HHsearch alignment for GI: 254780363 and conserved domain: TIGR02911
>TIGR02911 sulfite_red_B sulfite reductase, subunit B; InterPro: IPR014260 This entry represents subunit B, one of the three subunits of the anaerobic sulphite reductase of Salmonella, and close homologues from various Clostridium species, where the three-gene neighbourhood is preserved. Two such gene clusters are found in Clostridium perfringens, but it may be that these sets of genes correspond to the distinct assimilatory and dissimilatory forms seen in Clostridium pasteurianum. Note that any one of these enzymes may have secondary substrates such as NH2OH, SeO3(2-), and SO3(2-). Heterologous expression of the anaerobic sulphite reductase of Salmonella confers on Escherichia coli the ability to produce hydrogen sulphide gas from sulphite..
Probab=99.95 E-value=7.3e-27 Score=199.43 Aligned_cols=208 Identities=17% Similarity=0.281 Sum_probs=166.1
Q ss_pred CCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCC
Q ss_conf 53106898888479986999980778998399717999984398588766542285768860589999438885661001
Q gi|254780363|r 11 NVYCESVISIKHYTDRLFRFCITRPKSFRFRSGEFVMLGLMVNGRRISRAYSMASPCWDDKLEFFSIKVEQGPLTTHLQN 90 (264)
Q Consensus 11 ~~~~~~V~~v~~~t~~~~~~~l~~~~~~~f~~GQ~v~i~~~~~g~~~~R~YSiaS~p~~~~le~~i~~v~~G~~S~~L~~ 90 (264)
T Consensus 4 lP~~~~Il~i~~HT~iey~FR~~--~~g~vkpGQF~EVSlPk~GEa---PISV~~-~Ge~~~DL~IR~V--G~VT~~~f~ 75 (261)
T TIGR02911 4 LPFKSEILEIIKHTDIEYTFRMS--YDGEVKPGQFFEVSLPKYGEA---PISVSG-IGEGYIDLTIRRV--GKVTDEVFT 75 (261)
T ss_pred CCCCHHEEEEECCCCCCEEEEEE--EEEEECCCCEEEEECCCCCCC---CEEEEC-CCCCEEEEEEECC--CCEEHHHEE
T ss_conf 76201000100368874257788--742215766699823875888---515413-6886588987213--401111200
Q ss_pred CCCCCEEECCCCCCCC-CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-CCCCCEEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 2388510025788732-1643223586699997586727789988763410-3578579999519988987335668989
Q gi|254780363|r 91 IQPGDTILLHKKSTGT-LVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTY-EKFDEVIVTQTCRQVVELQYGIDVMHEI 168 (264)
Q Consensus 91 l~~Gd~i~i~~~p~G~-f~~d~~~~~~~lilIAgGtGItP~~sii~~~~~~-~~~~~i~L~~g~R~~~dl~y~~~l~~~~ 168 (264)
T Consensus 76 ~~~G~~~flRG-pYGNGf~vd~yk-~Kel~vvAGGTGvaPVkG~~~yF~~N~~e~k~l~~i~GfK~~~~iLfk~d~~~W~ 153 (261)
T TIGR02911 76 LKEGDKLFLRG-PYGNGFDVDNYK-DKELVVVAGGTGVAPVKGVVEYFVKNPKEIKSLNLILGFKTPDDILFKEDIAEWK 153 (261)
T ss_pred ECCCCEEEEEC-CCCCCCCHHHCC-CCCEEEEECCCCCCHHHHHHHHHHHCHHHCCEEEEEEECCCCCCCCCHHHHHHHH
T ss_conf 03797269864-888985523306-8617998279776603477777530601103477997225711100077899887
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCC---CCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECCHHHHHHHHHHHHHCCC
Q ss_conf 86445777405884389820454444---465677543110478852899887313789996898999999999998698
Q gi|254780363|r 169 SQDEILKDLIGQKLKFYRTVTQEDYL---YKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGSPTMIVDMKDLLIAKKF 245 (264)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~s~e~~~---~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGpp~Mi~~v~~~L~~~G~ 245 (264)
T Consensus 154 ~~-----------~n~~lT~D~ae~d~~~~~G~vT~~~~~------l~l~--~~~~~~~ivVGPPiM~~F~v~~lL~~G~ 214 (261)
T TIGR02911 154 EN-----------INLVLTLDEAEEDYKGNIGLVTKYIPE------LKLK--DIEEVQAIVVGPPIMMKFTVQELLKKGL 214 (261)
T ss_pred HC-----------CCEEEEEECCCCCCCCCEEEEECCCCC------CCCC--CCCEEEEEEECCCHHHHHHHHHHHHHCC
T ss_conf 22-----------677999833677765333010200023------5412--3332579997798466788999987068
Q ss_pred CC
Q ss_conf 53
Q gi|254780363|r 246 RE 247 (264)
Q Consensus 246 ~~ 247 (264)
T Consensus 215 K~ 216 (261)
T TIGR02911 215 KE 216 (261)
T ss_pred CC
T ss_conf 60