HHsearch alignment for GI: 254780360 and conserved domain: PRK12871

Probab=100.00  E-value=0  Score=341.89  Aligned_cols=277  Identities=16%  Similarity=0.145  Sum_probs=208.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC-CHH---
Q ss_conf             36537999999626899999999999----999708-989989999999999999999998863306612013-712---
Q gi|254780360|r    4 QVFRLNFFIVLLKPRVMSLAIYTAFV----GIVLAP-GHISVLKSVISIFAIAMGAGASGALNMYYDADIDKM-MAR---   74 (305)
Q Consensus         4 ~~~k~~~y~~L~kp~~~~~~~~~~~~----g~~la~-~~~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~-~~R---   74 (305)
T Consensus         1 m~e~l~ayi~LtR~~--~ll~WP~lw~~~Lal~~a~~g~~~~~~l~if~Lg~vlmrsAGCviNDyaDR~~D~~~ve~~v~   78 (297)
T PRK12871          1 MKETLKAYIDLTRAH--FLPAWPLLFCSGLVLAFANYGGFSWELTIKAALIGLFGFEAGFVLNDYVDRKRDRLDVENTLT   78 (297)
T ss_pred             CHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHCCCHHHCCCCCC
T ss_conf             946899999999883--998889999879999986469997679999999999997057511003431022010244210


Q ss_pred             -----HHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHH
Q ss_conf             -----1070566530478989998888776689998863---4458999999988865444544310266560--58888
Q gi|254780360|r   75 -----TASRPIPLGQISPWEAWVLGVSLAVSSIVIMGLA---INWVSATLLFMSIFCYVVIYTIWLKRFTPQN--IVIGG  144 (305)
Q Consensus        75 -----T~~RPl~~g~is~~~a~~~~~~l~~~~~~~l~~~---~n~~~~~l~~~~~~~y~~iYtp~lKR~t~~~--~~~~~  144 (305)
T Consensus        79 r~~r~~k~RPLpsG~vs~keAl~lf~~L~~~~~~LvL~Lp~~~~~~~~~~~l~A~~l-a~~Y-PfmKR~t~~Pqa~L~g~  156 (297)
T PRK12871         79 RYWRPFKERPIPSGKLSSKNAFALFILLAAVTSALILTLPYPNSLYVFVIMLYSYGI-EAFY-QVKKRNQKYPVAQLLGR  156 (297)
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-HHHH-HHHHCCCCCCHHHHHHH
T ss_conf             025665689799888688999999999999999999983253079999999999999-9998-98853660329999999


Q ss_pred             HHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             77664221101323688566321114788889999999998653566664101335124338877899743456898998
Q gi|254780360|r  145 IAGAIPPMIGWASVTGDVSIASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVG  224 (305)
Q Consensus       145 i~ga~~~l~g~~a~~~~~~~~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~lls  224 (305)
T Consensus       157 ~~f~~~p~a~aa-~~G~~~~~~~Ll~~~~l~WTvAYDT~Yam~DredDlkiGvKStAILFG~k~~~~~i~~~~~l~~~~~  235 (297)
T PRK12871        157 TDFTLFPAAGYL-CYGQPDMTALLYMVFFYPWTMAHLGLNDFIDLENDRARGMKSIAVLYGMKGTMYWVTGFTALHFLAA  235 (297)
T ss_pred             HHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             987578999999-8199878999999999999999999998714215485283032212167633799999999999999


Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             764210221089999999999999999999995048899789999987989999999999999866
Q gi|254780360|r  225 VLPTMLGFASVTYGIIVFFLGYHFTLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVDHL  290 (305)
Q Consensus       225 ll~~~~~~~g~~yli~ali~~~~~l~~a~~~~~~~~~~~~k~a~klF~~S~~yl~ilfl~liid~~  290 (305)
T Consensus       236 l~~~~--~~~~~~l~~~~~g~~ll~~~~~~l~~~~~~---~~~~~a~~~~h~~~~~~~~~~~~~~~  296 (297)
T PRK12871        236 IFFLR--ELGPIALYGFLAGFVLLAGANLYLWKEKSQ---DAGMKILPLYHASLVIYAVSIILDFI  296 (297)
T ss_pred             HHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99997--526376999999999999999999752585---51788888875426777588677520