HHsearch alignment for GI: 254780363 and conserved domain: COG0543
>COG0543 UbiB 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [Coenzyme metabolism / Energy production and conversion].
Probab=100.00 E-value=6.5e-33 Score=239.86 Aligned_cols=208 Identities=22% Similarity=0.325 Sum_probs=160.0
Q ss_pred CEEEEEEEECCCCEEEEEEECCCC-CCCCCCCEEEEEEECCCEEEEEEEEECCCCC-CCCEEEEEEEECCCCCCCCCCCC
Q ss_conf 068988884799869999807789-9839971799998439858876654228576-88605899994388856610012
Q gi|254780363|r 14 CESVISIKHYTDRLFRFCITRPKS-FRFRSGEFVMLGLMVNGRRISRAYSMASPCW-DDKLEFFSIKVEQGPLTTHLQNI 91 (264)
Q Consensus 14 ~~~V~~v~~~t~~~~~~~l~~~~~-~~f~~GQ~v~i~~~~~g~~~~R~YSiaS~p~-~~~le~~i~~v~~G~~S~~L~~l 91 (264)
T Consensus 9 ~~~I~~~~~is~~~~~l~~~~~~~~~~~~pGQfv~l~~~~---~~~~P~si~~~~~~~g~~~l~i~~~~~G~~T~~i~~~ 85 (252)
T COG0543 9 SYKVVEKEEISPDTFLLRLRLPFVALTFKPGQFVMLRVPG---GVRRPYSLASAPDDKGELELHIRVYEVGKVTKYIFGL 85 (252)
T ss_pred CCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCC---CCEEEEECCCCCCCCCCEEEEEEEEECCHHHHHHHHC
T ss_conf 6279999970797499999676534667999789999189---9678732256766678169999997188789999744
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 38851002578873216432235866999975867277899887634103578579999519988987335668989864
Q gi|254780363|r 92 QPGDTILLHKKSTGTLVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTYEKFDEVIVTQTCRQVVELQYGIDVMHEISQD 171 (264)
Q Consensus 92 ~~Gd~i~i~~~p~G~f~~d~~~~~~~lilIAgGtGItP~~sii~~~~~~~~~~~i~L~~g~R~~~dl~y~~~l~~~~~~~ 171 (264)
T Consensus 86 k~gd~i~v~G-P~G~~~~~~~-~~~~vlliagGtG~aPl~~i~~~~~~~~~~~~V~~~~G~~~~~dl~~~~el~~~~~~- 162 (252)
T COG0543 86 KEGDKIRVRG-PLGNGFLREK-IGKPVLLIAGGTGIAPLYAIAKELKEKGDANKVTLLYGARTAKDLLLLDELEELAEK- 162 (252)
T ss_pred CCCCEEEEEC-CCCCCCCCCC-CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCHHHHHHHHCC-
T ss_conf 6798899975-6778713345-687299997634688899999999866898558999941767872538999974166-
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECCHHHHHHHHHHHHHCCCCC
Q ss_conf 4577740588438982045444446567754311047885289988731378999689899999999999869853
Q gi|254780363|r 172 EILKDLIGQKLKFYRTVTQEDYLYKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGSPTMIVDMKDLLIAKKFRE 247 (264)
Q Consensus 172 ~~~~~~~~~~~~~~~~~s~e~~~~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGpp~Mi~~v~~~L~~~G~~~ 247 (264)
T Consensus 163 -----------~~~~~~~---~~~~G~~-G~v~~~~~~~~-----~~~~~~~v~~cGp~~M~~~v~~~~~~~g~~~ 218 (252)
T COG0543 163 -----------EVHPVTD---DGWKGRK-GFVTTDVLKEL-----LDLEVDDVYICGPPAMVKAVREKLKEYGVPI 218 (252)
T ss_pred -----------EEEEEEC---CCCCCCC-CCCCHHHHHHH-----CCCCCCEEEEECCHHHHHHHHHHHHHCCCCH
T ss_conf -----------0799827---9987644-74128998653-----4566677999798899999999998729830