HHsearch alignment for GI: 254780363 and conserved domain: cd06221
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases. Clostridium pasteurianum inducible dissimilatory type sulfite reductase is linked to ferredoxin and reduces NH2OH and SeO3 at a lesser rate than it's normal substate SO3(2-). Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+.
Probab=100.00 E-value=1.9e-41 Score=296.89 Aligned_cols=209 Identities=24% Similarity=0.398 Sum_probs=165.5
Q ss_pred EEEEEECCCCEEEEEEECC----CCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCC-CCEEEEEEEECCCCCCCCCCCC
Q ss_conf 9888847998699998077----8998399717999984398588766542285768-8605899994388856610012
Q gi|254780363|r 17 VISIKHYTDRLFRFCITRP----KSFRFRSGEFVMLGLMVNGRRISRAYSMASPCWD-DKLEFFSIKVEQGPLTTHLQNI 91 (264)
Q Consensus 17 V~~v~~~t~~~~~~~l~~~----~~~~f~~GQ~v~i~~~~~g~~~~R~YSiaS~p~~-~~le~~i~~v~~G~~S~~L~~l 91 (264)
T Consensus 1 v~~i~~et~~v~~~~l~~~~~~~~~~~f~pGQfv~l~v~~~~~---~p~Si~s~~~~~~~l~i~vk~~--G~~T~~L~~l 75 (253)
T cd06221 1 IVEVVDETEDIKTFTLRLEDDDEELFTFKPGQFVMLSLPGVGE---APISISSDPTRRGPLELTIRRV--GRVTEALHEL 75 (253)
T ss_pred CEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCE---EEEEEECCCCCCCEEEEEEEEE--CCCCHHHHCC
T ss_conf 9699977999699999947988778895989559999799998---9898744889999899999996--7865333238
Q ss_pred CCCCEEECCCCCCCC-CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH-CCCCCEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 388510025788732-1643223586699997586727789988763410-35785799995199889873356689898
Q gi|254780363|r 92 QPGDTILLHKKSTGT-LVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTY-EKFDEVIVTQTCRQVVELQYGIDVMHEIS 169 (264)
Q Consensus 92 ~~Gd~i~i~~~p~G~-f~~d~~~~~~~lilIAgGtGItP~~sii~~~~~~-~~~~~i~L~~g~R~~~dl~y~~~l~~~~~ 169 (264)
T Consensus 76 ~~Gd~l~v~G-P~G~~F~~~~~-~~~~~lliagG~GiaPl~s~~~~l~~~~~~~~~v~l~~g~r~~~~~~~~del~~l~~ 153 (253)
T cd06221 76 KPGDTVGLRG-PFGNGFPVEEM-KGKDLLLVAGGLGLAPLRSLINYILDNREDYGKVTLLYGARTPEDLLFKEELKEWAK 153 (253)
T ss_pred CCCCEEEEEC-CCCCCCCCCCC-CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCHHHHHHHHH
T ss_conf 9999999970-67887637646-897689995462566689999999972666775799996398798120999999871
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECCHHHHHHHHHHHHHCCCCC
Q ss_conf 644577740588438982045444446567754311047885289988731378999689899999999999869853
Q gi|254780363|r 170 QDEILKDLIGQKLKFYRTVTQEDYLYKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGSPTMIVDMKDLLIAKKFRE 247 (264)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~s~e~~~~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGpp~Mi~~v~~~L~~~G~~~ 247 (264)
T Consensus 154 ~---------~~~~~~~~~~~~~~~~~G~~------G~vt~~l~~~~~~~~~~~vy~CGP~pMm~av~~~l~~~GVp~ 216 (253)
T cd06221 154 R---------SDVEVILTVDRAEEGWTGNV------GLVTDLLPELTLDPDNTVAIVCGPPIMMRFVAKELLKLGVPE 216 (253)
T ss_pred C---------CCCEEEEEEECCCCCCCCCC------CCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCH
T ss_conf 4---------79799999978987758766------858899987377868859999399999999999999849980