HHsearch alignment for GI: 254780363 and conserved domain: PRK08051
>PRK08051 fre FMN reductase; Validated.
Probab=100.00 E-value=0 Score=348.85 Aligned_cols=227 Identities=18% Similarity=0.194 Sum_probs=189.7
Q ss_pred CCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCC-CCEEEEEEEECCCCCCCCCC-
Q ss_conf 3106898888479986999980778998399717999984398588766542285768-86058999943888566100-
Q gi|254780363|r 12 VYCESVISIKHYTDRLFRFCITRPKSFRFRSGEFVMLGLMVNGRRISRAYSMASPCWD-DKLEFFSIKVEQGPLTTHLQ- 89 (264)
Q Consensus 12 ~~~~~V~~v~~~t~~~~~~~l~~~~~~~f~~GQ~v~i~~~~~g~~~~R~YSiaS~p~~-~~le~~i~~v~~G~~S~~L~- 89 (264)
T Consensus 2 t~~a~V~~i~~lt~dv~~l~L~~~~~~~f~pGQy~~l~~~~~---~~R~ySias~P~~~~~lel~I~~~~~g~~~~~l~~ 78 (232)
T PRK08051 2 TISCKVTSVEPITDTVYRVRLVPEQPFSFKAGQYLMVVMGEK---DKRPFSIASTPDEKGFIELHIGASELNSYAMAVVE 78 (232)
T ss_pred CEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCC---CCEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHH
T ss_conf 278999998706998699999459988889998599991898---86783367789999829999754289842589996
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 12388510025788732164322358669999758672778998876341035785799995199889873356689898
Q gi|254780363|r 90 NIQPGDTILLHKKSTGTLVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTYEKFDEVIVTQTCRQVVELQYGIDVMHEIS 169 (264)
Q Consensus 90 ~l~~Gd~i~i~~~p~G~f~~d~~~~~~~lilIAgGtGItP~~sii~~~~~~~~~~~i~L~~g~R~~~dl~y~~~l~~~~~ 169 (264)
T Consensus 79 ~l~~G~~v~v~g-P~G~f~l~~-~~~~p~vlIAgGtGiaPi~Sml~~~~~~~~~~~i~L~~g~r~~~dl~~~~el~~l~~ 156 (232)
T PRK08051 79 RLLKDGEIEVDA-PHGDAWLRD-ESERPLLLIAGGTGFSYARSILLTALARGPKRPITLYWGGREEDHLYDLDELEALSL 156 (232)
T ss_pred CCCCCCEEEEEC-CCCCEEECC-CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCHHHHHHHHH
T ss_conf 089999999966-720569578-888838999717366578999999998599974899995599899638999999998
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECCHHHHHHHHHHH-HHCCCCCC
Q ss_conf 64457774058843898204544444656775431104788528998873137899968989999999999-98698531
Q gi|254780363|r 170 QDEILKDLIGQKLKFYRTVTQEDYLYKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGSPTMIVDMKDLL-IAKKFREG 248 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~s~e~~~~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGpp~Mi~~v~~~L-~~~G~~~~ 248 (264)
T Consensus 157 ~~--------~~~~~~~~~~~~~~~w~g~~------G~v~~~i~~~~~~~~~~~~ylCGPp~Mv~a~~~~L~~~~Gv~~~ 222 (232)
T PRK08051 157 KH--------PNLHFVPVVEQPEEGWRGKT------GTVLTAVMQDFGSLAEYDIYIAGRFEMAKAARELFCRERGAREE 222 (232)
T ss_pred HC--------CCCEEEEEECCCCCCCCCCC------CCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHH
T ss_conf 88--------99179999815998868860------73899998653686589899979999999999999997599989
Q ss_pred CCCCCCEEEEEEEEEC
Q ss_conf 5679950999987639
Q gi|254780363|r 249 SNSRPGTFVVERAFSL 264 (264)
Q Consensus 249 ~~~~~g~~~~E~~~~~ 264 (264)
T Consensus 223 ------~I~~e~-F~~ 231 (232)
T PRK08051 223 ------HLFGDA-FAF 231 (232)
T ss_pred ------HEEEEE-EEE
T ss_conf ------989743-574