HHsearch alignment for GI: 254780360 and conserved domain: PRK13105

>PRK13105 ubiA prenyltransferase; Reviewed.
Probab=99.89  E-value=2.6e-21  Score=145.55  Aligned_cols=273  Identities=16%  Similarity=0.155  Sum_probs=161.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCHHH---
Q ss_conf             36537999999626899999999999999708989989999999999999999998863306612013712107056---
Q gi|254780360|r    4 QVFRLNFFIVLLKPRVMSLAIYTAFVGIVLAPGHISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMARTASRPI---   80 (305)
Q Consensus         4 ~~~k~~~y~~L~kp~~~~~~~~~~~~g~~la~~~~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT~~RPl---   80 (305)
T Consensus         5 ~~~~l~~l~~~SRP~~Winta~p~~~g~~l~~~~~~~~~~~~~i~flvP~Nl~mYGINDvfD~esD~~NPRKgg~Ega~l   84 (291)
T PRK13105          5 MMELIRQILLSSRPLSWVNTAYPFAAAYLLTAGEIDWLFWLGTVFFLIPYNLAMYGINDVFDYESDLRNPRKGGVEGAVL   84 (291)
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             88999999984687311032268999999972545589999999999878888734203332131023888788663014


Q ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHCCCCCCHHHHHHHHHHHHHHEEEC
Q ss_conf             65304789899988887766899988634458999999988865444544---310266560588887766422110132
Q gi|254780360|r   81 PLGQISPWEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIYTI---WLKRFTPQNIVIGGIAGAIPPMIGWAS  157 (305)
Q Consensus        81 ~~g~is~~~a~~~~~~l~~~~~~~l~~~~n~~~~~l~~~~~~~y~~iYtp---~lKR~t~~~~~~~~i~ga~~~l~g~~a  157 (305)
T Consensus        85 ~~~~~--r~~l~~~~~~~~pfl~~l~~~~~~~~~~~l~~~~f~-~vaYSaPpLRFKe~P~LDS~ss~~~~v~pa~~~~~l  161 (291)
T PRK13105         85 PKASH--RPLLWASAITTIPFLVVLVIAGTWMSWAVLAVSVFA-VIAYSAAGLRFKERPFLDALTSSTHFTSPALYGLTL  161 (291)
T ss_pred             CCCCC--CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             70015--503599999866899999981778899999999999-850258860346665532112211564489999998


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCCHH
Q ss_conf             3688566321114788889999999998653566664101335124338877899743-456898998764210221089
Q gi|254780360|r  158 VTGDVSIASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILI-YTVLTSIVGVLPTMLGFASVT  236 (305)
Q Consensus       158 ~~~~~~~~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~-ysi~~~llsll~~~~~~~g~~  236 (305)
T Consensus       162 ~g~~~~~~~~~~~~a~~lW~masHaF~AvqDI~~DR~aGI~siAT~lGargt~~~a~~~y~~Aa~l~~~----~~~--P~  235 (291)
T PRK13105        162 AGATFTPALWIALGAFFLWGMASQAFGAVQDVVADREAGLSSIATVLGARGTVRLAVLLYLLAAVLMLF----TPW--PG  235 (291)
T ss_pred             HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHH----CCC--CH
T ss_conf             078888147999999999999987740335665014319132343542158999999999999999985----688--18


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999999999999950488997899---999879899999999999998
Q gi|254780360|r  237 YGIIVFFLGYHFTLWAWRTFLCKEDKDIRVT---KKLFLESITYLFVLFTILMVD  288 (305)
Q Consensus       237 yli~ali~~~~~l~~a~~~~~~~~~~~~k~a---~klF~~S~~yl~ilfl~liid  288 (305)
T Consensus       236 ~~aa~~--~l~yl~~~~~~~-~~~d~~~e~Anr~wr~fl~ln~~~G~vvt~~Li~  287 (291)
T PRK13105        236 WIAAIL--ALPYILNAARFW-NITDTDAEQANRGWKRFLWLNYLVGFVVTMLLIA  287 (291)
T ss_pred             HHHHHH--HHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999--999999872650-4778998888667999999999999999999999