLVWLAE----VSPEFAVAAAPVPLLVLAFAAALLWLLPRG- 503
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPD 222
+G ++ F F D
Sbjct: 504 ---LGLRPWACLVLAGFVFYRPDRLD 526
>gi|239631591|ref|ZP_04674622.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239526056|gb|EEQ65057.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 727
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 66/201 (32%), Gaps = 12/201 (5%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+ P+++ + T+ + + + + ++ + H +
Sbjct: 301 LFWQPRVLLTMGGQLTYLLTGLLVALPAMRSW---QLNWRLVLASMPVIAWHTFSFNILT 357
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
++ N L +PI V+P IA+LL GL ++ + +S +
Sbjct: 358 VLFNWLLMPIFELGVMPGLAIALLLP----HATLTATFDDGLQLLENGLVSLSRVPGQIV 413
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
G P ++ ++M+ R + + +T+ + ++ + +G+
Sbjct: 414 TGAFPSW---LALIGVVVMLTVIVAKRWLAAACWFVTVFGWCWYQPNYRVVMFDVGQGDA 470
Query: 232 VALVDK--NTLISNYSNPPSF 250
+ + + + F
Sbjct: 471 ILIETPFHQGALLIDTGGRIF 491
>gi|26988627|ref|NP_744052.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida KT2440]
gi|24983407|gb|AAN67516.1|AE016380_4 DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida KT2440]
Length = 737
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 88/272 (32%), Gaps = 26/272 (9%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P PG F + ++ + Y +S + WT +
Sbjct: 317 FEPLAALLPG-----FWLSFAAVATLIYCFSA--RLGGWRPWQAWTRAQWVIAVGLLPVL 369
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLD 142
+ + + + +AN++A+P +S V+P L+ L++ L +
Sbjct: 370 LATGLP-----------------VSLSAPLANLVAVPWVSLAVLPLALLGTLMLPLAGVG 412
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIG 201
+ LD++ ++ + +P +++ + + LL++ + +R +G
Sbjct: 413 EALLWLAGGLLDVLFRGLALVAQQRPAWVPPALPLWAWLLVCLGVLLVLLPRGVPLRGLG 472
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALIT 261
+M+ + P+ + L L+ Y P+ S ++
Sbjct: 473 GVMLLALWVPREPVPFGQVEVWQLDVGQGLAVLLRTRHHSLLYDAGPARGESDLGERVVL 532
Query: 262 PFHEAPHVQKEDLQEKNQSSLKEILRSMQPRK 293
P V D+ + + ++ +
Sbjct: 533 PTLRKLGVGGLDVMVISHAHADHAGGAVAIAR 564
>gi|153813608|ref|ZP_01966276.1| hypothetical protein RUMOBE_04031 [Ruminococcus obeum ATCC 29174]
gi|149830306|gb|EDM85399.1| hypothetical protein RUMOBE_04031 [Ruminococcus obeum ATCC 29174]
Length = 749
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 19/181 (10%), Positives = 52/181 (28%), Gaps = 18/181 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L++ F + ++ +G + E+ + K
Sbjct: 273 LYNSGFWLSFGAVAGLGVVAPVLAGCIRVENRLAASVMK------------TLVSSIAVQ 320
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI-LSLDNIPFGVMAWG 152
+ +++ + I + G N+L +P +S V++ + M +S
Sbjct: 321 MTTFPIMLRIYGEISLAGFFLNLLVLPTVSVVLVSGIAAVAVGMASVSAAVYVVLPGRVL 380
Query: 153 LDIIIHIAHRISVAHNEFCIGRIP-----ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
L + + + I P +V + + ++ + + G+
Sbjct: 381 LFLYEKLCELAAGIPFCTWIAGSPKLWQCAGYYVLLFLGVEILGMSRGTVTWNGATGKRA 440
Query: 208 T 208
Sbjct: 441 G 441
>gi|312796699|ref|YP_004029621.1| DNA translocation competence protein ComA [Burkholderia rhizoxinica
HKI 454]
gi|312168474|emb|CBW75477.1| DNA translocation competence protein ComA [Burkholderia rhizoxinica
HKI 454]
Length = 939
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 67/197 (34%), Gaps = 7/197 (3%)
Query: 56 PKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
P+ + + + + + +R + + + F IP G +AN
Sbjct: 515 PRSAKAFGALVARMRAAVRGMPTRLASAMRVQWAV--TLGLAPLTVVWFSQIPALGPVAN 572
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGR 174
+AIP +S +V+PA L+A + + D + + + I ++ + +
Sbjct: 573 AIAIPWVSTLVVPAVLLA-IAIPAPFDALLLQWAHRLVQWLFAILDALAEPAWGVWYLPA 631
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY---SFSPDLLISEKGNL 231
+ + +V M+ + + ++ + ++ + F L +G
Sbjct: 632 PEPAALLLALVGAAWMLGPRGWPLRAAAPILWLPLLWPASRAPLADGFRVTALDIGQGTA 691
Query: 232 VALVDKNTLISNYSNPP 248
V + + + P
Sbjct: 692 VLVETAQRRLLFDAGPG 708
>gi|284030320|ref|YP_003380251.1| DNA internalization-related competence protein ComEC/Rec2
[Kribbella flavida DSM 17836]
gi|283809613|gb|ADB31452.1| DNA internalization-related competence protein ComEC/Rec2
[Kribbella flavida DSM 17836]
Length = 794
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 60/235 (25%), Gaps = 19/235 (8%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
++ I L + A F+ + I W+ + +
Sbjct: 335 SVAVIVLLLLDTSLARSA----GFALSVLATAGIVLL--------------GPGWRDVLA 376
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA-GLIAI 134
+ + + + + + AN+LA P + I G I
Sbjct: 377 TWMPIRLAEAIACPLAAQLACTPIVAWLSGQVSLVAVAANLLAGPAVGPATILGFGAAGI 436
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
L+ L + + +W II +A + + + L + F
Sbjct: 437 ALLSSDLARLAGWLASWPARWIILVAETGADLPGAVSPWPATVVGVGLLTLLCLALTFGL 496
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ M+ +++F + LVA PS
Sbjct: 497 HRLLARPLAMLLAVAVLVFVVLRPTPRLGWPPDNWILVACDVGQGDGLVLRAGPS 551
>gi|86608392|ref|YP_477154.1| DNA internalization competence protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556934|gb|ABD01891.1| DNA internalization competence protein, ComEC/Rec2 family
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 758
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 30/282 (10%), Positives = 79/282 (28%), Gaps = 33/282 (11%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + + ++ + + + +
Sbjct: 344 DLGFQLSFAATLGLLV-------------GTAPIVSRLDFLPPAVATAL--AVPLAAQIW 388
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIP--AGLIAILLMILSLDNIPFGVMAWGL 153
+ F IP Y L+AN L + +L +++ LL L ++ + + +
Sbjct: 389 TLPLQVAIFGRIPTYSLLANPLLLILLVPLLVAGFGVAFGALLWP-GLGSLLARPLTFLI 447
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTN---IRHIGSIMIGITI 209
+I+ + ++ + + GR+ + + + + F R G+ +I I
Sbjct: 448 TPLINWVNWMASWPLSSYYTGRVSLLQCLLLYGALVALTFWPRWRQAFRWQGTALIMAAI 507
Query: 210 IILFTFPYSFS-----------PDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSA 258
++ P L I +G + L + ++ + P
Sbjct: 508 LLGPRMWPGPPVQITALASGRIPILAIQAEGRHLLLNSGDPRLAERTVLPFLRQQGLHRL 567
Query: 259 LITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + + K + + +F +
Sbjct: 568 DGAVAMTSAGSANGGWEILLSAFSKGVRPANAIGQFWDGGGA 609
>gi|227535190|ref|ZP_03965239.1| possible competence protein EC [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187235|gb|EEI67302.1| possible competence protein EC [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 734
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 66/201 (32%), Gaps = 12/201 (5%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+ P+++ + T+ + + + + ++ + H +
Sbjct: 308 LFWQPRVLLTMGGQLTYLLTGLLVALPAMRSW---QLNWRLVLASMPVIAWHTFSFNILT 364
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
++ N L +PI V+P IA+LL GL ++ + +S +
Sbjct: 365 VLFNWLLMPIFELGVMPGLAIALLLP----HATLTATFDDGLQLLENGLVSLSRVPGQIV 420
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
G P ++ ++M+ R + + +T+ + ++ + +G+
Sbjct: 421 TGAFPSW---LALIGVVVMLTVIVAKRWLAAACWFVTVFGWCWYQPNYRVVMFDVGQGDA 477
Query: 232 VALVDK--NTLISNYSNPPSF 250
+ + + + F
Sbjct: 478 ILIETPFHQGALLIDTGGRIF 498
>gi|306793891|ref|ZP_07432193.1| ComEC/Rec2-related protein [Mycobacterium tuberculosis SUMu005]
gi|308337771|gb|EFP26622.1| ComEC/Rec2-related protein [Mycobacterium tuberculosis SUMu005]
Length = 478
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 17/208 (8%), Positives = 54/208 (25%), Gaps = 20/208 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + + + P D F+ A+ +
Sbjct: 275 RRRQAIPALSGSVLVLLAAAPHLAV-----DIGFALSVAATGALVVIAPVWSRRLVDRGC 329
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++ + L G + + ++AN+ +++ +
Sbjct: 330 PKVLADALAVAAAAQLVTAPLVAAISG-------------RVSLVAVVANLAVAAVIAPI 376
Query: 126 VIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ + A+L++ + + ++ +AH S + +
Sbjct: 377 TVLGSVAAVLVVPWPAGAQVLIRFTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVG 436
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ + R + M + +
Sbjct: 437 -GATVFTVAQWRWRWFRAAMCKTMAVAV 463
>gi|227495914|ref|ZP_03926225.1| possible ComEC operon protein [Actinomyces urogenitalis DSM 15434]
gi|226834530|gb|EEH66913.1| possible ComEC operon protein [Actinomyces urogenitalis DSM 15434]
Length = 544
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 19/185 (10%), Positives = 52/185 (28%), Gaps = 20/185 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+++ ++ P+ + L P D+ F+ I
Sbjct: 357 VALGRRSATLPSLCGALVVLLLVDPWQ-----SRDYGFALSAAATGGIVL-----GTAPV 406
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
W + ++++ + A+ + L+ + ++ + AN+LA P
Sbjct: 407 QAGLGRWLPRWLATV---------LAVPLVAQAACAPLLVMLQPSVGLWAVPANVLAAPA 457
Query: 122 LSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ + A++ + L + G + +A +
Sbjct: 458 VPVATLCGLAAALVAPLWLGLAAVVAWPALVGCAWLALVARAFASLPGAVVAWPEGVWGA 517
Query: 181 VTIVV 185
V +
Sbjct: 518 VALAA 522
>gi|124006682|ref|ZP_01691514.1| competence protein, putative [Microscilla marina ATCC 23134]
gi|123987837|gb|EAY27528.1| competence protein, putative [Microscilla marina ATCC 23134]
Length = 711
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 20/158 (12%), Positives = 51/158 (32%), Gaps = 16/158 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F Y ++ I Y IY W + + ++ +
Sbjct: 363 VGFQLSYIAVAGIVYIQP---KIYQWLHFTHWLPDYLWQL---------TSVSIAAQIAT 410
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ +FH P Y L++N+L +P+ +++ +L + L+ I ++ ++ +
Sbjct: 411 FPLALYYFHQFPNYFLLSNLLVLPLAPVLLVLGIFTLLLSFVPWLNEILGYLLRLFIETL 470
Query: 157 IHIAHRISVAHNEFCIG----RIPETSFVTIVVEFLLM 190
+ ++ G ++ F +
Sbjct: 471 NMVIVALNKLPLAIAEGIYLRTADLWLIYVSMISFFWV 508
>gi|254514452|ref|ZP_05126513.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium NOR5-3]
gi|219676695|gb|EED33060.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium NOR5-3]
Length = 732
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 22/203 (10%), Positives = 64/203 (31%), Gaps = 26/203 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++ + ++ S + + + + A +
Sbjct: 295 SFWLTLGAVALLLWY-----------SAWSNARGWLRDAWGAQGFMLLAML--------- 334
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F G I N+LAIP+++ V+P L +++ L + + +
Sbjct: 335 PLSLYWFGEASSIGGIINLLAIPLVTLAVVPLLLGSLVCAPLFAGVADLQLQGAAALLSL 394
Query: 158 HIAHRISVAHNEFCI-----GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ ++ G + V LL ++ + +++ + +++
Sbjct: 395 LWS-TLAYWEPFIASRTILQGGPGVPTLALAVTGILLTPLPGLTVKTLIVVLLVVPLVLP 453
Query: 213 FTFPYSFSPDLLISEKGNLVALV 235
+L+ + G A++
Sbjct: 454 GPKGNPDIVELVFFDVGQGTAVL 476
Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 65/211 (30%), Gaps = 16/211 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I ARL P G P D + I A G S + + + +K+
Sbjct: 81 GAEITFDARLRRPWGLVNPAAADGEKAFLVANIHATG-SVSKLLIPGAEQHSGLRPSQKL 139
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ + +I++ + T + + + I A + A + +VI I
Sbjct: 140 DRMRDAISQQIQSKVPTDVGSLLAALAVGDRRAIAPESW-ARLRAYGLTHLLVISGMHIT 198
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-----------T 182
+L + ++ + ++ + F I +
Sbjct: 199 LLALP---GWWCGAALSRVIRLVFRQRFPVRALPPIFAIVTAGGYGLLSGFAIPSQRAVI 255
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
++ F+L C ++R + + ++
Sbjct: 256 MLTLFILPGVCGRSLRSARVLPLAGVTLLAL 286
>gi|227542971|ref|ZP_03973020.1| membrane metal-binding protein ComEC [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181193|gb|EEI62165.1| membrane metal-binding protein ComEC [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 527
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 20/204 (9%), Positives = 59/204 (28%), Gaps = 22/204 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I + ++ I A +
Sbjct: 291 YGFALSVAATAGIVVVSPLIAQALGFLPDLLARALAVAIAADVVTMPIIALMS------- 343
Query: 97 SIFLIKHFHCIPVYGLIANILA-IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ + ++AN+LA I + V+ +L+ + + + G
Sbjct: 344 --------GRVSLVSVVANLLAGIAVAPVTVLGLCGAVAMLLPGGGEGVFIRLAEPGAWW 395
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
I +A + + ++ +V +++ + + R + +++ + I
Sbjct: 396 IHAVATWANNLPHATVGISA---AWAVVVAGWIVYLILDGHPRLVATVVALVVIGGGHLP 452
Query: 216 PYSFSPDLLISEKGNLVALVDKNT 239
+ P +V + D +
Sbjct: 453 WRAGPPQATFDA---VVGVNDYDG 473
>gi|149197331|ref|ZP_01874382.1| competence protein [Lentisphaera araneosa HTCC2155]
gi|149139349|gb|EDM27751.1| competence protein [Lentisphaera araneosa HTCC2155]
Length = 680
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 16/195 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L ++K + + L P+ F F+F + + + + ++
Sbjct: 305 LCLSKSSISLNSLYAAGFVILLFDPNQVLL-AGFQFSFLVIFALLMS---LKPLDELCKI 360
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIG--TYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ W + S + N+I G S+ I + L+ N++ I
Sbjct: 361 LDEKINWG-QSFSYHRHHLKNKILKTFGITFVAYMSSLGMNIYLSANSNPFSLLVNLICI 419
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
F+ P A+L L + ++ D +A+ S +G +P
Sbjct: 420 ----FLAAPLMACALLSSALPFLSP---LLNSFTDFFAGLANMSSQF--SLKLGDLPGFV 470
Query: 180 FVTIVVEFLLMVFCK 194
+ FL+++ +
Sbjct: 471 CALYSLSFLMILRLR 485
>gi|301066375|ref|YP_003788398.1| putative hydrolase (metallo-beta-lactamase superfamily)
[Lactobacillus casei str. Zhang]
gi|300438782|gb|ADK18548.1| Predicted hydrolase (metallo-beta-lactamase superfamily)
[Lactobacillus casei str. Zhang]
Length = 734
Score = 45.6 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 66/201 (32%), Gaps = 12/201 (5%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+ P+++ + T+ + + + + ++ + H +
Sbjct: 308 LFWQPRVLLTMGGQLTYLLTGLLVALPAMRSW---QLNWRLVLASMPVIAWHTFSFNILT 364
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
++ N L +PI V+P IA+LL GL ++ + +S +
Sbjct: 365 VLFNWLLMPIFELGVMPGLAIALLLP----HATLTATFDDGLQLLENGLVSLSRVPGQIV 420
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
G P ++ ++M+ R + + +T+ + ++ + +G+
Sbjct: 421 TGAFPSW---LALIGVVVMLTVIVAKRWLAAACWFVTVFGWCWYQPNYRVVMFDVGQGDA 477
Query: 232 VALVDK--NTLISNYSNPPSF 250
+ + + + F
Sbjct: 478 ILIETPFHQGALLIDTGGRIF 498
>gi|15841932|ref|NP_336969.1| hypothetical protein MT2487 [Mycobacterium tuberculosis CDC1551]
gi|253798508|ref|YP_003031509.1| hypothetical protein TBMG_01560 [Mycobacterium tuberculosis KZN
1435]
gi|254232552|ref|ZP_04925879.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|308371005|ref|ZP_07423527.2| hypothetical protein TMCG_00513 [Mycobacterium tuberculosis
SUMu003]
gi|13882203|gb|AAK46783.1| hypothetical protein MT2487 [Mycobacterium tuberculosis CDC1551]
gi|124601611|gb|EAY60621.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|253320011|gb|ACT24614.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|308330119|gb|EFP18970.1| hypothetical protein TMCG_00513 [Mycobacterium tuberculosis
SUMu003]
Length = 517
Score = 45.6 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 17/208 (8%), Positives = 54/208 (25%), Gaps = 20/208 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + + + P D F+ A+ +
Sbjct: 314 RRRQAIPALSGSVLVLLAAAPHLAV-----DIGFALSVAATGALVVIAPVWSRRLVDRGC 368
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++ + L G + + ++AN+ +++ +
Sbjct: 369 PKVLADALAVAAAAQLVTAPLVAAISG-------------RVSLVAVVANLAVAAVIAPI 415
Query: 126 VIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ + A+L++ + + ++ +AH S + +
Sbjct: 416 TVLGSVAAVLVVPWPAGAQVLIRFTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVG 475
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ + R + M + +
Sbjct: 476 -GATVFTVAQWRWRWFRAAMCKTMAVAV 502
>gi|313837328|gb|EFS75042.1| metallo-beta-lactamase domain protein [Propionibacterium acnes
HL037PA2]
gi|314927998|gb|EFS91829.1| metallo-beta-lactamase domain protein [Propionibacterium acnes
HL044PA1]
gi|314971712|gb|EFT15810.1| metallo-beta-lactamase domain protein [Propionibacterium acnes
HL037PA3]
Length = 653
Score = 45.2 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 21/186 (11%), Positives = 47/186 (25%), Gaps = 20/186 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I ++ + W +++ + +
Sbjct: 329 VGFWLSVCATAGILWWAQ------PWSAAMAWAPTWLAT---------TITVPWAAQLAT 373
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ GLIAN+ A P + + +I L + +
Sbjct: 374 QPVITW---MAGTTGLIANLAAAPFVPLASALGMATGLFALIWPPLGAPFGRLAGCCVQP 430
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
II IAH + A + + + + + T + + + + T
Sbjct: 431 IIWIAHVGAKAPSGLLRWPAGGWAVGVL-AGICVGLALVTPAVLTRPWLTALAGLAVLTA 489
Query: 216 PYSFSP 221
P
Sbjct: 490 TVVRPP 495
>gi|15891941|ref|NP_359655.1| hypothetical protein RC0018 [Rickettsia conorii str. Malish 7]
gi|15619051|gb|AAL02556.1| unknown [Rickettsia conorii str. Malish 7]
Length = 82
Score = 45.2 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+A+L P P +DF F +Y I A GY S P++I +E++ I ++
Sbjct: 1 MLAKLYKPQNSILPEGYDFGFYAYLSDIGANGYAMSEPQIIERNETNFD---SFIYRVRS 57
Query: 79 SFLNEIRANIGTYGSA 94
N + I
Sbjct: 58 YIYNNLIEKIKGLLQL 73
>gi|187251873|ref|YP_001876355.1| putative membrane metal-binding protein [Elusimicrobium minutum
Pei191]
gi|186972033|gb|ACC99018.1| putative membrane metal-binding protein [Elusimicrobium minutum
Pei191]
Length = 609
Score = 45.2 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 38/135 (28%), Gaps = 18/135 (13%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ + L G D F + I + K+ + +
Sbjct: 268 GLCLAALIILITNPGSIK----DVGFQMSFLATFIILLSVNSFKLPAKWPKYIKIPLE-- 321
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
I T F+ + L++NI +P+ +++ AG +
Sbjct: 322 -----------IFLITTSVQLVLLPIYANVFYRFSITALLSNIFLVPLSG-IIMGAGFLL 369
Query: 134 ILLMILSLDNIPFGV 148
+L++ + V
Sbjct: 370 YFTYLLNISFLFKAV 384
>gi|255602339|ref|XP_002537832.1| conserved hypothetical protein [Ricinus communis]
gi|223514895|gb|EEF24551.1| conserved hypothetical protein [Ricinus communis]
Length = 280
Score = 45.2 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 18/197 (9%), Positives = 50/197 (25%), Gaps = 7/197 (3%)
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCK 194
++ +L G+ W + ++ S P L ++ +
Sbjct: 1 MLPATLAAPVLGLAHWLVQLLAQCLQWFSAMRYAVWSAPQPPFWLFCWAMFGTLWLLAPR 60
Query: 195 TN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK-NTLISNYSNPPSFIF 252
+R +G + P + + G +AL+ + + Y P++
Sbjct: 61 GWPVRWLGLATWIPLLAAEPAHPAPGRMTVTAFDVGQGMALLIETSGHRLLYDTGPAYSP 120
Query: 253 SQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIV 312
+ P+++ + + + ++ S
Sbjct: 121 D----SNAGSRVLLPYLRARGINALDGMVVSHSDADHAGGALSVLEGVRTGWVLSSLSPH 176
Query: 313 GVLKRKDMIRLSCQLSD 329
+ R + C
Sbjct: 177 HAIARAARQHVHCAAGQ 193
>gi|255262730|ref|ZP_05342072.1| competence protein [Thalassiobium sp. R2A62]
gi|255105065|gb|EET47739.1| competence protein [Thalassiobium sp. R2A62]
Length = 96
Score = 45.2 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 9/87 (10%)
Query: 306 HRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITII 365
VI K L C+ DI+I + C P+ L++ SL +T
Sbjct: 2 GEVRVIHLAGKAAQRSFLGCRSDDIVILSTAAERVFNCE---TYDPKRLRETKSLGVTRG 58
Query: 366 PPSNDNDKVKFIIKSAIENLHFPWTKH 392
D II + PW++H
Sbjct: 59 AVGWD------IITANAVAGQRPWSRH 79
>gi|261253311|ref|ZP_05945884.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio orientalis CIP 102891]
gi|260936702|gb|EEX92691.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio orientalis CIP 102891]
Length = 634
Score = 45.2 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 22/200 (11%), Positives = 60/200 (30%), Gaps = 29/200 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+ + + F S+ K S ++W +
Sbjct: 219 SLWLSMAAVGFVFIFLSVTKR-----SQSSW--------------VKAIKLQAVIVLLML 259
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM-AWGLDII 156
FH I + + N++ +P +F+V+P + L ++ M L +
Sbjct: 260 PITALLFHGISLSAFVYNLIFVPWFTFIVVPMLFFTFSVSYLGINTASLWSMADLSLAPV 319
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFT 214
I + + + L+ + + ++ ++ I + +
Sbjct: 320 IWAIDY-AQWGWVDLSYSEVKW------LGMLVALLLAYRVLNKYGVIAVLAICVSLDTR 372
Query: 215 FPYSFSPDLLISEKGNLVAL 234
+ +L + + G+ +A+
Sbjct: 373 WQQQPLWELSVFDVGHGLAI 392
>gi|258651750|ref|YP_003200906.1| DNA internalization-related competence protein ComEC/Rec2
[Nakamurella multipartita DSM 44233]
gi|258554975|gb|ACV77917.1| DNA internalization-related competence protein ComEC/Rec2
[Nakamurella multipartita DSM 44233]
Length = 790
Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 22/192 (11%), Positives = 51/192 (26%), Gaps = 15/192 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F+ + + + + I
Sbjct: 352 GFALSVLATAGLVLLAPLWSGVLQRRGVPAGWAD-------------LLAIPVAAQVVTM 398
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DII 156
++ I V G+ AN+L P++ ++ L A+ F +A L + I
Sbjct: 399 PVIVLISGAISVVGVPANLLVAPVVGPALMLGMLAALTGPWWPDGAAFFAQLAAPLLNWI 458
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTF 215
+AH ++ +V + V + + I + + +++
Sbjct: 459 GWVAHTLARWPTATVPWPATPVGAAVLVGVTVGAVLVLRRRWGRLLVIAVVVGVVVAVVP 518
Query: 216 PYSFSPDLLISE 227
+ P I
Sbjct: 519 TKVWVPGWPIDG 530
>gi|15609551|ref|NP_216930.1| hypothetical protein Rv2414c [Mycobacterium tuberculosis H37Rv]
gi|121638295|ref|YP_978519.1| hypothetical protein BCG_2430c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148662248|ref|YP_001283771.1| hypothetical protein MRA_2439 [Mycobacterium tuberculosis H37Ra]
gi|148823617|ref|YP_001288371.1| hypothetical protein TBFG_12442 [Mycobacterium tuberculosis F11]
gi|215404348|ref|ZP_03416529.1| hypothetical protein Mtub0_11830 [Mycobacterium tuberculosis
02_1987]
gi|215412166|ref|ZP_03420930.1| hypothetical protein Mtub9_12567 [Mycobacterium tuberculosis
94_M4241A]
gi|215427796|ref|ZP_03425715.1| hypothetical protein MtubT9_15982 [Mycobacterium tuberculosis T92]
gi|215431357|ref|ZP_03429276.1| hypothetical protein MtubE_11883 [Mycobacterium tuberculosis
EAS054]
gi|218754143|ref|ZP_03532939.1| hypothetical protein MtubG1_12244 [Mycobacterium tuberculosis GM
1503]
gi|219558409|ref|ZP_03537485.1| hypothetical protein MtubT1_14337 [Mycobacterium tuberculosis T17]
gi|224990789|ref|YP_002645476.1| hypothetical protein JTY_2424 [Mycobacterium bovis BCG str. Tokyo
172]
gi|254365189|ref|ZP_04981235.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|254551461|ref|ZP_05141908.1| hypothetical protein Mtube_13544 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260187420|ref|ZP_05764894.1| hypothetical protein MtubCP_15506 [Mycobacterium tuberculosis
CPHL_A]
gi|260205717|ref|ZP_05773208.1| hypothetical protein MtubK8_15599 [Mycobacterium tuberculosis K85]
gi|289448056|ref|ZP_06437800.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289553796|ref|ZP_06443006.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289570562|ref|ZP_06450789.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289575107|ref|ZP_06455334.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289746195|ref|ZP_06505573.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289751019|ref|ZP_06510397.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289754521|ref|ZP_06513899.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289762581|ref|ZP_06521959.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294994478|ref|ZP_06800169.1| ComEC/Rec2-related protein [Mycobacterium tuberculosis 210]
gi|297635018|ref|ZP_06952798.1| ComEC/Rec2-related protein [Mycobacterium tuberculosis KZN 4207]
gi|297732010|ref|ZP_06961128.1| ComEC/Rec2-related protein [Mycobacterium tuberculosis KZN R506]
gi|298525896|ref|ZP_07013305.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306776681|ref|ZP_07415018.1| hypothetical protein TMAG_02973 [Mycobacterium tuberculosis
SUMu001]
gi|306780455|ref|ZP_07418792.1| hypothetical protein TMBG_00957 [Mycobacterium tuberculosis
SUMu002]
gi|306789566|ref|ZP_07427888.1| hypothetical protein TMDG_00892 [Mycobacterium tuberculosis
SUMu004]
gi|306798288|ref|ZP_07436590.1| hypothetical protein TMFG_01378 [Mycobacterium tuberculosis
SUMu006]
gi|306804163|ref|ZP_07440831.1| hypothetical protein TMHG_01608 [Mycobacterium tuberculosis
SUMu008]
gi|306808734|ref|ZP_07445402.1| hypothetical protein TMGG_00976 [Mycobacterium tuberculosis
SUMu007]
gi|306972793|ref|ZP_07485454.1| hypothetical protein TMJG_00682 [Mycobacterium tuberculosis
SUMu010]
gi|307080498|ref|ZP_07489668.1| hypothetical protein TMKG_00676 [Mycobacterium tuberculosis
SUMu011]
gi|307085096|ref|ZP_07494209.1| hypothetical protein TMLG_02166 [Mycobacterium tuberculosis
SUMu012]
gi|313659345|ref|ZP_07816225.1| hypothetical protein MtubKV_13034 [Mycobacterium tuberculosis KZN
V2475]
gi|1655645|emb|CAB03744.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|121493943|emb|CAL72418.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134150703|gb|EBA42748.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|148506400|gb|ABQ74209.1| hypothetical protein MRA_2439 [Mycobacterium tuberculosis H37Ra]
gi|148722144|gb|ABR06769.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224773902|dbj|BAH26708.1| hypothetical protein JTY_2424 [Mycobacterium bovis BCG str. Tokyo
172]
gi|289421014|gb|EFD18215.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289438428|gb|EFD20921.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289539538|gb|EFD44116.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289544316|gb|EFD47964.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289686723|gb|EFD54211.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289691606|gb|EFD59035.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289695108|gb|EFD62537.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289710087|gb|EFD74103.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|298495690|gb|EFI30984.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308214930|gb|EFO74329.1| hypothetical protein TMAG_02973 [Mycobacterium tuberculosis
SUMu001]
gi|308326691|gb|EFP15542.1| hypothetical protein TMBG_00957 [Mycobacterium tuberculosis
SUMu002]
gi|308333959|gb|EFP22810.1| hypothetical protein TMDG_00892 [Mycobacterium tuberculosis
SUMu004]
gi|308341433|gb|EFP30284.1| hypothetical protein TMFG_01378 [Mycobacterium tuberculosis
SUMu006]
gi|308344929|gb|EFP33780.1| hypothetical protein TMGG_00976 [Mycobacterium tuberculosis
SUMu007]
gi|308349240|gb|EFP38091.1| hypothetical protein TMHG_01608 [Mycobacterium tuberculosis
SUMu008]
gi|308357805|gb|EFP46656.1| hypothetical protein TMJG_00682 [Mycobacterium tuberculosis
SUMu010]
gi|308361750|gb|EFP50601.1| hypothetical protein TMKG_00676 [Mycobacterium tuberculosis
SUMu011]
gi|308365360|gb|EFP54211.1| hypothetical protein TMLG_02166 [Mycobacterium tuberculosis
SUMu012]
gi|323719011|gb|EGB28160.1| hypothetical protein TMMG_01706 [Mycobacterium tuberculosis
CDC1551A]
gi|326904031|gb|EGE50964.1| hypothetical protein TBPG_01920 [Mycobacterium tuberculosis W-148]
gi|328458276|gb|AEB03699.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 514
Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 17/208 (8%), Positives = 54/208 (25%), Gaps = 20/208 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + + + P D F+ A+ +
Sbjct: 311 RRRQAIPALSGSVLVLLAAAPHLAV-----DIGFALSVAATGALVVIAPVWSRRLVDRGC 365
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++ + L G + + ++AN+ +++ +
Sbjct: 366 PKVLADALAVAAAAQLVTAPLVAAISG-------------RVSLVAVVANLAVAAVIAPI 412
Query: 126 VIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ + A+L++ + + ++ +AH S + +
Sbjct: 413 TVLGSVAAVLVVPWPAGAQVLIRFTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVG 472
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ + R + M + +
Sbjct: 473 -GATVFTVAQWRWRWFRAAMCKTMAVAV 499
>gi|309388913|gb|ADO76793.1| DNA internalization-related competence protein ComEC/Rec2
[Halanaerobium praevalens DSM 2228]
Length = 776
Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 29/127 (22%)
Query: 16 TIEGIARLSPPSGPAFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+ I L P LF + Y + A+ Y I K
Sbjct: 329 ALTLIINL-----VINPLALFTVSLQLSYILVLALFYLTPIFKQRLP------------- 370
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ + ++ +F+ LI N+ IP +S + +P +
Sbjct: 371 ---------VFLAVSLVAQLASIAIAGYYFNQYSYISLITNLWLIPYISLL-LPFIFTLV 420
Query: 135 LLMILSL 141
L I SL
Sbjct: 421 FLSIFSL 427
>gi|257889674|ref|ZP_05669327.1| competence protein ComEC [Enterococcus faecium 1,231,410]
gi|257826034|gb|EEV52660.1| competence protein ComEC [Enterococcus faecium 1,231,410]
Length = 737
Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 294 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 352
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HFH P+ G + +L P+ F+ +P L L
Sbjct: 353 WHFHEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 388
>gi|296103085|ref|YP_003613231.1| hypothetical protein ECL_02741 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057544|gb|ADF62282.1| hypothetical protein ECL_02741 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 723
Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 65/215 (30%), Gaps = 27/215 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ + + + P L + ++A+ ++Y +
Sbjct: 268 RQWSAWQVWCSCIAAILIVDPLAVLSQSL-----ALSAFAVAALIFWYQWLPLPS----- 317
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ N+ + FH V L+AN+ A+P+++F+
Sbjct: 318 ----WRWTRRVRPLVN---LLNLQVGMLLLLLPLQVLMFHGFSVSSLVANLFAVPLVTFI 370
Query: 126 VIP---AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P G++ LL ++SL+ + L + + R + +
Sbjct: 371 SVPLILLGMLLHLLPLVSLETGVWFAANKSLAGLFWLLQR---LPDGWQDVDERWQYLAL 427
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ + R S+ +
Sbjct: 428 LP----WLAIIGWRFRSWKSMPAVCLTGTVVLASP 458
>gi|239917746|ref|YP_002957304.1| Putative ComEC/Rec2-related protein [Micrococcus luteus NCTC 2665]
gi|239838953|gb|ACS30750.1| Putative ComEC/Rec2-related protein [Micrococcus luteus NCTC 2665]
Length = 867
Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 18/169 (10%), Positives = 45/169 (26%), Gaps = 12/169 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + I + ++ + + +
Sbjct: 383 AFHLSLAATAGIVL------GGAPLDRALHAGLGRVMPDVVARWLSASLAVTVAAHLACQ 436
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDII 156
++ + Y + AN+LA P + V + L A L + + V+ W I
Sbjct: 437 PIILAMTGEVSAYAVPANLLAAPAVPPVTVLGTLAAALALPAPGIAAALVAVIQWPAAWI 496
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+AH + + +++ T + +++
Sbjct: 497 GWVAHTSASLPGALR-----PWPAGALGAGLGVLLVAATLLGFAAVLLL 540
>gi|306818032|ref|ZP_07451764.1| membrane protein [Mobiluncus mulieris ATCC 35239]
gi|304649193|gb|EFM46486.1| membrane protein [Mobiluncus mulieris ATCC 35239]
Length = 737
Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 25/231 (10%), Positives = 60/231 (25%), Gaps = 47/231 (20%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ + A + L P A + F+ +I + +
Sbjct: 515 LALARPAKSIAALSLAVMAMLLVNPWQAAS-----WGFALSVVATFSIV------TLGQA 563
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ ++ I ++ + ++ L AN+L +
Sbjct: 564 LSRWLATFLPRFLALP--------LAISLSAQLGCQPLMLIFRGKLQLFSLPANLLTGAV 615
Query: 122 LSFVVIPAGLI------------------------AILLMILS-LDNIPFGVMAWGLDII 156
S V + ++ A++ S L + V + I
Sbjct: 616 SSIVTVGGLVLVALATITHLGITLAQFATFLEPASALIFAPFSPLTEVTAQVTGLAANWI 675
Query: 157 IHIAHRISVAHNE---FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ +A S + + + + FL + +RH +
Sbjct: 676 LGVARFFSQLQGAEIPWIESGYGIFGILVVTLAFLWLSGRYAYLRHWSVSL 726
>gi|241889683|ref|ZP_04776981.1| ComEC/Rec2-related protein [Gemella haemolysans ATCC 10379]
gi|241863305|gb|EER67689.1| ComEC/Rec2-related protein [Gemella haemolysans ATCC 10379]
Length = 641
Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 49/137 (35%), Gaps = 24/137 (17%)
Query: 6 KKYDPFPAETTI-EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ + + + + + F F +F + +
Sbjct: 293 RRKNIDKLGSLLFTFLILIMYNPLLIFNIGFQLSFLITFSLL------------------ 334
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ I K F + +R I + ++ L+ +F+ I + +NI+ +PI S
Sbjct: 335 ---MSESYIKKSKNKFHSALR--ISVISTLASIPILMYNFYNIVYISVFSNIILVPIFSV 389
Query: 125 VVIPAGLIAILLMILSL 141
V+ P + + L+ +++
Sbjct: 390 VIFPLVIFSYLVFLINA 406
>gi|241667471|ref|ZP_04755049.1| ComEC/Rec2-related competence protein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254876018|ref|ZP_05248728.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842039|gb|EET20453.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 671
Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 50/136 (36%), Gaps = 21/136 (15%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
++ + + + + + + S + ++ L +I I
Sbjct: 283 SMYSVSLWLSFSAVMLLVI-------------ISIVLQQYKSKLVKTLLAQIYLAIFLV- 328
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ +F V ++AN +AIP++SFV++P L+ +LL + L +
Sbjct: 329 -----PISVYYFGGFSVISILANTVAIPLVSFVIVPLLLVCLLLSYVGLSFWIIP--SLV 381
Query: 153 LDIIIHIAHRISVAHN 168
+ ++I ++
Sbjct: 382 IKLLIAYLSFLTSYAG 397
>gi|46143198|ref|ZP_00135692.2| COG2333: Predicted hydrolase (metallo-beta-lactamase superfamily)
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 193
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGL 153
+ FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L
Sbjct: 1 MPVQMVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSL 60
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIIL 212
++ + + + L+V + N R + ++ + +++
Sbjct: 61 ALLFW---GLKSLPEGWINIAECWQWLSFSP--WFLLVVWRLNAWRTLPAMCVAGGLLMC 115
Query: 213 FTFPYSFSPD 222
+ PD
Sbjct: 116 WPLWQKPRPD 125
>gi|316983678|gb|EFV62659.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria meningitidis H44/76]
Length = 760
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 51/174 (29%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACSG--RLHEGKR 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTAVRGQW------------------AASVLSLVLLGYLFASLPLISPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + + L ++ +A EF + P
Sbjct: 422 VLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 471
>gi|194334304|ref|YP_002016164.1| ComEC/Rec2-like protein [Prosthecochloris aestuarii DSM 271]
gi|194312122|gb|ACF46517.1| ComEC/Rec2-related protein [Prosthecochloris aestuarii DSM 271]
Length = 728
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 76/245 (31%), Gaps = 17/245 (6%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ P + + + P L+ F ++AI Y P + + S
Sbjct: 341 RQVYPLNSLAFADLLMLAFDPLE-----LYQAGFLMTNAAVAAILLLY--PLLSAPALSW 393
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ +I F I A S + +F V G++AN+ + +++ +
Sbjct: 394 QGSVGRACRAIWNPF------CISLSAMAGVSPLIALYFGSFSVAGIVANLPVVFLVTAM 447
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDII-IHIAHRISVAHNEFCIGRIPETSFVTIV 184
V L ++ + AW + + S R V
Sbjct: 448 VFSLLPALFLHLLNLPLAELYASSAWFFAHTALSVTGFFSSLEWAALPVRTDPLMVVIYY 507
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+ + +++ ++ G I+ +++ + + L+ + + Y
Sbjct: 508 LSIVALLYFFYEKKNAGLIITLLSLANFICWYPLLHA---MQASERLIPVRTGRYIALLY 564
Query: 245 SNPPS 249
++ S
Sbjct: 565 ASQAS 569
>gi|240120659|ref|ZP_04733621.1| ComA [Neisseria gonorrhoeae PID24-1]
Length = 444
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 11 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--CLYEGKR 63
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 64 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 105
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 106 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 155
>gi|227499823|ref|ZP_03929918.1| competence protein EC [Anaerococcus tetradius ATCC 35098]
gi|227218127|gb|EEI83395.1| competence protein EC [Anaerococcus tetradius ATCC 35098]
Length = 723
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 26/224 (11%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LF+ F + + Y + S + ++
Sbjct: 310 ALFNAGFILSFAASFGVYLIYPKFRSKRKSYTRDSL------------------AFTVSI 351
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVV-IPAGLIAILLMILSLDNIPFGVMAW 151
S F+I ++ I + ++AN L +PI + + I L+ ++ + + FG++ +
Sbjct: 352 QLGLSPFIIFYYGRINLLSILANFLILPIFTLAMYIIFALVFFYPLLGKILGMFFGILDF 411
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI------GSIMI 205
++ +++I ++ P L++ TN R + +
Sbjct: 412 LVNSLLNITILLNKISLFKFDFAKPSMILAIYAF-LLIIFLLNTNKRDLKKKANIFLLSA 470
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ + L S ++ +G+ + D P
Sbjct: 471 SLILASLINESRELSYQMIDIGQGDAFMIKDGTNYYLIDVGGPK 514
>gi|172036762|ref|YP_001803263.1| competence protein [Cyanothece sp. ATCC 51142]
gi|171698216|gb|ACB51197.1| competence protein [Cyanothece sp. ATCC 51142]
Length = 748
Score = 45.2 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 64/175 (36%), Gaps = 24/175 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++D F + A+ + K+ + + I + S
Sbjct: 355 IWDLGFQLSFLATFALLV-------------TSPSIENKLDFLPPKIASMI--AVPVAVS 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA---GLIAILLMILSLDNIPFGVMA 150
S ++ FH Y + NILA P++ +VI + I++ ++ ++
Sbjct: 400 IWTSPLIMYVFHTFSFYTIPCNILATPLIILLVIGGIISAIFMIIVPSFGIE--LAKLLF 457
Query: 151 WGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVF---CKTNIRHIG 201
L+I++ A +I + F +G+I T+ + I L + + + +G
Sbjct: 458 LPLEILLQSAEQIPKLKLSAFAVGQISLTTLIVIYGILLTIWLNKKWQKRWKTVG 512
>gi|330945619|gb|EGH47113.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 294
Score = 44.8 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L + ++
Sbjct: 11 ISLSGPFANLLAVPWVSVIVLPPALLGTLLLPVPVVGEGLLWLAGGALQWLFVFLDAVAA 70
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
A + +P ++ ++ LL++ K +R +G ++ + + ++L
Sbjct: 71 ALPAWLPSAVPIWAWWLSLLGALLLLLPKGVPMRPLGWPLLLLCVFPPLESVPEGQVEVL 130
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 131 QLDVGQGLAIL 141
>gi|329895072|ref|ZP_08270817.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium IMCC3088]
gi|328922517|gb|EGG29855.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium IMCC3088]
Length = 780
Score = 44.8 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 43/160 (26%), Gaps = 32/160 (20%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ + P + L P P F + + +
Sbjct: 330 LGRDGQPLRLFWWALTLCLLINPLTGLLP-----AFWLSFGAVFMVLI------------ 372
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
++ + + L + + + + F + + AN+LA+P+
Sbjct: 373 --SSAIVGRFEGPRAYVLTHVAICV------AMWPASLVFFGQASLVSIPANMLAVPVAG 424
Query: 124 FVVIPAGLIAILLMILS-------LDNIPFGVMAWGLDII 156
++P L+ L L L + + ++
Sbjct: 425 LWLVPLSLLGALAGSLGAMTVSALLWSWAAWPLGLAESLL 464
>gi|209522797|ref|ZP_03271355.1| ComEC/Rec2-related protein [Arthrospira maxima CS-328]
gi|209496846|gb|EDZ97143.1| ComEC/Rec2-related protein [Arthrospira maxima CS-328]
Length = 815
Score = 44.8 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 47/134 (35%), Gaps = 16/134 (11%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + ++ +G ++P ++ S + + + I + +
Sbjct: 387 DLGFQFSF--LATLGLLVTVPPLMRS-----------LQWLPPVIASCI--AVPIAATVW 431
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA-WGLD 154
I F+ + + + NIL +P ++ + + L A + +I + L+
Sbjct: 432 ILPLQIYVFNLVSPFSIFVNILVVPFITVITLGGMLTASVAIISPWAAAALATALYYPLE 491
Query: 155 IIIHIAHRISVAHN 168
+I+I +
Sbjct: 492 GLIYIVEFFNDLPG 505
>gi|323692783|ref|ZP_08107010.1| hypothetical protein HMPREF9475_01873 [Clostridium symbiosum
WAL-14673]
gi|323503097|gb|EGB18932.1| hypothetical protein HMPREF9475_01873 [Clostridium symbiosum
WAL-14673]
Length = 765
Score = 44.8 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 22/116 (18%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + + L P LF Y + A+G K+ S
Sbjct: 255 YDLLSAMALSLILLASDSPYL--LFTSGLQLSYGAVGAVGLA-GNMKIHGSPLFTT---- 307
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ ++ HF P+YGL N++ IP++++
Sbjct: 308 ---------------MSASIAIQIVTLPVILYHFFEFPLYGLFLNLVVIPLMAYAA 348
>gi|260201539|ref|ZP_05769030.1| hypothetical protein MtubT4_15837 [Mycobacterium tuberculosis T46]
gi|289443937|ref|ZP_06433681.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289416856|gb|EFD14096.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length = 514
Score = 44.8 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 17/208 (8%), Positives = 54/208 (25%), Gaps = 20/208 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + + + P D F+ A+ +
Sbjct: 311 RRRQAIPALSGSVLVLLAAAPHLAV-----DIGFALSVAATGALVVIAPVWSRRLVDRGC 365
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++ + L G + + ++AN+ +++ +
Sbjct: 366 PKVLADALAVAAAAQLVTAPLVAAISG-------------RVSLVAVVANLAVAAVIAPI 412
Query: 126 VIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ + A+L++ + + ++ +AH S + +
Sbjct: 413 TVLGSVAAVLVVPWPAGAQVLIRFTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVG 472
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ + R + M + +
Sbjct: 473 -GATVFTVAQWRWRWFRAAMCKTMAVAV 499
>gi|257868067|ref|ZP_05647720.1| competence protein ComEC [Enterococcus casseliflavus EC30]
gi|257874397|ref|ZP_05654050.1| competence protein ComEC [Enterococcus casseliflavus EC10]
gi|257802150|gb|EEV31053.1| competence protein ComEC [Enterococcus casseliflavus EC30]
gi|257808561|gb|EEV37383.1| competence protein ComEC [Enterococcus casseliflavus EC10]
Length = 747
Score = 44.8 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 70/233 (30%), Gaps = 25/233 (10%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
GI + PK++ + + + +++ +A + + F
Sbjct: 311 GIVLTALLFVDPKVLLQTSGQLSLLMTFLIVMQRPIKLTWFWRSQFLTVLAAPVIVSL-F 369
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLM--------ILSLDNIPFGVMAWGLDII 156
+ P++G + +P V++PA + + ++L +M + +
Sbjct: 370 YEFPLFGGFLTFVFLPFFQLVLLPACFLMFIAGTLFPTISGPIALFEGLLSLMEVVVGAV 429
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF--- 213
++ + LL + C R + I + + I+F
Sbjct: 430 GDVSITVGALPA------------GLAASCCLLGLLCYQKKRWLLVICFSLVVPIVFQQN 477
Query: 214 -TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
P D+ + L A ++ + + SF W+ E
Sbjct: 478 RVLPTISYVDVGQGDSIVLQAEKNREVYVIDTGGSLSFPNENWQERKRQAAAE 530
>gi|212709794|ref|ZP_03317922.1| hypothetical protein PROVALCAL_00842 [Providencia alcalifaciens DSM
30120]
gi|212687605|gb|EEB47133.1| hypothetical protein PROVALCAL_00842 [Providencia alcalifaciens DSM
30120]
Length = 768
Score = 44.8 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 31/223 (13%), Positives = 75/223 (33%), Gaps = 30/223 (13%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + AI Y++ I + H + ++
Sbjct: 345 SFWLSSFAVLAILYWFRIFPIPLVFNRHPLFR-----------RVVPLIHLQIGLLILLI 393
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-----IPFGVMAWG 152
+ F I V L AN+ +P++++ V+P + ILL ++ + V+ G
Sbjct: 394 PIQVLLFKGINVMSLFANLWFVPLITWGVVP-IVFGILLFPINAWHNIAFRFIDKVIEIG 452
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR-HIGSIMIGITIII 211
L+ ++++ N F + + ++ + + R ++G ++ I ++
Sbjct: 453 LEPLVYL--------NSFWVEINAISIYIVLFCGSFAFILLFGWYRNYLGLLICFIVMLF 504
Query: 212 LFTFPYSFSPD----LLISEKGNLVALVDKNTLISNYSNPPSF 250
+L+ L A++ +N Y +
Sbjct: 505 FTQSKNQHQEHDWCLILLDIGHGLAAIMVQNQQGVLYDTGNRW 547
>gi|307700532|ref|ZP_07637567.1| ComEC/Rec2-like protein [Mobiluncus mulieris FB024-16]
gi|307614283|gb|EFN93517.1| ComEC/Rec2-like protein [Mobiluncus mulieris FB024-16]
Length = 730
Score = 44.8 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 25/231 (10%), Positives = 60/231 (25%), Gaps = 47/231 (20%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ + A + L P A + F+ +I + +
Sbjct: 508 LALARPAKSIAALSLAVMAMLLVNPWQAAS-----WGFALSVVATFSIV------TLGQA 556
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ ++ I ++ + ++ L AN+L +
Sbjct: 557 LSRWLATFLPRFLALP--------LAISLSAQLGCQPLMLIFRGKLQLFSLPANLLTGAV 608
Query: 122 LSFVVIPAGLI------------------------AILLMILS-LDNIPFGVMAWGLDII 156
S V + ++ A++ S L + V + I
Sbjct: 609 SSIVTVGGLVLVALATITHLGITLAQFATFLEPASALIFAPFSPLTEVTAQVTGLAANWI 668
Query: 157 IHIAHRISVAHNE---FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ +A S + + + + FL + +RH +
Sbjct: 669 LGVARFFSQLQGAEIPWIESGYGIFGILVVTLAFLWLSGRYAYLRHWSVSL 719
>gi|183598364|ref|ZP_02959857.1| hypothetical protein PROSTU_01756 [Providencia stuartii ATCC 25827]
gi|188020540|gb|EDU58580.1| hypothetical protein PROSTU_01756 [Providencia stuartii ATCC 25827]
Length = 777
Score = 44.8 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 17/141 (12%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
G+ L+ P +F + AI Y++ + + SS + +T +
Sbjct: 332 GLIVLADPLAMLS-----DSFWLSSFAVLAILYWFKLFSV--SSSTQHTKVLGWLIPFVH 384
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
+ T + + F I AN+ +PI+S++V+P L++ LL +
Sbjct: 385 ---------LQTGLLILLAPIQMGLFQGINFMSFWANLWLVPIVSWLVVPLILLSFLLYL 435
Query: 139 LSLDNIPFGVMAWGLDIIIHI 159
I ++ +D II I
Sbjct: 436 FPSAAIHHFILQL-IDSIISI 455
>gi|331701118|ref|YP_004398077.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus buchneri NRRL B-30929]
gi|329128461|gb|AEB73014.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus buchneri NRRL B-30929]
Length = 730
Score = 44.8 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 76/247 (30%), Gaps = 51/247 (20%)
Query: 22 RLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFL 81
L P G+ ++ I++ +K+S IKQ+ L
Sbjct: 297 LLLLPEAMFLMGV-QLSYGLSLGLIAS----------------------EKLSYIKQTIL 333
Query: 82 NEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL 141
L+ H + + N++ +P+ V+ P +I +++
Sbjct: 334 LNFL----------TVPILLFHLYEWHFLSVAVNLIVLPLFGRVIFPLVIIGVIV----- 378
Query: 142 DNIPFGVMAWGLDIIIHI----AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
+ + +D+ +HI + +S G+ P V I++ +++ +
Sbjct: 379 -GLVAETLVLPIDMFLHIFNDGLNAVSRLPGMLTFGK-PALPIVLIMLAVTMLLAVVDRV 436
Query: 198 R---HIGSIMIGITIIILFTFPYSFSPDLLIS-EKGNLVALVDKNTL---ISNYSNPPSF 250
R IG + + + + +G+ + + + + F
Sbjct: 437 RAPKLIGILAAVYLVTYCWIHFPLNGEVTMFDIGQGDSFLIREPFNRSVTLIDTGGKVQF 496
Query: 251 IFSQWKS 257
W+
Sbjct: 497 NTQPWQK 503
>gi|313156828|gb|EFR56268.1| ComEC/Rec2-like protein [Alistipes sp. HGB5]
Length = 508
Score = 44.8 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 15/133 (11%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D +F + ++AI + + + + + + +
Sbjct: 350 DISFQLSFAAVAAILAW------------GVPLCRRLRTRRRALNPITDALAVSLAATLA 397
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG-VMAWGLD 154
+ + F +P+ G++ N AI + S VV+ L +L+ + F V++ +
Sbjct: 398 TAPLVSHTFGIVPLAGVVVNPAAILLGSVVVLAGALW--MLLPVGWAAPAFECVLSHTAE 455
Query: 155 IIIHIAHRISVAH 167
+ +A +
Sbjct: 456 GLNALARVTADLP 468
>gi|217967491|ref|YP_002352997.1| ComEC/Rec2-related protein [Dictyoglomus turgidum DSM 6724]
gi|217336590|gb|ACK42383.1| ComEC/Rec2-related protein [Dictyoglomus turgidum DSM 6724]
Length = 448
Score = 44.8 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 25/155 (16%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ ++ D A + + + P LF+ +F Y + + Y
Sbjct: 280 FLLRREEDNLNAIFWVAFVNLVISPLK-----LFNVSFQLSYLAMLGLLY---------- 324
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + I +S + + I +F + +IAN AIPI
Sbjct: 325 KPNFSKFLPAYLQEIWES---------SFWLMIFLAPLNIYYFGSLKPISIIANFFAIPI 375
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
S V+ + ++ L + I +++ +DI+
Sbjct: 376 FSLVLF-FSFLYLIGFSLPMGFIFEKILSKLIDIL 409
>gi|271963803|ref|YP_003337999.1| hydrolase (metallo-beta-lactamase superfamily)-like protein
[Streptosporangium roseum DSM 43021]
gi|270506978|gb|ACZ85256.1| hydrolase (metallo-beta-lactamase superfamily)- like protein
[Streptosporangium roseum DSM 43021]
Length = 798
Score = 44.4 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 22/215 (10%), Positives = 56/215 (26%), Gaps = 17/215 (7%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ I W+ + + + A+
Sbjct: 361 YGFALSVCATGGILVLAPR--------------WRDRLATRMPRWAAEAIAVPAAAQAAV 406
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI-LSLDNIPFGVMAWGLDI 155
+ L+ + + AN+LA P ++ + + A++ + + L +
Sbjct: 407 TPVLVLMSGQLAPVAIPANLLAGPAVAPATLLGSVAALVAPLHMGLARLLIHPAGLAAGW 466
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEF-LLMVFCKTNIRHIGSIMIGITIIILFT 214
II +A + + + V + ++ + ++ + I+ T
Sbjct: 467 IIEVAEHAAGTPLAVIPWPGGVAGLIALAVAVPVAILVLRRRWSRRIALAVAAGAIVAVT 526
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
LVA + P
Sbjct: 527 MAEPIVARWP-PRDWLLVACDVGQGDALLVAAGPG 560
>gi|325265729|ref|ZP_08132418.1| competence factor transporting permease/ATP-binding protein ComA
[Kingella denitrificans ATCC 33394]
gi|324982860|gb|EGC18483.1| competence factor transporting permease/ATP-binding protein ComA
[Kingella denitrificans ATCC 33394]
Length = 760
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 49/143 (34%), Gaps = 15/143 (10%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
L P+ G F + + + + + T +
Sbjct: 332 VLLYQPASVLAAG-----FWLSFGLVGVLLWAL--------ACRLPAQTVTRRQYYVHGL 378
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+R + S+ + F +P + + N +AIP+ S++++P L A +L + +
Sbjct: 379 KQAVRGQW--AATLVGSLATLHLFGAMPPFSPLVNAVAIPLFSWLLVPLALAASVLHLPA 436
Query: 141 LDNIPFGVMAWGLDIIIHIAHRI 163
L + I++ + ++
Sbjct: 437 LQQAAAYIGEHIAQILLTLGAQL 459
>gi|168179400|ref|ZP_02614064.1| ComEC/Rec2 family protein [Clostridium botulinum NCTC 2916]
gi|182669522|gb|EDT81498.1| ComEC/Rec2 family protein [Clostridium botulinum NCTC 2916]
Length = 595
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 21/158 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+KYD + + I L+ P D F + I +
Sbjct: 256 RKYDSLSSISLAAIIILLNKPYYML-----DIGFMLSFLSTLGILLYNKK---------- 300
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + Q + + + ++ + +I N++ +P+ + +
Sbjct: 301 ---ISRTLYKLPQRINSCVSLTLS--SQIYTFPYMCFTIQSFGLGFIIGNLVLVPLYAPI 355
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
V+ L +L+ I + I ++ L I+I A +
Sbjct: 356 VLLGNLAMLLIKIPFVFKIINKIIYIFL-IMIEGAQYL 392
>gi|148380921|ref|YP_001255462.1| ComEC/Rec2 family protein [Clostridium botulinum A str. ATCC 3502]
gi|153934337|ref|YP_001385229.1| ComEC/Rec2 family protein [Clostridium botulinum A str. ATCC 19397]
gi|153935611|ref|YP_001388698.1| ComEC/Rec2 family protein [Clostridium botulinum A str. Hall]
gi|148290405|emb|CAL84532.1| putative competence protein [Clostridium botulinum A str. ATCC
3502]
gi|152930381|gb|ABS35881.1| ComEC/Rec2 family protein [Clostridium botulinum A str. ATCC 19397]
gi|152931525|gb|ABS37024.1| ComEC/Rec2 family protein [Clostridium botulinum A str. Hall]
Length = 595
Score = 44.4 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 21/158 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+KYD + + I L+ P D F + I +
Sbjct: 256 RKYDSLSSISLAAIIILLNKPYYIL-----DIGFMLSFLSTLGILLYNKK---------- 300
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + Q + + + ++ + +I N++ +P+ + +
Sbjct: 301 ---ISRTLYKLPQRINSCLSLTLS--SQIYTFPYMCFTIQSFGLGFIIGNLVLVPLYAPI 355
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
V+ L +L+ I + I ++ L I+I A +
Sbjct: 356 VLLGNLAMLLIKIPFVFKIINKIIYIFL-IMIEGAQYL 392
>gi|284044285|ref|YP_003394625.1| ComEC/Rec2-related protein [Conexibacter woesei DSM 14684]
gi|283948506|gb|ADB51250.1| ComEC/Rec2-related protein [Conexibacter woesei DSM 14684]
Length = 523
Score = 44.4 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 1/152 (0%)
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
++ + + + L+ HF + + L AN+LA P ++ V+ L
Sbjct: 371 RLRRRGAPAPVADAVAMSLAATLGTAPLLVFHFGELSLVSLPANLLAAPAIAPVMWLGML 430
Query: 132 IAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
A + + + +PF M L + IAH + + +P T + V + +
Sbjct: 431 AAAVGQLAAALALPFNAMNAFLLGYVGTIAHEAAGVPHASTRAALPGTVALVAVYGVVGV 490
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ R + + P S S
Sbjct: 491 LVALLRTRKGARMPGTASSANASPPPSSTSMM 522
>gi|148549023|ref|YP_001269125.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida F1]
gi|148513081|gb|ABQ79941.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida F1]
Length = 738
Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 86/272 (31%), Gaps = 26/272 (9%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P PG F + ++ + Y +S + WT +
Sbjct: 317 FEPLAALLPG-----FWLSFAAVATLIYCFSA--RLGGWRPWQAWTRAQWVIAVGLLPVL 369
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLD 142
+ + + + +AN++A+P +S V+P L+ L++ L +
Sbjct: 370 LATGLP-----------------VSLSAPLANLVAVPWVSLAVLPLALLGTLMLPLAGVG 412
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIG 201
+ LD++ ++ + +P + + + + LL++ + +R +G
Sbjct: 413 EALLWLAGGLLDVLFRGLALVAQQRPAWVPPALPWWAGLLVCLGALLLLLPRGVPLRGLG 472
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALIT 261
+M+ + P+ + L L+ Y P+ S ++
Sbjct: 473 GVMLLALWVPREPVPFGQIEVWQLDVGQGLAVLLRTRHHSLLYDAGPARGESDLGERVVL 532
Query: 262 PFHEAPHVQKEDLQEKNQSSLKEILRSMQPRK 293
P V D+ + + + +
Sbjct: 533 PTLRKLGVGGLDVMVISHAHADHAGGAEAIAR 564
>gi|170760301|ref|YP_001788282.1| ComEC/Rec2 family protein [Clostridium botulinum A3 str. Loch
Maree]
gi|169407290|gb|ACA55701.1| ComEC/Rec2 family protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 595
Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 21/158 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+KYD + + I L+ P D F + I +
Sbjct: 256 RKYDSLSSISLAAIIILLNKPYYIL-----DIGFMLSFLSTLGILLYNKK---------- 300
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + Q + + + ++ + +I N++ +P+ + +
Sbjct: 301 ---ISRTLYKLPQRINSCVSLTLS--SQIYTFPYMCFTIQSFGLGFIIGNLVLVPLYAPI 355
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
V+ L +L+ I + I ++ L I+I A +
Sbjct: 356 VLLGNLAMLLIKIPFVFKIINKIIYIFL-IMIEGAQYL 392
>gi|153938589|ref|YP_001392246.1| ComEC/Rec2 family protein [Clostridium botulinum F str. Langeland]
gi|152934485|gb|ABS39983.1| ComEC/Rec2 family protein [Clostridium botulinum F str. Langeland]
gi|295320243|gb|ADG00621.1| ComEC/Rec2 family protein [Clostridium botulinum F str. 230613]
Length = 595
Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 21/158 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+KYD + + I L+ P D F + I +
Sbjct: 256 RKYDSLSSISLAAIIILLNKPYYIL-----DIGFMLSFLSTLGILLYNKK---------- 300
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + Q + + + ++ + +I N++ +P+ + +
Sbjct: 301 ---ISRTLYKLPQRINSCVSLTLS--SQIYTFPYMCFTIQSFGLGFIIGNLVLVPLYAPI 355
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
V+ L +L+ I + I ++ L I+I A +
Sbjct: 356 VLLGNLAMLLIKIPFVFKIINKIIYIFL-IMIEGAQYL 392
>gi|169628717|ref|YP_001702366.1| hypothetical protein MAB_1627 [Mycobacterium abscessus ATCC 19977]
gi|169240684|emb|CAM61712.1| Conserved hypothetical protein (ComEC/Rec2-related protein?)
[Mycobacterium abscessus]
Length = 505
Score = 44.4 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 23/216 (10%), Positives = 57/216 (26%), Gaps = 20/216 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + L+ G A D F+ +A+ M ++
Sbjct: 307 RRRQAIPALA-ATILVLLAVSPGLAV----DIGFALSVVATAALVVLAPRWSMRLTARGW 361
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + + + + AN+LA ++ +
Sbjct: 362 PKPLAD-------------ALCVAVAAQLVTAPVIAAISGSVSMASIAANVLAGLVIVPI 408
Query: 126 VIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ A L ++ + + L ++ +A + A I +V
Sbjct: 409 TVLGTAAAALTVVSPQVAGLLARFCGPELWWLLRVADY-ASAGGTTAIPVPAGVLGFAVV 467
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
L + R ++ + L +
Sbjct: 468 AVLLGIAVWLWRRRWFRGLVWTGVLCALALMISARV 503
>gi|268686053|ref|ZP_06152915.1| ComA [Neisseria gonorrhoeae SK-93-1035]
gi|268626337|gb|EEZ58737.1| ComA [Neisseria gonorrhoeae SK-93-1035]
Length = 691
Score = 44.4 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 311 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 353 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 402
>gi|268600797|ref|ZP_06134964.1| ComA [Neisseria gonorrhoeae PID18]
gi|268584928|gb|EEZ49604.1| ComA [Neisseria gonorrhoeae PID18]
Length = 691
Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 311 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 353 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 402
>gi|138896088|ref|YP_001126541.1| DNA internalization-related competence protein ComEC [Geobacillus
thermodenitrificans NG80-2]
gi|134267601|gb|ABO67796.1| DNA internalization-related competence protein ComEC [Geobacillus
thermodenitrificans NG80-2]
Length = 748
Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 25/234 (10%), Positives = 69/234 (29%), Gaps = 32/234 (13%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D F + + + + +
Sbjct: 320 MLWDVGFQLSFAVTFVLLVHFPA--------------------LAARSMIGRLCETALAA 359
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+A L+ HF+ I ++ + N+L +P+ SFV++P + L + +
Sbjct: 360 QLAALPILLYHFYEISIWSVGLNVLFVPLYSFVILPLAFVVAAL-PFP---PLVWLFSCL 415
Query: 153 LDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+++ ++ S +GR V ++ + + + ++
Sbjct: 416 IELTNNVVRFFSVDHPLTIVLGRPEPWCLAVYVAAVVVALLLWERGQLFRGLAAVAMAMV 475
Query: 212 LFTFPYSFSPDLLIS----EKGNLVALVDKNT---LISNYSNPPSFIFSQWKSA 258
L P ++ +G+ + + + + + P +W+
Sbjct: 476 LQLVSPYVDPKGEVTVLDVGQGDCLYIELPHRKAIYLIDTGGTPKIKGERWRER 529
>gi|281413759|ref|ZP_06245501.1| Putative ComEC/Rec2-related protein [Micrococcus luteus NCTC 2665]
Length = 627
Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 18/169 (10%), Positives = 45/169 (26%), Gaps = 12/169 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + I + ++ + + +
Sbjct: 143 AFHLSLAATAGIVL------GGAPLDRALHAGLGRVMPDVVARWLSASLAVTVAAHLACQ 196
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDII 156
++ + Y + AN+LA P + V + L A L + + V+ W I
Sbjct: 197 PIILAMTGEVSAYAVPANLLAAPAVPPVTVLGTLAAALALPAPGIAAALVAVIQWPAAWI 256
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+AH + + +++ T + +++
Sbjct: 257 GWVAHTSASLPGALR-----PWPAGALGAGLGVLLVAATLLGFAAVLLL 300
>gi|295110585|emb|CBL24538.1| DNA internalization-related competence protein ComEC/Rec2
[Ruminococcus obeum A2-162]
Length = 725
Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 47/132 (35%), Gaps = 19/132 (14%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + + A + PA+ L++ +F + + IG + + + +
Sbjct: 271 YDLLSAMALSAIVLLLDAPAY--LYNVSFLLSFGAVIGIGALTPEICSLLNLKKRTAKSL 328
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + + + + G+I N+L +P S +V+ +G
Sbjct: 329 AGSVIVW----------------LITLPIALHAYGEVSLAGVILNLLVLP-TSGIVLASG 371
Query: 131 LIAILLMILSLD 142
+ A+ + I ++
Sbjct: 372 IFALPVGIFVIE 383
>gi|227488358|ref|ZP_03918674.1| membrane metal-binding protein ComEC [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091572|gb|EEI26884.1| membrane metal-binding protein ComEC [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 527
Score = 44.4 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 18/192 (9%), Positives = 54/192 (28%), Gaps = 19/192 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I + ++ I A +
Sbjct: 291 YGFALSVAATAGIVVVSPLIAQALGFLPDLLARALAVAIAADVVTMPIIALMS------- 343
Query: 97 SIFLIKHFHCIPVYGLIANILA-IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ + ++AN+LA I + V+ +L+ + + + G
Sbjct: 344 --------GRVSLVSVVANLLAGIAVAPVTVLGLCGAVAMLLPGGGEGVFIRLAEPGAWW 395
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
I +A + + ++ +V +++ + + R + +++ + I
Sbjct: 396 IHAVATWANNLPHATVGISA---AWAVVVAGWIVYLILDGHPRLVATVVALVVIGGGHLP 452
Query: 216 PYSFSPDLLISE 227
+ P
Sbjct: 453 WRAGPPQATFDA 464
>gi|167624429|ref|YP_001674723.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
halifaxensis HAW-EB4]
gi|167354451|gb|ABZ77064.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella halifaxensis HAW-EB4]
Length = 783
Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 32/269 (11%), Positives = 84/269 (31%), Gaps = 28/269 (10%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
++ + I + P G F + ++ I + + +
Sbjct: 294 ALKTHSSSWERLLYALFIVLVLDPLSMLSAG-----FWLSFSALAIILLTVTQYRFSDEA 348
Query: 63 ES----------HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL 112
S +W S ++ + L+ + + F + L
Sbjct: 349 GSNIGLSPSESVATSWNLTLWSKLRMAALSFWAVQWRL--TLGLCVVQAIFFSGASMASL 406
Query: 113 IANILAIPILSFVVIPAGLIAILLMI----LSLDNIPFGVMAW-GLDIIIHIAHRISVAH 167
+ N+L +P + ++IP L+++L+ I + V+A + ++ I + S
Sbjct: 407 VVNLLLVPWFTLLLIPISLLSLLVFILLTNFGISAPGVFVLAAYAMSPVVSILNYSSSVD 466
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIG---SIMIGITIIILFTFPYSFSPD 222
+ + + + + L + + R + I + +TI+
Sbjct: 467 FVWLDLANEVIAALMVALIGLYLTVNFKQWPWRILLSVMFIPLLLTILFRLMPIDDKRWQ 526
Query: 223 LLISEKGNLVALVDKNT-LISNYSNPPSF 250
+ + + G ++LV + Y +
Sbjct: 527 VHLLDVGQGLSLVIEQGKRAIIYDTGARY 555
>gi|254493183|ref|ZP_05106354.1| competence protein comA [Neisseria gonorrhoeae 1291]
gi|1705994|sp|P51973|COMA_NEIGO RecName: Full=Competence protein ComA
gi|913748|gb|AAB32261.1| ComA [Neisseria gonorrhoeae]
gi|226512223|gb|EEH61568.1| competence protein comA [Neisseria gonorrhoeae 1291]
Length = 691
Score = 44.0 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 311 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 353 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 402
>gi|226950395|ref|YP_002805486.1| ComEC/Rec2 family protein [Clostridium botulinum A2 str. Kyoto]
gi|226843057|gb|ACO85723.1| ComEC/Rec2 family protein [Clostridium botulinum A2 str. Kyoto]
Length = 595
Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 21/158 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+KYD + + I L+ P D F + I +
Sbjct: 256 RKYDSLSSISLAAIIILLNKPYYIL-----DIGFMLSFLSTIGILLYNKK---------- 300
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + Q + + + ++ + +I N++ +P+ + +
Sbjct: 301 ---ISRTLYKLPQRINSCVSLTLS--SQVYTFPYMCFTIQSFGLGFIIGNLVLVPLYAPI 355
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
V+ L +L+ I + I ++ L I+I A +
Sbjct: 356 VLLGNLAMLLIKIPFVFKIINKIIYIFL-IMIEGAQYL 392
>gi|225874141|ref|YP_002755600.1| DNA internalization-related competence protein ComEC/Rec2
[Acidobacterium capsulatum ATCC 51196]
gi|225793288|gb|ACO33378.1| DNA internalization-related competence protein ComEC/Rec2
[Acidobacterium capsulatum ATCC 51196]
Length = 902
Score = 44.0 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 52/163 (31%), Gaps = 1/163 (0%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ ++ + A+ ++ + FH I + GL N+L +
Sbjct: 473 RWPLRTRVMRYLLPKLLRICLRIAELVIVTVAIEAAMALPMAVDFHRITIAGLPVNLLIV 532
Query: 120 PILSFVV-IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
P++ ++ + + +L + +L IP A L ++ + A P
Sbjct: 533 PLIGILLPLAIATLLCVLAVPTLAVIPAAGTALFLHFVLFLVTYFGDARLGNWRVPEPLA 592
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + L+M R +G + + + P
Sbjct: 593 LQLAGCLVLLVMGMGMLRWRRMGWVPGVALVALSVAVLLWPRP 635
>gi|269960985|ref|ZP_06175354.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834204|gb|EEZ88294.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 752
Score = 44.0 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 44/155 (28%), Gaps = 22/155 (14%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P+ I P +F Y S+ ++ +
Sbjct: 306 WSPWRVLLLAVSIQLCLEPFATLN-----ISFWLSY---------LSVVAVLLAVNVVQQ 351
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
I+ + + + F + + N++ IP F+V+
Sbjct: 352 AQGHWIAKL------TALLKVQLVLTMLIIPISGVFFSGTSLSSIAYNLIFIPWFGFIVV 405
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
P IA++ LS D ++ LD ++
Sbjct: 406 PLMFIALIATPLSDD--IAALLWQCLDWVLWPLSW 438
>gi|268683811|ref|ZP_06150673.1| ComA [Neisseria gonorrhoeae SK-92-679]
gi|268624095|gb|EEZ56495.1| ComA [Neisseria gonorrhoeae SK-92-679]
Length = 710
Score = 44.0 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 277 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 329
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 330 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 371
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 372 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 421
>gi|261364460|ref|ZP_05977343.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria mucosa ATCC 25996]
gi|288567382|gb|EFC88942.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria mucosa ATCC 25996]
Length = 741
Score = 44.0 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 58/206 (28%), Gaps = 33/206 (16%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ L P + ++A+ + + W
Sbjct: 320 ALAVVLLIDPLAVLG-----VGTWLSFGLVAALIWASAGRLKERGWRLAVRGQW------ 368
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ + + L F +P+ + N IP S+V+ P L+ +L
Sbjct: 369 --------------AATVLSVVLLGYIFASLPIISPLVNAAMIPWFSWVLTPLALLGSVL 414
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
L G+ + L ++ +A EF I P V + LL + +
Sbjct: 415 PFAPLQWAAAGLAEYTLRGLVWLAE----VSPEFAIAAAPVPLLVLAFLAALLWLLPRG- 469
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPD 222
+G ++ F F D
Sbjct: 470 ---LGLRPWACLVLAGFVFYRLDRLD 492
>gi|288940586|ref|YP_003442826.1| DNA internalization-related competence protein ComEC/Rec2
[Allochromatium vinosum DSM 180]
gi|288895958|gb|ADC61794.1| DNA internalization-related competence protein ComEC/Rec2
[Allochromatium vinosum DSM 180]
Length = 775
Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 78/253 (30%), Gaps = 30/253 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + P+ A + P + F + ++ +
Sbjct: 314 LFWQRTLRPYQALRLALVGVLVWDPGAVLS-----YGFWLSFGAVAFLLLHLGQRLPGRD 368
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + L + + N++A+P+
Sbjct: 369 LWTRWGRAQWAVGLGLLPLLFLFFG-------------------QASLIAPLVNLVAVPL 409
Query: 122 LSFVVIPAGLIAILLMILSLD--NIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPET 178
S ++P LIA LL ++ + +P ++A GL ++ ++ + P
Sbjct: 410 FSAPILPLVLIASLLSLVPVTGFAVPLRLVADGLGWCLNGLDWLAAQPWSAVHLPAQPLW 469
Query: 179 SFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFP--YSFSPDLLISEKGNLVALV 235
++ + ++ +L++ + R +G I++ + P LL +G +
Sbjct: 470 AWGSALLGAVLLLAPRGLPGRWLGWILMLPLVAARPATPGWGEVWFSLLDVGQGQAAVVE 529
Query: 236 DKNTLISNYSNPP 248
+ ++ + P
Sbjct: 530 TLDGILVYDAGPA 542
>gi|268598443|ref|ZP_06132610.1| ComA [Neisseria gonorrhoeae MS11]
gi|268582574|gb|EEZ47250.1| ComA [Neisseria gonorrhoeae MS11]
Length = 710
Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 277 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 329
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 330 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 371
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 372 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 421
>gi|170756362|ref|YP_001782602.1| ComE operon protein 3 [Clostridium botulinum B1 str. Okra]
gi|169121574|gb|ACA45410.1| ComE operon protein 3 [Clostridium botulinum B1 str. Okra]
Length = 427
Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 21/158 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+KYD + + I L+ P D F + I +
Sbjct: 88 RKYDSLSSISLAAIIILLNKPYYIL-----DIGFMLSFLSTLGILLYNKK---------- 132
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + Q + + + ++ + +I N++ +P+ + +
Sbjct: 133 ---ISRTLYKLPQRINSCVSLTLS--SQVYTFPYMCFTIQSFGLGFIIGNLVLVPLYAPI 187
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
V+ L +L+ I + I ++ L I+I A +
Sbjct: 188 VLLGNLAMLLIKIPFVFKIINKIIYIFL-IMIEGAQYL 224
>gi|323483819|ref|ZP_08089197.1| DNA internalization-like competence protein ComEC/Rec2 [Clostridium
symbiosum WAL-14163]
gi|323402841|gb|EGA95161.1| DNA internalization-like competence protein ComEC/Rec2 [Clostridium
symbiosum WAL-14163]
Length = 818
Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 22/116 (18%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + + L P LF Y + A+G K+ S
Sbjct: 308 YDLLSAMALSLILLASDSPYL--LFTSGLQLSYGAVGAVGLA-GNMKIHGSPLFTT---- 360
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ ++ HF P+YGL N++ IP++++
Sbjct: 361 ---------------MSASIAIQIVTLPVILYHFFEFPLYGLFLNLVVIPLMAYAA 401
>gi|221194552|ref|ZP_03567609.1| DNA internalization-related competence protein ComEC/Rec2
[Atopobium rimae ATCC 49626]
gi|221185456|gb|EEE17846.1| DNA internalization-related competence protein ComEC/Rec2
[Atopobium rimae ATCC 49626]
Length = 712
Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 23/276 (8%), Positives = 82/276 (29%), Gaps = 32/276 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF-----YSIPKM 58
+ ++ +P + T+ L P+ +F + + + Y +
Sbjct: 236 LGRRKNPLASTCTLAFCMILVQPAICES-----ISFLLSLCSVLGLMVYGAYGRYGWRTI 290
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
S K S + F + + + N L
Sbjct: 291 TPRIISQRCPYTFKKRSNAFIQTGSDAIATTIVAQLATFPITTTIFGRLSLIAPVVNAL- 349
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMA---WGLDII----IHIAHRISVAHNEFC 171
+ IP ++ +L ++ + + +D + + + +
Sbjct: 350 ------LAIPFSILVVLGFLIFCTLPFSFITTTLLYEVDFVGAVFVTLVRLFAHIPMSSI 403
Query: 172 IGRIPET-SFVTIVVEFLLMVFCKTNIR-----HIGSIMIGITIIILFTFPYSFSPDLLI 225
+ +P ++ ++ ++++ +IR ++++ + + Y + +
Sbjct: 404 LIDVPTYIVWLGFILIQIVLLIWWPDIRPKIVLLCVALVVAGCTCHVIRWRYFAPARVCV 463
Query: 226 SE--KGNLVALVDKNTLISNYSNPPSFIFSQWKSAL 259
+ +G+ + + D + + ++P + +
Sbjct: 464 MDIGQGDAILVTDGASSMLIDTSPNDAVLDALQRQN 499
>gi|153837345|ref|ZP_01990012.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
parahaemolyticus AQ3810]
gi|149749376|gb|EDM60149.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
parahaemolyticus AQ3810]
Length = 752
Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 34/221 (15%), Positives = 72/221 (32%), Gaps = 22/221 (9%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F Y + A+ + NT K + + + + I +
Sbjct: 326 ASFSLSFWLSYLSVGAVLFA------------VNTVQDSKEGRLGKLRILLLTQLILSLL 373
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL-MILSLDNIPFGVMAW 151
F L+ N++ IP FVV+P A++ ++ + +
Sbjct: 374 IV---PISGYFFSGFSWSSLVYNLVFIPWFGFVVVPIMFAALIASLLFPMLATVLWYL-- 428
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITI 209
LDI + E +FV V+ +L+ + +++ +T
Sbjct: 429 -LDIFLVPLSWSVRYAIGTWQPISAEWTFVIAVMSAVLVSRHVMPRYVWMFVCVIVVMTG 487
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ + ++ D+L L LV+K + Y ++
Sbjct: 488 LFPKQYNQTWRIDVL-DVGHGLAVLVEKEGRVLLYDTGKAW 527
>gi|317062267|ref|ZP_07926752.1| COME operon protein 3 [Fusobacterium ulcerans ATCC 49185]
gi|313687943|gb|EFS24778.1| COME operon protein 3 [Fusobacterium ulcerans ATCC 49185]
Length = 257
Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 16/136 (11%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+ + +F Y + AI Y + + + + + T
Sbjct: 90 SMNEVSFILSYLAVFAIICIYPLIRKVIYKGKSK---------------FVEKLILLTTI 134
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ LIK F I +N++ +P+ + I + + L L L I F +
Sbjct: 135 QFFLTPILIKEFGTIQFLSFFSNLIILPV-GTLYILLAFVGLFLENLGLGFIVFPITNIV 193
Query: 153 LDIIIHIAHRISVAHN 168
+I + + S
Sbjct: 194 FEIFMKLVEIFSKIPG 209
>gi|213421793|ref|ZP_03354859.1| hypothetical protein Salmonentericaenterica_30338 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 186
Score = 44.0 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 43/125 (34%), Gaps = 15/125 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+ ++ + ++Y + + ++ +
Sbjct: 5 SLWLSAFAVAGLLFWYQWFPAPNGNFP------------RGLRWLLNLLHLQAGITLLLL 52
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGLD 154
+ FH I V ++AN+ A+P ++FV +P L ++L L+ + + L
Sbjct: 53 PLQVALFHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALA 112
Query: 155 IIIHI 159
+ ++
Sbjct: 113 ALFYL 117
>gi|307544569|ref|YP_003897048.1| ComEC-type competence protein [Halomonas elongata DSM 2581]
gi|307216593|emb|CBV41863.1| ComEC-type competence protein [Halomonas elongata DSM 2581]
Length = 779
Score = 44.0 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 3/235 (1%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
ARL PP+G A PG FD+ + +GI A GY P +E+ +
Sbjct: 128 IQVGERWRLTARLRPPAGAANPGTFDYRGWLWREGIQATGYLRQTPAPHRLAEAGVSVRR 187
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
++ + + L + + A L + +++ I L ++ A
Sbjct: 188 LALAHLDEQGLAPRPSRWLAALTLGAERRLEAQDWELLNASGTTHLVVISGLHIGLVAAF 247
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ + ++ MA A ++ + P + + + L +
Sbjct: 248 ALGVARLLARCLMPGRWRMAI---WPWWFAGMVAAGYALLAGLEAPAMRALVMALVGLWV 304
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS 245
+ + + + +I+L ++ P L +S + ++
Sbjct: 305 ASGRHAPGAWQAWWLALALILLLDPLSAWRPGLWLSFLAVALLILIWQGRSRPRG 359
>gi|325679250|ref|ZP_08158837.1| ComEC/Rec2-like protein [Ruminococcus albus 8]
gi|324109036|gb|EGC03265.1| ComEC/Rec2-like protein [Ruminococcus albus 8]
Length = 653
Score = 44.0 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 17/212 (8%), Positives = 58/212 (27%), Gaps = 25/212 (11%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + AI + S + K S++ + + + +
Sbjct: 328 SFVLSFLAVLAI--------ELVSLNKGDDEERKPERSLR----------VSSAVLFTTA 369
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F + V ++ N+ +P+ + + + + + + + A + ++
Sbjct: 370 PASAAFFGGVSVMSVLTNLFLVPLCTVSLQLSFAVLLTGGTSLVGRPLVKLAALPVRFVL 429
Query: 158 HIAHRISVA--HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII---- 211
A ++ F + + + N R ++ + +
Sbjct: 430 FCADYLADIRYSYIFTAPNFVFWLVIVTSAVMTAVCVFQKNSRRYLLSVMAVIAVWCAAA 489
Query: 212 -LFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + ++ +V K
Sbjct: 490 NITLWADDSVKITILPGGRKTAYVVSKQGSAV 521
>gi|28897755|ref|NP_797360.1| Rec2-like protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260363818|ref|ZP_05776573.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus K5030]
gi|260876922|ref|ZP_05889277.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus AN-5034]
gi|260897936|ref|ZP_05906432.1| competence protein ComEC/Rec2 [Vibrio parahaemolyticus Peru-466]
gi|260903471|ref|ZP_05911866.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus AQ4037]
gi|28805968|dbj|BAC59244.1| Rec2-related protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308085490|gb|EFO35185.1| competence protein ComEC/Rec2 [Vibrio parahaemolyticus Peru-466]
gi|308093720|gb|EFO43415.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus AN-5034]
gi|308110349|gb|EFO47889.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus AQ4037]
gi|308113906|gb|EFO51446.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus K5030]
Length = 752
Score = 44.0 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 72/221 (32%), Gaps = 22/221 (9%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F Y + A+ + NT K + + + + I +
Sbjct: 326 ASFSLSFWLSYLSVGAVLFA------------VNTVQDSKEGRLGKLRILLLTQLILSLL 373
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL-MILSLDNIPFGVMAW 151
F L+ N++ IP FVV+P A++ ++ + +
Sbjct: 374 IV---PISGYFFSGFSWSSLVYNLVFIPWFGFVVVPIMFAALIASLLFPMLATVLWYL-- 428
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITI 209
LDI + E +FV VV +L+ + +++ +T
Sbjct: 429 -LDIFLVPLSWSVRYAIGTWQPISAEWTFVIAVVSAVLVSRHVMPRYVWMFVCVIVVMTG 487
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ + ++ D+L L LV+K + Y ++
Sbjct: 488 LFPKQYNQTWRIDVL-DVGHGLAVLVEKEGRVLLYDTGKAW 527
>gi|255264815|ref|ZP_05344157.1| competence protein [Thalassiobium sp. R2A62]
gi|255107150|gb|EET49824.1| competence protein [Thalassiobium sp. R2A62]
Length = 254
Score = 44.0 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ P + LSPP+GP PG FDF ++++ + A+G Y+ ++ +
Sbjct: 131 FVPLELGLHVMTTGHLSPPAGPPEPGRFDFRRMAWFERLGAVG--YTRAPVLAAGPDAPD 188
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ I++ ++ IG A A+
Sbjct: 189 GAGLWVYKIRRQLSLTVQDQIGGEVGAFAAAITT 222
>gi|213583579|ref|ZP_03365405.1| hypothetical protein SentesTyph_21143 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 171
Score = 44.0 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 43/125 (34%), Gaps = 15/125 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+ ++ + ++Y + + ++ +
Sbjct: 12 SLWLSAFAVAGLLFWYQWFPAPNGNFP------------RGLRWLLNLLHLQAGITLLLL 59
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGLD 154
+ FH I V ++AN+ A+P ++FV +P L ++L L+ + + L
Sbjct: 60 PLQVALFHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALA 119
Query: 155 IIIHI 159
+ ++
Sbjct: 120 ALFYL 124
>gi|212697094|ref|ZP_03305222.1| hypothetical protein ANHYDRO_01659 [Anaerococcus hydrogenalis DSM
7454]
gi|212675869|gb|EEB35476.1| hypothetical protein ANHYDRO_01659 [Anaerococcus hydrogenalis DSM
7454]
Length = 720
Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 23/177 (12%), Positives = 54/177 (30%), Gaps = 27/177 (15%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+ P G F +F + + + P ++ K+
Sbjct: 303 LLILFFNPFAIFNSGFF-LSFLAGFA------IYVIYPSLVRG---------------KK 340
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
+ + + +I ++ + AN L IPI + + + I+L
Sbjct: 341 YSYIKKSLIFTLTLQVTLAFHIIYYYGFFNLLSFFANFLVIPIFT-ISMYIIFGIIILYP 399
Query: 139 L--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L I F ++ + + I++I ++ P+ S + +L+
Sbjct: 400 FLGGLLGIFFYILDFLIGSILNIVSFLNSF--SIFSLEFPKESILICFYYLILLFIM 454
>gi|268594324|ref|ZP_06128491.1| competence protein comA [Neisseria gonorrhoeae 35/02]
gi|268547713|gb|EEZ43131.1| competence protein comA [Neisseria gonorrhoeae 35/02]
Length = 704
Score = 43.6 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 271 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 323
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 324 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 365
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 366 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 415
>gi|293571937|ref|ZP_06682951.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E980]
gi|291607955|gb|EFF37263.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E980]
Length = 695
Score = 43.6 bits (101), Expect = 0.051, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 82/231 (35%), Gaps = 13/231 (5%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 252 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWMKKTASHVLFTMITMPLIV 310
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ P+ G + +L P+ F+ +P+ L +P ++ + +I
Sbjct: 311 WHFYEWPLLGSLFTLLVAPVFKFLFLPSVFFLTLFN----RWLPRTLLLLIEEGLILFER 366
Query: 162 RISVAHNEFCI-GRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIIILFTFPYS 218
I + GR+P + L+ + + ++ + + + +++ F
Sbjct: 367 MIDSFSGSTLVIGRLPLVLSGVYIFGLLICMDRLNEQPMKLLFYVGLFSLMLLTLPFLRF 426
Query: 219 FSPDLLIS-EKGNLVALVDK---NTLISNYSNPPSFIFSQWKSALITPFHE 265
S + I +G+ + L T++ + F +W ++ P E
Sbjct: 427 SSTIVFIDVGQGDSIFLQSPFRKETILIDTGGKLHFEREKWAQGIVRPPAE 477
>gi|167769104|ref|ZP_02441157.1| hypothetical protein ANACOL_00427 [Anaerotruncus colihominis DSM
17241]
gi|167668744|gb|EDS12874.1| hypothetical protein ANACOL_00427 [Anaerotruncus colihominis DSM
17241]
Length = 694
Score = 43.6 bits (101), Expect = 0.051, Method: Composition-based stats.
Identities = 54/404 (13%), Positives = 109/404 (26%), Gaps = 44/404 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP--KMI 59
L + + D + I L P GL Y I
Sbjct: 293 LLLGRDSDTLNSLGFALIIILLQNPYAIFSTGL-----QLSYLATMGIAACADPACAWCA 347
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ + +++ + + + + + L F + + +AN+LA
Sbjct: 348 RWIWRMDARSLRRLHPL--GYAALLAFSTSVCAGVFTAPVLCFAFGQLSLVAPVANVLAA 405
Query: 120 PILSFVVIPAGLIAILLMILSLDNIP---FGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
P ++ + L +L I LD + + +I IA R
Sbjct: 406 PFVTPALAGGLLCGLLGFIPPLDVVARACALAGGASIRVINTIASWWGALPFASVPVRAG 465
Query: 177 ETSF--VTIVVEFLLMVFCKTN--IRHIGSIMIGITIIILFTF---PYSFSPDLLISEKG 229
+ ++ L+ + +R + + + ++ + + +L +S+ G
Sbjct: 466 LVTLWMGACILGGALLAANRAPYAVRIYAASLAVVALLSGMLAHAIAWGPTMELAVSQSG 525
Query: 230 NLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSM 289
VAL P S +Q +A + +E S + S
Sbjct: 526 TSVALACGGQGAVI-GEPESVSDAQNLAAFLKDSGVKRISLYAVQEEGALFSNRTHALSK 584
Query: 290 ---QPRKFLCIKKSFCVGCHRSDVIVGVLKRKDM-------------IRLSCQLSDILIT 333
F + I K + +D+LI
Sbjct: 585 ILPVDTAFGLDRTHGFAAELPGARISAEGKDAESISIEMGGLRIVKTFDQIPAAADVLI- 643
Query: 334 TIRDINTKLCNVSLLITPE-------ILQKQGSLEITIIPPSND 370
R V L T L++ G+ + +IP +
Sbjct: 644 NARGQIVAAPGVMLKTTARYYNCEILTLRRTGAAALDVIPHAAA 687
>gi|328473267|gb|EGF44115.1| Rec2-like protein [Vibrio parahaemolyticus 10329]
Length = 752
Score = 43.6 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 72/221 (32%), Gaps = 22/221 (9%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F Y + A+ + NT K + + + + I +
Sbjct: 326 ASFSLSFWLSYLSVGAVLFA------------VNTVQDSKEGRLGKLRILLLTQLILSLL 373
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL-MILSLDNIPFGVMAW 151
F L+ N++ IP FVV+P A++ ++ + +
Sbjct: 374 IV---PISGYFFSGFSWSSLVYNLVFIPWFGFVVVPIMFAALIASLLFPMLATVLWYL-- 428
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITI 209
LDI + E +FV VV +L++ + +++ +T
Sbjct: 429 -LDIFLVPLSWSVRYAIGTWQPISAEWTFVIAVVSAVLVLRHVMPRYVWMFVCVIVVMTG 487
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ ++ D+L L LV+K + Y ++
Sbjct: 488 LFPKQDNQTWRIDVL-DVGHGLAVLVEKEGRVLLYDTGKAW 527
>gi|291044393|ref|ZP_06570102.1| competence protein comA [Neisseria gonorrhoeae DGI2]
gi|291011287|gb|EFE03283.1| competence protein comA [Neisseria gonorrhoeae DGI2]
Length = 759
Score = 43.6 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 326 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 378
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 379 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 420
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 421 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 470
>gi|227015813|gb|ACP17910.1| putative DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas nitroreducens]
Length = 749
Score = 43.6 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 78/212 (36%), Gaps = 26/212 (12%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG F Y ++ + + + + ++ + +
Sbjct: 330 PLVVLLPG-----FWLSYAAVALLIF-------------GFSGRLGRWTAWRTWLRAQWL 371
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNI 144
IG ++ A + V G++AN++A+P + VV+P L+ L + + L
Sbjct: 372 MAIGLLPASMALGLP------LSVSGVVANLIAVPWVEMVVVPLALLGSLALGIPWLGEA 425
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSI 203
V L+++ + ++ + P + + ++ LL++ IR +G
Sbjct: 426 LLWVSGGLLEMLFRLLGWMAGLAPAWQPVAAPAWALLLAMLGALLLLAPAGVPIRALGLA 485
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
M L T P ++ I + G ++++
Sbjct: 486 MFLPVFWPLVTLPPPGQAEVRILDVGQGLSVL 517
>gi|15835572|ref|NP_300096.1| hypothetical protein CPj0035 [Chlamydophila pneumoniae J138]
gi|16753010|ref|NP_445283.1| hypothetical protein CP0741 [Chlamydophila pneumoniae AR39]
gi|7189656|gb|AAF38546.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8978410|dbj|BAA98247.1| CT339 hypothetical protein [Chlamydophila pneumoniae J138]
Length = 487
Score = 43.6 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 20/181 (11%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
G S P P F + I F+ + + + I+
Sbjct: 305 AGFILCSIFFSPFSP-----TFVLSFLATLGILLFFPKIFSFLYTPWTQFLSPFWLYPIR 359
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ I + ++++F +P+ GL+ N+ I+ F ++P + I +
Sbjct: 360 Y---LAMTLAISLSAQLFIVLPIMQYFGSLPLEGLLYNL----IVPFTILPIIVFLIATI 412
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHN---EFCIGRIPETSFVTIVVEFLLMVFCK 194
IL + + G ++H N +P + + +
Sbjct: 413 ILPCCSPITEALIQG-----FLSHPWLHNPNILKTLSFAPVPPWMLTLASLILFFIGILR 467
Query: 195 T 195
T
Sbjct: 468 T 468
>gi|33601287|ref|NP_888847.1| putative competence protein [Bordetella bronchiseptica RB50]
gi|33575723|emb|CAE32800.1| putative competence protein [Bordetella bronchiseptica RB50]
Length = 824
Score = 43.6 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 60/240 (25%), Gaps = 24/240 (10%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P T + P P PG F + ++ +
Sbjct: 345 PSRLLTLAAVAVAVLDPWAPLAPG-----FWLSFGAVAVLV-------------GTGAGA 386
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + + + + L + + +AN LAIP++S V P
Sbjct: 387 RPRGMRARLRAALLGFGRTQMAVTLALTPLLAFLVRQVSLGSPLANALAIPVVSLAVTPL 446
Query: 130 GLIAILLMILSLDNIPFGVMAWG----LDIIIHIAHRI--SVAHNEFCIGRIPETSFVTI 183
L+ L L P + +++ I + + +
Sbjct: 447 ALLCGALSALPGGQGPAWLAGAAGHGLFALLMAPVGWIGRAEWSGLDVAAAPWPWLALAL 506
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ RH G + + + P L + G A+V +
Sbjct: 507 AGAAWALQAPGWPARHCGWLCMLPLLAWRPERPPPGYWTLTALDVGQGGAVVLETARHVL 566
>gi|317163746|gb|ADV07287.1| ComA [Neisseria gonorrhoeae TCDC-NG08107]
Length = 759
Score = 43.6 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 326 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 378
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 379 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 420
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 421 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 470
>gi|269302909|gb|ACZ33009.1| ComEC/Rec2 family protein [Chlamydophila pneumoniae LPCoLN]
Length = 487
Score = 43.6 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 20/181 (11%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
G S P P F + I F+ + + + I+
Sbjct: 305 AGFILCSIFFSPFSP-----TFVLSFLATLGILLFFPKIFSFLYTPWTQFLSPFWLYPIR 359
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ I + ++++F +P+ GL+ N+ I+ F ++P + I +
Sbjct: 360 Y---LAMTLAISLSAQLFIVLPIMQYFGSLPLEGLLYNL----IVPFTILPIIVFLIATI 412
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHN---EFCIGRIPETSFVTIVVEFLLMVFCK 194
IL + + G ++H N +P + + +
Sbjct: 413 ILPCCSPITEALIQG-----FLSHPWLHNPNILKTLSFAPVPPWMLTLASLILFFIGILR 467
Query: 195 T 195
T
Sbjct: 468 T 468
>gi|15617959|ref|NP_224243.1| hypothetical protein CPn0035 [Chlamydophila pneumoniae CWL029]
gi|33241374|ref|NP_876315.1| hypothetical protein CpB0039 [Chlamydophila pneumoniae TW-183]
gi|4376289|gb|AAD18188.1| CT339 hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|33235882|gb|AAP97972.1| competence locus E-like protein [Chlamydophila pneumoniae TW-183]
Length = 487
Score = 43.6 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 20/181 (11%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
G S P P F + I F+ + + + I+
Sbjct: 305 AGFILCSIFFSPFSP-----TFVLSFLATLGILLFFPKIFSFLYTPWTQFLSPFWLYPIR 359
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ I + ++++F +P+ GL+ N+ I+ F ++P + I +
Sbjct: 360 Y---LAMTLAISLSAQLFIVLPIMQYFGSLPLEGLLYNL----IVPFTILPIIVFLIATI 412
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHN---EFCIGRIPETSFVTIVVEFLLMVFCK 194
IL + + G ++H N +P + + +
Sbjct: 413 ILPCCSPITEALIQG-----FLSHPWLHNPNILKTLSFAPVPPWMLTLASLILFFIGILR 467
Query: 195 T 195
T
Sbjct: 468 T 468
>gi|329119612|ref|ZP_08248293.1| competence factor transporting permease/ATP-binding protein ComA
[Neisseria bacilliformis ATCC BAA-1200]
gi|327464209|gb|EGF10513.1| competence factor transporting permease/ATP-binding protein ComA
[Neisseria bacilliformis ATCC BAA-1200]
Length = 802
Score = 43.6 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 51/206 (24%), Gaps = 32/206 (15%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ P+ G + ++A + ++ + +
Sbjct: 378 ALAAVLFADPAAALSAGS-----WLSFGLVAA-LLWTDAWRVGGGTWYGTALRAQW---- 427
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ + + F +P +AN AIP S++++P L LL
Sbjct: 428 --------------AATLATVPAAGRLFSALPAASPLANAPAIPWFSWILVPLALAGSLL 473
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
L + L + A + + V L
Sbjct: 474 PFYPLQYAASWLGGQTLHALAWAARYAPEWGVAAAPLPLLLLACAACSVLML-------- 525
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPD 222
R G ++ F F P+
Sbjct: 526 PRGAGLRPWAALVLAGFVFYRPAPPE 551
>gi|325847864|ref|ZP_08170086.1| DNA internalization competence protein ComEC/Rec2-like protein
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480882|gb|EGC83935.1| DNA internalization competence protein ComEC/Rec2-like protein
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 726
Score = 43.3 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 47/150 (31%), Gaps = 25/150 (16%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQS 79
+ P G F +F + + + P ++ K+
Sbjct: 304 LILFFNPFAIFNSGFF-LSFLAGFA------IYVIYPSLVRG---------------KKY 341
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+ + + +I ++ + AN L IPI + + + I+L
Sbjct: 342 SYIKKSLIFTLTLQVTLAFHIIYYYGFFNLLSFFANFLVIPIFT-ISMYIIFGIIILYPF 400
Query: 140 --SLDNIPFGVMAWGLDIIIHIAHRISVAH 167
L I F ++ + + I++I ++
Sbjct: 401 LGGLLGIFFYILDFLIGSILNIVSFLNSFS 430
>gi|194097998|ref|YP_002001046.1| ComA [Neisseria gonorrhoeae NCCP11945]
gi|193933288|gb|ACF29112.1| ComA [Neisseria gonorrhoeae NCCP11945]
Length = 759
Score = 43.3 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 326 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 378
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 379 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 420
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 421 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 470
>gi|116513861|ref|YP_812767.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|116093176|gb|ABJ58329.1| Metallo-beta-lactamase superfamily hydrolase [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
Length = 728
Score = 43.3 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 56 PKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
P+++ + T+ + + +A + FL+ F+ + V + N
Sbjct: 306 PRLLLETGGILTYVLALGLVLTAKLPDCKQAFWLNGL---LTPFLLYFFYQVNVCTIFYN 362
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
IL +P +++V+P +A LL L ++ ++ ++A
Sbjct: 363 ILVVPYFNYIVMPMTGLA-LLAPPGLAAFFEKILEAAEGMLANVAK 407
>gi|296314700|ref|ZP_06864641.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria polysaccharea ATCC 43768]
gi|296838535|gb|EFH22473.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria polysaccharea ATCC 43768]
Length = 760
Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 47/157 (29%), Gaps = 25/157 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + S ++ +
Sbjct: 327 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACSG--RLHKGKQ 379
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N +AIP S+
Sbjct: 380 QTALCGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVAIPWFSW 421
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
V+ P L+ ++ L + + + L ++ +A
Sbjct: 422 VLTPLALLGSVVPFSPLQQLGAFLAEYTLRFLVWLAD 458
>gi|240127668|ref|ZP_04740329.1| ComA [Neisseria gonorrhoeae SK-93-1035]
Length = 739
Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 306 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 358
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 359 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 400
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 401 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 450
>gi|240115123|ref|ZP_04729185.1| ComA [Neisseria gonorrhoeae PID18]
gi|260441060|ref|ZP_05794876.1| ComA [Neisseria gonorrhoeae DGI2]
Length = 739
Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 306 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 358
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 359 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 400
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 401 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 450
>gi|118473913|ref|YP_888842.1| competence protein [Mycobacterium smegmatis str. MC2 155]
gi|118175200|gb|ABK76096.1| competence protein [Mycobacterium smegmatis str. MC2 155]
Length = 504
Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 17/216 (7%), Positives = 53/216 (24%), Gaps = 20/216 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + + P D F+ +AI + +
Sbjct: 301 RRRQAIPALAASVLVLMAAAPELAV-----DVGFALSVCATAAIVVIAPVWARRLEARGW 355
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++ + + V + AN+ + ++ +
Sbjct: 356 PS-------------TLAAAVSVAAAAQLVTAPLVAGISGRFSVVAVAANLAVVGVIPPI 402
Query: 126 VIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ A L + + + ++ +A S + +
Sbjct: 403 TVLGTAAAALAAVWPAGAGLLIRFTGPEVWWLLSVARWASGMPAATVPTPSGWAGVLLVA 462
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + + R + + G +++L
Sbjct: 463 ISGVTLTVLW-RSRWVRRAVAGAAVVMLAWTVAGQV 497
>gi|329767198|ref|ZP_08258725.1| hypothetical protein HMPREF0428_00422 [Gemella haemolysans M341]
gi|328836865|gb|EGF86512.1| hypothetical protein HMPREF0428_00422 [Gemella haemolysans M341]
Length = 641
Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 43/108 (39%), Gaps = 23/108 (21%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + + I + + +R I +
Sbjct: 322 GFQLSFFITFSLL---------------------MSESYIKTSRNKLHMSLR--ISIIST 358
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL 141
++ L+ +F+ I +++NI+ +PI S V+ P LI+ ++ ++S+
Sbjct: 359 LASVPILLYNFYTIVYISVLSNIVLVPIFSIVLFPLVLISYIIFLISI 406
>gi|240125214|ref|ZP_04738100.1| ComA [Neisseria gonorrhoeae SK-92-679]
Length = 739
Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 306 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 358
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 359 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 400
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 401 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 450
>gi|239998464|ref|ZP_04718388.1| ComA [Neisseria gonorrhoeae 35/02]
Length = 739
Score = 43.3 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 306 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 358
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 359 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 400
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 401 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 450
>gi|268603102|ref|ZP_06137269.1| ComA [Neisseria gonorrhoeae PID1]
gi|268681583|ref|ZP_06148445.1| ComA [Neisseria gonorrhoeae PID332]
gi|268587233|gb|EEZ51909.1| ComA [Neisseria gonorrhoeae PID1]
gi|268621867|gb|EEZ54267.1| ComA [Neisseria gonorrhoeae PID332]
Length = 691
Score = 43.3 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 49/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N + IP S+
Sbjct: 311 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVLIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 353 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 402
>gi|56421050|ref|YP_148368.1| late competence DNA binding and uptake protein [Geobacillus
kaustophilus HTA426]
gi|56380892|dbj|BAD76800.1| late competence protein (DNA uptake) [Geobacillus kaustophilus
HTA426]
Length = 749
Score = 43.3 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 84/274 (30%), Gaps = 28/274 (10%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPS--GPAFPGLFDFNFSSYYKGISAIGYFYSIPKM 58
M ++ P G+ L+ G P + + ++ + + P M
Sbjct: 269 MYAVLAGASPSVLRACATGMIVLAVQWKKGMIHPLD-----ALSWTALALLVF---DPYM 320
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIG------TYGSASASIFLIKHFHCIPVYGL 112
++ ++ S L R+ + +A L+ HF+ I V+ +
Sbjct: 321 VWDVGFQLSFLVTFALLAHVSVLASARSMLQNLFQTALAAQLAALPILLYHFYEIFVWSI 380
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFC 171
N+ +P SFV++P ++ + + + + +++ + S
Sbjct: 381 GLNVFFVPWYSFVILPIAFLSAVFSF----SPLIWLFSRLIELTDAVVRFFSVDYSFMLV 436
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS----E 227
+GR + R + + L P ++
Sbjct: 437 LGRPGPWCLAGYLTAIAAAFLDWERGRLLRGLTAVAAATALQLAAPYVDPKGEVTVLDVG 496
Query: 228 KGNLVALV---DKNTLISNYSNPPSFIFSQWKSA 258
+G+ + + K + + S P ++ W+
Sbjct: 497 QGDCIYIELPYRKAVYLIDTSGTPEWVREPWRKR 530
>gi|291280372|ref|YP_003497207.1| hypothetical protein DEFDS_2000 [Deferribacter desulfuricans SSM1]
gi|290755074|dbj|BAI81451.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 543
Score = 43.3 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 32/121 (26%), Gaps = 29/121 (23%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + K + G+ L P LFD +F + + I
Sbjct: 228 LFLDVKTSLLKLALFLCGLFILLSPET-----LFDISFILSFSAVFGIIL---------- 272
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ S + +A F++ F G+I L +P
Sbjct: 273 --------------VVSSLKRYQFIAVPIAATAFTMPFILYFFGNFNYLGVINTFLVLPF 318
Query: 122 L 122
+
Sbjct: 319 I 319
>gi|284799846|ref|ZP_05985010.2| DNA internalization-related competence protein ComEC/Rec2
[Neisseria subflava NJ9703]
gi|284796677|gb|EFC52024.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria subflava NJ9703]
Length = 743
Score = 43.3 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 49/162 (30%), Gaps = 29/162 (17%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ L P + ++A+ + S + S H +
Sbjct: 322 ALAVVLLLDPLAVLG-----VGTWLSFGLVAALIWASSG--RLKESGWHLAVRGQW---- 370
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ + + L F +P+ + N LAIP S+V+ P L+ +
Sbjct: 371 --------------AATILSVVLLGYLFASLPLLSPLVNALAIPWFSWVLTPLALLGSVF 416
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+ + + + L ++ +A EF + P
Sbjct: 417 SFELVQLVAAFLAEYTLRGLVWLA----TVSPEFAVAAAPVP 454
>gi|269794647|ref|YP_003314102.1| ComEC/Rec2-like protein [Sanguibacter keddieii DSM 10542]
gi|269096832|gb|ACZ21268.1| ComEC/Rec2-related protein [Sanguibacter keddieii DSM 10542]
Length = 888
Score = 43.3 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 7/130 (5%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRIS 164
+P Y + AN++A P L + G+ L + V W I +A R +
Sbjct: 443 VPTYSVPANLIATPALVPATV-LGVAGALAAPWWPQASSGLSQVAGWATWWIAEVAERFA 501
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI----GSIMIGITIIILFTFPYSFS 220
A + +L + + + + + + + P
Sbjct: 502 AAPLARIPWVEGAPGVALLAAVTVLAIVVVGRWGSLVWAVRTGVYVVGLGAAPSSPRRSL 561
Query: 221 PDLLISEKGN 230
D+L+ G
Sbjct: 562 WDVLLRRDGG 571
>gi|240112383|ref|ZP_04726873.1| ComA [Neisseria gonorrhoeae MS11]
Length = 739
Score = 43.3 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 306 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 358
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 359 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 400
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 401 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 450
>gi|34581022|ref|ZP_00142502.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262407|gb|EAA25911.1| unknown [Rickettsia sibirica 246]
Length = 82
Score = 43.3 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
+A+L P P +DF F +Y I A Y S P++I +E++ ++
Sbjct: 1 MLAKLYKPQNSILPEGYDFGFYAYLSDIGANDYAMSEPQIIERNETNFD---SFTYRVRS 57
Query: 79 SFLNEIRANIGTYGSA 94
N + I
Sbjct: 58 YIYNNLIEKIKGILQL 73
>gi|325125518|gb|ADY84848.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 752
Score = 43.3 bits (100), Expect = 0.068, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 56 PKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
P+++ + T+ + + +A + FL+ F+ + V + N
Sbjct: 330 PRLLLETGGILTYVLALGLVLTAKLPDCKQAFWLNGL---LTPFLLYFFYQVNVCTIFYN 386
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
IL +P +++V+P +A LL L ++ ++ ++A
Sbjct: 387 ILVVPYFNYIVMPMTGLA-LLAPPGLAAFFEKILEAAEGMLANVAK 431
>gi|89092892|ref|ZP_01165844.1| DNA internalization-related competence protein [Oceanospirillum sp.
MED92]
gi|89082917|gb|EAR62137.1| DNA internalization-related competence protein [Oceanospirillum sp.
MED92]
Length = 743
Score = 43.3 bits (100), Expect = 0.068, Method: Composition-based stats.
Identities = 30/216 (13%), Positives = 66/216 (30%), Gaps = 40/216 (18%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
I +ARL PP G P FD+ + +GI+A+GY I + + S
Sbjct: 135 IGQEISLVARLKPPHGQVNPKNFDYEKWLFARGINAVGYVRQITRAERNGGSVADIARHW 194
Query: 73 ISS--IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
I+ + Q +++ + + ++ ++ + G + ++ I L +
Sbjct: 195 INQTIVNQFKNQQVQGLYQAISTGNTNLLTSDNWETLKQTGTV-HLAVISGLHIGFMAG- 252
Query: 131 LIAILLMILSLDNIPFGVMAWGLD-IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF-- 187
M W + ++ +S I +
Sbjct: 253 ------------------MGWIIGMWVLRRLPSVSSMPYLLSI-SLAAGYLAISGFGLPA 293
Query: 188 ---------LLMVFCKT-----NIRHIGSIMIGITI 209
LL+ + R ++++ + I
Sbjct: 294 QRAFIMVTVLLLTSWRGHFIDHWTRWWIALVVVLLI 329
>gi|293569409|ref|ZP_06680706.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E1071]
gi|291587935|gb|EFF19786.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E1071]
Length = 722
Score = 43.3 bits (100), Expect = 0.068, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 279 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 337
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 338 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 373
>gi|229815191|ref|ZP_04445527.1| hypothetical protein COLINT_02237 [Collinsella intestinalis DSM
13280]
gi|229809201|gb|EEP44967.1| hypothetical protein COLINT_02237 [Collinsella intestinalis DSM
13280]
Length = 784
Score = 43.3 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 30/359 (8%), Positives = 101/359 (28%), Gaps = 36/359 (10%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+D F + I F + + ++ +I
Sbjct: 351 YDLGFRLSVASVLFIILFGPYVR-------------HHLCALHVPAPIADALSITLVAQW 397
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA-------ILLMILSLDNIPFG 147
+ + F + + +AN+L P +S +++ L +L + +
Sbjct: 398 ATLPLTLPVFGEVSLVSPLANLLVGPAMSGLLVTGLLGTGVATISDMLAQVTGVSGAAGA 457
Query: 148 VMAWGL---DIIIHIAHRISVAHNEFCIGRI---PETSFVTIVVEFLLMV------FCKT 195
+ + L D + I+ + + I L+V
Sbjct: 458 IAEFALTPADGLARISVFFAQVCAGIPFALVSVESSWVVAPIAYGAALLVYVRWKPVMPK 517
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALVDKNTLISNYSNPPSFIFS 253
+ +++ ++ + + P++++ + +G+ + + D + + + +
Sbjct: 518 RLVLALALIFACIVVHVSYWTRFAPPEVIVLDIGQGDAILIRDGPSTLLVDAGIGEATRT 577
Query: 254 QWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG 313
+ + + E +R + V
Sbjct: 578 ALARNHVFGLDGVVITHWDKDHWGGLPDVLEGVRVDRLYVADGAADHI-PAELSDGPAVS 636
Query: 314 VLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDND 372
L+ D +R+ + +++ + + + ++ +G L + + + ++
Sbjct: 637 ELREGDAVRVGSFVCELIWPDAGVRGDENADSA-VLDVSYEGARGGLRVLLTGDTERDE 694
>gi|51891611|ref|YP_074302.1| ComE-like competence protein [Symbiobacterium thermophilum IAM
14863]
gi|51855300|dbj|BAD39458.1| ComE-like competence protein [Symbiobacterium thermophilum IAM
14863]
Length = 829
Score = 43.3 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 43/153 (28%), Gaps = 14/153 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F I + K S
Sbjct: 334 LFDLGFQLSVAATLGILLLAGPIRGWLEPRLARALPGKPPS------WLSAGLAATLAAQ 387
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW-- 151
A + F G +AN+ IP + +V P GL +LL + ++
Sbjct: 388 ALVEPLSLHAFGLFSPVGPLANLAVIPYVGLLV-PFGLATVLLGLF--APPAVWLLGVAG 444
Query: 152 --GLDIIIHIAHRISVAHNEFC-IGRIPETSFV 181
L ++++ ++ +GR+P +
Sbjct: 445 RGALVGLVYMVKALASVPLAQVDVGRLPPGWAL 477
>gi|319638604|ref|ZP_07993366.1| DNA internalization-like competence protein ComEC/Rec2 [Neisseria
mucosa C102]
gi|317400353|gb|EFV81012.1| DNA internalization-like competence protein ComEC/Rec2 [Neisseria
mucosa C102]
Length = 741
Score = 43.3 bits (100), Expect = 0.072, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 25/144 (17%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ + L P + ++A+ + S W
Sbjct: 320 VLAVVLLLDPLAVLG-----VGTWLSFGLVAALIWVSSGRLKESGWRLAVRGQW------ 368
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ + + L F +P+ + N LAIP S+V+ P L+ +
Sbjct: 369 --------------AATVLSVVLLGYLFASLPLLSPLVNALAIPWFSWVLTPLALLGSVF 414
Query: 137 MILSLDNIPFGVMAWGLDIIIHIA 160
+ + + + L ++ +A
Sbjct: 415 PFEPVQLVAAFLAEYTLRGLVWLA 438
>gi|298529515|ref|ZP_07016918.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfonatronospira thiodismutans ASO3-1]
gi|298510951|gb|EFI34854.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfonatronospira thiodismutans ASO3-1]
Length = 819
Score = 43.3 bits (100), Expect = 0.072, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 38/119 (31%), Gaps = 13/119 (10%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
L P FD ++ I + + ++ + + +
Sbjct: 343 AAAAITLYNPWSV-----FDLRLQLSVMAVAGIALIIPLVERLFKNMEEKGVSRVFKYFL 397
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
A + + + F+ + L N++ +P+L F+V+PAG ++
Sbjct: 398 G-------LAGVTLAANVALLPIQAWTFNYFSPH-LYLNLIWLPVLGFLVLPAGFAGVI 448
>gi|261207709|ref|ZP_05922394.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289566285|ref|ZP_06446716.1| competence protein ComEC/Rec2 [Enterococcus faecium D344SRF]
gi|294615861|ref|ZP_06695703.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E1636]
gi|260078092|gb|EEW65798.1| conserved hypothetical protein [Enterococcus faecium TC 6]
gi|289161925|gb|EFD09794.1| competence protein ComEC/Rec2 [Enterococcus faecium D344SRF]
gi|291591247|gb|EFF22914.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E1636]
Length = 757
Score = 43.3 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 314 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 372
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 373 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 408
>gi|293552882|ref|ZP_06673540.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E1039]
gi|291603016|gb|EFF33210.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E1039]
Length = 722
Score = 43.3 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 279 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 337
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 338 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 373
>gi|293563909|ref|ZP_06678332.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E1162]
gi|294623508|ref|ZP_06702356.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium U0317]
gi|291597102|gb|EFF28305.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium U0317]
gi|291604142|gb|EFF33653.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E1162]
Length = 722
Score = 43.3 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 279 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 337
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 338 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 373
>gi|289669017|ref|ZP_06490092.1| competence protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 476
Score = 43.3 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 17/164 (10%), Positives = 48/164 (29%), Gaps = 30/164 (18%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + T +
Sbjct: 47 GFWLSFAGVAWLVWCLPSDDRA---------------------IMRGFLSAQTVATVGLL 85
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLD- 154
+ F + G AN++AIP +FVV+P L+ L + + + W +
Sbjct: 86 PLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLVGTALEAIYPGAGVWAWQLAGWCFEF 145
Query: 155 ---IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + + + + + + ++ ++ +
Sbjct: 146 TWPGFVWLGQTTAAL---WWVPESDGLALIAALLGAFWLLLPRG 186
>gi|257884750|ref|ZP_05664403.1| competence protein ComEC [Enterococcus faecium 1,231,501]
gi|257820588|gb|EEV47736.1| competence protein ComEC [Enterococcus faecium 1,231,501]
Length = 757
Score = 43.3 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 314 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 372
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 373 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 408
>gi|257878127|ref|ZP_05657780.1| competence protein ComEC [Enterococcus faecium 1,230,933]
gi|257892389|ref|ZP_05672042.1| competence protein ComEC [Enterococcus faecium 1,231,408]
gi|260559175|ref|ZP_05831361.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|257812355|gb|EEV41113.1| competence protein ComEC [Enterococcus faecium 1,230,933]
gi|257828768|gb|EEV55375.1| competence protein ComEC [Enterococcus faecium 1,231,408]
gi|260074932|gb|EEW63248.1| conserved hypothetical protein [Enterococcus faecium C68]
Length = 737
Score = 43.3 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 294 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 352
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 353 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 388
>gi|104773854|ref|YP_618834.1| competence protein ComEC [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103422935|emb|CAI97597.1| Competence protein ComEC [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 728
Score = 43.3 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 56 PKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
P+++ + T+ + + +A + FL+ F+ + V + N
Sbjct: 306 PRLLLETGGILTYVLALGLVLTAKLPDCKQAFWLNGL---LTPFLLYFFYQVNVCTIFYN 362
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
IL +P +++V+P +A LL L ++ ++ ++A
Sbjct: 363 ILVVPYFNYIVMPMTGLA-LLAPPGLAAFFEKILEAAEGMLANVAK 407
>gi|294617296|ref|ZP_06696937.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E1679]
gi|291596453|gb|EFF27705.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium E1679]
Length = 757
Score = 43.3 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 314 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 372
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 373 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 408
>gi|257887586|ref|ZP_05667239.1| competence protein ComEC [Enterococcus faecium 1,141,733]
gi|257823640|gb|EEV50572.1| competence protein ComEC [Enterococcus faecium 1,141,733]
Length = 757
Score = 43.3 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 80/231 (34%), Gaps = 13/231 (5%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 314 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWMKKTASHVLFTMITMPLIV 372
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ P+ G + +L P+ F+ +P+ L +P ++ + +I
Sbjct: 373 WHFYEWPLLGSLFTLLVAPVFKFLFLPSVFFLTLFN----RWLPRTLLLLIEEGLILFER 428
Query: 162 RISVAHNEFCI-GRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIIILFTFPYS 218
I + GR+P + L+ + + ++ + + + +++ F
Sbjct: 429 MIDSFSGSTLVIGRLPLVLSGVYIFGLLICMDRLNEQPMKLLFYVGLFSLMLLTLPFLRF 488
Query: 219 FSPDLLIS-EKGNLVALVDK---NTLISNYSNPPSFIFSQWKSALITPFHE 265
S I +G+ + L T++ + F +W + P E
Sbjct: 489 SSTIAFIDVGQGDSIFLQSPFRKETILIDTGGKLHFEREKWAQGIARPPAE 539
>gi|330952669|gb|EGH52929.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae Cit 7]
Length = 734
Score = 42.9 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 77/217 (35%), Gaps = 26/217 (11%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + S W+ S ++
Sbjct: 310 VLIFEPLVTLQPG-----FWLSFAAVGILILIF----------SGRLGAWRWWQSWTRAQ 354
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + + I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 355 WLIAVGLLPILLALNLP---------ISLSGPFANLLAVPWVSVIVLPPALLGTLLLPVP 405
Query: 141 -LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIR 198
+ + GL + ++ A + +P ++ ++ LL++ K +R
Sbjct: 406 VVGEGLLWLAGGGLQWLFVFLDAVAAALPAWLPSAVPIWAWWLSLLGALLLLLPKGMPVR 465
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+G ++ + + D+L + G +A++
Sbjct: 466 PLGWPLLLLCVFPPLESVPEGQVDVLQLDVGQGLAIL 502
Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 78/256 (30%), Gaps = 14/256 (5%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
P + +L P+G P FD+ + I A G + + +
Sbjct: 115 QPVSSGERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLAPARAAWRDA 174
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+++ ++ A + + S + ++L I ++
Sbjct: 175 IRQRLLAVDAQGREGGLAALVLGDGSGLSSTDWQVLQDTGTV----HLLVISGQHIGLLA 230
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIH-IAHRISVAHNEFCIGRIPETSFVTIVVEF 187
+ A++ L L + A S A + V+
Sbjct: 231 GVIYALVA---GLARWGLWP--RFLPWLPWACALAFSAALGYGLLAGFEVPVRRACVMVA 285
Query: 188 LLMVFCKTNIRHIGSIMIGIT---IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+++ + RH+G + + +++F + P +S + ++ + + +
Sbjct: 286 MVL-LWRLRFRHLGVVWPLLLSFNTVLIFEPLVTLQPGFWLSFAAVGILILIFSGRLGAW 344
Query: 245 SNPPSFIFSQWKSALI 260
S+ +QW A+
Sbjct: 345 RWWQSWTRAQWLIAVG 360
>gi|294953451|ref|XP_002787770.1| hypothetical protein Pmar_PMAR012548 [Perkinsus marinus ATCC 50983]
gi|239902794|gb|EER19566.1| hypothetical protein Pmar_PMAR012548 [Perkinsus marinus ATCC 50983]
Length = 476
Score = 42.9 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 14/143 (9%), Positives = 42/143 (29%), Gaps = 27/143 (18%)
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANI--LAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
G+ ++ + + ++ + ++ L I I+SF L + ++ +
Sbjct: 55 LSGARGVGNYVAHNPMRLKIFSFVGSLAVLTISIVSF-----------LNVFNVASPALY 103
Query: 148 VMAWGL---DIIIHIAHRISVAHNE-----FCIGRIP------ETSFVTIVVEFLLMVFC 193
VM + ++ +A + + I + L +
Sbjct: 104 VMNAYMMIFAFVLAVAESNASWPGVEKLQNVIYEQFGFLKNNLGRGIFLIFMGTLWISSW 163
Query: 194 KTNIRHIGSIMIGITIIILFTFP 216
+ +G + + I +
Sbjct: 164 TFWLGFVGLYLCCVGIGYIVIHF 186
>gi|92113709|ref|YP_573637.1| DNA internalization-related competence protein ComEC/Rec2
[Chromohalobacter salexigens DSM 3043]
gi|91796799|gb|ABE58938.1| DNA internalization-related competence protein ComEC/Rec2
[Chromohalobacter salexigens DSM 3043]
Length = 758
Score = 42.9 bits (99), Expect = 0.081, Method: Composition-based stats.
Identities = 23/246 (9%), Positives = 64/246 (26%), Gaps = 28/246 (11%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P+ A + P PGL + + + + + +
Sbjct: 313 PWQAWWLALLVVVTGDPLTVWQPGL-----WLSFLAVGVLIAAWQGRPVPRGARGWLLAL 367
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + + F + + N++A+P++ +++P
Sbjct: 368 VRSQCLLAPFMAAAVLVG----------------FERLSPAAPLINLVAVPLVGSLMVPL 411
Query: 130 GLIA-ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
GL L L +P+ ++ + + ++ +
Sbjct: 412 GLAGWALAWSPGLAMLPWRAFDALAQLVWQGLAWMGEIVPSWLPPGEEILPLALLLAAWG 471
Query: 189 LMVFCKTNIR----HIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALVDKNTLIS 242
R +I + + + +++ + +G LV L +
Sbjct: 472 GAWLMPGLARSVRVWASLSLIALALTWQPSTIPPGRVVVIVHDVGQGQLVELRSATQRML 531
Query: 243 NYSNPP 248
+ P
Sbjct: 532 FDTGPR 537
>gi|69247262|ref|ZP_00604280.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Enterococcus faecium DO]
gi|314949642|ref|ZP_07852963.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0082]
gi|68194935|gb|EAN09404.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Enterococcus faecium DO]
gi|313643981|gb|EFS08561.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0082]
Length = 757
Score = 42.9 bits (99), Expect = 0.081, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 314 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 372
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 373 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 408
>gi|257439379|ref|ZP_05615134.1| DNA internalization competence protein, ComEC/Rec2 family
[Faecalibacterium prausnitzii A2-165]
gi|257198254|gb|EEU96538.1| DNA internalization competence protein, ComEC/Rec2 family
[Faecalibacterium prausnitzii A2-165]
Length = 702
Score = 42.9 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 28/343 (8%), Positives = 89/343 (25%), Gaps = 27/343 (7%)
Query: 35 FDFNFSSYYKGISAIGY-------FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
D F + + + + + H + K ++ +
Sbjct: 333 CDVGFQLSFAAVVGTLAGGAIVRRSQEAWEKQRAKKKHPRLRFWKRKALGLAGSLWETVC 392
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
I S + L+ +Y L++ + ++ +++ A+L ++ +L
Sbjct: 393 ISACASMATFPVLVLRGMSTSLYALVSGAAVLWLVEPILLTGLGAALLGLVPAL-APAQR 451
Query: 148 VMAWGLDIIIHI----AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
V + + + + A +S + V +++ L + +R ++
Sbjct: 452 VCSCCAEALAEVLDRWALWVSGWPGAQIWFDTAYAATVCLLLAGLCWLAFHNRVRLRVAL 511
Query: 204 MIGITIIILFTFPY------SFSPDLLISEKGNLVALVDKNTLISNYSNPP--SFIFSQW 255
+ L F +L+ S V + + + +
Sbjct: 512 PALLLTAGLAVFTGNALNRDVVRVELVGSRNAPAVVISRNESAVILFRGGDVTRCAVETT 571
Query: 256 KSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQ-----PRKFLCIKKSFCVGCHRSDV 310
E + + + ++ + + R+ C V R+
Sbjct: 572 LERRNIRTVECLIDLRLRPRSAQRMGAEQRIAVDRMALYATRRVRCGPAEVEVLRTRNGC 631
Query: 311 IVGVLKRKDMIRLSCQLSDIL--ITTIRDINTKLCNVSLLITP 351
+ + + + + + + +
Sbjct: 632 VARIHAAGQTFVTLSGSAALAAPVQADTLLASPARPDCVKYDA 674
>gi|257881088|ref|ZP_05660741.1| competence protein ComEC [Enterococcus faecium 1,231,502]
gi|257816746|gb|EEV44074.1| competence protein ComEC [Enterococcus faecium 1,231,502]
Length = 745
Score = 42.9 bits (99), Expect = 0.083, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 302 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 360
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 361 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 396
>gi|314937546|ref|ZP_07844874.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0133a04]
gi|314941462|ref|ZP_07848351.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0133C]
gi|314951824|ref|ZP_07854862.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0133A]
gi|314992769|ref|ZP_07858173.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0133B]
gi|314996526|ref|ZP_07861564.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0133a01]
gi|313589312|gb|EFR68157.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0133a01]
gi|313592702|gb|EFR71547.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0133B]
gi|313595998|gb|EFR74843.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0133A]
gi|313599714|gb|EFR78557.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0133C]
gi|313643089|gb|EFS07669.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium TX0133a04]
Length = 757
Score = 42.9 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 314 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 372
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 373 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 408
>gi|237736490|ref|ZP_04566971.1| COME operon protein 3 [Fusobacterium mortiferum ATCC 9817]
gi|229421532|gb|EEO36579.1| COME operon protein 3 [Fusobacterium mortiferum ATCC 9817]
Length = 338
Score = 42.9 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 16/135 (11%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+ +F Y + I + KI K ++ + +
Sbjct: 173 SINSISFQLSYGAVFVI-------------AGIFPYIKTKIYKGKSKIIDGVLLTLSI-- 217
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ LI+ F I + + N++ +PI S + G I +LL SL + ++
Sbjct: 218 QFFLTPLLIQEFGVIQLLSFVTNMIVVPIGSLFI-SLGFIGLLLENFSLGFLITPILNIV 276
Query: 153 LDIIIHIAHRISVAH 167
+ + +
Sbjct: 277 FKLFFILVDFFNTIP 291
>gi|224827283|ref|ZP_03700376.1| DNA internalization-related competence protein ComEC/Rec2 [Lutiella
nitroferrum 2002]
gi|224600496|gb|EEG06686.1| DNA internalization-related competence protein ComEC/Rec2 [Lutiella
nitroferrum 2002]
Length = 762
Score = 42.9 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 79/241 (32%), Gaps = 30/241 (12%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+L + Y PF + L P PGL + ++A+ +
Sbjct: 309 LLVSRRAYTPFQVWWLALAVVLLIDPFAVLAPGL-----WLSFGLVAALMAATLARRRPP 363
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + L F +P+ +AN +AIP
Sbjct: 364 GK-------------------LRAALAGQWAALVMSLLPLALFFGSLPLVSPLANAVAIP 404
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+S ++ P L+A+ L +L ++ + + +A + + +P
Sbjct: 405 YISALLTPLALLAVALPFDALLHLTASLAEGFFYGVDRLA-----LLPSWSLPGLPWPLL 459
Query: 181 VTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
V L ++ + +R G++++ ++ P + + + + G ++++ +
Sbjct: 460 ALGAVGSLWLIAPRGVPLRGFGALLLAPALLYSPPRPAQGTLRVQVFDVGQGLSVLLQTA 519
Query: 240 L 240
Sbjct: 520 R 520
>gi|312865968|ref|ZP_07726189.1| DNA internalization competence protein ComEC/Rec2-like protein
[Streptococcus downei F0415]
gi|311098372|gb|EFQ56595.1| DNA internalization competence protein ComEC/Rec2-like protein
[Streptococcus downei F0415]
Length = 743
Score = 42.9 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 77/242 (31%), Gaps = 15/242 (6%)
Query: 38 NFSSYYKG-----ISAIGY--FYSIPKMIYSSESHNTWTWKKISSI---KQSFLNEIRAN 87
+F ++ + F P + ++ ++ + I ++ K +
Sbjct: 294 SFWENLGLRRLDNLALTIFSTFLIRPNFLLTTGGLLSFAYAFILAVIDFKGLSRFREVLS 353
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
G + A L F L+ + I ++++P +A LL L +
Sbjct: 354 QGLSLTLGAFPLLTYLFGVFQPLSLLLTLAFSLIFDYLLLPFLSLAFLLSPLLRLSWVNP 413
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+ L+ I+ ++ F + + I++ FL + IR + I+ +
Sbjct: 414 FFSL-LEQIVTWTQQLIGRPPVFGSPSLGLLISLLILLAFLHDYWKFKKIRRL-LILTFL 471
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ---WKSALITPFH 264
+ L P + ++ +G+ + L D F Q W+
Sbjct: 472 ILAGLVKHPLTNEVTMIDVGQGDSIFLRDSWGKTILIDTGGKVTFGQKEAWQKGHSDSNA 531
Query: 265 EA 266
+
Sbjct: 532 DK 533
>gi|291547002|emb|CBL20110.1| DNA internalization-related competence protein ComEC/Rec2
[Ruminococcus sp. SR1/5]
Length = 759
Score = 42.9 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 64/194 (32%), Gaps = 28/194 (14%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ YD A + + + P+ D F + + +G + +E
Sbjct: 269 RIYDMMSALSVTAMMILVESPAYLL-----DSGFLLSFGCVLGMGLAAEKICALAGAEK- 322
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
K ++ ++K F + + G I N+L +P + V
Sbjct: 323 -----KWTKALVSPIAL----------QLVTLPVMLKFFGEVSIAGFILNLLVLPSVG-V 366
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN----EFCIGRIPETSFV 181
V+ G+ A+LL ILS+ ++ +++ + IG PE +
Sbjct: 367 VLTGGMAALLLGILSI--PVAKLVLLPARVLLLFYEHLCSLAGRSGWSTWIGGEPEIWQI 424
Query: 182 TIVVEFLLMVFCKT 195
+ FL+ V
Sbjct: 425 LVYYGFLITVLFMG 438
>gi|59800726|ref|YP_207438.1| ComA [Neisseria gonorrhoeae FA 1090]
gi|59717621|gb|AAW89026.1| competence protein [Neisseria gonorrhoeae FA 1090]
Length = 691
Score = 42.9 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 258 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--CLYEGKR 310
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 311 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 352
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 353 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 402
>gi|317495074|ref|ZP_07953446.1| competence protein [Gemella moribillum M424]
gi|316914846|gb|EFV36320.1| competence protein [Gemella moribillum M424]
Length = 641
Score = 42.9 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 23/123 (18%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
I L F F+ +F + + + + + S
Sbjct: 306 TFILMLFINPLLIFDIGFELSFLITFCLLMSDDFLSGSKNIFTSG--------------- 350
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
I S ++ L+ +F+ +I+NI +PI S V+ P LI+ ++
Sbjct: 351 --------FKISLVSSLASLPILVMNFYTFSYISIISNIFLVPIFSLVIFPLVLISYVVF 402
Query: 138 ILS 140
+ S
Sbjct: 403 LFS 405
>gi|296140496|ref|YP_003647739.1| ComEC/Rec2-related protein [Tsukamurella paurometabola DSM 20162]
gi|296028630|gb|ADG79400.1| ComEC/Rec2-related protein [Tsukamurella paurometabola DSM 20162]
Length = 524
Score = 42.9 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 58/191 (30%), Gaps = 19/191 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ + PF A I L P P D F+ + + + + +
Sbjct: 313 LALRRGRQPFSALLAAIVILLLVRP-----PLALDIGFALSVAATAGLIVWAPVVRDRLV 367
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + + + + G +P+ L AN+LA P+
Sbjct: 368 VRRVPDTLAGLLAVTVVAQVVTLPLVLALSG-------------RVPLGALPANLLAGPV 414
Query: 122 LSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ + + + A+ + L + L ++H+A + G
Sbjct: 415 VPVITVVGTVAAMWSPVAPLLAEVGARATGPELWWVLHVARWCAELPVLVVPGGTVAGLL 474
Query: 181 VTIVVEFLLMV 191
+ + + +
Sbjct: 475 LVVGFGLVGAI 485
>gi|289665892|ref|ZP_06487473.1| competence protein [Xanthomonas campestris pv. vasculorum NCPPB702]
Length = 802
Score = 42.9 bits (99), Expect = 0.088, Method: Composition-based stats.
Identities = 17/164 (10%), Positives = 48/164 (29%), Gaps = 30/164 (18%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + G++ + + + + T +
Sbjct: 373 GFWLSFAGVAWLVWCLPSDDRA---------------------IMRGFLSAQTVATVGLL 411
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLD- 154
+ F + G AN++AIP +FVV+P L+ L + + + W +
Sbjct: 412 PLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLVGTALEAIYPGAGVWAWQLAGWCFEF 471
Query: 155 ---IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + + + + + + ++ ++ +
Sbjct: 472 TWPGFVWLGQTTAAL---WWVPESDGLALIAALLGAFWLLLPRG 512
>gi|268596319|ref|ZP_06130486.1| competence protein comA [Neisseria gonorrhoeae FA19]
gi|268550107|gb|EEZ45126.1| competence protein comA [Neisseria gonorrhoeae FA19]
Length = 704
Score = 42.9 bits (99), Expect = 0.090, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 49/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 271 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 323
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N + IP S+
Sbjct: 324 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVLIPWFSW 365
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 366 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 415
>gi|238020963|ref|ZP_04601389.1| hypothetical protein GCWU000324_00860 [Kingella oralis ATCC 51147]
gi|237867943|gb|EEP68949.1| hypothetical protein GCWU000324_00860 [Kingella oralis ATCC 51147]
Length = 781
Score = 42.9 bits (99), Expect = 0.090, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 5/109 (4%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
T + L P+ G F + + A+ + + K + ++
Sbjct: 333 TAMAVVLLWQPAAALSAG-----FGLSFGLVGALIWATAGRKTPRDVLDYIHNDDFRLPQ 387
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + A + + I F +PV+ +AN LAIP+ S+
Sbjct: 388 LTWRDKLRLAAQAQWAATLLGGVATIALFGLLPVFSPLANALAIPLFSW 436
>gi|255020533|ref|ZP_05292597.1| DNA internalization competence protein ComEC/Rec2
[Acidithiobacillus caldus ATCC 51756]
gi|254970053|gb|EET27551.1| DNA internalization competence protein ComEC/Rec2
[Acidithiobacillus caldus ATCC 51756]
Length = 702
Score = 42.9 bits (99), Expect = 0.091, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 65/238 (27%), Gaps = 8/238 (3%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI- 144
S + F + + +ANIL IP++ V +P L+ L + + +
Sbjct: 362 LQSQWTISVVLLPLIAALFGMVSLISPLANILVIPLVEVVAVPLTLLGALFALFDWEWLY 421
Query: 145 --PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHI 200
F ++A ++ + + H + + R +
Sbjct: 422 RVIFRLVAVEMEGVSALLHALLQIPWARVSTGQGRYWAIAAATLAFATFLLPPRWPHRWV 481
Query: 201 GSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALI 260
G + I +L P + L G+ +A+ + S + ++A
Sbjct: 482 GLLGF---IPLLVPSPAAEDLQLEEIPAGSGMAIFWQQGRQSGLYTANLWDKESQRAAAA 538
Query: 261 TPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRK 318
L + L + + + + V + R
Sbjct: 539 GIDARLQRAGIARLGLWVRGDLSSPSKKPPAARIFLPPGTRDASLADAVVDHCLPDRA 596
>gi|226939573|ref|YP_002794646.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Laribacter hongkongensis HLHK9]
gi|226714499|gb|ACO73637.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Laribacter hongkongensis HLHK9]
Length = 754
Score = 42.9 bits (99), Expect = 0.094, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 68/186 (36%), Gaps = 29/186 (15%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
F + ++A+ S W+ ++++ + L A++
Sbjct: 335 QAGFWLSFGLVAALLAV----------GSGRPGAWRGMAAVAGAQLAIAAASV------- 377
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
L+ F +P+ +AN+ A P+L + A L+ +L + + ++ L+
Sbjct: 378 --PLLLAWFGSLPLLSPLANLYAAPVLGGALTLASLLVLLQPFDAPLQLVAWLLGLALEP 435
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ +A ++ I + V ++ +LMV ++R + + + +
Sbjct: 436 LRWLAA-----GPQWQIPAPAGWAVVLALLGSVLMVLPSWSLRGL-----AACLWLPLLW 485
Query: 216 PYSFSP 221
P + P
Sbjct: 486 PVTERP 491
>gi|225021706|ref|ZP_03710898.1| hypothetical protein CORMATOL_01734 [Corynebacterium matruchotii
ATCC 33806]
gi|224945697|gb|EEG26906.1| hypothetical protein CORMATOL_01734 [Corynebacterium matruchotii
ATCC 33806]
Length = 556
Score = 42.9 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 21/189 (11%), Positives = 52/189 (27%), Gaps = 16/189 (8%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ I + +
Sbjct: 301 YGFALSVAATGGIIAAVPPLHALIGRTGLPDI-------------IVRALAVALAAHLVT 347
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWGLDI 155
+ + + V + AN+LA P ++ + I + AIL L+ L+ IP ++
Sbjct: 348 MPIVALMSNRVSVIAVAANLLAAPAVAPITILGLVAAILSLLPGGLETIPLAIIGPLAHW 407
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEF--LLMVFCKTNIRHIGSIMIGITIIILF 213
I +A + + + +++ + +G ++I + +
Sbjct: 408 IGLVATGGAALPGATIALPAALAPAWAALAAAWTIWLIYRQHFRILVGVVLILLFAPGIP 467
Query: 214 TFPYSFSPD 222
+ D
Sbjct: 468 MLTGARRID 476
>gi|145298545|ref|YP_001141386.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142851317|gb|ABO89638.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 739
Score = 42.9 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 65/209 (31%), Gaps = 29/209 (13%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+ F + ++ + + +
Sbjct: 319 ALYSAGFWLSFLAVALLLVASHLEGKPSLVRLQGLLLLGLLPLQLAL------------- 365
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMA 150
F I L+ N+LA+P+ +IP LI +LL LS L + F +
Sbjct: 366 -----------FEGIAPLALLINLLALPLFCVGIIPLALIGVLLAPLSHWLAHGLFWLAD 414
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
GL ++ ++S + P + V LL ++ + +
Sbjct: 415 TGLQWVLWALIQLSSQLQLWWPV--PSWAMPVSAVLILLWCAWHLPSARP-LLLPVVAAL 471
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+L +P + + L + + G ++++
Sbjct: 472 VLAVWPAATAWQLRVLDVGQGLSVLITKG 500
>gi|160880096|ref|YP_001559064.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium phytofermentans ISDg]
gi|160428762|gb|ABX42325.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium phytofermentans ISDg]
Length = 896
Score = 42.9 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 11/83 (13%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F Y + I Y PK+ S+S + KKI + +
Sbjct: 370 GFLLSYGAVLGIVLIY--PKLCNFSDSISNKIMKKIIE---------ASFLSISTQIMTL 418
Query: 98 IFLIKHFHCIPVYGLIANILAIP 120
L F+ IP+Y ++ N+L +P
Sbjct: 419 PLLAYFFYEIPLYSVLVNLLLVP 441
>gi|317050950|ref|YP_004112066.1| ComEC/Rec2-like protein [Desulfurispirillum indicum S5]
gi|316946034|gb|ADU65510.1| ComEC/Rec2-related protein [Desulfurispirillum indicum S5]
Length = 451
Score = 42.9 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 14/178 (7%), Positives = 49/178 (27%), Gaps = 18/178 (10%)
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ ++I ++ +S + + F + ++
Sbjct: 216 TFFLTASISLLIWPGSIMGASFQFSYLVTGSLILFAGLFRRWQYVWVCFLCFFASLPITA 275
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF + + + N+ A+P+ S ++ L +L + + L + +
Sbjct: 276 WHFGYVNLLSALVNLAAVPVFSALLYSFFLHLLLPA-----ALIIDPLHTALGWLNQVT- 329
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT----NIRHIGSIMIGITIIILFTF 215
+ + T ++ L + + + + + + +
Sbjct: 330 --------WVVPVRFSTISTLLIFGLLTAALWRKVHPYRPALLALLPVAVYFSLNASP 379
>gi|241759710|ref|ZP_04757810.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria flavescens SK114]
gi|241319718|gb|EER56114.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria flavescens SK114]
Length = 741
Score = 42.5 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 22/162 (13%), Positives = 45/162 (27%), Gaps = 29/162 (17%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ L P + ++A+ + S W
Sbjct: 320 ALAVVLLLDPLAVLG-----VGTWLSFGLVAALIWASSGRLKESGWRLAVRGQW------ 368
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ + + L F +P+ + N LAIP S+V+ P L+ +
Sbjct: 369 --------------AATVLSVVLLGYLFASLPLLSPLVNALAIPWFSWVLTPLALLGSVF 414
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
L + +A + + ++ EF + P
Sbjct: 415 -PFELVQLVAAFLA---EYTLRGLVWLATVSPEFAVAAAPVP 452
>gi|307297720|ref|ZP_07577526.1| ComEC/Rec2-related protein [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916980|gb|EFN47362.1| ComEC/Rec2-related protein [Thermotogales bacterium mesG1.Ag.4.2]
Length = 453
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 60/196 (30%), Gaps = 34/196 (17%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I + P I + PS A +F + +A+ F
Sbjct: 280 IDYRQHPLNILGLSGMIIVMVQPSIVAS-----ISFQLSFFATAALLIFLP--------- 325
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
I++ L +G A+ + F + + G+ L I ++
Sbjct: 326 -----------GIEKKSLIYQAFLVGAIAQAAIVPLSLTAFGTLSLVGI---PLTILMVP 371
Query: 124 FVVIP--AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN----EFCIGRIPE 177
V+P G+IAIL+ + ++ L + +I +++ + P
Sbjct: 372 MFVMPSYIGMIAILVSDFLGIEVVSSFISGSLRTMSNIMGKVTASIGEAIPAMRFEAFPA 431
Query: 178 TSFVTIVVEFLLMVFC 193
+V+ + F
Sbjct: 432 YFISLLVLFLSFIAFW 447
>gi|259503080|ref|ZP_05745982.1| ComE operon protein 3 [Lactobacillus antri DSM 16041]
gi|259168946|gb|EEW53441.1| ComE operon protein 3 [Lactobacillus antri DSM 16041]
Length = 752
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 80/239 (33%), Gaps = 13/239 (5%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSI-KQSFLNEIRANIGTYGSASASIFLIKH 103
IS I P ++++ ++ + + + R + S A +
Sbjct: 305 AISLIVGLLWNPYLLFTLGGQLSYLLSLLLQVMTEREGELKRCWLLGLLSLPAILNRTFE 364
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH + L+A+ + IP+ S V+ P +I+ L +P ++ L I I H +
Sbjct: 365 FHLLS---LVASYVMIPLFSVVIFPLVIISAASY--WLLPLPGELVNTFLCIFQRILHWL 419
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
+ E G+ P + + + L +V R+ ++ + F + ++
Sbjct: 420 AALPGEIHFGKPPGYFALLLFLATLWLVQRPRPARY--VVLFSLYACCFFQIHFPPFGEV 477
Query: 224 LISE--KGNLVALVDK---NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+ ++ +G+ + + L+ + F +W
Sbjct: 478 VFTDIGQGDSIIIRTPFNRQVLLIDTGGKVQFEQPRWAQVANHEDLAQKTSINYLKSCG 536
>gi|154496561|ref|ZP_02035257.1| hypothetical protein BACCAP_00853 [Bacteroides capillosus ATCC
29799]
gi|150274194|gb|EDN01285.1| hypothetical protein BACCAP_00853 [Bacteroides capillosus ATCC
29799]
Length = 768
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 23/188 (12%), Positives = 54/188 (28%), Gaps = 7/188 (3%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
+F GI I + + +++ + FL A
Sbjct: 336 QLSF-LSVAGILTITGWLNEKFFHRFPLKKGKTKPRRLYNSAVRFLVGCVTM-SIGAIAF 393
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ + +F + + +AN+L + ++ + + A L +L + +A +
Sbjct: 394 TTPLTVYYFGTVSLVSPLANLLTLWAVTVLFLLCLPAAALGGVLPVVGKVLAALAEPVSW 453
Query: 156 IIH-IAHRISVAHNEFCIGRIPE----TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
+ H I + +S V ++F K R I + +
Sbjct: 454 LFHRIVYGLSSLPFASVSLETGRYILFWLLFVYAVIGACVLFRKEKPRPIAPVCCCTITL 513
Query: 211 ILFTFPYS 218
+
Sbjct: 514 ASALLFNA 521
>gi|88855052|ref|ZP_01129717.1| putative integral membrane protein [marine actinobacterium
PHSC20C1]
gi|88815580|gb|EAR25437.1| putative integral membrane protein [marine actinobacterium
PHSC20C1]
Length = 787
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 26/270 (9%), Positives = 72/270 (26%), Gaps = 35/270 (12%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + P +F F+ + + F S +
Sbjct: 325 MAVLSIAAISLLVFDPWL-----SRNFAFALSVFATAGLLLFAEPLSKFLSQWMPRGLSL 379
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + + + YG++AN+LA P +
Sbjct: 380 VIAVPLAAQLACQPLLLLLQPSLPT--------------YGVVANVLAAPAAPVATVVGL 425
Query: 131 LIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNE---FCIGRIPETSFVTIVVE 186
++L ++ L + + + +A + + G I + I
Sbjct: 426 AACVVLPVVPALGTLLIWIAWLPSAWVAAVAMFFAGLPGARIPWLEGWIGVAALCVITAL 485
Query: 187 FLLMVFCKTNIR------------HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL 234
L+ + + R G++++G + ++P + +G+ V +
Sbjct: 486 LLMSLMMRHPWRRRAAVALVVITTLAGAVVVGSHVSAALSWPRDWQYAQCDVGQGDAVVV 545
Query: 235 VDKNTLISNYSNPPSFIFSQWKSALITPFH 264
+ + + + ++ L
Sbjct: 546 RSLDRVALVDTGAAPPLLTECLDRLGIDRI 575
>gi|225076262|ref|ZP_03719461.1| hypothetical protein NEIFLAOT_01300 [Neisseria flavescens
NRL30031/H210]
gi|224952386|gb|EEG33595.1| hypothetical protein NEIFLAOT_01300 [Neisseria flavescens
NRL30031/H210]
Length = 741
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 48/162 (29%), Gaps = 29/162 (17%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI 76
+ L P + ++A+ + S + S H +
Sbjct: 320 ALAVVLLLDPLAVLG-----VGTWLSFGLVAALIWASSG--RLKESGWHLAVRGQW---- 368
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ + + L F +P+ + N LAIP S+V+ P L+ +
Sbjct: 369 --------------AATVLSVVLLGYLFASLPLLSPLVNALAIPWFSWVLTPLALLGSVF 414
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
L + +A + + ++ EF + P
Sbjct: 415 -PFELVQLVAAFLA---EYTLRGLVWLATVSPEFAVAAAPVP 452
>gi|258616371|ref|ZP_05714141.1| DNA internalization-related competence protein ComEC/Rec2
[Enterococcus faecium DO]
Length = 456
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 13 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWLKKTASHVLFTMITMPLIV 71
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P L L
Sbjct: 72 WHFYEWPILGSLFTLLIAPVFKFLFLPGVLFLTLFN 107
>gi|255327138|ref|ZP_05368213.1| integral membrane protein [Rothia mucilaginosa ATCC 25296]
gi|255295756|gb|EET75098.1| integral membrane protein [Rothia mucilaginosa ATCC 25296]
Length = 669
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 58/200 (29%), Gaps = 25/200 (12%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
A T + L+ P D F+ SA+
Sbjct: 469 QSLAALQTTALMCLLAAPHLAV-----DMGFALSVTATSALILL--------------GP 509
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ S + ++ +P+Y + AN++A P+ + +
Sbjct: 510 PLIRLLMRVMPVFCAEMLAAPIVASLWCTPLILAMSGKVPLYSVPANLVAAPLAP-LSML 568
Query: 129 AGLIAILLMILSL---DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
AGL+A+ M+L L ++ I AH + A + V +
Sbjct: 569 AGLVALGFMLLGLPTAADLCLRAGGLAAQGIEWAAHTAAHAPGNPWEPGSSVPAVVCSAL 628
Query: 186 --EFLLMVFCKTNIRHIGSI 203
L + + R ++
Sbjct: 629 CVLALSIALWWVDARRYRAV 648
>gi|323496029|ref|ZP_08101092.1| ComEC/rec2 family protein [Vibrio sinaloensis DSM 21326]
gi|323318920|gb|EGA71868.1| ComEC/rec2 family protein [Vibrio sinaloensis DSM 21326]
Length = 746
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 50/194 (25%), Gaps = 46/194 (23%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P P L ++ I F S +
Sbjct: 324 PQAAIDPSL-----WLSMYAVAIIMLFLS-------------------FRLFDRSAVLKA 359
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNI 144
+ + F I GL+ N++ +P S +V+P +A+ S
Sbjct: 360 IGLQICIVGLMFPIIALVFGGISATGLLYNLVFVPWFSLIVVPITFLALASAPWSFVAER 419
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS-------------------FVTIVV 185
+ W L++++ + I + + + +++
Sbjct: 420 LWWCSDWSLNVVVKAVDF--SLYGWLPISQAQLSILVVMLVLLVISVWLDRKAILLAMII 477
Query: 186 EFLLMVFCKTNIRH 199
FL + + R
Sbjct: 478 AFLGLTDWQPRWRW 491
>gi|70729159|ref|YP_258895.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas fluorescens Pf-5]
gi|68343458|gb|AAY91064.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas fluorescens Pf-5]
Length = 743
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 63/176 (35%), Gaps = 21/176 (11%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
F + ++ + + S + + IG
Sbjct: 324 QAGFWLSFAAVAILILIF-------------AGRLGAWSWWQGWTRAQWLIAIGLLPPLL 370
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLD 154
A I + G +AN+LA+P +SF+V+P L+ LL+ + + + LD
Sbjct: 371 ALGLP------ISLSGPLANLLAVPWISFLVLPPALLGSLLLPVPYVGEGLLWLAGGLLD 424
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITI 209
+ + I+ + +IP + + LL++ + +R +G ++ + +
Sbjct: 425 GLFRLLGLIAGGWPAWVPPQIPLWLWGMNALGCLLLLLPRGVPMRVLGWPLLLLAV 480
>gi|167465255|ref|ZP_02330344.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus larvae subsp. larvae BRL-230010]
Length = 401
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 31/122 (25%), Gaps = 20/122 (16%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+ D A + I + P D F + + +
Sbjct: 258 RSDALHAVALVAWIMLVWEPEYLL-----DIGFQLSFLVTIGLIVLVPRVSTLLPIP--- 309
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ + A + I +F+ + +AN L +P+ S +
Sbjct: 310 ------------AVSLRNTIAMTFVAQAVSFPVTIYYFNQFSLLSWLANALLVPVFSMIS 357
Query: 127 IP 128
P
Sbjct: 358 FP 359
>gi|240080169|ref|ZP_04724712.1| ComA [Neisseria gonorrhoeae FA19]
gi|240117406|ref|ZP_04731468.1| ComA [Neisseria gonorrhoeae PID1]
gi|240122963|ref|ZP_04735919.1| ComA [Neisseria gonorrhoeae PID332]
Length = 739
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 49/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 306 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--RLYEGKR 358
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N + IP S+
Sbjct: 359 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVLIPWFSW 400
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 401 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 450
>gi|87118938|ref|ZP_01074836.1| DNA internalization-related competence protein [Marinomonas sp.
MED121]
gi|86165329|gb|EAQ66596.1| DNA internalization-related competence protein [Marinomonas sp.
MED121]
Length = 610
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 41/254 (16%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
K + L S GL+ +F I + + Y ++
Sbjct: 267 KISAYKVLLIALYGILLLDESALDSVGLW-LSF--TLVLILLVFFEYQTSHLLQ------ 317
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ + A+ ++ I ++ N+L +P+ +F+
Sbjct: 318 ------------------TMKLQFILTLCATTLILGWQASISSGSVLINLLVLPLTAFLW 359
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIII-----HIAHRISVAHNEFCIGRIPETSFV 181
P ++A + +L GLD ++ + + + + + V
Sbjct: 360 FPVAILASVESLLLHTVYLM----SGLDYVLVAALGWLEASVYLFPSLLLKSGLLLYFKV 415
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
+ + FLL V + +R I + +IILF D+L+ + ++V++ ++ +
Sbjct: 416 LLYLVFLLWVIYRHRVRSWVFFPILVLLIILFG-----PIDVLVKKDKSVVSVAHQSGSL 470
Query: 242 SNYSNPPSFIFSQW 255
+ + S W
Sbjct: 471 MLDNGVEPQLSSLW 484
>gi|298245298|ref|ZP_06969104.1| ComEC/Rec2-related protein [Ktedonobacter racemifer DSM 44963]
gi|297552779|gb|EFH86644.1| ComEC/Rec2-related protein [Ktedonobacter racemifer DSM 44963]
Length = 519
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 37/103 (35%), Gaps = 5/103 (4%)
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
T + + + + + FH + + +AN+L +P+L
Sbjct: 38 PALTRMLHPLQRLPGGGYLGELLAVTLAAQVATLPIVAVTFHVVSLVAPLANLLTVPLLG 97
Query: 124 FVVIPAGLIAI--LLMILSL---DNIPFGVMAWGLDIIIHIAH 161
+++ L+ +L L L + + ++ + +I AH
Sbjct: 98 TLLVLGALLCAIGVLSPLLLQLCGELAWPLVHYVAVVISWCAH 140
>gi|89890145|ref|ZP_01201656.1| competence protein [Flavobacteria bacterium BBFL7]
gi|89518418|gb|EAS21074.1| competence protein [Flavobacteria bacterium BBFL7]
Length = 674
Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 60/166 (36%), Gaps = 17/166 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+++ +K F + + L P LF F Y + AI I
Sbjct: 299 MNVNRKASIFHSLALSAFVLLLFNPKL-----LFHVGFQLSYTAVIAIVLIQPILYNF-- 351
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ WK I Q + + + +FH P L+ N+L +PI
Sbjct: 352 ----ISIRWKAIDYFWQ------IGTVTIAAQIGVAPLSLFYFHQFPGLFLLGNMLLLPI 401
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
L ++ + L+ ++L+I + ++ L+ I+ + +IS
Sbjct: 402 LPLIIGLSILLLVILLIRVPSDWLVELLNLSLNWIVKVVEKISSYD 447
>gi|295398768|ref|ZP_06808777.1| possible competence protein EC [Aerococcus viridans ATCC 11563]
gi|294972982|gb|EFG48800.1| possible competence protein EC [Aerococcus viridans ATCC 11563]
Length = 776
Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 49/162 (30%), Gaps = 24/162 (14%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+F +F Y I + + K S++ ++ T
Sbjct: 324 SIFTLSFQLTYALSYTILF------------TGKFIQAKCRHSLQVEIWQSFICSLVTIP 371
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + F LI N + + + P L+ +L+ I L + G
Sbjct: 372 FLTMTYF------EFSWVSLILNYGYSWLFATFLFPGLLLILLIQITGLGPYFTWL-QAG 424
Query: 153 LDIIIHIAHRISVAHN-----EFCIGRIPETSFVTIVVEFLL 189
L +I +++ ++ GR V VV L+
Sbjct: 425 LAYLIEGIEMLALFAGKWTWFQWVTGRPQIAVLVFFVVTLLM 466
>gi|114320593|ref|YP_742276.1| ComEC/Rec2-related protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226987|gb|ABI56786.1| ComEC/Rec2-related protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 750
Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 81/253 (32%), Gaps = 30/253 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ + P P PG F + ++ I + +
Sbjct: 312 LMLRRRPTVSHGLLVALTAVLILDPLAPLGPG-----FWLSFGAVAIIFLLAAHRR---- 362
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ W ++ ++ S + + F +P+ AN+LAIP+
Sbjct: 363 ADRSGWWVGLRLHAL---------------ISLALLPVIGWWFDELPLISAPANMLAIPV 407
Query: 122 LSFVVIPAGLIAILLMILSL---DNIPFGVMAWGLDIIIHIAHRISVAH--NEFCIGRIP 176
++F+V+P L+ + L+ L + + + L+ ++ ++ + R
Sbjct: 408 VAFLVVPPLLLGVPLLALLPPLSEALLVFSLGV-LEGLMQGLAWLAEYGQWGDPAGVRQG 466
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
+ LL + + + + + S ++ L++++
Sbjct: 467 LWVAAAGALLLLLPPGWFGRWLGLPLLALPVAAGPQPDAASAPSQLAVLDAGRGLISVLV 526
Query: 237 KNTLISNYSNPPS 249
+ Y +
Sbjct: 527 VADRVLVYGSGAR 539
>gi|227551297|ref|ZP_03981346.1| competence protein ComEC [Enterococcus faecium TX1330]
gi|257896082|ref|ZP_05675735.1| competence protein ComEC [Enterococcus faecium Com12]
gi|227179577|gb|EEI60549.1| competence protein ComEC [Enterococcus faecium TX1330]
gi|257832647|gb|EEV59068.1| competence protein ComEC [Enterococcus faecium Com12]
Length = 757
Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 81/231 (35%), Gaps = 13/231 (5%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 314 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWMKKTASHVLFTMITMPLIV 372
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ P+ G + +L P+ F+ +P+ L +P ++ + +I
Sbjct: 373 WHFYEWPLLGSLFTLLVAPVFKFLFLPSVFFLTLFN----RWLPRTLLLLIEEGLILFER 428
Query: 162 RISVAHNEFCI-GRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIIILFTFPYS 218
I + GR+P + L+ + + ++ + + + +++ F
Sbjct: 429 MIDSFSGSTLVIGRLPLVLSGVYIFGLLICMDRLNEQPMKLLFYVGLFSLMLLTLPFLRF 488
Query: 219 FSPDLLIS-EKGNLVALVD---KNTLISNYSNPPSFIFSQWKSALITPFHE 265
S I +G+ + L K T++ + F +W + P E
Sbjct: 489 SSTIAFIDVGQGDSIFLQSHFRKETILIDTGGKLPFEREKWAQGIARPPAE 539
>gi|300172814|ref|YP_003771979.1| ComE operon protein 3 [Leuconostoc gasicomitatum LMG 18811]
gi|299887192|emb|CBL91160.1| ComE operon protein 3 [Leuconostoc gasicomitatum LMG 18811]
Length = 762
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 45/140 (32%), Gaps = 10/140 (7%)
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+S +G P ++++ ++ + + S +
Sbjct: 314 SVWAVSLLGSLIYEPGILFTLGGQLSFAMTFCLLFTTKLNFWQVNLLLSAVSLPLIVSQQ 373
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHI 159
+H + + N AIPI S V++PA ++ + + +M + + H
Sbjct: 374 YTWHVLQTFV---NFAAIPIFSVVIVPAVIVGFIGQTVPF-----VTHLMNSIIGLFAHS 425
Query: 160 AHRISVAHNEFCIGRIPETS 179
I+ IG++
Sbjct: 426 VDFIATLPGNLIIGKLSWFV 445
>gi|87311729|ref|ZP_01093844.1| probable competence protein [Blastopirellula marina DSM 3645]
gi|87285513|gb|EAQ77432.1| probable competence protein [Blastopirellula marina DSM 3645]
Length = 810
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 21/223 (9%), Positives = 60/223 (26%), Gaps = 17/223 (7%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ P+ + P+ LF + ++ + + + +
Sbjct: 331 VERRVLPWNTLAAALLVVVSWNPA-----DLFRVGPQLSFLAVAVLIWLAPLLAWRIADP 385
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSAS----ASIFLIKHFHCIPVYGLIANILAI 119
+ ++ + A + FH I L+ + +
Sbjct: 386 LDRLIAESRPWQVRLLRGGIYSIGGAYLAGLAIWLVALPLIASRFHLISPAALLYSP-PL 444
Query: 120 PILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+++ + + AGL ++ S L + L + P
Sbjct: 445 MLVTSIALAAGLAVCVVSPFSSWLAYPAALLCDGSLHWLAVGVSSADALPGGSIWVAGPS 504
Query: 178 -----TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
++ + + + + G+I+ G + LF
Sbjct: 505 EWWTCGWYLLLACVAIAVRQWGWPLIRGGAILGGWCALGLFVA 547
>gi|293399574|ref|ZP_06643727.1| competence protein comA [Neisseria gonorrhoeae F62]
gi|291610143|gb|EFF39265.1| competence protein comA [Neisseria gonorrhoeae F62]
Length = 759
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 326 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--CLYEGKR 378
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 379 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 420
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 421 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 470
>gi|256850962|ref|ZP_05556351.1| competence protein ComEC [Lactobacillus jensenii 27-2-CHN]
gi|260661176|ref|ZP_05862090.1| competence protein ComEC [Lactobacillus jensenii 115-3-CHN]
gi|282934123|ref|ZP_06339401.1| ComEC/Rec2-like protein [Lactobacillus jensenii 208-1]
gi|256616024|gb|EEU21212.1| competence protein ComEC [Lactobacillus jensenii 27-2-CHN]
gi|260548113|gb|EEX24089.1| competence protein ComEC [Lactobacillus jensenii 115-3-CHN]
gi|281301737|gb|EFA94003.1| ComEC/Rec2-like protein [Lactobacillus jensenii 208-1]
Length = 750
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 75/193 (38%), Gaps = 11/193 (5%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK 102
G++AI + P++ + + ++ I ++ G + + L+
Sbjct: 314 LLGLTAIVHLLITPRLFMNIGAILSYVLVLGLKI---VKSDSIFKQGVLLNLILTPLLLF 370
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIPFGVMAWGLDIIIHIA 160
+F+ + V ++ NIL +P +FVV+P I I L L + + ++ G II + A
Sbjct: 371 NFYQVNVLTVVFNILIVPYFNFVVMPLTFINIFLFNNFLVVSKLFEKILEIGETIINNFA 430
Query: 161 HRISVAHNEFCIGRIPET---SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ G+I + I + +L+ K ++ +I ++I + +
Sbjct: 431 E--ANI-GMVTFGKISWWQCLFLLIISLGYLIFRLEKFKLKLPAITLIIAYLLIFISIHF 487
Query: 218 SFSPDLLISEKGN 230
+ + G
Sbjct: 488 PLQGQVTFIDVGQ 500
>gi|171678193|ref|XP_001904046.1| hypothetical protein [Podospora anserina S mat+]
gi|170937166|emb|CAP61823.1| unnamed protein product [Podospora anserina S mat+]
Length = 2390
Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 16/156 (10%), Positives = 41/156 (26%), Gaps = 24/156 (15%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK 102
+ + +IG +Y + + + S + Q+ + I + + + +
Sbjct: 2100 FAQVFSIGLWYWGSIVSTLDPTSTIFV--GTSKVPQAIVVGIPICLLMWAIGAMLYVGLP 2157
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
F+ + I + V+P + I++ L
Sbjct: 2158 DFYRQSPASIPG--FWISLWRRKVVPWFFVMIIIQNYWLSAP-----------------Y 2198
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEF---LLMVFCKT 195
F +P + + F L +
Sbjct: 2199 GRSWQFLFNTQHVPGWGIFLLALGFYVGLWALVLWG 2234
>gi|257898718|ref|ZP_05678371.1| competence protein ComEC [Enterococcus faecium Com15]
gi|257836630|gb|EEV61704.1| competence protein ComEC [Enterococcus faecium Com15]
Length = 745
Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 80/231 (34%), Gaps = 13/231 (5%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 302 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWMKKTASHVLFTMITMPLIV 360
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ P+ G + +L P+ F+ +P+ L +P ++ + +I
Sbjct: 361 WHFYEWPLLGSLFTLLVAPVFKFLFLPSVFFLTLFN----RWLPKTLLLLIEEGLILFER 416
Query: 162 RISVAHNE-FCIGRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIIILFTFPYS 218
I IGR+P + L+ + + ++ + + + +++ F
Sbjct: 417 MIDSFSGSPLVIGRLPLMLSGVYIFGLLICMDRLNEQPMKLLFYVGLFSLMLLTLPFLRF 476
Query: 219 FSPDLLIS-EKGNLVALVDK---NTLISNYSNPPSFIFSQWKSALITPFHE 265
S I +G+ + L T++ + F +W + P E
Sbjct: 477 SSTIAFIDVGQGDSIFLQSPFRKETILIDTGGKLYFEREKWAQGIARPPAE 527
>gi|191638324|ref|YP_001987490.1| membrane protein [Lactobacillus casei BL23]
gi|190712626|emb|CAQ66632.1| Integral membrane protein-like protein [Lactobacillus casei BL23]
gi|327382350|gb|AEA53826.1| ComEC [Lactobacillus casei LC2W]
gi|327385551|gb|AEA57025.1| ComEC [Lactobacillus casei BD-II]
Length = 734
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 22/201 (10%), Positives = 65/201 (32%), Gaps = 12/201 (5%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+ P+++ + T+ + + + + ++ + H +
Sbjct: 308 LFWQPRVLLTMGGQLTYLLTGLLVALPAMRSW---QLNWRLVLASMPVIAWHTFSFNILT 364
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
++ N L +PI V+P IA+LL GL ++ + +S +
Sbjct: 365 VLFNWLLMPIFELGVMPGLAIALLLP----HATLTATFDDGLQLLENGLVSLSRVPGQIV 420
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
G P ++ ++M+ + + +T+ + ++ + +G+
Sbjct: 421 TGAFPSW---LALIGVVVMLTVIVAKHWLAAACWFVTVFGWCWYQPNYRVVMFDVGQGDA 477
Query: 232 VALVDK--NTLISNYSNPPSF 250
+ + + + F
Sbjct: 478 ILIETPFHQGALLIDTGGRIF 498
>gi|325276012|ref|ZP_08141832.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas sp. TJI-51]
gi|324098854|gb|EGB96880.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas sp. TJI-51]
Length = 325
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 66/187 (35%), Gaps = 26/187 (13%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
+ P PG F + ++ + + + S W+ + ++
Sbjct: 1 MVEPLAALLPG-----FWLSFGAVATLVFCF----------SARLGAWRPWQAWTRAQWV 45
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV-IPAGLIAILLMILSL 141
+ + + + +AN++A+P +S V A L +LL +
Sbjct: 46 IAIGLLPVLLAVGLP---------VSLSAPLANLVAVPWVSLAVLPLALLGTLLLPLGGA 96
Query: 142 DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHI 200
+ LD++ + ++ + +P +++ + + LL++ + +R +
Sbjct: 97 GEALLWLAGGLLDVLFRVLALVAQQRPAWVPPALPLWAWLLVCLGALLVLLPRGVPLRGL 156
Query: 201 GSIMIGI 207
G +M+
Sbjct: 157 GGVMLLA 163
>gi|305680848|ref|ZP_07403655.1| ComEC/Rec2-like protein [Corynebacterium matruchotii ATCC 14266]
gi|305659053|gb|EFM48553.1| ComEC/Rec2-like protein [Corynebacterium matruchotii ATCC 14266]
Length = 556
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 61/225 (27%), Gaps = 22/225 (9%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
MLS T K + G+ + F+ I +
Sbjct: 271 MLSATTKAPSHTLALVVIGLILYDSSLAV------HYGFALSVAATGGIIAAVPSLHTLI 324
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + + + + V + AN+LA P
Sbjct: 325 GRTNLPDI-------------IVRALAVALAAHLVTMPIVALMSNRVSVIAVAANLLAAP 371
Query: 121 ILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
++ + I + AIL L+ L+ IP ++ I +A +
Sbjct: 372 AVAPITILGLVAAILSLLPGGLETIPLAIIGPLAHWIGLVATGGAALPGATIALPAALAP 431
Query: 180 FVTIVVEF--LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ + +++ + +G ++I + + + D
Sbjct: 432 AWAALAAAWTIWLIYRQHFRILVGVVLILLFAPGIPMLTGARRID 476
>gi|227486713|ref|ZP_03917029.1| competence protein EC [Anaerococcus lactolyticus ATCC 51172]
gi|227235301|gb|EEI85316.1| competence protein EC [Anaerococcus lactolyticus ATCC 51172]
Length = 729
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 9/102 (8%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTW-----TWKKISSIKQSFLNEIR---ANIGTYGSASAS 97
++AI + P I ++ ++ +K +K F T +
Sbjct: 299 VAAILILFINPFAILNTGYILSFMTMLAIYKIYPRLKVYFKEGFLRKNIAFTTSIQFAVL 358
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
F + +F ++AN + +P+ + + I L +
Sbjct: 359 PFSVYYFRYFNFLSIVANFIVVPVFE-IAMYLIFGLIFLYPI 399
>gi|240016028|ref|ZP_04722568.1| ComA [Neisseria gonorrhoeae FA6140]
Length = 739
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 306 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--CLYEGKR 358
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 359 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 400
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 401 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 450
>gi|240013589|ref|ZP_04720502.1| ComA [Neisseria gonorrhoeae DGI18]
Length = 739
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 29/174 (16%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + L P + ++A+ + + +Y +
Sbjct: 306 RGRLSAWATWWQALAAVLLFDPLAVLG-----VGTWLSFGLVAALIWACAG--CLYEGKR 358
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ S + + L F +P+ + N ++IP S+
Sbjct: 359 QTAVRGQW------------------AASVLSLVLLGYLFASLPLVSPLVNAVSIPWFSW 400
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P L+ ++ L + + L ++ +A EF + P
Sbjct: 401 VLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLA----DVSPEFAVAAAPLP 450
>gi|323464317|gb|ADX76470.1| DNA internalization-related competence protein ComEC/Rec2, putative
[Staphylococcus pseudintermedius ED99]
Length = 706
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 6/168 (3%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPF 146
+A + I GLI+N+ IP+ S ++IP I ++ I+ + ++
Sbjct: 304 SYIAVIAAIPLNYVQLNEIQWQGLISNLFFIPLYSIIIIPLSFILAIIAIVTPAFLSMFT 363
Query: 147 GVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
DI + R++V I E F+ + ++++ + R+I SI++
Sbjct: 364 HFTHVIFDIQAFLLKRLTVLERFTLPIPDFGEFGFLCCTIATFILLYLLSQRRYIISIVL 423
Query: 206 GITIIILFTFPYSF---SPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ IL + ++ +G+ + + ++
Sbjct: 424 VCCLCILLWQVHPRFTNQMTMIDVGQGDAILFQSQTGETLMIDTGGAY 471
>gi|307191573|gb|EFN75071.1| Probable dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1,
6-mannosyltransferase [Harpegnathos saltator]
Length = 1081
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 67/202 (33%), Gaps = 11/202 (5%)
Query: 34 LFDFNFSSYYKGISAIGY--FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
+F F+ ++ I+ Y Y + + + + + ++QS I A+
Sbjct: 109 IFGLQFTKWFVAITVTQYHLMYYLSRPLPNIMAMPLVLLALYGWLRQSHGIFIWASAAVI 168
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
+ ++ Y + L+IP + + +PAG++ + L ++ D+I + + W
Sbjct: 169 IIFRTELAILM--GLFLSYDIAYRKLSIPRMLKIAVPAGILFLALT-IATDSIFWRRLVW 225
Query: 152 G------LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+ I++ + + + L + +R + I
Sbjct: 226 PEGEVFYFNAILNKSSDWGTSPFLWYFYSALPRGLALSYFLIPLGMIWDARVRLLTVPAI 285
Query: 206 GITIIILFTFPYSFSPDLLISE 227
I+ F + +
Sbjct: 286 TFVILFSFLPHKELRFIIYVFP 307
>gi|183983715|ref|YP_001852006.1| membrane metal-binding protein ComEC [Mycobacterium marinum M]
gi|183177041|gb|ACC42151.1| conserved hypothetical membrane metal-binding protein ComEC
[Mycobacterium marinum M]
Length = 521
Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 21/215 (9%), Positives = 62/215 (28%), Gaps = 20/215 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+++ PA +T + ++ P D F+ +A + S+
Sbjct: 317 SRRRQAIPALSTTVLVLLVAAPHLAV-----DMGFALSVVATAA-----LVVVAPGWSDG 366
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W K+ + + T + + V ++AN+ +++
Sbjct: 367 LVARGWPKVLADG--------LAVATAAQVVTAPLVAAISGRFSVVAVVANLAVAAVIAP 418
Query: 125 VVIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+ + A+L++ + + ++H+A + + +
Sbjct: 419 ITVLGSAAAVLVIPWPAGAQLLIRFTGPQVWWVLHVARWAADVPGATVAVPAGLAGVLIV 478
Query: 184 VVEFLLMV-FCKTNIRHIGSIMIGITIIILFTFPY 217
+L+V + + I + +
Sbjct: 479 GGVTVLVVALWRFRWIRLAMISALLATLGSGLAWS 513
>gi|126664459|ref|ZP_01735443.1| M23 peptidase domain protein [Marinobacter sp. ELB17]
gi|126630785|gb|EBA01399.1| M23 peptidase domain protein [Marinobacter sp. ELB17]
Length = 325
Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 61/224 (27%), Gaps = 15/224 (6%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
+ L+ F P G +A L + V++ GL A+ M + V
Sbjct: 5 AMVTQILIPVLLLFWFARFPAAGFLAFGLQAISVGAVILGIGLAALWTMPPFWVPYVYAV 64
Query: 149 MAWGLDIIIHIAHRISV--AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIG 206
+ ++I H + N F T+ V IV F + + +G +
Sbjct: 65 ----VFLLITAWHLVRGRFLGNGFWQASAGPTTLVLIVAGFGSIGGYMGYLAWLGRELPP 120
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEA 266
+ + + + + G LV + L + + F W+
Sbjct: 121 VDTVNIALPFGAGDYLVAQGGSGRLVNIH----LHTLDESVERF--RPWR---GQSRALD 171
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
+ + R + + V V
Sbjct: 172 IVRITPFGRHVEGWQPADPARYVTFGTAVLAPCKGEVARIVDGV 215
>gi|295394825|ref|ZP_06805040.1| possible membrane metal-binding protein [Brevibacterium mcbrellneri
ATCC 49030]
gi|294972421|gb|EFG48281.1| possible membrane metal-binding protein [Brevibacterium mcbrellneri
ATCC 49030]
Length = 731
Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 15/145 (10%), Positives = 37/145 (25%), Gaps = 3/145 (2%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
I + + + ++AN + P+++ + L+ MI +
Sbjct: 349 ALAIPLTAQIGVFPVAVALGNPPSAWAVLANAVCAPVIAPATLAGMLVLCTQMIPFVSGA 408
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL---MVFCKTNIRHIG 201
A I +A T V LL V ++ +
Sbjct: 409 IAWFGAVCSWWIPAVAQFAVTLPGAHSAWPTGPTGIVLATCVSLLSAVAVILRSRVCAGL 468
Query: 202 SIMIGITIIILFTFPYSFSPDLLIS 226
+ + + + + +
Sbjct: 469 AALALLLGSCVPLIVAPRYTHWVAA 493
>gi|229586246|ref|YP_002844747.1| ComEC/Rec2 family protein [Rickettsia africae ESF-5]
gi|228021296|gb|ACP53004.1| ComEC/Rec2 family protein [Rickettsia africae ESF-5]
Length = 82
Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN-TWTWKKISSIK 77
+A+L P P +DF F +Y I A Y S P++I +E++ ++ ++ S I
Sbjct: 1 MLAKLYKPQNSILPEGYDFGFYAYLSDIGANDYAMSEPQIIERNETNFDSFIYRVCSYIY 60
Query: 78 QSFLNEIRANIGT 90
+ + +I+ +
Sbjct: 61 NNLIEKIKGILQL 73
>gi|73669276|ref|YP_305291.1| hypothetical protein Mbar_A1770 [Methanosarcina barkeri str.
Fusaro]
gi|72396438|gb|AAZ70711.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 525
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 58/173 (33%), Gaps = 11/173 (6%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA-- 96
F++ GI+A+G+F+S P+ I + + I S +
Sbjct: 316 FAASLLGITALGFFFSRPRKIMDRFKTRNLVLIALFGTVSFAAISLPMTILWDLSHAIFG 375
Query: 97 --SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI-PFGVMAWGL 153
S F+ I +Y LIA+++ + V+ ++ LL + P + +
Sbjct: 376 PFSFLFTGLFNEILLYMLIASLVVLIPKPGVISLFMMVRFLLGGFITGSFTPITFITLSI 435
Query: 154 DII-----IHIAHRISVAHNEFCIGRIPET-SFVTIVVEFLLMVFCKTNIRHI 200
+ I +++A ++ F ++ ++ R
Sbjct: 436 NAIILEFLLYVAGVTGKNPAPDNRLKMGIICGFSDVISGYVSFSVWMVLYRLF 488
>gi|262195133|ref|YP_003266342.1| DNA internalization-related competence protein ComEC/Rec2
[Haliangium ochraceum DSM 14365]
gi|262078480|gb|ACY14449.1| DNA internalization-related competence protein ComEC/Rec2
[Haliangium ochraceum DSM 14365]
Length = 880
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 48/146 (32%), Gaps = 4/146 (2%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
FD F + + + ++ + + + A
Sbjct: 374 FDPAFQLSFAATATLALALGRRSDSDPADEPGPEVEIRRNRHLSRLWRWLGGLWSASAWA 433
Query: 95 SASIFLIKH--FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMA 150
+A+ I F + GL+AN++A+P++ V+P G++ +LL + L + +
Sbjct: 434 AAATAPIAALAFGAVATGGLLANLVAVPLVELAVVPVGMLGLLLAAVNQPLGQLVLDLAV 493
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIP 176
++ +A +
Sbjct: 494 GASGWVVRVAELAAAHAPVVHTPPPS 519
>gi|269967623|ref|ZP_06181673.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827710|gb|EEZ81994.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 484
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 36/124 (29%), Gaps = 17/124 (13%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+ +F Y + A+ + ++ + +
Sbjct: 326 ASYSMSFWLSYLSVCAVLFAINLIRHQRGGWKAR---------------LKALLLTQLML 370
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMA 150
SA F + + N++ IP F+V+P +A+ + + + +
Sbjct: 371 SALIVPVSGHFFSGFSLSSIAYNLVFIPWFGFIVVPLMFLALFSSLFLEMIAKPLWHSVD 430
Query: 151 WGLD 154
W L
Sbjct: 431 WSLQ 434
>gi|229916359|ref|YP_002885005.1| DNA internalization-related competence protein ComEC/Rec2
[Exiguobacterium sp. AT1b]
gi|229467788|gb|ACQ69560.1| DNA internalization-related competence protein ComEC/Rec2
[Exiguobacterium sp. AT1b]
Length = 705
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 31/317 (9%), Positives = 90/317 (28%), Gaps = 35/317 (11%)
Query: 48 AIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCI 107
A G P ++ + T + + + + I L + +
Sbjct: 290 AAGMLAVQPFLLTNLGFQLTVGMTFFLLVTRQIWTGLIE-LSVIAQLFGLIVLWQVQPVL 348
Query: 108 PVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
V I N++ +S++++P +A + ++ F V ++ H + H
Sbjct: 349 SVAAPIWNLVMAICISWIIMP---LAFVTWMIPSIAPLFMV-------VLDAIHGMFTLH 398
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFC-------KTNIRHIGSIMIGITIIILFTFPYSF- 219
++ +P L + + G+ ++ +I ++
Sbjct: 399 DDLR-PWLPLHDLALPSQIALWLGLWGSLTLMNRKRWIGWGAAIMTCGLIAGWSEWSESS 457
Query: 220 --------SPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
D ++ E G + ++D + + + Q +S
Sbjct: 458 RVTFLDVGQGDAIVVESGRTIGVIDVGGVFQDPN-------EQKRSTFDPGEDVLAPYLW 510
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
+ + L + K V V ++++ + +D+
Sbjct: 511 KRGERSLDFVLLTHADHDHIGGLEGLLKVVTVEELWISKEVANAEKREELLHLAAANDVS 570
Query: 332 ITTIRDINTKLCNVSLL 348
+ + + + ++
Sbjct: 571 VHYLEADDWPTPWMWIV 587
>gi|149378071|ref|ZP_01895793.1| DNA internalization-related competence protein ComEC/Rec2
[Marinobacter algicola DG893]
gi|149357640|gb|EDM46140.1| DNA internalization-related competence protein ComEC/Rec2
[Marinobacter algicola DG893]
Length = 793
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 60/187 (32%), Gaps = 27/187 (14%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + ++ + +++ ++ + A
Sbjct: 354 DQGFWLSFGAVTVLVLLFAL-------------------RVRGTGWIVGLLLAQVAVFAG 394
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGL 153
L PV GL+AN+ AIP +S VV+P + +++ + + + GV+
Sbjct: 395 LWPILSSLGQPQPVLGLVANLFAIPWVSLVVMPLLALGAFVLVFLPAANALVIGVLDVVF 454
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
++ ++ +P S V F L+V + G ++ L+
Sbjct: 455 GVLWQGLSWLANVD------PVPTVSGSLQVAGFSLVVLMALLVPFSGFRKASACVVSLW 508
Query: 214 TFPYSFS 220
F
Sbjct: 509 IAVSVFR 515
>gi|315917219|ref|ZP_07913459.1| COME operon protein 3 [Fusobacterium gonidiaformans ATCC 25563]
gi|313691094|gb|EFS27929.1| COME operon protein 3 [Fusobacterium gonidiaformans ATCC 25563]
Length = 281
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 42/150 (28%), Gaps = 22/150 (14%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
I + P+ P +F Y I I Y + + K+ + +
Sbjct: 120 AWILLMLHPTEVLSP-----SFLLSYTAILTIFYVFPLLKLYFEDVPP---------YLS 165
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
F IG F + N+L +PI + +++ L
Sbjct: 166 YIFYTLSIQCIGI-------PLTAYFFGSLACLSFFVNLLILPIGTSLIL-FSFFTFFLE 217
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
I L + ++ + I I I
Sbjct: 218 IFHLGFLTVPILEFFYHIFYEILEWIGELP 247
>gi|300811340|ref|ZP_07091837.1| DNA internalization competence protein ComEC/Rec2-like protein
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497704|gb|EFK32729.1| DNA internalization competence protein ComEC/Rec2-like protein
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 728
Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 56 PKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
P+++ + T+ + + +A + FL+ F+ + V + N
Sbjct: 306 PRLLLETGGILTYVLALGLVLTAKLPDCKQAFWLNGL---LTPFLLYFFYQVNVCTIFYN 362
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
IL +P +++V+P +A LL SL ++ ++ ++A
Sbjct: 363 ILVVPYFNYIVMPMTGLA-LLAPPSLAAFFEKILEAAEGMLANVAK 407
>gi|326773588|ref|ZP_08232871.1| basic proline-rich protein [Actinomyces viscosus C505]
gi|326636818|gb|EGE37721.1| basic proline-rich protein [Actinomyces viscosus C505]
Length = 630
Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 47/181 (25%), Gaps = 20/181 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + L P D+ F+ + I S P + S
Sbjct: 392 RRAASVPALCAGAIVLLLIDPWQ-----SRDYGFALSVAATAGIVIG-SKPVAAHLSRRL 445
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W ++ A+ LI + + + AN+L+ P
Sbjct: 446 PRWLAAAVAL-------------PLVAQAACGPILILLQPSVGAWSVPANLLSEPAAVIA 492
Query: 126 VIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
I L A++ + ++ +A + T + +
Sbjct: 493 TISGLLAALIAPAWPAAATVIAWPALAACSWMVWVAGFFAHLPGAALPWPGGLTGALALG 552
Query: 185 V 185
Sbjct: 553 A 553
>gi|261337829|ref|ZP_05965713.1| putative ComEC/Rec2-related domain protein [Bifidobacterium
gallicum DSM 20093]
gi|270277293|gb|EFA23147.1| putative ComEC/Rec2-related domain protein [Bifidobacterium
gallicum DSM 20093]
Length = 621
Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 58/205 (28%), Gaps = 23/205 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ A + + ++ P+ + D F+ + I S
Sbjct: 388 RRAQTGHALSCTMIVMLMADPTAAS-----DLAFALSVGAVLGI--------------SW 428
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + A +P + +IAN++A P+L
Sbjct: 429 LAPVLQHWWRTWLPRMLADMLAVSVAAQLFALPIQTLMQPALPPWSIIANLVANPLLDVA 488
Query: 126 VI--PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
I L+ LM L ++ +WG I A + + +
Sbjct: 489 TICALGALMTSWLMP-QLGHMLAYAASWGTWPIALAAQWCGD-EHAQIDWMPGWQGALML 546
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGIT 208
+ F LM+ G I+ +
Sbjct: 547 ALVFALMLMWVILAARAGHIVTAMM 571
>gi|296454273|ref|YP_003661416.1| ComEC/Rec2-like protein [Bifidobacterium longum subsp. longum
JDM301]
gi|296183704|gb|ADH00586.1| ComEC/Rec2-related protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 446
Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 45/158 (28%), Gaps = 15/158 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F ++ ++ S + +
Sbjct: 255 YGFALSSAAVLGIVLFAGRLAGVFE------------RAMPHSIAEMMAMTV--AAQLFT 300
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 301 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCTPWLAGVFAWISSWGTLV 360
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ +A + + + T V IV + +
Sbjct: 361 MERVALWLGGSTMAVIPWKDGVTGAVLIVAAEIGIGML 398
>gi|319892645|ref|YP_004149520.1| Late competence protein ComEC, DNA transport [Staphylococcus
pseudintermedius HKU10-03]
gi|317162341|gb|ADV05884.1| Late competence protein ComEC, DNA transport [Staphylococcus
pseudintermedius HKU10-03]
Length = 742
Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 6/168 (3%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPF 146
+A + I GLI+N+ IP+ S ++IP I ++ I+ + ++
Sbjct: 340 SYIAVIAAIPLNYVQLNEIQWQGLISNLFFIPLYSIIIIPLSFILTIIAIVTPAFLSMFT 399
Query: 147 GVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
DI + R++V I E F+ + ++++ + R+I SI++
Sbjct: 400 HFTHVIFDIQAFLLKRLTVLERFTLPIPDFGEFGFLCCTIATFILLYLLSQRRYIISIVL 459
Query: 206 GITIIILFTFPYSF---SPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ IL + ++ +G+ + + ++
Sbjct: 460 VCCLCILLWQVHPRFTNQMTMIDVGQGDAILFQSQTGETLMIDTGGAY 507
>gi|118618947|ref|YP_907279.1| membrane metal-binding protein ComEC [Mycobacterium ulcerans Agy99]
gi|118571057|gb|ABL05808.1| conserved hypothetical membrane metal-binding protein ComEC
[Mycobacterium ulcerans Agy99]
Length = 517
Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 39/126 (30%), Gaps = 2/126 (1%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-I 144
+ T + + V ++AN+ +++ + + A+L++ +
Sbjct: 385 LAVATAAQVVTAPLVAAISGRFSVVAVVANLAVAAVIAPITVLGSAAAVLVIPWPAGAQL 444
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ ++H+A + V IV ++V R I M
Sbjct: 445 LIRFTGPQVWWVLHVARWAADVPGATVAVPAGLAG-VLIVGGVTVLVVALWRFRWIRLAM 503
Query: 205 IGITII 210
I +
Sbjct: 504 ISALLA 509
>gi|42526828|ref|NP_971926.1| ComEC/Rec2-related protein [Treponema denticola ATCC 35405]
gi|41817143|gb|AAS11837.1| ComEC/Rec2-related protein [Treponema denticola ATCC 35405]
Length = 524
Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 15/157 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F Y ++ I F + I L A+IG
Sbjct: 367 LGFMLSYGALAGILIF------------GSAVFDILNGKIPPKILGSFSASIG--AQTFT 412
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDI 155
+ +I + G+IA+I+ P++S +I + ++ I + D+
Sbjct: 413 APIVISKIGVLAPIGIIASIIVSPLISAFLILGLGAIFISLLFPFTGFIFSYFLNAFYDL 472
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I I ++ +F + L+
Sbjct: 473 IFFIIRTFALFPLMTADTFFAGLTFAILPFTAGLICV 509
>gi|269976847|ref|ZP_06183822.1| integral membrane protein [Mobiluncus mulieris 28-1]
gi|269935044|gb|EEZ91603.1| integral membrane protein [Mobiluncus mulieris 28-1]
Length = 737
Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 25/231 (10%), Positives = 57/231 (24%), Gaps = 47/231 (20%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ + A + L P A + F+ +I + +
Sbjct: 515 LALARPAKSIAALSLAVMAMLLVNPWQAAS-----WGFALSVVATFSIV------TLGQT 563
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA--- 118
+ ++ I ++ + ++ L AN+L
Sbjct: 564 LSRWLATFLPRFLALP--------LAISLSAQLGCQPLMLILRGKLQLFSLPANLLTGAV 615
Query: 119 ---------------------IPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDII 156
I + F A++ S L + V + I
Sbjct: 616 SSIVTVGGLVLVVLAAITHLGITLAQFATFLEPASALIFAPFSPLTEVTAQVTGLAANWI 675
Query: 157 IHIAHRISVAHNE---FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ +A S + + + + FL + +RH +
Sbjct: 676 LGVARFFSRLQGAEIPWIESGYGIFGILVVTLAFLWLAGRYAYLRHWSVSL 726
>gi|331006316|ref|ZP_08329630.1| DNA internalization-like competence protein [gamma proteobacterium
IMCC1989]
gi|330419863|gb|EGG94215.1| DNA internalization-like competence protein [gamma proteobacterium
IMCC1989]
Length = 857
Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 24/202 (11%), Positives = 59/202 (29%), Gaps = 39/202 (19%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+ P+ T + P G F + ++ + Y +
Sbjct: 365 RVSPWLLLTIALSGIAILDPLSIQSAG-----FWLSFLAVAVLLYGF------------- 406
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
++ ++ + + + + + + N+LAIP SF++
Sbjct: 407 -LAYRPMTVLLPYRHALQGIKAQWLLTLGLLLPSLFWLQGASISAPLINLLAIPWASFII 465
Query: 127 IPAGLI-----------AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA------HNE 169
+P I L LD V + +D + ++H I +
Sbjct: 466 VPCIFILLALLSLQALWLYCFQSLILDAAIIWVFSV-ID--LSVSHLIDGLLYGDQIAGD 522
Query: 170 FCIGRIPETSFVTIVVEFLLMV 191
F + + + +++ L +
Sbjct: 523 FWHPSMLQPALTALILGALGIT 544
>gi|304405798|ref|ZP_07387456.1| protein serine/threonine phosphatase [Paenibacillus curdlanolyticus
YK9]
gi|304345041|gb|EFM10877.1| protein serine/threonine phosphatase [Paenibacillus curdlanolyticus
YK9]
Length = 833
Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 26/213 (12%), Positives = 64/213 (30%), Gaps = 23/213 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + ++ + S + E + K + + +
Sbjct: 83 DVCFWAGIALVAGSFFALSPSPGPIAMELAVVFLLLKGLEAYERAELSYAPLLVFTSTLL 142
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW---G 152
+F + + Y L +++ ++ +L ++ + IP M G
Sbjct: 143 VQLFGAFIHNSLGWYDL-----------MMIVVEASLSFVLTLVFVQAIPVLTMTKKTSG 191
Query: 153 LD------IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIG 206
L ++I +A S+ G ++ + LL+ S+ +
Sbjct: 192 LRHEEIICLMILMA---SIMTGAVGWGVYGLSAEHVMSRYMLLLFALAGGAPLGASVGVV 248
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+I+ + L++ G L L+ +
Sbjct: 249 AGLILSLADFNAIVQMSLLAFAGMLAGLMREGG 281
>gi|254431897|ref|ZP_05045600.1| DNA internalization competence protein, ComEC/Rec2 family protein
[Cyanobium sp. PCC 7001]
gi|197626350|gb|EDY38909.1| DNA internalization competence protein, ComEC/Rec2 family protein
[Cyanobium sp. PCC 7001]
Length = 461
Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 34/285 (11%), Positives = 85/285 (29%), Gaps = 18/285 (6%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA--NIGTYGSASASIFLIKHFHC 106
+G+ S+ + + Q + A + S + HF
Sbjct: 83 VGFQLSVVATAALVVAAPPLEQALRQRLPQRCPAWLAASMAVPLAASLWTLPLQLFHFGV 142
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWGLDIIIHIAHRISV 165
+P+Y + AN+L P+L+ + + A +A+L +L +AW +++ I ++
Sbjct: 143 VPLYAVPANLLVAPLLTPLTLGAMGMALLAALLPGLIPVLLPPVAWLGGVVLGIVKAVAA 202
Query: 166 AHNEF---CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII---------LF 213
+ + + + + R + ++ + + L
Sbjct: 203 LPLAQWQLGRPTPLLVLLLALALGSIGLSGLPRWWRRLAPGLLMLATLGHLALLRGDQLV 262
Query: 214 TFPYSFSPDLLISEKGNLVALVD-KNTLISNYSN--PPSFIFSQWKSALITPFHEAPHVQ 270
LL +G + + L + + F +++ L+ A
Sbjct: 263 LVHQGQRDLLLARHQGRAALVSTQADGLSCSRARQLATGFGVARFDWVLVLDPLAAAEPA 322
Query: 271 KEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
Q + ++ +Q ++L V +
Sbjct: 323 CWQAQAGLVLASEDGSPPLQQGQWLGSPGLVAEALSADSRAVRLT 367
>gi|295695846|ref|YP_003589084.1| ComEC/Rec2-related protein [Bacillus tusciae DSM 2912]
gi|295411448|gb|ADG05940.1| ComEC/Rec2-related protein [Bacillus tusciae DSM 2912]
Length = 712
Score = 41.3 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 33/233 (14%), Positives = 62/233 (26%), Gaps = 37/233 (15%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ DP A L P FD F Y I +
Sbjct: 326 LGRRPDPLHAWGVTLAAESLLHPEWV-----FDLGFQLSYAATWGIFVLTPALRSAMGQR 380
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + F+ + L+AN+
Sbjct: 381 PRRVLEL---------------LAVAGAAEIATCPISFSRFYVWNGWTLLANL------- 418
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH-----IAHRISVAHNE----FCIGR 174
V AG + + + +LSL P V+ GL I I ++ + F +G
Sbjct: 419 -WVPMAGALLLGVGLLSLLTAPVPVLGDGLIWIADLLAQSIIGGVTAMDGDRRWLFRLGE 477
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
+P + L + R G + ++ + S +++
Sbjct: 478 LPLWIWALYGGGVLWALSRWGKGRRTGRFCTVVFCAVVVLSARAVSEQMVVFA 530
>gi|28493350|ref|NP_787511.1| comE operon protein 3-like protein [Tropheryma whipplei str. Twist]
gi|28572540|ref|NP_789320.1| DNA uptake protein [Tropheryma whipplei TW08/27]
gi|28410672|emb|CAD67058.1| putative DNA uptake protein [Tropheryma whipplei TW08/27]
gi|28476391|gb|AAO44480.1| comE operon protein 3-like protein [Tropheryma whipplei str. Twist]
Length = 472
Score = 41.3 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 57/172 (33%), Gaps = 15/172 (8%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
D+ F + I ++ S I+ + +
Sbjct: 309 CDYGFLLSVAATAGILLMSKSIEIRMQSMRFLRLNLGPIAPL---------IAVPLSAQL 359
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA-WGL 153
+ L+ IP+ G++AN ++ P++ I GL+A+L + + + F ++
Sbjct: 360 ACQPILVLITPQIPLTGVVANAISEPVVPIATI-LGLLAVLFSPIDMVSHLFLMLGYLPS 418
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+ I +A ++ P +++ L + R G+ +
Sbjct: 419 EWIARVARALAFIPPL----PFPGGVLGVMLLITLTLSIIFVVRRLTGTTVP 466
>gi|224437810|ref|ZP_03658757.1| hypothetical protein HcinC1_07550 [Helicobacter cinaedi CCUG 18818]
gi|313144257|ref|ZP_07806450.1| DNA transfer protein [Helicobacter cinaedi CCUG 18818]
gi|313129288|gb|EFR46905.1| DNA transfer protein [Helicobacter cinaedi CCUG 18818]
Length = 442
Score = 41.3 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 55/193 (28%), Gaps = 30/193 (15%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW----------KKISSIKQS 79
F G+ +F + ++ + P++I+S + KI +
Sbjct: 256 IFSGINLLSFRLLFVVVALCLALF--PRLIFSVGFGLSVGGVFFIYLFAKFSKIQKWRGV 313
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+ + + ++ H+ Y NIL+IP+ V+ + IL
Sbjct: 314 VGKFVLLPLWFNTLIFLDMLVLVHW--FFPYFTPLNILSIPLSLLFVV-FFPCMFVAHIL 370
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH 199
+ + W + + + + P FLL+ R
Sbjct: 371 GFGWLCDSFLQWAMSLRLDSIEFFT-----------PTWLLCI----FLLLCVLAMRFRI 415
Query: 200 IGSIMIGITIIIL 212
+ + +
Sbjct: 416 AHIALHCVGLGFF 428
>gi|257066676|ref|YP_003152932.1| DNA internalization-related competence protein ComEC/Rec2
[Anaerococcus prevotii DSM 20548]
gi|256798556|gb|ACV29211.1| DNA internalization-related competence protein ComEC/Rec2
[Anaerococcus prevotii DSM 20548]
Length = 722
Score = 40.9 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 76/256 (29%), Gaps = 48/256 (18%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A I L P GL F + A+ Y K +S
Sbjct: 291 IKALLIIGSGILLINPFA----GLN-AGFILTFAASFAVYLVYPKIKNHFS--------- 336
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF------ 124
K + + F+I ++ + ++AN L +P+ S
Sbjct: 337 ------KSYIGESLAFTSSI--QLALFPFMIYYYGSFNLVSILANFLILPVFSLSMYIIF 388
Query: 125 ---VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
P + L+ + L+ + ++ + + ++I +F I +
Sbjct: 389 IIIFAYPLLGSFLKLLFIGLNFLVESILN-----MTELLNKIKFLALDFRKPHI-----L 438
Query: 182 TIVVEFLLMVFC--KTNIR---HIGSIMIGITIIILFT--FPYSFSPDLLISEKGNLVAL 234
F+L++ R H I + I ++I S ++ +G+ L
Sbjct: 439 LAFYGFILIIIMLNLGRNRAKAHANIIPLSIMVLIFSLGKERGEISYQMIDIGQGDAFLL 498
Query: 235 VDKNTLISNYSNPPSF 250
DK + P +
Sbjct: 499 NDKGSYYMIDVGGPKY 514
>gi|256375341|ref|YP_003099001.1| DNA internalization-related competence protein ComEC/Rec2
[Actinosynnema mirum DSM 43827]
gi|255919644|gb|ACU35155.1| DNA internalization-related competence protein ComEC/Rec2
[Actinosynnema mirum DSM 43827]
Length = 770
Score = 40.9 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 14/166 (8%), Positives = 46/166 (27%), Gaps = 1/166 (0%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDN 143
+ + + + + + ++AN++ P+++ + A+L +
Sbjct: 369 ALAVPVAAHLATAPLVAGLSGEVSLVAVLANLVVAPVVAPATVLGVAAAVLAQVHDGAAR 428
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+ + + ++ +A S T + V ++ R +
Sbjct: 429 LAVRLAGPEVSWLVAVARWASGVPGASVRWPGGWTGGALLAVALVVGWALLRLKRVRALL 488
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ + + L P ++VA +
Sbjct: 489 VALVLGVGLVLVPLDVVAPRWPPPGWSVVACDVGQGDAVLLATAER 534
>gi|153953526|ref|YP_001394291.1| ComE [Clostridium kluyveri DSM 555]
gi|219854148|ref|YP_002471270.1| hypothetical protein CKR_0805 [Clostridium kluyveri NBRC 12016]
gi|146346407|gb|EDK32943.1| ComE [Clostridium kluyveri DSM 555]
gi|219567872|dbj|BAH05856.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 601
Score = 40.9 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 19/120 (15%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + I + N ++K+ + + I ++ +
Sbjct: 288 IGFGLSFLATLGIILY-------------NEKIYRKLFKLPSKIASNI--SLSLSSQIFS 332
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
++ + ++ N+ IP+ S +VI G A+ L + F V++W ++ I
Sbjct: 333 MPYIAFTIKNFSLGFIMGNLFLIPLFSAIVI-LGNSALCLYFI---KPVFKVISWTINFI 388
>gi|46581659|ref|YP_012467.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio vulgaris str. Hildenborough]
gi|46451082|gb|AAS97727.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio vulgaris str. Hildenborough]
Length = 974
Score = 40.9 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 52/175 (29%), Gaps = 6/175 (3%)
Query: 31 FPGLFDFNFSSYYKGI-SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
G F + G+ + G + + I + +T T + + + A
Sbjct: 465 HHGNFRPGTAPPLAGVTGSTGTLSTGTEGISDAGGPDTATLRDGVWQRVRRTLMLMALTT 524
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL----SLDNIP 145
+ + F + + N+L +P VV+P G + ++ L
Sbjct: 525 LAVQVALLPVQLIGFGRASPWFAL-NLLWLPFADLVVLPLGALGLVCEAADLTRPLAGPL 583
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
V A + ++ + + A + + L++ F R
Sbjct: 584 LMVAALPCEGLMWLLEWMEGAGLLAVPAMLRPHWTAALGYGALVVAFASLPGRLF 638
>gi|238855241|ref|ZP_04645560.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus jensenii 269-3]
gi|282932466|ref|ZP_06337891.1| ComEC/Rec2-like protein [Lactobacillus jensenii 208-1]
gi|238832133|gb|EEQ24451.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus jensenii 269-3]
gi|281303415|gb|EFA95592.1| ComEC/Rec2-like protein [Lactobacillus jensenii 208-1]
Length = 743
Score = 40.9 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 9/153 (5%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK 102
G++AI + P++ + + ++ + +E G + + L+
Sbjct: 307 LLGLTAIVHLLINPRLFMNIGAILSYILVLGLKV---IKSESSFKQGMLLNLLLTPLLLF 363
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM--ILSLDNIPFGVMAWGLDIIIHIA 160
+F+ + ++ + NIL +P +FVV+P I I L L + +I ++ +G I A
Sbjct: 364 NFYQVNIFTVFFNILIVPYFNFVVMPLTFINIFLFNKFLFISDIFEKILEFGEATINSFA 423
Query: 161 HRISVAHNEFCIGRIPET-SFVTIVVEFLLMVF 192
G+I ++V F ++F
Sbjct: 424 RTNIGM---IIFGKITWWQVLFLLIVSFCYLIF 453
>gi|157150217|ref|YP_001450879.1| DNA internalization-related competence protein celB [Streptococcus
gordonii str. Challis substr. CH1]
gi|157075011|gb|ABV09694.1| DNA internalization-related competence protein celB [Streptococcus
gordonii str. Challis substr. CH1]
Length = 746
Score = 40.9 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 13/130 (10%), Positives = 32/130 (24%), Gaps = 20/130 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F G+ + Y + I + + S S
Sbjct: 323 SFLLTTGGVLSCAYAFIITMLDFEDSS----------------GFRKAVLESLSISLGIL 366
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
LI +F + ++ L + ++P + L+ L +
Sbjct: 367 PLLIYYFAEFQPWSILLTFLFSIVFDTFMLPLLSLIFLISPLFAFTQVNVFFQ----WLE 422
Query: 158 HIAHRISVAH 167
+ ++
Sbjct: 423 MVIRWVASLS 432
>gi|149192126|ref|ZP_01870348.1| Rec2-related protein [Vibrio shilonii AK1]
gi|148834029|gb|EDL51044.1| Rec2-related protein [Vibrio shilonii AK1]
Length = 760
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 17/141 (12%), Positives = 36/141 (25%), Gaps = 25/141 (17%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+ + P A +F + +SA+
Sbjct: 317 RIMSMTTLLVAASLILTLIPFSAAST-----SFWLSFLAVSALMV--------------T 357
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
++ + + F + V N+L +P SF+V
Sbjct: 358 NSVVSYQFGVRTVLYTHALLCLLFIPIVVSL------FQGVAVASPFYNLLFVPWFSFLV 411
Query: 127 IPAGLIAILLMILSLDNIPFG 147
+P L+A + +L +
Sbjct: 412 VPLLLLATAVTVLLEEESFIW 432
>gi|289422295|ref|ZP_06424146.1| putative competence membrane protein [Peptostreptococcus anaerobius
653-L]
gi|289157300|gb|EFD05914.1| putative competence membrane protein [Peptostreptococcus anaerobius
653-L]
Length = 486
Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 44/125 (35%), Gaps = 26/125 (20%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ ++ D I I L P +++ +F + + ++ F
Sbjct: 293 FFVFRQVDLINILFIIASIMVLQNPYI-----IYNISFELSFLAMLSLAIF--------- 338
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
IKQ ++I A + S ++ F + G++ N++ +P+
Sbjct: 339 -----------TKYIKQYVYSDILAG-SISVAIFTSPLVLYKFETVSTMGVLGNLVILPM 386
Query: 122 LSFVV 126
++ ++
Sbjct: 387 MALII 391
>gi|270291421|ref|ZP_06197643.1| DNA internalization competence protein ComEC/Rec2 [Pediococcus
acidilactici 7_4]
gi|270280267|gb|EFA26103.1| DNA internalization competence protein ComEC/Rec2 [Pediococcus
acidilactici 7_4]
Length = 711
Score = 40.9 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 52/146 (35%), Gaps = 10/146 (6%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK 102
+ + I + P ++ ++ + + + + + +F +
Sbjct: 273 WCIVLLINLWL-NPFVLLQMGGQLSYLLSLVLISQSTTSSLKISFKLFLVEIPIILFSMY 331
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
H + ++ N+L +P+ S +VIPA LIA L + G++ + R
Sbjct: 332 KIHLLT---VLFNLLCVPLFSSLVIPAVLIAFC---FPLTASVINQVIIGVEWGL---QR 382
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFL 188
+ IG+ + +++ L
Sbjct: 383 LDQLPGLLLIGKPSRWLVMFLLMIAL 408
>gi|311235299|gb|ADP88153.1| ComEC/Rec2-related protein [Desulfovibrio vulgaris RCH1]
Length = 959
Score = 40.9 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 52/175 (29%), Gaps = 6/175 (3%)
Query: 31 FPGLFDFNFSSYYKGI-SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
G F + G+ + G + + I + +T T + + + A
Sbjct: 450 HHGNFRPGTAPPLAGVTGSTGTLSTGTEGISDAGGPDTATLRDGVWQRVRRTLMLMALTT 509
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL----SLDNIP 145
+ + F + + N+L +P VV+P G + ++ L
Sbjct: 510 LAVQVALLPVQLIGFGRASPWFAL-NLLWLPFADLVVLPLGALGLVCEAADLTRPLAGPL 568
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
V A + ++ + + A + + L++ F R
Sbjct: 569 LMVAALPCEGLMWLLEWMEGAGLLAVPAMLRPHWTAALGYGALVVAFASLPGRLF 623
>gi|121998039|ref|YP_001002826.1| ComEC/Rec2-like protein [Halorhodospira halophila SL1]
gi|121589444|gb|ABM62024.1| ComEC/Rec2-related protein [Halorhodospira halophila SL1]
Length = 710
Score = 40.9 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 26/242 (10%), Positives = 71/242 (29%), Gaps = 28/242 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + + P+ + P P G F + ++ I + M
Sbjct: 311 LLLRRPLSPWHSLAVAAAAVLALDPWAPLGAG-----FWLSFGAVAIILAATTGRPMQRG 365
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
I F +P+ +AN++A+P
Sbjct: 366 PLPWLR--------------------IQVLVGVGMLPATAVWFGHLPLLSPLANLVAVPW 405
Query: 122 LSFVVIPAGLIAILLMILSLDNIP--FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+S V+P L + L + + + L +++ + ++ + +
Sbjct: 406 VSVSVVPLILTGVALQPVVPEWSGGLWQGADAALGVLMRVLSALAEFLGAVEVPTPSVGA 465
Query: 180 FVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
V L++ + R + ++ + ++ + S +++ + G + + +
Sbjct: 466 VALAAVGVALVLAPRAVPGRWLAGPLLALLLLGPGSSGGGPSGRVVVFDTGGGLTALACD 525
Query: 239 TL 240
Sbjct: 526 GR 527
>gi|291297414|ref|YP_003508812.1| DNA internalization-related competence protein ComEC/Rec2
[Meiothermus ruber DSM 1279]
gi|290472373|gb|ADD29792.1| DNA internalization-related competence protein ComEC/Rec2
[Meiothermus ruber DSM 1279]
Length = 679
Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 83/289 (28%), Gaps = 22/289 (7%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
L PS PG FD G++A+ + + W +K S
Sbjct: 103 LLRPSNKRNPGGFDQQTWLRGLGVTAVLRARQVVHYEPLPAGPHQW-LQKQLVAGLSAPV 161
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
T G + F +A+ LA+ L ++ G +LL L
Sbjct: 162 AALVTALTLGERRELGEAYEAFQQAG----LAHTLALSGLHVAIL-TGFFVLLLYPLGRW 216
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
P A + + + + P I+ F+LM R +
Sbjct: 217 RYP--------------AALLLLLLYLWLVEPQPSLVRAVIMAGFVLMGLFMGRGRV--A 260
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
++ +++ + L +S + + +A++ ++ + + W S +T
Sbjct: 261 VLPALSLALFVQLLLEPRTLLSLSAQLSYLAVLGMALVLPHLPRLEGWKQWVWSSVSVTL 320
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVI 311
+ + + + + + + ++
Sbjct: 321 AAQILILPLLLHHFHQLPLISPVANLLVLPLLSLLVPLGFLKLLMGGLL 369
>gi|253583450|ref|ZP_04860648.1| COME operon protein 3 [Fusobacterium varium ATCC 27725]
gi|251834022|gb|EES62585.1| COME operon protein 3 [Fusobacterium varium ATCC 27725]
Length = 451
Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 47/135 (34%), Gaps = 16/135 (11%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+ + +F Y + AI Y I + + + K + ++ + T
Sbjct: 284 SMNEVSFILSYLAVFAIICIYPIIRKV-------------LYKGKSRIIEKLI--LLTTI 328
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
LIK F I +N++ +PI + ++ I +LL + L I F +
Sbjct: 329 QFFLLPILIKEFGTIQFLSFFSNLIILPIGTLYIV-ISFIGLLLENIGLGFIIFPMTNII 387
Query: 153 LDIIIHIAHRISVAH 167
+ + + S
Sbjct: 388 FETFMKLVAIFSKVP 402
>gi|329903716|ref|ZP_08273592.1| Putative DNA internalization-competence-like protein ComEC/Rec2
[Oxalobacteraceae bacterium IMCC9480]
gi|327548237|gb|EGF32936.1| Putative DNA internalization-competence-like protein ComEC/Rec2
[Oxalobacteraceae bacterium IMCC9480]
Length = 323
Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Query: 161 HRISVAHNEFCIGRIP-ETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYS 218
+S IP +F + L + + +R G + L T P +
Sbjct: 2 AWLSGLSWAVWSAPIPSWWAFAAAAIGTLWWLAPRGWPVRWAGLAGWLPLLATLPTHPAA 61
Query: 219 FSPDLLISEKGNLVALVDK 237
D++ + G +AL+ +
Sbjct: 62 GQFDVIAFDVGQGMALLVE 80
>gi|88798814|ref|ZP_01114397.1| DNA uptake protein [Reinekea sp. MED297]
gi|88778577|gb|EAR09769.1| DNA uptake protein [Reinekea sp. MED297]
Length = 732
Score = 40.9 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 32/264 (12%), Positives = 85/264 (32%), Gaps = 33/264 (12%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+ P I L P+ G + ++ I
Sbjct: 301 RTGPLTLLGWTAVILMLWHPAAWLAIGP-----WLSFGSVAVIFLILRWR---------- 345
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ + + Q L ++ I A +S F + + ++++ ++ FV
Sbjct: 346 --LLQNLPRLWQPILFQVLMTISILPWALSSGFS------FNLLSVFSSLVLSGLIGFVG 397
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+P L+ ++ + L + + W + ++ A+ + + + +VV
Sbjct: 398 LPMALMMPIVDLTWLHSSWNQAVEWLVSLLTLTAN------PGLELPYLDSAALFLLVVM 451
Query: 187 FLLMVFCK--TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISN 243
+ + T+ +G+ ++ ++I+ + P + + + G+ AL+
Sbjct: 452 AVW-AIWRRDTSSILVGAALLCLSILFWGQGGTNRVPSVTVYDVGHGQALLLDTGDDRFL 510
Query: 244 YSNPPSFIFSQWKSALITPFHEAP 267
Y F Q + ++ P
Sbjct: 511 YDTGGRFSPEQSLAEVVLHRVLPP 534
>gi|254556951|ref|YP_003063368.1| ComE operon protein 3 [Lactobacillus plantarum JDM1]
gi|254045878|gb|ACT62671.1| ComE operon protein 3 [Lactobacillus plantarum JDM1]
Length = 763
Score = 40.9 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 33/275 (12%), Positives = 84/275 (30%), Gaps = 14/275 (5%)
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
P ++ ++ + + A S + +H ++ L
Sbjct: 323 NPLVLSQLGGQLSYGLALLLILMPGLPPWRLAIWIQVISLPVLLVATAQWH---LWSLAV 379
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNI-PFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N++ PI S+V++P ++ + + V W L + +S IG
Sbjct: 380 NLVVAPIFSWVLLPVTVVGA---SIGFGSTNVTSVCEWVLVNFQNWLEWVSHWPGLLIIG 436
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIR--HIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
+ ++ + L + +T R + G ++ + FP + + +G+
Sbjct: 437 Q--PSTLWAWTLSLLSLWLLRTPRRRYYWGLLLAYACFSLSLRFPLHGAVQFIDVGQGDS 494
Query: 232 VALVDKNTLISNYSNPPS---FIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRS 288
+ + + + F +W++ + P A + L + L + S
Sbjct: 495 ILIRQPFNRQVSLIDTGGQLHFSRPRWQAEQVQPRSRAETITVNYLHRLGITHLDTVYLS 554
Query: 289 MQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
+ + + V+V +
Sbjct: 555 HKDVDHIGDLGELLRLMPVNQVVVPAGMARLAKFQ 589
>gi|300768266|ref|ZP_07078171.1| ComE operon protein 3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300494330|gb|EFK29493.1| ComE operon protein 3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 763
Score = 40.6 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 33/275 (12%), Positives = 84/275 (30%), Gaps = 14/275 (5%)
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
P ++ ++ + + A S + +H ++ L
Sbjct: 323 NPLVLSQLGGQLSYGLALLLILMPGLPPWRLAIWIQVISLPVLLVATAQWH---LWSLAV 379
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNI-PFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N++ PI S+V++P ++ + + V W L + +S IG
Sbjct: 380 NLVVAPIFSWVLLPVTVVGA---SIGFGSTNVTSVCEWVLVNFQNWLEWVSHWPGLLIIG 436
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIR--HIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
+ ++ + L + +T R + G ++ + FP + + +G+
Sbjct: 437 Q--PSTLWAWTLSLLSLWLLRTPRRRYYWGLLLAYACFSLSLRFPLHGAVQFIDVGQGDS 494
Query: 232 VALVDKNTLISNYSNPPS---FIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRS 288
+ + + + F +W++ + P A + L + L + S
Sbjct: 495 ILIRQPFNRQVSLIDTGGQLHFSRPRWQAEQVQPRSRAETITVNYLHRLGITHLDTVYLS 554
Query: 289 MQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
+ + + V+V +
Sbjct: 555 HKDVDHIGDLGELLRLMPVNQVVVPAGMARLAKFQ 589
>gi|325473883|gb|EGC77071.1| ComEC/Rec2-like protein [Treponema denticola F0402]
Length = 502
Score = 40.6 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 15/157 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F Y ++ I F + I L A+IG
Sbjct: 345 LGFMLSYGALAGILIF------------GSAVHDILTGKIPPKILGSFSASIG--AQTFT 390
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDI 155
+ +I + G+IA+++ P++S +I + ++ I + D+
Sbjct: 391 APIVISKIGVLAPIGIIASVIVSPLISAFLILGLAAIFISLLFPFTGFIFSYFLNAFYDL 450
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I I ++ +F + LM
Sbjct: 451 IFFIIRIFALFPPMTADSFFDNLTFAILPFTAGLMCM 487
>gi|99034793|ref|ZP_01314713.1| hypothetical protein Wendoof_01000459 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 93
Score = 40.6 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 12/99 (12%)
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPE 352
+ C C+ ++ +V + +K+ I +C D+ I + + +I
Sbjct: 4 RLKCND-YGCIYNKGNNKLVLLAYKKEDISENCDKVDLTIQLSEFDYSAC--NAKIIKHA 60
Query: 353 ILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
L+ G+ + + + V+ + PW
Sbjct: 61 DLETYGTHSVWLTNRYVKINTVRS---------NGPWHM 90
>gi|283458047|ref|YP_003362658.1| putative membrane metal-binding protein [Rothia mucilaginosa DY-18]
gi|283134073|dbj|BAI64838.1| predicted membrane metal-binding protein [Rothia mucilaginosa
DY-18]
Length = 668
Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 30/200 (15%), Positives = 58/200 (29%), Gaps = 25/200 (12%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
A T + L+ P D F+ SA+
Sbjct: 469 QSLAALQTTVLMCLLAAPHLAV-----DMGFALSVTATSALILL--------------GP 509
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ S + ++ +P+Y + AN++A P+ + +
Sbjct: 510 PLIRLLMRVMPVFCAEMLAAPIVASLWCTPLILAMSGKVPLYSVPANLIAAPLAP-LSML 568
Query: 129 AGLIAILLMILSL---DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV--TI 183
AGL A+ M+L L ++ I AH + A + V +
Sbjct: 569 AGLAALGFMLLGLPTAADLCLRAGGLAAQGIEWAAHTAAHAPGNPWEPGSSVPAVVGSAL 628
Query: 184 VVEFLLMVFCKTNIRHIGSI 203
V L + + R ++
Sbjct: 629 CVLALSVALWWVDARRYRAV 648
>gi|255282433|ref|ZP_05346988.1| DNA internalization-related competence protein ComEC/Rec2
[Bryantella formatexigens DSM 14469]
gi|255267017|gb|EET60222.1| DNA internalization-related competence protein ComEC/Rec2
[Bryantella formatexigens DSM 14469]
Length = 728
Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 28/106 (26%), Gaps = 24/106 (22%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L F + + I + K L +
Sbjct: 275 ALHQAGFLLSFGAVGGILLA---------------------NGWKSRLLKGTTLGMSLGV 313
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGLIAIL 135
++ P+Y ++ N+ +P++ FV+ + A L
Sbjct: 314 QIMTLPVTAYFYYQFPLYNVLVNLCVLPLMPFVLGFGMAGIAGAAL 359
>gi|317482798|ref|ZP_07941808.1| competence protein [Bifidobacterium sp. 12_1_47BFAA]
gi|316915760|gb|EFV37172.1| competence protein [Bifidobacterium sp. 12_1_47BFAA]
Length = 474
Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 15/150 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + ++ + +
Sbjct: 283 YGFALSSAAVLGIVLFAGRLAGAFE------------RAMPHGIAEMMAMTV--AAQLFT 328
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 329 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCEPWLAGVFAWISSWGTLV 388
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ +A + + + T V IV
Sbjct: 389 MERVALWLGGSTMAVIPWKDGVTGAVLIVA 418
>gi|221129522|ref|XP_002160469.1| PREDICTED: similar to Sex comb on midleg-like protein 1 [Hydra
magnipapillata]
Length = 756
Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 40/142 (28%), Gaps = 14/142 (9%)
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF-----VTIVVEFLLM 190
L L + V AWGL ++ ++ ++ + + +
Sbjct: 231 LGAWGLQWLVDFVTAWGLQWLV---DFVTAWGLQWLVDFVTAWGLQWLVDFVTAWGLQWL 287
Query: 191 VFCKTNIR--HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI--SNYSN 246
V T + + + L FP +P + G V + + L Y +
Sbjct: 288 VDFVTAWGLQWLVDFVTAWGLQWLVDFPQLSTPTKSYNFAGTGVRYMLNHMLAQHVGYYS 347
Query: 247 PPSFIFS--QWKSALITPFHEA 266
F S W L E
Sbjct: 348 NVGFNLSPFNWAEYLSETNSEP 369
>gi|302380667|ref|ZP_07269132.1| DNA internalization competence protein ComEC/Rec2-like protein
[Finegoldia magna ACS-171-V-Col3]
gi|302311610|gb|EFK93626.1| DNA internalization competence protein ComEC/Rec2-like protein
[Finegoldia magna ACS-171-V-Col3]
Length = 768
Score = 40.6 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 21/126 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L D F + I Y Y K K + FL +
Sbjct: 309 LLDVGFIFSFLATFTIIYLYPRFK-------------KHNKKLYNYFL------LSVMVY 349
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ F+ + +I N + +PI + V+ ++ LL+ S++ I ++ L
Sbjct: 350 LILLPIQLRFFNEYTLGFIIGNTIILPIFTVVIQLTAIV--LLIPNSINYIFVQLIKLCL 407
Query: 154 DIIIHI 159
I +I
Sbjct: 408 RTISYI 413
>gi|300716084|ref|YP_003740887.1| competence-related protein [Erwinia billingiae Eb661]
gi|299061920|emb|CAX59036.1| Putative competence-related protein [Erwinia billingiae Eb661]
Length = 754
Score = 40.6 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 23/218 (10%), Positives = 60/218 (27%), Gaps = 36/218 (16%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
++ + +++ + W ++ ++ + F
Sbjct: 336 AVAGLLFWFHWFPLPPKYAGKKRWLPLQLLHLQLGI------------FFIMMPIQLLIF 383
Query: 105 HCIPVYGLIANILAIPILSFV-VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
H I + L+ANI A+P+++F+ V L + L + L+ +
Sbjct: 384 HGISISALLANIWAVPVVTFISVPLILAALAFLPLAPLSQAFWWFADRSLEAVF------ 437
Query: 164 SVAHNEFCIGRIPETSF-----VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ +P + + + S + + + L +
Sbjct: 438 ------VPLALLPSGWLDMNRQALPISAAIWLTVIACRFCWWRSSPMTVLSLGLALACWR 491
Query: 219 ---FSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
P ++ L ++ N Y S+
Sbjct: 492 LNNEEPKWRLDMLDIGHGLAVVISANGEALVYDTGNSW 529
>gi|326800368|ref|YP_004318187.1| protein-export membrane protein SecD [Sphingobacterium sp. 21]
gi|326551132|gb|ADZ79517.1| protein-export membrane protein SecD [Sphingobacterium sp. 21]
Length = 1010
Score = 40.6 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 19/158 (12%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
G IF+I +++ GL+ANI I + F++ + +L + + I
Sbjct: 523 SVIGLVVVLIFMIFYYNRA---GLVANIAVIFNVFFIMGILASLGAVLTLPGIAGIVL-T 578
Query: 149 MAWGLDIIIHIAHRI------------SVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT 195
M +D + I RI +++ + I ++ T +V +L +F
Sbjct: 579 MGTAVDANVLIYERIREEYALGKGVRQAISDGYKHAMPSILDSQITTFLVGLILYIFGTG 638
Query: 196 NIRHIGSIMIGITIIILFTFPYSFS--PDLLISEKGNL 231
I + ++ I LFT + + +I + +
Sbjct: 639 PILGFATTLLIGIITSLFTAIFITRIIFEWMIKKDMKI 676
>gi|328882396|emb|CCA55635.1| ComEC or Rec2-related protein [Streptomyces venezuelae ATCC 10712]
Length = 920
Score = 40.6 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 15/179 (8%), Positives = 51/179 (28%), Gaps = 4/179 (2%)
Query: 53 YSIPKMIYSSESHNTWTWKKISSIKQSF---LNEIRANIGTYGSASASIFLIKHFHCIPV 109
Y + ++ + T + +++ A + ++ + +
Sbjct: 454 YGFLLSVLATGALLTVAPRWSEALRMRGVPDRLAEALAACLAAQAVCAPVVVVFAGRVSL 513
Query: 110 YGLIANILA-IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+ AN+ A + + V +A+ + V W I +A +
Sbjct: 514 VAIPANLCAELAVAPATVFGFAALALAPVWTPAGEGLAWVAGWPAGWIARVARAGAALPG 573
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
+ + +++V + + G + + + +++L +
Sbjct: 574 AEMSWPGGWWGGAALALITVVVVLGARRLPYRGPMALLVAVLLLLVVARPAPLTRWVGG 632
>gi|301623289|ref|XP_002940952.1| PREDICTED: extracellular calcium-sensing receptor-like [Xenopus
(Silurana) tropicalis]
Length = 899
Score = 40.6 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 22/201 (10%), Positives = 58/201 (28%), Gaps = 4/201 (1%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L F + + +I +I + + +K + +K S+ + +
Sbjct: 699 LRQVAFGMVFALCISCVLAKTITVVIAFNATKPGSRLRKWTGVKVSYCVIMLCALIQIID 758
Query: 94 ASASIFLIKHFHCI----PVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ + FH + +I N +F + L + + + + +
Sbjct: 759 CALWLIFSPPFHELDTDTQPGVIIVNCNEGSPTAFWCMLGYLGLLASISFIVAFLARRLP 818
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
+ + ++ ++ V + ++ +G I +
Sbjct: 819 DSFNEAKLITFSMLAFLSVWVSFIPAYLSARGMYTVAMEVFAILSSSWAVVGCIFVPKCF 878
Query: 210 IILFTFPYSFSPDLLISEKGN 230
I+LF + L KG
Sbjct: 879 IVLFRPNMNSRIHLSFKGKGA 899
>gi|329770385|ref|ZP_08261767.1| hypothetical protein HMPREF0433_01531 [Gemella sanguinis M325]
gi|328836508|gb|EGF86168.1| hypothetical protein HMPREF0433_01531 [Gemella sanguinis M325]
Length = 636
Score = 40.6 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 56/152 (36%), Gaps = 20/152 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+FD F + + + I K + + I
Sbjct: 318 IFDIGFELSF-----------------FITFSLLMSAEYIKKSKNKLQSSL--KISVISF 358
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ LI +F+ +P +++NI+ +PI S ++ P + + ++ +LS I + L
Sbjct: 359 LASMPILISNFYTVPYISVLSNIILVPIFSIIIFPLVVCSYIVFLLS-TTIFSILCKPLL 417
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+I+ +I I RI + + I+
Sbjct: 418 NIVFYIFDEIQSILLRVHPIRIGKQNIYVIIA 449
>gi|289771696|ref|ZP_06531074.1| integral membrane protein [Streptomyces lividans TK24]
gi|289701895|gb|EFD69324.1| integral membrane protein [Streptomyces lividans TK24]
Length = 392
Score = 40.6 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 16/153 (10%), Positives = 42/153 (27%), Gaps = 13/153 (8%)
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAILLMI-----LSLDNIPFGVMAWGLDIIIHIA 160
+ + G+ N+LA F V PA ++ + + L W + I IA
Sbjct: 8 RVSLVGVPCNLLA----EFAVAPATVLGFAALATAPAAMPLAKSLAWCGGWPAEWIAEIA 63
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI----RHIGSIMIGITIIILFTFP 216
+ + + + ++ + G+ + + ++++ P
Sbjct: 64 RTGAALPGAGVDWPGSWAGAALLALVTVGVLLAGRRLLRHPWWCGACALLLILVVVQPPP 123
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ +V +
Sbjct: 124 LARLIKGWPPPGWRMVMCDVGQGDALVLAAGEG 156
>gi|260664601|ref|ZP_05865453.1| competence protein [Lactobacillus jensenii SJ-7A-US]
gi|260561666|gb|EEX27638.1| competence protein [Lactobacillus jensenii SJ-7A-US]
Length = 668
Score = 40.6 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 60/151 (39%), Gaps = 9/151 (5%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK 102
G++AI + P++ + + ++ + +E G + + L+
Sbjct: 232 LLGLTAIVHLLINPRLFMNIGAILSYILVLGLKV---IKSESSFKQGMLLNLLLTPLLLF 288
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM--ILSLDNIPFGVMAWGLDIIIHIA 160
+F+ + ++ + NIL +P +FVV+P I I L L + +I ++ +G I A
Sbjct: 289 NFYQVNIFTVFFNILIVPYFNFVVMPLTFINIFLFNKFLFISDIFEKILEFGEATINSFA 348
Query: 161 HRISVAHNEFCIGRIPET-SFVTIVVEFLLM 190
G+I ++V F +
Sbjct: 349 RTNIGM---IIFGKITWWQVLFLLIVSFCYL 376
>gi|320010876|gb|ADW05726.1| ComEC/Rec2-related protein [Streptomyces flavogriseus ATCC 33331]
Length = 731
Score = 40.6 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Query: 106 CIPVYGLIANILA-IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+ + + N+LA + V+ +A+ + L + + V + I +A +
Sbjct: 348 RVSLVAIPCNLLAEFAVAPATVLGFAALAVAPVSLPVAGVLAHVAGLPVGWIASVARTGA 407
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ V +++ +
Sbjct: 408 ALPGAELDWPGGWRGAALLAVLTIVLTLSARRLA 441
>gi|145219515|ref|YP_001130224.1| ComEC/Rec2-related protein [Prosthecochloris vibrioformis DSM 265]
gi|145205679|gb|ABP36722.1| ComEC/Rec2-related protein [Chlorobium phaeovibrioides DSM 265]
Length = 757
Score = 40.6 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 23/217 (10%), Positives = 55/217 (25%), Gaps = 13/217 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ A + I P PG F + +I F + +
Sbjct: 352 RQSFSLNALALADVIILFLDPLDLFSPG-----FQMSNAAVLSILLFNPRLNQLLNRGGG 406
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ S + + +F + +AN + S +
Sbjct: 407 GAGRRIWRF-------VNSSLLLTFAASLGVAPLIAWYFGTFSLIAFVANFPVVLFSSLM 459
Query: 126 VIP-AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ G++ + L+ + + + + + A S R +
Sbjct: 460 LYALFGMLLLNLVSAAAAGVLGAAAQFFAALALDSASFFSGFPFGVVNFRPAAFELLLFF 519
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ F R + + + + + FSP
Sbjct: 520 FLLPVPFFFLVRNRWKEGVGVLLVATNILVWQALFSP 556
>gi|300780673|ref|ZP_07090528.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300533659|gb|EFK54719.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 535
Score = 40.2 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 50/180 (27%), Gaps = 17/180 (9%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
DF F+ + I + + + + ++ +
Sbjct: 303 DFAFALSVAATAGIVAVSPLFYRMLAPLGWPDILNR-------------ALSVALAADLA 349
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLD 154
+ + + V +IAN++ P+ V + AIL I S L +A
Sbjct: 350 TAPIIAGMVGRVSVVSVIANVVVSPVTGAVTVLGMAAAILAQIHSALAAPVLWFVAPMAG 409
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
I +A + V + +++ F R + + I +
Sbjct: 410 WIRTVAEIGAGLPGATARA---APLVVVVCYGWIIAGFWARRPRLTVACGAVVLTIAVAG 466
>gi|168698671|ref|ZP_02730948.1| probable competence protein ComEC/Rec2 [Gemmata obscuriglobus UQM
2246]
Length = 272
Score = 40.2 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 22/227 (9%), Positives = 63/227 (27%), Gaps = 9/227 (3%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + ++ + P+ P F +F + + + +
Sbjct: 9 IVLRRRVILANVLAFAWLVVIALNPTDP-FTAGCQLSFLCVFVLLFGAARWLKPRDLTPI 67
Query: 62 SESHNTWTWKKISSIKQSFLNEI-RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + + + + +G +A ++ + ++ +
Sbjct: 68 EQLIDETRGPTEKAARAALRWAWNLFAVGFILTAVNVPLVLAWQNVASPVAVLIGPPLVV 127
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMA----WGLDIIIHIAHRISVAHNEFCIGRIP 176
+ +I ++ +L + PF + G + I+H+A R+ P
Sbjct: 128 LTGVALIAGFVLLVLSPLAVWAAWPFARVTEACLAGCEWIVHLADRV--PGGHVYAPGPP 185
Query: 177 ETSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTFPYSFSPD 222
V V +V RH+ ++ + + D
Sbjct: 186 MWWLVGFYVLVAGLVLLDGRRSRHLFVALVVFSTFGAALGLSPHTSD 232
>gi|189439193|ref|YP_001954274.1| putative hydrolase [Bifidobacterium longum DJO10A]
gi|189427628|gb|ACD97776.1| Putative hydrolase [Bifidobacterium longum DJO10A]
Length = 474
Score = 40.2 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 15/150 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + ++ + +
Sbjct: 283 YGFALSSAAVLGIVLFAGRLAGAFE------------RAMPHGIAEMMAMTV--AAQLFT 328
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 329 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCEPWLAGVFAWISSWGTLV 388
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ +A + + + T V IV
Sbjct: 389 MERVALWLGGSTMAVIPWKDGVTGAVLIVA 418
>gi|320155802|ref|YP_004188181.1| putative hydrolase of the metallo-beta-lactamase superfamily,
clustered with KDO2-Lipid A biosynthesis genes [Vibrio
vulnificus MO6-24/O]
gi|319931114|gb|ADV85978.1| predicted hydrolase of the metallo-beta-lactamase superfamily,
clustered with KDO2-Lipid A biosynthesis genes [Vibrio
vulnificus MO6-24/O]
Length = 629
Score = 40.2 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 25/164 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+ + +S + + + I +K F I +
Sbjct: 211 SLWLSFLAVSCVFLVVDLRESSS----------SWIGKMKSVF------CIQGMLLLYLA 254
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DII 156
F + + + N L IP S VV+P +A++L +LD +P M W L D+
Sbjct: 255 PVTAYFFSGLSLAAWLYNFLFIPWFSLVVVPVIFVALVLT--ALDMMPVASMLWQLADLS 312
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
+ + + V + + +RH
Sbjct: 313 LWPLTY------AMPYAHLGWWGLSSFQVVLVALCALAVMLRHF 350
>gi|160901729|ref|YP_001567310.1| ComEC/Rec2-related protein [Petrotoga mobilis SJ95]
gi|160359373|gb|ABX30987.1| ComEC/Rec2-related protein [Petrotoga mobilis SJ95]
Length = 369
Score = 40.2 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 52/184 (28%), Gaps = 33/184 (17%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
F I + L P+ +F Y I + +
Sbjct: 209 SSFNILGLIGYLNLLFIPNNLMN-----VSFQMSYAATFMILFTMN------------HI 251
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+ S+ ++ + HF I + GL + P +S ++
Sbjct: 252 ENQYFRSL----------SVPIAAYVGIFPIALIHFGEISLIGLFITPILTPAISLLI-- 299
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEF 187
+ +L+ + + A + + + + EF IP + I + +
Sbjct: 300 LCSVLSILLPFNFVHSFSTFFALSIK---NFVNLFTFWEPIEFNSLFIPLFLWSFIFLLY 356
Query: 188 LLMV 191
+ ++
Sbjct: 357 IWLL 360
>gi|27365417|ref|NP_760945.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
vulnificus CMCP6]
gi|37680542|ref|NP_935151.1| Rec2-related protein [Vibrio vulnificus YJ016]
gi|27361564|gb|AAO10472.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
vulnificus CMCP6]
gi|37199290|dbj|BAC95122.1| Rec2-related protein [Vibrio vulnificus YJ016]
Length = 749
Score = 40.2 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 25/164 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+ + +S + + + I +K F I +
Sbjct: 331 SLWLSFLAVSCVFLVVDLRESSS----------SWIGKMKSVF------CIQGMLLLYLA 374
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DII 156
F + + + N L IP S VV+P +A++L +LD +P M W L D+
Sbjct: 375 PVTAYFFSGLSLAAWLYNFLFIPWFSLVVVPVIFVALVLT--ALDMMPVASMLWQLADLS 432
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
+ + + V + + +RH
Sbjct: 433 LWPLTY------AMPYAHLGWWGLSSFQVVLVALCALAVMLRHF 470
>gi|290580889|ref|YP_003485281.1| putative competence protein [Streptococcus mutans NN2025]
gi|254997788|dbj|BAH88389.1| putative competence protein [Streptococcus mutans NN2025]
Length = 743
Score = 40.2 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 6/128 (4%)
Query: 37 FNF--SSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI---GTY 91
F F + + +F IP + ++ ++ + I + + I
Sbjct: 299 FGFKKQDNFALTLFVMFFL-IPNFLLTTGGVLSFAYAFILIMIDFETLSLLKRILFQTFS 357
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
S L+ +F ++ IL I +++P +A L
Sbjct: 358 LSLGILPLLMWYFSSFQPLSILLTILFSFIFDNLMLPFLTLAYFLSPFVSLACFNPAFRL 417
Query: 152 GLDIIIHI 159
II+ I
Sbjct: 418 LERIIVQI 425
>gi|306833040|ref|ZP_07466172.1| possible competence protein EC [Streptococcus bovis ATCC 700338]
gi|304424939|gb|EFM28073.1| possible competence protein EC [Streptococcus bovis ATCC 700338]
Length = 712
Score = 40.2 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 69/227 (30%), Gaps = 8/227 (3%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI---GTYGSASASIFLI 101
++ F +P + + ++T+ I S I S ++ LI
Sbjct: 277 ALTLFVLFIVMPNFLLTMGGILSFTYAFILSFINFDDISRYQKIIAESLTISLASLPLLI 336
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
F ++ + +++P I +L L G L+ +I
Sbjct: 337 HFFAVFQPLSVLLTAIFSVAFDTIMLPMLSIIFILSPLVKLTCFNGCF-VFLETVIKHTK 395
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
I F + + +++ L + I + + + P
Sbjct: 396 AILGGPIVFGKPNLGILVLLFLMLGVLYDC-WRRKKTAIFLVSLVALLFFQIKHPLENEV 454
Query: 222 DLLISEKGNLVALVD--KNTLISNYSNPPSFIFSQ-WKSALITPFHE 265
++ +G+ + + D NTL+ + SF W+ L E
Sbjct: 455 TVVDIGQGDSIFVRDVKGNTLLIDVGGKVSFSEKNAWQERLTDSNAE 501
>gi|227364783|ref|ZP_03848832.1| competence protein ComEC [Lactobacillus reuteri MM2-3]
gi|325682590|ref|ZP_08162107.1| ComE operon protein 3 [Lactobacillus reuteri MM4-1A]
gi|227070242|gb|EEI08616.1| competence protein ComEC [Lactobacillus reuteri MM2-3]
gi|324978429|gb|EGC15379.1| ComE operon protein 3 [Lactobacillus reuteri MM4-1A]
Length = 703
Score = 40.2 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 7/132 (5%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI-----GTYGSASASIFLIKHF 104
G+ S+ + ++S + L + ++ + + L+ +
Sbjct: 252 GWALSLLIGLVIDPLLLLTLGGQLSYLLSFILQVLPESVRGFKQSLLLNLISLPSLLSYV 311
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+ + + + L IP+ S +V PA L+ L L ++ GL +I + +S
Sbjct: 312 YEVHLLSFGVSYLIIPLFSTIVFPAVLVGALS--FKLFEPLTYLINAGLKCFQYILNWLS 369
Query: 165 VAHNEFCIGRIP 176
G+ P
Sbjct: 370 DFPGMIHFGKPP 381
>gi|322691335|ref|YP_004220905.1| hypothetical protein BLLJ_1146 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456191|dbj|BAJ66813.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 446
Score = 40.2 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 15/150 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + ++ + +
Sbjct: 255 YGFALSSAAVLGIVLFAGRLAGAFE------------RAMPHGIAEMMAMTV--AAQLFT 300
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 301 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCEPWLAGVFAWISSWGTLV 360
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ +A + + + T V IV
Sbjct: 361 MERVALWLGGSTMAVIPWKDGVTGAVLIVA 390
>gi|297205844|ref|ZP_06923239.1| competence protein ComEC [Lactobacillus jensenii JV-V16]
gi|297148970|gb|EFH29268.1| competence protein ComEC [Lactobacillus jensenii JV-V16]
Length = 750
Score = 40.2 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 34/201 (16%), Positives = 73/201 (36%), Gaps = 14/201 (6%)
Query: 38 NFSSY---YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
F G++AI + P++ + + ++ I ++ G +
Sbjct: 306 AFHISNSDLLGLTAIVHLVITPRLFMNIGAILSYVLVLGLKI---VKSDNSFKQGVLLNL 362
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIPFGVMAWG 152
+ L+ +F+ + V ++ NIL +P +FVV+P I I L L + + ++ G
Sbjct: 363 ILTPLLLFNFYQVNVLTVVFNILIVPYFNFVVMPLTFINIFLFNNFLVVSELFEKILEIG 422
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPET---SFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
II A G+I + I +L+ K ++ +I +
Sbjct: 423 ETIINSFAKTNIGM---VIFGKISWWQCLFLLVISFGYLIFRLEKFKLKLPAITLIIAYL 479
Query: 210 IILFTFPYSFSPDLLISEKGN 230
+I + + + + G
Sbjct: 480 LIFISIHFPLQGQVTFIDVGQ 500
>gi|91200435|emb|CAJ73482.1| similar to thiol:disulfide interchange protein [Candidatus Kuenenia
stuttgartiensis]
Length = 601
Score = 40.2 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 34/229 (14%), Positives = 72/229 (31%), Gaps = 35/229 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + I Y+ + +S + + + + + + S
Sbjct: 232 AFLLSLIYVLGISIVYAALGVTAASTGALFGAALQSPWVIGFV-------VAVFVALAMS 284
Query: 98 IFLIKHFHCIPVY-------------------GLIANILAIPILSFVVIPAGLIAILLMI 138
+F + +P + GLI+ I+A P + ++ +
Sbjct: 285 MFGFYYL-RVPSFISDRLGGRTGRGVAGVFVMGLISGIIASPCIGPILASLLVYIASTGN 343
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI--VVEFLLMVFCKTN 196
+ L V AWGL +++ + S T+ + FLL+
Sbjct: 344 IFLGFWMLFVFAWGLGVLLIVLGTFS---GAVKALPRSGAWMETVERIFGFLLIGAAFYY 400
Query: 197 IRHI---GSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+R I G+ +I + I ++ +S D L + + LI+
Sbjct: 401 LRLIIPEGAFIILLGIFLIVAAVFSGGFDKLTFDSSRFQRVRKSFGLIA 449
>gi|148543877|ref|YP_001271247.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus reuteri DSM 20016]
gi|184153277|ref|YP_001841618.1| DNA internalization-related competence protein ComEC [Lactobacillus
reuteri JCM 1112]
gi|148530911|gb|ABQ82910.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus reuteri DSM 20016]
gi|183224621|dbj|BAG25138.1| DNA internalization-related competence protein ComEC [Lactobacillus
reuteri JCM 1112]
Length = 709
Score = 40.2 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 7/132 (5%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI-----GTYGSASASIFLIKHF 104
G+ S+ + ++S + L + ++ + + L+ +
Sbjct: 258 GWALSLLIGLVIDPLLLLTLGGQLSYLLSFILQVLPESVRGFKQSLLLNLISLPSLLSYV 317
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+ + + + L IP+ S +V PA L+ L L ++ GL +I + +S
Sbjct: 318 YEVHLLSFGVSYLIIPLFSTIVFPAVLVGALS--FKLFEPLTYLINAGLKCFQYILNWLS 375
Query: 165 VAHNEFCIGRIP 176
G+ P
Sbjct: 376 DFPGMIHFGKPP 387
>gi|326803913|ref|YP_004321731.1| DNA internalization competence protein ComEC/Rec2-like protein
[Aerococcus urinae ACS-120-V-Col10a]
gi|326651333|gb|AEA01516.1| DNA internalization competence protein ComEC/Rec2-like protein
[Aerococcus urinae ACS-120-V-Col10a]
Length = 774
Score = 40.2 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 78/268 (29%), Gaps = 41/268 (15%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ DP+ L P +F F Y + + P
Sbjct: 298 DRPVDPWAGLAWSVVFILLINPQA-----IFSLGFQLSYALTATLLIIKQAP------PF 346
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ W + I S+ + FLI L N + S
Sbjct: 347 KHAWQEEFIFSL--------------ACTLVTIPFLIVSQAGFSWLVLWVNYFYSWLFSV 392
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIII----HIAHRISVAHN-EFCIGRIPETS 179
+ P L+ + L I ++AW L +I ++ S + G +P
Sbjct: 393 CLFPGLLLVVGLGIG-GLGWLVPLVAWPLTWVILHLEKLSVFFSDLPGFYWLTGHMPFVF 451
Query: 180 FVTIVVEFL-LM---VFCKTNIRHIGSIMIGITIIILF--TFPYSFSPDLLISEKGNLVA 233
+ + + V K R ++ + + + LF P L I +G+ +
Sbjct: 452 ILLYCLVLAYWLDRQVLAKRKGRGWLALTLALLGLYLFPYLSPLGQVAVLDI-GQGDCIL 510
Query: 234 LV---DKNTLISNYSNPPSFIFSQWKSA 258
+ + + + + P+F W+
Sbjct: 511 VKPPFSASAYLIDAAGRPTFPKEDWQKR 538
>gi|296219922|ref|XP_002756091.1| PREDICTED: serine/threonine-protein kinase TAO2 isoform 2 [Callithrix
jacchus]
Length = 1121
Score = 40.2 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 62/227 (27%), Gaps = 14/227 (6%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L +V + R + + +G+ L +P P + ++ G V
Sbjct: 897 HLPPSLFLLLAQGTALGVVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAVAAGGRWV 956
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 957 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPVP 1016
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKL 342
R + V + + + L I + + + +
Sbjct: 1017 GPRRRNHRTAQHPLALLARVWALCKGWNWRLARASQGLASHLPLWAIHTLASWGLLRGER 1076
Query: 343 CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ G ++ PW
Sbjct: 1077 PTRIPRLLPRSQRRLGPPA---SCQPLSGTLAGRRSRTRQSRALPPW 1120
>gi|325977806|ref|YP_004287522.1| competence protein ComEC [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325177734|emb|CBZ47778.1| competence protein ComEC [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 712
Score = 40.2 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 69/227 (30%), Gaps = 8/227 (3%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI---GTYGSASASIFLI 101
++ F +P + ++ ++T+ I S I S ++ LI
Sbjct: 277 ALTLFVLFIVMPNFLLTTGGILSFTYAFILSFINFDDISRYQKIIAESLTISLASLPLLI 336
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
F ++ + +++P + +L L G L+ +I
Sbjct: 337 HFFAVFQPLSVLLTAIFSVAFDTIMLPMLSLIFILSPLVKLTCFNGCF-VFLETVIKNTK 395
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
I F + + + + L + I + + + P
Sbjct: 396 AILGGPIVFGKPSLGILVLLFLTLGVLYDC-WRRKKMAIFLVSLVGLLFFQIKHPLENEV 454
Query: 222 DLLISEKGNLVALVD--KNTLISNYSNPPSFIFSQ-WKSALITPFHE 265
++ +G+ + + D +TL+ + SF W+ L E
Sbjct: 455 TVVDIGQGDSIFVRDVKGHTLLIDVGGKVSFSEKNAWQERLTDSNAE 501
>gi|24379099|ref|NP_721054.1| putative competence protein [Streptococcus mutans UA159]
gi|24377000|gb|AAN58360.1|AE014906_6 putative competence protein [Streptococcus mutans UA159]
Length = 744
Score = 40.2 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 6/128 (4%)
Query: 37 FNF--SSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI---GTY 91
F F + + +F IP + ++ ++ + I + + I
Sbjct: 300 FGFKKQDNFALTLFVMFFL-IPNFLLTTGGVLSFAYAFILIMIDFETLSLLKRILFQTFS 358
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
S L+ +F ++ IL I +++P +A L
Sbjct: 359 LSLGILPLLMWYFSSFQPLSILLTILFSFIFDNLMLPFLTLAYFLSPFVSLACFNPAFRL 418
Query: 152 GLDIIIHI 159
II+ I
Sbjct: 419 LERIIVQI 426
>gi|300741550|ref|ZP_07071571.1| ComEC/Rec2-related protein [Rothia dentocariosa M567]
gi|300380735|gb|EFJ77297.1| ComEC/Rec2-related protein [Rothia dentocariosa M567]
Length = 553
Score = 40.2 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 24/188 (12%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ + + P G D F +++ + T
Sbjct: 355 TLSALATTIVFCLIAAPKLAG--DLGFILSTVATASLIAL------------GPSLTRLL 400
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+ + + I A+ + I I IP+Y + AN+LA P+ + + + AGL
Sbjct: 401 MRLLPHTLAELIAASASASLWCTPVILGIS--GKIPLYTIPANMLAAPLTA-ITMFAGLA 457
Query: 133 AILLMILSLDNIPFGVMAWG---LDIIIHIAHRISVAHN----EFCIGRIPETSFVTIVV 185
A L ++ I + G I +IA + A + VT+ V
Sbjct: 458 AFLSYSINFTAITDIALILGRIPAQGIEYIAKYFAHAPANPLDVDVTPASVAFAGVTVFV 517
Query: 186 EFLLMVFC 193
LL+
Sbjct: 518 GSLLIWLW 525
>gi|291456921|ref|ZP_06596311.1| conserved ComA protein [Bifidobacterium breve DSM 20213]
gi|291382198|gb|EFE89716.1| conserved ComA protein [Bifidobacterium breve DSM 20213]
Length = 568
Score = 40.2 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 22/185 (11%), Positives = 51/185 (27%), Gaps = 24/185 (12%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + + S + I
Sbjct: 378 YGFALSSAAVLGIVLFAGRLSRVLG------------HVLPHSLAEMMAMTI--AAQLFT 423
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + I + L + L + V +WG +
Sbjct: 424 LPIQVLMEPELPLLSVPANLLVAPFVGLSTITGLMSLALAWCMPWLAGVFAWVSSWGTLV 483
Query: 156 IIHIAHR-----ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH----IGSIMIG 206
+ +A I+ + + + + LL++ + R G +
Sbjct: 484 MERVAMWLGSNEIATLPWKDGVVGAALILLAELGIGALLVLVTRQVKRVRQPEAGLPGMR 543
Query: 207 ITIII 211
+
Sbjct: 544 FGSVW 548
>gi|303233814|ref|ZP_07320468.1| DNA internalization competence protein ComEC/Rec2-like protein
[Finegoldia magna BVS033A4]
gi|302495248|gb|EFL55000.1| DNA internalization competence protein ComEC/Rec2-like protein
[Finegoldia magna BVS033A4]
Length = 768
Score = 40.2 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 21/126 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L D F + I Y Y K K + FL +
Sbjct: 309 LLDVGFIFSFLATFTIIYLYPRFK-------------KYNKKLYNYFL------LSGMVY 349
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ F+ + +I N + +PI + V+ ++ LL+ S++ I ++ L
Sbjct: 350 LILLPIQLRFFNEYTLGFIIGNTIILPIFTVVIQLTAIV--LLIPNSINYIFVQLIKLCL 407
Query: 154 DIIIHI 159
I +I
Sbjct: 408 KTISYI 413
>gi|169824485|ref|YP_001692096.1| putative integral membrane protein [Finegoldia magna ATCC 29328]
gi|167831290|dbj|BAG08206.1| putative integral membrane protein [Finegoldia magna ATCC 29328]
Length = 768
Score = 40.2 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 21/126 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L D F + I Y Y K K + FL +
Sbjct: 309 LLDVGFIFSFLATFTIIYLYPRFK-------------KYNKKLYNYFL------LSGMVY 349
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ F+ + +I N + +PI + V+ ++ LL+ S++ I ++ L
Sbjct: 350 LILLPIQLRFFNEYTLGFIIGNTIILPIFTVVIQLTAIV--LLIPNSINYIFVQLIKLCL 407
Query: 154 DIIIHI 159
I +I
Sbjct: 408 KTISYI 413
>gi|15606730|ref|NP_214110.1| hypothetical protein aq_1618 [Aquifex aeolicus VF5]
gi|14916875|sp|O67545|Y1618_AQUAE RecName: Full=Uncharacterized protein aq_1618
gi|2983969|gb|AAC07516.1| putative protein [Aquifex aeolicus VF5]
Length = 413
Score = 40.2 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 18/168 (10%), Positives = 48/168 (28%), Gaps = 27/168 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+ ++F + + I + +
Sbjct: 258 SYSYSFWLSFFAVLYILLVLKDFE---------------------GGNTSKALMVSLGAF 296
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP-FGVMAWG 152
+ I F + + L P+LS ++ L +L ++ P +M
Sbjct: 297 TGTAPL-IASFSFVTPLSV----LLTPVLSPLIFAYALFGVLSLLTLFSFPPSLILMNLS 351
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
++I + S + PE +F+ +++ + + K + +
Sbjct: 352 GELIFRVLEFFSDFSPKILSNVKPEEAFILLILGAIGLYVTKGYSKLL 399
>gi|310287548|ref|YP_003938806.1| hydrolase [Bifidobacterium bifidum S17]
gi|309251484|gb|ADO53232.1| Putative hydrolase [Bifidobacterium bifidum S17]
Length = 689
Score = 40.2 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 17/188 (9%), Positives = 50/188 (26%), Gaps = 31/188 (16%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQS 79
I L PS + F+ + I F ++ +
Sbjct: 433 IVLLIAPSMSVS-----YGFALSCAAVLGIVLFAGP-------------LTDWLACMLPR 474
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
L+ A + + +P+ + AN+L P++ F + + + ++
Sbjct: 475 LLSAPLAMT-IAAQSLTLPIQVLMDPQLPLASVPANLLVGPVVGFATMAGLVALFISWLM 533
Query: 140 S-LDNIPFGVMAWGLDIIIHIAH-----------RISVAHNEFCIGRIPETSFVTIVVEF 187
+ + G ++ +A + + +++
Sbjct: 534 PQCGYVLAWIAGCGTSVMERVAAMVSDNEFATMPWAGGIPGALLMVLVESACATVLILAT 593
Query: 188 LLMVFCKT 195
+ ++
Sbjct: 594 RWLRLLRS 601
>gi|260776189|ref|ZP_05885084.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio coralliilyticus ATCC BAA-450]
gi|260607412|gb|EEX33677.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio coralliilyticus ATCC BAA-450]
Length = 745
Score = 39.8 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 31/217 (14%), Positives = 73/217 (33%), Gaps = 31/217 (14%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
+ P A GL ++ I F + + S + + +
Sbjct: 322 TDPFAAASSGL-----WLSMWAVAIILVF-------------VSLQNRLWSPWVNALVLQ 363
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ IG + S F + + N++ +P SFVV+P L+A+L + +
Sbjct: 364 LTLVIGMTPIVAIS------FQGLSLASFAYNLIFVPWFSFVVVPLSLLALLAETVFNVS 417
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG-S 202
+ + + ++ + + V LL++ T + G +
Sbjct: 418 VFWQWVDITIEPV------FYALSFADSSWVPLSHFLTVLFVGALLLLLFSTFLSIQGKA 471
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ I ++ + + + + + G+ +A+V K
Sbjct: 472 LFILCALVWVIDWKEKPVWQVFVLDVGHGLAIVVKQG 508
>gi|21221026|ref|NP_626805.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|6714673|emb|CAB66245.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
Length = 855
Score = 39.8 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 16/153 (10%), Positives = 42/153 (27%), Gaps = 13/153 (8%)
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAILLMI-----LSLDNIPFGVMAWGLDIIIHIA 160
+ + G+ N+LA F V PA ++ + + L W + I IA
Sbjct: 471 RVSLVGVPCNLLA----EFAVAPATVLGFAALATAPAAMPLAKSLAWCGGWPAEWIAAIA 526
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI----RHIGSIMIGITIIILFTFP 216
+ + + + ++ + G+ + + ++++ P
Sbjct: 527 RTGAALPGAGVDWPGSWAGAALLALVTVGVLLAGRRLLRHPWWCGACALLLILVVVQPPP 586
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ +V +
Sbjct: 587 LARLIKGWPPPGWRMVMCDVGQGDALVLAAGEG 619
>gi|306830923|ref|ZP_07464085.1| possible competence protein EC [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426946|gb|EFM30056.1| possible competence protein EC [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 712
Score = 39.8 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 31/227 (13%), Positives = 69/227 (30%), Gaps = 8/227 (3%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI---GTYGSASASIFLI 101
++ F +P + ++ ++T+ I S I S ++ LI
Sbjct: 277 ALTLFVLFIVMPNFLLTTGGILSFTYAFILSFINFDDISRYQKIIAESLTISLASLPLLI 336
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
F ++ + +++P I +L L G L+ +I
Sbjct: 337 HFFAVFQPLSVLLTAIFSVAFDTIMLPMLSIVFILSPLVKLTCFNGCF-VFLETVIKNTK 395
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
I F + + + + L + I + + + P
Sbjct: 396 AILGGPIVFGKPSLGILVLLFLTLGVLYDC-WRRKKMAIFLVSLVGLLFFQIKHPLENEV 454
Query: 222 DLLISEKGNLVALVD--KNTLISNYSNPPSFIFSQ-WKSALITPFHE 265
++ +G+ + + D +TL+ + SF W+ L E
Sbjct: 455 TVVDIGQGDSIFVRDVKGHTLLIDVGGKVSFSEKNAWQERLTDSNAE 501
>gi|77408884|ref|ZP_00785610.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae COH1]
gi|77172523|gb|EAO75666.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae COH1]
Length = 670
Score = 39.8 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 56/172 (32%), Gaps = 5/172 (2%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
S L +F +I L + +P + +L + +
Sbjct: 282 SLTVSVGILPILTYYFSGFQPISIILTALLSFAFDIIFLPLLTVIFVLSPFVKLSCINSL 341
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
L++++ ++ F + + I++ L + R+ ++I T
Sbjct: 342 FEI-LEVLLKWTGQLFPRPLIFGKPSLFLLIVMIIILGLLYDYYHSKCFRYCSLLII-FT 399
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVD--KNTLISNYSNPPSFIF-SQWKS 257
+ + P + +L +G+ + + D T++ + F +WK
Sbjct: 400 LFFITKNPITNEVAILDVGQGDSILVRDWLGKTILIDTGGRVRFEQPEEWKQ 451
>gi|330975227|gb|EGH75293.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 738
Score = 39.8 bits (91), Expect = 0.77, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 55/190 (28%), Gaps = 48/190 (25%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQS 79
+ + P PG F + + + + S W+ S ++
Sbjct: 313 VVLIFEPLVTLQPG-----FWLSFAAVGILILIF----------SGRLGAWRWWQSWTRA 357
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+ + + I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 358 QWLIAVGLLPILLALNLP---------ISLSGPFANLLAVPWVSVIVLPPALLGTLLLPV 408
Query: 140 SL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-------------------- 178
+ + L + ++ A + +P
Sbjct: 409 PVVGEGLLWLAGGALQWLFVFLDAVAAALPAWLPSAVPIWAWWLSLLGALLLLLPKGVPM 468
Query: 179 ---SFVTIVV 185
+ +++
Sbjct: 469 RPLGWPLLLL 478
Score = 37.1 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 83/258 (32%), Gaps = 18/258 (6%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
P + +L PSG P FD+ + I A G ++ + +
Sbjct: 119 QPVNSGERWRMAVKLKRPSGLVNPYAFDYEAWLLAQRIGATGTVVDGERLAPARAAWRDA 178
Query: 69 TWKKISSI--KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+++ ++ + +G S+S + + ++L I +
Sbjct: 179 LRQRLLAVDAQGREGGLAALVLGDGSGLSSSDW------QVLQDTGTVHLLVISGQHIGL 232
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIH-IAHRISVAHNEFCIGRIPETSFVTIVV 185
+ + A++ L L + A S A + V+
Sbjct: 233 LAGVIYALVA---GLARWGLWP--RSLPWLPWACALAFSAALGYGLLAGFEVPVRRACVM 287
Query: 186 EFLLMVFCKTNIRHIGSIMIGIT---IIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+++ + RH+G + + ++++F + P +S + ++ + +
Sbjct: 288 VAMVL-LWRLRFRHLGVVWPLLLSFNVVLIFEPLVTLQPGFWLSFAAVGILILIFSGRLG 346
Query: 243 NYSNPPSFIFSQWKSALI 260
+ S+ +QW A+
Sbjct: 347 AWRWWQSWTRAQWLIAVG 364
>gi|304385134|ref|ZP_07367480.1| metallo-beta-lactamase superfamily hydrolase [Pediococcus
acidilactici DSM 20284]
gi|304329328|gb|EFL96548.1| metallo-beta-lactamase superfamily hydrolase [Pediococcus
acidilactici DSM 20284]
Length = 752
Score = 39.8 bits (91), Expect = 0.77, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 52/146 (35%), Gaps = 10/146 (6%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK 102
+ + I + P ++ ++ + + + + + +F +
Sbjct: 314 WCIVLLINLWL-NPFVLLQMGGQLSYLLSLVLISQSTTSSLKISFKLFLVEIPIILFSMY 372
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
H + ++ N+L +P+ S +VIPA LIA L + G++ + R
Sbjct: 373 KIHLLT---VLFNLLCVPLFSSLVIPAVLIAFC---FPLTASVINQVIIGVEWGL---QR 423
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFL 188
+ IG+ + ++V L
Sbjct: 424 LDQLPGLLLIGKPSRWLVMFLLVIAL 449
>gi|269218612|ref|ZP_06162466.1| ComEC/Rec2-related protein [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211723|gb|EEZ78063.1| ComEC/Rec2-related protein [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 760
Score = 39.8 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 26/243 (10%), Positives = 59/243 (24%), Gaps = 29/243 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L I + P+ +T L P + F I F +
Sbjct: 317 LGIGRASQAVPSLSTAVLGVTLVDPWLAVS-----YGFLLSASATLGIVCFAEPLTARLA 371
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+++ + + L ++G+ AN+L P+
Sbjct: 372 AKAPRLLAE--------------LVAVPLVAQLACLPVLALFTDTGSIWGVPANMLVAPV 417
Query: 122 LSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++ + + A+ I L A I +A ++
Sbjct: 418 VAPLTVCGLATALASPIFPWLAEAALVPSAMATWWIERVATTLAKWPGS---------GI 468
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ +V I + + ++ T+ + I++ V
Sbjct: 469 GLLASFAFCLVLLAALIARKALGFVVVAALVAVTWWTGRRAPIEIADGWEAVQCDVGQGS 528
Query: 241 ISN 243
Sbjct: 529 GLL 531
>gi|257068897|ref|YP_003155152.1| ComEC/Rec2-related protein [Brachybacterium faecium DSM 4810]
gi|256559715|gb|ACU85562.1| ComEC/Rec2-related protein [Brachybacterium faecium DSM 4810]
Length = 787
Score = 39.8 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 16/149 (10%), Positives = 42/149 (28%), Gaps = 3/149 (2%)
Query: 47 SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN--EIRANIGTYGSASASIFLIKHF 104
+++G+ S + + + + + + + L+
Sbjct: 343 ASVGFLLSGLATAAILIAAPPLATALVELSGERIGRTTALVLAVPLVAQLACTPVLVLLT 402
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRI 163
I ++ + N++ P++ + L +L + +A G +++ IA
Sbjct: 403 PEISLWAVPVNMIVGPLVGPTTVIGLLALVLGTVWPAAAALLWSVAAGGAHLVLLIARAA 462
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
T V V L
Sbjct: 463 DALPGSRIAVPEGATGAVLAVGALLAATI 491
>gi|25028804|ref|NP_738858.1| hypothetical protein CE2248 [Corynebacterium efficiens YS-314]
gi|259507869|ref|ZP_05750769.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|23494090|dbj|BAC19058.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259164662|gb|EEW49216.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 548
Score = 39.8 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 17/221 (7%), Positives = 53/221 (23%), Gaps = 21/221 (9%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+++ +P L P + F + I + + + +
Sbjct: 277 SRRMEPVHGLCLAVIGLLLWDPDLAV-----QYGFILSVVATAGIVMLFPLLYRVLARTG 331
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + + + ++AN+L P ++
Sbjct: 332 WPDILVR-------------AVAVAVAADVVTMPVIAVMAGQVSLVAVLANVLVAPAVAP 378
Query: 125 VVIPAGLIAIL-LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
V + + +L L L+ + + I + + +
Sbjct: 379 VTVVGLIAVVLTLAPGGLEVLALRICEPFTWWIHQVGSVCQGLPISTVGTGEGLLGTLWV 438
Query: 184 VVEFLLMVFC--KTNIRHIGSIMIGITIIILFTFPYSFSPD 222
V ++ + R + + + + D
Sbjct: 439 VTACCWIIVGIHRGLARVMAVLFTVLLAFHWYGGRLPPRVD 479
>gi|325570544|ref|ZP_08146270.1| competence protein ComEC [Enterococcus casseliflavus ATCC 12755]
gi|325156390|gb|EGC68570.1| competence protein ComEC [Enterococcus casseliflavus ATCC 12755]
Length = 747
Score = 39.8 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 72/225 (32%), Gaps = 9/225 (4%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
GI + PK++ + + + +++ +A + + F
Sbjct: 311 GIVLTALLFVDPKVLLQTSGQLSLLMTFLIVMQRPIKLTWFWRSQFLTVLAAPVIVSL-F 369
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+ P++G + +P V++PA + + L + GL +++ +
Sbjct: 370 YEFPLFGGFLTFVFLPFFQMVLLPACFLMFVTGTLFPTISGLIALFEGL-LLLMEVVVGA 428
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF----TFPYSFS 220
V +G +P L+ + R + I + + I+F P
Sbjct: 429 VGGVSITVGAVPA-GLAASCCLLSLLCY--QKKRWLLVICFSLVVPIVFQKNRVLPTISY 485
Query: 221 PDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
D+ + L A ++ + + SF W+ E
Sbjct: 486 VDVGQGDSIVLQAEKNREVYVIDTGGSLSFPKENWQERKRQAAAE 530
>gi|119469488|ref|ZP_01612392.1| predicted inner membrane protein [Alteromonadales bacterium TW-7]
gi|119447023|gb|EAW28293.1| predicted inner membrane protein [Alteromonadales bacterium TW-7]
Length = 359
Score = 39.8 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 58/192 (30%), Gaps = 14/192 (7%)
Query: 42 YYKGISAIGYFYSIPKMIYSS------ESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
Y + + +F K+ + + + + Q +N IR +
Sbjct: 165 YLVLVPLLVFFMLKDKLELTGSVAKLIPQQRRLILQVWNEMNQQIMNYIRGKVFEILIVG 224
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
F+ F + L+ ++ +L IP A++ + ++ + +
Sbjct: 225 GVSFIAFTFLDLRYAALLGVLVGFSVL----IPFVGAALVTIPVAAVALFQFGLETQFWT 280
Query: 156 IIHIAHRISVAHNEFCIGRIPETSF----VTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
I+ I I + + + V I+V L +I + +
Sbjct: 281 ILIIYGIIQALDGNVLVPLLFSEAVDLNPVFIIVAVLFFGGLWGFWGVFFAIPLASLVKA 340
Query: 212 LFTFPYSFSPDL 223
L T S +L
Sbjct: 341 LITAWSSTQEEL 352
>gi|312144022|ref|YP_003995468.1| DNA internalization-related competence protein ComEC/Rec2
[Halanaerobium sp. 'sapolanicus']
gi|311904673|gb|ADQ15114.1| DNA internalization-related competence protein ComEC/Rec2
[Halanaerobium sp. 'sapolanicus']
Length = 777
Score = 39.8 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 11/130 (8%)
Query: 37 FNFSSYYKGISAIGYF---YSIPKMIYSSESHNTWTWK----KISSIKQSFLNEIRANIG 89
FN + + I A P ++++ +++ ++ + FLN+I A +
Sbjct: 317 FNRKADFLNIIAFSLLINLLINPYLLFTVGLQLSYSLVLTLYYLTPLISEFLNKIFA-VS 375
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+A +F LI N+ AIPI+SF++ I +L +L
Sbjct: 376 IAAQLAAIPLTAYYFGQYAYIALITNLWAIPIISFLLPLILFILVLSTVLP---PLIYFF 432
Query: 150 AWGLDIIIHI 159
L++I++I
Sbjct: 433 GPPLEMILNI 442
>gi|227874735|ref|ZP_03992889.1| possible ComEC operon protein [Mobiluncus mulieris ATCC 35243]
gi|227844681|gb|EEJ54836.1| possible ComEC operon protein [Mobiluncus mulieris ATCC 35243]
Length = 526
Score = 39.8 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 25/231 (10%), Positives = 60/231 (25%), Gaps = 47/231 (20%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ + A + L P A + F+ +I + +
Sbjct: 304 LALARPAKSIAALSLAVMAMLLVNPWQAAS-----WGFALSVVATFSIV------TLGQT 352
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ ++ I ++ + ++ L AN+L +
Sbjct: 353 LSRWLATFLPRFLALP--------LAISLSAQLGCQPLMLILRGKLQLFSLPANLLTGAV 404
Query: 122 LSFVVIPAGLI------------------------AILLMILS-LDNIPFGVMAWGLDII 156
S V + ++ A++ S L + V + I
Sbjct: 405 SSIVTVGGLVLVALAAITHLGITLAQFATFLEPASALIFAPFSPLTEVTAQVTGLAANWI 464
Query: 157 IHIAHRISVAHNE---FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ +A S + + + + FL + +RH +
Sbjct: 465 LGVARFFSRLQGAEIPWIESGYGIFGILVVTLAFLWLAGRYAYLRHWSVSL 515
>gi|139473565|ref|YP_001128281.1| competence protein [Streptococcus pyogenes str. Manfredo]
gi|134271812|emb|CAM30045.1| putative competence protein [Streptococcus pyogenes str. Manfredo]
Length = 747
Score = 39.8 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 29/237 (12%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTALLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + I G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRIITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLTNEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|119944660|ref|YP_942340.1| DNA internalization-related competence protein ComEC/Rec2
[Psychromonas ingrahamii 37]
gi|119863264|gb|ABM02741.1| DNA internalization-related competence protein ComEC/Rec2
[Psychromonas ingrahamii 37]
Length = 798
Score = 39.8 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 41/136 (30%), Gaps = 8/136 (5%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+LS+ +K + L P + Y + I
Sbjct: 319 ILSMKRKCSLIDLLGLTFFMILLWDPLALLS-----LSLWLSYVAVCLILIVLWHFPQF- 372
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + IK F + I S + F + N+LA+P
Sbjct: 373 KNREEKNGEIFGFTKIKHYFKFLLL--IQFSLSLLMLPIQLLSFSSFSMLAPFINLLAVP 430
Query: 121 ILSFVVIPAGLIAILL 136
+ S ++IP L+A++
Sbjct: 431 LFSLLIIPITLLAVVF 446
>gi|300909962|ref|ZP_07127422.1| competence protein ComEC [Lactobacillus reuteri SD2112]
gi|300892610|gb|EFK85970.1| competence protein ComEC [Lactobacillus reuteri SD2112]
Length = 703
Score = 39.8 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 7/132 (5%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI-----GTYGSASASIFLIKHF 104
G+ S+ + ++S + L + ++ + + L+ +
Sbjct: 252 GWALSLLIGLVIDPLLLLTLGGQLSYLLSFILQVLPESVRGFKQSLLLNLISLPSLLSYV 311
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+ + + + L IP+ S VV PA L+ L L ++ GL +I + +S
Sbjct: 312 YEVHLLSFGVSYLIIPLFSTVVFPAVLVGALS--FKLFEPRAYLINAGLKCFQYILNWLS 369
Query: 165 VAHNEFCIGRIP 176
G+ P
Sbjct: 370 DFPGMIHFGKPP 381
>gi|227545003|ref|ZP_03975052.1| competence protein ComEC [Lactobacillus reuteri CF48-3A]
gi|227185020|gb|EEI65091.1| competence protein ComEC [Lactobacillus reuteri CF48-3A]
Length = 704
Score = 39.8 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 7/132 (5%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI-----GTYGSASASIFLIKHF 104
G+ S+ + ++S + L + ++ + + L+ +
Sbjct: 253 GWALSLLIGLVIDPLLLLTLGGQLSYLLSFILQVLPESVRGFKQSLLLNLISLPSLLSYV 312
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+ + + + L IP+ S VV PA L+ L L ++ GL +I + +S
Sbjct: 313 YEVHLLSFGVSYLIIPLFSTVVFPAVLVGALS--FKLFEPRAYLINAGLKCFQYILNWLS 370
Query: 165 VAHNEFCIGRIP 176
G+ P
Sbjct: 371 DFPGMIHFGKPP 382
>gi|120601183|ref|YP_965583.1| ComEC/Rec2-related protein [Desulfovibrio vulgaris DP4]
gi|120561412|gb|ABM27156.1| ComEC/Rec2-related protein [Desulfovibrio vulgaris DP4]
Length = 979
Score = 39.8 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 5/160 (3%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G + G + + I + +T T + + + A + + F
Sbjct: 485 GTLSTGTLSTGTEGISDAGGPDTATLRDGVWQRVRRALMLMALTTLAVQVALLPVQLMGF 544
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL----SLDNIPFGVMAWGLDIIIHIA 160
+ + N+L +P VV+P G + ++ L V A + ++ +
Sbjct: 545 GRASPWFAL-NLLWLPFADLVVLPLGALGLVCEAADLTRPLTGPLLMVAALPCEGLMWLL 603
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
+ A + + L++ F R
Sbjct: 604 EWMEGAGLLAVPAMLRPHWTAALGYGALVVAFASLPGRLF 643
>gi|5616074|gb|AAD45616.1|AF061943_1 prostate derived STE20-like kinase PSK [Homo sapiens]
Length = 1235
Score = 39.8 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 25/228 (10%), Positives = 64/228 (28%), Gaps = 16/228 (7%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1011 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1070
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 1071 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPVP 1130
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKL 342
R + V + + + I + + + +
Sbjct: 1131 GPRRRNPRTTQHPLALLARVWVLCKGWNWRLARASQGLASHLPPWAIHTLASWGLLRGER 1190
Query: 343 CNVSLLITPEILQKQGSLEITII-PPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ G P + + + A+ PW
Sbjct: 1191 PTRIPRLLPRSQRQLGPPASHQPLPGTLAGRRSRTRQSRALP----PW 1234
>gi|148655746|ref|YP_001275951.1| ComEC/Rec2-like protein [Roseiflexus sp. RS-1]
gi|148567856|gb|ABQ90001.1| ComEC/Rec2-related protein [Roseiflexus sp. RS-1]
Length = 546
Score = 39.4 bits (90), Expect = 0.89, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 36/137 (26%), Gaps = 10/137 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F +++ + + +
Sbjct: 366 LWDMGFQLSALATASLFAYGKGTEALLMRTPLRAGWLDW---------AREALTATLAAQ 416
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
A ++ F + + IAN++ +P++ ++ L + MI L +
Sbjct: 417 ILALPLILYAFGNLSLIAPIANVVMLPMVPSAMLFGALALVGGMIWLPLGQLLALPAYLF 476
Query: 153 LDIIIHIAHRISVAHNE 169
L + A
Sbjct: 477 LAWLTEGARLFGQLPWA 493
>gi|322689323|ref|YP_004209057.1| hypothetical protein BLIF_1137 [Bifidobacterium longum subsp.
infantis 157F]
gi|320460659|dbj|BAJ71279.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 446
Score = 39.4 bits (90), Expect = 0.91, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 15/150 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + ++ + +
Sbjct: 255 YGFALSSAAVLGIVLFAERLAGAFE------------RAMPHGIAEMMAMTV--AAQLFT 300
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 301 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCEPWLAGVFAWISSWGTLV 360
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ +A + + + T V IV
Sbjct: 361 MERVALWLGGSTMAVIPWKDGVTGAVLIVA 390
>gi|148745103|gb|AAI42664.1| TAO kinase 2 [Homo sapiens]
gi|153217436|gb|AAI51222.1| TAO kinase 2 [Homo sapiens]
Length = 1235
Score = 39.4 bits (90), Expect = 0.92, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 63/227 (27%), Gaps = 14/227 (6%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1011 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1070
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 1071 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPVP 1130
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKL 342
R + V + + + I + + + +
Sbjct: 1131 GPRRRNPRTTQHPLALLARVWVLCKGWNWRLARASQGLASHLPPWAIHTLASWGLLRGER 1190
Query: 343 CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ G + P + + + PW
Sbjct: 1191 PTRIPRLLPRSQRQLGPPA-SRQPLPGTLAGRRSRTRQSRALP--PW 1234
>gi|111018301|ref|YP_701273.1| ComEC operon protein [Rhodococcus jostii RHA1]
gi|110817831|gb|ABG93115.1| possible ComEC operon protein [Rhodococcus jostii RHA1]
Length = 519
Score = 39.4 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 22/183 (12%), Positives = 55/183 (30%), Gaps = 15/183 (8%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
DF F + + + + + ++ +F G+
Sbjct: 341 DFGFVLSATATAGLIVIAPVWVDVLVGRGWPRAVAETVAVSVAAFAVTAPIVAAMAGT-- 398
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL-MILSLDNIPFGVMAWGLD 154
+ + + ANIL P++ + + + A++ + L + + V W L
Sbjct: 399 -----------VSLVSVCANILVAPVVGVITVAGAITALIAGVSLPVAEVVVRVTQWPLW 447
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ +A R + ++ + R ++ GI I +L
Sbjct: 448 WLVTVAERGARIPGASIPVPSGPAGAAIVIGAVAALGV-ALRRRGPRLVLAGIAIGVLVL 506
Query: 215 FPY 217
+
Sbjct: 507 WAP 509
>gi|117927982|ref|YP_872533.1| ComEC/Rec2-related protein [Acidothermus cellulolyticus 11B]
gi|117648445|gb|ABK52547.1| ComEC/Rec2-related protein [Acidothermus cellulolyticus 11B]
Length = 559
Score = 39.4 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 12/120 (10%), Positives = 35/120 (29%), Gaps = 1/120 (0%)
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ + + + + ++ + V+ + AN+LA +
Sbjct: 390 APPLSRWMGRRIPAWLAAATAVPLAAALGCAPLIVSFTGRVSVFTVPANLLAEAAVGPAT 449
Query: 127 IPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
I L + ++ ++ + II +AH + +++ V
Sbjct: 450 ILGILTGAVAVVWPWAGSVVAHLAGIPCAWIIWVAHFFARLPGATMRWPSGFGGALSLAV 509
>gi|257063737|ref|YP_003143409.1| DNA internalization-related competence protein ComEC/Rec2 [Slackia
heliotrinireducens DSM 20476]
gi|256791390|gb|ACV22060.1| DNA internalization-related competence protein ComEC/Rec2 [Slackia
heliotrinireducens DSM 20476]
Length = 734
Score = 39.4 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 58/192 (30%), Gaps = 18/192 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ P A + + + P F +F I F + +
Sbjct: 271 RRGSPLAALSVCVCLLLAANPYNA-----FSLSFLLSVGSTLGIILFTGLFE-------- 317
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
TW + + + + + F +P+ +AN++A P+ S +
Sbjct: 318 ---TWLGKALGGRFPTVCNTVALTMAANLVIFPVVASVFARLPLLSPVANLIAAPVFSVL 374
Query: 126 VIPA-GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+I +A+ L ++ V A D+ I H ++ + +
Sbjct: 375 LIGGLAALALCAAAPPLGSLALAVCAGAADLFCSIMHALAQVPYASLFSSWSAGASTAVS 434
Query: 185 VEFLLMVFCKTN 196
V + + +
Sbjct: 435 VALMAL-IWRVW 445
>gi|291516780|emb|CBK70396.1| ComEC/Rec2-related protein [Bifidobacterium longum subsp. longum
F8]
Length = 584
Score = 39.4 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 15/150 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + ++ + +
Sbjct: 393 YGFALSSAAVLGIVLFAGRLAGAFE------------RAMPHGIAEMMAMTV--AAQLFT 438
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 439 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCEPWLAGVFAWISSWGTLV 498
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ +A + + + T V IV
Sbjct: 499 MERVALWLGGSTMAVIPWKDGVTGAVLIVA 528
>gi|45505130|ref|NP_057235.2| serine/threonine-protein kinase TAO2 isoform 2 [Homo sapiens]
gi|116242813|sp|Q9UL54|TAOK2_HUMAN RecName: Full=Serine/threonine-protein kinase TAO2; AltName:
Full=Kinase from chicken homolog C; Short=hKFC-C;
AltName: Full=Prostate-derived STE20-like kinase 1;
Short=PSK-1; AltName: Full=Thousand and one amino acid
protein 2
gi|119600369|gb|EAW79963.1| TAO kinase 2, isoform CRA_a [Homo sapiens]
gi|187957506|gb|AAI36654.1| TAO kinase 2 [Homo sapiens]
gi|223460882|gb|AAI36656.1| TAO kinase 2 [Homo sapiens]
Length = 1235
Score = 39.4 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 63/227 (27%), Gaps = 14/227 (6%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1011 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1070
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 1071 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPVP 1130
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKL 342
R + V + + + I + + + +
Sbjct: 1131 GPRRRNPRTTQHPLALLARVWVLCKGWNWRLARASQGLASHLPPWAIHTLASWGLLRGER 1190
Query: 343 CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ G + P + + + PW
Sbjct: 1191 PTRIPRLLPRSQRQLGPPA-SRQPLPGTLAGRRSRTRQSRALP--PW 1234
>gi|293377499|ref|ZP_06623695.1| ComEC/Rec2-like protein [Enterococcus faecium PC4.1]
gi|292643868|gb|EFF61982.1| ComEC/Rec2-like protein [Enterococcus faecium PC4.1]
Length = 462
Score = 39.4 bits (90), Expect = 0.99, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG-SASASIFLI 101
+ + + + P+ ++ + ++ + + + ++ + ++
Sbjct: 252 FAVVFWLLLLFD-PRFLFHAGGQLSFFMSFLFILISFDGDWMKKTASHVLFTMITMPLIV 310
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
HF+ P+ G + +L P+ F+ +P+ L
Sbjct: 311 WHFYEWPLLGSLFTLLVAPVFKFLFLPSVFFLTLFN 346
>gi|56807989|ref|ZP_00365799.1| COG0658: Predicted membrane metal-binding protein [Streptococcus
pyogenes M49 591]
gi|209559638|ref|YP_002286110.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus pyogenes NZ131]
gi|209540839|gb|ACI61415.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus pyogenes NZ131]
Length = 747
Score = 39.4 bits (90), Expect = 0.99, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTALLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLTNEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|332845669|ref|XP_510917.3| PREDICTED: serine/threonine-protein kinase TAO2 isoform 2 [Pan
troglodytes]
Length = 1235
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 63/227 (27%), Gaps = 14/227 (6%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1011 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1070
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 1071 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPVP 1130
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKL 342
R + V + + + I + + + +
Sbjct: 1131 GPRRRNPRTTQHPLALLARVWVLCKGWNWRLARASQGLASHLPPWAIHTLASWGLLRGER 1190
Query: 343 CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ G + P + + + PW
Sbjct: 1191 PTRIPRLLPRSQRQLGPPA-SRQPLPGTLAGRRSRTRQSRALP--PW 1234
>gi|213691902|ref|YP_002322488.1| ComEC/Rec2-related protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|213523363|gb|ACJ52110.1| ComEC/Rec2-related protein [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 584
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 45/158 (28%), Gaps = 15/158 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F ++ ++ S + +
Sbjct: 393 YGFALSSAAVLGIVLFAGRLAGVFE------------RAMPHSIAEMMAMTV--AAQLFT 438
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 439 LPIQVLMEPELPLLSVPANLLVSPFVGLATMVGLMALACAWCTPWLAGVFAWISSWGTLV 498
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ +A + + + T V IV + +
Sbjct: 499 MERVALWLGGSTMAVIPWKDGVTGAVLIVTAEIGIGML 536
>gi|313140333|ref|ZP_07802526.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313132843|gb|EFR50460.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 567
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 17/188 (9%), Positives = 50/188 (26%), Gaps = 31/188 (16%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQS 79
I L PS + F+ + I F ++ +
Sbjct: 311 IVLLIAPSMSVS-----YGFALSCAAVLGIVLFAGP-------------LTDWLACMLPR 352
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
L+ A + + +P+ + AN+L P++ F + + + ++
Sbjct: 353 LLSAPLAMT-IAAQSLTLPIQVLMDPQLPLASVPANLLVGPVVGFATMAGLVALFISWLM 411
Query: 140 S-LDNIPFGVMAWGLDIIIHIAH-----------RISVAHNEFCIGRIPETSFVTIVVEF 187
+ + G ++ +A + + +++
Sbjct: 412 PQCGYVLAWIAGCGTSVMERVAAMVSDNEFATMPWAGGIPGALLMVLVESACATVLILAT 471
Query: 188 LLMVFCKT 195
+ ++
Sbjct: 472 RWLRLLRS 479
>gi|312132628|ref|YP_003999967.1| comec [Bifidobacterium longum subsp. longum BBMN68]
gi|311773577|gb|ADQ03065.1| ComEC [Bifidobacterium longum subsp. longum BBMN68]
Length = 584
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 15/150 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + ++ + +
Sbjct: 393 YGFALSSAAVLGIVLFAGRLAGAFE------------RAMPHGIAEMMAMTV--AAQLFT 438
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 439 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCEPWLAGVFAWISSWGTLV 498
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ +A + + + T V IV
Sbjct: 499 MERVALWLGGSTMAVIPWKDGVTGAVLIVA 528
>gi|239621302|ref|ZP_04664333.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239515763|gb|EEQ55630.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 584
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 15/150 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + ++ + +
Sbjct: 393 YGFALSSAAVLGIVLFAGRLAGAFE------------RAMPHGIAEMMAMTV--AAQLFT 438
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 439 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCEPWLAGVFAWISSWGTLV 498
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ +A + + + T V IV
Sbjct: 499 MERVALWLGGSTMAVIPWKDGVTGAVLIVA 528
>gi|134098022|ref|YP_001103683.1| competence protein [Saccharopolyspora erythraea NRRL 2338]
gi|291007213|ref|ZP_06565186.1| competence protein [Saccharopolyspora erythraea NRRL 2338]
gi|133910645|emb|CAM00758.1| competence protein [Saccharopolyspora erythraea NRRL 2338]
Length = 707
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 50/171 (29%), Gaps = 23/171 (13%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+L + P A + I + + +G A F+ + + +
Sbjct: 239 VLGRERSALPALAGSVIALLLLMPQLAGTA-------GFALSVAATAGLVLLAPVWAGAL 291
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ + + + + ++AN+LA P
Sbjct: 292 HARGVP-------------VGVAEALAVPAAAHLVTAPLVAAISGEVSAVAVVANLLAGP 338
Query: 121 ILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+++ + G++A L +S L + A L +I +A +
Sbjct: 339 VIAPATV-FGVLATLAAPVSGWLSEAFVWLSAPELLWVIAVAEHAAAMPGA 388
>gi|307706454|ref|ZP_07643263.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus mitis SK321]
gi|307618164|gb|EFN97322.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus mitis SK321]
Length = 746
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 68/208 (32%), Gaps = 11/208 (5%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGSASA 96
F+ F +P ++ + + I ++ ++A S
Sbjct: 310 FALTVL-----VLFIIMPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAVARESLVISLGI 364
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
L +F + ++ + + V +P + L L + W L+ +
Sbjct: 365 LPILSFYFAEFQPWSILLTFVFSFLFDLVFLPLLSVLFALSFLYPVIQLNFIFEW-LEGM 423
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT-F 215
I + +++ G+ + +++ L+ + NI+ + + + IT + T +
Sbjct: 424 IRLVSQVASRP--LVFGQPNAWLLILLLISLALVYDLRKNIKRLAVLSLLITGLFFLTKY 481
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISN 243
P +L +G + L D
Sbjct: 482 PLENEITMLDVGQGESIFLRDVAGKTIL 509
>gi|307708590|ref|ZP_07645054.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus mitis NCTC 12261]
gi|307615339|gb|EFN94548.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus mitis NCTC 12261]
Length = 746
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 67/208 (32%), Gaps = 11/208 (5%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGSASA 96
F+ F +P ++ + + I ++ ++A S
Sbjct: 310 FALTVL-----VLFIVMPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAVARESLVISLGI 364
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
L +F + ++ + + V +P I L L + W L+ +
Sbjct: 365 LPILSFYFAEFQPWSILLTFVFSFLFDLVFLPLLSILFALSFLHPVIQLNFIFEW-LEGM 423
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT-F 215
I +++ G+ + +++ L+ + NI+ + + + IT + T
Sbjct: 424 IRFVSQVASRP--LVFGQPNAWILILLLISLALVYDLRKNIKRLAVLSLLITGLFFLTKH 481
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISN 243
P +L +G + L D I
Sbjct: 482 PLENEITMLDVGQGESIFLRDVTGKIIL 509
>gi|163840679|ref|YP_001625084.1| putative DNA uptake protein [Renibacterium salmoninarum ATCC 33209]
gi|162954155|gb|ABY23670.1| putative DNA uptake protein [Renibacterium salmoninarum ATCC 33209]
Length = 592
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 3/131 (2%)
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL-- 122
++ + ++ S ++ + Y L ANILA P++
Sbjct: 400 SLGVPSQRWLAAILPGSLASAISVPLSAQLFCSPAIVLLQPQLASYTLPANILAAPVVAA 459
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+ L +++ + L ++ V + +A S V
Sbjct: 460 GTIFGMLALCSVIFVPW-LASVLLIVAGLTAGWVSTVARFFSELPGAALPWPPGWGGVVA 518
Query: 183 IVVEFLLMVFC 193
+ L +VF
Sbjct: 519 MAAFSLSVVFL 529
>gi|86146938|ref|ZP_01065256.1| Rec2-related protein [Vibrio sp. MED222]
gi|85835188|gb|EAQ53328.1| Rec2-related protein [Vibrio sp. MED222]
Length = 409
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 50/145 (34%), Gaps = 23/145 (15%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA----ILLMIL--------- 139
+ + F + F+ + + + N+L +P +S VVIP +A ++L +
Sbjct: 3 TFLIAPFSMLFFNGVSLVSVFYNLLLLPWVSMVVIPLLFLAMFFSLILAPVSGGVGLTTF 62
Query: 140 --SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
L + ++ L+ ++ + I + F+ + F+
Sbjct: 63 NNGLSEQLWMLVDLSLEPLVFSLPFSERFWFQVDNHTIELSVFLILFFGFVS-------- 114
Query: 198 RHIGSIMIGITIIILFTFPYSFSPD 222
R+ + + I + + P
Sbjct: 115 RYFKRALSILIITVFVLWWEFGKPQ 139
>gi|323466775|gb|ADX70462.1| Integral membrane protein-like protein [Lactobacillus helveticus
H10]
Length = 762
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G++ I + +P++ + + ++ K + F + + + + L+ +F
Sbjct: 320 GLACILHIIFVPRLFMMAGAILSYLLAKGLQLTNKFG---KMSQSILLNVLLTPLLLFYF 376
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDII 156
+ + ++ N++ +P ++VV+P +LL + L V+ G I
Sbjct: 377 YQVNFLTVLFNLMVVPYFNWVVMPIAFANVLLFGFTKKLAPFFEQVLELGEKAI 430
>gi|325103289|ref|YP_004272943.1| MscS Mechanosensitive ion channel [Pedobacter saltans DSM 12145]
gi|324972137|gb|ADY51121.1| MscS Mechanosensitive ion channel [Pedobacter saltans DSM 12145]
Length = 784
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLF--DFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
P P +T+ + L+P P P L+ F I I ++ ++P+ + +
Sbjct: 306 PIPILSTLIVLINLTPLFEPDSPSLYIEIMAFLLIV--ILTIAFWRNLPRSEFKNWLIIV 363
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ I+ + + I +S+++ F+ Y IA + P+L ++
Sbjct: 364 TLYILITFAAATVRDSFLIRICLIILNLSSLYIGSKFYLKLQYVQIAKRMLKPVLLMFLV 423
Query: 128 PAGLIAILLMILS 140
L++++ +
Sbjct: 424 -FNLLSVIFNVFG 435
>gi|260101774|ref|ZP_05752011.1| competence protein ComEC [Lactobacillus helveticus DSM 20075]
gi|260084418|gb|EEW68538.1| competence protein ComEC [Lactobacillus helveticus DSM 20075]
Length = 762
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G++ I + +P++ + + ++ K + F + + + + L+ +F
Sbjct: 320 GLACILHIIFVPRLFMMAGAILSYLLAKGLQLTNKFG---KMSQSILLNVLLTPLLLFYF 376
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDII 156
+ + ++ N++ +P ++VV+P +LL + L V+ G I
Sbjct: 377 YQVNFLTVLFNLMVVPYFNWVVMPIAFANVLLFGFTKKLAPFFEQVLELGEKAI 430
>gi|111610193|gb|ABH11585.1| integral membrane protein-like protein [Lactobacillus helveticus
CNRZ32]
Length = 762
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G++ I + +P++ + + ++ K + F + + + + L+ +F
Sbjct: 320 GLACILHIIFVPRLFMMAGAILSYLLAKGLQLTNKFG---KMSQSILLNVLLTPLLLFYF 376
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDII 156
+ + ++ N++ +P ++VV+P +LL + L V+ G I
Sbjct: 377 YQVNFLTVLFNLMVVPYFNWVVMPIAFANVLLFGFTKKLAPFFEQVLELGEKAI 430
>gi|317133023|ref|YP_004092337.1| ComEC/Rec2-related protein [Ethanoligenens harbinense YUAN-3]
gi|315471002|gb|ADU27606.1| ComEC/Rec2-related protein [Ethanoligenens harbinense YUAN-3]
Length = 739
Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 28/318 (8%), Positives = 86/318 (27%), Gaps = 29/318 (9%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
++ + L P GL +F++ + G +
Sbjct: 317 SLGASVLVLCLL-NPFAATDTGLL-LSFAATLGLVLVSGRCTRWINVGMKRLPERAGRLL 374
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
++ + ++ F I + +N+L +P+ + + +
Sbjct: 375 RMP--------AAVLCETAGATLCTLPVILVTFRQISLVTFFSNVLEVPVSLLATLLSAM 426
Query: 132 IAILLMILSLDN---IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
+++L + ++ + +I AH ++ + ++
Sbjct: 427 VSLLPDGWAFGWLVTPAALLLRFCCATMIGYAHLLADLPFASVSTDYGFIYPILLLAAAA 486
Query: 189 LMVFCKTNIR---HIGSIMIGITIIIL------FTFPYSFSPDLLISEKGNLVALVDKNT 239
+ + R + + + + L + GN L++
Sbjct: 487 AFLLWRMRGRGADWRAAALCVAFALSVGMASHAAAAWGVLEFAALPASDGNCTVLLNGGH 546
Query: 240 LISNYSNP--PSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI 297
+ +++ S+W +A + D + +N S + P + + +
Sbjct: 547 AVVVDLAGYDAAYLTSRWLKTHNVAQVDALILPVWDQKRENNLSELTV-----PVRAVYL 601
Query: 298 KKSFCVGCHRSDVIVGVL 315
++ V
Sbjct: 602 PGAYRAQAPGGGHPVASA 619
>gi|310799786|gb|EFQ34679.1| alpha-1,3-glucan synthase [Glomerella graminicola M1.001]
Length = 2402
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/188 (12%), Positives = 50/188 (26%), Gaps = 6/188 (3%)
Query: 40 SSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIF 99
+ + AI Y +P W + + + I Y S
Sbjct: 2154 ALLLWAVGAILY-LGLPDFYREMPGPIPQLWLTLLKRRTIAWYLMAVCIQNY-FLSTLFG 2211
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
F + + +++ + + F+ + A ++ L F + A GL
Sbjct: 2212 RNWFFLFSSQHVPVWSMVILALFFFIFVWAIVLWGLAKASESHPWLFPMFAVGLGA---- 2267
Query: 160 AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ IG + + L + G GI +I++ T
Sbjct: 2268 PRWAQIWWGTSRIGVYMPWAGGVVAGAVLSRILWLWLGVLDGLQGAGIGMILMLTLTRVH 2327
Query: 220 SPDLLISE 227
+
Sbjct: 2328 VAAACVGA 2335
>gi|266624976|ref|ZP_06117911.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium hathewayi DSM 13479]
gi|288863130|gb|EFC95428.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium hathewayi DSM 13479]
Length = 812
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 16/95 (16%)
Query: 40 SSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIF 99
+ + A+G + + + + ++
Sbjct: 354 QLSFGAVFAVG----------------SVLPVIQNYLGKKRGALGALSVSAAIQLVTLPV 397
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+++ F +PVYG+ N+L IP++ VV A+
Sbjct: 398 ILRDFFQLPVYGIFLNLLVIPLMGGVVCSGIGAAL 432
>gi|94990727|ref|YP_598827.1| COME operon protein 3 [Streptococcus pyogenes MGAS10270]
gi|94544235|gb|ABF34283.1| COME operon protein 3 [Streptococcus pyogenes MGAS10270]
Length = 747
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTALLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLTNEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|94994650|ref|YP_602748.1| COME operon protein 3 [Streptococcus pyogenes MGAS10750]
gi|94548158|gb|ABF38204.1| COME operon protein 3 [Streptococcus pyogenes MGAS10750]
Length = 747
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTALLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLTNEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|329942680|ref|ZP_08291459.1| comEC/Rec2-related domain protein [Chlamydophila psittaci Cal10]
gi|332287275|ref|YP_004422176.1| conserved hypothetical protein [Chlamydophila psittaci 6BC]
gi|325507009|gb|ADZ18647.1| conserved hypothetical protein [Chlamydophila psittaci 6BC]
gi|328814940|gb|EGF84929.1| comEC/Rec2-related domain protein [Chlamydophila psittaci Cal10]
gi|328914521|gb|AEB55354.1| Competence protein family [Chlamydophila psittaci 6BC]
Length = 486
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 39/115 (33%), Gaps = 4/115 (3%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F+ + + I F+S + + K + + + ++G
Sbjct: 322 AFALSFLATAGILLFFSHLFRFFYTP-WKQIAPKYLLPFLRYIWGAL--SLGLSSQIFLL 378
Query: 98 IFLIKHFHCIPVYGLIANILA-IPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
+ F +P+ GLI N+ + +L + +A+ ++ + ++
Sbjct: 379 FPTVNFFGSLPLDGLIFNLFFPLCVLPIFFLILFSLALPCLVPITEFCISWLIGQ 433
>gi|328468543|gb|EGF39545.1| competence protein ComEC [Lactobacillus helveticus MTCC 5463]
Length = 695
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G++ I + +P++ + + ++ K + F + + + + L+ +F
Sbjct: 253 GLACILHIIFVPRLFMMAGAILSYLLAKGLQLTNKFG---KMSQSILLNVLLTPLLLFYF 309
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDII 156
+ + ++ N++ +P ++VV+P +LL + L V+ G I
Sbjct: 310 YQVNFLTVLFNLMVVPYFNWVVMPIAFANVLLFGFTKKLAPFFEQVLELGEKAI 363
>gi|313847860|emb|CBY16854.1| membrane protein [Chlamydophila psittaci RD1]
Length = 487
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 39/115 (33%), Gaps = 4/115 (3%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F+ + + I F+S + + K + + + ++G
Sbjct: 323 AFALSFLATAGILLFFSHLFRFFYTP-WKQIAPKYLLPFLRYIWGAL--SLGLSSQIFLL 379
Query: 98 IFLIKHFHCIPVYGLIANILA-IPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
+ F +P+ GLI N+ + +L + +A+ ++ + ++
Sbjct: 380 FPTVNFFGSLPLDGLIFNLFFPLCVLPIFFLILFSLALPCLVPITEFCISWLIGQ 434
>gi|219841904|gb|AAI44345.1| TAOK2 protein [Homo sapiens]
Length = 1122
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 63/227 (27%), Gaps = 14/227 (6%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 898 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 957
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 958 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPVP 1017
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKL 342
R + V + + + I + + + +
Sbjct: 1018 GPRRRNPRTTQHPLALLARVWVLCKGWNWRLARASQGLASHLPPWAIHTLASWGLLRGER 1077
Query: 343 CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ G + P + + + PW
Sbjct: 1078 PTRIPRLLPRSQRQLGPPA-SRQPLPGTLAGRRSRTRQSRALP--PW 1121
>gi|332202811|gb|EGJ16880.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus pneumoniae GA41317]
Length = 729
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 41/137 (29%), Gaps = 8/137 (5%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG--TYGSASA 96
F+ F +P ++ + + I ++ ++A S
Sbjct: 293 FALT-----VFLLFIVMPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAVASESLVISLGI 347
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
L +F + ++ + + +P I +L L + W L+ I
Sbjct: 348 LPILSFYFAEFQPWSILLTFVFSFLFDLTFLPLLSILFVLSFLYPVIQLNFIFEW-LEGI 406
Query: 157 IHIAHRISVAHNEFCIG 173
I + +++ F
Sbjct: 407 IRLVSQVASRPLVFGQP 423
>gi|116335071|ref|YP_802566.1| cytochrome O ubiquinol oxidase subunit I [Candidatus Carsonella
ruddii PV]
gi|116235352|dbj|BAF35200.1| cytochrome O ubiquinol oxidase subunit I [Candidatus Carsonella
ruddii PV]
Length = 606
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 18/150 (12%)
Query: 29 PAFPGLFDFNFSSYYKGISAIGY-----------FYSIPKMIYSSESHNTWTWKKISSIK 77
AFP L +F + + I + P + + S SI+
Sbjct: 131 VAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSPWVGVDYWNWSIQ 190
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG---LIANILAI---PILSFVVIPAGL 131
S + I ++I + F+ I ++ L +NIL + PIL+ ++ L
Sbjct: 191 ISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISFPILTILLFQIFL 250
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
L M +++I H
Sbjct: 251 DRTLSTHFYSSFYGGQQM-LYINLIWAWGH 279
>gi|227503086|ref|ZP_03933135.1| membrane metal-binding protein ComEC [Corynebacterium accolens ATCC
49725]
gi|227076147|gb|EEI14110.1| membrane metal-binding protein ComEC [Corynebacterium accolens ATCC
49725]
Length = 467
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/178 (11%), Positives = 47/178 (26%), Gaps = 17/178 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F F+ I + + + +
Sbjct: 304 FGFALSCAATFGIVMLSPLIYSHLAVTGWPAIFLR-------------AIAVAIAADILT 350
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP---FGVMAWGL 153
+ + V ++AN+L P + + + L AI + L I ++
Sbjct: 351 LPLIALMSGEVSVVSVLANVLVAPATAPITVVGLLAAIAAQLGPLSIIAAGLLKLIEPAA 410
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
I IAH ++ I P + + +++ + + G I +
Sbjct: 411 WWINTIAHGVASLP-VVTITAHPLFTLLAYGWVIAGLLYHRPWLTLAGVIACLGLLAA 467
>gi|308180940|ref|YP_003925068.1| ComE operon protein 3 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308046431|gb|ADN98974.1| ComE operon protein 3 [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 763
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 32/275 (11%), Positives = 83/275 (30%), Gaps = 14/275 (5%)
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
P ++ ++ + + A S + +H ++ L
Sbjct: 323 NPLVLSQLGGQLSYGLALLLILMPGLPPWRLAIWIQVISLPVLLVATAQWH---LWSLAV 379
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNI-PFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N++ PI S+V++P ++ + + V W L + +S IG
Sbjct: 380 NLVVAPIFSWVLLPVTVVGA---SIGFGSTNVTSVCEWVLVNFQNWLEWVSHWPGLLIIG 436
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIR--HIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
+ ++ + L + +T R + ++ + FP + + +G+
Sbjct: 437 Q--PSTLWAWTLSLLSLWLLRTPRRRYYWRLLLAYACFSLSLRFPLHGAVQFIDVGQGDS 494
Query: 232 VALVDKNTLISNYSNPPS---FIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRS 288
+ + + + F +W++ + P A + L + L + S
Sbjct: 495 ILIRQPFNRQVSLIDTGGQLHFSRPRWQAEQVQPRSRAETITVNYLHRLGITHLDTVYLS 554
Query: 289 MQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
+ + + V+V +
Sbjct: 555 HKDVDHIGDLGELLRLMPVNQVVVPAGMARLAKFQ 589
>gi|311064461|ref|YP_003971186.1| hypothetical protein BBPR_1083 [Bifidobacterium bifidum PRL2010]
gi|310866780|gb|ADP36149.1| Conserved hypothetical protein [Bifidobacterium bifidum PRL2010]
Length = 689
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 18/188 (9%), Positives = 50/188 (26%), Gaps = 31/188 (16%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQS 79
I L PS + F+ + I F ++ +
Sbjct: 433 IVLLIAPSMSVS-----YGFALSCAAVLGIVLFAGP-------------LTDWLACMLPR 474
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
L+ A + I +P+ + AN+L P++ F + + + ++
Sbjct: 475 LLSAPLAMT-IAAQSLTLPIQILMDPQLPLASVPANLLVGPVVGFATMAGLVALFISWLM 533
Query: 140 S-LDNIPFGVMAWGLDIIIHIAH-----------RISVAHNEFCIGRIPETSFVTIVVEF 187
+ + G ++ +A + + +++
Sbjct: 534 PQCGYVLAWIAGCGTSVMERVAAMVSDNEFATMPWAGGIPGALLMVLVESACATVLILAT 593
Query: 188 LLMVFCKT 195
+ ++
Sbjct: 594 RWLRLLRS 601
>gi|226198976|ref|ZP_03794539.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei Pakistan 9]
gi|225929076|gb|EEH25100.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia pseudomallei Pakistan 9]
Length = 405
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 48/159 (30%), Gaps = 7/159 (4%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
A + + + + F IP+ G +AN AIP + +V P L I+L LD
Sbjct: 4 AARAQFAVTIALAPLGVLWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDAS 62
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ + + ++ + + A + P+ + +
Sbjct: 63 AYALAHTLVQALMRLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------P 116
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ + + + +P L AL
Sbjct: 117 VRCAAPLAWLPLVAPAPLAPPDGAFRLTALDVGQGSAVL 155
>gi|168208746|ref|ZP_02634371.1| competence family protein [Clostridium perfringens B str. ATCC
3626]
gi|170713204|gb|EDT25386.1| competence family protein [Clostridium perfringens B str. ATCC
3626]
Length = 551
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 40/256 (15%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YDP + + I + P LF F + G I FY
Sbjct: 264 RLFKTYDPLSSISLGAVILLIYKPYN-----LFSMGFLLSFGGTLGIILFYKK------- 311
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + ++G A L+ F + LI+ L PI+
Sbjct: 312 ------LLEGFYMLPPKLNE--YLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVTPII 363
Query: 123 SFVVIP--------AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++ LI +++ ++++ + F + LD ++ + F I
Sbjct: 364 VILLQILLISILIGGNLIGVIVFLINIIFMVFRGILVFLDKVVWVTPY---LSPVFAIAY 420
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-----LLISEKG 229
+ ++ + ++ F K I I + + + +F D ++I
Sbjct: 421 MTMFLWIYMSLKG----FKKFKIGVYLVIPVLLLNLYVFGAKIRVVEDKWNKAIVIESGF 476
Query: 230 NLVALVDKNTLISNYS 245
VALV+ N+ S
Sbjct: 477 KKVALVNNNSDYFKKS 492
>gi|320458002|dbj|BAJ68623.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 418
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 45/158 (28%), Gaps = 15/158 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F ++ ++ S + +
Sbjct: 227 YGFALSSAAVLGIVLFAGRLAGVFE------------RAMPHSIAEMMAMTV--AAQLFT 272
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 273 LPIQVLMEPELPLLSVPANLLVSPFVGLATMVGLMALACAWCTPWLAGVFAWISSWGTLV 332
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ +A + + + T V IV + +
Sbjct: 333 MERVALWLGGSTMAVIPWKDGVTGAVLIVTAEIGIGML 370
>gi|148980814|ref|ZP_01816224.1| Rec2-related protein [Vibrionales bacterium SWAT-3]
gi|145961049|gb|EDK26370.1| Rec2-related protein [Vibrionales bacterium SWAT-3]
Length = 767
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 13/91 (14%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + A+ Y + S N+ +++ + + I + +
Sbjct: 328 SFWLSFGTLGAVLYI----AFNSDASSSNSTFIERVLKLIK---------IQVMLTLLIA 374
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
F + F + + ++ N+L +P +S V IP
Sbjct: 375 PFSMLFFKGVSLISVVYNLLLLPWVSMVTIP 405
>gi|30353923|gb|AAH51798.1| TAOK2 protein [Homo sapiens]
Length = 1426
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 63/227 (27%), Gaps = 14/227 (6%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1202 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1261
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 1262 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPVP 1321
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKL 342
R + V + + + I + + + +
Sbjct: 1322 GPRRRNPRTTQHPLALLARVWVLCKGWNWRLARASQGLASHLPPWAIHTLASWGLLRGER 1381
Query: 343 CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ G + P + + + PW
Sbjct: 1382 PTRIPRLLPRSQRQLGPPA-SRQPLPGTLAGRRSRTRQSRALP--PW 1425
>gi|110803317|ref|YP_699325.1| comC competence related protein [Clostridium perfringens SM101]
gi|110683818|gb|ABG87188.1| competence family protein [Clostridium perfringens SM101]
Length = 551
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 40/256 (15%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YDP + + I + P LF F + G I FY
Sbjct: 264 RLFKTYDPLSSISLGAVILLIYKPYN-----LFSMGFLLSFGGTLGIILFYKK------- 311
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + ++G A L+ F + LI+ L PI+
Sbjct: 312 ------LLEGFYMLPPKLNE--YLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVTPII 363
Query: 123 SFVVIP--------AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++ LI +++ ++++ + F + LD ++ + F I
Sbjct: 364 VILLQILLISILIGGNLIGVIVFLINIIFMVFRGILVFLDKVVWVTPY---LSPVFAIAY 420
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-----LLISEKG 229
+ ++ + ++ F K I I + + + +F D ++I
Sbjct: 421 MTMFLWIYMSLKG----FKKFKIGVYLVIPVLLLNLYVFGAKIRVVEDKWNKAIVIESGF 476
Query: 230 NLVALVDKNTLISNYS 245
VALV+ N+ S
Sbjct: 477 KKVALVNNNSDYFKKS 492
>gi|227512165|ref|ZP_03942214.1| competence protein EC [Lactobacillus buchneri ATCC 11577]
gi|227084559|gb|EEI19871.1| competence protein EC [Lactobacillus buchneri ATCC 11577]
Length = 739
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 82/261 (31%), Gaps = 49/261 (18%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
K A + + P +F + Y + F
Sbjct: 290 KMSQLSALSLTLIVNLFLLPEA-----MFMMSVQLSYGLAFGLIAF-------------- 330
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
K++ ++Q+ L + + L+ H + V L N++ +P+ +
Sbjct: 331 ----SKMAYLRQTVLLNLLSL----------PILLFHLYEWHVLSLAVNLMVLPLFGRTI 376
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI----AHRISVAHNEFCIGRIPETSFVT 182
P + +L L +A ++ ++ + + G+ +
Sbjct: 377 FPLVIFGLL---FGL---VSSKLAIPVEWVLMAFNRSLNMVGRLPGMIVFGKPQLVVVLL 430
Query: 183 IVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALVDK-- 237
++ L+++ K +R I+ G+ ++ + ++ + + +G+ +
Sbjct: 431 MLGLTLIIMIHSKKRVRGYKIILAGLYLVTFIWIHFPIHGEVSMFDVGQGDSFLIRTPFN 490
Query: 238 -NTLISNYSNPPSFIFSQWKS 257
+ I + +F QW+
Sbjct: 491 QSVTIIDTGGKVTFNQQQWQR 511
>gi|262283171|ref|ZP_06060938.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
gi|262261423|gb|EEY80122.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
Length = 746
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 13/130 (10%), Positives = 32/130 (24%), Gaps = 20/130 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F G+ + Y + I + + S S
Sbjct: 323 SFLLTTGGVLSCAYAFIITMLDFEDFS----------------GFRKAVLESLSISLGIL 366
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
LI +F + ++ L + ++P + L+ L +
Sbjct: 367 PILIYYFAEFQSWSILLTFLFSIVFDTFMLPLLSLIFLISPLFAFTQVNVFFQ----WLE 422
Query: 158 HIAHRISVAH 167
+ ++
Sbjct: 423 MVVRWVASLS 432
>gi|114563559|ref|YP_751072.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella frigidimarina NCIMB 400]
gi|114334852|gb|ABI72234.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella frigidimarina NCIMB 400]
Length = 831
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 26/197 (13%), Positives = 53/197 (26%), Gaps = 37/197 (18%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ L P GL + + I P + + +
Sbjct: 311 WDRLAYALFFVMLVDPFASLGAGL-----WLSFGAL-VIILLSVKPDSVDQPSNLDPVLV 364
Query: 71 KKISSIKQSF------------------LNEIRANIGTYGSASASIFLIKHFHCIPVYGL 112
+ + + I +I + I F I + +
Sbjct: 365 NRSIDVPELTLTDRCIEKVMLLKDNILHGLGILWSIQWRLALLLGILQGILFGGIAPHSI 424
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
N+L +P S VVIP L++ + +L+L I+ + + + F +
Sbjct: 425 WLNMLLVPWFSLVVIPLTLLSFCIWLLAL-------------WILWVLGIDTASLQSFSL 471
Query: 173 GRIPETSFVTIVVEFLL 189
+ +LL
Sbjct: 472 MIFQWANLSLEPFAWLL 488
>gi|308233990|ref|ZP_07664727.1| DNA internalization-related competence protein ComEC/Rec2
[Atopobium vaginae DSM 15829]
gi|328944001|ref|ZP_08241466.1| hypothetical protein HMPREF0091_10691 [Atopobium vaginae DSM 15829]
gi|327491970|gb|EGF23744.1| hypothetical protein HMPREF0091_10691 [Atopobium vaginae DSM 15829]
Length = 564
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 23/205 (11%), Positives = 62/205 (30%), Gaps = 24/205 (11%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF------------YSIPKM 58
+ + I + P D +F + + F + +
Sbjct: 357 ISSVSCTALIMIVVNPWCA-----CDVSFILSVSCVIGLALFGNYGNFLVEWMYVKLLRT 411
Query: 59 IYSSESHNTWTWKK-ISSIKQSFLNEIR------ANIGTYGSASASIFLIKHFHCIPVYG 111
+ S + K+ + + + A++ S F I F +
Sbjct: 412 LSYLRSQSEGHLKRVLELLIHGIQTKALTSALQVASMSLCAQVSTLPFSIGFFQGVSFIA 471
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
+++N++ +P + + + A L + + + N+ V ++ I+ + S + +
Sbjct: 472 VLSNVILVPCMVYTALLAVLTIVCAPCVLVANLLLCVGSYATSAILLVLKLFSKFPSAYV 531
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTN 196
FL+++ K
Sbjct: 532 STDGHSAGAALSAAVFLVVIAYKWP 556
>gi|298530977|ref|ZP_07018378.1| protein of unknown function UPF0118 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509000|gb|EFI32905.1| protein of unknown function UPF0118 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 364
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 15/165 (9%), Positives = 42/165 (25%), Gaps = 9/165 (5%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ + + + N IR + F + F + L++ + +
Sbjct: 188 RFLPRERSLAVQVWEDVNRQISNYIRGKTWEIIIVWGATFAVFSFFGLQYSVLLSLAVGL 247
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-- 177
+L IP A++ + ++L I+ I +
Sbjct: 248 SVL----IPYIGAAVVTVPIALVAYFQWGFGSEFVWILVAYAIIQALDGNVLAPLLLGEV 303
Query: 178 ---TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ F+ + + ++ +P +
Sbjct: 304 VNIHPVGIVAAIFVFGGLWGFWGVFFAIPLATLVQAVIRAWPRAE 348
>gi|224283183|ref|ZP_03646505.1| Putative hydrolase [Bifidobacterium bifidum NCIMB 41171]
Length = 637
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 17/188 (9%), Positives = 50/188 (26%), Gaps = 31/188 (16%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQS 79
I L PS + F+ + I F ++ +
Sbjct: 381 IVLLIAPSMSVS-----YGFALSCAAVLGIVLFAGP-------------LTDWLACMLPR 422
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
L+ A + + +P+ + AN+L P++ F + + + ++
Sbjct: 423 LLSAPLAMT-IAAQSLTLPIQVLMDPQLPLASVPANLLVGPVVGFATMAGLVALFISWLM 481
Query: 140 S-LDNIPFGVMAWGLDIIIHIAH-----------RISVAHNEFCIGRIPETSFVTIVVEF 187
+ + G ++ +A + + +++
Sbjct: 482 PQCGYVLAWIAGCGTSVMERVAAMVSDNEFATMPWAGGIPGALLMVLVESACATVLILAT 541
Query: 188 LLMVFCKT 195
+ ++
Sbjct: 542 RWLRLLRS 549
>gi|306827081|ref|ZP_07460378.1| probable competence protein [Streptococcus pyogenes ATCC 10782]
gi|304430715|gb|EFM33727.1| probable competence protein [Streptococcus pyogenes ATCC 10782]
Length = 747
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTALLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLINEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|148750821|gb|ABR10034.1| hypothetical protein [Rickettsia rickettsii]
gi|148750823|gb|ABR10035.1| hypothetical protein [Rickettsia rickettsii]
gi|148750825|gb|ABR10036.1| hypothetical protein [Rickettsia rickettsii]
Length = 53
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
S + +I F Y + N++ +PI SF ++P L
Sbjct: 11 SFLASIITAPVVINQFFIFATYSVPTNLIVVPITSFFLMPLAL 53
>gi|229828447|ref|ZP_04454516.1| hypothetical protein GCWU000342_00508 [Shuttleworthia satelles DSM
14600]
gi|229793041|gb|EEP29155.1| hypothetical protein GCWU000342_00508 [Shuttleworthia satelles DSM
14600]
Length = 886
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 37/287 (12%), Positives = 80/287 (27%), Gaps = 63/287 (21%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYK--GIS------------------AIGYFYSIPKMI 59
+ + P PG F +F++ ++ F + +
Sbjct: 362 VILIPNPMAIGDPG-FQLSFAAILGMQLVARPMQERYRSDCKEKFKARQHQLFRMRQRQL 420
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ + + ++ Q L +I +G + L + I +Y + N+L +
Sbjct: 421 PWNRGRDRVSGSYQPNLTQRILGQIILALGI--QLAVLPLLAFCYSEIALYVIFLNLLLL 478
Query: 120 PILSFVVIPAGL---------IAILLMI----LSLDNIPFGVMAWGLDIIIHIAHRISVA 166
P L V+ L + L L + + W D+ +H
Sbjct: 479 PFLGLVLASGLLGGFLGLAAELGFLKAPADLCLGVSHCLLYFFEWSSDLSLH-------L 531
Query: 167 HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI------------------GSIMIGIT 208
I P + + L + R G I G+
Sbjct: 532 PGARMITGKPPIWLILVYYGSLFYLLYGREKRWAVYPGQRRAKSQTKKRRIQGRISAGVA 591
Query: 209 IIILFTFPYSFSPDL--LISEKGNLVALVDKNTLISNYSNPPSFIFS 253
+ +L + P +S L L + ++ + + L ++
Sbjct: 592 LALLLSPPILWSASLPYLAGAEFTMLDVGQGDGLYFCDGRGGHYMID 638
>gi|6808064|emb|CAB70882.1| hypothetical protein [Homo sapiens]
gi|119600371|gb|EAW79965.1| TAO kinase 2, isoform CRA_c [Homo sapiens]
Length = 1062
Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 63/227 (27%), Gaps = 14/227 (6%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 838 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 897
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 898 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPVP 957
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKL 342
R + V + + + I + + + +
Sbjct: 958 GPRRRNPRTTQHPLALLARVWVLCKGWNWRLARASQGLASHLPPWAIHTLASWGLLRGER 1017
Query: 343 CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ G + P + + + PW
Sbjct: 1018 PTRIPRLLPRSQRQLGPPA-SRQPLPGTLAGRRSRTRQSRALP--PW 1061
>gi|190573627|ref|YP_001971472.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
gi|190011549|emb|CAQ45168.1| putative transmembrane protein [Stenotrophomonas maltophilia K279a]
Length = 799
Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 64/241 (26%), Gaps = 40/241 (16%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ L P G F + G+ + + +
Sbjct: 341 LALAAMVMLLPAPLSVLSAG-----FWLSFGGVLWLLWCLPRTGPEGIGGGLRGF----- 390
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
S I F G + N+ IP + +V+P L+
Sbjct: 391 ------------LAAQGVASLGLLPLCIALFGGTARLGPLVNLPVIPWWTMLVVPLSLLG 438
Query: 134 ILLMILS------LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
L +L + + + +A + + P + ++
Sbjct: 439 TGLHVLHDGAGRWAWRAAAWLFELSWEALQPLALHPQAM---WWLAEAPRWALPVALLGV 495
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP-----DLLISEKGNLVALVDKNTLIS 242
+ R G + G+ + + +P +P +LL+ + G A++ + +
Sbjct: 496 FWWLLP----RGAGGGLAGLLLCLPLLWPARHAPAAGELELLVHDVGQGTAVLVRTARHA 551
Query: 243 N 243
Sbjct: 552 L 552
>gi|227547369|ref|ZP_03977418.1| ComEC operon protein [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|227212184|gb|EEI80080.1| ComEC operon protein [Bifidobacterium longum subsp. infantis ATCC
55813]
Length = 584
Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 15/150 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + ++ + +
Sbjct: 393 YGFALSSAAVLGIVLFAERLAGAFE------------RAMPHGIAEMMAMTV--AAQLFT 438
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 439 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCEPWLAGVFAWISSWGTLV 498
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ +A + + + T V IV
Sbjct: 499 MERVALWLGGSTMAVIPWKDGVTGAVLIVA 528
>gi|110799672|ref|YP_696724.1| competence family protein [Clostridium perfringens ATCC 13124]
gi|110674319|gb|ABG83306.1| competence family protein [Clostridium perfringens ATCC 13124]
Length = 551
Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 83/256 (32%), Gaps = 40/256 (15%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YDP + + I + P LF F + G I FY
Sbjct: 264 RLFKTYDPLSSISLGAVILLIYKPYN-----LFSMGFLLSFGGTLGIILFYKN------- 311
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + ++G A L+ F + LI+ L PI+
Sbjct: 312 ------LLEGFYMLPPKLNE--YLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVTPII 363
Query: 123 SFVVIP--------AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++ LI +++ ++++ + F + LD ++ + F I
Sbjct: 364 VILLQILLISILIGGNLIGVIVFLINIIFMVFRGILVFLDKVVWVTPY---LSPVFAIAY 420
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-----LLISEKG 229
+ ++ + ++ F K I I + + + +F D ++I
Sbjct: 421 MTMFLWIYMSLKG----FKKFKIGVYLVIPVLLLNLYVFGAKIRVVEDKWNKAIVIESGF 476
Query: 230 NLVALVDKNTLISNYS 245
VALV+ N+ S
Sbjct: 477 KKVALVNNNSDYFKKS 492
>gi|168215671|ref|ZP_02641296.1| competence family protein [Clostridium perfringens NCTC 8239]
gi|182382025|gb|EDT79504.1| competence family protein [Clostridium perfringens NCTC 8239]
Length = 551
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 29/191 (15%), Positives = 61/191 (31%), Gaps = 31/191 (16%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YDP + + I + P LF F + G I FY
Sbjct: 264 RLFKTYDPLSSISLGAVILLIYKPYN-----LFSMGFLLSFGGTLGIILFYKK------- 311
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + ++G A L+ F + LI+ L PI+
Sbjct: 312 ------LLEGFYMLPPKLNE--YLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVTPII 363
Query: 123 SFVVIP--------AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++ LI +++ ++++ + F + LD ++ + F I
Sbjct: 364 VILLQILLISILIGGNLIGVIVFLINIIFMVFRGILVFLDKVVWVTPY---LSPVFAIAY 420
Query: 175 IPETSFVTIVV 185
+ ++ + +
Sbjct: 421 MTMFLWIYMSL 431
>gi|19746370|ref|NP_607506.1| competence protein [Streptococcus pyogenes MGAS8232]
gi|19748567|gb|AAL98005.1| putative competence protein [Streptococcus pyogenes MGAS8232]
Length = 747
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVSGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTALLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILVE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLTNEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|28378748|ref|NP_785640.1| ComE operon protein 3 [Lactobacillus plantarum WCFS1]
gi|28271585|emb|CAD64490.1| ComE operon protein 3 [Lactobacillus plantarum WCFS1]
Length = 763
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 32/275 (11%), Positives = 83/275 (30%), Gaps = 14/275 (5%)
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
P ++ ++ + + A S + +H ++ L
Sbjct: 323 NPLVLSQLGGQLSYGLALLLILMPGLPPWRLAIWIQVISLPVLLVATAQWH---LWSLAV 379
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNI-PFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N++ PI S+V++P ++ + + V W L + +S IG
Sbjct: 380 NLVVAPIFSWVLLPVTVVGA---SIGFGSTNVTSVCEWVLVNFQNWLEWVSHWPGLLIIG 436
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIR--HIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
+ ++ + L + +T R + ++ + FP + + +G+
Sbjct: 437 Q--PSTLWAWTLSLLSLWLLRTPRRRYYWRLLLAYACFSLSLRFPLHGAVQFIDVGQGDS 494
Query: 232 VALVDKNTLISNYSNPPS---FIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRS 288
+ + + + F +W++ + P A + L + L + S
Sbjct: 495 ILIRQPFNRQVSLIDTGGQLHFSGPRWQAEQVQPRSRAETITVNYLHRLGITHLDTVYLS 554
Query: 289 MQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL 323
+ + + V+V +
Sbjct: 555 HKDVDHIGDLGELLRLMPVNQVVVPAGMARLAKFQ 589
>gi|332076230|gb|EGI86696.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus pneumoniae GA41301]
Length = 746
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 8/137 (5%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGSASA 96
F+ F +P ++ + + I ++ ++A S
Sbjct: 310 FALTVL-----VLFIVMPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAVTSESLVISLGI 364
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
L +F + ++ + + V +P I +L L + W L+ I
Sbjct: 365 LPILSFYFAEFQPWSILLTFVFSFLFDLVFLPLLSILFVLSFLYPVIQLNFIFEW-LEGI 423
Query: 157 IHIAHRISVAHNEFCIG 173
I + +++ F
Sbjct: 424 IRLVSQVASRPLVFGQP 440
>gi|301794094|emb|CBW36500.1| putative competence protein [Streptococcus pneumoniae INV104]
gi|332204957|gb|EGJ19022.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus pneumoniae GA47901]
Length = 746
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 8/137 (5%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGSASA 96
F+ F +P ++ + + I ++ ++A S
Sbjct: 310 FALTVL-----VLFIVMPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAVTSESLVISLGI 364
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
L +F + ++ + + V +P I +L L + W L+ I
Sbjct: 365 LPILSFYFAEFQPWSILLTFVFSFLFDLVFLPLLSILFVLSFLYPVIQLNFIFEW-LEGI 423
Query: 157 IHIAHRISVAHNEFCIG 173
I + +++ F
Sbjct: 424 IRLVSQVASRPLVFGQP 440
>gi|297698503|ref|XP_002826357.1| PREDICTED: serine/threonine-protein kinase TAO2-like isoform 2 [Pongo
abelii]
Length = 1122
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 63/227 (27%), Gaps = 14/227 (6%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 898 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 957
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 958 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPVP 1017
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKL 342
R + V + + + I + + + +
Sbjct: 1018 GPQRRNPRTTQHPLALLARVWVLCKGWNWRLARASQGLASHLPPWAIHTLASWGLLRGER 1077
Query: 343 CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ G + P + + + PW
Sbjct: 1078 PTRIPRLLPRSQRQLGPPA-SRQPLPGTLAGRRSRTRQSRALP--PW 1121
>gi|225352045|ref|ZP_03743068.1| hypothetical protein BIFPSEUDO_03653 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157292|gb|EEG70631.1| hypothetical protein BIFPSEUDO_03653 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 583
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 55/185 (29%), Gaps = 20/185 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ + + P F F+ + I F
Sbjct: 361 LFLGRRTQALSTLSWTTLGMLMVNPH-----MSRSFGFALSCAAVLGIVLFAGP------ 409
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ I +F+ + A + +PVY + AN++ P
Sbjct: 410 -------LGAWLTPIMPAFIAQTMAMT-IAAQLFTLPIQVLIEPELPVYSIPANLVVAPF 461
Query: 122 LSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ F + + IL SL I + +WG I+ +A + +
Sbjct: 462 VGFSTLAGLASLAISWILPSLGFIFASLASWGTAIMEFMALNLGSGDHATIPWTGDAGGA 521
Query: 181 VTIVV 185
+ I++
Sbjct: 522 LLIIL 526
>gi|21910609|ref|NP_664877.1| putative competence protein [Streptococcus pyogenes MGAS315]
gi|21904810|gb|AAM79680.1| putative competence protein [Streptococcus pyogenes MGAS315]
Length = 747
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTALLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLINEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|78185127|ref|YP_377562.1| ComEC/Rec2-related protein [Synechococcus sp. CC9902]
gi|78169421|gb|ABB26518.1| ComEC/Rec2-related protein [Synechococcus sp. CC9902]
Length = 611
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 20/216 (9%), Positives = 49/216 (22%), Gaps = 24/216 (11%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + + + +I + + A I
Sbjct: 269 VGFQLSAAATAGL-----TLSAPGVEQQLLRCCPSRIRWLASAIAVSWAALI------WT 317
Query: 97 SIFLIKHFHCIP--VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ HF P + + + LL+ L +
Sbjct: 318 LPLQLLHFGSTPLYALVANLLAAPLLAPLTLSAMGLAVVALLLPHPLLVGLSWPVQQLAG 377
Query: 155 IIIHIAHRISVAHNEFCI-GRIPETSFVTIVVEFL-LMVFCKTNIRHIGSIMIGITIIIL 212
++I + H IS + G + + + ++ + +R G + + + +
Sbjct: 378 MLISLVHWISHWPAAQLLSGHPQPWVVLLMAFGLIPWVISSQRGLRGFGVVTLLSAVFLH 437
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP 248
G +VA +
Sbjct: 438 AVVQL---------GDGVVVASRFGRHWLLARHRGR 464
>gi|227524105|ref|ZP_03954154.1| competence protein ComEC [Lactobacillus hilgardii ATCC 8290]
gi|227088736|gb|EEI24048.1| competence protein ComEC [Lactobacillus hilgardii ATCC 8290]
Length = 717
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 26/231 (11%), Positives = 76/231 (32%), Gaps = 14/231 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F + ++ I + +P+ I+ ++ + + S
Sbjct: 266 GFKMS-QLSALSLTLIVNLFLLPEAIFMMSVQLSYGLAFGLIASSKMTYLRQTVLLNLLS 324
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWG 152
+F + +H + L N++ +P+ + P + +L L + + W
Sbjct: 325 LPILLFHLYEWHVLS---LAVNLMVLPLFGRTIFPLVIFGLL---FGLVSSKLVIPVEWV 378
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIII 211
L + + G+ + ++ L+++ K +R I+ G+ ++
Sbjct: 379 LMAFNRSLNMVGRLPGMIVFGKPQLVVVLLMLGLTLIIMIHSKKRVRGYKIILAGLYLVT 438
Query: 212 LFTFPYSFSPDLLISE--KGNLVALVDK---NTLISNYSNPPSFIFSQWKS 257
+ ++ + + +G+ + + I + +F QW+
Sbjct: 439 FIWIHFPIHGEVSMFDVGQGDSFLIRTPFNQSVTIIDTGGKVTFNQQQWQR 489
>gi|90414071|ref|ZP_01222054.1| putative permease PerM [Photobacterium profundum 3TCK]
gi|90324866|gb|EAS41394.1| putative permease PerM [Photobacterium profundum 3TCK]
Length = 356
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 55/172 (31%), Gaps = 8/172 (4%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ T K + + + N IR + + ++ + L+ ++ +
Sbjct: 189 GILPKNRRLTSKVGAEMNEQISNYIRGKVTEIFIIGIASYITFAVMDLRYAVLLGVLVGL 248
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+L IP A + + +++ + + ++ I + + +
Sbjct: 249 SVL----IPYIGAAAVTVPVAMVGLFQWGLTPDFWWLLAAYGVIQALDGNVLVPVLFSEA 304
Query: 180 F----VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
V I+V L+ +I + + ++ S PD +SE
Sbjct: 305 VNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWGALPSSEPDETVSE 356
>gi|23466008|ref|NP_696611.1| putative transmembrane protein related to ComA [Bifidobacterium
longum NCC2705]
gi|23326726|gb|AAN25247.1| conserved hypothetical transmembrane protein related to ComA
[Bifidobacterium longum NCC2705]
Length = 562
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 15/150 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + ++ + +
Sbjct: 371 YGFALSSAAVLGIVLFAERLAGAFE------------RAMPHGIAEMMAMTV--AAQLFT 416
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 417 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCEPWLAGVFAWISSWGTLV 476
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ +A + + + T V IV
Sbjct: 477 MERVALWLGGSTMAVIPWKDGVTGAVLIVA 506
>gi|160893065|ref|ZP_02073853.1| hypothetical protein CLOL250_00610 [Clostridium sp. L2-50]
gi|156865148|gb|EDO58579.1| hypothetical protein CLOL250_00610 [Clostridium sp. L2-50]
Length = 986
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 59/165 (35%), Gaps = 25/165 (15%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + ++ + T+ K ++Q+F + S +
Sbjct: 451 DAGFQLSFAAVAG----------LAVIHPVYVQTFGKKGKLRQAFG------VSLSSSLA 494
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ +++ P+YG++ N+L +P++S +++ A + A + + +
Sbjct: 495 TLPICVFYYYQFPLYGILLNLLVVPLVSCLLMSALVTAGCGI---ISIKAAELAGIPAHF 551
Query: 156 IIHIAHRISVAH-----NEFCIGRIPETSFVTIVVE-FLLMVFCK 194
I+ + R+ + +G I + + +++ +
Sbjct: 552 ILILYERLCGLSEKIPFSSINVGHISVRMVLVYYLGLGVVLFILR 596
>gi|86750359|ref|YP_486855.1| diguanylate cyclase [Rhodopseudomonas palustris HaA2]
gi|86573387|gb|ABD07944.1| diguanylate cyclase [Rhodopseudomonas palustris HaA2]
Length = 420
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 41/115 (35%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
+ + ++ +G S+ ++ + ++ + A IG S S IF
Sbjct: 75 ASFAAVAVVGPTLSLRLLLAQRFRTRGPDARVSKWVRLFAIMSFVAAIGWGSSLSILIFT 134
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ V+ LI + +P+ +I + ++L L I V + I
Sbjct: 135 TEGLPLFAVFALICAPVQGASARAYAMPSVVILHISIVLGLVGIAATVFGIAIAI 189
>gi|28895702|ref|NP_802052.1| competence protein [Streptococcus pyogenes SSI-1]
gi|28810951|dbj|BAC63885.1| putative competence protein [Streptococcus pyogenes SSI-1]
Length = 747
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTALLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLINEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|315504209|ref|YP_004083096.1| DNA internalization-related competence protein comec/rec2
[Micromonospora sp. L5]
gi|315410828|gb|ADU08945.1| DNA internalization-related competence protein ComEC/Rec2
[Micromonospora sp. L5]
Length = 783
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 14/152 (9%), Positives = 39/152 (25%), Gaps = 16/152 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F+ + F + + +
Sbjct: 344 DPGFALSVCATGGLLLFAPGWRDALRRRGVPA-------------GLAEALAVPAAAQLA 390
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGL 153
+ + + + AN+LA+P ++ + L A+L L + + + +W
Sbjct: 391 CGPVIAGLSATVSLVAVPANLLAVPAVAPATVLGVLAAVLSPLWPGGAEFLA-WLASWPA 449
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++ +A + + +
Sbjct: 450 RWLVAVAAYGADLPAGNLPWAGGVAGALLLAA 481
>gi|227893369|ref|ZP_04011174.1| competence protein ComEC [Lactobacillus ultunensis DSM 16047]
gi|227864784|gb|EEJ72205.1| competence protein ComEC [Lactobacillus ultunensis DSM 16047]
Length = 761
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 56/138 (40%), Gaps = 8/138 (5%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK 102
G++ I + +P++ ++ + ++ + F + + + L+
Sbjct: 317 LLGLTGILHLLVVPRLFMATGAILSYVLALGLQLTDKFNEIKQ---SILLNLLLTPLLLL 373
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIA 160
F+ + + ++ N+L +P +++VIP I +++ +L + ++ G +I ++
Sbjct: 374 FFYQVNLLTVLFNMLVVPYFNWIVIPLTFINLIIFPFIKNLAPLFEQILELGEKVISQLS 433
Query: 161 HRISVAHNEFCIGRIPET 178
+ G++
Sbjct: 434 Q--TKW-GLITFGQMNWW 448
>gi|168205852|ref|ZP_02631857.1| competence family protein [Clostridium perfringens E str. JGS1987]
gi|170662632|gb|EDT15315.1| competence family protein [Clostridium perfringens E str. JGS1987]
Length = 551
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 84/261 (32%), Gaps = 50/261 (19%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YDP + + I + P LF F + G I FY
Sbjct: 264 RLFKTYDPLSSISLGAVILLIYKPYN-----LFSMGFLLSFGGTLGIILFYKK------- 311
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + ++G A L+ F + LI+ L PI+
Sbjct: 312 ------LLEGFYMLPPKLNE--YLSLGVSAQAFIYPILVIAFGKFSINFLISTFLVTPII 363
Query: 123 SFVVIP--------AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++ LI +++ ++++ + F + LD ++ + +S
Sbjct: 364 VILLQILLISILIGGNLIGVIVFLINIIFMVFRGILVFLDKVVWVTPYLS---------- 413
Query: 175 IPETSFVTIVVEFLLM-----VFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-----LL 224
P + + + FL + F K I I + I + +F D ++
Sbjct: 414 -PVFAIAYMTM-FLWIYMSIKGFKKFKIGVYLVIPVLILNLYVFGAKIRVVEDKWNKAIV 471
Query: 225 ISEKGNLVALVDKNTLISNYS 245
I VALV+ N+ S
Sbjct: 472 IESGFKKVALVNNNSDYFKKS 492
>gi|322385783|ref|ZP_08059427.1| competence protein ComEC [Streptococcus cristatus ATCC 51100]
gi|321270521|gb|EFX53437.1| competence protein ComEC [Streptococcus cristatus ATCC 51100]
Length = 746
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 17/143 (11%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+F NF GI + Y + I M + + +++ + ++G
Sbjct: 318 AIFMPNFLLTTGGILSCAYAFVISVMDFEH----------LPPVRKVLAESLTISLGI-- 365
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
LI +F + ++ L + ++PA +L L +
Sbjct: 366 ----LPILIFYFSEFQPWSVLLTFLFSVVFDLFMLPALTFIFVLSPLLKITQVNVLFELL 421
Query: 153 LDIIIHIAHRISVAHNEFCIGRI 175
++I A IS F I
Sbjct: 422 EELIRWTAS-ISSRPVVFGQPSI 443
>gi|168483025|ref|ZP_02707977.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus pneumoniae CDC1873-00]
gi|172043377|gb|EDT51423.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus pneumoniae CDC1873-00]
gi|332201421|gb|EGJ15491.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus pneumoniae GA47368]
Length = 746
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 8/137 (5%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGSASA 96
F+ F +P ++ + + I ++ ++A S
Sbjct: 310 FALTVL-----VLFIVMPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAVASESLVISLGI 364
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
L +F + ++ + + V +P I +L L + W L+ I
Sbjct: 365 LPILSFYFAEFQPWSILLTFVFSFLFDLVFLPLLSILFVLSFLYPVIQLNFIFEW-LEGI 423
Query: 157 IHIAHRISVAHNEFCIG 173
I + +++ + F
Sbjct: 424 IRLVSQVASSPLVFGQP 440
>gi|326382637|ref|ZP_08204328.1| prolipoprotein diacylglyceryl transferase [Gordonia neofelifaecis
NRRL B-59395]
gi|326198756|gb|EGD55939.1| prolipoprotein diacylglyceryl transferase [Gordonia neofelifaecis
NRRL B-59395]
Length = 582
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 40/135 (29%), Gaps = 4/135 (2%)
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
+ +G +P ++ ++ +++ + R + +I + + P LI +
Sbjct: 2 WHLGPVPIRAYALFIIIGIIVAVWWGSRRWMARGGQPGEVIDVALWA---VPFGLIGGRI 58
Query: 230 NLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSM 289
V L D NT +F W L A + +N
Sbjct: 59 YHV-LTDWNTYFGPGGRGLGAVFKIWDGGLGIWGAVAFGAVGAWIGARNMGIKLPPFGDA 117
Query: 290 QPRKFLCIKKSFCVG 304
L + +G
Sbjct: 118 IAPAILLAQGIGRLG 132
>gi|153854188|ref|ZP_01995496.1| hypothetical protein DORLON_01487 [Dorea longicatena DSM 13814]
gi|149753237|gb|EDM63168.1| hypothetical protein DORLON_01487 [Dorea longicatena DSM 13814]
Length = 719
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 61/177 (34%), Gaps = 41/177 (23%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
IT ++ P T + A L+ P + L+D F + + A+
Sbjct: 256 ITGRHYDMP--TALAASAVLTVGIHPLY--LYDGGFWLSFGAVFAV-------------- 297
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + ++ + G + ++ +F IPVY ++ N++ +P++S
Sbjct: 298 -------CTVIPVLENEMRCKSLCAGLGINVLLWPVILYNFFEIPVYSILLNLIILPLMS 350
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-------------AHRISVAH 167
V+ + + + M IP + W I+ + A ++
Sbjct: 351 VVLTCGMIGSFIKM---AGWIPGKWILWICRCILWVYDKCCVFTIKLPMARWVAGRP 404
>gi|325956534|ref|YP_004291946.1| Competence protein ComEC [Lactobacillus acidophilus 30SC]
gi|325333099|gb|ADZ07007.1| Competence protein ComEC [Lactobacillus acidophilus 30SC]
Length = 761
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 68/191 (35%), Gaps = 15/191 (7%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
I + +P++ ++ + ++ + SF + + + L+ F+ I
Sbjct: 323 IIHLLFVPRLFMAAGALLSYILALGLQLTDSFNGLKQ---SILLNLLLTPLLLLFFYQIN 379
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVA 166
++ N+L +P ++VV+P I +L + L ++ G +I ++
Sbjct: 380 FLTVLFNMLVVPYFNWVVMPLAFINVLTFGFTKRLAPFFEKILELGEQLIERLSQ---TK 436
Query: 167 HNEFCIGRIPETSFVTIVVEFLLMVF-------CKTNIRHIGSIMIGITIIILFTFPYSF 219
G+I + +++ + ++ + N + IG + + +
Sbjct: 437 LGLLDFGQINWWQCLLLLIVSIALIIALREKPEWRFNCKKIGLTLTVFYAVFFSMIHFPL 496
Query: 220 SPDLLISEKGN 230
+ + G
Sbjct: 497 RGQVTFIDVGQ 507
>gi|315038080|ref|YP_004031648.1| Competence protein ComEC [Lactobacillus amylovorus GRL 1112]
gi|312276213|gb|ADQ58853.1| Competence protein ComEC [Lactobacillus amylovorus GRL 1112]
Length = 761
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 24/191 (12%), Positives = 68/191 (35%), Gaps = 15/191 (7%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
I + +P++ ++ + ++ + SF + + + L+ F+ I
Sbjct: 323 IIHLLFVPRLFMAAGALLSYILALGLQLTDSFNGLKQ---SILLNLLLTPLLLLFFYQIN 379
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVA 166
++ N+L +P ++VV+P I +L + L ++ G +I ++
Sbjct: 380 FLTVLFNMLVVPYFNWVVMPLAFINVLTFGFTKRLAPFFEKILELGEQLIERLSQ---TK 436
Query: 167 HNEFCIGRIPETSFVTIVVEFLLMVF-------CKTNIRHIGSIMIGITIIILFTFPYSF 219
G+I + +++ + ++ + N + IG + + +
Sbjct: 437 LGLLDFGQINWWQCLLLLIVSIALIIALREKPEWRFNCKKIGLTLTVFYAVFFSMIHFPL 496
Query: 220 SPDLLISEKGN 230
+ + G
Sbjct: 497 RGQVTFIDVGQ 507
>gi|301623115|ref|XP_002940867.1| PREDICTED: extracellular calcium-sensing receptor-like [Xenopus
(Silurana) tropicalis]
Length = 853
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 59/200 (29%), Gaps = 4/200 (2%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L F + + +I +I + + +K + I+ S+ + +
Sbjct: 652 LRQVAFGMVFALCISCVLAKTITVVIAFNATKPGSRLRKWTGIRVSYCLILLCALNQLTI 711
Query: 94 ASASIFLIKHFHCI----PVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ F+ + +I N +F + L + + + + +
Sbjct: 712 CGIWLIFFPPFYELDTGTKPGIIILNCNEGSPFAFWCMLGYLGLLASISFIVAFLARRLP 771
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
+ + ++ ++ V + ++ +G I +
Sbjct: 772 DSFNEAKLITFSMLAFLSVWVSFIPAYLSARGMYTVAMEVFAILSSSWAVVGCIFVPKCY 831
Query: 210 IILFTFPYSFSPDLLISEKG 229
I+LF + L++ +G
Sbjct: 832 IVLFRPNMNSREHLMVKGRG 851
>gi|259047456|ref|ZP_05737857.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
gi|259035647|gb|EEW36902.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
Length = 775
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 89/266 (33%), Gaps = 33/266 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
K++ P + + + + S +PG L++ F Y + I K + +
Sbjct: 299 KRWTPLRHHSQLWSLLGMLVVSLLIWPGILWNVAFQLSYALSAVILLLSKWQKSVLPKVN 358
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ W I S A + ++F + ++ L +
Sbjct: 359 ASLW-------------------IPIGVSVMALPLVCQYFFYWNAFSIVLTALFSLLFEG 399
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWG------LDIIIHIAHRISVAHNEFCIGRIPET 178
V+ P I +L ++ N+ + G L ++ + + F I E
Sbjct: 400 VLFPLLTIYLLAVLSGWGNLVDIICFLGEALLSALTQLLTFCQKFTFTKFTFGIWEPWEW 459
Query: 179 SFVTIVVEFLLMVFCKTNI---RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+++ F L++F + + + + + I +++ + + L+ +G+ + ++
Sbjct: 460 GVYFLLLSFALVLFERRKMTVKKGLFCLGTLILLLVEVPYHWGTELILIDVGQGDSILVM 519
Query: 236 DK---NTLISNYSNPPSFIF-SQWKS 257
+ + F +WK
Sbjct: 520 GPGWNQATLIDTGGLSDFASKEEWKR 545
>gi|262203078|ref|YP_003274286.1| ComEC/Rec2-like protein [Gordonia bronchialis DSM 43247]
gi|262086425|gb|ACY22393.1| ComEC/Rec2-related protein [Gordonia bronchialis DSM 43247]
Length = 519
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 19/180 (10%), Positives = 48/180 (26%), Gaps = 25/180 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L +++ FPA L P PG F+ + + + +
Sbjct: 301 LLSSRRAQAFPALGAAVIGGLLWWPELALAPG-----FALSVVATAGLVMWAPRLR---- 351
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + + + + V G+IAN+L P+
Sbjct: 352 ---------DRLRGARVPAGLAEVLAMAIAAQVVTAPVVAMVTGTFSVVGVIANLLVAPV 402
Query: 122 LSFVVIPA---GLIAILLMILSLDN----IPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++ + + ++ L + + + L ++ A +
Sbjct: 403 VALISVVGTGAAILGALGPPGGIGASVGELLIRGLGPELWWMLWCARTLGSPRWANIPVP 462
>gi|182624013|ref|ZP_02951801.1| competence family protein [Clostridium perfringens D str. JGS1721]
gi|177910906|gb|EDT73260.1| competence family protein [Clostridium perfringens D str. JGS1721]
Length = 551
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 63/196 (32%), Gaps = 40/196 (20%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YDP + + I + P LF F + G I FY
Sbjct: 264 RLFKTYDPLSSISLGAIILLIYKPYN-----LFSMGFLLSFGGTLGIILFYKK------- 311
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + ++G A L+ F + LI+ L PI+
Sbjct: 312 ------LLEGFYMLPPKLNE--YLSLGLSAQAFIYPILVITFRKFSINFLISTFLVTPII 363
Query: 123 SFVVIP--------AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++ LI +++ ++++ + F + LD ++ + +S
Sbjct: 364 VILLQILLISILIGGNLIGVIVFLINIIFMVFRGILVFLDKVVWVTPYLS---------- 413
Query: 175 IPETSFVTIVVEFLLM 190
P + + + FL +
Sbjct: 414 -PVFAIAYMTM-FLWI 427
>gi|183220526|ref|YP_001838522.1| putative competence protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910635|ref|YP_001962190.1| competence protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167775311|gb|ABZ93612.1| Competence protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778948|gb|ABZ97246.1| Putative competence protein; putative membrane protein; putative
signal peptide [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 609
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 19/121 (15%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + + I Y + + W + T S +
Sbjct: 238 IGFLLSFSAVFGIFYLKPSLDRMVFPRFQSLWKEN--------------LTLTTACSLCS 283
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
LI +FH G+ N +P+ +++P+ IL+ L +P + +D +
Sbjct: 284 FPILIYYFHSFSYGGIWINYCLVPMAG-ILLPSLYFTILIQTL----LPTVLSGLFIDWL 338
Query: 157 I 157
Sbjct: 339 W 339
>gi|149911932|ref|ZP_01900530.1| DNA internalization-related competence protein [Moritella sp. PE36]
gi|149804979|gb|EDM65008.1| DNA internalization-related competence protein [Moritella sp. PE36]
Length = 508
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 35 FDFNFSSYYKGISA--IGYFYSIPKMIYSSESHNTWTWK-KISSIKQSFLNEI--RANIG 89
F +F + ++A I + + P + + + T K +++ + + L+++
Sbjct: 314 FSISFWLSFSAMAAVFILVWLNKPTKSVAIDRNRVVTNKDRVTGVIKGALHKVTHLCYSQ 373
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + F + + N++ IP+ S
Sbjct: 374 VLLTVLILPIQVAVFSGFSLMSALVNLVFIPVFS 407
>gi|254426979|ref|ZP_05040686.1| DNA internalization-related competence protein ComEC/Rec2
[Alcanivorax sp. DG881]
gi|196193148|gb|EDX88107.1| DNA internalization-related competence protein ComEC/Rec2
[Alcanivorax sp. DG881]
Length = 740
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 33/319 (10%), Positives = 84/319 (26%), Gaps = 49/319 (15%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ A + L P L + ++ I + SH W
Sbjct: 316 WRALGMALLVVLLITPLAALSASL-----WLSFGAVACIAML---------TRSHAPWQL 361
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + + + F +AN++ +P+ + +VIPA
Sbjct: 362 MLLLPVVMAVAGAVL------------------FQQWTPSAPLANLILVPLYTLLVIPAA 403
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
L+ L G A G++ + + ++ +P + + +++
Sbjct: 404 LLGALFQ----QPWLLGAAATGVEFSVWVMTWLANLG-------VPSWLRLPSMTAGIVL 452
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ + + + + P L + +L A L
Sbjct: 453 MVGLMLLLMPFLPFPRRLLPLFLLPWLTQKPATLAPGEWSLTAFDVGQGLALVIR----- 507
Query: 251 IFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
P + + ++ + +++ R++ S +
Sbjct: 508 TREHLLIYDAGPSWPGGSMAAQSMRPWLSVTGQQVDRTVISHGDN-DHAGGLTDLPASGL 566
Query: 311 IVGVLKRKDMIRLSCQLSD 329
++ + CQ D
Sbjct: 567 LLSGEPHRVPGSQLCQAGD 585
>gi|168491044|ref|ZP_02715187.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus pneumoniae CDC0288-04]
gi|183574646|gb|EDT95174.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus pneumoniae CDC0288-04]
Length = 746
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 8/137 (5%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGSASA 96
F+ F +P +++ + + I ++ ++A S
Sbjct: 310 FALTVL-----VLFIVMPNFFFTAGGVLSCAYAFILTMTSKEGEGLKAVASESLVISLGI 364
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
L +F + ++ + + +P I +L L + W L+ I
Sbjct: 365 LPILSFYFAEFQPWSILLTFIFSFLFDLTFLPLLSILFVLSFLYPVIQLNFIFEW-LEGI 423
Query: 157 IHIAHRISVAHNEFCIG 173
I + +++ F
Sbjct: 424 IRLVSQVASRPLVFGQP 440
>gi|54310026|ref|YP_131046.1| putative permease PerM [Photobacterium profundum SS9]
gi|46914465|emb|CAG21244.1| putative permease PerM [Photobacterium profundum SS9]
Length = 356
Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 56/172 (32%), Gaps = 8/172 (4%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ T K + + + N IR + + ++ + L++ ++ +
Sbjct: 189 GILPKNRRLTSKVGAEMNEQISNYIRGKVTEIFIIGIASYITFAVMDLRYAVLLSVLVGL 248
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+L IP A + + +++ + + ++ I + + +
Sbjct: 249 SVL----IPYIGAAAVTVPVAMVGLFQWGLTPDFWWLLAAYGVIQALDGNVLVPVLFSEA 304
Query: 180 F----VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
V I+V L+ +I + + ++ S PD +SE
Sbjct: 305 VNLHPVAIIVAVLVFGGLWGFWGVFFAIPLATLVKAVWGALPSSEPDDTVSE 356
>gi|218281279|ref|ZP_03487776.1| hypothetical protein EUBIFOR_00340 [Eubacterium biforme DSM 3989]
gi|218217526|gb|EEC91064.1| hypothetical protein EUBIFOR_00340 [Eubacterium biforme DSM 3989]
Length = 412
Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 9/158 (5%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK 102
+ GI A + I + Y + + ++ SF + + T + + + +
Sbjct: 128 FTGIIAALFTVEIYHICYERKWYIKMPESVPPMVQDSFAALVPLVLNTIIAVAIANLSLS 187
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAI----LLMILSLDNIPFGVMAWGLDIIIH 158
F + LI NILA + +PA LI + LL L W I +
Sbjct: 188 -FGKVAFPQLIMNILAPAVTGMDTLPALLIVMFLTQLLWFFGLHGPSITSAVWATFAIAY 246
Query: 159 IAHRISVAHNEFCIGRIPETSF----VTIVVEFLLMVF 192
A I+ + I + + L +
Sbjct: 247 GAENIAAYTAGQPVQHIFTFGLFYGILCVTGSGLTLGL 284
>gi|330991094|ref|ZP_08315048.1| Putative transporter yebQ [Gluconacetobacter sp. SXCC-1]
gi|329761915|gb|EGG78405.1| Putative transporter yebQ [Gluconacetobacter sp. SXCC-1]
Length = 466
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 34/215 (15%), Positives = 63/215 (29%), Gaps = 7/215 (3%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
P T +A +S P P PG FD + + A G I T
Sbjct: 183 IPLGATALVLALVSLPRTPVSPGSFDGASAL--LNVLAFGALIMAGDSIAHHAGAVQVTA 240
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
I+ + +L R + T+ + I+ F + G +A L + P
Sbjct: 241 LAITGLAAGWLLVRRQHGQTHPMFPIDMLRIRAFRNGTLVGFVA--FVASNLFMISFPFT 298
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
L ++ S+ + G I+ +A IS + + + FL +
Sbjct: 299 LQSMFHYPPSIVGLLMTPWPVG---IMAVAPLISRLSDRVPAAILSSVGLGMTSLGFLAL 355
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ F + +++
Sbjct: 356 YLLPAAPAWFDIAWRIALGGMGFGVFQPPNNRIMM 390
>gi|299135647|ref|ZP_07028831.1| DNA internalization-related competence protein ComEC/Rec2
[Acidobacterium sp. MP5ACTX8]
gi|298601771|gb|EFI57925.1| DNA internalization-related competence protein ComEC/Rec2
[Acidobacterium sp. MP5ACTX8]
Length = 898
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 75/258 (29%), Gaps = 15/258 (5%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA---NIGTYGSASASIFLIKHFHCIP 108
+M + + + IG + + +FH
Sbjct: 449 LRVRLRMFGVLFAQLLGKGARDLPLWLLLAVTWACEAFLIGIVVELCMVLPMAVYFHRAT 508
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAH 167
+ L N++++P+++ ++ A L + ++ S L IP + A L + + +
Sbjct: 509 LLALPLNLISVPLITVLICVAVLTFCVALLNSWLAMIPGAITALLLHTVRALVEHLGHIA 568
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKTNIR-----HIGSIMIGITIIILFTFPYSFSPD 222
+P + + + L+ R +G + + + +
Sbjct: 569 LADLRVPMPAPAAIALACAALVFCCWALRARQRMWQWVGVAAMAVIPLAVLLPEPPLLHR 628
Query: 223 LLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSL 282
++ V ++L+ + + A + P + D+ E+ +
Sbjct: 629 GVLEVTALDVG--QGDSLLVVSPEGRTLLVD----AGGPVGQQVPSPDRWDIGEEVVAPY 682
Query: 283 KEILRSMQPRKFLCIKKS 300
R + L
Sbjct: 683 LWSRRIRRLDAILLTHAH 700
>gi|289805040|ref|ZP_06535669.1| hypothetical protein Salmonellaentericaenterica_11497 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 83
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ ++ + + FH I V ++AN+ A+P ++FV +P L ++L
Sbjct: 5 RGLRWLLNLLHLQAGITLLLLPLQVALFHGISVTAMLANLFAVPWVTFVTVPLILAGMIL 64
Query: 137 M---ILSLDNIPFGV 148
L+ + +
Sbjct: 65 HLTGPFFLEEWVWYL 79
>gi|331701038|ref|YP_004397997.1| glycosyl transferase family 39 [Lactobacillus buchneri NRRL
B-30929]
gi|329128381|gb|AEB72934.1| glycosyl transferase family 39 [Lactobacillus buchneri NRRL
B-30929]
Length = 762
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 50/179 (27%), Gaps = 13/179 (7%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFL-NEIRANIGTYGSASASIF 99
+ + I + +F K +S S + + + + Y +
Sbjct: 373 ALFGLIGGLVFFRDRRKRWFSLSKQQKQLILWTSWLIPVYGFFSVASFFHPYYMIMLAPP 432
Query: 100 LIKHFHC--IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F + GL N L F ++P ++A + + W L +I
Sbjct: 433 IAALFGTGVTALVGLFKNSLRTSW-KFYLLPIAIVATAALQ---SWYVYSYYPW-LTWVI 487
Query: 158 HIAHR-----ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
IA ++V + ++I+ T I ++
Sbjct: 488 LIAAIGFSVGMAVLPRGRAFQALLVGGLISIMAAPTWWSLTPTIAAESAMIPTAGPSLL 546
>gi|302869316|ref|YP_003837953.1| DNA internalization-related competence protein ComEC/Rec2
[Micromonospora aurantiaca ATCC 27029]
gi|302572175|gb|ADL48377.1| DNA internalization-related competence protein ComEC/Rec2
[Micromonospora aurantiaca ATCC 27029]
Length = 783
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 14/152 (9%), Positives = 39/152 (25%), Gaps = 16/152 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F+ + F + + +
Sbjct: 344 DPGFALSVCATGGLLLFAPGWRDALRRRGVPA-------------GLAEALAVPAAAQLA 390
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGL 153
+ + + + AN+LA+P ++ + L A+L L + + + +W
Sbjct: 391 CGPVIAGLSATVSLVAVPANLLAVPAVAPATVLGVLAAVLSPLWPGGAEFLA-WLASWPA 449
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++ +A + + +
Sbjct: 450 RWLVAVAAYGADLPAGNLPWAGGVAGALLLAA 481
>gi|15835232|ref|NP_296991.1| hypothetical protein TC0617 [Chlamydia muridarum Nigg]
gi|270285405|ref|ZP_06194799.1| hypothetical protein CmurN_03128 [Chlamydia muridarum Nigg]
gi|270289419|ref|ZP_06195721.1| hypothetical protein CmurW_03223 [Chlamydia muridarum Weiss]
gi|301336802|ref|ZP_07225004.1| hypothetical protein CmurM_03185 [Chlamydia muridarum MopnTet14]
gi|7190656|gb|AAF39448.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 510
Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 14/139 (10%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ + + P S PA + I +FY+ + S + +
Sbjct: 329 LGISFICCSLIFPLSSPAL--------ILSFLATLGILFFYTPLLRFFYSPWKLLFGNRW 380
Query: 73 -ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS--FVVIPA 129
+ I+ F +I +I+ F +P+ GLI N+ ++ F++IP
Sbjct: 381 FLFPIRFLFT---TLSISIAAQLFIIFPMIRMFKILPLDGLIYNLFYPTLVVPIFLLIPL 437
Query: 130 GLIAILLMILSLDNIPFGV 148
LL S I + +
Sbjct: 438 SFFIPLLSRFSESYIAWIL 456
>gi|300812164|ref|ZP_07092608.1| putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496849|gb|EFK31927.1| putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 953
Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 58/260 (22%), Gaps = 17/260 (6%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKG-ISAIGYFYSIPKMIYSSESHNTWT 69
+ +A L P S F + + +G + + +
Sbjct: 93 YTIGDVFAYLALLFPTSHLV------FAYQLILLLRLYCVGLAFVYFARHFDFKDGVVLI 146
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + L A + ++ + G A P+ V
Sbjct: 147 GSGVYMVNAYLLYAALAQPMFTTTFILFPLIVVQLERLLQGGS-----AWPLFGVFVWML 201
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
L +L L I + + WGL I V + LL
Sbjct: 202 VSNYYLAFVLGLGAIVYLFLRWGLAYWKKIPFW-----PTINKLFFASLGAVLLSAGLLL 256
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ + YS P LI + L S
Sbjct: 257 PELLAVVNSTRTGSQFANGLTFYPAYYYSLLPKELIDGDNWKLMFWSALGLASIILPALV 316
Query: 250 FIFSQWKSALITPFHEAPHV 269
++F W+ +
Sbjct: 317 YLFRNWRKYRLVAASLLLGA 336
>gi|58337146|ref|YP_193731.1| competence protein [Lactobacillus acidophilus NCFM]
gi|227903722|ref|ZP_04021527.1| competence protein ComEC [Lactobacillus acidophilus ATCC 4796]
gi|58254463|gb|AAV42700.1| competence protein [Lactobacillus acidophilus NCFM]
gi|227868609|gb|EEJ76030.1| competence protein ComEC [Lactobacillus acidophilus ATCC 4796]
Length = 762
Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 56/137 (40%), Gaps = 14/137 (10%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF--GVMAWGLDIIIHIAH 161
F+ I + ++ N++ +P +++V+P I + ++ D + +++ G +I
Sbjct: 376 FYQINLLTVLFNMIIVPYFNWIVMPLTFGGIFIWHINKDLVFLGEHILSGGEKLI----G 431
Query: 162 RISVAH-NEFCIGRIPET-SFVTIVVEFLLMVFCKTNIRH------IGSIMIGITIIILF 213
S + G+I S + +++ L ++ K + +G I++GI I
Sbjct: 432 IFSQSKLGLVIFGQIEWWQSLILLIITGLFIITLKEKPKWKIDSKKLGIILLGIYTIFFS 491
Query: 214 TFPYSFSPDLLISEKGN 230
+ + + G
Sbjct: 492 LIHFPLRGQVTFIDVGQ 508
>gi|326381588|ref|ZP_08203282.1| ComEC/Rec2-like protein [Gordonia neofelifaecis NRRL B-59395]
gi|326199835|gb|EGD57015.1| ComEC/Rec2-like protein [Gordonia neofelifaecis NRRL B-59395]
Length = 540
Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 24/207 (11%), Positives = 58/207 (28%), Gaps = 27/207 (13%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+++ PA T + L P PG F+ + + +
Sbjct: 307 SRRSQALPALGTAVIVVLLLWPQMAVAPG-----FALSVVATLGLVIWSVPIRRALMRRG 361
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL-- 122
+ ++ + LI + + + AN+LA+P++
Sbjct: 362 MPE-------------SVAMLLSMTLAAQVLTTPLLIVLTDTVNLMSVPANLLAVPVVGT 408
Query: 123 -SFVVIPAGLIAILLMILSLDNIPFGVM----AWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+ A +I + + + +I +A R+ + +P
Sbjct: 409 AGLLGTAAAVIGAIGPQFGPGGVVAEFLVRAAGPPTRWLIVVADRLGG--PAWSTLSVPG 466
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ ++ + LL +G
Sbjct: 467 WTVGSVFLVCLLGGLAWRRRGDVGGFW 493
>gi|283766864|gb|ADB28758.1| cytochrome b [Nigeriella excavata]
Length = 228
Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 20/145 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K + P+ I + ++ G P +F A + + Y +S
Sbjct: 62 KSHKPWNIGVIIFLVTMMTAFMGYVLPWG-QMSFW------GATVITNLLSAVPYIGDSM 114
Query: 66 NTWTWKKI----SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP- 120
TW W +++ + + + + GL +N IP
Sbjct: 115 VTWLWGGFSVNNATLNRFYSFHFIFPFVILFLVILHLVFLHEVGSSNPMGLNSNYYKIPF 174
Query: 121 --------ILSFVVIPAGLIAILLM 137
I+ F+++ + L+ I L+
Sbjct: 175 NPYYSIKDIIGFIIMLSMLLMICLL 199
>gi|172041038|ref|YP_001800752.1| hypothetical protein cur_1358 [Corynebacterium urealyticum DSM
7109]
gi|171852342|emb|CAQ05318.1| putative membrane protein [Corynebacterium urealyticum DSM 7109]
Length = 735
Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 24/220 (10%), Positives = 58/220 (26%), Gaps = 21/220 (9%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF--YSIPKMIYSSESHNTWT 69
+ + + P ++ AI +I
Sbjct: 379 ALGGAVLALVLIRPGMAV------EYGLLLSVLATVAIVTAGPRIGRWLILVWGRFTQRR 432
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI---LAIPILSFVV 126
W + + + L + + ++ + + AN+ A+ L +
Sbjct: 433 WAREPRVVEGMLLR-ALAVSFVADVATQPAIVMMTGIVSPAAVPANLAVGWAVAPLMVLA 491
Query: 127 IPAGLIA----ILLMILSLDNIPFGVMAWGLDIIIHIAH-----RISVAHNEFCIGRIPE 177
+ A L+ +L M + L A I +A +
Sbjct: 492 LAACLVGSAALLLGMPVGLAAWLLVPAAPAAWWIHTVAERCSRTWVLHTPGGPGWALAWA 551
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+++ + +++ +T I M+ + I PY
Sbjct: 552 AMLGAMILAAMGVLWWQTIPVLIACAMLLVRIGTWQLGPY 591
>gi|145223250|ref|YP_001133928.1| ComEC/Rec2-related protein [Mycobacterium gilvum PYR-GCK]
gi|315443710|ref|YP_004076589.1| ComEC/Rec2-related protein [Mycobacterium sp. Spyr1]
gi|145215736|gb|ABP45140.1| ComEC/Rec2-related protein [Mycobacterium gilvum PYR-GCK]
gi|315262013|gb|ADT98754.1| ComEC/Rec2-related protein [Mycobacterium sp. Spyr1]
Length = 489
Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 10/145 (6%), Positives = 34/145 (23%), Gaps = 14/145 (9%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F+ +A+ + ++
Sbjct: 330 DVGFALSVSATAALVVIAPAWSRRLTERGWPKPPAD-------------AVSVALAAQLV 376
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-IPFGVMAWGLD 154
+ + + + G++AN+ P++ + + A L + + +
Sbjct: 377 TAPLVAGISGSVSLVGVLANLAVAPVIPPITVFGTAAAALCALWPSGAELLIRFTGPEVW 436
Query: 155 IIIHIAHRISVAHNEFCIGRIPETS 179
++ +A +
Sbjct: 437 WLLTVARWAARMPAATVPVPSGIAG 461
>gi|226360427|ref|YP_002778205.1| ComEC/Rec2-related protein [Rhodococcus opacus B4]
gi|226238912|dbj|BAH49260.1| putative ComEC/Rec2-related protein [Rhodococcus opacus B4]
Length = 520
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILL-MILSLDNIPFGVMAWGLDIIIHIAHRI 163
+ + + ANIL P++ + + + A++ + + + + + W L ++ +A R
Sbjct: 398 GTVSLVSICANILVAPVIGVITVTGAVTALIAGISVPVAEVVVRLTQWPLWWLVTVAERG 457
Query: 164 SVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ + P + V + + ++ + I + +++L+ +
Sbjct: 458 ARIPAASVPVPSGPTGAVVVLGAALAIGAALRSRGTRLVLTGIVVGVLMLWAPVWPS 514
>gi|227509438|ref|ZP_03939487.1| competence protein EC [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227191150|gb|EEI71217.1| competence protein EC [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 717
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 28/252 (11%), Positives = 82/252 (32%), Gaps = 48/252 (19%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
++ I L F ++ + I++ K++
Sbjct: 276 SLTLIVNLFLLPEAMFMMSVQLSYGLAFGLIAS----------------------SKMTY 313
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
++Q+ L + + L+ H + V L N++ +P+ + P + +L
Sbjct: 314 LRQTVLLNLLSL----------PILLFHLYEWHVLSLAVNLMVLPLFGRTIFPLVIFGLL 363
Query: 136 LMILSLDNIPFGVMAWGLDIIIHI----AHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
L +A ++ ++ + + G+ + ++ L+++
Sbjct: 364 ---FGL---VSSKLAIPVEWVLMAFNRSLNMVGRLPGMIVFGKPQLVVVLLMLGLTLIVM 417
Query: 192 F-CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALVDK---NTLISNYS 245
K +R I+ G+ ++ + ++ + + +G+ + + I +
Sbjct: 418 IHSKKRVRGYKVILAGLYLVTFIWIHFPIHGEVSMFDVGQGDSFLIRTPFNQSVTIIDTG 477
Query: 246 NPPSFIFSQWKS 257
+F QW+
Sbjct: 478 GKVTFNQQQWRR 489
>gi|168212919|ref|ZP_02638544.1| competence family protein [Clostridium perfringens CPE str. F4969]
gi|170715535|gb|EDT27717.1| competence family protein [Clostridium perfringens CPE str. F4969]
Length = 551
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 84/261 (32%), Gaps = 50/261 (19%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YDP + + I + P LF F + G I FY
Sbjct: 264 RLFKTYDPLSSISLGAIILLIYKPYN-----LFSMGFLLSFGGTLGIILFYKK------- 311
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + ++G A L+ F + LI+ L PI+
Sbjct: 312 ------LLEGFYMLPPKLNE--YLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVTPII 363
Query: 123 SFVVIP--------AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++ LI +++ ++++ + F + LD ++ + +S
Sbjct: 364 VILLQILLISILIGGNLIGVIVFLINIIFMVFRGILVFLDKVVWVTPYLS---------- 413
Query: 175 IPETSFVTIVVEFLLM-----VFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-----LL 224
P + + + FL + F K I I + I + +F D ++
Sbjct: 414 -PVFAIAYMTM-FLWIYMSIKGFKKFKIGVYLVIPVLILNLYVFGAKIRVVEDKWNKAIV 471
Query: 225 ISEKGNLVALVDKNTLISNYS 245
I VALV+ N+ S
Sbjct: 472 IESGFKKVALVNNNSDYFKKS 492
>gi|156400710|ref|XP_001638935.1| predicted protein [Nematostella vectensis]
gi|156226060|gb|EDO46872.1| predicted protein [Nematostella vectensis]
Length = 1822
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 14/173 (8%), Positives = 58/173 (33%), Gaps = 2/173 (1%)
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
++ + K+ + T + + + + + +
Sbjct: 1523 TLGLVTLGLVTLGLIKLRLVTLGLVTLGLVTLGLFRLDHVTLGLCTLSFV-TLGLGTLSL 1581
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
+ + + +++ + + + ++ GL + L+ L L + + G + +
Sbjct: 1582 VTLGLVTLSFVTLSLVTLGLCTLSLVTLGLCTLSLVTLGLCTLSLVTLGLG-TLTLVPLS 1640
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+++ + + + + + + + ++ IG + +G+ +IL T
Sbjct: 1641 LVTLGLGTLSLVTLGLGTLSLVTLGLVTLSLVTLSLVTIGLVTLGLGTLILVT 1693
Score = 36.3 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
++ + +++ ++ L+ I L+ L L + + G ++ + + +
Sbjct: 1691 LVTLGLVTLSLVKLSLVTIGLVTLGLGTLSLVTLGLGTLGLVTLG------LGTLSLVTL 1744
Query: 176 PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + + + + K ++ IG + +G+ + L T
Sbjct: 1745 GLGTLILVTLGLVTLSLVKLSLVTIGLVTLGLGTLSLVT 1783
>gi|77413582|ref|ZP_00789769.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae 515]
gi|77160348|gb|EAO71472.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae 515]
Length = 742
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 56/172 (32%), Gaps = 5/172 (2%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
S L +F +I L + +P + +L + +
Sbjct: 354 SLTVSVGILPILTYYFSGFQPISIILTALLSFAFDIIFLPLLTVIFVLSPIVKLGCINSL 413
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
L++++ ++ F + + I++ L + R+ ++I T
Sbjct: 414 FEI-LEVLLKWTGQLFPRPLIFGKPSLFLLIVMIIILGLLYDYYHSKCFRYCSLLII-FT 471
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVD--KNTLISNYSNPPSFIF-SQWKS 257
+ + P + +L +G+ + + D T++ + F +WK
Sbjct: 472 LFFITKNPITNEVAILDVGQGDSILVRDWLGKTILIDTGGRVRFEQPEEWKQ 523
>gi|15675328|ref|NP_269502.1| putative competence protein [Streptococcus pyogenes M1 GAS]
gi|71910960|ref|YP_282510.1| COME operon protein 3 [Streptococcus pyogenes MGAS5005]
gi|13622508|gb|AAK34223.1| putative competence protein [Streptococcus pyogenes M1 GAS]
gi|71853742|gb|AAZ51765.1| COME operon protein 3 [Streptococcus pyogenes MGAS5005]
Length = 747
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTGLLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLTNEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|330014487|ref|ZP_08307927.1| arylsulfatase [Klebsiella sp. MS 92-3]
gi|328533014|gb|EGF59788.1| arylsulfatase [Klebsiella sp. MS 92-3]
Length = 546
Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 40/343 (11%), Positives = 94/343 (27%), Gaps = 42/343 (12%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG--------- 89
F+ Y GI FY + S + W I + I +
Sbjct: 20 FACYI-GIFLNLAFYRQVFPLLPVNSLHNWLVFLSMPIVAISVMNILTTLASFLKLDRLV 78
Query: 90 ---TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++++ + I +F + +I NIL + L ++ +L L +
Sbjct: 79 ISLFILLSASAQYFIWNFGVVIDRSMITNILDTTPAESFAL---LSGEMIAVLGLSGVLA 135
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL----MVFCKTNIRHIGS 202
+AW + I + I ++ + I+V L + N + S
Sbjct: 136 VFVAWWVKIRKPATRWRGA---AMRLLNIAVSALLIILVAALFYKDYASVFRNNKELVKS 192
Query: 203 IMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKNTL-------ISNYSNPPSFI 251
+ +I+ + ++ D + I E A++ + S +F
Sbjct: 193 LSPSNSIVAVNSWYAHHRMDNLPLVKIGEDATQKAVMHNAPRKNLTIVVLGETSRADNFS 252
Query: 252 F-------SQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVG 304
+ + + R+ + ++
Sbjct: 253 LGGYSRDTNPLMRQDGVIYFPHTTSCGTATAVSVPCMFSNMPRAHYDEELAHHQEGVLDI 312
Query: 305 CHRSDVIVGVLKRKDMIRLSCQLS-DILITTIRDINTKLCNVS 346
R+ + V + +C +T ++ + +
Sbjct: 313 LQRAGIRVLWNDNDGGCKGACDRVPHQNVTDLKLTGQCIDDEC 355
>gi|283456104|ref|YP_003360668.1| COME operon protein 3 [Bifidobacterium dentium Bd1]
gi|283102738|gb|ADB09844.1| COME operon protein 3 [Bifidobacterium dentium Bd1]
Length = 514
Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 24/223 (10%), Positives = 62/223 (27%), Gaps = 24/223 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ L P + F F+ + I F
Sbjct: 291 LFVGRRGQALSTLCWTAMGVLLIQPY-----MSYSFGFALSCAAVLGIVLF--------- 336
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ W + A + + +PV+ ++AN++ P+
Sbjct: 337 ADRMTDWLKAMLPLFVAQ-----AAGMTIAAQLFTLPLQVLIEPELPVFSILANLVVSPV 391
Query: 122 LSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ F + L IL + + + G I+ ++ + ++
Sbjct: 392 VGFSTLAGLASLALSWILPDIGFVLAWLSGCGTAIMEIVSLHLGSGNHATIPWAGGIPGA 451
Query: 181 VTIVVE----FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ ++ + + R G+ G+ + + P
Sbjct: 452 MLVLAVESVCACSVWLMRRIARRAGTPEQGMPGRRMLSNPMDR 494
>gi|332653431|ref|ZP_08419176.1| DNA internalization-related competence protein ComEC/Rec2
[Ruminococcaceae bacterium D16]
gi|332518577|gb|EGJ48180.1| DNA internalization-related competence protein ComEC/Rec2
[Ruminococcaceae bacterium D16]
Length = 775
Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 11/103 (10%), Positives = 29/103 (28%), Gaps = 5/103 (4%)
Query: 37 FNFSSYYKGISAIGYFYSIP---KMIYSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYG 92
+ ++ I + P ++ W +I+ +
Sbjct: 328 IGLQLSFAAVAGI-FLCGQPLHAALLARIPFRPAKRWTFWWAIQLVPRFVVSTFCTTLGA 386
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
S +F + + ++N+L + + + LI L
Sbjct: 387 SVFTVPLSAIYFQSVSLIAPLSNLLTLWAVGILFGAGVLIGTL 429
>gi|256396184|ref|YP_003117748.1| ComEC/Rec2-related protein [Catenulispora acidiphila DSM 44928]
gi|256362410|gb|ACU75907.1| ComEC/Rec2-related protein [Catenulispora acidiphila DSM 44928]
Length = 516
Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 13/157 (8%), Positives = 41/157 (26%), Gaps = 14/157 (8%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + + + + + ++ + + + +
Sbjct: 360 YGFALSLCATAGLFILAPGWQQALTDRGVPHRIAESLACTAAAETFCLPILVSFTAA--- 416
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDI 155
+ L AN+LA + + + + + L + W D
Sbjct: 417 ----------VTPLSLPANLLAEFCVGPATVLGAVALLSASVWLPLGTAVAWLAQWPTDG 466
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I+ +A S + ++ + L+
Sbjct: 467 IVAVARYGSRLPGATVGWPDGLPGALGLMAVYALVFL 503
>gi|161507342|ref|YP_001577296.1| competence protein ComEC [Lactobacillus helveticus DPC 4571]
gi|160348331|gb|ABX27005.1| Competence protein ComEC [Lactobacillus helveticus DPC 4571]
Length = 762
Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 48/114 (42%), Gaps = 5/114 (4%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G++ I + +P++ + + ++ + + F + + + + L+ +F
Sbjct: 320 GLACILHIIFVPRLFMMAGAILSYLLAEGLQLTNKFG---KMSQSILLNVLLTPLLLFYF 376
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDII 156
+ + ++ N++ +P ++VV+P +LL + L V+ G I
Sbjct: 377 YQVNFLTVLFNLMVVPYFNWVVMPIAFANVLLFGFTKKLAPFFEQVLELGEKAI 430
>gi|332266089|ref|XP_003282048.1| PREDICTED: serine/threonine-protein kinase TAO2 isoform 2 [Nomascus
leucogenys]
Length = 1184
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 46/159 (28%), Gaps = 10/159 (6%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 960 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1019
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 1020 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPIP 1079
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
R + V + + +
Sbjct: 1080 GPRRRNPRTTQHPLALLARVWVLCKGWNWRLARASQGLA 1118
>gi|297621649|ref|YP_003709786.1| putative competence protein [Waddlia chondrophila WSU 86-1044]
gi|297376950|gb|ADI38780.1| putative competence protein [Waddlia chondrophila WSU 86-1044]
Length = 479
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 16/174 (9%), Positives = 47/174 (27%), Gaps = 24/174 (13%)
Query: 35 FDFNFSSYYKGISAIGYFYSI---------PKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
F F + ++I F+ P + I + N +
Sbjct: 308 FSIGFVFSFSVTASILLFFPSTLKLLNAIFPSREAHVLKQMGIADQHCYLIVTAAKNTLA 367
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
+ + +A + F P+ L+ N++ ++S + L + + L+
Sbjct: 368 LALAV--NLTAIPLTLFFFGKFPLISLLCNLVVPLMVSISMFLFILGIFIPWLHGLNQFL 425
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIG---RIPETSFVTIVVEFLLMVFCKTN 196
++ + + + + + + + L+
Sbjct: 426 VRIL----------LDFVDQLPAPLHVHWRLPLNKPALLGWLTAAALLGIWGWR 469
>gi|306836677|ref|ZP_07469642.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304567449|gb|EFM43049.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 331
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 21/178 (11%), Positives = 46/178 (25%), Gaps = 17/178 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F F+ I + + + +
Sbjct: 168 FGFALSCAATFGIVMLSPLIYSHLAVTGWPAIFLR-------------AIAVAIAADILT 214
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP---FGVMAWGL 153
+ + V ++AN+L P + + + L AI + L I ++
Sbjct: 215 LPLIALMSGEVSVVSVLANVLVAPATAPITVVGLLAAIAAQLGPLSIIAAGLLKLIEPAA 274
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
I IAH ++ I P + + +++ + + G I
Sbjct: 275 WWINTIAHGVASLP-VVTITAHPLFTLLAYGWVIAGLLYHRPWLTLAGVIACLGAFAA 331
>gi|87309480|ref|ZP_01091615.1| potassium efflux system KefA [Blastopirellula marina DSM 3645]
gi|87287788|gb|EAQ79687.1| potassium efflux system KefA [Blastopirellula marina DSM 3645]
Length = 1247
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 19/181 (10%)
Query: 33 GLFDFNFSSYYKGI----SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
DF Y I + FY ++ + WK++S ++ + I +
Sbjct: 546 AFNDFKRRPYVFLITAAFFGVLLFYKRRMRHRLNDIGSELAWKRLSPLRMTTEALIMTTL 605
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPI--LSFVVIPAGLIAILLMILSLDNIPF 146
S + + + +A L+ +FV+ P ++ L + F
Sbjct: 606 TALIWPSIFLAIGYFLSLLRAESAMAAALSAGFYATTFVLFPLEMLKQLARPNGVMAAHF 665
Query: 147 GV-------MAW---GLDIIIHIAHRI---SVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
V + W L ++ IA I + H+ + + I + + +V
Sbjct: 666 RVPDEVTKDIRWTSGSLKYLLPIAAGINAAAEEHSGSAVDDPLARAVFIISIALVSVVLW 725
Query: 194 K 194
+
Sbjct: 726 R 726
>gi|328776644|ref|XP_001120287.2| PREDICTED: probable
dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichyl-alpha-1,
6-mannosyltransferase-like [Apis mellifera]
Length = 922
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 72/245 (29%), Gaps = 37/245 (15%)
Query: 30 AFPGLFDFNFSSYYKGISAIG--YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN 87
A +F F+ ++ I+ + Y + + + + + +KQ + +
Sbjct: 105 ALQSIFGLQFTKWFVAITVTQYHFMYYLSRTLPNIMTMPLVLLALYGWLKQ---SHVIFI 161
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANI-LAIPILSFVVIPAGLIAI------------ 134
+ + + + + IAN L I L + +PAG+ +
Sbjct: 162 WSSAAAIIIFRAELAMLLGLFLLYDIANKKLTILRLFKIAVPAGIFFLTLTTAIDSIFWK 221
Query: 135 -LLMILSLDNIPFGVM----AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
LL ++ WG + + S S+ I + L
Sbjct: 222 RLLWPEGEVFYFNTILNKSSEWGTSPFLW--YFYSALPRGL------AFSYFLIPLGML- 272
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP- 248
+R + I + F + + N+ A V + + N + P
Sbjct: 273 ---WDARVRTLTIPGIAFVALFSFLPHKELRFIIYVFPLLNVSAAVVCHRIWENRAKSPW 329
Query: 249 -SFIF 252
F+
Sbjct: 330 NGFLA 334
>gi|23380362|gb|AAN18286.1| putative ABC transporter [Streptococcus equi]
Length = 372
Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 19/154 (12%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
Y + + + I M+ N + + + +F IG A
Sbjct: 226 LSYVCVGIVAFAIQIVIMLGLLRVANVSFYIPTAIVLLTFFLYSLLAIGFGLMIGAVS-- 283
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL--DIIIH 158
+AN+ +V+P ++A L LS+ + L ++
Sbjct: 284 ----KNAQQSSQLANL--------IVMPTSMLAGCLWPLSITPPYMQAIGKLLPQHWVLT 331
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I IS N +G V LMV
Sbjct: 332 I---ISTFQNGGNLGEAWPYFLALFVAAMTLMVL 362
>gi|332266087|ref|XP_003282047.1| PREDICTED: serine/threonine-protein kinase TAO2 isoform 1 [Nomascus
leucogenys]
Length = 1235
Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 46/159 (28%), Gaps = 10/159 (6%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1011 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1070
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 1071 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPIP 1130
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
R + V + + +
Sbjct: 1131 GPRRRNPRTTQHPLALLARVWVLCKGWNWRLARASQGLA 1169
>gi|71903803|ref|YP_280606.1| ComE operon protein 3 [Streptococcus pyogenes MGAS6180]
gi|71802898|gb|AAX72251.1| ComE operon protein 3 [Streptococcus pyogenes MGAS6180]
Length = 628
Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 201 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 247
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 248 ---LPFLLFYFSSFNPMSMVLTGLLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 304
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 305 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 361
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 362 VKYPLTNEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 418
>gi|169343716|ref|ZP_02864715.1| competence family protein [Clostridium perfringens C str. JGS1495]
gi|169298276|gb|EDS80366.1| competence family protein [Clostridium perfringens C str. JGS1495]
Length = 551
Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 28/170 (16%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YDP + + I + P LF F + G I FY
Sbjct: 264 RLFKTYDPLSSISLGAVILLIYKPYN-----LFSMGFLLSFGGTLGIILFYKK------- 311
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + ++G A L+ F + LI+ L PI+
Sbjct: 312 ------LLEGFYMLPPKLNE--YLSLGLSAQAFIYPILVIAFGKFSINFLISTFLVTPII 363
Query: 123 SFVVIP--------AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
++ LI I++ ++++ + F + LD ++ + +S
Sbjct: 364 VILLQILLISILIGGNLIGIIVFLINIIFMVFRGILVFLDKVVWVTPYLS 413
>gi|119505774|ref|ZP_01627842.1| DNA internalization-related competence protein ComEC/Rec2 [marine
gamma proteobacterium HTCC2080]
gi|119458408|gb|EAW39515.1| DNA internalization-related competence protein ComEC/Rec2 [marine
gamma proteobacterium HTCC2080]
Length = 709
Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 42/114 (36%), Gaps = 7/114 (6%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
I ++ S+ T K ++ L + + + + F
Sbjct: 323 AILGRSFWLSMAATGILIGVVTKLTPKNFPHLRGWLLRIMATQVVLVLFM--APVTVFWF 380
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILS----LDNIPFGVMAWGL 153
+ + +IAN+L +P ++ +++P L+ I+ +M+ L + G+
Sbjct: 381 GQMTLAAIIANVLLVPFIASLMVPLALVGIVWVMLWGSVDNLAWQSAVAVGMGV 434
>gi|307709137|ref|ZP_07645596.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus mitis SK564]
gi|307620083|gb|EFN99200.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus mitis SK564]
Length = 746
Score = 37.9 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 66/208 (31%), Gaps = 11/208 (5%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGSASA 96
F+ F +P ++ + + I ++ ++A + S
Sbjct: 310 FALTVF-----VLFIIMPNFFLTAGGVLSCAYAFILTMTSKEEEGLKAIVRESLVISLGI 364
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
L +F + ++ + + FV +P I L L + W L+ +
Sbjct: 365 LPILSFYFAEFQPWSILLTFVFSFLFDFVFLPLLSILFALSFLYPVIQLNFIFEW-LEGM 423
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTF 215
I + +++ G+ + +++ L+ + NI R ++ + L
Sbjct: 424 IRLVSQVASRP--LVFGQPNAWLLILLLISLALVYDLRKNIKRLTVLSLLITGLFFLTKH 481
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISN 243
P +L +G + L D
Sbjct: 482 PLENEITMLDVGQGESIFLRDVTGKTIL 509
>gi|84495883|ref|ZP_00994737.1| putative integral membrane protein [Janibacter sp. HTCC2649]
gi|84382651|gb|EAP98532.1| putative integral membrane protein [Janibacter sp. HTCC2649]
Length = 793
Score = 37.9 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 24/262 (9%), Positives = 75/262 (28%), Gaps = 30/262 (11%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S +++ P + + P F F+ + F
Sbjct: 322 MSRSRRAAGLPVLAGAIVVVLVVDPW-----MSRSFGFALSALATLGLLLFTRPW----- 371
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ +++ + + I A + ++ + + G+ AN++A P+
Sbjct: 372 GDAIAQRLPPRLAFMGPAIA------IPVAAQAMCAPLIVVLQGSVSIVGIAANLVAAPL 425
Query: 122 LSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
++ I + A++ ++ + + A I A ++
Sbjct: 426 VAPATIAGVVAALVSVVADAPARLVGWLGAVPTLGIARTARVMADVPGGTLPWPDGAPGA 485
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS-------------E 227
V + +L++ + + + ++I+ P +++
Sbjct: 486 VLLAGLTVLLLLMGRWLGRFALVKPLVAVLIVALTAAMTIPTRVVTWPPEGWRIAFCDVG 545
Query: 228 KGNLVALVDKNTLISNYSNPPS 249
+G+ + P
Sbjct: 546 QGDAAVVRTGPGRALVVDAGPE 567
>gi|225869974|ref|YP_002745921.1| ABC-2 type transporter protein [Streptococcus equi subsp. equi
4047]
gi|225699378|emb|CAW92811.1| ABC-2 type transporter protein [Streptococcus equi subsp. equi
4047]
Length = 372
Score = 37.9 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 19/154 (12%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
Y + + + I M+ N + + + +F IG A
Sbjct: 226 LSYVCVGIVAFAIQIVIMLGLLRVANVSFYIPTAIVLLTFFLYSLLAIGFGLMIGAVS-- 283
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL--DIIIH 158
+AN+ +V+P ++A L LS+ + L ++
Sbjct: 284 ----KNAQQSSQLANL--------IVMPTSMLAGCLWPLSITPPYMQAIGKLLPQHWVLT 331
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I IS N +G V LMV
Sbjct: 332 I---ISTFQNGGNLGEAWPYFLALFVAAMTLMVL 362
>gi|254282382|ref|ZP_04957350.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium NOR51-B]
gi|219678585|gb|EED34934.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium NOR51-B]
Length = 747
Score = 37.9 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 32/243 (13%), Positives = 71/243 (29%), Gaps = 31/243 (12%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + P PGL + + + P +
Sbjct: 313 PVNGLLFAVVLILVLNPFAALSPGL-----WMSVTATALLLWLSQRPWAGGLAAR----- 362
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ S F + +I ++L P+++ V+P
Sbjct: 363 ---------------LFLLQIVMSIVLLPMSWFWFGGGSLGAIITHLLVNPLITVWVLPL 407
Query: 130 GLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVE 186
GL+ ++L + + + W + +++ H + E+ I R S +
Sbjct: 408 GLLGVVLAPVMEVSAAMLWRAALWPVPLMLDALHWMDQHLGEWVWIERHLSFSTALTALG 467
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN 246
LL+ + R + ++ ++ T P +L +G V + + N Y
Sbjct: 468 GLLIFV--RHTRWLAVALLIFMSFVVRTPPPLARLSVLDVGQGTAV-VFEANGRHLLYDT 524
Query: 247 PPS 249
Sbjct: 525 GGG 527
>gi|94988824|ref|YP_596925.1| COME operon protein 3 [Streptococcus pyogenes MGAS9429]
gi|94542332|gb|ABF32381.1| COME operon protein 3 [Streptococcus pyogenes MGAS9429]
Length = 747
Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTGLLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLTNEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|119491093|ref|ZP_01623251.1| 44.5 kD bacteriochlorophyll synthase subunit [Lyngbya sp. PCC 8106]
gi|119453638|gb|EAW34798.1| 44.5 kD bacteriochlorophyll synthase subunit [Lyngbya sp. PCC 8106]
Length = 493
Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 48/167 (28%), Gaps = 6/167 (3%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
L + GLF + + +I F + + + + F
Sbjct: 276 LRILTASRQTGLF-----FSFLLVMSISLFMQDAVLEPYGGEVFGMCISETTQLNAFFGM 330
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
A I T G K+ + G I + F+ P L LL+ +
Sbjct: 331 GTLAGIATTGFLITPRLGKKNTVKVGCIGTIVCLSLFIASGFIADPGMLKGGLLL-FGVA 389
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
+ A GL + + A + + + TI+ +L
Sbjct: 390 SGVLTAGAIGLMLDLTAAETAGTFIGAWGLAQAMARGLATILGGAVL 436
>gi|282889886|ref|ZP_06298424.1| hypothetical protein pah_c005o019 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500209|gb|EFB42490.1| hypothetical protein pah_c005o019 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 540
Score = 37.9 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 37/115 (32%), Gaps = 11/115 (9%)
Query: 37 FNFSSYYKGISAIGYFYS----IPKMIYSSESHNTWTWKKISSIKQSFLNEI---RANIG 89
F ++I F + + I+ +++ + + +
Sbjct: 362 LAFQFSILTTASILLFMPVMTTLLEKIWPKRPLKEAVLMRLTDQHGYVILSMFRDALALC 421
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+ A + +FH P+ ++ N+ F+V A + ++ M + L
Sbjct: 422 LSVNLIALPLTLFYFHKFPLLSILYNLF----FPFLVSIAMFLLVISMGIGLIWP 472
>gi|229820230|ref|YP_002881756.1| ComEC/Rec2-related protein protein [Beutenbergia cavernae DSM
12333]
gi|229566143|gb|ACQ79994.1| ComEC/Rec2-related protein protein [Beutenbergia cavernae DSM
12333]
Length = 821
Score = 37.9 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 48/179 (26%), Gaps = 22/179 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + PA + L+ P F F+ + + +
Sbjct: 325 FLLRRPSRALPALAVAVIVLLLADPWASRS-----FGFALSVCATAGLVLLAGPWTRALA 379
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + G +P YG++AN L P+
Sbjct: 380 SRMPTPLAAALAIPAAAQAACAPVVVLLDPG--------------VPAYGILANALVAPV 425
Query: 122 LSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
++ V + L+A L L ++ V G + +A +++A
Sbjct: 426 VAPVTV-LTLLATLAGPWWPGLAHVGLVVAQAGTWWVERVATWVALAPGARLPWPGGVG 483
>gi|256545392|ref|ZP_05472755.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
gi|256398953|gb|EEU12567.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
Length = 726
Score = 37.9 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 22/152 (14%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ + L F +F + + + PK++ S
Sbjct: 299 IVAMLLILFANPFAILNSGFILSFLAGFA------IYEIYPKLVRGKN---------FSY 343
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF-VVIPAGLIAI 134
+K+ + + + + +I ++ + AN L +PI S + I G+I +
Sbjct: 344 LKKYIIFIL------CLQITLAFHVIYYYGYFNLLNFFANFLVVPIFSISMYIIFGIIIL 397
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
+ F ++ + + I+ IA+ +S
Sbjct: 398 YPIFGGFLAGFFFILDFLIKSIMDIAYFLSNF 429
>gi|302528891|ref|ZP_07281233.1| predicted protein [Streptomyces sp. AA4]
gi|302437786|gb|EFL09602.1| predicted protein [Streptomyces sp. AA4]
Length = 792
Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 23/243 (9%), Positives = 67/243 (27%), Gaps = 21/243 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ ++ PA + P +F F+ + +
Sbjct: 320 LALGRRGSALPALAFAVCVLVAWDP-----TMAGNFGFALSVLATAGLVLLAPRWADSLV 374
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + + + + + ++ N+LA P+
Sbjct: 375 RKGVPPGYAEGL-------------AVPLAAFVVTAPVIAGMAGTVSLVSVVTNVLAAPV 421
Query: 122 LSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
++ V + G++A ++ ++ +I +A + A
Sbjct: 422 VAPVTV-LGVLATVVGPWWPGAGHLLIHAAEPEAQWLITVARHGARAPGAALSWPGGWWG 480
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ +++V R + IG+ +++L P + +V
Sbjct: 481 GLCAAALLVVVVVAARFRRLRLLVAIGLVLVLLTVVPAKVLAPGWPPDGWAMVECDVGQG 540
Query: 240 LIS 242
Sbjct: 541 DAV 543
>gi|254429406|ref|ZP_05043113.1| hypothetical protein ADG881_2636 [Alcanivorax sp. DG881]
gi|196195575|gb|EDX90534.1| hypothetical protein ADG881_2636 [Alcanivorax sp. DG881]
Length = 431
Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 25/233 (10%), Positives = 57/233 (24%), Gaps = 26/233 (11%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
F + + +S ++ N + + Q L + +
Sbjct: 129 SYFLVERQPWLAAVLTGLLVFSWLLLLTEGIWQNKVIGTRFDGLPQGMLKLLLQAVHQEA 188
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP--AGLIAILLMILSLDNIPFG--- 147
+ F++ + Y ++ ++ P L +
Sbjct: 189 FFFSLPFVLLQWSGGAEYIFFTTLVVSAAAISIIDPVYFWLARHRALYFGFHAWALFVAL 248
Query: 148 ------VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
+ WG D + A ++ R + R +G
Sbjct: 249 LVLLPLIFHWGTDSALAWAGWLTALFALPSFWRFGGP---------------RKWFRWLG 293
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
I++ I + + P L +S + VAL + F +
Sbjct: 294 LILVSCLIALSPRWLAPLVPPLTLSLQERAVALSFNRAERKPLVSGEVFSADE 346
>gi|227504490|ref|ZP_03934539.1| competence protein ComE family protein [Corynebacterium striatum
ATCC 6940]
gi|227198907|gb|EEI78955.1| competence protein ComE family protein [Corynebacterium striatum
ATCC 6940]
Length = 483
Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 27/227 (11%), Positives = 58/227 (25%), Gaps = 24/227 (10%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ + +P ++ I L S F F+ + I + +
Sbjct: 244 SSRMEPMH-GLSLAIIVLLFIDSELCSS----FGFALSVVATAGIVVVSPLLYRHLAVIG 298
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ + + + V ++AN+L P +
Sbjct: 299 WPDIFIR-------------ALAVAIAADLVTMPIVALMAGEVSVVSVLANVLVAPATAP 345
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWG---LDIIIHIAHRISVAHNEFCIGRIPETSFV 181
V I + AI + L + G++A I IAH + V
Sbjct: 346 VTILGLIAAIFAQLGPLSVLGAGLLAVAEPFTWWINTIAHGCTGLPLNTV---AASPFLV 402
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEK 228
+ +++ +I + + P + E
Sbjct: 403 LLAYGWVVAGIIYRRPLLTLLCVIAVLVPRHLETPQKPVHVVATEED 449
>gi|225869059|ref|YP_002745007.1| ABC transporter [Streptococcus equi subsp. zooepidemicus]
gi|225702335|emb|CAX00146.1| ABC-2 type transporter protein [Streptococcus equi subsp.
zooepidemicus]
Length = 372
Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 19/154 (12%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
Y + + + I M+ N + + + +F IG A
Sbjct: 226 LSYVCVGIVAFAIQIVIMLGLLRVANVSFYIPTAIVLLTFFLYSLLAIGFGLMIGAVS-- 283
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL--DIIIH 158
+AN+ +V+P ++A L LS+ + L ++
Sbjct: 284 ----KNAQQSSQLANL--------IVMPTSMLAGCLWPLSITPPYMQAIGKLLPQHWVLT 331
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I IS N +G V LMV
Sbjct: 332 I---ISTFQNGGNLGEAWPYFLALFVAAMTLMVL 362
>gi|269127473|ref|YP_003300843.1| DNA internalization-related competence protein ComEC/Rec2
[Thermomonospora curvata DSM 43183]
gi|268312431|gb|ACY98805.1| DNA internalization-related competence protein ComEC/Rec2
[Thermomonospora curvata DSM 43183]
Length = 792
Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 31/102 (30%), Gaps = 3/102 (2%)
Query: 125 VVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
V + G +A ++ L +L + + II +A + + + VT
Sbjct: 438 VAMLLGALAAVIAPLWLTLARLVVWPAGLAVGWIIGVARTAAAVPHATVPWQDGFLGAVT 497
Query: 183 IVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
+ + + + I G ++ +P
Sbjct: 498 LTFVLVAGCLVLRKRLLLIAVAAAGTGALLAGAAARVTAPAW 539
>gi|31793593|ref|NP_856086.1| hypothetical protein Mb2437c [Mycobacterium bovis AF2122/97]
gi|31619186|emb|CAD97298.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
Length = 523
Score = 37.9 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 15/185 (8%), Positives = 48/185 (25%), Gaps = 19/185 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + + + P D F+ A+ +
Sbjct: 311 RRRQAIPALSGSVLVLLAAAPHLAV-----DIGFALSVAATGALVVIAPVWSRRLVDRGC 365
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
++ + L G + + ++AN+ +++ +
Sbjct: 366 PKVLADALAVAAAAQLVTAPLVAAISG-------------RVSLVAVVANLAVAAVIAPI 412
Query: 126 VIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ + A+L++ + + ++ +AH S + +
Sbjct: 413 TVLGSVAAVLVVPWPAGAQVLIRFTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVG 472
Query: 185 VEFLL 189
+
Sbjct: 473 GATVF 477
>gi|46191300|ref|ZP_00206750.1| COG0658: Predicted membrane metal-binding protein [Bifidobacterium
longum DJO10A]
Length = 360
Score = 37.9 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 16/150 (10%), Positives = 41/150 (27%), Gaps = 15/150 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+ F+ + I F + ++ + +
Sbjct: 169 YGFALSSAAVLGIVLFAGRLAGAFE------------RAMPHGIAEMMAMTV--AAQLFT 214
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ +P+ + AN+L P + + + L + + +WG +
Sbjct: 215 LPIQVLMEPELPLLSVPANLLVSPFVGLATMAGLMALACAWCEPWLAGVFAWISSWGTLV 274
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ +A + + + T V IV
Sbjct: 275 MERVALWLGGSTMAVIPWKDGVTGAVLIVA 304
>gi|319744774|gb|EFV97114.1| competence protein ComEC [Streptococcus agalactiae ATCC 13813]
Length = 745
Score = 37.9 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 58/176 (32%), Gaps = 5/176 (2%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
A S L +F +I L + +P + +L + +
Sbjct: 353 LAIESLTVSVGILPILTYYFSGFQPISIILTALLSFAFDIIFLPLLTVIFVLSPIVKLSC 412
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ L++++ ++ F + + I++ L + R+ ++
Sbjct: 413 INSLFEI-LEVLLKWTGQLFPRPLIFGKPSLFLLIVMIIILGLLYDYYHSKCFRYCSLLI 471
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVD--KNTLISNYSNPPSFIF-SQWKS 257
I T+ + P + +L +G+ + + D T++ + F +WK
Sbjct: 472 I-FTLFFITKNPITNEVAILDVGQGDSILVRDWLGKTILIDTGGRVRFEQPEEWKQ 526
>gi|195977639|ref|YP_002122883.1| Streptolysin S export transmembrane permease SagI [Streptococcus
equi subsp. zooepidemicus MGCS10565]
gi|195974344|gb|ACG61870.1| Streptolysin S export transmembrane permease SagI [Streptococcus
equi subsp. zooepidemicus MGCS10565]
Length = 372
Score = 37.9 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 19/154 (12%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
Y + + + I M+ N + + + +F IG A
Sbjct: 226 LSYVCVGIVAFAIQIVIMLGLLRVANVSFYIPTAIVLLTFFLYSLLAIGFGLMIGAVS-- 283
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL--DIIIH 158
+AN+ +V+P ++A L LS+ + L ++
Sbjct: 284 ----KNAQQSSQLANL--------IVMPTSMLAGCLWPLSITPPYMQAIGKLLPQHWVLT 331
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I IS N +G V LMV
Sbjct: 332 I---ISTFQNGGNLGEAWPYFLALFVAAMTLMVL 362
>gi|148643525|ref|YP_001274038.1| multidrug efflux permease, AraJ [Methanobrevibacter smithii ATCC
35061]
gi|148552542|gb|ABQ87670.1| multidrug efflux permease, AraJ [Methanobrevibacter smithii ATCC
35061]
Length = 463
Score = 37.9 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 53/131 (40%), Gaps = 12/131 (9%)
Query: 33 GLFDFNFS----SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
F + F+ + I+A+G + I + Y + ++ + + I + I
Sbjct: 209 SAFMYGFTELHTLTGQAITAVGVIFLIIFIYYELKQKYPIFNVRLYKNHKFLSSNIASVI 268
Query: 89 GTYGSASASIFLIKHFHCIPVY-----GLIANILAIPILSFVVIP-AGLIAILLMILSLD 142
S S + HF I + GLI ++++PI+ +V P +G ++ L+ L
Sbjct: 269 SYISIFSVSTIINYHFQYILGWNAQMTGLI--LISMPIMQAIVTPQSGKLSDLINPQKLS 326
Query: 143 NIPFGVMAWGL 153
+ G+ +
Sbjct: 327 ALGMGLATIAI 337
>gi|76787621|ref|YP_329529.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae A909]
gi|76562678|gb|ABA45262.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae A909]
Length = 745
Score = 37.9 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 57/172 (33%), Gaps = 5/172 (2%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
S L +F +I L + +P + +L + + +
Sbjct: 357 SLTVSVGILPILTYYFSGFQPISIILTALLSFAFDIIFLPLLTVIFVLSPIVKLSCINSL 416
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
L++++ ++ F + + I++ L + R+ ++I T
Sbjct: 417 FEI-LEVLLKWTGQLFPRPLIFGKPSLFLLIVMIIILGLLYDYYHSKCFRYCSLLII-FT 474
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVD--KNTLISNYSNPPSFIF-SQWKS 257
+ + P + +L +G+ + + D T++ + F +WK
Sbjct: 475 LFFITKNPITNEVAILDVGQGDSILVRDWLGKTILIDTGGRVRFEQPEEWKQ 526
>gi|25010857|ref|NP_735252.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae NEM316]
gi|77411338|ref|ZP_00787686.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae CJB111]
gi|23095236|emb|CAD46446.1| Unknown [Streptococcus agalactiae NEM316]
gi|77162598|gb|EAO73561.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae CJB111]
Length = 742
Score = 37.9 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 57/172 (33%), Gaps = 5/172 (2%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
S L +F +I L + +P + +L + + +
Sbjct: 354 SLTVSVGILPILTYYFSGFQPISIILTALLSFAFDIIFLPLLTVIFVLSPIVKLSCINSL 413
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
L++++ ++ F + + I++ L + R+ ++I T
Sbjct: 414 FEI-LEVLLKWTGQLFPRPLIFGKPSLFLLIVMIIILGLLYDYYHSKCFRYCSLLII-FT 471
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVD--KNTLISNYSNPPSFIF-SQWKS 257
+ + P + +L +G+ + + D T++ + F +WK
Sbjct: 472 LFFITKNPITNEVAILDVGQGDSILVRDWLGKTILIDTGGRVRFEQPEEWKQ 523
>gi|22536946|ref|NP_687797.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae 2603V/R]
gi|22533799|gb|AAM99669.1|AE014227_13 DNA internalization-related competence protein ComEC/Rec2
[Streptococcus agalactiae 2603V/R]
Length = 745
Score = 37.5 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 57/172 (33%), Gaps = 5/172 (2%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
S L +F +I L + +P + +L + + +
Sbjct: 357 SLTVSVGILPILTYYFSGFQPISIILTALLSFAFDIIFLPLLTVIFVLSPIVKLSCINSL 416
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
L++++ ++ F + + I++ L + R+ ++I T
Sbjct: 417 FEI-LEVLLKWTGQLFPRPLIFGKPSLFLLIVMIIILGLLYDYYHSKCFRYCSLLII-FT 474
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVD--KNTLISNYSNPPSFIF-SQWKS 257
+ + P + +L +G+ + + D T++ + F +WK
Sbjct: 475 LFFITKNPITNEVAILDVGQGDSILVRDWLGKTILIDTGGRVRFEQPEEWKQ 526
>gi|194468432|ref|ZP_03074418.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus reuteri 100-23]
gi|194453285|gb|EDX42183.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus reuteri 100-23]
Length = 709
Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 48/137 (35%), Gaps = 8/137 (5%)
Query: 40 SSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIF 99
+ I + + + ++ + + + F + N+ + S + ++
Sbjct: 259 WALSLLIGLVIDPLILLTLGGQLSYLLSFILQVLPESVRGFKQSLLLNLISLPSLLSYVY 318
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
+ + + L IP+ S VV PA L+ L + ++ GL +I
Sbjct: 319 ------EVHLLSFGISYLIIPLFSTVVFPAVLVGALSLKFF--EPLTYLINAGLKCFQYI 370
Query: 160 AHRISVAHNEFCIGRIP 176
+R+S G+ P
Sbjct: 371 LNRLSDFPGMIHFGKPP 387
>gi|157056516|gb|ABV02149.1| NADH dehydrogenase subunit 4 [Friesea grisea]
Length = 457
Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 8/197 (4%)
Query: 58 MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
+I + W ++ ++ + + + + L +F+ + ++ + N+
Sbjct: 123 LIPTLFIIMGWGYQP-ERLQAGVYFMLYTLLASLPLLIMILSLSNNFYSLSMFNSLTNLF 181
Query: 118 ------AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
L F+++ + L M L+ +P + + + +A +
Sbjct: 182 LFETNQYFAGLMFIMLILAFLVKLPMYLTHLWLPKAHLEAPVTGSMILAGVLLKLGGYGL 241
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT-IIILFTFPYSFSPDLLISEKGN 230
+ + +T F +V L + + IG I + + L + L+I
Sbjct: 242 MRIVGKTYFSLNMVGGLFLSLSLVGMIIIGLICCRLNDLKALVAYSSVAHMGLVICGILT 301
Query: 231 LVALVDKNTLISNYSNP 247
V+ L+ S+
Sbjct: 302 GVSWGLNGGLMMMISHG 318
>gi|171742869|ref|ZP_02918676.1| hypothetical protein BIFDEN_01985 [Bifidobacterium dentium ATCC
27678]
gi|171278483|gb|EDT46144.1| hypothetical protein BIFDEN_01985 [Bifidobacterium dentium ATCC
27678]
Length = 576
Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 24/223 (10%), Positives = 62/223 (27%), Gaps = 24/223 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ L P + F F+ + I F
Sbjct: 353 LFVGRRGQALSTLCWTAMGVLLIQPY-----MSYSFGFALSCAAVLGIVLF--------- 398
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ W + A + + +PV+ ++AN++ P+
Sbjct: 399 ADRMTDWLKAMLPLFVAQ-----AAGMTIAAQLFTLPLQVLIEPELPVFSILANLVVSPV 453
Query: 122 LSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ F + L IL + + + G I+ ++ + ++
Sbjct: 454 VGFSTLAGLASLALSWILPDIGFVLAWLSGCGTAIMEIVSLHLGSGNHATIPWAGGIPGA 513
Query: 181 VTIVVE----FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ ++ + + R G+ G+ + + P
Sbjct: 514 MLVLAVESVCACSVWLMRRIARRAGTPEQGMPGRRMLSNPMDR 556
>gi|38234341|ref|NP_940108.1| hypothetical protein DIP1770 [Corynebacterium diphtheriae NCTC
13129]
gi|38200604|emb|CAE50300.1| Putative membrane protein [Corynebacterium diphtheriae]
Length = 557
Score = 37.5 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 22/195 (11%), Positives = 54/195 (27%), Gaps = 18/195 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F F+ + I Y + + I S
Sbjct: 304 FGFALSVAATAGIITLYPAIYRSLAIVDVTPNIVVRA------------LAIAIAADIST 351
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
++ I ++AN+LA P++ + + L + + + + ++ D I
Sbjct: 352 MPIVMLMSGKISAVSVLANLLAAPVVPIITLIGLLAVLSSWLPVVPSFLINIIEPCADWI 411
Query: 157 IHIAHRISVAHNEFCIGRIP---ETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+A + P S + ++ + ++ K + + I
Sbjct: 412 GLVATMLGGHTWTSIDQPFPESRGLSTLWAILGAMWLLTGFVVKPKLTLATISCAMVATI 471
Query: 211 ILFTFPYSFSPDLLI 225
P + +L +
Sbjct: 472 WWQHTPTVSTTELNV 486
>gi|330940143|ref|XP_003305922.1| hypothetical protein PTT_18898 [Pyrenophora teres f. teres 0-1]
gi|311316847|gb|EFQ85982.1| hypothetical protein PTT_18898 [Pyrenophora teres f. teres 0-1]
Length = 622
Score = 37.5 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 13/114 (11%), Positives = 35/114 (30%), Gaps = 2/114 (1%)
Query: 199 HIGSIMIGITIIILFT--FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWK 256
G + G I + + ++ + G + S+ F+ S++
Sbjct: 135 WAGQLGDGRAISLFESTNPATGTRYEVQLKGAGRTPYSRSADGRAVLRSSIREFVVSEYL 194
Query: 257 SALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
+A+ P A + + + + + + + +F + R D
Sbjct: 195 NAIGIPSTRALALTLNNGSKIMRERTEPGAIVTRFAQSWIRFGTFDLQRIRGDR 248
>gi|222444981|ref|ZP_03607496.1| hypothetical protein METSMIALI_00597 [Methanobrevibacter smithii
DSM 2375]
gi|222434546|gb|EEE41711.1| hypothetical protein METSMIALI_00597 [Methanobrevibacter smithii
DSM 2375]
Length = 463
Score = 37.5 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 53/131 (40%), Gaps = 12/131 (9%)
Query: 33 GLFDFNFS----SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
F + F+ + I+A+G + I + Y + ++ + + I + I
Sbjct: 209 SAFMYGFTELHTLTGQAITAVGAIFLIIFIYYELKQKYPIFNVRLYKNHKFLSSNIASVI 268
Query: 89 GTYGSASASIFLIKHFHCIPVY-----GLIANILAIPILSFVVIP-AGLIAILLMILSLD 142
S S + HF I + GLI ++++P++ +V P +G ++ L+ L
Sbjct: 269 SYISIFSVSTIINYHFQYILGWNAQMTGLI--LISMPVMQAIVTPQSGKLSDLINPQKLS 326
Query: 143 NIPFGVMAWGL 153
+ G+ +
Sbjct: 327 ALGMGLATIAI 337
>gi|242211450|ref|XP_002471563.1| predicted protein [Postia placenta Mad-698-R]
gi|220729335|gb|EED83211.1| predicted protein [Postia placenta Mad-698-R]
Length = 1459
Score = 37.5 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 16/176 (9%), Positives = 41/176 (23%), Gaps = 14/176 (7%)
Query: 226 SEKG-NLVALVDKNTLISNYSNPPSFIFSQWK----SALITPFHEAPHVQKEDLQEKNQS 280
+ G +A + + + + E + D+ S
Sbjct: 613 AGDGEQAMARRHGSRVWMGRDRGLRWASDESLVLAARRRGRWGAEHGDGRMWDVACVRSS 672
Query: 281 SLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLS--------DILI 332
E + +K +S+ + G ++ C + +I +
Sbjct: 673 VGDETNGRQRRKKCRIPARSWEEARGPAGPRCGAAPSREDRDRECGGAQTGDGKPLEIRV 732
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
R + L + ++ + + + A E P
Sbjct: 733 GRRRPKAADGIAGGEAASERALWTR-AVAVWAGQNAKAGSGDWAADEEAGEPSERP 787
>gi|70725679|ref|YP_252593.1| hypothetical protein SH0678 [Staphylococcus haemolyticus JCSC1435]
gi|68446403|dbj|BAE03987.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 415
Score = 37.5 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 50/156 (32%), Gaps = 7/156 (4%)
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
+++ + + I + ++ I + + S + + +
Sbjct: 147 FWFGLFRYIAEGATIILVGLYWLNGIARRNNLSTFDVFPRHIVVSLIMMMAYLMSLVLYL 206
Query: 111 GLIAN-----ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS- 164
+++ IL++ S P L AI L++LS M I+ IA I+
Sbjct: 207 MTLSSDVLDAILSLEPSSITQFPYILSAIALIVLS-GLFVLRNMEKSWYWIVSIAMIIAM 265
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
+P S + + + + + ++
Sbjct: 266 SMSGHAWSQSVPLWSIILRTLHLIGISLWLGALSYL 301
>gi|195472381|ref|XP_002088479.1| GE18590 [Drosophila yakuba]
gi|194174580|gb|EDW88191.1| GE18590 [Drosophila yakuba]
Length = 822
Score = 37.5 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 58/176 (32%), Gaps = 12/176 (6%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS----- 97
++ + A+ + Y T + ++ + + + G+ +
Sbjct: 95 FQAVFALAFAYWADVYHPIKWLVGTLMLQAVTCVVAVIPSIMNFADGSKAKDALLDANMC 154
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F + + ++ L + +L + + G+ + L + I +++ +I
Sbjct: 155 ATSLAQFQRLTLTEAQSSSLTLALLFVLQLALGMGGLAYYTLGVSYIDDNSLSYDSPAVI 214
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
A G+ SF+ + V + + + I +G ++ LF
Sbjct: 215 GAA------LGARVFGQQ-AGSFLVLGVGLTHVGWWLGWVILAPLIFVGAVLLGLF 263
>gi|116492910|ref|YP_804645.1| metallo-beta-lactamase superfamily hydrolase [Pediococcus
pentosaceus ATCC 25745]
gi|116103060|gb|ABJ68203.1| Predicted hydrolase (metallo-beta-lactamase superfamily)
[Pediococcus pentosaceus ATCC 25745]
Length = 701
Score = 37.5 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 55/168 (32%), Gaps = 12/168 (7%)
Query: 56 PKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
P ++ ++ + ++Q +F H + + N
Sbjct: 273 PFVLLQMGGQLSYLLSFVLIMQQMENGWTTGIKLFLVELPIILFSTYKIHLLTMVF---N 329
Query: 116 ILAIPILSFVVIPAGLIAILL-MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++ +PI S V++P ++A L +++L N + L + +G+
Sbjct: 330 LIIVPIFSSVIVPIVIVAFALPQLMALLNPIIMMFEVTL-------KYLDKLPGLIQVGK 382
Query: 175 IP-ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ +++ ++ ++ + + + L+++
Sbjct: 383 PSRLITLFMVILALKIISTKQSKFKKRALTFYSLIWLGLWSWFKLNPY 430
>gi|328951741|ref|YP_004369076.1| DNA internalization-related competence protein ComEC/Rec2
[Marinithermus hydrothermalis DSM 14884]
gi|328452065|gb|AEB12966.1| DNA internalization-related competence protein ComEC/Rec2
[Marinithermus hydrothermalis DSM 14884]
Length = 687
Score = 37.5 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 28/232 (12%), Positives = 69/232 (29%), Gaps = 20/232 (8%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
+F +F Y + +G ++P++ +
Sbjct: 279 AIFSLSFRLSYLAV--LGLALTLPRLPPLRGVWGWVGG--------------GVAVTLAA 322
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
A ++ +FH +P+ + N++A P+++ +V L IL + L +
Sbjct: 323 QALILPLVLHYFHQLPLLSPLTNLVAAPLVTLLVPLGFLKGILGAEVPLLGEVLALPVNL 382
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIG-SIMIGITII 210
L + R++ + G I F + L +R +++ ++
Sbjct: 383 LAGGLLQFVRLAAQAPQLAWGEISPAGFALYYLALLPPFAVLYGYLRPARAAVLSATAVL 442
Query: 211 ILFTFPYSFSPDL--LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALI 260
++ L +G+ + + + AL
Sbjct: 443 AGLLPTLLPRAEVWQLDVGQGDSTLVRLPGGVEVLVDAGREWAGDDVVRALA 494
>gi|94268176|ref|ZP_01291111.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1]
gi|93451703|gb|EAT02478.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1]
Length = 309
Score = 37.5 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 14/167 (8%), Positives = 40/167 (23%), Gaps = 9/167 (5%)
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ N +R F+ + L+A + +
Sbjct: 137 RLPRERGAAQDLWRDLDAQMGNYVRGKFWEILIVGGITFISFTILRVDYAVLLATLTGLS 196
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS- 179
+L +P ++ + + L + L ++ I + +
Sbjct: 197 VL----VPYVGAVVVTIPVLLVGYFQWGVGSELAWLLIAYGIIQTLDGNVLNPLLFAKAV 252
Query: 180 ----FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
I + + + ++ T+P + P+
Sbjct: 253 NLHPVAIIGAILIFGGLWGFWGIFFAIPLATLVNALIITWPRNPDPE 299
>gi|12083665|ref|NP_073193.1| serine/threonine-protein kinase TAO2 [Rattus norvegicus]
gi|78099180|sp|Q9JLS3|TAOK2_RAT RecName: Full=Serine/threonine-protein kinase TAO2; AltName:
Full=Thousand and one amino acid protein 2
gi|7673942|gb|AAD39480.2| serine/threonine protein kinase TAO2 [Rattus norvegicus]
Length = 1235
Score = 37.5 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 27/228 (11%), Positives = 67/228 (29%), Gaps = 18/228 (7%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P ++ G V
Sbjct: 1013 HLPPSLFLLLAQGTALGAVLSLSWRRGLMGVPLGLGAAWLLAWPSLALPLAAMAAGGKWV 1072
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P F Q +A+ A + + +++ +
Sbjct: 1073 RQQGPQMRRGISRLWLRVLLRLSPMVFRALQGCAAVGDRGLFALYPKTNKNGFRSRLPVP 1132
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQL--SDILITTIRDINTK 341
+ + V + R SC + ++ + + +
Sbjct: 1133 WPRQGNPRTTQHPLALLARVWALCKGWNWRLA-RASHRLASCLPPWAVHILASWGLLKGE 1191
Query: 342 LCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + P ++ G L + P + + A+ PW
Sbjct: 1192 RPSRIPRLLPRSQRRLG-LSASRQLPPGTVAGRRSQTRRALP----PW 1234
>gi|261350449|ref|ZP_05975866.1| major facilitator family protein [Methanobrevibacter smithii DSM
2374]
gi|288861232|gb|EFC93530.1| major facilitator family protein [Methanobrevibacter smithii DSM
2374]
Length = 463
Score = 37.5 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 53/131 (40%), Gaps = 12/131 (9%)
Query: 33 GLFDFNFS----SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
F + F+ + I+A+G + I + Y + ++ + + I + I
Sbjct: 209 SAFMYGFTELHTLTGQAITAVGVIFLIIFIYYELKQKYPIFNVRLYKNHKFLSSNIASVI 268
Query: 89 GTYGSASASIFLIKHFHCIPVY-----GLIANILAIPILSFVVIP-AGLIAILLMILSLD 142
S S + HF I + GLI ++++P++ +V P +G ++ L+ L
Sbjct: 269 SYISIFSVSTIINYHFQYILGWNAQMTGLI--LISMPVMQAIVTPQSGKLSDLINPQKLS 326
Query: 143 NIPFGVMAWGL 153
+ G+ +
Sbjct: 327 ALGMGLATIAI 337
>gi|77465005|ref|YP_354508.1| glutamate-5-semialdehyde dehydrogenase [Rhodobacter sphaeroides
2.4.1]
gi|91207486|sp|Q3IXX7|PROA_RHOS4 RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR;
AltName: Full=Glutamate-5-semialdehyde dehydrogenase;
AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase;
Short=GSA dehydrogenase
gi|77389423|gb|ABA80607.1| glutamate-5-semialdehyde dehydrogenase [Rhodobacter sphaeroides
2.4.1]
Length = 420
Score = 37.5 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 22/175 (12%), Positives = 46/175 (26%), Gaps = 14/175 (8%)
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWK 256
IR + + + + +I + L + GN V L + + +
Sbjct: 113 IRRVRTPLGVVGVIYESRPNVTADAGALCLKSGNAVILRGGSESFHSSGAIHA-ALQDGL 171
Query: 257 SALITP-------FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSD 309
P E L+ + + + V H
Sbjct: 172 RQAGLPVDAIQRVPTRDRAAVAEMLRMVEHIDVIVPRGGKGLVGLVQAEARVPVFAHLEG 231
Query: 310 VIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCN--VSLLITPEILQKQGSLEI 362
+ + + + + ++ + T +C LLI L K G + I
Sbjct: 232 ICHVYADGEADL----EKARRVVLNAKTRRTGICGSAECLLIDRAFLAKHGPVLI 282
>gi|289167799|ref|YP_003446068.1| competence protein CelB [Streptococcus mitis B6]
gi|288907366|emb|CBJ22203.1| competence protein CelB [Streptococcus mitis B6]
Length = 746
Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 70/208 (33%), Gaps = 11/208 (5%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSI--KQSFLNEIRANIGTYGSASA 96
F+ F +P ++ + + I ++ K+ + A S
Sbjct: 310 FALTVL-----VLFIIMPNFFLTTGGVLSCAYAFILTMTSKEGEGFKAIARESLVISLGI 364
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
L +F + ++ + + V++P I L L + W L+ I
Sbjct: 365 LPILSFYFAEFQPWSILLTFVFSFLFDMVLLPLLSILFALSFLYPVIQLNFIFEW-LEGI 423
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT-F 215
I + +++ G+ + +++ L+ + NI+ + + + IT + T +
Sbjct: 424 IRLVSQVASR--SLVFGQPNAWLLILLLISLALVYDLRKNIKRLAVLSLLITGLFFLTKY 481
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISN 243
P +L +G + L D
Sbjct: 482 PLENEITMLDVGQGESIFLRDVTGKTIL 509
>gi|300788526|ref|YP_003768817.1| competence protein ComEC [Amycolatopsis mediterranei U32]
gi|299798040|gb|ADJ48415.1| competence protein ComEC [Amycolatopsis mediterranei U32]
Length = 788
Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 17/176 (9%), Positives = 45/176 (25%), Gaps = 21/176 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + ++ P+ DF F+ +
Sbjct: 322 RRGSALPALAFAVCLLVVADPA-----MATDFGFALSVCATGGLVLLAPRWADALVRRGI 376
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + I + L + + ++ N+LA P+++
Sbjct: 377 PPGFAEGL-------------AIPLAAFLVTAPVLAGMAGSVSLVSVLTNVLAAPVVAPA 423
Query: 126 VIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+ G++A + + + +I +A + A
Sbjct: 424 TV-LGVLATVTGPWWPGAGKVLVHLADPEARWLITVARHGARAPGAVIAWPGGWVG 478
>gi|296327641|ref|ZP_06870184.1| COME operon protein 3 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296155231|gb|EFG96005.1| COME operon protein 3 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 392
Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 17/134 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+F +F Y + AI Y + +KI+ K L+ I I
Sbjct: 244 IFSISFQLSYGAMIAIAYIFPY--------------VRKINYKKFKILDYILFIITI--Q 287
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +F+ + +I+N+L + + SF + IA+ L L + ++
Sbjct: 288 IFLIPITVYYFNSVQFLSVISNLLLLSLASFYIT-VNYIALFLENFYLSFLLKPIIEILY 346
Query: 154 DIIIHIAHRISVAH 167
I+I++ +
Sbjct: 347 KILIYLIDFFAELP 360
>gi|258645999|ref|ZP_05733468.1| conserved hypothetical protein [Dialister invisus DSM 15470]
gi|260403370|gb|EEW96917.1| conserved hypothetical protein [Dialister invisus DSM 15470]
Length = 405
Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 7/89 (7%)
Query: 4 ITKKYDPFPAETTIEGIARLSPP---SGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+ +K I L+ P +G GLF F++ GI+ + S+
Sbjct: 1 MDRKKKADGLLAGTVLICLLAAPFKETGLLGGGLFHMAFAASVGGIADLFAVSSLFGKPL 60
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIG 89
++ + ++ R +G
Sbjct: 61 GISCRTDIIARR----RDQIVDMARDMVG 85
>gi|227548752|ref|ZP_03978801.1| ComEC operon protein [Corynebacterium lipophiloflavum DSM 44291]
gi|227079164|gb|EEI17127.1| ComEC operon protein [Corynebacterium lipophiloflavum DSM 44291]
Length = 544
Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 20/188 (10%), Positives = 53/188 (28%), Gaps = 17/188 (9%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F F+ ++I ++ + + + +
Sbjct: 304 FGFALSVAATASIVALSP-------------LLYRYLVFTRWPEIVVRALAVAVAADIVT 350
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWGLDI 155
+ + + ++ANIL +P+ + V + + +L L L+ V+
Sbjct: 351 MPLVALMSGEVSIVAVLANILVVPVTAPVTVLGLVAVVLSLAPGGLEVPILWVIEPLAAW 410
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ +A + + P V ++L F R + + +
Sbjct: 411 VDLVATTGAAFPGA-TVEAGPLGVIVCY--GWVLAGFLAQRPRLTLTAVAAALAVAGPGA 467
Query: 216 PYSFSPDL 223
+ +L
Sbjct: 468 QWHKPVEL 475
>gi|121727032|ref|ZP_01680223.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|153801517|ref|ZP_01956103.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|121630543|gb|EAX62933.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124122922|gb|EAY41665.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 803
Score = 37.5 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 17/113 (15%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGI----SAIGYFYSIPKMIYSSESHNTWTW 70
I + L LFDF+F S + I +G Y P +I +
Sbjct: 372 AAIVFLVLLR---------LFDFSFISSFVSIIPVLGTLGAHYWWPAVIVPTTFLVAIGV 422
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + + + + + F+ + + ++++ I+
Sbjct: 423 ENLKNGEARVWPALIFLLIGV----FGFLYVYRFYGLTELNVSFKVISLSIIG 471
>gi|89898483|ref|YP_515593.1| hypothetical protein CF0675 [Chlamydophila felis Fe/C-56]
gi|89331855|dbj|BAE81448.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
Length = 487
Score = 37.5 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 17/146 (11%), Positives = 44/146 (30%), Gaps = 18/146 (12%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ + + P PA FS + I F+ + +
Sbjct: 305 LGLSCILCSLVFSPLSPA--------FSLSFLATLGILLFFPPIFRFFYAPWTQIVPSCF 356
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+ ++ + ++ + F +P+ GLI N+ +++P +
Sbjct: 357 LPFLRYLWG---TLSLTLASQMFLFFPAVHFFGSLPLEGLIFNLF----FPLLILPIFFL 409
Query: 133 AILLMILSLDNIPFGVMAWGLDIIIH 158
+L ++L + + +I
Sbjct: 410 ILLSLVLPFVAPVTKL---SISWLIS 432
>gi|323127659|gb|ADX24956.1| putative competence protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 747
Score = 37.5 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 59/183 (32%), Gaps = 11/183 (6%)
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGV 148
S FL+ +F ++ L + +++P + L L +L +
Sbjct: 360 ITVSLGMLPFLLFYFASFNPMSMVLTELLSYLFDVLILPLLCLVFCLSPLITLSGCNYLF 419
Query: 149 MAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIG 206
+ + + + G + +V+ F ++ + R I ++
Sbjct: 420 L-----FLEKVIQFFGNTLNASLVFGSPTSWHLLILVISFAILYDHRKIRQRVITCGLVI 474
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVD--KNTLISNYSNPPSFIF-SQWKSALITPF 263
++ +P + + +G+ + + D L+ + SF QW+ T
Sbjct: 475 GLTLLSVKYPLTNEVTFIDIGQGDSILVRDWTGKNLLIDVGGRLSFSSKEQWRQGHQTSN 534
Query: 264 HEA 266
+
Sbjct: 535 AQK 537
>gi|255325516|ref|ZP_05366618.1| competence protein [Corynebacterium tuberculostearicum SK141]
gi|255297454|gb|EET76769.1| competence protein [Corynebacterium tuberculostearicum SK141]
Length = 470
Score = 37.5 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 49/183 (26%), Gaps = 20/183 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F F+ I + + + +
Sbjct: 304 FGFALSCAATLGIVALSPLIYKHLAVTGWPAIFLR-------------AVAVAIAADIVT 350
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP---FGVMAWGL 153
+ + V ++ANIL P + I + AI + LD + ++
Sbjct: 351 LPLVALMSGEVSVVSVLANILVEPATVPITIVGLIAAIFAQLGPLDVLGAGLLRLIEPFS 410
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
I IAH ++ + IP + T++ ++ + + + I L
Sbjct: 411 WWINTIAHGVAHLP----VVTIPASPLFTLLAYAWIIAGLLYHRPWLTLALTLAGIAWLG 466
Query: 214 TFP 216
Sbjct: 467 LAA 469
>gi|72161014|ref|YP_288671.1| diguanylate cyclase/phosphodiesterase [Thermobifida fusca YX]
gi|71914746|gb|AAZ54648.1| diguanylate cyclase/phosphodiesterase [Thermobifida fusca YX]
Length = 901
Score = 37.5 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 21/180 (11%), Positives = 46/180 (25%), Gaps = 16/180 (8%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ A + G+ +G G F F + ++ + +
Sbjct: 86 WCAGSITYGV------TGLLNAGAFSLTFGDLFSLVALPLFTVGFLRFAPLPRRPRA--- 136
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + + + + +F + G +A L P+ V+
Sbjct: 137 -----LVRHVTDSYVCAAAVFSTVWLVLFQPLYQELGGNAGAMAFALVYPVTDIAVVCLL 191
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+L S M + I A I + ++ FLL+
Sbjct: 192 APLVLTSPHSTRRAVLLAMGAFVT--ICAADLIGAVGRLSGEAVAGGIEYPVRLLGFLLL 249
>gi|317152907|ref|YP_004120955.1| DNA internalization-like competence protein ComEC/Rec2
[Desulfovibrio aespoeensis Aspo-2]
gi|316943158|gb|ADU62209.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio aespoeensis Aspo-2]
Length = 801
Score = 37.5 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 9/106 (8%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
++D ++ IG + + I S + + +
Sbjct: 354 SVYDLGLQMSALAVAGIGL---MHRRIRPLVSGGAGAVRAVLGFAWGV-----LAVSLCA 405
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
S S + +F + L+ N++ IP L F V+P G++ +LL +
Sbjct: 406 SISLLPLVSWYFGTLAPNILL-NVIWIPALGFAVMPLGIMGMLLAL 450
>gi|300723779|ref|YP_003713086.1| DnaG primase-like [Xenorhabdus nematophila ATCC 19061]
gi|297630303|emb|CBJ90957.1| DnaG primase-like [Xenorhabdus nematophila ATCC 19061]
Length = 920
Score = 37.1 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 12/124 (9%), Positives = 33/124 (26%), Gaps = 4/124 (3%)
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+A ++ + +P + T LL+ G + + L
Sbjct: 389 LAAEVAALPSA--PPPVPGVVWETNAAGELLISLGSLRWYLRGLSGVKAGAVALKLNAQV 446
Query: 219 FSPD--LLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
++ + +L++ + + + + AL Q++
Sbjct: 447 TDTQSGVMFVDSLDLLSARSRQGYARLAAAELGLADGELRRALGQVLLAIEQWQQQGEST 506
Query: 277 KNQS 280
S
Sbjct: 507 TAAS 510
>gi|300864582|ref|ZP_07109441.1| Sensor protein [Oscillatoria sp. PCC 6506]
gi|300337406|emb|CBN54589.1| Sensor protein [Oscillatoria sp. PCC 6506]
Length = 1015
Score = 37.1 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 54/165 (32%), Gaps = 16/165 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKG---ISAIGYFYSIPKMIYSS 62
+K+ F T G L + F++ + + I + +P Y+S
Sbjct: 37 RKWSEFLVANTAIGGISFLALEAIGGSLLISYGFANSFWAIITVGTIIFLAGLPIAYYAS 96
Query: 63 ----ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
+ I + + I A+ A + + + +Y ++ +
Sbjct: 97 KYNIDIDLLTRGAGFGYIGSTITSLIYASFTFIFFALEAAIMA---QALELYFHLSLPIG 153
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
+ S ++IP + L ++ + + +I+ IA I
Sbjct: 154 YVLCSLIIIPLVFYGVTL----INQLQLWT--QPIWLILMIAPYI 192
>gi|296393432|ref|YP_003658316.1| ComEC/Rec2-related protein [Segniliparus rotundus DSM 44985]
gi|296180579|gb|ADG97485.1| ComEC/Rec2-related protein [Segniliparus rotundus DSM 44985]
Length = 530
Score = 37.1 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 47/170 (27%), Gaps = 15/170 (8%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D+ F A+ + + ++ +++ + + G
Sbjct: 330 DYGFVLSVLATGALVRLAPRWQKMLAARGAPPALAGMLAAAAAAHMATAPVVAMLTG--- 386
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLD 154
+ + GLIAN+L P++ V + A ++ + +
Sbjct: 387 ----------EVSLVGLIANVLVEPVIGLVTVLGCSGAAAAVLWEPAGELIVRFAGVPMT 436
Query: 155 IIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
++ +A + G +T +L R G +
Sbjct: 437 WLVMVARSGAACPFGVVRTGSGGAGFLMTAAALLVLAGVLWLLTRGAGPL 486
>gi|115449875|ref|XP_001218719.1| hypothetical protein ATEG_10371 [Aspergillus terreus NIH2624]
gi|114187668|gb|EAU29368.1| hypothetical protein ATEG_10371 [Aspergillus terreus NIH2624]
Length = 2411
Score = 37.1 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 22/217 (10%), Positives = 57/217 (26%), Gaps = 30/217 (13%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ + +PK + S + ++ + + + + FL F
Sbjct: 2169 VIGVILALGLPKYYRQAPSRILFFYRSLFRRRIVLWFCFMVIVQNW-------FLAAAFG 2221
Query: 106 CIPVYGLIANI-------LAIPILSFVVIPAGLIAILLMILSLDN-IPFGVMAWGLDIII 157
+ + + + I ++ F ++ LI LS ++ V L
Sbjct: 2222 R--NWSFLWSSKHAKTWEVVILVVGFFIVLWVLILFAFRALSKEHSWILPVFGLSLGS-- 2277
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI--MIGITIIILFTF 215
IG + + +G + + + + ++
Sbjct: 2278 --PRWAQTWWGTSNIGYFLPWAGSLTSGAIVSRCLW----LWLGVLDEIQQVGVGMILLQ 2331
Query: 216 PYSFS---PDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ LL ++ +A + N P
Sbjct: 2332 TLTRVHVCFVLLAAQAMGSIATICARGFAPNRLGPDG 2368
>gi|226377838|ref|YP_002790883.1| polyprotein [Bagaza virus]
gi|54399548|gb|AAV34161.1| polyprotein [Bagaza virus]
Length = 3426
Score = 37.1 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 76/291 (26%), Gaps = 22/291 (7%)
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
Y ++A + + T+ + + S + T + ++ +
Sbjct: 1199 YVLLVAAAFAESNSGGDVIHLALIATFNVQPGLLVAYSLRRKWSNQDATLLGVALAMITM 1258
Query: 102 K-HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD----II 156
H + + L+ + +L V + A + IL L ++ + +I
Sbjct: 1259 ALHDWNMTIPSLLNSGATAWLLLRAVSEGTVSAACIPILGLLAPGMKIIGIDVFRIGLLI 1318
Query: 157 IHIA-------HRISVAHNEFCIGRI--PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
I + + I+ IG + +V L + +N R +
Sbjct: 1319 IGVMSLLKERNNAIAKKKGGVLIGLALAQDGWVNPLVYAGLTLALKPSNRRGW---PVSE 1375
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
+ + E + L ++ + F W
Sbjct: 1376 ALTAVGLTFALAGGIAHFDEGDMAIPLAVGGIMLVV-AVVTGFTTDLWLERAGDISWIED 1434
Query: 268 HVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRK 318
Q + + + + + F + R+ +I+
Sbjct: 1435 AQITGSSQRYDVEIDCDGNMKLMNDQGV----PFSIWALRTGLILASAYNP 1481
>gi|32267158|ref|NP_861190.1| hypothetical protein HH1659 [Helicobacter hepaticus ATCC 51449]
gi|32263211|gb|AAP78256.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 445
Score = 37.1 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 44/148 (29%), Gaps = 23/148 (15%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYK-----------GISAIGYFYSIP 56
+ P + I + + G+ +F + I +IG+ S+
Sbjct: 242 FSPSFLRSFIMAVCGFF----VVYSGIRLISFKLLFVVVCVCLALFPRLIFSIGFALSVS 297
Query: 57 KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI 116
+ + + + + + T F+ F Y N+
Sbjct: 298 GVFFIYLFVRHI--HWVGGLWHKI-VSVPISFNTLIFLDMLPFVHWFF----PYFTPLNV 350
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNI 144
L+IP+ V+ L+ ++ I +
Sbjct: 351 LSIPLSLIFVVFFPLM-LVAHIFGFGWV 377
>gi|327183360|gb|AEA31807.1| Competence protein ComEC [Lactobacillus amylovorus GRL 1118]
Length = 761
Score = 37.1 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 57/146 (39%), Gaps = 8/146 (5%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
I + +P++ ++ + ++ + SF + + + L+ F+ I
Sbjct: 323 IIHLLFVPRLFMAAGALLSYILALGLQLTDSFNGLKQ---SILLNLLLTPLLLLFFYQIN 379
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVA 166
++ N+L +P ++VV+P I +L + L ++ G +I ++
Sbjct: 380 FLTVLFNMLVVPYFNWVVMPLAFINVLTFGFTKRLAPFFEKILELGEQLIERLSQ---TK 436
Query: 167 HNEFCIGRIPETSFVTIVVEFLLMVF 192
G+I + +++ + ++
Sbjct: 437 LGLLDFGQINWWQCLLLLIVSIALII 462
>gi|152969365|ref|YP_001334474.1| putative cell division protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150954214|gb|ABR76244.1| putative transmembrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 546
Score = 37.1 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 40/343 (11%), Positives = 93/343 (27%), Gaps = 42/343 (12%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG--------- 89
F+ Y GI FY + S + W I + I +
Sbjct: 20 FACYI-GICLNLAFYRQVFPLLPVNSLHNWLVFLSMPIVAISVMNILTTLASFLKLDRLV 78
Query: 90 ---TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++++ + I +F + +I NIL + L ++ +L L +
Sbjct: 79 ISLFILLSASAQYFIWNFGVVIDRSMITNILDTTPAESFAL---LSGEMIAVLGLSGVLA 135
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL----MVFCKTNIRHIGS 202
+AW + I + I ++ + I+V L + N + S
Sbjct: 136 VFIAWWVKIRKPATRWRGA---AMRLLNIAVSALLIILVAALFYKDYASVFRNNKELVKS 192
Query: 203 IMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKNTL-------ISNYSNPPSFI 251
+ +I+ + ++ D + I E A++ + S +F
Sbjct: 193 LSPSNSIVAVNSWYAHHRMDNLPLVKIGEDATQKAVMHNAPRKNLTIVVLGETSRADNFS 252
Query: 252 F-------SQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVG 304
+ + + R+ + ++
Sbjct: 253 LGGYSRDTNPLMRQDGVIYFPHTTSCGTATAVSVPCMFSNMPRAHYDEELAHHQEGVLDI 312
Query: 305 CHRSDVIVGVLKRKDMIRLSCQLS-DILITTIRDINTKLCNVS 346
R+ + V + +C +T ++ +
Sbjct: 313 LQRAGIQVLWNDNDGGCKGACDRVPHQNVTDLKLTGQCIDGEC 355
>gi|297283773|ref|XP_001106511.2| PREDICTED: serine/threonine-protein kinase TAO2 isoform 4 [Macaca
mulatta]
Length = 1122
Score = 37.1 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 24/228 (10%), Positives = 63/228 (27%), Gaps = 16/228 (7%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G
Sbjct: 898 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWA 957
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P +F Q A+ A + + +++ +
Sbjct: 958 RQQGPRVRRGISRLWLRVLLRLSPMAFRALQGCGAVGDRGLFALYPKTNKDGFRSRLPIP 1017
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL-ITTIRDINTKL 342
R + V + + + I + + + +
Sbjct: 1018 GPRRRNPRTTQHPLALLAKVWALCKGWNWRLARASRGLASHLPPWAIHTLASWGLLRGER 1077
Query: 343 CNVSLLITPEILQKQGSLEITII-PPSNDNDKVKFIIKSAIENLHFPW 389
+ P ++ G P + + + A+ PW
Sbjct: 1078 PTRIPRLLPRSQRQLGPPASHQPLPGTLAGRRSRTRQSRALP----PW 1121
>gi|298737023|ref|YP_003729553.1| competence protein ComEC [Helicobacter pylori B8]
gi|298356217|emb|CBI67089.1| competence protein ComEC [Helicobacter pylori B8]
Length = 437
Score = 37.1 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 43/164 (26%), Gaps = 37/164 (22%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF F G+ I F + + + S +++ I ++
Sbjct: 278 LFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQAI-------------SLSALVF 324
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ I F Y L + IP GLI I+ LSL + G
Sbjct: 325 LNMLIVAHAFFPMFSPYQLFS------------IPLGLIFIVFFPLSL---FLHAVGLG- 368
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF-LLMVFCKTN 196
+ + IP ++ L +
Sbjct: 369 ----SLLDNVLSMPLTIPTISIPS---PLWLLGAHLFLTILSAR 405
>gi|306822685|ref|ZP_07456063.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|304554230|gb|EFM42139.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
Length = 573
Score = 37.1 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 29/223 (13%), Positives = 63/223 (28%), Gaps = 24/223 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ L P + F F+ + I F
Sbjct: 350 LFVGRRGQALNTLCWTAMGVLLIQPY-----MSYSFGFALSCAAVLGIVLF--------- 395
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ W + A + + +PV+ ++AN++ P+
Sbjct: 396 ADRMTDWLKAMLPLFVAQ-----AAGMTIAAQLFTLPLQVLIEPELPVFSILANLVVSPV 450
Query: 122 LSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI--GRIPET 178
+ F + L IL + + + G I+ ++ + ++ G IP
Sbjct: 451 VGFSTLAGLASLALSWILPDIGFVLAWLSGCGTAIMEIVSLHLGSGNHATIPWAGGIPGA 510
Query: 179 SFVTIVVEFLLMVFC--KTNIRHIGSIMIGITIIILFTFPYSF 219
V V + R G+ G+ + + P
Sbjct: 511 MLVLAVESVCACSVWLMRRIARRAGTPEQGMPGRRMLSNPMDR 553
>gi|149910265|ref|ZP_01898909.1| DNA segregation ATPase FtsK [Moritella sp. PE36]
gi|149806625|gb|EDM66592.1| DNA segregation ATPase FtsK [Moritella sp. PE36]
Length = 850
Score = 37.1 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 16/87 (18%)
Query: 160 AHRISVAHNEFCIGRIP--ETSFVTIVVEFLLMVFCKTN-----------IRHIGSIMIG 206
A + + + V F +F + +R IG++++
Sbjct: 64 AGSFGAWIGDVLLFTFGLYAYAIPLAFVSFAWFIFWRPRQLDEIDFFTVGLRMIGALLLL 123
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVA 233
I + L + + DL G L+
Sbjct: 124 IGVCGLASVNFD---DLYYFSSGGLIG 147
>gi|332306517|ref|YP_004434368.1| membrane-bound PQQ-dependent dehydrogenase,
glucose/quinate/shikimate family [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332173846|gb|AEE23100.1| membrane-bound PQQ-dependent dehydrogenase,
glucose/quinate/shikimate family [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 816
Score = 37.1 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 35/119 (29%), Gaps = 20/119 (16%)
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG---------RIPE 177
+P + A++ + L + + GL +I+ + R+
Sbjct: 12 LPLRIFAVVCFFIGL----YLAIG-GLWLILESGSYYYALAGASLLLTSVLLYFKQRLGL 66
Query: 178 TSFVTIVVEFLLMVFCKTN---IRHI---GSIMIGITIIILFTFPYSFSPDLLISEKGN 230
F + + L ++ R + G + I+ L + S S G
Sbjct: 67 WVFALMFLGTLGWTIWESGLDYWRWVPRMGVPVALGFILALLLPSFGISKRASFSLAGA 125
>gi|114047909|ref|YP_738459.1| hypothetical protein Shewmr7_2417 [Shewanella sp. MR-7]
gi|113889351|gb|ABI43402.1| protein of unknown function UPF0118 [Shewanella sp. MR-7]
Length = 366
Score = 37.1 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 15/169 (8%), Positives = 47/169 (27%), Gaps = 9/169 (5%)
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
++ K + Q N IR + + ++ F + L+ + + +L
Sbjct: 193 PTNRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYSALLGVLTGLSVL 252
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-----RIPE 177
IP ++ + ++L + ++ I + +
Sbjct: 253 ----IPYVGATLVTLPITLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPILFSDAVDL 308
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ I + + + ++ +P + + I+
Sbjct: 309 HPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPKTEIEPVAIT 357
>gi|115526774|ref|YP_783685.1| periplasmic sensor hybrid histidine kinase [Rhodopseudomonas
palustris BisA53]
gi|115520721|gb|ABJ08705.1| periplasmic sensor hybrid histidine kinase [Rhodopseudomonas
palustris BisA53]
Length = 1166
Score = 37.1 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 47/159 (29%), Gaps = 10/159 (6%)
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI---IIHIAHRISVAHNEFCI 172
L + ++ VIP L ++ V+A ++ + + I +
Sbjct: 284 PLYLVAINLFVIPIALAGLVTFPFGAVEPDMFVLALPIEARQSWLSVIVFIGGLSAATAM 343
Query: 173 GRIPETSFVTIVVEFLL--MVFCKTNI-----RHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + +V L+ +V + + RH G ++ + + +F
Sbjct: 344 VIVESVALAVMVSNDLVMPLVLKRGSAPQSNERHFGGFLLIVRRVAIFVILLMAYLYFRE 403
Query: 226 SEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
L A+ + P F W+ A
Sbjct: 404 LGNTQLAAIGLLSFAAIAQFAPSFFGGLVWRRATALGAI 442
>gi|269127083|ref|YP_003300453.1| prolipoprotein diacylglyceryl transferase [Thermomonospora curvata
DSM 43183]
gi|268312041|gb|ACY98415.1| prolipoprotein diacylglyceryl transferase [Thermomonospora curvata
DSM 43183]
Length = 498
Score = 37.1 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 38/144 (26%), Gaps = 5/144 (3%)
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+A S A + +G IP ++ +++ +++ R +I + +
Sbjct: 4 LATIPSPAEGVWHLGPIPIRAYALMIIAGIVVAVWLGERRWAAKGGTPGVVIDVAVWA-- 61
Query: 219 FSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKN 278
LL G L ++ P W+ L A + +
Sbjct: 62 VPFGLL---GGRLYHVITDWQRYFGDGGDPGRAVRVWEGGLGIWGAIALGALGAWIGCRR 118
Query: 279 QSSLKEILRSMQPRKFLCIKKSFC 302
+ L +
Sbjct: 119 RGVSVLALGDAIAPGLALAQAIGR 142
>gi|94266678|ref|ZP_01290353.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1]
gi|93452666|gb|EAT03223.1| Protein of unknown function UPF0118 [delta proteobacterium MLMS-1]
Length = 362
Score = 37.1 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 14/167 (8%), Positives = 40/167 (23%), Gaps = 9/167 (5%)
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+ N +R F+ + L+A + +
Sbjct: 190 RLPRERGAAQDLWRDLDAQMGNYVRGKFWEILIVGGITFISFTILRVDYAVLLATLTGLS 249
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS- 179
+L +P ++ + + L + L ++ I + +
Sbjct: 250 VL----VPYVGAVVVTIPVLLVGYFQWGVGSELAWLLIAYGIIQTLDGNVLNPLLFAKAV 305
Query: 180 ----FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
I + + + ++ T+P + P+
Sbjct: 306 NLHPVAIIGAILIFGGLWGFWGIFFAIPLATLVNALIITWPRNPDPE 352
>gi|255003684|ref|NP_001157247.1| serine/threonine-protein kinase TAO2 isoform 2 [Mus musculus]
gi|322510103|sp|Q6ZQ29|TAOK2_MOUSE RecName: Full=Serine/threonine-protein kinase TAO2; AltName:
Full=Thousand and one amino acid protein 2
Length = 1240
Score = 37.1 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 26/228 (11%), Positives = 65/228 (28%), Gaps = 18/228 (7%)
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRH-IGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P F+ + L+ + R + + +G+ L +P P ++ G V
Sbjct: 1018 HLPPGLFLLLAQGTALLAVLSLSWRRGLMGVPLGLGAAWLLAWPSLALPLAAMAAGGKWV 1077
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ I +P F Q A+ A + + +++ +
Sbjct: 1078 RQQGPQMRRGISRLWLRILLRLSPMVFRALQGCGAVGDRGLFALYPKTNKNGFRSRLPVP 1137
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQL--SDILITTIRDINTK 341
+ + + V + R SC + ++ + + +
Sbjct: 1138 WPRQGNPRTTQHPLAQLTRVWAVCKGWNWRLA-RASHRLASCLPPWAVHILASWGLLKGE 1196
Query: 342 LCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + P ++ G L + P + + + PW
Sbjct: 1197 RPSRIPRLLPRSQRRLG-LSASRQLPPGTVAGRRSQTRRTLP----PW 1239
>gi|309800864|ref|ZP_07694996.1| ComEC/Rec2-like protein [Bifidobacterium dentium JCVIHMP022]
gi|308222400|gb|EFO78680.1| ComEC/Rec2-like protein [Bifidobacterium dentium JCVIHMP022]
Length = 535
Score = 37.1 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 24/223 (10%), Positives = 62/223 (27%), Gaps = 24/223 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + ++ L P + F F+ + I F
Sbjct: 312 LFVGRRGQALNTLCWTAMGVLLIQPY-----MSYSFGFALSCAAVLGIVLF--------- 357
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ W + A + + +PV+ ++AN++ P+
Sbjct: 358 ADRMTDWLKAMLPLFVAQ-----AAGMTIAAQLFTLPLQVLIEPELPVFSILANLVVSPV 412
Query: 122 LSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ F + L IL + + + G I+ ++ + ++
Sbjct: 413 VGFSTLAGLASLALSWILPDIGFVLAWLSGCGTAIMEIVSLHLGSGNHATIPWAGGIPGA 472
Query: 181 VTIVVE----FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ ++ + + R G+ G+ + + P
Sbjct: 473 MLVLAVESVCACSVWLMRRIARRAGTPEQGMPGRRMLSNPMDR 515
>gi|260771904|ref|ZP_05880822.1| probable low-affinity inorganic phosphate transporter [Vibrio
metschnikovii CIP 69.14]
gi|260613196|gb|EEX38397.1| probable low-affinity inorganic phosphate transporter [Vibrio
metschnikovii CIP 69.14]
Length = 419
Score = 37.1 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 34/228 (14%), Positives = 80/228 (35%), Gaps = 9/228 (3%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISA------IGYFYSIPKMI 59
K++ P T IA ++ G GL + ++ I IGY Y K
Sbjct: 182 KRFVPVYMFITTMVIALVTIKKGLKHVGLHLTSSEAWICSILVSGIVMVIGYLYIYKKFA 241
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ E+H ++I S+ A + +I + + + N+ +
Sbjct: 242 DTEENHGFSNVERIFSVLMVITACAMAFAHGSNDVANAIGPLA--AVVSTVESLGNVASK 299
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+++ ++P G I I++ + +L + + G+ + + + T
Sbjct: 300 SAIAWWILPLGGIGIVIGLATLGHKVMATVGTGITELTPSRGFAAQLATASTVVLASGTG 359
Query: 180 FVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ + V R I ++ +G+ I+ ++ + L++
Sbjct: 360 LPISTTQTLVGAVLGVGFARGIAALNLGVVRNIVASWIVTLPAGALLA 407
>gi|94992711|ref|YP_600810.1| COME operon protein 3 [Streptococcus pyogenes MGAS2096]
gi|94546219|gb|ABF36266.1| COME operon protein 3 [Streptococcus pyogenes MGAS2096]
Length = 650
Score = 37.1 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 23/237 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F G+ Y + + T +++S K+ + + ++G
Sbjct: 320 LWDAHFLMTVGGVLTFSYAFLL----------TVVTVEELSGAKRQLVQVLTISLGI--- 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
FL+ +F ++ L + ++P + L L +I +
Sbjct: 367 ---LPFLLFYFSSFNPMSMVLTGLLSYLFDLFILPLLCLVFCLSPLVTVSICNHLFILLE 423
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITII 210
+I + + + G + +V+ F + + + G ++ +
Sbjct: 424 KVIQFLGNTFNS---SLVFGSPTSWHLLILVISFAIFYDYRQVRQRVITCGLVIALTLLS 480
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ-WKSALITPFHEA 266
+ + + + LV L+ + P F + W+ +
Sbjct: 481 VKYPLTNEVTFIDIGQGDSILVREWTGKNLLIDVGGRPFFSSKEHWRRGHHVANAQK 537
>gi|113970680|ref|YP_734473.1| hypothetical protein Shewmr4_2345 [Shewanella sp. MR-4]
gi|113885364|gb|ABI39416.1| protein of unknown function UPF0118 [Shewanella sp. MR-4]
Length = 366
Score = 37.1 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 15/169 (8%), Positives = 47/169 (27%), Gaps = 9/169 (5%)
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
++ K + Q N IR + + ++ F + L+ + + +L
Sbjct: 193 PTNRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYSALLGVLTGLSVL 252
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-----RIPE 177
IP ++ + ++L + ++ I + +
Sbjct: 253 ----IPYVGATLVTLPITLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPILFSDAVDL 308
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ I + + + ++ +P + + I+
Sbjct: 309 HPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPKTEIEPVAIT 357
>gi|307704923|ref|ZP_07641814.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus mitis SK597]
gi|307621537|gb|EFO00583.1| DNA internalization-related competence protein ComEC/Rec2
[Streptococcus mitis SK597]
Length = 746
Score = 37.1 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 72/210 (34%), Gaps = 15/210 (7%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTYGSASA 96
F+ + F +P ++ + + I ++ ++A S
Sbjct: 310 FALT-----VLILFIIMPNFFLTAGGVLSCAYAFILTMTSKEGEGLKAIARESLVISLGI 364
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP--FGVMAWGLD 154
L +F + ++ + + V +P L++IL I L + + W L+
Sbjct: 365 LPILSFYFAEFQPWSILLTFVFSFLFDMVFLP--LLSILFAISFLYPVIQLNFIFEW-LE 421
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI-MIGITIIILF 213
II + +++ G+ + +++ L+ + NI+ + + ++ + L
Sbjct: 422 DIIRLVSQVASRP--LVFGQPNSWLLMLLLISLALVYDLRKNIKRLAVLSLLITGLFCLT 479
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISN 243
P +L +G + L D
Sbjct: 480 KHPLENEITMLDVGQGESIFLRDVTGKTIL 509
>gi|299768780|ref|YP_003730806.1| preprotein translocase subunit SecD [Acinetobacter sp. DR1]
gi|298698868|gb|ADI89433.1| preprotein translocase subunit SecD [Acinetobacter sp. DR1]
Length = 633
Score = 37.1 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 48/151 (31%), Gaps = 18/151 (11%)
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ I ++GLIAN + L+ ++ I L + + I +
Sbjct: 473 LSTQIGFLLVAIWMVVFFRLFGLIANFALVVNLAMILTVMSWIGASLTLPGIAGIVITI- 531
Query: 150 AWGLDI-----------IIHIA----HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+D ++ A ++ + I +++ T +V F+L
Sbjct: 532 GMAVDANVLICERIREEMLWGASPKQAIVAGYDRAYNT--IFDSNLTTFLVAFILFAIGT 589
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
I+ ++ + +FT + I
Sbjct: 590 GPIKGFAVTLMIGIVCSMFTAITVTRAIVQI 620
>gi|152990088|ref|YP_001355810.1| DNA uptake protein [Nitratiruptor sp. SB155-2]
gi|151421949|dbj|BAF69453.1| DNA uptake protein [Nitratiruptor sp. SB155-2]
Length = 413
Score = 36.7 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 51/179 (28%), Gaps = 42/179 (23%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF F G+ I F + I I +
Sbjct: 272 LFSIGFWLSVSGVFYIYLFLHHFR---------------------YSKVAIFVLINFWMY 310
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + FH + A P+LS V + + +LL ++ L + GV+ +
Sbjct: 311 LVMMPWSLYIFHHFSLMQFFA-----PLLSMVFVLFYPVELLLHVVGLGGVLDGVLGF-- 363
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++ +H P + + L + R +++ I I L
Sbjct: 364 ---LYSSH-------AVMKIEFPLWLLILHIFASFLAI----WYRWAVVLIVAIPAIFL 408
>gi|309366788|emb|CAP20820.2| hypothetical protein CBG_24144 [Caenorhabditis briggsae AF16]
Length = 503
Score = 36.7 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 22/146 (15%)
Query: 102 KHFHCIPV-YGLIANILAIPILSFV--------VIPAGLIAILLMILSLDNIPFGVMAWG 152
F + IA I+A+PI+S + +I I L L+ P +
Sbjct: 72 WFFQEFGLTIFTIAAIVAVPIMSMLADKYGRKPIIVFSAILAFLANLAASFSPNYAVFLC 131
Query: 153 LDIIIHIAHRISVAHNEFCI---------GRIPETSFVTIVVEFLL---MVFCKTNIRHI 200
L I+ + ++ I V + + + T+ R
Sbjct: 132 LRAIVGASSDTYLSVGSVATCEYISEKARAWITVVYNVAWSLGMVWTLLVTLMTTDWRWR 191
Query: 201 GSIMIGITIIILFTF-PYSFSPDLLI 225
I++ I + SP LI
Sbjct: 192 YFIVVFPGIYAFLLWCFLPESPHWLI 217
>gi|29832035|ref|NP_826669.1| hypothetical protein SAV_5492 [Streptomyces avermitilis MA-4680]
gi|29609153|dbj|BAC73204.1| putative membrane protein [Streptomyces avermitilis MA-4680]
Length = 840
Score = 36.7 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 23/219 (10%), Positives = 59/219 (26%), Gaps = 21/219 (9%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA +T + L P + F A ++ +
Sbjct: 432 RRRSLIPALSTAVLLLVLYDPWLARS-----YGFLLSVLATGA---------LLTVAPRW 477
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA-IPILSF 124
+ ++ + + + ++ + + + N+LA +
Sbjct: 478 SAALQRRRVPPRLAEALAAAGAAQALCAPVVAVLSA----RVSLVAVPCNLLAEFAVAPA 533
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
V+ +A+ + + + +W + I IA + T + +
Sbjct: 534 TVLGFAALAVAPVAMPVAKGLVWCASWPVGWIADIARTGAALPGGGVDWPGSWTGALLLT 593
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
+ +V R + + LF P L
Sbjct: 594 LVTAAVVLVGR--RLVRHPWPAGLCVGLFLLVVVQPPPL 630
>gi|37521448|ref|NP_924825.1| competence protein ComE [Gloeobacter violaceus PCC 7421]
gi|35212445|dbj|BAC89820.1| glr1879 [Gloeobacter violaceus PCC 7421]
Length = 720
Score = 36.7 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 73/236 (30%), Gaps = 21/236 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + +K +P A + ++ P ++D F+ + ++ +G S+P++
Sbjct: 299 IVLGEKAEPLGALWAAAFVLLVADPL-----MIWDLGFAFSF--LATLGLVVSVPRLTAR 351
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
E +G + + F Y L N+LA P+
Sbjct: 352 LEGLPG-------------TIAAALAVGFAATLWTLPLQLLIFGQWSPYALALNLLAAPV 398
Query: 122 LSFVVIPA-GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ + + A+ L+ + + + W L + + +++ +
Sbjct: 399 VEVLTLGGMAASALALVHPNAAGVLDIPLGWLLAALDALVRQVADWPGSLATPGLLLPVQ 458
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
+ L+ R + + + + + + +L S + +
Sbjct: 459 AVALYALLVAAHTHLPWRPLTLAAALVLVAPGWLPRPAVTLAVLASGGSEALVIET 514
>gi|301595291|ref|ZP_07240299.1| preprotein translocase subunit SecD [Acinetobacter baumannii AB059]
Length = 633
Score = 36.7 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 18/151 (11%)
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ I ++GLIAN + L+ ++ I L + + I +
Sbjct: 473 LSTQIGFLLVAIWMVVFFRLFGLIANFALVFNLAMILTIMSWIGASLTLPGIAGIVITI- 531
Query: 150 AWGLDI-----------IIHIA----HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+D ++ A ++ + I +++ T +V F+L
Sbjct: 532 GMAVDANVLICERIREEMLWGASPKQAIVAGYDRAYNT--IFDSNLTTFLVAFILFAIGT 589
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
I+ ++ I +FT + I
Sbjct: 590 GPIKGFAVTLMIGIICSMFTAITVTRAIVQI 620
>gi|298486203|ref|ZP_07004266.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298159210|gb|EFI00268.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 448
Score = 36.7 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 32/317 (10%), Positives = 79/317 (24%), Gaps = 23/317 (7%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ +L P+G P FD+ + I A G + + + ++
Sbjct: 123 SGERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLTPARGAWRDLIRQR 182
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+ ++ A + + S + ++L I ++ +
Sbjct: 183 LLAVDAQGREGGLAALVLGDGSGLSSTDWQVLQDTGTV----HLLVISGQHIGLLAGVIY 238
Query: 133 AILLMILSLDNIPFGVMAWGLDIIIH--IAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
A++ L L + I+ G ++V +L
Sbjct: 239 ALVA---GLARWGLWP--RALPWLPWACALAFIAALGYGLLAGFEVPVRRACVMVAMVL- 292
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL----VDKNTLISNYSN 246
+ RH+G + + + L + G + + +
Sbjct: 293 -LWRLRFRHLGVVWPIQRGADFRAAGDTAAGVLAVFRGGWHSGADFQWTSRCLELVAKLD 351
Query: 247 PPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCH 306
+ W +A A Q+ Q + + + +C
Sbjct: 352 ACAVADRNWLAAYSAGAEPADQPQRAVCQFAGCALGQLDRPAACVAWNTAAAGLWC---- 407
Query: 307 RSDVIVGVLKRKDMIRL 323
+ + R+
Sbjct: 408 --GRRLALAGRRGAGVA 422
>gi|262041137|ref|ZP_06014354.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041511|gb|EEW42565.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 546
Score = 36.7 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 40/343 (11%), Positives = 92/343 (26%), Gaps = 42/343 (12%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG--------- 89
F+ Y GI FY + S + W I + I +
Sbjct: 20 FACYI-GICLNLAFYRQVFPLLPVNSLHNWLVFLSMPIVAISVMNILTTLASFLKLDRLV 78
Query: 90 ---TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++++ + I +F + +I NIL + L ++ +L L +
Sbjct: 79 ISLFILLSASAQYFIWNFGVVIDRSMITNILDTTPAESFAL---LSGEMIAVLGLSGVLA 135
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL----MVFCKTNIRHIGS 202
+AW + I + I ++ + I+V L + N + S
Sbjct: 136 VFIAWWVKIRKPTTRWRGA---AMRLLNIAVSALLIILVAALFYKDYASVFRNNKELVKS 192
Query: 203 IMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKNTL-------ISNYSNPPSFI 251
+ +I+ + + D + I E A++ + S +F
Sbjct: 193 LSPSNSIVAVNFWYAHHRMDNLPLVKIGEDATQKAVMHNAPRKNLTIVVLGETSRADNFS 252
Query: 252 F-------SQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVG 304
+ + + R+ + ++
Sbjct: 253 LGGYSRDTNPLMRQDGVIYFPHTTSCGTATAVSVPCMFSNMPRAHYDEELAHHQEGVLDI 312
Query: 305 CHRSDVIVGVLKRKDMIRLSCQLS-DILITTIRDINTKLCNVS 346
R+ + V + +C +T ++ +
Sbjct: 313 LQRAGIQVLWNDNDGGCKGACDRVPHQNVTDLKLTGQCIDGKC 355
>gi|218258670|ref|ZP_03474991.1| hypothetical protein PRABACTJOHN_00646 [Parabacteroides johnsonii DSM
18315]
gi|218225295|gb|EEC97945.1| hypothetical protein PRABACTJOHN_00646 [Parabacteroides johnsonii DSM
18315]
Length = 1612
Score = 36.7 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 28/259 (10%), Positives = 66/259 (25%), Gaps = 42/259 (16%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGI---SAIGYFYSIPKMIYSSESHNT 67
P +A L + F + I Y+ +
Sbjct: 942 IPLAAIGSLLALLLTGNSLLNNANVMIGFLILLGVVVNNGIILIDYANILRRRGYRRNRA 1001
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+S I+ + I + + A G I AI ++ +
Sbjct: 1002 LMTAGLSRIRPILITSITTIVAMFPMAM---------GNSEYAGAIGAPFAITVIGGLSF 1052
Query: 128 PAGLIAILLMI---LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ L+ ++L+ + L+N GL + + + H
Sbjct: 1053 -SALLTLILIPTVCMGLENTLQWY--RGLSLKVWVLH----------------GLLFMAG 1093
Query: 185 VEFLLM----VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + + ++ + I + ++ E +++ + +
Sbjct: 1094 AGCIWLYGGSLLWQSVYGVLLLAGIPGATYFMQASLRRARSKVIDPEADIHISVRNLVKI 1153
Query: 241 ISNYSNPPSFIFSQWKSAL 259
+ QWKS L
Sbjct: 1154 YDWPGR----VSRQWKSGL 1168
>gi|167749586|ref|ZP_02421713.1| hypothetical protein EUBSIR_00544 [Eubacterium siraeum DSM 15702]
gi|167657440|gb|EDS01570.1| hypothetical protein EUBSIR_00544 [Eubacterium siraeum DSM 15702]
Length = 673
Score = 36.7 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 56/164 (34%), Gaps = 6/164 (3%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
S + W K+ + + + + + + +F + G+I +++ +
Sbjct: 340 AVGVSASAWLKDKLPFLNGRLCDTL--CVSLCAALAGIPLSAIYFGTFSLAGIIVSVITV 397
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
P+ + + + A+ + + DI+ + + P T
Sbjct: 398 PLFTLCLSAMLIFALTG---GAVIPLAAIAHFCCDIMRIVFSAFAAVP-FLHFSCEPFTV 453
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
+TI V + C ++ ++ I I ++ FT + P +
Sbjct: 454 IITIAVISAVAAVCYLLLKKKYAVPILIVSLLCFTAVNTVLPQI 497
>gi|119775046|ref|YP_927786.1| hypothetical protein Sama_1911 [Shewanella amazonensis SB2B]
gi|119767546|gb|ABM00117.1| protein of unknown function UPF0118 [Shewanella amazonensis SB2B]
Length = 372
Score = 36.7 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 17/165 (10%), Positives = 46/165 (27%), Gaps = 9/165 (5%)
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
S+ K + Q N IR + A ++ F + L+ + + +L
Sbjct: 193 PSNRELARKVWGEMNQQIFNYIRGKVIEIIIVGAVSYVFFAFMGLRYSALLGVLTGLSVL 252
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-----RIPE 177
IP ++ + ++L + ++ I + +
Sbjct: 253 ----IPYVGATLVTLPIALVGFFQWGFSPEFGYLMLGYGIIQALDGNVLVPVLFSDAVDL 308
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ I + + + ++ +P + + D
Sbjct: 309 HPVIIIAAVLVFGGLWGFWGVFFAIPLASLVKAVVNVWPRNHTSD 353
>gi|291405071|ref|XP_002719025.1| PREDICTED: outer dense fiber of sperm tails 4-like [Oryctolagus
cuniculus]
Length = 272
Score = 36.7 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+S WT + + + + +G + + + F +P +GLI IL++
Sbjct: 114 EKDSSKLWTNQP-PFVVARIIFTLAVGVGFVLTIWLHLPYLPRFQRVPAFGLIGIILSVS 172
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWG--LDIIIHIAHRI 163
++F+ L + L +L L + W L ++ + + +
Sbjct: 173 EVTFIFSILMLFPVNLWLLELRKNFSVPIGWSYFLGWLVFVLYIV 217
>gi|239501675|ref|ZP_04660985.1| preprotein translocase subunit SecD [Acinetobacter baumannii AB900]
Length = 633
Score = 36.7 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 18/151 (11%)
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ I ++GLIAN + L+ ++ I L + + I +
Sbjct: 473 LSTQIGFLLVAIWMVVFFRLFGLIANFALVFNLAMILTIMSWIGASLTLPGIAGIVITI- 531
Query: 150 AWGLDI-----------IIHIA----HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+D ++ A ++ + I +++ T +V F+L
Sbjct: 532 GMAVDANVLICERIREEMLWGASPKQAIVAGYDRAYNT--IFDSNLTTFLVAFILFAIGT 589
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
I+ ++ I +FT + I
Sbjct: 590 GPIKGFAVTLMIGIICSMFTAITVTRAIVQI 620
>gi|162286720|ref|YP_001085921.2| preprotein translocase subunit SecD [Acinetobacter baumannii ATCC
17978]
gi|169632425|ref|YP_001706161.1| preprotein translocase subunit SecD [Acinetobacter baumannii SDF]
gi|169794704|ref|YP_001712497.1| preprotein translocase subunit SecD [Acinetobacter baumannii AYE]
gi|184159486|ref|YP_001847825.1| preprotein translocase subunit SecD [Acinetobacter baumannii ACICU]
gi|213157925|ref|YP_002320723.1| protein-export membrane protein SecD [Acinetobacter baumannii
AB0057]
gi|215482291|ref|YP_002324473.1| protein-export membrane protein SecD [Acinetobacter baumannii
AB307-0294]
gi|260557109|ref|ZP_05829325.1| protein-export membrane protein SecD [Acinetobacter baumannii ATCC
19606]
gi|301347239|ref|ZP_07227980.1| preprotein translocase subunit SecD [Acinetobacter baumannii AB056]
gi|301511795|ref|ZP_07237032.1| preprotein translocase subunit SecD [Acinetobacter baumannii AB058]
gi|332852197|ref|ZP_08434002.1| export membrane protein SecD [Acinetobacter baumannii 6013150]
gi|332868165|ref|ZP_08438044.1| export membrane protein SecD [Acinetobacter baumannii 6013113]
gi|332873841|ref|ZP_08441782.1| export membrane protein SecD [Acinetobacter baumannii 6014059]
gi|169147631|emb|CAM85494.1| preprotein translocase, IISP family, part of the channel
[Acinetobacter baumannii AYE]
gi|169151217|emb|CAO99900.1| preprotein translocase, IISP family, part of the channel
[Acinetobacter baumannii]
gi|183211080|gb|ACC58478.1| Preprotein translocase subunit SecD [Acinetobacter baumannii ACICU]
gi|193078348|gb|ABO13319.2| preprotein translocase IISP family, part of the channel
[Acinetobacter baumannii ATCC 17978]
gi|213057085|gb|ACJ41987.1| protein-export membrane protein SecD [Acinetobacter baumannii
AB0057]
gi|213985691|gb|ACJ55990.1| protein-export membrane protein SecD [Acinetobacter baumannii
AB307-0294]
gi|260409215|gb|EEX02517.1| protein-export membrane protein SecD [Acinetobacter baumannii ATCC
19606]
gi|322509399|gb|ADX04853.1| secD [Acinetobacter baumannii 1656-2]
gi|323519420|gb|ADX93801.1| preprotein translocase subunit SecD [Acinetobacter baumannii
TCDC-AB0715]
gi|332729327|gb|EGJ60667.1| export membrane protein SecD [Acinetobacter baumannii 6013150]
gi|332733509|gb|EGJ64677.1| export membrane protein SecD [Acinetobacter baumannii 6013113]
gi|332737945|gb|EGJ68831.1| export membrane protein SecD [Acinetobacter baumannii 6014059]
Length = 633
Score = 36.7 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 18/151 (11%)
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ I ++GLIAN + L+ ++ I L + + I +
Sbjct: 473 LSTQIGFLLVAIWMVVFFRLFGLIANFALVFNLAMILTIMSWIGASLTLPGIAGIVITI- 531
Query: 150 AWGLDI-----------IIHIA----HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+D ++ A ++ + I +++ T +V F+L
Sbjct: 532 GMAVDANVLICERIREEMLWGASPKQAIVAGYDRAYNT--IFDSNLTTFLVAFILFAIGT 589
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
I+ ++ I +FT + I
Sbjct: 590 GPIKGFAVTLMIGIICSMFTAITVTRAIVQI 620
>gi|20502745|gb|AAM22601.1|AF390573_14 hypothetical protein [Vibrio cholerae O37]
Length = 780
Score = 36.7 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 35/113 (30%), Gaps = 17/113 (15%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGI----SAIGYFYSIPKMIYSSESHNTWTW 70
I + L LFDF+F S + I +G Y P +I +
Sbjct: 349 AAIVFLVLLR---------LFDFSFISSFVSIIPVLGTLGAHYWWPAVIVPTTFLVAIGV 399
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + + + + F+ + + ++++ I+
Sbjct: 400 ANLKNGEARVWPALIFLLIGV----FGFLYVYRFYGLTELNVSFKVISLSIIG 448
>gi|164686310|ref|ZP_02210340.1| hypothetical protein CLOBAR_02748 [Clostridium bartlettii DSM
16795]
gi|164601912|gb|EDQ95377.1| hypothetical protein CLOBAR_02748 [Clostridium bartlettii DSM
16795]
Length = 413
Score = 36.7 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 27/140 (19%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + KK D + I + ++ P +++ +F + +I YF
Sbjct: 228 VFLFKKRDGITTLSLIASVLIINNPYT-----MYNISFQLSFLATLSILYF--------- 273
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
I + I + + + F I + ++ NI+ IP
Sbjct: 274 -----------NKIIIKKLKFNIISMT-IAANILTMPIVYYVFGGIALLSILGNIVIIPF 321
Query: 122 LSFVVIPAGLIAILLMILSL 141
+ +++ + +ILL ++L
Sbjct: 322 I-GIIMNLSIFSILLFEINL 340
>gi|119963678|ref|YP_947984.1| ComEC/Rec2-related domain-containing protein [Arthrobacter
aurescens TC1]
gi|119950537|gb|ABM09448.1| putative ComEC/Rec2-related domain protein [Arthrobacter aurescens
TC1]
Length = 579
Score = 36.7 bits (83), Expect = 6.5, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 51/195 (26%), Gaps = 18/195 (9%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
DP + G L+ G S + ++ I P M +
Sbjct: 313 GPDPSVLRAAVMGTVGLAALIGGLR------GRSLTFLCLATIVLLLLDPSMAANVGFLL 366
Query: 67 TWTWKKISSIKQSFLNEIR-----------ANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
+ + + + + ++ Y LIAN
Sbjct: 367 SVLATLGIVLLATRVASWMPSSVPRWLAAGVAVPLSAQLLCGPVIVALQPQCTPYALIAN 426
Query: 116 ILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++A P+++ V I + L L L +P V + +A +
Sbjct: 427 VVAGPLVAPVTILGTIAVPLAATLPWLAVVPIAVAGTCAGAVAGLARFFAHMPGAALPWA 486
Query: 175 IPETSFVTIVVEFLL 189
V + LL
Sbjct: 487 EGPAGVVAMATMSLL 501
>gi|254410830|ref|ZP_05024608.1| Spermine/spermidine synthase family [Microcoleus chthonoplastes PCC
7420]
gi|196182185|gb|EDX77171.1| Spermine/spermidine synthase family [Microcoleus chthonoplastes PCC
7420]
Length = 530
Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 19/192 (9%), Positives = 51/192 (26%), Gaps = 21/192 (10%)
Query: 40 SSYYK-GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
+ + I I + + + W + + +F+ +
Sbjct: 62 ALSFGVAIGGFLAAMGIGSYLSQFIASKSPPWLQQRQLLVAFVQVELLMAPLTALLPLGL 121
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F + + GL + + IL+ + +P + L + L ++
Sbjct: 122 FALFVVNGFLWLGLFLVTILLGILAGLEVPLLTRVLELE---------EGVREALAGVLA 172
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK----------TNIRHIGSIMIGIT 208
+ + + F+L +R G + + +
Sbjct: 173 L-DYVGALLGSLLFPVLLLPLIGLFPAAFVLGALPAFMVFAIGQQFPRLRRWGYLGLSLG 231
Query: 209 IIILFTFPYSFS 220
II+ + P +
Sbjct: 232 IILTLSAPAAIP 243
>gi|253996709|ref|YP_003048773.1| histidine kinase [Methylotenera mobilis JLW8]
gi|253983388|gb|ACT48246.1| histidine kinase [Methylotenera mobilis JLW8]
Length = 678
Score = 36.7 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 68/218 (31%), Gaps = 27/218 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + S+ +P S ++++ + + G A+
Sbjct: 163 SFYLWEGLSSSALTSVGLPHFSQSVLQVAHMLPAYVNTVAPVIHPSNPSALNYAGDAAQR 222
Query: 98 IFLIK-----------HFHCIPVYGLIANILAIPILSFVVIPAGLIAI-----LLMILSL 141
+ HF+ I ++AN + ++ G+ A+ L +S
Sbjct: 223 LISYSPRKVDFFGPPRHFNQISYVDVLANKYSSDFFRDKIVLVGVTALGGGDVLYTPVSS 282
Query: 142 DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF-VTIVVEFLLMVFCKTN---I 197
+ P + + A+ I+ + + P + + + + +
Sbjct: 283 YSQPMPGIEFH-------ANAIAAMQDASLVVDAPGWLVSLLCALLAMFPLLWLPRMQPL 335
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+ + I + +IIL + + I G L A++
Sbjct: 336 KSVVMIAVYFPMIILASLSIVHWWQVWIPVSGALAAIL 373
>gi|309777788|ref|ZP_07672736.1| putative membrane protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308914472|gb|EFP60264.1| putative membrane protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 204
Score = 36.7 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 45/175 (25%), Gaps = 14/175 (8%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ + + P P + F I G+ I
Sbjct: 19 ISILGALAFLVMMFEIPLPFAPAFYKLGFDEVIVLIG--GFALGPWAAICIEALKIALNL 76
Query: 71 KKISSIKQSFLNEIRANIGTYGSA-SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+I IG + ++ + +YGLI + + +
Sbjct: 77 IIGGTITMGVGELTNFLIGLAFVLPATLMYQREKTRKHALYGLITGTICMTV-------- 128
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTI 183
+ LL + M LD II H ++ + + + T F +
Sbjct: 129 --LGGLLNYFVMLPAYAYFMNMPLDQIIAFGHAVNPNINGLLALVLMATTPFNLL 181
>gi|87120559|ref|ZP_01076453.1| putative multidrug resistance protein [Marinomonas sp. MED121]
gi|86164202|gb|EAQ65473.1| putative multidrug resistance protein [Marinomonas sp. MED121]
Length = 422
Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 55/176 (31%), Gaps = 22/176 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR------ANIGTY 91
+F+ + IS + Y I + I+ I + LN R +
Sbjct: 249 SFAGLFAFISGSPFVYMSLYQISPQDYSVLIALNAIAMISTNLLNARRLGHIDPTIKLIW 308
Query: 92 GSASASIFLIKHFHCIP-----VYGLIANILAIPILSFVV--IPAGLIAILLMILSLDNI 144
I + F Y + +L + +L F G+++ L +
Sbjct: 309 AGIGLGIIGLYLFITASLALPLPYIALGVVLYMAMLGFTSANAMTGVLSNSGQYAGLASG 368
Query: 145 PFGVMAWGLD----IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
GVM +GL II +++ ++ F + I F + +T
Sbjct: 369 LNGVMQFGLGALTSAIISLSNSVNSLPMAFTMAASG-----LITCAFAFALIKQTR 419
>gi|172061375|ref|YP_001809027.1| bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III
C-methyltransferase [Burkholderia ambifaria MC40-6]
gi|171993892|gb|ACB64811.1| protein of unknown function DUF513 hemX [Burkholderia ambifaria
MC40-6]
Length = 655
Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 31/278 (11%), Positives = 69/278 (24%), Gaps = 22/278 (7%)
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII-------HIAHRISVAHNE 169
LA + P IA + LD + + L I + +A ++ N
Sbjct: 26 LAEAGCDVLEFPLIDIAPVDDPAPLDAAFAALGDYALVIFVSPNAIDRALAQYGAIWPNA 85
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
+G + S + + + + + + + G
Sbjct: 86 LPVGVVGPGSVAALERHGIAAPAHRV------IAPQAPADGGVPHYDSENLFASIEAAFG 139
Query: 230 NLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSM 289
AL K LI ++ + + A A + + L +
Sbjct: 140 GAQALAGKRVLIVRGDGGREWLAERLREAGADVTLVAAYRRVVPEPRVGAWERVHALLAG 199
Query: 290 QPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLI 349
P +L R+ + D + + + ++ + +L
Sbjct: 200 APHAWLVTSSEG----VRNLHELARTHLNDAEIEALKHAPLV---TPHPRIEQTARALGF 252
Query: 350 TPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHF 387
L G+ + I+ +A
Sbjct: 253 DRITL--TGAGDERIVRAFRTMADEAVQPATAAPVTKR 288
>gi|115524758|ref|YP_781669.1| lipoyl synthase [Rhodopseudomonas palustris BisA53]
gi|122296039|sp|Q07MZ5|LIPA_RHOP5 RecName: Full=Lipoyl synthase; AltName: Full=Lip-syn; Short=LS;
AltName: Full=Lipoate synthase; AltName: Full=Lipoic
acid synthase; AltName: Full=Sulfur insertion protein
lipA
gi|115518705|gb|ABJ06689.1| lipoic acid synthetase [Rhodopseudomonas palustris BisA53]
Length = 319
Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 37/138 (26%), Gaps = 7/138 (5%)
Query: 251 IFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
I W T + ++ + L +P +
Sbjct: 69 IGECWDRKHATFMIMGDTCTRACAFCNVKTGMPAALDGAEPANV-----AEATAKLGLAH 123
Query: 311 IVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSND 370
+V +D + + I T ++TP+ L+K G+LEI + +
Sbjct: 124 LVITSVDRDDLADG-GAAHIAATIRAVRERCPSTTIEVLTPDFLRKDGALEIVVAAKPDV 182
Query: 371 NDKVKFIIKSAIENLHFP 388
+ A P
Sbjct: 183 FNHN-LETVPARYLEVRP 199
>gi|86739965|ref|YP_480365.1| ComEC/Rec2-related protein [Frankia sp. CcI3]
gi|86566827|gb|ABD10636.1| ComEC/Rec2-related protein [Frankia sp. CcI3]
Length = 872
Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 14/150 (9%), Positives = 42/150 (28%), Gaps = 4/150 (2%)
Query: 44 KGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH 103
++G+ S+ W + + ++ + + L
Sbjct: 410 ALALSVGFALSVLATAGMIVLAPGWRDALARRLPARIAEVL--SVAAAAQLACTPVLAWT 467
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGL-IAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ + + AN+LA+P ++ + L + + + S + + ++ +A R
Sbjct: 468 GGGLSLVAVPANVLAVPAVAPATVLGVLTLVVAAVSPSAAGLLAHLADLPCWWLVTVAGR 527
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ +V
Sbjct: 528 CADLPAATLPWPTGVMGAGV-AAGVAWLVV 556
>gi|116072297|ref|ZP_01469564.1| ComEC/Rec2-related protein [Synechococcus sp. BL107]
gi|116064819|gb|EAU70578.1| ComEC/Rec2-related protein [Synechococcus sp. BL107]
Length = 612
Score = 36.7 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 12/123 (9%), Positives = 31/123 (25%), Gaps = 11/123 (8%)
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFVTIVVE 186
+ LL + + ++I + H IS + G + +
Sbjct: 352 MGLAVIALLFPHPFLVVLAWPVQQLAALLIALVHWISHWPAAQLLTGHPQPWVVLMMAFG 411
Query: 187 FL-LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS 245
+ ++ +R G + + + + G +VA +
Sbjct: 412 LIPWVINSHRGLRGFGVVTLLSAVFLHAVVQL---------GDGVVVASRFGRHWLLARH 462
Query: 246 NPP 248
Sbjct: 463 RGR 465
>gi|253755798|ref|YP_003028938.1| competence protein [Streptococcus suis BM407]
gi|251818262|emb|CAZ56071.1| putative competence protein [Streptococcus suis BM407]
Length = 745
Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 44/128 (34%), Gaps = 15/128 (11%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSI---KQSFLNEIRANIGTYGSASASIFLI 101
++ +P+ + ++ T+T+ + ++ + + A S L+
Sbjct: 310 AVTVFICLLILPRFLLTAGGVLTFTYAFLLTVFDFEDLGQVKKAAVESLSISLGILPVLM 369
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI-----------LSLDNIPFGVMA 150
+F+ ++ + + +++P + LL + ++ I V
Sbjct: 370 TYFYAFQPLSILLTFVFSFVFDVLLLPGLSVIFLLSPVVKMTWINGFFVFMEKIIVWVAD 429
Query: 151 WGLD-III 157
GL I+
Sbjct: 430 LGLRPWIL 437
>gi|253751472|ref|YP_003024613.1| competence protein [Streptococcus suis SC84]
gi|253753373|ref|YP_003026514.1| competence protein [Streptococcus suis P1/7]
gi|251815761|emb|CAZ51362.1| putative competence protein [Streptococcus suis SC84]
gi|251819619|emb|CAR45351.1| putative competence protein [Streptococcus suis P1/7]
gi|319757889|gb|ADV69831.1| putative competence protein [Streptococcus suis JS14]
Length = 745
Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 44/128 (34%), Gaps = 15/128 (11%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSI---KQSFLNEIRANIGTYGSASASIFLI 101
++ +P+ + ++ T+T+ + ++ + + A S L+
Sbjct: 310 AVTVFICLLILPRFLLTAGGVLTFTYAFLLTVFDFEDLGQVKKAAVESLSISLGILPVLM 369
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI-----------LSLDNIPFGVMA 150
+F+ ++ + + +++P + LL + ++ I V
Sbjct: 370 TYFYAFQPLSILLTFVFSFVFDVLLLPGLSVIFLLSPVVKMTWVNGFFVFMEKIIVWVAD 429
Query: 151 WGLD-III 157
GL I+
Sbjct: 430 LGLRPWIL 437
>gi|325125588|gb|ADY84918.1| Membrane protein, putative [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 953
Score = 36.3 bits (82), Expect = 7.4, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 57/260 (21%), Gaps = 17/260 (6%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKG-ISAIGYFYSIPKMIYSSESHNTWT 69
+ +A L P S F + + +G + + +
Sbjct: 93 YTIGDVFAYLALLFPTSHLV------FAYQLILLLRLYCVGLAFVYFARHFDFKDSVVLI 146
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + L A + ++ + G A P+ V
Sbjct: 147 GSGVYMVNAYLLYAALAQPMFTTTFILFPLIVVQLERLLQGGS-----AWPLFGVFVWML 201
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
L +L L I + + WGL I V + LL
Sbjct: 202 VSNYYLAFVLGLGAIIYLFLRWGLAYWKKIPFW-----PTIKKLFFASLGAVLLSAGLLL 256
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ + Y P LI + L S
Sbjct: 257 PELLAVVNSTRTGSQFANGLTFYPAYYYLLLPKELIDGDNWKLMFWSALGLASIILPALV 316
Query: 250 FIFSQWKSALITPFHEAPHV 269
++F W+ +
Sbjct: 317 YLFRNWRKYRLVAASLLLGA 336
>gi|108563733|ref|YP_628049.1| competence locus E [Helicobacter pylori HPAG1]
gi|107837506|gb|ABF85375.1| competence locus E [Helicobacter pylori HPAG1]
Length = 437
Score = 36.3 bits (82), Expect = 7.4, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 53/171 (30%), Gaps = 31/171 (18%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF F G+ I F ++ + + S +++ I ++
Sbjct: 278 LFSVGFLLSVCGVWYIFLFLKHTEIFFKTSSFLARSFQAI-------------SLSALVF 324
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ I + F Y L + L + + F +++ L + L ++ ++ L
Sbjct: 325 LNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFF-----PLSLFLHAVGLGSLLDHLLNMPL 379
Query: 154 D----------IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
++ + +++ F + S + F L +
Sbjct: 380 TIPTISIPSPLWLLGVHLFLTILSARFFKVYL---SMNVLSAGFFLYCCYQ 427
>gi|117920098|ref|YP_869290.1| hypothetical protein Shewana3_1651 [Shewanella sp. ANA-3]
gi|117612430|gb|ABK47884.1| protein of unknown function UPF0118 [Shewanella sp. ANA-3]
Length = 366
Score = 36.3 bits (82), Expect = 7.4, Method: Composition-based stats.
Identities = 15/169 (8%), Positives = 46/169 (27%), Gaps = 9/169 (5%)
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
++ K + Q N IR + + ++ F + L+ + + +L
Sbjct: 193 PTNRQLARKVWFEMHQQIFNYIRGKVIEIVIVGVASYIFFAFMGLRYSALLGVLTGLSVL 252
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-----RIPE 177
IP ++ + + L + ++ I + +
Sbjct: 253 ----IPYVGATLVTLPIMLVAFFQWGFSSEFGYLMLGYGIIQALDGNVLVPILFSDAVDL 308
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ I + + + ++ +P + + I+
Sbjct: 309 HPVIIIAAVLVFGGLWGVWGVFFAIPLASLVKAVINAWPKTEIEPVAIT 357
>gi|229542785|ref|ZP_04431845.1| copper resistance protein CopC [Bacillus coagulans 36D1]
gi|229327205|gb|EEN92880.1| copper resistance protein CopC [Bacillus coagulans 36D1]
Length = 548
Score = 36.3 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 13/174 (7%), Positives = 43/174 (24%), Gaps = 14/174 (8%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
+ + I+ +F+S+ + + + ++ L + + ++
Sbjct: 156 ASFACIAG-MFFFSLFIVPREAGHNPYIKKASGKMLQMGILFLAVGTLLSLPLTASIELT 214
Query: 101 IKHFHCIPVYGLIANILAIPILS-FVVIPAGLIAILLMILSLD------NIPFGVMAWGL 153
H + G++ + ++ L+ L + + F + L
Sbjct: 215 TSWRH-VLHAGVLKSFTTSTAFGHIWLVQMALLLCLAASVFFHSKTKNPALFFAALVPAL 273
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
++ P + L ++ M
Sbjct: 274 GWVL-----TKALIGHAASAPHPVWQVTLDFLHLLSAEIWIGSLAMFSVFMPLA 322
>gi|262281062|ref|ZP_06058844.1| protein-export membrane protein SecD [Acinetobacter calcoaceticus
RUH2202]
gi|262257293|gb|EEY76029.1| protein-export membrane protein SecD [Acinetobacter calcoaceticus
RUH2202]
Length = 633
Score = 36.3 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 18/151 (11%)
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ I ++GLIAN + L+ ++ I L + + I +
Sbjct: 473 LSTQIGFLLVAIWMVVFFRLFGLIANFALVVNLAMILTVMSWIGASLTLPGIAGIVITI- 531
Query: 150 AWGLDI-----------IIHIA----HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+D ++ A ++ + I +++ T +V F+L
Sbjct: 532 GMAVDANVLICERIREEMLWGASPKQAIVAGYDRAYNT--IFDSNLTTFLVAFILFAIGT 589
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
I+ ++ I +FT + I
Sbjct: 590 GPIKGFAVTLMIGIICSMFTAITVTRAIVQI 620
>gi|298529514|ref|ZP_07016917.1| cell division protein FtsK/SpoIIIE [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510950|gb|EFI34853.1| cell division protein FtsK/SpoIIIE [Desulfonatronospira
thiodismutans ASO3-1]
Length = 709
Score = 36.3 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 19/120 (15%)
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-TIVV 185
IP ++ L ++L + + + + + AH + + +G S V + V
Sbjct: 10 IPGTVMFFLALLLGVSLAGYSSLDPTFNQQVGSAHTV--QNPAGTVGAYLGGSLVELLGV 67
Query: 186 EFL--------------LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKG 229
L V R +G +I+ FP + D+ IS G
Sbjct: 68 GSLVVPLFFVYLGLYLFWPVLQLAWWRWLGLFFCFAALIVWAEFPRVQAFTQDMEISGGG 127
>gi|238893829|ref|YP_002918563.1| putative cell division protein [Klebsiella pneumoniae NTUH-K2044]
gi|238546145|dbj|BAH62496.1| putative transmembrane protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 549
Score = 36.3 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 40/343 (11%), Positives = 93/343 (27%), Gaps = 42/343 (12%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG--------- 89
F+ Y GI FY + S + W I + I +
Sbjct: 23 FACYI-GICLNLAFYRQVFPVLPVNSLHNWLVFLSMPIVAISVMNILTTLASFLKLDRLV 81
Query: 90 ---TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++++ + I +F + +I NIL + L ++ +L L +
Sbjct: 82 ISLFILLSASAQYFIWNFGVVIDRSMITNILDTTPAESFAL---LSGEMIAVLGLSGVLA 138
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL----MVFCKTNIRHIGS 202
+AW + I + I ++ + I+V L + N + S
Sbjct: 139 VFVAWWVKIRKPATRWRGA---AMRLLNIAVSALLIILVAALFYKDYASVFRNNKELVKS 195
Query: 203 IMIGITIIILFTFPYSFSPD----LLISEKGNLVALVDKNTL-------ISNYSNPPSFI 251
+ +I+ + ++ D + I E A++ + S +F
Sbjct: 196 LSPSNSIVAVNSWYAHHRMDNLPLVKIGEDATQKAVMHNAPRKNLTIVVLGETSRADNFS 255
Query: 252 F-------SQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVG 304
+ + + R+ + ++
Sbjct: 256 LGGYSRDTNPLMRQDGVIYFPHTTSCGTATAVSVPCMFSNMPRAHYDEELAHHQEGVLDI 315
Query: 305 CHRSDVIVGVLKRKDMIRLSCQLS-DILITTIRDINTKLCNVS 346
R+ + V + +C +T ++ +
Sbjct: 316 LQRAGIQVLWNDNDGGCKGACDRVPHQNVTDLKLTGQCIDGEC 358
>gi|194365173|ref|YP_002027783.1| DNA internalization-related competence protein ComEC/Rec2
[Stenotrophomonas maltophilia R551-3]
gi|194347977|gb|ACF51100.1| DNA internalization-related competence protein ComEC/Rec2
[Stenotrophomonas maltophilia R551-3]
Length = 799
Score = 36.3 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 64/241 (26%), Gaps = 40/241 (16%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ L P G F + G+ + + +
Sbjct: 341 LARAAVVMLLPAPLSVLAAG-----FWLSFGGVLWLLWCLPRTGPEGVGGGLRGF----- 390
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
S + F G + N+ IP + +V+P L+
Sbjct: 391 ------------LAAQGVASLGLLPLCVALFGGTARLGPLVNLPIIPWWTLLVVPLSLLG 438
Query: 134 ILLMILS------LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
L L G+ + + +A + + P + ++
Sbjct: 439 TGLHALHDGAGRWAWRAAAGLFEFSWQALQPLAQHPQAM---WWLAEAPRWAVPAALLGV 495
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP-----DLLISEKGNLVALVDKNTLIS 242
+ R G + G+ + + +P +P +LL+ + G A++ + +
Sbjct: 496 FWWLLP----RGNGGGLAGLLLCLPLLWPAREAPAEGELELLVHDVGQGTAVLLRTARHA 551
Query: 243 N 243
Sbjct: 552 L 552
>gi|114321629|ref|YP_743312.1| hypothetical protein Mlg_2482 [Alkalilimnicola ehrlichii MLHE-1]
gi|114228023|gb|ABI57822.1| protein of unknown function UPF0118 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 359
Score = 36.3 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 23/198 (11%), Positives = 61/198 (30%), Gaps = 16/198 (8%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS----SIKQSFLNEIRANIGTYG 92
F+F S ++ + Y +P M++ + +S + R G
Sbjct: 151 FSFQSVVVIVTLLVYMVLVPFMVFFFLKDKRLMLQWLSDHLPRDRGLASEVWREVDLQIG 210
Query: 93 SASASIFL------IKHFHCIPVYGL-IANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
+ F+ F ++GL A +LA+ + V++P A++ + +++
Sbjct: 211 NYVRGKFVEIIIVWAVTFITFSLFGLQFAMLLAVMVGLSVIVPYVGAAVVTLPVAIIAYF 270
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIG-----RIPETSFVTIVVEFLLMVFCKTNIRHI 200
++ ++ I + + IV +
Sbjct: 271 QWGVSPEFAWLMVAYFIIQALDGNVLVPLLFSEAVNLHPVAIIVAILVFGGVWGFWGVFF 330
Query: 201 GSIMIGITIIILFTFPYS 218
+ + ++ +P +
Sbjct: 331 AIPLATLIQAVIKAWPSA 348
>gi|317010041|gb|ADU80621.1| competence protein ComEC [Helicobacter pylori India7]
Length = 437
Score = 36.3 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 45/168 (26%), Gaps = 45/168 (26%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF F G+ I F + + + S FL I
Sbjct: 278 LFSVGFLLSVCGVWYIFLFLKHTQAFFKTSS---------------FLIRSFQAISLSAL 322
Query: 94 ASASIFLIKH--FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
++ +I H F Y L + IP GLI I+ LSL +
Sbjct: 323 VFLNMLIIAHAFFPMFSPYQLFS------------IPLGLIFIVFFPLSL---LLHAVGL 367
Query: 152 G--LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF-LLMVFCKTN 196
G LD I+ +P ++ L +
Sbjct: 368 GSLLDRIL-------SMPLAIPTISVPSP---LWLLGAHLFLTILSAR 405
>gi|295692721|ref|YP_003601331.1| competence protein comec [Lactobacillus crispatus ST1]
gi|295030827|emb|CBL50306.1| Competence protein ComEC [Lactobacillus crispatus ST1]
Length = 762
Score = 36.3 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 52/148 (35%), Gaps = 19/148 (12%)
Query: 41 SYYKGISA--IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
+ + I + +P++ ++ + ++ + F + + +
Sbjct: 314 ASIDLLGLTCILHLLVVPRLFLATGALLSYILALGLQLTDKFGS---FKQAILLNILLTP 370
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
L+ F+ + +I N+L +P +++V+P I++ L V+ L++
Sbjct: 371 LLLLFFYQVNFLTVIFNMLVVPYFNWIVLPIAFFNIVM--FGLTKDFAPVLEKVLEL--- 425
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVE 186
E IG++ T +
Sbjct: 426 ---------GEKIIGQLSATKLGLLTFG 444
>gi|206896271|ref|YP_002246979.1| competence protein ComEC/Rec2, putative [Coprothermobacter
proteolyticus DSM 5265]
gi|206738888|gb|ACI17966.1| competence protein ComEC/Rec2, putative [Coprothermobacter
proteolyticus DSM 5265]
Length = 584
Score = 36.3 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 52/160 (32%), Gaps = 11/160 (6%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
S + + FH I + G +L +P+ + + L ++M L L + +
Sbjct: 266 SVKISLTLLPASLLFFHSISLLGAFFTVLLVPVFTLLYALGILY--VIMPLRLLSYLVDM 323
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
+ + + H + + + + I+V +L + + +
Sbjct: 324 VGMAILSL----HELVELLPAWVLLNFGSREVLVILVGVVLTALLRRWW-----LPVLTC 374
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP 248
I +L S L + + + L+ + S+
Sbjct: 375 IALLLLPAQSRVIFLDVGQGSATLVQKGSYGLLIDTSDRA 414
>gi|296236708|ref|XP_002763452.1| PREDICTED: plexin-B3 [Callithrix jacchus]
Length = 1867
Score = 36.3 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 15/148 (10%), Positives = 36/148 (24%), Gaps = 16/148 (10%)
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V +V + + R+ + + P G L+
Sbjct: 944 AVPGEAAVLVVFGHVQRTLLTSPFRYTANPQLIAA-----------EPSASFRGGGRLIR 992
Query: 234 LVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRK 293
+ + + S W A + + + + + +Q
Sbjct: 993 VRGTGLDAAQRP-----LLSVWLEADGMVQASRIQPRDPEPRRSCGAPAADPQACIQLGG 1047
Query: 294 FLCIKKSFCVGCHRSDVIVGVLKRKDMI 321
L + C S ++ D
Sbjct: 1048 GLLQCSTVCSVNSSSLLLCWSPAVPDGA 1075
>gi|237740456|ref|ZP_04570937.1| COME operon protein 3 [Fusobacterium sp. 2_1_31]
gi|229422473|gb|EEO37520.1| COME operon protein 3 [Fusobacterium sp. 2_1_31]
Length = 378
Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 17/133 (12%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
F +F Y + AI Y + + I +KKI + T
Sbjct: 231 FSLSFQLSYGAMIAIIYIFPYVRKI---------NYKKIKVLDYFL-------FTTTIQI 274
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ +F I LI+N++ +P+ SF I IA+ L L + ++ +
Sbjct: 275 FLIPITVYYFSTIQFLSLISNLILLPLASF-YISINYIALFLENFYLSFLLKPIIKISYN 333
Query: 155 IIIHIAHRISVAH 167
+I++ S
Sbjct: 334 FLIYLIDFFSKFS 346
>gi|54022277|ref|YP_116519.1| hypothetical protein nfa3130 [Nocardia farcinica IFM 10152]
gi|54013785|dbj|BAD55155.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 403
Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 62/190 (32%), Gaps = 11/190 (5%)
Query: 37 FNFSSYYKGI-SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
+ + + + +A +IP+ + + + + + +
Sbjct: 79 LSRVAMFVAMGAAFIAALTIPEAFHDMPGG------WFGPLVFAIAYLVARLVHLWVFWL 132
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
AS + + +GL + + +L + G++ + L + ++ M G D
Sbjct: 133 ASAEDAQLRGQVARWGLGSITIGTTLLVIAAMTHGVVQMALWLAAIVGDMLWTMVAGDDW 192
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
++ A + + I + E+ + + + + M+G+ + L +
Sbjct: 193 RLNSAKHFAERYGLIIIVALGESIVSI----GIGVAGLPISWPITVAAMLGLAVSGLLWW 248
Query: 216 PYSFSPDLLI 225
Y + +
Sbjct: 249 AYFDVASIAV 258
>gi|332560607|ref|ZP_08414925.1| gamma-glutamyl phosphate reductase [Rhodobacter sphaeroides WS8N]
gi|332274405|gb|EGJ19721.1| gamma-glutamyl phosphate reductase [Rhodobacter sphaeroides WS8N]
Length = 420
Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 22/175 (12%), Positives = 45/175 (25%), Gaps = 14/175 (8%)
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWK 256
IR + + + + +I + L + GN V L + + +
Sbjct: 113 IRRVRTPLGVVGVIYESRPNVTADAGALCLKSGNAVILRGGSESFHSSGAIHA-ALQDGL 171
Query: 257 SALITP-------FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSD 309
P E L+ + + + V H
Sbjct: 172 RQAGLPVDAIQRVPTRDRAAVAEMLRMVEHIDVIVPRGGKGLVGLVQAEARVPVFAHLEG 231
Query: 310 VIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCN--VSLLITPEILQKQGSLEI 362
+ + + + ++ + T +C LLI L K G + I
Sbjct: 232 ICHVYADGDADL----EKARRVVLNAKTRRTGICGSAECLLIDRAFLAKNGPVLI 282
>gi|297570679|ref|YP_003696453.1| ABC transporter [Arcanobacterium haemolyticum DSM 20595]
gi|296931026|gb|ADH91834.1| ABC-2 type transporter [Arcanobacterium haemolyticum DSM 20595]
Length = 311
Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 59/211 (27%), Gaps = 25/211 (11%)
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+S + W I + Q F+ F + F + + L I+++
Sbjct: 66 KDSFLGFAWTLIRPLVQLFIYYFAIGKILGAERGIPDFGVYVFAGLTAWALFNEIVSMGT 125
Query: 122 LSFV--------------VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
S V + P L+ I A+ + I+ +
Sbjct: 126 SSIVSNGGIIKKVYLPREIFPLAAAGAALINFGAQLIVLLTGAFFIRGILIV-------- 177
Query: 168 NEFCIGRIPETSFVTI-VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
I V L + +R ++ +I ++ P +S +++ +
Sbjct: 178 PFLIYVPIGVAILVVWGSALALWLSAVNVRMRDTQYLVEVGLLIGMWLSPIVYSFEMVKN 237
Query: 227 EKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
+ +A + + F WK
Sbjct: 238 AANSTIAAIY--SWNPITIAVSDFQAGIWKQ 266
>gi|238060581|ref|ZP_04605290.1| DNA internalization-related competence protein ComEC/Rec2
[Micromonospora sp. ATCC 39149]
gi|237882392|gb|EEP71220.1| DNA internalization-related competence protein ComEC/Rec2
[Micromonospora sp. ATCC 39149]
Length = 368
Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 21/225 (9%), Positives = 60/225 (26%), Gaps = 15/225 (6%)
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHR 162
+ + + AN+LA+P ++ + G++A +L + + +W ++ +A
Sbjct: 67 GTVSLVAVPANLLAVPAIAPATV-LGVVAAVLSPVWPGGAEFAAWLASWPAWWLVTVARY 125
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ + + + ++ + + ++ T P
Sbjct: 126 GARLPAGTLSWPDGTPGALLLAGLTVALLIAGRRPVVRRLVAVVAVAVVAGTLPVRLVAG 185
Query: 223 LLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSL 282
++ VA A++ P L+ +
Sbjct: 186 GWPPDRWVAVACAVGQGDALVLPVAAG-------RAVVVDAGPDPAAVDGCLRRLGVREV 238
Query: 283 KEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQL 327
+L S I + + V ++ +
Sbjct: 239 PLLLFSHFH-----IDHTGGIAGVFRGRRVAAVRTPQWPEPAAGR 278
>gi|238062858|ref|ZP_04607567.1| phage tail protein [Micromonospora sp. ATCC 39149]
gi|237884669|gb|EEP73497.1| phage tail protein [Micromonospora sp. ATCC 39149]
Length = 703
Score = 36.3 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 27/259 (10%), Positives = 57/259 (22%), Gaps = 9/259 (3%)
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+ S + G G L ++ N + + IL+ + +
Sbjct: 391 WLSRNSGWVGPLATGLGLLAGIIGLIVLGTKLWAAAQIALNVAMMLNPVGLIILAVIGLI 450
Query: 129 AGLIAILLMILSLD--NIPFG-----VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
A ++ + L W +D I+ + +G S
Sbjct: 451 AIIVGLWLKFEGFRNFWKAVWEGIVTAFQWAVDWIVGGWTWLFETVVALAVGWWELFSGF 510
Query: 182 TIVVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + + R G I + + G L A +
Sbjct: 511 WGAIGDFFVGLFQGWWRLFTGFWSAVFGGIADAWKWVTAKVSEFVDYIGGLPARIRAKAR 570
Query: 241 ISNYSNPPSF-IFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+F W F + +L + +
Sbjct: 571 GMFDGLKDAFRSAINWMIGKWNSFSLTLGGGSVLGMDIPSVTLATPNIPYLAKGGHILDA 630
Query: 300 SFCVGCHRSDVIVGVLKRK 318
V R +V + +
Sbjct: 631 GMAVVGERGPELVHLGRGA 649
>gi|119944689|ref|YP_942369.1| permease [Psychromonas ingrahamii 37]
gi|119863293|gb|ABM02770.1| permease [Psychromonas ingrahamii 37]
Length = 361
Score = 36.3 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 19/173 (10%), Positives = 51/173 (29%), Gaps = 8/173 (4%)
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + +N IR I + F + L+A ++ + +L
Sbjct: 192 PRDRKLADQVWVEMNGQIMNYIRGKIIEILIVGIGTYFTFFFMELRYSALLAVLVGLSVL 251
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF-- 180
IP A++ + +++ + ++ I + + +
Sbjct: 252 ----IPYIGAAVVTVPIAIVAFFQWGSSPEFFYLMVAYAIIQALDGNVIVPVLFSEAVNL 307
Query: 181 --VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
V I+V L+ +I + + + + + +E+ L
Sbjct: 308 HPVVIIVSVLIFGGLWGFWGVFFAIPLATLVKAVLNAWPNTQAKIENAEEDKL 360
>gi|297538926|ref|YP_003674695.1| hypothetical protein M301_1740 [Methylotenera sp. 301]
gi|297258273|gb|ADI30118.1| protein of unknown function UPF0118 [Methylotenera sp. 301]
Length = 386
Score = 36.3 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 57/189 (30%), Gaps = 8/189 (4%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F +Y+ +S + + + S S T + I S + + T
Sbjct: 195 MAFLAYFLLLSGDTFKRKLVHLTGPSLSRKKITVHILEDINNSIQRYMFMLLITNVMVGL 254
Query: 97 SIFLIKH---FHCIPVYGLIANIL-AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
S++++ + + A L +P VV M + V
Sbjct: 255 SMWVLFRMIGLENAGAWAVFAGFLHVVPYFGPVVTAGATGIAAYMQFGSTSTAVLVAGMT 314
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ +A + V + GRI + + + + L + + I + + I ++
Sbjct: 315 ----MLVATIVGVFLTTWMTGRIAKMNSAAVFISLLFFTWLWGVWGMLLGIPLIVIIKVI 370
Query: 213 FTFPYSFSP 221
P
Sbjct: 371 CVHIEHLQP 379
>gi|317404792|gb|EFV85172.1| hypothetical protein HMPREF0005_04638 [Achromobacter xylosoxidans
C54]
Length = 115
Score = 36.3 bits (82), Expect = 8.5, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F + ++ + P+ ++ W + +++ Q+ ++ +G +
Sbjct: 4 GFWLSFGAVAILLRVAQAPR-----DADAGWRQRCGAALAQATRLQLTVTLGLTPLLAFL 58
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ H + + +AN +AIP ++F+V P L+ LL
Sbjct: 59 V------HQVSLGSPLANAVAIPAVTFLVTPLALLCALL 91
>gi|329924034|ref|ZP_08279297.1| nodulation efficiency protein NfeD [Paenibacillus sp. HGF5]
gi|328940873|gb|EGG37181.1| nodulation efficiency protein NfeD [Paenibacillus sp. HGF5]
Length = 453
Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 51/143 (35%), Gaps = 9/143 (6%)
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVM--AWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+ +F+ P + LL+ + + + V+ +G+ I+ + + G
Sbjct: 242 LATFLTHPGVM--TLLLFIGIAGVIIEVIVPGFGVPGILGVVAFVLYFFGNQVAGFAGWE 299
Query: 179 SFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL---ISEKGNLVA 233
+++ V+ +++ + +G I I + YS S L ++ LVA
Sbjct: 300 TWLLFVIGIVMLAMELFVPSFGILGIIGSASLIAGVVMAAYSTSHVALSLGVAAASALVA 359
Query: 234 LVDKNTLISNYSNPPSFIFSQWK 256
++ + FI S
Sbjct: 360 IIVVALVFKERGVWRKFILSDSL 382
>gi|320533797|ref|ZP_08034392.1| ComEC/Rec2-related protein [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133988|gb|EFW26341.1| ComEC/Rec2-related protein [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 625
Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 56/224 (25%), Gaps = 27/224 (12%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ PA + L P ++ F+ + I
Sbjct: 387 RRAASVPALCAGAIVLLLIDPWQ-----SRNYGFALSVVATAGIVI------------GS 429
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + + A+ LI + + + AN+L+ P
Sbjct: 430 KPVAAHLSHRLPR--WLAAAVALPLVAQAACGPILILLQPSLGAWSVPANLLSEPAAVIA 487
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
I L A++ A ++ +A + T + +
Sbjct: 488 TISGLLAALIAPAWPAAAAVIAWPALAACSWMVWVADFFAHLPGATLPWPEGLTGALALG 547
Query: 185 V---EFLLMVFCKTNIRHI----GSIMIGITIIILFTFPYSFSP 221
LL V +T + G + + + P +P
Sbjct: 548 ACEIGVLLAVAPRTRSALLEGARGLMRPTRGRLAPWQRPEPPAP 591
>gi|251782855|ref|YP_002997158.1| putative competence protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242391485|dbj|BAH81944.1| putative competence protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 747
Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 58/174 (33%), Gaps = 11/174 (6%)
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGV 148
S FL+ +F ++ L + +++P + L L +L +
Sbjct: 360 ITVSLGMLPFLLFYFASFNPMSMVLTELLSYLFDVLILPLLCLVFCLSPLITLSGCNYLF 419
Query: 149 MAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIG 206
+ + + + + G + +V+ F ++ + R I ++
Sbjct: 420 L-----FLEKVIQFLGNTLNASLVFGSPTSWHLLILVISFAILYDHRKIRQRVITCGLVI 474
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVD--KNTLISNYSNPPSFIF-SQWKS 257
++ +P + + +G+ + + D L+ + SF QW+
Sbjct: 475 GLTLLSVKYPLTNEVTFIDIGQGDSILVRDWTGKNLLIDVGGRLSFSSKEQWRQ 528
>gi|94969051|ref|YP_591099.1| hypothetical protein Acid345_2024 [Candidatus Koribacter versatilis
Ellin345]
gi|94551101|gb|ABF41025.1| conserved hypothetical protein [Candidatus Koribacter versatilis
Ellin345]
Length = 526
Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 29/264 (10%), Positives = 76/264 (28%), Gaps = 32/264 (12%)
Query: 41 SYYKGISAIGYFYSIPKMIYSS-ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIF 99
++ Y Y ++ Y + H W + + ++ IGT A +
Sbjct: 38 LVVYAVAGPNYGYFRDELYYLACGEHPAWGYVDQPPMIGWLAWLLQHTIGTSLYALRLLP 97
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
+ H I + G++A L + +A L+ + L M D ++ +
Sbjct: 98 ALAHAGSIFLAGMLARELGGR---RWAMFLAALATLMAPIGLAFGHLFTMNAF-DPLLWV 153
Query: 160 A-----------------HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR---- 198
A + + + ++ ++ +++ +++++
Sbjct: 154 AIAYCVVRIVNTGNQRLWLAVGGLTGITLLNKYGIAFWIVGLIVGVVLTPLRSSLKQKWF 213
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLL-----ISEKGNLVALVDKNTLISNYSNPPSFIFS 253
+G ++ + F + + L + E G V ++ + F
Sbjct: 214 WLGCLLGAAICLPNFLWQWKHHFPFLELMRNVRESGRDV-VLGPLGFLKAQLEMIGFAAG 272
Query: 254 QWKSALITPFHEAPHVQKEDLQEK 277
A + L
Sbjct: 273 ILVIASVIYGFTKAGRSYRTLNCA 296
>gi|149067799|gb|EDM17351.1| TAO kinase 2, isoform CRA_b [Rattus norvegicus]
Length = 1241
Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 27/228 (11%), Positives = 66/228 (28%), Gaps = 18/228 (7%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P ++ G V
Sbjct: 1019 HLPPSLFLLLAQGTALGAVLSLSWRRGLMGVPLGLGAAWLLAWPSLALPLAAMAAGGKWV 1078
Query: 233 ---------ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLK 283
+ + +P F Q A+ A + + +++ +
Sbjct: 1079 RQQGPQMRRGISRLWLRVLLRLSPMVFRALQGCGAVGDRGLFALYPKTNKNGFRSRLPVP 1138
Query: 284 EILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQL--SDILITTIRDINTK 341
+ + V + R SC + ++ + + +
Sbjct: 1139 WPRQGNPRTTQHPLALLARVWALCKGWNWRLA-RASHRLASCLPPWAVHILASWGLLKGE 1197
Query: 342 LCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + P ++ G L + P + + A+ PW
Sbjct: 1198 RPSRIPRLLPRSQRRLG-LSASRQLPPGTVAGRRSQTRRALP----PW 1240
>gi|116513921|ref|YP_812827.1| glycosyltransferase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116093236|gb|ABJ58389.1| 4-amino-4-deoxy-L-arabinose transferase related glycosyltransferase
of PMT family [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 953
Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 57/260 (21%), Gaps = 17/260 (6%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKG-ISAIGYFYSIPKMIYSSESHNTWT 69
+ +A L P S F + + +G + + +
Sbjct: 93 YTIGDVFAYLALLFPTSHLV------FAYQLILLLRLYCVGLAFVYFARHFDFKDGVVLI 146
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ + L A + ++ + G A P+ V
Sbjct: 147 GSGVYMVNAYLLYAALAQPMFTTTFILFPLIVVQLERLLQGGS-----AWPLFGVFVWML 201
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
L +L L I + + WGL I V + LL
Sbjct: 202 VSNYYLAFVLGLGAIIYLFLRWGLAYWKKIPFW-----PTIKKLFFASLGAVLLSAGLLL 256
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ + Y P LI + L S
Sbjct: 257 PELLAVVNSTRTGSQFANGLTFYPAYYYLLLPKELIDGDNWKLMFWSALGLASIILPALV 316
Query: 250 FIFSQWKSALITPFHEAPHV 269
++F W+ +
Sbjct: 317 YLFRNWRKYRLVAASLLLGA 336
>gi|116073324|ref|ZP_01470586.1| ComEC/Rec2-related protein [Synechococcus sp. RS9916]
gi|116068629|gb|EAU74381.1| ComEC/Rec2-related protein [Synechococcus sp. RS9916]
Length = 647
Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 60/165 (36%), Gaps = 17/165 (10%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + G + P + + H + ++ + A
Sbjct: 333 IGFQFSAAATA--GLVLTAPGLEARLKPHLPSKAQGLAG---------ALAVPLAAMAWT 381
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS------LDNIPFGVMA 150
HF +P+Y L+AN+LA P+L + + + +A+++++L + + M
Sbjct: 382 LPLQWLHFGAMPLYALVANLLASPLLMALTLLSMGLALVVLLLPGGLVSLIAPLITLPMQ 441
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+++ + IS + P+ V +VV ++ +T
Sbjct: 442 ALAFLLLRVVTAISHWPWAQVLTGRPQWWMVLVVVLTVVSCCTRT 486
>gi|167903415|ref|ZP_02490620.1| hypothetical protein BpseN_14247 [Burkholderia pseudomallei NCTC
13177]
Length = 276
Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 7/155 (4%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
+ + + + F IP+ G +AN AIP + +V P L I+L LD + +
Sbjct: 21 QFAVTIALAPLTVLWFAQIPLAGPLANAFAIPWVGSLVTPIVLAGIVL-PAPLDASAYAL 79
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
+ ++ + + A + P+ + + +
Sbjct: 80 AHALVQALMRLLDATAGAGRTVWMLPAPDGFALAAAAVGVAWALMPRGW------PVRCA 133
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ + + +P L AL
Sbjct: 134 APLAWLPLVAPAPLAPPDGAFRLTALDVGQGSAVL 168
>gi|156743372|ref|YP_001433501.1| ComEC/Rec2-like protein [Roseiflexus castenholzii DSM 13941]
gi|156234700|gb|ABU59483.1| ComEC/Rec2-related protein [Roseiflexus castenholzii DSM 13941]
Length = 494
Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 34/137 (24%), Gaps = 10/137 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F ++ + Y + W
Sbjct: 334 LWDMGFQLSALATAS-LFAYGKGTEALLMRTPLRVGWLD--------WAREALTATLAAQ 384
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
A ++ F + + +AN+ +P++ ++ + + MI L
Sbjct: 385 ILALPLILYAFGNLSLIAPLANVAMLPMVPSAMLFGAIALVGGMIWLPLGQWLALPAYLF 444
Query: 153 LDIIIHIAHRISVAHNE 169
L + A
Sbjct: 445 LAGLTEGARLFGQLPWA 461
>gi|293189680|ref|ZP_06608397.1| putative integral membrane protein [Actinomyces odontolyticus
F0309]
gi|292821418|gb|EFF80360.1| putative integral membrane protein [Actinomyces odontolyticus
F0309]
Length = 507
Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 4/123 (3%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL--D 142
+ + + + ++ +PV+G+ AN+LA P + + AGL+ L+ LS+
Sbjct: 381 MVCVPAFAELATAPIIVSLSGNVPVWGIAANVLAEPAVPVATV-AGLLGALISPLSIRAA 439
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIG 201
+ V +W I A + ++ + V + R
Sbjct: 440 SACAVVASWATAWIAGAARVCASLPGNGVRVPGGSSTILGVYACCGGGWVAWRAWKRWGA 499
Query: 202 SIM 204
I+
Sbjct: 500 PIV 502
>gi|283853126|ref|ZP_06370380.1| ComEC/Rec2-related protein [Desulfovibrio sp. FW1012B]
gi|283571465|gb|EFC19471.1| ComEC/Rec2-related protein [Desulfovibrio sp. FW1012B]
Length = 822
Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 31/230 (13%), Positives = 65/230 (28%), Gaps = 21/230 (9%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
FD ++ IG F P + + S W+ + L
Sbjct: 356 FDARLQLSALAVAGIGLF-WPPFAAFCARSTLKRPWRWVVLGGLGILWTSLCAEAAVMPV 414
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL----SLDNIPFGVMA 150
+F +F+ N +P+L +V P L+ + L+ + A
Sbjct: 415 ICRLFGDLNFN------PWLNAPWLPLLGLLVTPLALVGLALLPVPFLAGCGTALLLAAA 468
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRI-PETSFVTIVVEFL--LMVFCKTNIR---HIGSIM 204
W + ++ + H + P + L L V R + + +
Sbjct: 469 WCCEGLMRCLAFLEANHLLLTRAVLRPSWPEMLGCFGLLAGLAVTLSGRRRPLAALLASL 528
Query: 205 IGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKNTLISNYSNPPSF 250
+T ++ ++++ +G VA+ F
Sbjct: 529 ALLTGPTVWRAVEDAREQVVLTVLDVGQGQAVAVTLPGGRRLLVDAGGLF 578
>gi|167998182|ref|XP_001751797.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696895|gb|EDQ83232.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 827
Score = 36.3 bits (82), Expect = 9.2, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 32/116 (27%), Gaps = 8/116 (6%)
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
++H++ + A + + L+ CK R G+
Sbjct: 3 PSLLFCGSTFTHVLHVSTSSAKALASIPFPLDGWHTLPDLTGGTLMSSCCKFRARRRGAQ 62
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSAL 259
+++ F N VA+ +++ S SF W A
Sbjct: 63 PCVAVWLLMDPFFPLGGFH-------NSVAIQNQDGK-RMSSRGDSFSSLDWDKAN 110
>gi|146318308|ref|YP_001198020.1| membrane metal-binding protein [Streptococcus suis 05ZYH33]
gi|146320502|ref|YP_001200213.1| membrane metal-binding protein [Streptococcus suis 98HAH33]
gi|145689114|gb|ABP89620.1| Predicted membrane metal-binding protein [Streptococcus suis
05ZYH33]
gi|145691308|gb|ABP91813.1| Predicted membrane metal-binding protein [Streptococcus suis
98HAH33]
gi|292558103|gb|ADE31104.1| ComEC/Rec2-related protein: DNA internalization-related competence
protein ComEC/Rec2 [Streptococcus suis GZ1]
Length = 760
Score = 36.3 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 44/128 (34%), Gaps = 15/128 (11%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSI---KQSFLNEIRANIGTYGSASASIFLI 101
++ +P+ + ++ T+T+ + ++ + + A S L+
Sbjct: 325 AVTVFICLLILPRFLLTAGGVLTFTYAFLLTVFDFEDLGQVKKAAVESLSISLGILPVLM 384
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI-----------LSLDNIPFGVMA 150
+F+ ++ + + +++P + LL + ++ I V
Sbjct: 385 TYFYAFQPLSILLTFVFSFVFDVLLLPGLSVIFLLSPVVKMTWVNGFFVFMEKIIVWVAD 444
Query: 151 WGLD-III 157
GL I+
Sbjct: 445 LGLRPWIL 452
>gi|332969197|gb|EGK08228.1| cytochrome c biogenesis protein [Psychrobacter sp. 1501(2011)]
Length = 702
Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 17/186 (9%), Positives = 56/186 (30%), Gaps = 12/186 (6%)
Query: 37 FNFSSYYKGISAIGY-FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
F++ + ++ +IP + ++ + + +F + I +
Sbjct: 368 LAFAAVFVLLALYMLEVINIPVPNAIRQKTHSLSQAGDKYLGSTFGSFIAGLLS--ALVV 425
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ F + I N + + + ++ LM+L + +M +
Sbjct: 426 SPCVSAPLFGALLAVSTIGNPFL--GFAALFMLGFGLSAPLMLLGVSQ--GNLMPKAGEW 481
Query: 156 IIHIAHRISVAHNEFCI-----GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
+ + ++ + + + + F+++ G + +
Sbjct: 482 MNWVKQGFALLLFAVALLLVERVLMSPVMLMLWAMWFMVVAVWAWKWVGRGQLFTKPLAL 541
Query: 211 ILFTFP 216
IL T+
Sbjct: 542 ILATWA 547
>gi|257874947|ref|ZP_05654600.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257809113|gb|EEV37933.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 609
Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 47/127 (37%), Gaps = 19/127 (14%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + + F+ + + N+L ++P +A + + +L + +
Sbjct: 194 AFALIFTSMAVFNYFNIAIRMNNLLVD-----FILPVLTLAGIAGLFALKGNVLPSIGFF 248
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH---IGSIMIGITI 209
L + + + F+ I+ +LL+ + ++R +G +++G+
Sbjct: 249 L-----------LIGASLDLVKNSAVFFLLILGGYLLVCLWQASVRWRQRLGMMIVGLAA 297
Query: 210 IILFTFP 216
I L P
Sbjct: 298 IGLSVLP 304
>gi|121715848|ref|XP_001275533.1| MFS transporter, putative [Aspergillus clavatus NRRL 1]
gi|119403690|gb|EAW14107.1| MFS transporter, putative [Aspergillus clavatus NRRL 1]
Length = 468
Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 4/133 (3%)
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
L+ + + + + F GL+ + L + M G+ + ++ +
Sbjct: 256 LVFDPIVLCMCVFASFVYGLLYLFLTAYPIIFQRIHGMNPGVGGLPYLGVIVGQLLGAVA 315
Query: 172 IGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
I ++M + I G++ + L Y S ++
Sbjct: 316 IAATQPWILRRLEETGGVMMPEWRLPIAIPGAVAFSAGLFWLGWSGYKQSIHWIVP---T 372
Query: 231 LVALVDKNTLISN 243
L L+ L++
Sbjct: 373 LSGLLTGFGLLTM 385
>gi|157961796|ref|YP_001501830.1| hypothetical protein Spea_1973 [Shewanella pealeana ATCC 700345]
gi|157846796|gb|ABV87295.1| protein of unknown function UPF0118 [Shewanella pealeana ATCC
700345]
Length = 369
Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 16/165 (9%), Positives = 45/165 (27%), Gaps = 9/165 (5%)
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
++ K + + Q N IR I + ++ + L+ + + +L
Sbjct: 193 PTNRDLARKVWNEMHQQIFNYIRGKIIEIVIIGVASYIFFALMDLRYAALLGVLTGLSVL 252
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG-----RIPE 177
IP ++ + ++L + ++ I + +
Sbjct: 253 ----IPYVGATLVTLPIALVAFVQWGFSPEFGYLMVGYGIIQALDGNVLVPLLFSDAVDL 308
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
I + + + ++ +P +PD
Sbjct: 309 HPVFIIAAVLIFGGLWGVWGVFFAIPLASLVKAVINAWPVPNNPD 353
>gi|148652580|ref|YP_001279673.1| hypothetical protein PsycPRwf_0771 [Psychrobacter sp. PRwf-1]
gi|148571664|gb|ABQ93723.1| conserved hypothetical protein [Psychrobacter sp. PRwf-1]
Length = 344
Score = 36.3 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 23/142 (16%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVY---GLIANILAIPILSFVVI----PAGLIAILLM 137
+ + + HF + Y G+IA ++ +L+ +++ P L+ ++L
Sbjct: 33 LSMQEVSATKKRMLIATYHFGRLLSYAFLGVIAGLIGTTVLAPLMMGNNLPRILLGLVLA 92
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTN 196
+ L+ + + + + I + P T+F + L
Sbjct: 93 FIGLNMLGLPFLNK----LEKVGMGIWKKLSPLRQKVFPLTTFPRALAAGLLW------- 141
Query: 197 IRHIGSIMIGITIIILFTFPYS 218
G + G+ L
Sbjct: 142 ----GFLPCGLVYGALLMAAVG 159
>gi|289577772|ref|YP_003476399.1| hypothetical protein Thit_0536 [Thermoanaerobacter italicus Ab9]
gi|289527485|gb|ADD01837.1| membrane protein-like protein [Thermoanaerobacter italicus Ab9]
Length = 194
Score = 36.3 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 17/146 (11%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGIS--AIGYFYSIPKMIYSSESHNTWTWK 71
+ I I P FPG +FS ++ AIG Y + + + H T T
Sbjct: 15 LSAIAFILMYLEFQVPLFPGFLKLDFSDVPALVASFAIGPLYGVMVELIKNILHATVTQS 74
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
+ +G+ +A + F+ LI+ +AI + V + L
Sbjct: 75 ------GAIGEIANFTVGSIFVYTAGVI--YQFNRTRKTALIS--MAIATVVMAVTASLL 124
Query: 132 IAILLMILSLDNIPFGVMAWGLDIII 157
+ + + VM W +D II
Sbjct: 125 NYYVFLP-----LYQRVMGWPMDAII 145
>gi|319901290|ref|YP_004161018.1| transmembrane protein [Bacteroides helcogenes P 36-108]
gi|319416321|gb|ADV43432.1| putative transmembrane protein [Bacteroides helcogenes P 36-108]
Length = 583
Score = 36.3 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 50/167 (29%), Gaps = 28/167 (16%)
Query: 38 NFSSYYKGISAIGYFYSIPKM----IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+F + + G + S + + S + L + +
Sbjct: 43 SFFHSFCTVGGFGGWLSAWGLQSFALPHVGSLIFILPALALGVVMYILLCRKGLAEVFVP 102
Query: 94 ASASIFLIKHFHCIPVY----GLIANILAIPILSFVVIPA------GLIAILLMILSLDN 143
+A F + Y G ++ +LA+ +L++V + L ++L++ +
Sbjct: 103 LTAVPAACLLFSQLDYYYSWQGSVSTLLALSVLAWVDMIGRMKLKIALFSLLILPVF--- 159
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
++ A + V + T+ + ++
Sbjct: 160 -----------WLLGSAVTVYVLSGTVLFFSRKTWPYATLPLLICML 195
>gi|302187294|ref|ZP_07263967.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. syringae
642]
Length = 738
Score = 36.3 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 52/189 (27%), Gaps = 48/189 (25%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
+ P PG F + + + + + S +
Sbjct: 314 VLIFEPLVTLQPG-----FWLSFAAVGILILIF-------------SGRLGAWSWWQSWT 355
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ +G A I + G AN+LA+P +S +V+P L+ LL+ +
Sbjct: 356 RAQWLIAVGLLPILLALNLP------ISLSGPFANLLAVPWVSVIVLPPALLGTLLLQVP 409
Query: 141 -LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET--------------------- 178
+ + L + ++ A + +P
Sbjct: 410 VIGEGLLWLAGGALQWLFVFLGAVAAALPAWLPSAVPVWAWWLSLLGALLLLLPKGVPMR 469
Query: 179 --SFVTIVV 185
+ +++
Sbjct: 470 PLGWPLLLL 478
Score = 35.9 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 79/256 (30%), Gaps = 14/256 (5%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
P + +L P+G P FD+ + I A G + + +
Sbjct: 119 QPVNSGERWRMAIKLKRPAGLVNPDAFDYQAWLLAQRIGATGTVVDGQLLAPARAAWRDA 178
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+++ ++ A + + S + ++L I ++
Sbjct: 179 IRQRLLAVDAQGREGGLAALVLGDGSGLSSTDWQVLQDTGTV----HLLVISGQHIGLLA 234
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIH-IAHRISVAHNEFCIGRIPETSFVTIVVEF 187
+ A++ L L + A S A + V+
Sbjct: 235 GVIYALVA---GLARWGLWP--RFLPWLPWACALAFSAALGYGLLAGFEVPVRRACVMVA 289
Query: 188 LLMVFCKTNIRHIGSIMIGIT---IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+++ + RH+G + + +++F + P +S + ++ + + +
Sbjct: 290 MVL-LWRLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLSFAAVGILILIFSGRLGAW 348
Query: 245 SNPPSFIFSQWKSALI 260
S S+ +QW A+
Sbjct: 349 SWWQSWTRAQWLIAVG 364
>gi|223985178|ref|ZP_03635268.1| hypothetical protein HOLDEFILI_02574 [Holdemania filiformis DSM
12042]
gi|223962849|gb|EEF67271.1| hypothetical protein HOLDEFILI_02574 [Holdemania filiformis DSM
12042]
Length = 586
Score = 36.3 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 66/188 (35%), Gaps = 36/188 (19%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI---------RANIGTYGSASASIFL 100
+F IP ++Y++ +++ + + F R Y +A +F
Sbjct: 90 DFFLIIPALLYNAGLSLARSYQFLLLLCSFFSAWFMGKLTIKLSRQQPAMYLAAFLYVFS 149
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
+ F I V G + +LA F+ +P LI I ++ + +M G ++ ++
Sbjct: 150 LYRFTDIYVRGALGEVLA-----FIFMPVALIGIYEVLWGDEKKWSWLM-TGYSGLL-LS 202
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-------KTNIRHIGSIMIGITIIILF 213
H +S + +++ +++ + I + + I + +
Sbjct: 203 HTLS-------------FYLMVLILLVFILIRWHVLNQQRQRGTAIIKAALWAIGLCSFY 249
Query: 214 TFPYSFSP 221
+P
Sbjct: 250 LWPMLEQM 257
>gi|182412291|ref|YP_001817357.1| ComEC/Rec2-related protein [Opitutus terrae PB90-1]
gi|177839505|gb|ACB73757.1| ComEC/Rec2-related protein [Opitutus terrae PB90-1]
Length = 545
Score = 36.3 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 44/145 (30%), Gaps = 11/145 (7%)
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
TW W + IG S +++ I F L+AN+ IP S
Sbjct: 382 PRATWRWHHRARAAGWHATLTAVAIGIAASLVSAVTGIMFFGLFTPGSLLANLWLIPAAS 441
Query: 124 FVVIPAGLIAILLMILSL------DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
V++ AG ++++ +L N ++ WG+D +
Sbjct: 442 AVIL-AGFVSMVCGVLGFTTGSVLANHAAALLLWGID---AGVEAFVSLPGAWFNASFRP 497
Query: 178 TSFVTIVVEFLLMVFCKTNI-RHIG 201
+ LL R G
Sbjct: 498 PWLGGCALAALLGTMVSGYAGRWAG 522
>gi|295694981|ref|YP_003588219.1| protein of unknown function DUF21 [Bacillus tusciae DSM 2912]
gi|295410583|gb|ADG05075.1| protein of unknown function DUF21 [Bacillus tusciae DSM 2912]
Length = 440
Score = 35.9 bits (81), Expect = 9.9, Method: Composition-based stats.
Identities = 23/186 (12%), Positives = 56/186 (30%), Gaps = 16/186 (8%)
Query: 31 FPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI-- 88
PG + + + +F + + S ++ F + + +
Sbjct: 3 TPGSLFIKILAVFGLVLVNAFFVAAEFALVKVRSTRLQQLAAEGHLRARFAQRVVSKLDA 62
Query: 89 ---GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
T + + + V L+ + A+ LS ++ A+ +++L +I
Sbjct: 63 YLSATQLGITLASLGLGWLGEPAVASLLRPLFALTGLSESIVHTVAFAVAFSLITLLHIV 122
Query: 146 FGVMA---WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
G +A + + A + + + +V LL+ R IG
Sbjct: 123 LGELAPKSLAIRLAEPTALWTA-LPLAYFYKIMYPAIWVLNSFANLLL-------RWIGI 174
Query: 203 IMIGIT 208
+
Sbjct: 175 EPVVSG 180
>gi|260548781|ref|ZP_05823003.1| protein-export membrane protein SecD [Acinetobacter sp. RUH2624]
gi|260407949|gb|EEX01420.1| protein-export membrane protein SecD [Acinetobacter sp. RUH2624]
Length = 633
Score = 35.9 bits (81), Expect = 9.9, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 18/151 (11%)
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ I V+GLIAN + L+ ++ I L + + I +
Sbjct: 473 LSTQIGFLLVAIWMVVFFRVFGLIANFALVFNLAMILTVMSWIGASLTLPGIAGIVITI- 531
Query: 150 AWGLDI-----------IIHIA----HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+D ++ A ++ + I +++ T +V F+L
Sbjct: 532 GMAVDANVLICERIREEMLWGASPKQAIVAGYDRAYNT--IFDSNLTTFLVAFILFAIGT 589
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
I+ ++ + +FT + I
Sbjct: 590 GPIKGFAVTLMIGIVCSMFTAITVTRAIVQI 620
>gi|126464267|ref|YP_001045380.1| gamma-glutamyl phosphate reductase [Rhodobacter sphaeroides ATCC
17029]
gi|166224845|sp|A3PQJ2|PROA_RHOS1 RecName: Full=Gamma-glutamyl phosphate reductase; Short=GPR;
AltName: Full=Glutamate-5-semialdehyde dehydrogenase;
AltName: Full=Glutamyl-gamma-semialdehyde dehydrogenase;
Short=GSA dehydrogenase
gi|126106078|gb|ABN78608.1| glutamate-5-semialdehyde dehydrogenase [Rhodobacter sphaeroides
ATCC 17029]
Length = 420
Score = 35.9 bits (81), Expect = 9.9, Method: Composition-based stats.
Identities = 22/175 (12%), Positives = 45/175 (25%), Gaps = 14/175 (8%)
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWK 256
IR + + + + +I + L + GN V L + + +
Sbjct: 113 IRRVRTPLGVVGVIYESRPNVTADAGALCLKSGNAVILRGGSESFHSSGAIHA-ALQDGL 171
Query: 257 SALITP-------FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSD 309
P E L+ + + + V H
Sbjct: 172 RQAGLPVDAIQRVPTRDRAAVAEMLRMVEHIDVIVPRGGKGLVGLVQAEARVPVFAHLEG 231
Query: 310 VIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCN--VSLLITPEILQKQGSLEI 362
+ + + + ++ + T +C LLI L K G + I
Sbjct: 232 ICHVYADGDADL----EKARRVVLNAKTRRTGICGSAECLLIDRAFLAKHGPVLI 282
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.312 0.123 0.326
Lambda K H
0.267 0.0376 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,810,138,418
Number of Sequences: 14124377
Number of extensions: 100191968
Number of successful extensions: 1312163
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 1810
Number of HSP's successfully gapped in prelim test: 22571
Number of HSP's that attempted gapping in prelim test: 1274229
Number of HSP's gapped (non-prelim): 47934
length of query: 394
length of database: 4,842,793,630
effective HSP length: 141
effective length of query: 253
effective length of database: 2,851,256,473
effective search space: 721367887669
effective search space used: 721367887669
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.0 bits)
S2: 82 (36.3 bits)