HHsearch alignment for GI: 254780363 and conserved domain: cd06200
>cd06200 SiR_like1 Cytochrome p450- like alpha subunits of E. coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ gene) are of the cytochrome p450 (CyPor) family having FAD and FMN as prosthetic groups and utilizing NADPH. Cypor (including cyt -450 reductase, nitric oxide synthase, and methionine synthase reductase) are ferredoxin reductase (FNR)-like proteins with an additional N-terminal FMN domain and a connecting sub-domain inserted within the flavin binding portion of the FNR-like domain. The connecting domain orients the N-terminal FMN domain with the C-terminal FNR domain. NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD
Probab=99.97 E-value=3e-30 Score=222.09 Aligned_cols=223 Identities=18% Similarity=0.221 Sum_probs=161.6
Q ss_pred EEEEEEECCCC-----EEEEEEECC-CCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECC-----CCC
Q ss_conf 89888847998-----699998077-8998399717999984398588766542285768860589999438-----885
Q gi|254780363|r 16 SVISIKHYTDR-----LFRFCITRP-KSFRFRSGEFVMLGLMVNGRRISRAYSMASPCWDDKLEFFSIKVEQ-----GPL 84 (264)
Q Consensus 16 ~V~~v~~~t~~-----~~~~~l~~~-~~~~f~~GQ~v~i~~~~~g~~~~R~YSiaS~p~~~~le~~i~~v~~-----G~~ 84 (264)
T Consensus 2 ~l~~r~~~np~s~g~~~~~l~l~~~~~~~~~~aGDll~I~-p~-~p~~pR~YSIAS~p~dg~v~L~Vr~~~~~~~~~Gvc 79 (245)
T cd06200 2 RLQARVLLNPGSQGAPLWRLRLTPPDAGAQWQAGDIAEIG-PR-HPLPHREYSIASLPADGALELLVRQVRHADGGLGLG 79 (245)
T ss_pred CCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEE-CC-CCCCCCCEEEEECCCCCEEEEEEEEEECCCCCCEEE
T ss_conf 4430000598898885589997479999997888877851-79-999875446615699997999999974589996664
Q ss_pred CCCCCC-CCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHH-HHHHHH
Q ss_conf 661001-238851002578873216432235866999975867277899887634103578579999519988-987335
Q gi|254780363|r 85 TTHLQN-IQPGDTILLHKKSTGTLVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTYEKFDEVIVTQTCRQVV-ELQYGI 162 (264)
Q Consensus 85 S~~L~~-l~~Gd~i~i~~~p~G~f~~d~~~~~~~lilIAgGtGItP~~sii~~~~~~~~~~~i~L~~g~R~~~-dl~y~~ 162 (264)
T Consensus 80 S~~L~~~~~~Gd~v~~~i~~~~~F~lP~--~~~PvImIg~GTGIAPfrgfl~er~~~~-~~~~wLfFG~R~~~~D~ly~~ 156 (245)
T cd06200 80 SGWLTRHAPIGASVALRLRENPGFHLPD--DGRPLILIGNGTGLAGLRSHLRARARAG-RHRNWLLFGERQAAHDFFCRE 156 (245)
T ss_pred HHHHHCCCCCCCEEEEEECCCCCCCCCC--CCCCEEEEECCCCCHHHHHHHHHHHHCC-CCCCEEEEECCCCCCCHHHHH
T ss_conf 8786347889998999944598675899--9998899956857177899999999726-688389950458745424899
Q ss_pred HHHHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECCH-HHHHHHHHHH
Q ss_conf 66898986445777405884-389820454444465677543110478852899887313789996898-9999999999
Q gi|254780363|r 163 DVMHEISQDEILKDLIGQKL-KFYRTVTQEDYLYKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGSP-TMIVDMKDLL 240 (264)
Q Consensus 163 ~l~~~~~~~~~~~~~~~~~~-~~~~~~s~e~~~~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGpp-~Mi~~v~~~L 240 (264)
T Consensus 157 el~~~~~~g---------~l~~l~~AfSRd~~-~k~YVQd~l~e~~-~~v---~~~l~~ga~iyVCG~~~~Ma~~V~~aL 222 (245)
T cd06200 157 ELEAWQAAG---------HLARLDLAFSRDQA-QKRYVQDRLRAAA-DEL---RAWVAEGAAIYVCGSLQGMAPGVDAVL 222 (245)
T ss_pred HHHHHHHCC---------CCCEEEEEECCCCC-CCCCHHHHHHHHH-HHH---HHHHHCCCEEEEECCCHHHHHHHHHHH
T ss_conf 999999709---------97467789803699-9873465688769-999---999987949999899416579999999
Q ss_pred HHC----CCCCCCCCCCCEEEEE
Q ss_conf 986----9853156799509999
Q gi|254780363|r 241 IAK----KFREGSNSRPGTFVVE 259 (264)
Q Consensus 241 ~~~----G~~~~~~~~~g~~~~E 259 (264)
T Consensus 223 ~~Il~~~~l~--~L~~~gRY~~D 243 (245)
T cd06200 223 DEILGEEAVE--ALLAAGRYRRD 243 (245)
T ss_pred HHHHHHHHHH--HHHHCCCEECC
T ss_conf 9999999999--99987984111