HHsearch alignment for GI: 254780360 and conserved domain: PRK12877
>PRK12877 consensus.
Probab=100.00 E-value=0 Score=455.20 Aligned_cols=278 Identities=19% Similarity=0.251 Sum_probs=242.6
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHCCCC-CCHH-HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCHHH
Q ss_conf 5379999996---2689999999999999970898-9989-999999999999999998863306612013712107056
Q gi|254780360|r 6 FRLNFFIVLL---KPRVMSLAIYTAFVGIVLAPGH-ISVL-KSVISIFAIAMGAGASGALNMYYDADIDKMMARTASRPI 80 (305)
Q Consensus 6 ~k~~~y~~L~---kp~~~~~~~~~~~~g~~la~~~-~~~~-~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT~~RPl 80 (305)
T Consensus 1 sk~~~y~~L~Rl~kP~g~~Ll~~p~~~g~~lA~~~~~~~~~l~~l~~~G~~l~rsagc~iNd~~D~diD~~v~RT~~RPl 80 (283)
T PRK12877 1 SKFLLYFKLMRLHSPVIYLLVFFPALFGILLASPSLLELLYLLPLFILGSITMRSAGCIINDIFDRKIDKHVARTKNRPL 80 (283)
T ss_pred CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 97279999975366066899999999999981678985599999999999999999989998998603678775778766
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCC
Q ss_conf 65304789899988887766899988634458999999988865444544310266560588887766422110132368
Q gi|254780360|r 81 PLGQISPWEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIYTIWLKRFTPQNIVIGGIAGAIPPMIGWASVTG 160 (305)
Q Consensus 81 ~~g~is~~~a~~~~~~l~~~~~~~l~~~~n~~~~~l~~~~~~~y~~iYtp~lKR~t~~~~~~~~i~ga~~~l~g~~a~~~ 160 (305)
T Consensus 81 ~~G~is~~~A~~~~~~~~~~~~~~l-~~ln~~~~~l~~~~~~~-~~~Y-p~~KR~t~~pq~~lG~~~~~~~l~g~~av~~ 157 (283)
T PRK12877 81 ASGALSVSQALKILFILLIIALVIL-LLTNKTAIYLGIFAMIM-IVLY-PLMKRIFYWPQLFLGFTFNLGVLIGYAMVQN 157 (283)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHH-EEEE-EEEEECCCCCHHHHHHHHHCCHHHHHHHHCC
T ss_conf 7789778899999999999999999-85349999999998682-4421-4121114333899878764221354987189
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 85663211147888899999999986535666641013351243388778997434568989987642102210899999
Q gi|254780360|r 161 DVSIASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLGFASVTYGII 240 (305)
Q Consensus 161 ~~~~~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~~~g~~yli~ 240 (305)
T Consensus 158 ~~~~~~~ll~~~~~~W~~~~dtiYA~qD~~dD~k~Gv~S~av~~G~~~~~~i~~~~~~~~~ll~~~~~~~~~-~~~y~i~ 236 (283)
T PRK12877 158 KLDIASILMYIGCIFWTIGYDTIYAAQDKKDDKKLGVKSTAIYFGNKIKLWLYRLYIIFILMWISAGIIANL-HNIFYLA 236 (283)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_conf 878799999999999999999999842257699749987784127526999999999999999999999874-4999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999999950488997899999879899999999999998660
Q gi|254780360|r 241 VFFLGYHFTLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVDHLI 291 (305)
Q Consensus 241 ali~~~~~l~~a~~~~~~~~~~~~k~a~klF~~S~~yl~ilfl~liid~~i 291 (305)
T Consensus 237 ~~~~~~~~~~-~~---~~~~~~~~~~~~~~F~~N~~~g~~if~gi~l~~li 283 (283)
T PRK12877 237 ILAAAILFYY-QY---ATLDFDNPANCMYRFKANNYVGLLLFLGFCLGRIV 283 (283)
T ss_pred HHHHHHHHHH-HH---HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999-99---98589997999999998399999999999998739