HHsearch alignment for GI: 254780363 and conserved domain: PRK08051

>PRK08051 fre FMN reductase; Validated.
Probab=100.00  E-value=0  Score=348.85  Aligned_cols=227  Identities=18%  Similarity=0.194  Sum_probs=189.7

Q ss_pred             CCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCC-CCEEEEEEEECCCCCCCCCC-
Q ss_conf             3106898888479986999980778998399717999984398588766542285768-86058999943888566100-
Q gi|254780363|r   12 VYCESVISIKHYTDRLFRFCITRPKSFRFRSGEFVMLGLMVNGRRISRAYSMASPCWD-DKLEFFSIKVEQGPLTTHLQ-   89 (264)
Q Consensus        12 ~~~~~V~~v~~~t~~~~~~~l~~~~~~~f~~GQ~v~i~~~~~g~~~~R~YSiaS~p~~-~~le~~i~~v~~G~~S~~L~-   89 (264)
T Consensus         2 t~~a~V~~i~~lt~dv~~l~L~~~~~~~f~pGQy~~l~~~~~---~~R~ySias~P~~~~~lel~I~~~~~g~~~~~l~~   78 (232)
T PRK08051          2 TISCKVTSVEPITDTVYRVRLVPEQPFSFKAGQYLMVVMGEK---DKRPFSIASTPDEKGFIELHIGASELNSYAMAVVE   78 (232)
T ss_pred             CEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCC---CCEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHH
T ss_conf             278999998706998699999459988889998599991898---86783367789999829999754289842589996


Q ss_pred             CCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             12388510025788732164322358669999758672778998876341035785799995199889873356689898
Q gi|254780363|r   90 NIQPGDTILLHKKSTGTLVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTYEKFDEVIVTQTCRQVVELQYGIDVMHEIS  169 (264)
Q Consensus        90 ~l~~Gd~i~i~~~p~G~f~~d~~~~~~~lilIAgGtGItP~~sii~~~~~~~~~~~i~L~~g~R~~~dl~y~~~l~~~~~  169 (264)
T Consensus        79 ~l~~G~~v~v~g-P~G~f~l~~-~~~~p~vlIAgGtGiaPi~Sml~~~~~~~~~~~i~L~~g~r~~~dl~~~~el~~l~~  156 (232)
T PRK08051         79 RLLKDGEIEVDA-PHGDAWLRD-ESERPLLLIAGGTGFSYARSILLTALARGPKRPITLYWGGREEDHLYDLDELEALSL  156 (232)
T ss_pred             CCCCCCEEEEEC-CCCCEEECC-CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCHHHHHHHHH
T ss_conf             089999999966-720569578-888838999717366578999999998599974899995599899638999999998


Q ss_pred             HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECCHHHHHHHHHHH-HHCCCCCC
Q ss_conf             64457774058843898204544444656775431104788528998873137899968989999999999-98698531
Q gi|254780363|r  170 QDEILKDLIGQKLKFYRTVTQEDYLYKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGSPTMIVDMKDLL-IAKKFREG  248 (264)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~s~e~~~~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGpp~Mi~~v~~~L-~~~G~~~~  248 (264)
T Consensus       157 ~~--------~~~~~~~~~~~~~~~w~g~~------G~v~~~i~~~~~~~~~~~~ylCGPp~Mv~a~~~~L~~~~Gv~~~  222 (232)
T PRK08051        157 KH--------PNLHFVPVVEQPEEGWRGKT------GTVLTAVMQDFGSLAEYDIYIAGRFEMAKAARELFCRERGAREE  222 (232)
T ss_pred             HC--------CCCEEEEEECCCCCCCCCCC------CCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHH
T ss_conf             88--------99179999815998868860------73899998653686589899979999999999999997599989


Q ss_pred             CCCCCCEEEEEEEEEC
Q ss_conf             5679950999987639
Q gi|254780363|r  249 SNSRPGTFVVERAFSL  264 (264)
Q Consensus       249 ~~~~~g~~~~E~~~~~  264 (264)
T Consensus       223 ------~I~~e~-F~~  231 (232)
T PRK08051        223 ------HLFGDA-FAF  231 (232)
T ss_pred             ------HEEEEE-EEE
T ss_conf             ------989743-574