HHsearch alignment for GI: 254780363 and conserved domain: cd06201
>cd06201 SiR_like2 Cytochrome p450- like alpha subunits of E. coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ gene) are of the cytochrome p450 (CyPor) family having FAD and FMN as prosthetic groups and utilizing NADPH. Cypor (including cyt -450 reductase, nitric oxide synthase, and methionine synthase reductase) are ferredoxin reductase (FNR)-like proteins with an additional N-terminal FMN domain and a connecting sub-domain inserted within the flavin binding portion of the FNR-like domain. The connecting domain orients the N-terminal FMN domain with the C-terminal FNR domain. NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via F
Probab=99.98 E-value=1.1e-31 Score=231.73 Aligned_cols=225 Identities=20% Similarity=0.283 Sum_probs=165.6
Q ss_pred CCCCEEEEEEEECCC----CEEEEEEECCCC-------CCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEE
Q ss_conf 531068988884799----869999807789-------983997179999843985887665422857688605899994
Q gi|254780363|r 11 NVYCESVISIKHYTD----RLFRFCITRPKS-------FRFRSGEFVMLGLMVNGRRISRAYSMASPCWDDKLEFFSIKV 79 (264)
Q Consensus 11 ~~~~~~V~~v~~~t~----~~~~~~l~~~~~-------~~f~~GQ~v~i~~~~~g~~~~R~YSiaS~p~~~~le~~i~~v 79 (264)
T Consensus 44 ~~~~~~L~~R~~ln~~~~~~t~ilrl~~~~~~~~~~~~p~f~aGDLl~i~-P-p~~~~~R~YSiAs~~~dg~~~l~Vr~~ 121 (289)
T cd06201 44 RTKALELVERKDYGAAVQAPTAILRFKPAKRKLSGKGLPSFEAGDLLGIL-P-PGSDVPRFYSLASSSSDGFLEICVRKH 121 (289)
T ss_pred CCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEC-C-CCCCCCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 76143898411049877897179998526455444668888877732334-8-999987522404369999799999967
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHH-HH
Q ss_conf 38885661001238851002578873216432235866999975867277899887634103578579999519988-98
Q gi|254780363|r 80 EQGPLTTHLQNIQPGDTILLHKKSTGTLVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTYEKFDEVIVTQTCRQVV-EL 158 (264)
Q Consensus 80 ~~G~~S~~L~~l~~Gd~i~i~~~p~G~f~~d~~~~~~~lilIAgGtGItP~~sii~~~~~~~~~~~i~L~~g~R~~~-dl 158 (264)
T Consensus 122 ~~GlcS~~L~~L~~Gd~i~~~ir~n~~F~~P~--~~~PvImIg~GTGIAPfrgfl~~~~---~~~~~~LffG~R~~~~D~ 196 (289)
T cd06201 122 PGGLCSGYLHGLKPGDTIKAFIRPNPSFRPAK--GAAPVILIGAGTGIAPLAGFIRANA---ARRPMHLYWGGRDPASDF 196 (289)
T ss_pred CCCCCHHHHHCCCCCCEEEEEEECCCCCCCCC--CCCCEEEEECCCCCHHHHHHHHHHH---HCCCEEEEECCCCCCCCH
T ss_conf 99743677715999898999983499877999--9998899917867188899999765---149849995178888767
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECCHHHHHHHH
Q ss_conf 733566898986445777405884-3898204544444656775431104788528998873137899968989999999
Q gi|254780363|r 159 QYGIDVMHEISQDEILKDLIGQKL-KFYRTVTQEDYLYKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGSPTMIVDMK 237 (264)
Q Consensus 159 ~y~~~l~~~~~~~~~~~~~~~~~~-~~~~~~s~e~~~~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGpp~Mi~~v~ 237 (264)
T Consensus 197 lY~~el~~~~~~g---------~l~~l~~AfSR~~~--k~YVQd~l~~~~~-~---v~~~l~~ga~iyVCGs~~Ma~~V~ 261 (289)
T cd06201 197 LYEDELDQYLADG---------RLTQLHTAFSRTPD--GAYVQDRLRADAE-R---LRRLIEDGAQIMVCGSRAMAQGVA 261 (289)
T ss_pred HHHHHHHHHHHCC---------CCCEEEEEECCCCC--CCCHHHHHHHHHH-H---HHHHHHCCCEEEEECCCHHHHHHH
T ss_conf 8999999999769---------95257665435887--5128999999899-9---999998898999948960899999
Q ss_pred HHHHHC----CCCCCCCCCCCEEE
Q ss_conf 999986----98531567995099
Q gi|254780363|r 238 DLLIAK----KFREGSNSRPGTFV 257 (264)
Q Consensus 238 ~~L~~~----G~~~~~~~~~g~~~ 257 (264)
T Consensus 262 ~aL~~Il~~~gl~~~~l~~~GRy~ 285 (289)
T cd06201 262 AVLEEILAPQPLSLDELKLQGRYA 285 (289)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999997435399999878810