HHsearch alignment for GI: 254780360 and conserved domain: PRK05951

>PRK05951 ubiA prenyltransferase; Reviewed.
Probab=99.92  E-value=1.3e-21  Score=147.27  Aligned_cols=279  Identities=16%  Similarity=0.153  Sum_probs=184.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHH-H--CH
Q ss_conf             653799999962689999999999999970---89899899999999999999999988633066120137121-0--70
Q gi|254780360|r    5 VFRLNFFIVLLKPRVMSLAIYTAFVGIVLA---PGHISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMART-A--SR   78 (305)
Q Consensus         5 ~~k~~~y~~L~kp~~~~~~~~~~~~g~~la---~~~~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT-~--~R   78 (305)
T Consensus         1 ~~~~k~~~~a~RP~tl~asi~pv~lG~a~A~~~~g~f~~~~~ll~ll~~~l~q~~~Nl~NDY~D~~~G~D~~~~~~~~~~   80 (296)
T PRK05951          1 ITRDKEFFIQTRPWSFVMTIISTSFGYSYGFYLIGSFDPLLSWAILLGCVLLHASANVLNDYFDYVLGIDTRETTGYRPH   80 (296)
T ss_pred             CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
T ss_conf             95088999996703769999999999999999769875999999999999999999985618888457756766788853


Q ss_pred             HHHHHHCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH--HH-HHCCCCCCHHHHHHH-HHHHH
Q ss_conf             56653047898999888877668999---8863445899999998886544454--43-102665605888877-66422
Q gi|254780360|r   79 PIPLGQISPWEAWVLGVSLAVSSIVI---MGLAINWVSATLLFMSIFCYVVIYT--IW-LKRFTPQNIVIGGIA-GAIPP  151 (305)
Q Consensus        79 Pl~~g~is~~~a~~~~~~l~~~~~~~---l~~~~n~~~~~l~~~~~~~y~~iYt--p~-lKR~t~~~~~~~~i~-ga~~~  151 (305)
T Consensus        81 ~i~~g~ls~~~v~~~~~~~~~~a~~~G~~L~~~~~~~~l~lg~~g~~~-~~~YTggP~~l~y~-gLGel~v~i~fG~l~v  158 (296)
T PRK05951         81 PIIAGIMSLGNVRVLGIALGCIALQLGGALFLDRRPLAVLLALLGVFL-LYCYMGPPFNLKYR-ALGELLVFIAWGHLMV  158 (296)
T ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCC-CCCHHHHHHHHHHHHH
T ss_conf             688379789999999999999999999999998559999999999999-99981799766566-6107999999899999


Q ss_pred             HHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             11013236885663211147888899999999986535666641013351243388778997434568989987642102
Q gi|254780360|r  152 MIGWASVTGDVSIASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLG  231 (305)
Q Consensus       152 l~g~~a~~~~~~~~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~  231 (305)
T Consensus       159 ~g~~y~qtg~~~~~~~l~s~p~gll~~~IL~~Nn~rD~e~D~~~Gk~Tl~v~lG~~~a~~~~~~l~~~~y~~~~~~~~~~  238 (296)
T PRK05951        159 LGLIYVWTGNISSPNVLAGVPLGLLVAAVLLANNLRDIEDDERLGAPTLAVIFGRKSAVALYAFALLSPYLILVILVIAI  238 (296)
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999991877699999999999999999998786221549976997648786757599999999999999999999986


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             21089999999999999999999995048--8997899999879899999999999998660
Q gi|254780360|r  232 FASVTYGIIVFFLGYHFTLWAWRTFLCKE--DKDIRVTKKLFLESITYLFVLFTILMVDHLI  291 (305)
Q Consensus       232 ~~g~~yli~ali~~~~~l~~a~~~~~~~~--~~~~k~a~klF~~S~~yl~ilfl~liid~~i  291 (305)
T Consensus       239 ~~p~~~ll--~lltlPla~~l~~~~~~~~~~~~~~~T~~l~~~----fg~l~~~g~lls~l~  294 (296)
T PRK05951        239 LLPLISLW--ALLTLPVAYALCLWQSRKFPHDADPATAQIFMV----FGYLYILGTLLSKLV  294 (296)
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_conf             60599999--999999999999999752545553899999999----999999999999872