RPSBLAST alignment for GI: 254780363 and conserved domain: cd06216
>gnl|CDD|99812 cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.. Length = 243
Score = 59.5 bits (145), Expect = 9e-10
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 34 RP--KSFRFRSGEFVMLGLMVNGRRISRAYSMASPCWDDKLEFFSI---KVEQGPLTTHL 88
RP R+G+ V LG+ ++G R R+YS++S + ++ G ++ L
Sbjct: 38 RPNRGWPGHRAGQHVRLGVEIDGVRHWRSYSLSSS-PTQEDGTITLTVKAQPDGLVSNWL 96
Query: 89 -QNIQPGDTILLHKKSTGTLVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTYEKFDEVI 147
++ PGD + L + G VL +P RL L + G+GI P +S++R T
Sbjct: 97 VNHLAPGDVVEL-SQPQGDFVLPDPLPP-RLLLIAAGSGITPVMSMLR---TLLA----- 146
Query: 148 VTQTCRQVVELQYGIDVMHEISQDEILKDLIGQ--KLKFYRTVTQEDYLYKGRITNHILS 205
VV L Y I DE L+ L Q L+ + T+E+ GR LS
Sbjct: 147 -RGPTADVVLLYYARTREDVIFADE-LRALAAQHPNLRLHLLYTREE--LDGR-----LS 197
Query: 206 GEFYRNMDLSPLNPD-TDR-IMICGSPTMIVDMKDLL 240
L + PD DR + CG P + ++LL
Sbjct: 198 AA-----HLDAVVPDLADRQVYACGPPGFLDAAEELL 229