HHsearch alignment for GI: 254780363 and conserved domain: PRK13289
>PRK13289 nitric oxide dioxygenase; Provisional.
Probab=100.00 E-value=0 Score=327.71 Aligned_cols=224 Identities=16% Similarity=0.192 Sum_probs=181.5
Q ss_pred CCCEEEEEEEECCCCEEEEEEECCCC--C-CCCCCCEEEEEEECCCE--EEEEEEEECCCCCCCCEEEEEEEECCCCCCC
Q ss_conf 31068988884799869999807789--9-83997179999843985--8876654228576886058999943888566
Q gi|254780363|r 12 VYCESVISIKHYTDRLFRFCITRPKS--F-RFRSGEFVMLGLMVNGR--RISRAYSMASPCWDDKLEFFSIKVEQGPLTT 86 (264)
Q Consensus 12 ~~~~~V~~v~~~t~~~~~~~l~~~~~--~-~f~~GQ~v~i~~~~~g~--~~~R~YSiaS~p~~~~le~~i~~v~~G~~S~ 86 (264)
T Consensus 154 ~r~f~V~~~~~es~~i~sf~l~P~Dg~~l~~f~pGQYisv~~~~p~~~~~~~R~YSLS~aP~~~~~rIsVKr~~gG~vS~ 233 (399)
T PRK13289 154 WRDFRVVKKVPESAEITSFYLEPVDGGPVAEFKPGQYLGVRLDIEGFEYQEIRQYSLSDAPNGKYYRISVKREAGGKVSN 233 (399)
T ss_pred CEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCHHH
T ss_conf 45789998997489769999981899968998999978999967999755405411378999995799999779981139
Q ss_pred CCC-CCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 100-1238851002578873216432235866999975867277899887634103578579999519988987335668
Q gi|254780363|r 87 HLQ-NIQPGDTILLHKKSTGTLVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTYEKFDEVIVTQTCRQVVELQYGIDVM 165 (264)
Q Consensus 87 ~L~-~l~~Gd~i~i~~~p~G~f~~d~~~~~~~lilIAgGtGItP~~sii~~~~~~~~~~~i~L~~g~R~~~dl~y~~~l~ 165 (264)
T Consensus 234 ~Lhd~l~vGD~l~vs~-P~G~F~L~~~-~~~plVLIAgGiGITPmlSML~~l~~~~~~r~V~liygaR~~~~~~F~~eL~ 311 (399)
T PRK13289 234 YLHDHVNVGDVLELAA-PAGDFFLDVA-SDTPVVLISGGVGITPMLSMLETLAKQQPTRPVHFIHAAENGDVHAFRDEVR 311 (399)
T ss_pred HHHHCCCCCCEEEEEC-CCEEEEECCC-CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
T ss_conf 9983899998899961-6503672687-8886799953767335999999999709998579999569879888899999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCC--------CCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECCHHHHHHHH
Q ss_conf 98986445777405884389820454444--------4656775431104788528998873137899968989999999
Q gi|254780363|r 166 HEISQDEILKDLIGQKLKFYRTVTQEDYL--------YKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGSPTMIVDMK 237 (264)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~s~e~~~--------~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGpp~Mi~~v~ 237 (264)
T Consensus 312 ~La~~~--------p~l~~~~~ys~p~~~d~~~~~~~~~Gri~----~~~l~~~-----~~~~d~~~YlCGP~~mm~av~ 374 (399)
T PRK13289 312 ALAARH--------PNLKAHTWYREPTEADRAGGDFDSEGLMD----LEWLEAA-----LPDPDADFYFCGPVPFMQFVA 374 (399)
T ss_pred HHHHHC--------CCCEEEEEECCCCCCCCCCCCCCCCCCCC----HHHHHHH-----CCCCCCEEEEECCHHHHHHHH
T ss_conf 999758--------99489999788871013577767468879----9999850-----899898899968599999999
Q ss_pred HHHHHCCCCCCCCCCCCEEEEEE
Q ss_conf 99998698531567995099998
Q gi|254780363|r 238 DLLIAKKFREGSNSRPGTFVVER 260 (264)
Q Consensus 238 ~~L~~~G~~~~~~~~~g~~~~E~ 260 (264)
T Consensus 375 ~~L~~~GVp~~------~Ih~E~ 391 (399)
T PRK13289 375 KQLLDLGVPEE------RIHYEF 391 (399)
T ss_pred HHHHHCCCCHH------HEEEEC
T ss_conf 99997799789------978833