HHsearch alignment for GI: 254780364 and conserved domain: PRK08345
>PRK08345 cytochrome-c3 hydrogenase subunit gamma; Provisional.
Probab=99.97 E-value=2.3e-31 Score=211.65 Aligned_cols=174 Identities=22% Similarity=0.362 Sum_probs=132.8
Q ss_pred CCEEEEEEEEEECCCCEEEE--EEECCC---CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCC
Q ss_conf 42117898998479986999--980789---9973898578803145861105564320566777601799961576765
Q gi|254780364|r 11 DVYCESVISVKHYTDRLFRF--CITRPK---SFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDDKLEFCSIKVDKGFFT 85 (224)
Q Consensus 11 ~~~~~~V~~~~~~T~~~~~l--~l~~p~---~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~~~~~~i~~~~~g~~s 85 (224)
T Consensus 7 ~p~~~~i~~~~~~t~~~~~f~l~~~~p~ia~~f~~~PGQFv~v~v~g~ge---~PiSi~~~~~~~g~l~~~~r~v-G~~T 82 (292)
T PRK08345 7 ALYRAKILEVYDLTEREKLFLLRFEDPELAESFTFKPGQFVQVTIPGVGE---VPISICSSPTRKGFFELCIRRA-GRVT 82 (292)
T ss_pred CCCEEEEEEEHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC---CCEEEECCCCCCCEEEEEEEEE-CHHH
T ss_conf 68206999843249870599999627120345860899859999689996---1058715688899899999821-8699
Q ss_pred CCCCCCCCCCCCEECCCCCCC-CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH-CCCCCEEEEEEECCCHHHHHHHHH
Q ss_conf 310000222221001688753-356446768817999658680889999998653-088633899994058645430488
Q gi|254780364|r 86 TYLQNIQPGDTILLHKKSTGD-LILDSLIPGNRLYLFSMGTGIAPFASMIRDPET-YKKFDEVIITHTCGRVAELQYGID 163 (224)
Q Consensus 86 ~~l~~~~~gd~~~~~~~p~g~-f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~-~~~~~~i~l~~g~R~~~dl~~~~e 163 (224)
T Consensus 83 ~~L~~lk~Gd~l~v~-GPlG~gf~~~~-~~~~~v~lVaGGiGiaPl~~~~~~~l~~~~~~~~v~~i~GaR~~~dllf~~E 160 (292)
T PRK08345 83 TVVHRLKEGDIVGVR-GPYGNGFPVDE-MEGMDLLLIAGGLGMAPLRSVLLYAMDNRGKYGNITLIYGAKYYEDLLFYDE 160 (292)
T ss_pred HHHHCCCCCCEEEEE-ECCCCCEECCC-CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHH
T ss_conf 999628999999997-23578630410-2695199994254545138999999872155686699997188798321898
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEEECCCC--CCCCCC
Q ss_conf 89988753321012468759998105788--776672
Q gi|254780364|r 164 VMHEISQDEILKDLIGQKLKFYRTVTQED--YLYKGR 198 (224)
Q Consensus 164 l~~l~~~~~~~~~~~~~~~~~~~~isre~--~~~~Gr 198 (224)
T Consensus 161 ~~~~~~~~~--------~~~~~~~~~~dd~~~g~~g~ 189 (292)
T PRK08345 161 LIKDLAEAE--------NVKIIQSVTRDPEWPGCHGL 189 (292)
T ss_pred HHHHHHHCC--------CCCEEEEEECCCCCCCCCCC
T ss_conf 887653203--------44128999517999865054