HHsearch alignment of GI: 254780359 and MMDB domain: 1snn_A_

>1snn_A (A:) DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii}
Probab=100.00  E-value=0  Score=531.19  Aligned_cols=201  Identities=31%  Similarity=0.554  Sum_probs=195.2

Q ss_pred             HHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCC-------
Q ss_conf             5669999999968982999967789887013348445999999999970899458614689998740364324-------
Q gi|254780359|r    9 ERYIEDVIQSFQKGEMVIVTDADDRENEADLVLAAIHCTSEKMAFIIRHTCGIVCTPMPFHTAHKLKLNPMVL-------   81 (210)
Q Consensus         9 ~~~ie~ai~al~~G~~Viv~D~~dREnEgDlv~~Ae~vt~e~i~fm~~~~~Glic~al~~~~~~~L~Lp~m~~-------   81 (210)
                      +++|++||++||+|+||||+|+++||||||||++|+++||++|+||++|++|+||+++++++|++|+||+|+.       
T Consensus         1 ~~~ie~ai~al~~G~~Viv~D~~~RE~Egdlv~~Ae~~T~e~i~fm~~~a~GliC~a~~~~~a~~L~Lp~m~~~~~~~~~   80 (227)
T 1snn_A            1 MNNVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDILEFASQ   80 (227)
T ss_dssp             -CHHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHHHHHTCCCHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEECCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf             96399999999879979998589987651489885659999999999957998774589999987699511230000111


Q ss_pred             -----------CCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH------HHCCHHHHCCCCCCCEEEECCCCCC
Q ss_conf             -----------45665665217887203477789998899999999984------2013243138985001001269824
Q gi|254780359|r   82 -----------ENESVHKTAFTVSVDSKHGITTGISADDRAYTIKNLAN------PHSIADNFVRPGHIFPLISRDGGVL  144 (210)
Q Consensus        82 -----------~n~~~~~taFtvsvd~~~g~tTGISa~DRa~TIr~la~------~~~~~~df~~PGHV~pL~a~~gGvl  144 (210)
                                 .|+..++++|||||||+ +++|||||+|||+|||.|++      ++++|+||++|||||||++++|||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~t~FtvsVd~~-~~~TGISa~DRa~Tir~la~~~~~~~~~~~~~df~~PGHV~pL~a~~gGvl  159 (227)
T 1snn_A           81 KFKVLRELYPNDIPYDEKSSFSITINHR-KTFTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGLVK  159 (227)
T ss_dssp             TCHHHHHTCCTTCTTSSSCCEEEEEEET-TCSSSCSHHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEEEEECCTTGGG
T ss_pred             CCCCCCCCCCCCCCCCCCCCEEEEEECC-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEECCCEEECCCCC
T ss_conf             2332123445677666774169987046-776897606788899998731122486545344058860135035037734


Q ss_pred             CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCC
Q ss_conf             667802677699887699600598885368875059899999999838907779999999984379
Q gi|254780359|r  145 VRPGHTEASVDLCKITGLPPIAVICELVNDDGTIKKGKQVIEFSKKYDLKIISVQDLIAWRKKKEI  210 (210)
Q Consensus       145 ~R~GHTEaavdL~~lAGl~P~~vi~Eil~~~G~~~~~~~~~~fA~~~~lp~i~i~dli~yr~~~ei  210 (210)
                      +|+||||||||||+||||+|++|||||||++|+||+++++++||++|+||+++|+|||+||+++|+
T Consensus       160 ~R~GhTEasvdL~~lAGl~p~~vi~eil~~~G~~~~~~~~~~fA~~h~l~~isi~dli~yr~~~e~  225 (227)
T 1snn_A          160 NRQGHTEMTVALAELANLVPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINYYLDKYL  225 (227)
T ss_dssp             TCCSHHHHHHHHHHHTTSCSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEEHHHHHHHC-----
T ss_pred             CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
T ss_conf             666378899999974699744999999679987458899999999849978989999999998761