HHsearch alignment of GI: 254780359 and MMDB domain: 1snn_A_
>1snn_A (A:) DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=0 Score=531.19 Aligned_cols=201 Identities=31% Similarity=0.554 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCC-------
Q ss_conf 5669999999968982999967789887013348445999999999970899458614689998740364324-------
Q gi|254780359|r 9 ERYIEDVIQSFQKGEMVIVTDADDRENEADLVLAAIHCTSEKMAFIIRHTCGIVCTPMPFHTAHKLKLNPMVL------- 81 (210)
Q Consensus 9 ~~~ie~ai~al~~G~~Viv~D~~dREnEgDlv~~Ae~vt~e~i~fm~~~~~Glic~al~~~~~~~L~Lp~m~~------- 81 (210)
+++|++||++||+|+||||+|+++||||||||++|+++||++|+||++|++|+||+++++++|++|+||+|+.
T Consensus 1 ~~~ie~ai~al~~G~~Viv~D~~~RE~Egdlv~~Ae~~T~e~i~fm~~~a~GliC~a~~~~~a~~L~Lp~m~~~~~~~~~ 80 (227)
T 1snn_A 1 MNNVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDILEFASQ 80 (227)
T ss_dssp -CHHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHHHHHTCCCHHHHHHHHTT
T ss_pred CCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEECCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 96399999999879979998589987651489885659999999999957998774589999987699511230000111
Q ss_pred -----------CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH------HHCCHHHHCCCCCCCEEEECCCCCC
Q ss_conf -----------45665665217887203477789998899999999984------2013243138985001001269824
Q gi|254780359|r 82 -----------ENESVHKTAFTVSVDSKHGITTGISADDRAYTIKNLAN------PHSIADNFVRPGHIFPLISRDGGVL 144 (210)
Q Consensus 82 -----------~n~~~~~taFtvsvd~~~g~tTGISa~DRa~TIr~la~------~~~~~~df~~PGHV~pL~a~~gGvl 144 (210)
.|+..++++|||||||+ +++|||||+|||+|||.|++ ++++|+||++|||||||++++|||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~t~FtvsVd~~-~~~TGISa~DRa~Tir~la~~~~~~~~~~~~~df~~PGHV~pL~a~~gGvl 159 (227)
T 1snn_A 81 KFKVLRELYPNDIPYDEKSSFSITINHR-KTFTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGLVK 159 (227)
T ss_dssp TCHHHHHTCCTTCTTSSSCCEEEEEEET-TCSSSCSHHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEEEEECCTTGGG
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECC-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEECCCEEECCCCC
T ss_conf 2332123445677666774169987046-776897606788899998731122486545344058860135035037734
Q ss_pred CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCC
Q ss_conf 667802677699887699600598885368875059899999999838907779999999984379
Q gi|254780359|r 145 VRPGHTEASVDLCKITGLPPIAVICELVNDDGTIKKGKQVIEFSKKYDLKIISVQDLIAWRKKKEI 210 (210)
Q Consensus 145 ~R~GHTEaavdL~~lAGl~P~~vi~Eil~~~G~~~~~~~~~~fA~~~~lp~i~i~dli~yr~~~ei 210 (210)
+|+||||||||||+||||+|++|||||||++|+||+++++++||++|+||+++|+|||+||+++|+
T Consensus 160 ~R~GhTEasvdL~~lAGl~p~~vi~eil~~~G~~~~~~~~~~fA~~h~l~~isi~dli~yr~~~e~ 225 (227)
T 1snn_A 160 NRQGHTEMTVALAELANLVPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINYYLDKYL 225 (227)
T ss_dssp TCCSHHHHHHHHHHHTTSCSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEEHHHHHHHC-----
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
T ss_conf 666378899999974699744999999679987458899999999849978989999999998761