HHsearch alignment for GI: 254780360 and conserved domain: PRK12870
>PRK12870 ubiA prenyltransferase; Reviewed.
Probab=100.00 E-value=0 Score=455.16 Aligned_cols=279 Identities=18% Similarity=0.208 Sum_probs=244.0
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCHHHH
Q ss_conf 5379999996---268999999999999997089-899899999999999999999988633066120137121070566
Q gi|254780360|r 6 FRLNFFIVLL---KPRVMSLAIYTAFVGIVLAPG-HISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMARTASRPIP 81 (305)
Q Consensus 6 ~k~~~y~~L~---kp~~~~~~~~~~~~g~~la~~-~~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT~~RPl~ 81 (305)
T Consensus 7 p~w~~y~~L~R~~kP~g~~LL~~p~~~~l~la~~g~p~~~~~~~~~~G~~~~rsagc~iNdi~DrdiD~~v~RT~~RPl~ 86 (289)
T PRK12870 7 PTWLTIIRLLRWDKPAGRLILMIPALWAVFLAARGLPPLPLVGIIILGALATSAAGCVVNDLWDRDIDPHVERTRGRPLA 86 (289)
T ss_pred CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 87899999974467675899999899999997578998999999999999999998699989998145788888887676
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCC
Q ss_conf 53047898999888877668999886344589999999888654445443102665605888877664221101323688
Q gi|254780360|r 82 LGQISPWEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIYTIWLKRFTPQNIVIGGIAGAIPPMIGWASVTGD 161 (305)
Q Consensus 82 ~g~is~~~a~~~~~~l~~~~~~~l~~~~n~~~~~l~~~~~~~y~~iYtp~lKR~t~~~~~~~~i~ga~~~l~g~~a~~~~ 161 (305)
T Consensus 87 ~G~is~~~A~~~~~~l~~~~~~ll-~~ln~~~~~l~~~~~~~-~~iY-p~~KR~t~~pq~~lG~~~~~~~l~gw~av~g~ 163 (289)
T PRK12870 87 SRRLSVKVGIVIALVALLCAAGLA-FFLNPLSFWLCVAAVPV-IFLY-PLAKRVFPVPQLVLAAAWGFAVLISWSAVTGH 163 (289)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHH-HHCCEEEECCCHHHHHHHCCHHHHHHHHHCCC
T ss_conf 777579999999999999999999-99999999999999988-9976-51102267774056754100377899994699
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 56632111478888999999999865356666410133512433887789974345689899876421022108999999
Q gi|254780360|r 162 VSIASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLGFASVTYGIIV 241 (305)
Q Consensus 162 ~~~~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~~~g~~yli~a 241 (305)
T Consensus 164 l~~~~~lL~~~~~~Wt~~~DtiYA~qD~~dD~k~Gv~S~av~~G~~~~~~i~~~~~~~~~~l~~~g~~~~-l~~~y~~~~ 242 (289)
T PRK12870 164 LEVATWLLWGATVFWTLGFDTVYAMSDREDDLRIGINSSAIFFGRYAPEAIGLFFALTVLFLAILGVLLE-LHPPFWLGL 242 (289)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHH
T ss_conf 8768999999999999999899988517539876998775050500699999999999999999999985-319999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999950488997899999879899999999999998660
Q gi|254780360|r 242 FFLGYHFTLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVDHLI 291 (305)
Q Consensus 242 li~~~~~l~~a~~~~~~~~~~~~k~a~klF~~S~~yl~ilfl~liid~~i 291 (305)
T Consensus 243 ~~~~~~~~~q---~~~l~~~~~~~~~~~~F~~N~~~g~llf~gi~~d~ll 289 (289)
T PRK12870 243 ALATVLWARQ---YRRLQAELPPAAYGQLFLQNVWIGFILLAGMILGSLL 289 (289)
T ss_pred HHHHHHHHHH---HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999---9996279986999999998399999999999998749