HHsearch alignment for GI: 254780363 and conserved domain: KOG3378
>KOG3378 consensus.
Probab=99.86 E-value=7.9e-22 Score=165.75 Aligned_cols=214 Identities=16% Similarity=0.211 Sum_probs=139.0
Q ss_pred CCCEEEEEEEECCCCEEEEEEECCCC-C---CCCCCCEEEEEEECCCEE----EEEEEEECCCCCCCCEEEEEEEECCCC
Q ss_conf 31068988884799869999807789-9---839971799998439858----876654228576886058999943888
Q gi|254780363|r 12 VYCESVISIKHYTDRLFRFCITRPKS-F---RFRSGEFVMLGLMVNGRR----ISRAYSMASPCWDDKLEFFSIKVEQGP 83 (264)
Q Consensus 12 ~~~~~V~~v~~~t~~~~~~~l~~~~~-~---~f~~GQ~v~i~~~~~g~~----~~R~YSiaS~p~~~~le~~i~~v~~G~ 83 (264)
T Consensus 149 ~~~F~vT~~~~~sSDv~~~~~~PK~~~~~~~~~~PGQYvsV~~~~~~~~~k~~~~~~~S~~~~t~rN~~R~sVr~~A~G~ 228 (385)
T KOG3378 149 EVEFKVTELINESSDVKSVYLGPKDPAFRISHAHPGQYVSVLWEIPGLSHKTLREYSLSNRVDTCRNQFRISVRRVAGGV 228 (385)
T ss_pred CCCEEEEEEECCCCCEEEEEECCCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHCHH
T ss_conf 56545432100135516898558885413225899846898612776301688988876404664155268875011105
Q ss_pred CCCCCC-CCCCCCEEECCCCCCCCCCCCCC--CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
Q ss_conf 566100-12388510025788732164322--358669999758672778998876341035785799995199889873
Q gi|254780363|r 84 LTTHLQ-NIQPGDTILLHKKSTGTLVLDAL--IPGNRLYLFSTGTGIAPFVSVIRDPGTYEKFDEVIVTQTCRQVVELQY 160 (264)
Q Consensus 84 ~S~~L~-~l~~Gd~i~i~~~p~G~f~~d~~--~~~~~lilIAgGtGItP~~sii~~~~~~~~~~~i~L~~g~R~~~dl~y 160 (264)
T Consensus 229 VS~~~H~~~KVGD~v~~S~-PAG~F~~~r~~~~~N~PL~~~a~GiGiTPLi~iiE~~~---------~C~~~RP~~~--- 295 (385)
T KOG3378 229 VSNFVHDNLKVGDIVGVSP-PAGNFVYKRSEENVNRPLLCFAGGIGITPLIPIIETAL---------LCYSSRPFKQ--- 295 (385)
T ss_pred HHHHHHCCCCCCCEEECCC-CCCCCEEEHHHHCCCCCEEEECCCCCCCCCHHHHHHHH---------HCCCCCCHHH---
T ss_conf 6877602443355330168-87663200234436875588637767541089999887---------4078986799---
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECCHHHHHHHHHHH
Q ss_conf 35668989864457774058843898204544444656775431104788528998873137899968989999999999
Q gi|254780363|r 161 GIDVMHEISQDEILKDLIGQKLKFYRTVTQEDYLYKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGSPTMIVDMKDLL 240 (264)
Q Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~e~~~~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGpp~Mi~~v~~~L 240 (264)
T Consensus 296 --~~~~~-------~~K~k~~~K~~e~~~~E~s~~~~~IV~~~-~~~iI~~~~L~~~~~s~~DiY~~G~~~~M~~~~~~L 365 (385)
T KOG3378 296 --WLEQL-------KLKYKENLKLKEFFSEESSVTKEQIVDEV-MTRIINEEDLEKLDLSECDIYMLGPNNYMRFVKQEL 365 (385)
T ss_pred --HHHHH-------HHHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHCCHHHHHHCCHHHCCEEEECCHHHHHHHHHHH
T ss_conf --99998-------89899889899999876512103331002-353058988623683117566637389999999999
Q ss_pred HHCCCCCC
Q ss_conf 98698531
Q gi|254780363|r 241 IAKKFREG 248 (264)
Q Consensus 241 ~~~G~~~~ 248 (264)
T Consensus 366 ~~L~~~~~ 373 (385)
T KOG3378 366 VKLGVEPN 373 (385)
T ss_pred HHHCCCCC
T ss_conf 98467866