HHSEARCH alignment of GI: 254780361 and SCOP domain: d2apob1

Alignment
>d2apob1 g.41.16.1 (B:403-457) Ribosome biogenesis protein Nop10 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=92.06  E-value=0.026  Score=30.43  Aligned_cols=22  Identities=18%  Similarity=0.072  Sum_probs=19.4

Q ss_pred             CEEECCCCCCEEEEEEEECCCCC
Q ss_conf             37887899782440464257786
Q gi|254780361|r   26 AYVEDKKSGELRRPHHVDMKTGL   48 (61)
Q Consensus        26 ~l~~c~~cG~~~~~H~vc~~cG~   48 (61)
                      .|..|++||.+.| ..+||.||-
T Consensus         3 klrkC~~C~~YTL-~~~CP~CG~   24 (55)
T d2apob1           3 RMKKCPKCGLYTL-KEICPKCGE   24 (55)
T ss_dssp             CCEECTTTCCEES-SSBCSSSCS
T ss_pred             CEEECCCCCCEEC-CCCCCCCCC
T ss_conf             3234873665433-452767888


SCOP domain information

class: Small proteins
fold: Rubredoxin-like
superfamily: Nop10-like SnoRNP
family: Nucleolar RNA-binding protein Nop10-like
domain: Ribosome biogenesis protein Nop10
species: Archaeon Methanococcus jannaschii [TaxId: 2190]