HHsearch alignment for GI: 254780360 and conserved domain: PRK13387
>PRK13387 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional.
Probab=99.92 E-value=8.1e-22 Score=148.54 Aligned_cols=280 Identities=16% Similarity=0.199 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHCCCHHHHCHHH
Q ss_conf 53799999962689999999999999970---8989989999999999999999998863306--612013712107056
Q gi|254780360|r 6 FRLNFFIVLLKPRVMSLAIYTAFVGIVLA---PGHISVLKSVISIFAIAMGAGASGALNMYYD--ADIDKMMARTASRPI 80 (305)
Q Consensus 6 ~k~~~y~~L~kp~~~~~~~~~~~~g~~la---~~~~~~~~~~~~~~~~~l~~~a~~~~Nd~~D--~~iD~~~~RT~~RPl 80 (305)
T Consensus 1 Msl~~w~~~~Rp~tl~asv~PvllG~a~a~~~~~~f~~~~~ll~ll~~~~~qi~~N~~NDY~D~~~G~D~~~~~g~~~~i 80 (317)
T PRK13387 1 MSAKLFLKLVEIHTKIASFFPVILGTLFSLYYVAKIDWLLFLAFMVAMLAFDIATTAINNYMDFKKALDTADYVGIGNGI 80 (317)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 97899999876777899999999999999996698779999999999999999998766255650377875445888600
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCHHHHHHHHH-HHHH
Q ss_conf 653047898999888877668999---8863445899999998886544454----4310266560588887766-4221
Q gi|254780360|r 81 PLGQISPWEAWVLGVSLAVSSIVI---MGLAINWVSATLLFMSIFCYVVIYT----IWLKRFTPQNIVIGGIAGA-IPPM 152 (305)
Q Consensus 81 ~~g~is~~~a~~~~~~l~~~~~~~---l~~~~n~~~~~l~~~~~~~y~~iYt----p~lKR~t~~~~~~~~i~ga-~~~l 152 (305)
T Consensus 81 ~~g~ls~~~v~~~~~~~~~~a~i~Gl~L~~~tg~~~l~iG~~~~~~-~~~YT~gP~p-l~-y~glGEi~v~~~~G~~~v~ 157 (317)
T PRK13387 81 GQHGLKPKNVLTVILLMYVVAAILGVYLCMNTSWLLLVIGLICFAI-GILYTGGPLP-LS-RMPLGEIFSGLTMGFGIFL 157 (317)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCC-CC-CCCCHHHHHHHHHHHHHHH
T ss_conf 5799799999999999999999999999998437999999999999-7643279966-47-7672279999998899988
Q ss_pred HEEECCCCCCCCCCCCHHHHHHHHH-------------HHH-HH------HHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 1013236885663211147888899-------------999-99------998653566664101335124338877899
Q gi|254780360|r 153 IGWASVTGDVSIASLVMFLIIFLWT-------------PPH-FW------SLALLCKDDYQKASIPMLPNVVTDRTTKMH 212 (305)
Q Consensus 153 ~g~~a~~~~~~~~~~~l~~~~~~W~-------------~~~-~~------~~a~~d~~dd~k~Gikslpv~~G~k~t~~~ 212 (305)
T Consensus 158 ~~~yv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~slp~~ll~~~IL~~NN~rD~e~D~~~gk~TL~v~lG~~~a~~~ 237 (317)
T PRK13387 158 LAVYINTNTITIESLLFQGEMFTIQGNLIAIIAIGVISLPIIFTIANIMLANNLRDLDEDIKNHRYTLVYYIGREKGVVL 237 (317)
T ss_pred HHHHEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEEECHHHHHHH
T ss_conf 87413304454023311232000110036689999998889999999998565751366997698017989885779999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 743456898998764210221089999999999999999999995048899--7899-9998798999999999999986
Q gi|254780360|r 213 ILIYTVLTSIVGVLPTMLGFASVTYGIIVFFLGYHFTLWAWRTFLCKEDKD--IRVT-KKLFLESITYLFVLFTILMVDH 289 (305)
Q Consensus 213 i~~ysi~~~llsll~~~~~~~g~~yli~ali~~~~~l~~a~~~~~~~~~~~--~k~a-~klF~~S~~yl~ilfl~liid~ 289 (305)
T Consensus 238 y~~l~~~ayl~ii~~v~~g~~p~~~--ll~ll~~P~~~k~~~~~~~~~~k~~~~~~~~k~t~~~~~~~gll~~~g~ll~~ 315 (317)
T PRK13387 238 FAVLFYASYLAIAVIVLMGYISPWA--LVSFLTLRKPISNIQSFQKEAKDPKYFRIAIKNTVLTNTTFGFLLSASLLIQY 315 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999985523999--99999999999999999856999068999999999999999999999999986
Q ss_pred H
Q ss_conf 6
Q gi|254780360|r 290 L 290 (305)
Q Consensus 290 ~ 290 (305)
T Consensus 316 l 316 (317)
T PRK13387 316 L 316 (317)
T ss_pred H
T ss_conf 2