HHsearch alignment for GI: 254780364 and conserved domain: cd06190
>cd06190 T4MO_e_transfer_like Toluene-4-monoxygenase electron transfer component of Pseudomonas mendocina hydroxylates toluene and forms p-cresol as part of a three component toluene-4-monoxygenase system. Electron transfer is from NADH to an NADH:ferredoxin oxidoreductase (TmoF in P. mendocina) to ferredoxin to an iron-containing oxygenase. TmoF is homologous to other mono- and dioxygenase systems within the ferredoxin reductase family.
Probab=100.00 E-value=2.1e-38 Score=254.75 Aligned_cols=189 Identities=19% Similarity=0.220 Sum_probs=153.7
Q ss_pred EEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCC-CCEEEEEEECCCCCCCCCCC-CCCC
Q ss_conf 989984799869999807899973898578803145861105564320566777-60179996157676531000-0222
Q gi|254780364|r 17 VISVKHYTDRLFRFCITRPKSFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDD-KLEFCSIKVDKGFFTTYLQN-IQPG 94 (224)
Q Consensus 17 V~~~~~~T~~~~~l~l~~p~~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~-~~~~~i~~~~~g~~s~~l~~-~~~g 94 (224)
T Consensus 1 vv~~~~~t~d~~~~~l~~~~~~~f~pGQ~v~l~i~~~~--~~R~ySi~s~p~~~~~l~~~i~~~~~G~~S~~L~~~l~~G 78 (232)
T cd06190 1 LVDVRELTHDVAEFRFALDGPADFLPGQYALLALPGVE--GARAYSMANLANASGEWEFIIKRKPGGAASNALFDNLEPG 78 (232)
T ss_pred CEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCC--EEEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCC
T ss_conf 95799917990999998299886089806999989901--2688886528999987999999943992688998648999
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC--CCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 22100168875335644676881799965868088999999865308--8633899994058645430488899887533
Q gi|254780364|r 95 DTILLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYK--KFDEVIITHTCGRVAELQYGIDVMHEISQDE 172 (224)
Q Consensus 95 d~~~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~--~~~~i~l~~g~R~~~dl~~~~el~~l~~~~~ 172 (224)
T Consensus 79 d~v~v-~gP~G~f~~~~~-~~~~~vliAgG~GItP~~s~l~~~~~~~~~~~~~v~l~~~~r~~~d~~~~~el~~l~~~~~ 156 (232)
T cd06190 79 DELEL-DGPYGLAYLRPD-EDRDIVCIAGGSGLAPMLSILRGAARSPYLSDRPVDLFYGGRTPSDLCALDELSALVALGA 156 (232)
T ss_pred CEEEE-EECCCCCCCCCC-CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCC
T ss_conf 99999-954567411677-8997899984767335999999999759788972999996099899544999999987389
Q ss_pred HHCCCCCCCEEEEEEECCCCC-------CCCCCCHHHHHC-------CCHHHHCCCCCC
Q ss_conf 210124687599981057887-------766721687858-------606996787978
Q gi|254780364|r 173 ILKDLIGQKLKFYRTVTQEDY-------LYKGRITNHILS-------GEFYRNMGLSPL 217 (224)
Q Consensus 173 ~~~~~~~~~~~~~~~isre~~-------~~~GrIt~~i~~-------g~l~~~~~l~~~ 217 (224)
T Consensus 157 --------~~~~~~~~s~~~~~~~~~~~~~~G~v~~~~~~~~~~~~~~~~~yiCGP~~m 207 (232)
T cd06190 157 --------RLRVTPAVSDAGSGSAAGWDGPTGFVHEVVEATLGDRLAEFEFYFAGPPPM 207 (232)
T ss_pred --------CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHH
T ss_conf --------969999988898555556667657599999866568878949999499999