HHsearch alignment for GI: 254780360 and conserved domain: COG0382
>COG0382 UbiA 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism].
Probab=100.00 E-value=0 Score=328.97 Aligned_cols=278 Identities=22% Similarity=0.297 Sum_probs=240.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCHHHHHH
Q ss_conf 653799999962689999999999999970898-9989999999999999999998863306612013712107056653
Q gi|254780360|r 5 VFRLNFFIVLLKPRVMSLAIYTAFVGIVLAPGH-ISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMARTASRPIPLG 83 (305)
Q Consensus 5 ~~k~~~y~~L~kp~~~~~~~~~~~~g~~la~~~-~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT~~RPl~~g 83 (305)
T Consensus 10 ~~~~~~l~r~~r~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ag~~iND~~D~eiD~~n~rt~~RPl~sG 89 (289)
T COG0382 10 LKALLKLLRLDRPIFNLLLLLPALLGLLLAASGLPSLKLLLLAFLAFFLARSAGYVINDLADREIDRINPRTKNRPLPSG 89 (289)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99999999712499899999999999999864441799999999999999999999999961763067998667999878
Q ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCC
Q ss_conf 04789899988887766899988634458999999988865444544310266560588887766422110132368856
Q gi|254780360|r 84 QISPWEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIYTIWLKRFTPQNIVIGGIAGAIPPMIGWASVTGDVS 163 (305)
Q Consensus 84 ~is~~~a~~~~~~l~~~~~~~l~~~~n~~~~~l~~~~~~~y~~iYtp~lKR~t~~~~~~~~i~ga~~~l~g~~a~~~~~~ 163 (305)
T Consensus 90 ~vS~~~a~~~~~~~~~~~~~~-a~~l~~~~~~l~~~~~~l-~~~Y-~~~Kr~~~~~~~~lg~~~~~~~~~g~~a~~~~~~ 166 (289)
T COG0382 90 RVSVKEALLLAILLLLLGLAL-ALLLNPLAFLLSLAALVL-ALAY-PFLKRFTFLPQLVLGLAFGLGALAGAAAVGGSLP 166 (289)
T ss_pred CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHH-HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 767999999999999999999-999709999999999999-9999-9852577315999999999999999999758533
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 63211147888899999999986535666641013351243388778997434568989987642102210899999999
Q gi|254780360|r 164 IASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLGFASVTYGIIVFF 243 (305)
Q Consensus 164 ~~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~~~g~~yli~ali 243 (305)
T Consensus 167 ~~~~~l~~~~~l~~~~~~~i~~~~D~e~D~~~G~~s~~~~~G~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (289)
T COG0382 167 LLAWLLLLAAILWTLGYDIIYAIQDIEGDRKAGLKSLPVLFGIKKALALALLLLLASALLVLLGLLAGLLGLIYLLGLLV 246 (289)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999987524319876972033885754489999999999999999999998719999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999504889978999998798999999999999986
Q gi|254780360|r 244 LGYHFTLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVDH 289 (305)
Q Consensus 244 ~~~~~l~~a~~~~~~~~~~~~k~a~klF~~S~~yl~ilfl~liid~ 289 (305)
T Consensus 247 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (289)
T COG0382 247 AALLLLYQILIV----DVRDPPACFALFDVNLLLGLLLFIGLILAV 288 (289)
T ss_pred HHHHHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999997----342214579999983699999999999974