HHSEARCH alignment of GI: 254780359 and SCOP domain: d1snna_

Alignment
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=100.00  E-value=0  Score=511.39  Aligned_cols=194  Identities=32%  Similarity=0.570  Sum_probs=184.7

Q ss_pred             HHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCC------
Q ss_conf             66999999996898299996778988701334844599999999997089945861468999874036432445------
Q gi|254780359|r   10 RYIEDVIQSFQKGEMVIVTDADDRENEADLVLAAIHCTSEKMAFIIRHTCGIVCTPMPFHTAHKLKLNPMVLEN------   83 (210)
Q Consensus        10 ~~ie~ai~al~~G~~Viv~D~~dREnEgDlv~~Ae~vt~e~i~fm~~~~~Glic~al~~~~~~~L~Lp~m~~~n------   83 (210)
                      ++|++||++||+|+||||+||++||||||||++|+++||++|+||++|++|+||+|+++++|++|+||+|+..+      
T Consensus         1 d~ie~ai~~lk~G~~Viv~Dd~~REnEgDlv~~Ae~~t~e~i~fm~~~~~Glic~a~~~~~~~~L~Lp~m~~~~~~~~~~   80 (219)
T d1snna_           1 NNVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDILEFASQK   80 (219)
T ss_dssp             CHHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHHHHHTCCCHHHHHHHHTTT
T ss_pred             CCHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCHHHHHHHC
T ss_conf             97899999998799799996899877514898956599999999997289977846889999876994001201211011


Q ss_pred             ------------CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH------HHCCHHHHCCCCCCCEEEECCCCCCC
Q ss_conf             ------------665665217887203477789998899999999984------20132431389850010012698246
Q gi|254780359|r   84 ------------ESVHKTAFTVSVDSKHGITTGISADDRAYTIKNLAN------PHSIADNFVRPGHIFPLISRDGGVLV  145 (210)
Q Consensus        84 ------------~~~~~taFtvsvd~~~g~tTGISa~DRa~TIr~la~------~~~~~~df~~PGHV~pL~a~~gGvl~  145 (210)
                                  ...++|+|||||||+++ +|||||.|||+|||.|++      ++++++||++|||||||++++|||++
T Consensus        81 ~~~~~~~~~~~~~~~~~t~ftvsvd~~~~-~TGISa~DRa~Tir~La~~~~~~~~~~~~~dF~~PGHV~pL~a~~GGvl~  159 (219)
T d1snna_          81 FKVLRELYPNDIPYDEKSSFSITINHRKT-FTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGLVKN  159 (219)
T ss_dssp             CHHHHHTCCTTCTTSSSCCEEEEEEETTC-SSSCSHHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEEEEECCTTGGGT
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCC
T ss_conf             44211233456765677534998614677-78986777999999997203324754334550588601013550476457


Q ss_pred             CCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHH
Q ss_conf             67802677699887699600598885368875059899999999838907779999999
Q gi|254780359|r  146 RPGHTEASVDLCKITGLPPIAVICELVNDDGTIKKGKQVIEFSKKYDLKIISVQDLIAW  204 (210)
Q Consensus       146 R~GHTEaavdL~~lAGl~P~~vi~Eil~~~G~~~~~~~~~~fA~~~~lp~i~i~dli~y  204 (210)
                      |+|||||+||||+|||++|++||||||+++|+||+.+++++||++|+||+++|+|||+|
T Consensus       160 R~GHTEaavdL~~lAGl~P~aVicEil~ddG~~~~~~~~~~fA~~~~l~~isi~dli~y  218 (219)
T d1snna_         160 RQGHTEMTVALAELANLVPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINY  218 (219)
T ss_dssp             CCSHHHHHHHHHHHTTSCSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEEHHHHHHH
T ss_pred             CCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHH
T ss_conf             78658999999997399864999999669987558899999999849979989998835


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: YrdC/RibB
superfamily: YrdC/RibB
family: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
domain: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
species: Archaeon Methanocaldococcus jannaschii [TaxId: 2190]