HHsearch alignment for GI: 254780364 and conserved domain: COG0369
>COG0369 CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism].
Probab=99.82 E-value=1e-19 Score=140.35 Aligned_cols=202 Identities=16% Similarity=0.232 Sum_probs=146.4
Q ss_pred CCCCEEEEEEEEEECCCC-----EEEEEEECCC-CCCCCCCCEEEECCCCCC----------------------------
Q ss_conf 734211789899847998-----6999980789-997389857880314586----------------------------
Q gi|254780364|r 9 AADVYCESVISVKHYTDR-----LFRFCITRPK-SFRFRSGEFVMLGLIVNG---------------------------- 54 (224)
Q Consensus 9 p~~~~~~~V~~~~~~T~~-----~~~l~l~~p~-~~~f~aGQ~~~l~~~~~g---------------------------- 54 (224)
T Consensus 218 ~~~~~~a~~~~n~~l~~~~~~k~~rhie~~l~~s~~~y~~GD~lgV~p~N~~~lV~~~l~~~gl~~~~~v~~~~~~~~~~ 297 (587)
T COG0369 218 KPAPSVAILLENRKLTGRDSDKDVRHIELDLPDSGLRYEPGDALGVWPENDPELVDEFLELLGLDPEEPVTVDGETLPLV 297 (587)
T ss_pred CCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCEECCCCEEEECCCCCHHHHHHHHHHCCCCCCCEECCCCCCCHHH
T ss_conf 66761037612567886566761689985066546403799755776789989999999973999666002478751499
Q ss_pred ------------------------------------------------------------------------CCEEEEEE
Q ss_conf ------------------------------------------------------------------------11055643
Q gi|254780364|r 55 ------------------------------------------------------------------------RPIFRAYS 62 (224)
Q Consensus 55 ------------------------------------------------------------------------~~~~R~yS 62 (224)
T Consensus 298 ~~l~~~~e~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~d~L~~f~~~~l~~~~li~~l~~lkPR~YS 377 (587)
T COG0369 298 EALKSHFEFTSAPKSLLENLAHFAGQEELRRLLEQLDIADLQDYAKRRTLIDVLRDFPPAKLPAEELIDLLPPLKPRLYS 377 (587)
T ss_pred HHHHHHEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEE
T ss_conf 99877220334268899999876388778999875205778766404519999864565678999999747667870356
Q ss_pred ECCCCCCCC--CEEE--EEEEC------CCCCCCCCCCCCC-CCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHH
Q ss_conf 205667776--0179--99615------7676531000022-22210016887533564467688179996586808899
Q gi|254780364|r 63 IASPCRDDK--LEFC--SIKVD------KGFFTTYLQNIQP-GDTILLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFA 131 (224)
Q Consensus 63 iaS~p~~~~--~~~~--i~~~~------~g~~s~~l~~~~~-gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~ 131 (224)
T Consensus 378 IsSs~~~~~~~vhltV~vV~y~~~~~~r~GvcS~~L~~~~~~g~~i~v~v~~n~nf~lp~~~~-~PiIMIG~GTGIAPFR 456 (587)
T COG0369 378 IASSPGVSPDEVHLTVGVVRYQAEGRERYGVCSGYLADLLEEGDTIPVFVQPNKNFRLPEDPE-TPIIMIGPGTGIAPFR 456 (587)
T ss_pred ECCCCCCCCCEEEEEEEEEEECCCCCCEEEECHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC-CCEEEECCCCCCHHHH
T ss_conf 516888889857999999971058885300026889864127983799953687510689999-8669986897725389
Q ss_pred HHHHHHHHCCCCCEEEEEEECCC-HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHH--------
Q ss_conf 99998653088633899994058-645430488899887533210124687599981057887766721687--------
Q gi|254780364|r 132 SMIRDPETYKKFDEVIITHTCGR-VAELQYGIDVMHEISQDEILKDLIGQKLKFYRTVTQEDYLYKGRITNH-------- 202 (224)
Q Consensus 132 silr~~~~~~~~~~i~l~~g~R~-~~dl~~~~el~~l~~~~~~~~~~~~~~~~~~~~isre~~~~~GrIt~~-------- 202 (224)
T Consensus 457 afvq~r~~~~~~gk~wLfFG~R~~~~DfLY~~Ewe~~~~~G--------~~~~l~~AfSRdq~-~KiYVQd~lre~~del 527 (587)
T COG0369 457 AFVQERAANGAEGKNWLFFGCRHFTEDFLYQEEWEEYLKDG--------VLTRLDLAFSRDQE-EKIYVQDRLREQADEL 527 (587)
T ss_pred HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCC--------CCEEEEEEEEECCC-CCCCHHHHHHHHHHHH
T ss_conf 99999986466575489965888863432599999997448--------70577889960578-8761887998738999
Q ss_pred ---HHCCCHHHHCC-CCCCCHH
Q ss_conf ---85860699678-7978712
Q gi|254780364|r 203 ---ILSGEFYRNMG-LSPLNPD 220 (224)
Q Consensus 203 ---i~~g~l~~~~~-l~~~~pe 220 (224)
T Consensus 528 ~~~l~~ga~~YVCGd~~~Ma~d 549 (587)
T COG0369 528 WEWLEEGAHIYVCGDAKGMAKD 549 (587)
T ss_pred HHHHHCCCEEEEECCCCCCHHH
T ss_conf 9999779889996887555077