Query gi|254780359|ref|YP_003064772.1| GTP cyclohydrolase II protein (riboflavin biosynthesis) [Candidatus Liberibacter asiaticus str. psy62] Match_columns 210 No_of_seqs 114 out of 1786 Neff 5.2 Searched_HMMs 13730 Date Wed Jun 1 03:17:39 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780359.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1g57a_ d.115.1.2 (A:) 3,4-dih 100.0 0 0 538.0 21.0 207 3-209 3-209 (209) 2 d1tksa_ d.115.1.2 (A:) 3,4-dih 100.0 0 0 528.4 19.8 199 9-207 3-202 (202) 3 d1k4ia_ d.115.1.2 (A:) 3,4-dih 100.0 0 0 525.5 18.8 201 9-209 1-213 (216) 4 d1snna_ d.115.1.2 (A:) 3,4-dih 100.0 0 0 511.4 21.5 194 10-204 1-218 (219) 5 d1lh0a_ c.61.1.1 (A:) Orotate 77.8 2.3 0.00017 20.6 7.6 76 129-208 116-194 (213) 6 d1y0na_ d.291.1.1 (A:) Hypothe 72.8 3.1 0.00023 19.8 5.1 39 5-47 34-72 (78) 7 d1ko7a1 c.98.2.1 (A:1-129) HPr 70.8 1.9 0.00014 21.1 3.5 70 125-199 42-111 (129) 8 d1zyma2 c.8.1.2 (A:3-21,A:145- 39.3 6 0.00043 18.0 1.6 80 21-101 11-101 (124) 9 d1hrua_ d.115.1.1 (A:) Hypothe 36.9 13 0.00094 15.9 4.2 63 7-75 3-70 (186) 10 d1tifa_ d.15.8.1 (A:) Translat 36.1 10 0.00076 16.5 2.4 29 171-199 16-47 (76) 11 d1vbga2 c.8.1.1 (A:383-517) Py 36.1 10 0.00076 16.5 2.4 60 40-100 46-124 (135) 12 d1o57a2 c.61.1.1 (A:75-276) Pu 34.5 14 0.001 15.7 5.0 91 65-171 69-159 (202) 13 d1j20a1 c.26.2.1 (A:1-165) Arg 33.6 10 0.00074 16.6 2.0 16 180-195 149-164 (165) 14 d1vl2a1 c.26.2.1 (A:2-169) Arg 33.0 7 0.00051 17.6 1.1 16 180-195 153-168 (168) 15 d1z7da1 c.67.1.4 (A:7-410) Orn 26.4 19 0.0014 14.9 4.1 37 161-197 184-225 (404) 16 d1f0ya2 c.2.1.6 (A:12-203) Sho 24.2 21 0.0016 14.6 3.8 54 114-167 130-188 (192) 17 d1im4a_ e.8.1.7 (A:) DinB homo 23.3 22 0.0016 14.5 2.5 63 9-74 16-88 (209) 18 d1wdka3 c.2.1.6 (A:311-496) Fa 22.6 23 0.0017 14.4 3.4 54 114-167 124-182 (186) 19 d1k92a1 c.26.2.1 (A:1-188) Arg 22.0 22 0.0016 14.5 2.0 17 179-195 166-182 (188) 20 d1lj8a4 c.2.1.6 (A:1-286) Mann 20.6 25 0.0018 14.1 3.0 46 156-208 175-221 (286) 21 d1knxa1 c.98.2.1 (A:1-132) HPr 20.5 22 0.0016 14.5 1.8 64 129-197 49-112 (132) No 1 >d1g57a_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Escherichia coli [TaxId: 562]} Probab=100.00 E-value=0 Score=538.01 Aligned_cols=207 Identities=39% Similarity=0.686 Sum_probs=202.5 Q ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCC Q ss_conf 77577956699999999689829999677898870133484459999999999708994586146899987403643244 Q gi|254780359|r 3 QKKSLDERYIEDVIQSFQKGEMVIVTDADDRENEADLVLAAIHCTSEKMAFIIRHTCGIVCTPMPFHTAHKLKLNPMVLE 82 (210) Q Consensus 3 ~~~~~~~~~ie~ai~al~~G~~Viv~D~~dREnEgDlv~~Ae~vt~e~i~fm~~~~~Glic~al~~~~~~~L~Lp~m~~~ 82 (210) ......|++|++||++||+|+||||+||++||||||||++|+++||++|+||++|++|+||+|+++++|++|+||+|+.. T Consensus 3 ~~~~~~~~~ie~ai~alk~G~~Viv~Dd~~RE~EgDlv~~Ae~~t~e~i~fm~~~~~GliC~a~~~~~~~~L~Lp~m~~~ 82 (209) T d1g57a_ 3 SSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN 82 (209) T ss_dssp GGGCCHHHHHHHHHHHHHTTCCEEEEC----CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEECCCHHHHHCCCCCCCCCC T ss_conf 32178520499999999879979999789988742689897989999999999838998787356999850799986665 Q ss_pred CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC Q ss_conf 56656652178872034777899988999999999842013243138985001001269824667802677699887699 Q gi|254780359|r 83 NESVHKTAFTVSVDSKHGITTGISADDRAYTIKNLANPHSIADNFVRPGHIFPLISRDGGVLVRPGHTEASVDLCKITGL 162 (210) Q Consensus 83 n~~~~~taFtvsvd~~~g~tTGISa~DRa~TIr~la~~~~~~~df~~PGHV~pL~a~~gGvl~R~GHTEaavdL~~lAGl 162 (210) |.+.++++|++|||+++|++|||||.|||+|||.|++++++|+||++|||||||++++|||++|+|||||+||||+|||+ T Consensus 83 ~~~~~~~~ftvsvd~~~g~tTGISa~dRa~Tir~l~~~~~~~~df~~PGHv~pL~a~~gGv~~R~GHTEaavdL~~lAGl 162 (209) T d1g57a_ 83 NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGF 162 (209) T ss_dssp CCCTTCCCBBSCEEESSSCSSSCSHHHHHHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTS T ss_pred CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCEECEEEECCCCCCCCCHHHHHHHHHHHHCCC T ss_conf 54446876158998068854662699999999875233799889527730022654168845663088999999986599 Q ss_pred CCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCC Q ss_conf 60059888536887505989999999983890777999999998437 Q gi|254780359|r 163 PPIAVICELVNDDGTIKKGKQVIEFSKKYDLKIISVQDLIAWRKKKE 209 (210) Q Consensus 163 ~P~~vi~Eil~~~G~~~~~~~~~~fA~~~~lp~i~i~dli~yr~~~e 209 (210) +|++||||||+++|+||+.+++++||++|+||+++|+|||+||+++| T Consensus 163 ~P~avi~Eil~~dG~~~~~~~~~~fA~~~~l~~isi~dli~yr~~~e 209 (209) T d1g57a_ 163 KPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHE 209 (209) T ss_dssp CSCEEEEEBBCTTSSBCCHHHHHHHHHHTTCEEEEHHHHHHHHHHHC T ss_pred CCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHCC T ss_conf 97078999855998646889999999984997998999999998549 No 2 >d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]} Probab=100.00 E-value=0 Score=528.43 Aligned_cols=199 Identities=45% Similarity=0.755 Sum_probs=196.1 Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCCCCCCC Q ss_conf 56699999999689829999677898870133484459999999999708994586146899987403643244566566 Q gi|254780359|r 9 ERYIEDVIQSFQKGEMVIVTDADDRENEADLVLAAIHCTSEKMAFIIRHTCGIVCTPMPFHTAHKLKLNPMVLENESVHK 88 (210) Q Consensus 9 ~~~ie~ai~al~~G~~Viv~D~~dREnEgDlv~~Ae~vt~e~i~fm~~~~~Glic~al~~~~~~~L~Lp~m~~~n~~~~~ 88 (210) |++||+||++||+|+||||+||++||||||||++||++||++|+||++|++|+||+|+++++|++|+||+|+..|.+.++ T Consensus 3 ~~~ie~ai~~l~~G~~Viv~Dd~~RE~EgDlv~~Ae~~T~~~i~fm~~~~~Glic~a~~~~~~~~L~L~~m~~~~~~~~~ 82 (202) T d1tksa_ 3 FTPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLANRSDRHG 82 (202) T ss_dssp SCCHHHHHHHHHTTCCEEEESSSCTTCBCEEEEEGGGCCHHHHHHHHHTBCSCCEEEEEHHHHHHTTCCBSCC------C T ss_pred CCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCCCCCCC T ss_conf 66599999999889979999689988640689797989999999999847887588347899744235654333567777 Q ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEE Q ss_conf 52178872034777899988999999999842013243138985001001269824667802677699887699600598 Q gi|254780359|r 89 TAFTVSVDSKHGITTGISADDRAYTIKNLANPHSIADNFVRPGHIFPLISRDGGVLVRPGHTEASVDLCKITGLPPIAVI 168 (210) Q Consensus 89 taFtvsvd~~~g~tTGISa~DRa~TIr~la~~~~~~~df~~PGHV~pL~a~~gGvl~R~GHTEaavdL~~lAGl~P~~vi 168 (210) ++|++|||+++|++|||||.|||+|||+|++++++|+||++|||||||++++|||++|+|||||+||||+||||+|++|| T Consensus 83 t~f~vsvd~~~g~~TGISa~DRa~Tir~la~~~~~~~df~~PGHv~pl~a~~ggvl~R~GHTEasvdL~~lAGl~P~avi 162 (202) T d1tksa_ 83 TAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPAGVI 162 (202) T ss_dssp CCBBCCEEESTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEEECTTGGGTCCCHHHHHHHHHHHTTSCSBEEE T ss_pred CCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEE T ss_conf 65034442136875565589999999997088998788504434110365047725676389999999983699861899 Q ss_pred EEEEC-CCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHH Q ss_conf 88536-8875059899999999838907779999999984 Q gi|254780359|r 169 CELVN-DDGTIKKGKQVIEFSKKYDLKIISVQDLIAWRKK 207 (210) Q Consensus 169 ~Eil~-~~G~~~~~~~~~~fA~~~~lp~i~i~dli~yr~~ 207 (210) ||||+ ++|+|++.+++++||++|+||+++|+|||+||+| T Consensus 163 ~Eil~d~dG~~~~~~~~~~fA~~~~l~~isi~dli~yr~k 202 (202) T d1tksa_ 163 CELVRDEDGLMMRLDDCIQFGKKHGIKIININQLVEYISK 202 (202) T ss_dssp EEBBCTTTCCBCBHHHHHHHHHHHTCCEEEHHHHHHHHCC T ss_pred EEEEECCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHC T ss_conf 9998879987348999999999859979989999999849 No 3 >d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Magnaporthe grisea [TaxId: 148305]} Probab=100.00 E-value=0 Score=525.53 Aligned_cols=201 Identities=46% Similarity=0.785 Sum_probs=195.1 Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCCCCCCC Q ss_conf 56699999999689829999677898870133484459999999999708994586146899987403643244566566 Q gi|254780359|r 9 ERYIEDVIQSFQKGEMVIVTDADDRENEADLVLAAIHCTSEKMAFIIRHTCGIVCTPMPFHTAHKLKLNPMVLENESVHK 88 (210) Q Consensus 9 ~~~ie~ai~al~~G~~Viv~D~~dREnEgDlv~~Ae~vt~e~i~fm~~~~~Glic~al~~~~~~~L~Lp~m~~~n~~~~~ 88 (210) |++||+||++||+|+||||+||+|||||||||++||++||++|+||++|++|+||+|+++++|++|+||+|+..|.+.++ T Consensus 1 f~~ie~ai~~l~~G~~viv~Dd~~REnEgDlv~~Ae~~t~e~i~fm~~~~~Glic~a~~~~~~~~L~Lp~m~~~~~~~~~ 80 (216) T d1k4ia_ 1 FDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTHNADPRG 80 (216) T ss_dssp CCCHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSSCCCSSC T ss_pred CCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCC T ss_conf 97689999999889969999679988740589786869999999999847998898541765300265543445433333 Q ss_pred CCEEEEEECCC-CCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEE Q ss_conf 52178872034-77789998899999999984201324313898500100126982466780267769988769960059 Q gi|254780359|r 89 TAFTVSVDSKH-GITTGISADDRAYTIKNLANPHSIADNFVRPGHIFPLISRDGGVLVRPGHTEASVDLCKITGLPPIAV 167 (210) Q Consensus 89 taFtvsvd~~~-g~tTGISa~DRa~TIr~la~~~~~~~df~~PGHV~pL~a~~gGvl~R~GHTEaavdL~~lAGl~P~~v 167 (210) ++|+++|+.++ +++|||||.|||+|||+|++++++|+||++|||||||++++|||++|+|||||+||||+|||++|++| T Consensus 81 ~~~~~sv~~~~~~~~TGISa~DRa~Tir~la~~~~~~~df~~PGHv~pL~a~~gGvl~R~GHTEaavdL~~lAGl~P~av 160 (216) T d1k4ia_ 81 TAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAV 160 (216) T ss_dssp CCBBCCEEECSTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTHHHHCCSHHHHHHHHHHHTTCCSBEE T ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEE T ss_conf 54321145405666655217999999999856788821243142030256405880677870799999999819997579 Q ss_pred EEEEECCCC-----------CCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCC Q ss_conf 888536887-----------505989999999983890777999999998437 Q gi|254780359|r 168 ICELVNDDG-----------TIKKGKQVIEFSKKYDLKIISVQDLIAWRKKKE 209 (210) Q Consensus 168 i~Eil~~~G-----------~~~~~~~~~~fA~~~~lp~i~i~dli~yr~~~e 209 (210) ||||||++| .||+++++++||++|+||+++|+|||+||+++| T Consensus 161 i~Eildd~g~~~~~~~~~~g~ma~~~~l~~fA~~h~l~~i~i~dli~yr~~~E 213 (216) T d1k4ia_ 161 ISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTE 213 (216) T ss_dssp EEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEEHHHHHHHHHHHH T ss_pred EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHC T ss_conf 99995189854542233541113519999999982996988999999998631 No 4 >d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Probab=100.00 E-value=0 Score=511.39 Aligned_cols=194 Identities=32% Similarity=0.570 Sum_probs=184.7 Q ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCCCCCC------ Q ss_conf 66999999996898299996778988701334844599999999997089945861468999874036432445------ Q gi|254780359|r 10 RYIEDVIQSFQKGEMVIVTDADDRENEADLVLAAIHCTSEKMAFIIRHTCGIVCTPMPFHTAHKLKLNPMVLEN------ 83 (210) Q Consensus 10 ~~ie~ai~al~~G~~Viv~D~~dREnEgDlv~~Ae~vt~e~i~fm~~~~~Glic~al~~~~~~~L~Lp~m~~~n------ 83 (210) ++|++||++||+|+||||+||++||||||||++|+++||++|+||++|++|+||+|+++++|++|+||+|+..+ T Consensus 1 d~ie~ai~~lk~G~~Viv~Dd~~REnEgDlv~~Ae~~t~e~i~fm~~~~~Glic~a~~~~~~~~L~Lp~m~~~~~~~~~~ 80 (219) T d1snna_ 1 NNVEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDILEFASQK 80 (219) T ss_dssp CHHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHHHHHTCCCHHHHHHHHTTT T ss_pred CCHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCHHHHHHHC T ss_conf 97899999998799799996899877514898956599999999997289977846889999876994001201211011 Q ss_pred ------------CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH------HHCCHHHHCCCCCCCEEEECCCCCCC Q ss_conf ------------665665217887203477789998899999999984------20132431389850010012698246 Q gi|254780359|r 84 ------------ESVHKTAFTVSVDSKHGITTGISADDRAYTIKNLAN------PHSIADNFVRPGHIFPLISRDGGVLV 145 (210) Q Consensus 84 ------------~~~~~taFtvsvd~~~g~tTGISa~DRa~TIr~la~------~~~~~~df~~PGHV~pL~a~~gGvl~ 145 (210) ...++|+|||||||+++ +|||||.|||+|||.|++ ++++++||++|||||||++++|||++ T Consensus 81 ~~~~~~~~~~~~~~~~~t~ftvsvd~~~~-~TGISa~DRa~Tir~La~~~~~~~~~~~~~dF~~PGHV~pL~a~~GGvl~ 159 (219) T d1snna_ 81 FKVLRELYPNDIPYDEKSSFSITINHRKT-FTGITDNDRAFTIKKLAELVKEGRFNDFGKEFRSPGSVTLLRAAEGLVKN 159 (219) T ss_dssp CHHHHHTCCTTCTTSSSCCEEEEEEETTC-SSSCSHHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEEEEECCTTGGGT T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCC T ss_conf 44211233456765677534998614677-78986777999999997203324754334550588601013550476457 Q ss_pred CCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHH Q ss_conf 67802677699887699600598885368875059899999999838907779999999 Q gi|254780359|r 146 RPGHTEASVDLCKITGLPPIAVICELVNDDGTIKKGKQVIEFSKKYDLKIISVQDLIAW 204 (210) Q Consensus 146 R~GHTEaavdL~~lAGl~P~~vi~Eil~~~G~~~~~~~~~~fA~~~~lp~i~i~dli~y 204 (210) |+|||||+||||+|||++|++||||||+++|+||+.+++++||++|+||+++|+|||+| T Consensus 160 R~GHTEaavdL~~lAGl~P~aVicEil~ddG~~~~~~~~~~fA~~~~l~~isi~dli~y 218 (219) T d1snna_ 160 RQGHTEMTVALAELANLVPITTICEMMGDDGNAMSKNETKRYAEKHNLIYLSGEEIINY 218 (219) T ss_dssp CCSHHHHHHHHHHHTTSCSEEEEEEEBCTTSSBCCHHHHHHHHHHHTCCEEEHHHHHHH T ss_pred CCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHH T ss_conf 78658999999997399864999999669987558899999999849979989998835 No 5 >d1lh0a_ c.61.1.1 (A:) Orotate PRTase {Salmonella typhimurium [TaxId: 90371]} Probab=77.81 E-value=2.3 Score=20.63 Aligned_cols=76 Identities=22% Similarity=0.373 Sum_probs=56.6 Q ss_pred CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEE---HHHHHHHH Q ss_conf 898500100126982466780267769988769960059888536887505989999999983890777---99999999 Q gi|254780359|r 129 RPGHIFPLISRDGGVLVRPGHTEASVDLCKITGLPPIAVICELVNDDGTIKKGKQVIEFSKKYDLKIIS---VQDLIAWR 205 (210) Q Consensus 129 ~PGHV~pL~a~~gGvl~R~GHTEaavdL~~lAGl~P~~vi~Eil~~~G~~~~~~~~~~fA~~~~lp~i~---i~dli~yr 205 (210) .+|+| |+-.+ |...-|-.--+++..+-+|..+++|+|=+=-++|.-.......++.+++|+|+++ ++||++|. T Consensus 116 ~~~~V--liVeD--ViTTGgS~~eaie~l~~~G~~V~~v~vivDR~e~~~~~~~~~~~~~~~~gi~~~sl~~~~dl~~~l 191 (213) T d1lh0a_ 116 LQGRV--MLVDD--VITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERDYGCKVISIITLKDLIAYL 191 (213) T ss_dssp CCSEE--EEECS--CCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHHHCCEEEEEEEHHHHHHHH T ss_pred CCCCE--EEECC--CHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHH T ss_conf 77758--99704--210040579999999974033405999985044553036779999997598089981099999999 Q ss_pred HHC Q ss_conf 843 Q gi|254780359|r 206 KKK 208 (210) Q Consensus 206 ~~~ 208 (210) ..+ T Consensus 192 ~~~ 194 (213) T d1lh0a_ 192 EEK 194 (213) T ss_dssp HHC T ss_pred HHC T ss_conf 876 No 6 >d1y0na_ d.291.1.1 (A:) Hypothetical UPF0270 protein PA3463 {Pseudomonas aeruginosa [TaxId: 287]} Probab=72.83 E-value=3.1 Score=19.82 Aligned_cols=39 Identities=18% Similarity=0.334 Sum_probs=28.4 Q ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCC Q ss_conf 5779566999999996898299996778988701334844599 Q gi|254780359|r 5 KSLDERYIEDVIQSFQKGEMVIVTDADDRENEADLVLAAIHCT 47 (210) Q Consensus 5 ~~~~~~~ie~ai~al~~G~~Viv~D~~dREnEgDlv~~Ae~vt 47 (210) .++ ...|+++..+|++|+.+|+||.+. |.-=+++.+-+. T Consensus 34 ~sl-~~kv~qv~~qL~~G~~vI~fde~~---Es~~I~~k~~l~ 72 (78) T d1y0na_ 34 TPL-DVRVERARHALRRGEAVILFDPES---QQCQLMLRSEVP 72 (78) T ss_dssp CCH-HHHHHHHHHHHHTTSEEEEECTTT---CCEEEEEGGGSC T ss_pred CCH-HHHHHHHHHHHHCCCEEEEECCCC---CEEEEEEHHHHH T ss_conf 259-999999999998699899987988---747406499968 No 7 >d1ko7a1 c.98.2.1 (A:1-129) HPr kinase/phoshatase HprK N-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Probab=70.79 E-value=1.9 Score=21.14 Aligned_cols=70 Identities=14% Similarity=0.096 Sum_probs=45.5 Q ss_pred HHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEHH Q ss_conf 431389850010012698246678026776998876996005988853688750598999999998389077799 Q gi|254780359|r 125 DNFVRPGHIFPLISRDGGVLVRPGHTEASVDLCKITGLPPIAVICELVNDDGTIKKGKQVIEFSKKYDLKIISVQ 199 (210) Q Consensus 125 ~df~~PGHV~pL~a~~gGvl~R~GHTEaavdL~~lAGl~P~~vi~Eil~~~G~~~~~~~~~~fA~~~~lp~i~i~ 199 (210) -++.+||-+..+-.++-+.+.+--..+..--+.++....++|++.- .| ...-+++.++|+++++|++... T Consensus 42 ~~~~~~~~l~i~G~~e~~yl~~~~~~~~~~~i~~l~~~~~~~lIit----~g-~~~p~~li~~a~~~~iPll~t~ 111 (129) T d1ko7a1 42 FSHYASDRIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVT----RD-LEPPEELIEAAKEHETPLITSK 111 (129) T ss_dssp CTTCCTTSEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEEC----TT-CCCCHHHHHHHHHTTCCEEECC T ss_pred HHHCCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEE----CC-CCCCHHHHHHHHHHCCEEEEEC T ss_conf 9714798599980477888862580789999999817898689997----99-9998999999998098499957 No 8 >d1zyma2 c.8.1.2 (A:3-21,A:145-249) N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system {Escherichia coli [TaxId: 562]} Probab=39.34 E-value=6 Score=18.05 Aligned_cols=80 Identities=16% Similarity=0.202 Sum_probs=48.4 Q ss_pred CCCEEEEEECC-CC--CCCCCEEEEHHHCCHHHHHHH-HHHCCCCEEE-----ECCHHHHHHHHCCCCCCCCCC--CCCC Q ss_conf 89829999677-89--887013348445999999999-9708994586-----146899987403643244566--5665 Q gi|254780359|r 21 KGEMVIVTDAD-DR--ENEADLVLAAIHCTSEKMAFI-IRHTCGIVCT-----PMPFHTAHKLKLNPMVLENES--VHKT 89 (210) Q Consensus 21 ~G~~Viv~D~~-dR--EnEgDlv~~Ae~vt~e~i~fm-~~~~~Glic~-----al~~~~~~~L~Lp~m~~~n~~--~~~t 89 (210) .|+.+++-+.. +. -.++ -|+-++.++|..+..| .....|+|+- .=..-.++.|+||.++.-... .-.. T Consensus 11 ~G~v~~~~~~~~~~~~~~~~-~ILV~~~l~P~~~~~l~~~~v~Giit~~Gg~tSH~AIlAR~lgIP~vvg~~~~~~~i~~ 89 (124) T d1zyma2 11 FGKALLLKEKIIDLSAIQDE-VILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKN 89 (124) T ss_dssp EEEEEECCCCCCCGGGCCSC-EEEECSCCCHHHHHHSCGGGEEEEECSCCCSSSHHHHHHHHHTCCEECCCSCHHHHCCT T ss_pred EEEEEEECCCHHHHHHCCCC-EEEEECCCCHHHHHHHCHHHEEEEEEECCCCCCHHHHHHHHCCCCEEEECCCHHHHHCC T ss_conf 99999978858889858998-79997468778874317224279998369866478999997499879970217887117 Q ss_pred CEEEEEECCCCC Q ss_conf 217887203477 Q gi|254780359|r 90 AFTVSVDSKHGI 101 (210) Q Consensus 90 aFtvsvd~~~g~ 101 (210) .-.+.||...|. T Consensus 90 g~~v~vDg~~G~ 101 (124) T d1zyma2 90 DDYLILDAVNNQ 101 (124) T ss_dssp TCEEEECCSSCC T ss_pred CCEEEEECCCCE T ss_conf 988999899898 No 9 >d1hrua_ d.115.1.1 (A:) Hypothetical protein YrdC {Escherichia coli [TaxId: 562]} Probab=36.91 E-value=13 Score=15.95 Aligned_cols=63 Identities=8% Similarity=0.115 Sum_probs=37.5 Q ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHH-----CCCCEEEECCHHHHHHHH Q ss_conf 795669999999968982999967789887013348445999999999970-----899458614689998740 Q gi|254780359|r 7 LDERYIEDVIQSFQKGEMVIVTDADDRENEADLVLAAIHCTSEKMAFIIRH-----TCGIVCTPMPFHTAHKLK 75 (210) Q Consensus 7 ~~~~~ie~ai~al~~G~~Viv~D~~dREnEgDlv~~Ae~vt~e~i~fm~~~-----~~Glic~al~~~~~~~L~ 75 (210) ++.+.|++|++.|++|+.|++=-| +-..+.+..-+++.+..+.+- ...+..++-+.+...++- T Consensus 3 ~~~d~i~~a~~~L~~G~iv~~PTd------t~Ygl~~~~~~~~av~~i~~~K~R~~~kp~~vlv~~~~~~~~~~ 70 (186) T d1hrua_ 3 LQRDAIAAAIDVLNEERVIAYPTE------AVFGVGCDPDSETAVMRLLELKQRPVDKGLILIAANYEQLKPYI 70 (186) T ss_dssp HHHHHHHHHHHHHHTTCCEEEECS------SSEEEEECTTCHHHHHHHHHHHTCCGGGCCEEEESSHHHHGGGC T ss_pred CCHHHHHHHHHHHHCCCEEEEECC------CEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHC T ss_conf 787999999999976998999878------63178895899689999998630011332002320566533330 No 10 >d1tifa_ d.15.8.1 (A:) Translation initiation factor IF3, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Probab=36.09 E-value=10 Score=16.52 Aligned_cols=29 Identities=24% Similarity=0.589 Sum_probs=21.4 Q ss_pred EECCCCC---CCCHHHHHHHHHHHCCCEEEHH Q ss_conf 5368875---0598999999998389077799 Q gi|254780359|r 171 LVNDDGT---IKKGKQVIEFSKKYDLKIISVQ 199 (210) Q Consensus 171 il~~~G~---~~~~~~~~~fA~~~~lp~i~i~ 199 (210) +++++|+ .++..++...|++.||-++.++ T Consensus 16 lI~~~G~~lGv~~~~eAl~~A~~~glDLV~vs 47 (76) T d1tifa_ 16 LIDQNGDQLGIKSKQEALEIAARRNLDLVLVA 47 (76) T ss_dssp EECTTSCEEEEEEHHHHHHHHHHTTCEEEEEE T ss_pred EECCCCCEECEECHHHHHHHHHHCCCCEEEEC T ss_conf 98799969670429999999998199879845 No 11 >d1vbga2 c.8.1.1 (A:383-517) Pyruvate phosphate dikinase, central domain {Maize (Zea mays) [TaxId: 4577]} Probab=36.08 E-value=10 Score=16.54 Aligned_cols=60 Identities=13% Similarity=0.080 Sum_probs=35.6 Q ss_pred EEEHHHCCHHHHHHHHHHCCCCEEE-----ECCHHHHHHHHCCCCCCCCC--------------CCCCCCEEEEEECCCC Q ss_conf 3484459999999999708994586-----14689998740364324456--------------6566521788720347 Q gi|254780359|r 40 VLAAIHCTSEKMAFIIRHTCGIVCT-----PMPFHTAHKLKLNPMVLENE--------------SVHKTAFTVSVDSKHG 100 (210) Q Consensus 40 v~~Ae~vt~e~i~fm~~~~~Glic~-----al~~~~~~~L~Lp~m~~~n~--------------~~~~taFtvsvd~~~g 100 (210) |+-+...+|+.+..|.+ ++|+|.- .=..-.+++|++|-.+.-.. ..-...-.|+||...| T Consensus 46 ILV~~~t~p~~~~~m~~-a~gIVte~GG~tSHaAivARelgiP~VvG~~~~~~~~~~~~~~~~~~~l~~G~~VtvDg~~G 124 (135) T d1vbga2 46 ILVRAETSPEDVGGMHA-AVGILTERGGMTSHAAVVARGWGKCCVSGCSGIRVNDAEKLVTIGGHVLREGEWLSLNGSTG 124 (135) T ss_dssp EEEESCCCTTSHHHHHH-SSEEEESSCCTTSHHHHHHHHTTCCEEECCTTEEEEGGGTEEEETTEEEETTCEEEEETTTT T ss_pred EEEECCCCHHHHHHHHH-EEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCHHCCEEEECCEEECCCCEEEEECCCC T ss_conf 89984489788411241-16899834874420877777649856853542011001034675564983998999979986 No 12 >d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal domain {Bacillus subtilis [TaxId: 1423]} Probab=34.55 E-value=14 Score=15.71 Aligned_cols=91 Identities=15% Similarity=0.236 Sum_probs=55.3 Q ss_pred ECCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCC Q ss_conf 14689998740364324456656652178872034777899988999999999842013243138985001001269824 Q gi|254780359|r 65 PMPFHTAHKLKLNPMVLENESVHKTAFTVSVDSKHGITTGISADDRAYTIKNLANPHSIADNFVRPGHIFPLISRDGGVL 144 (210) Q Consensus 65 al~~~~~~~L~Lp~m~~~n~~~~~taFtvsvd~~~g~tTGISa~DRa~TIr~la~~~~~~~df~~PGHV~pL~a~~gGvl 144 (210) ++....+.+|+.|+...+.........+++.+..++.+.++ +.-..+.++..+|-=..++-. ++ T Consensus 69 ~lA~~lA~~L~~p~v~~Rk~~k~~~~~~~~~~~~~~~~~~~-------------~~l~i~~~~l~~g~rVlIVDD---vi 132 (202) T d1o57a2 69 PLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYVSGSSNRI-------------QTMSLAKRSMKTGSNVLIIDD---FM 132 (202) T ss_dssp HHHHHHHHHHTCCEEEEBCC-----CCEEEEEEECSSCCSE-------------EEEEEEGGGSCTTCEEEEEEE---EE T ss_pred HHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEECCCCCCC-------------CCCHHCCCCCCCCCEEEEEHH---HH T ss_conf 45579999863160543025777999769997523777764-------------320102662104965999747---76 Q ss_pred CCCCHHHHHHHHHHHCCCCCEEEEEEE Q ss_conf 667802677699887699600598885 Q gi|254780359|r 145 VRPGHTEASVDLCKITGLPPIAVICEL 171 (210) Q Consensus 145 ~R~GHTEaavdL~~lAGl~P~~vi~Ei 171 (210) ..-|.-++++++.+-+|..++++.|-+ T Consensus 133 ~TG~T~~a~~~~l~~~Ga~vv~~~vlv 159 (202) T d1o57a2 133 KAGGTINGMINLLDEFNANVAGIGVLV 159 (202) T ss_dssp SSSHHHHHHHHHTGGGTCEEEEEEEEE T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEEEE T ss_conf 516899999999998799899999999 No 13 >d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]} Probab=33.57 E-value=10 Score=16.61 Aligned_cols=16 Identities=13% Similarity=0.389 Sum_probs=14.6 Q ss_pred CHHHHHHHHHHHCCCE Q ss_conf 9899999999838907 Q gi|254780359|r 180 KGKQVIEFSKKYDLKI 195 (210) Q Consensus 180 ~~~~~~~fA~~~~lp~ 195 (210) +++|..+||++|+||+ T Consensus 149 ~k~ei~~ya~~~~iPv 164 (165) T d1j20a1 149 GRKEMIAYAEAHGIPV 164 (165) T ss_dssp SHHHHHHHHHHTTCCC T ss_pred CHHHHHHHHHHHCCCC T ss_conf 8999999999928899 No 14 >d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Probab=33.04 E-value=7 Score=17.63 Aligned_cols=16 Identities=13% Similarity=0.331 Sum_probs=13.9 Q ss_pred CHHHHHHHHHHHCCCE Q ss_conf 9899999999838907 Q gi|254780359|r 180 KGKQVIEFSKKYDLKI 195 (210) Q Consensus 180 ~~~~~~~fA~~~~lp~ 195 (210) ++++..+||++||||+ T Consensus 153 sk~ei~~ya~~~~iPi 168 (168) T d1vl2a1 153 GRTDLINYAMEKGIPI 168 (168) T ss_dssp --CHHHHHHHHHTCCC T ss_pred CHHHHHHHHHHCCCCC T ss_conf 9999999999849999 No 15 >d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} Probab=26.45 E-value=19 Score=14.85 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=27.7 Q ss_pred CCCCEEEEEEEEC-CCCCCCC----HHHHHHHHHHHCCCEEE Q ss_conf 9960059888536-8875059----89999999983890777 Q gi|254780359|r 161 GLPPIAVICELVN-DDGTIKK----GKQVIEFSKKYDLKIIS 197 (210) Q Consensus 161 Gl~P~~vi~Eil~-~~G~~~~----~~~~~~fA~~~~lp~i~ 197 (210) .-.-++||+|-+. ..|.... .+++.+++++||+++|- T Consensus 184 ~~~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~ 225 (404) T d1z7da1 184 DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVA 225 (404) T ss_dssp STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEE T ss_pred CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEE T ss_conf 997799999778388897409999999999999881978999 No 16 >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Probab=24.18 E-value=21 Score=14.59 Aligned_cols=54 Identities=24% Similarity=0.365 Sum_probs=43.3 Q ss_pred HHHHHHHHCCHH-----HHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEE Q ss_conf 999984201324-----313898500100126982466780267769988769960059 Q gi|254780359|r 114 IKNLANPHSIAD-----NFVRPGHIFPLISRDGGVLVRPGHTEASVDLCKITGLPPIAV 167 (210) Q Consensus 114 Ir~la~~~~~~~-----df~~PGHV~pL~a~~gGvl~R~GHTEaavdL~~lAGl~P~~v 167 (210) |..++.....|+ .|..|-|..||+---.|-...+-..+.+.++++..|..|+-| T Consensus 130 i~~la~~~~~p~r~ig~HffnP~~~~~lVEIv~g~~T~~~~i~~~~~~~~~lgk~pV~v 188 (192) T d1f0ya2 130 ITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSC 188 (192) T ss_dssp HHHHHTTSSCGGGEEEEEECSSTTTCCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEE T ss_pred CCHHHHHCCCHHHEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEE T ss_conf 20233202587677851122666766679983899989999999999999869979996 No 17 >d1im4a_ e.8.1.7 (A:) DinB homolog (DBH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Probab=23.29 E-value=22 Score=14.48 Aligned_cols=63 Identities=17% Similarity=0.188 Sum_probs=39.4 Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHH----------HHHHHHHHCCCCEEEECCHHHHHHH Q ss_conf 56699999999689829999677898870133484459999----------9999997089945861468999874 Q gi|254780359|r 9 ERYIEDVIQSFQKGEMVIVTDADDRENEADLVLAAIHCTSE----------KMAFIIRHTCGIVCTPMPFHTAHKL 74 (210) Q Consensus 9 ~~~ie~ai~al~~G~~Viv~D~~dREnEgDlv~~Ae~vt~e----------~i~fm~~~~~Glic~al~~~~~~~L 74 (210) |.++|.+.+-.-.|+||+|....++.+..-.|.++ +++ .+.-..+.+-.++.++-..+...+. T Consensus 16 yasvE~~~~p~l~~~Pv~V~~~~~~~~~~g~i~a~---sy~Ar~~GI~~gm~~~~A~~~cP~l~~v~~~~~~Y~~~ 88 (209) T d1im4a_ 16 FAQVEEVLNPQYKGKPLVVCVYSGRTKTSGAVATA---NYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPIYEAF 88 (209) T ss_dssp HHHHHHHHSGGGTTSCEEEEEEC----CCEEEEEE---CHHHHTTTCCTTCBHHHHHHHCTTSEEEECCHHHHHHH T ss_pred HHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEC---CHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH T ss_conf 99999776824479988997168888787599974---99999708886135778986088630367518999999 No 18 >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Probab=22.62 E-value=23 Score=14.40 Aligned_cols=54 Identities=28% Similarity=0.365 Sum_probs=40.1 Q ss_pred HHHHHHHHCCHH-----HHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEE Q ss_conf 999984201324-----313898500100126982466780267769988769960059 Q gi|254780359|r 114 IKNLANPHSIAD-----NFVRPGHIFPLISRDGGVLVRPGHTEASVDLCKITGLPPIAV 167 (210) Q Consensus 114 Ir~la~~~~~~~-----df~~PGHV~pL~a~~gGvl~R~GHTEaavdL~~lAGl~P~~v 167 (210) |..|+.....|+ .|..|-|+.||+---.|-..-+.-.+.+.++++..|..|+-| T Consensus 124 i~~la~~~~~p~r~~g~Hf~nP~~~~~lVEiv~~~~T~~~~~~~~~~~~~~lgk~pv~v 182 (186) T d1wdka3 124 ISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVV 182 (186) T ss_dssp HHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEE T ss_pred HHHHHHHCCCCHHEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEE T ss_conf 78887761574215861012675448769988999999999999999999869989997 No 19 >d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=21.98 E-value=22 Score=14.53 Aligned_cols=17 Identities=12% Similarity=0.139 Sum_probs=14.7 Q ss_pred CCHHHHHHHHHHHCCCE Q ss_conf 59899999999838907 Q gi|254780359|r 179 KKGKQVIEFSKKYDLKI 195 (210) Q Consensus 179 ~~~~~~~~fA~~~~lp~ 195 (210) .+++|+.+||++||+|+ T Consensus 166 ~sk~ei~~ya~~~gi~~ 182 (188) T d1k92a1 166 GGRHEMSEFMIACGFDY 182 (188) T ss_dssp SSHHHHHHHHHHTTCCC T ss_pred CCHHHHHHHHHHCCCCC T ss_conf 99999999999849999 No 20 >d1lj8a4 c.2.1.6 (A:1-286) Mannitol 2-dehydrogenase {Pseudomonas fluorescens [TaxId: 294]} Probab=20.57 E-value=25 Score=14.14 Aligned_cols=46 Identities=20% Similarity=0.576 Sum_probs=33.1 Q ss_pred HHHHCCCCCEEEE-EEEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHC Q ss_conf 9887699600598-8853688750598999999998389077799999999843 Q gi|254780359|r 156 LCKITGLPPIAVI-CELVNDDGTIKKGKQVIEFSKKYDLKIISVQDLIAWRKKK 208 (210) Q Consensus 156 L~~lAGl~P~~vi-~Eil~~~G~~~~~~~~~~fA~~~~lp~i~i~dli~yr~~~ 208 (210) .-+.+|.+|..++ |+.+..+|+.++. .+.+||++.+ .++.+|-.++ T Consensus 175 ~R~~~~~~pitilsCDNl~~NG~~Lk~-~vl~~a~~~d------~~~~~Wi~~~ 221 (286) T d1lj8a4 175 QRRAAGIPAFTVMSCDNLPHNGAVTRK-ALLAFAALHN------AELHDWIKAH 221 (286) T ss_dssp HHHHTTCCCCEEEECSSCTTHHHHHHH-HHHHHHHHHC------HHHHHHHHHH T ss_pred HHHHCCCCCCEEEECHHHHHHHHHHHH-HHHHHHHHCC------HHHHHHHHHC T ss_conf 998549998458744135566999999-9999987549------8888988744 No 21 >d1knxa1 c.98.2.1 (A:1-132) HPr kinase/phoshatase HprK N-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} Probab=20.48 E-value=22 Score=14.49 Aligned_cols=64 Identities=20% Similarity=0.300 Sum_probs=44.4 Q ss_pred CCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEE Q ss_conf 898500100126982466780267769988769960059888536887505989999999983890777 Q gi|254780359|r 129 RPGHIFPLISRDGGVLVRPGHTEASVDLCKITGLPPIAVICELVNDDGTIKKGKQVIEFSKKYDLKIIS 197 (210) Q Consensus 129 ~PGHV~pL~a~~gGvl~R~GHTEaavdL~~lAGl~P~~vi~Eil~~~G~~~~~~~~~~fA~~~~lp~i~ 197 (210) .|+.|..+-..+-..+.+-...+.---+-++....|.++|.- . +...-+++.+.|+++++|++. T Consensus 49 ~~~RIQIlG~~E~~Yl~~l~~e~r~~~l~~l~~~~~PciIvt---~--~~~~p~~l~~~a~~~~vPll~ 112 (132) T d1knxa1 49 QIGSVAILGKREFGFLSQKTLVEQQQILHNLLKLNPPAIILT---K--SFTDPTVLLQVNQTYQVPILK 112 (132) T ss_dssp CCCBCEEECHHHHHHHTTSCHHHHTTTHHHHHTTCCSCEEEE---T--TTCCCHHHHHHGGGTCCCEEE T ss_pred CCCEEEEECHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE---C--CCCCCHHHHHHHHHCCCCEEE T ss_conf 888589987999999996899999999999847699889997---9--799999999999982996898 Done!