HHsearch alignment for GI: 254780360 and conserved domain: PRK05951
>PRK05951 ubiA prenyltransferase; Reviewed.
Probab=99.92 E-value=1.3e-21 Score=147.27 Aligned_cols=279 Identities=16% Similarity=0.153 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHH-H--CH
Q ss_conf 653799999962689999999999999970---89899899999999999999999988633066120137121-0--70
Q gi|254780360|r 5 VFRLNFFIVLLKPRVMSLAIYTAFVGIVLA---PGHISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMART-A--SR 78 (305)
Q Consensus 5 ~~k~~~y~~L~kp~~~~~~~~~~~~g~~la---~~~~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT-~--~R 78 (305)
T Consensus 1 ~~~~k~~~~a~RP~tl~asi~pv~lG~a~A~~~~g~f~~~~~ll~ll~~~l~q~~~Nl~NDY~D~~~G~D~~~~~~~~~~ 80 (296)
T PRK05951 1 ITRDKEFFIQTRPWSFVMTIISTSFGYSYGFYLIGSFDPLLSWAILLGCVLLHASANVLNDYFDYVLGIDTRETTGYRPH 80 (296)
T ss_pred CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
T ss_conf 95088999996703769999999999999999769875999999999999999999985618888457756766788853
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH--HH-HHCCCCCCHHHHHHH-HHHHH
Q ss_conf 56653047898999888877668999---8863445899999998886544454--43-102665605888877-66422
Q gi|254780360|r 79 PIPLGQISPWEAWVLGVSLAVSSIVI---MGLAINWVSATLLFMSIFCYVVIYT--IW-LKRFTPQNIVIGGIA-GAIPP 151 (305)
Q Consensus 79 Pl~~g~is~~~a~~~~~~l~~~~~~~---l~~~~n~~~~~l~~~~~~~y~~iYt--p~-lKR~t~~~~~~~~i~-ga~~~ 151 (305)
T Consensus 81 ~i~~g~ls~~~v~~~~~~~~~~a~~~G~~L~~~~~~~~l~lg~~g~~~-~~~YTggP~~l~y~-gLGel~v~i~fG~l~v 158 (296)
T PRK05951 81 PIIAGIMSLGNVRVLGIALGCIALQLGGALFLDRRPLAVLLALLGVFL-LYCYMGPPFNLKYR-ALGELLVFIAWGHLMV 158 (296)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCC-CCCHHHHHHHHHHHHH
T ss_conf 688379789999999999999999999999998559999999999999-99981799766566-6107999999899999
Q ss_pred HHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 11013236885663211147888899999999986535666641013351243388778997434568989987642102
Q gi|254780360|r 152 MIGWASVTGDVSIASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLG 231 (305)
Q Consensus 152 l~g~~a~~~~~~~~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~ 231 (305)
T Consensus 159 ~g~~y~qtg~~~~~~~l~s~p~gll~~~IL~~Nn~rD~e~D~~~Gk~Tl~v~lG~~~a~~~~~~l~~~~y~~~~~~~~~~ 238 (296)
T PRK05951 159 LGLIYVWTGNISSPNVLAGVPLGLLVAAVLLANNLRDIEDDERLGAPTLAVIFGRKSAVALYAFALLSPYLILVILVIAI 238 (296)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999991877699999999999999999998786221549976997648786757599999999999999999999986
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 21089999999999999999999995048--8997899999879899999999999998660
Q gi|254780360|r 232 FASVTYGIIVFFLGYHFTLWAWRTFLCKE--DKDIRVTKKLFLESITYLFVLFTILMVDHLI 291 (305)
Q Consensus 232 ~~g~~yli~ali~~~~~l~~a~~~~~~~~--~~~~k~a~klF~~S~~yl~ilfl~liid~~i 291 (305)
T Consensus 239 ~~p~~~ll--~lltlPla~~l~~~~~~~~~~~~~~~T~~l~~~----fg~l~~~g~lls~l~ 294 (296)
T PRK05951 239 LLPLISLW--ALLTLPVAYALCLWQSRKFPHDADPATAQIFMV----FGYLYILGTLLSKLV 294 (296)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_conf 60599999--999999999999999752545553899999999----999999999999872