HHsearch alignment for GI: 254780364 and conserved domain: PRK08345

>PRK08345 cytochrome-c3 hydrogenase subunit gamma; Provisional.
Probab=99.97  E-value=2.3e-31  Score=211.65  Aligned_cols=174  Identities=22%  Similarity=0.362  Sum_probs=132.8

Q ss_pred             CCEEEEEEEEEECCCCEEEE--EEECCC---CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCC
Q ss_conf             42117898998479986999--980789---9973898578803145861105564320566777601799961576765
Q gi|254780364|r   11 DVYCESVISVKHYTDRLFRF--CITRPK---SFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDDKLEFCSIKVDKGFFT   85 (224)
Q Consensus        11 ~~~~~~V~~~~~~T~~~~~l--~l~~p~---~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~~~~~~i~~~~~g~~s   85 (224)
T Consensus         7 ~p~~~~i~~~~~~t~~~~~f~l~~~~p~ia~~f~~~PGQFv~v~v~g~ge---~PiSi~~~~~~~g~l~~~~r~v-G~~T   82 (292)
T PRK08345          7 ALYRAKILEVYDLTEREKLFLLRFEDPELAESFTFKPGQFVQVTIPGVGE---VPISICSSPTRKGFFELCIRRA-GRVT   82 (292)
T ss_pred             CCCEEEEEEEHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC---CCEEEECCCCCCCEEEEEEEEE-CHHH
T ss_conf             68206999843249870599999627120345860899859999689996---1058715688899899999821-8699


Q ss_pred             CCCCCCCCCCCCEECCCCCCC-CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH-CCCCCEEEEEEECCCHHHHHHHHH
Q ss_conf             310000222221001688753-356446768817999658680889999998653-088633899994058645430488
Q gi|254780364|r   86 TYLQNIQPGDTILLHKKSTGD-LILDSLIPGNRLYLFSMGTGIAPFASMIRDPET-YKKFDEVIITHTCGRVAELQYGID  163 (224)
Q Consensus        86 ~~l~~~~~gd~~~~~~~p~g~-f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~-~~~~~~i~l~~g~R~~~dl~~~~e  163 (224)
T Consensus        83 ~~L~~lk~Gd~l~v~-GPlG~gf~~~~-~~~~~v~lVaGGiGiaPl~~~~~~~l~~~~~~~~v~~i~GaR~~~dllf~~E  160 (292)
T PRK08345         83 TVVHRLKEGDIVGVR-GPYGNGFPVDE-MEGMDLLLIAGGLGMAPLRSVLLYAMDNRGKYGNITLIYGAKYYEDLLFYDE  160 (292)
T ss_pred             HHHHCCCCCCEEEEE-ECCCCCEECCC-CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHH
T ss_conf             999628999999997-23578630410-2695199994254545138999999872155686699997188798321898


Q ss_pred             HHHHHHHHHHHCCCCCCCEEEEEEECCCC--CCCCCC
Q ss_conf             89988753321012468759998105788--776672
Q gi|254780364|r  164 VMHEISQDEILKDLIGQKLKFYRTVTQED--YLYKGR  198 (224)
Q Consensus       164 l~~l~~~~~~~~~~~~~~~~~~~~isre~--~~~~Gr  198 (224)
T Consensus       161 ~~~~~~~~~--------~~~~~~~~~~dd~~~g~~g~  189 (292)
T PRK08345        161 LIKDLAEAE--------NVKIIQSVTRDPEWPGCHGL  189 (292)
T ss_pred             HHHHHHHCC--------CCCEEEEEECCCCCCCCCCC
T ss_conf             887653203--------44128999517999865054