HHsearch alignment for GI: 254780364 and conserved domain: cd06193
>cd06193 siderophore_interacting Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hy
Probab=98.90 E-value=3.8e-08 Score=69.51 Aligned_cols=137 Identities=18% Similarity=0.262 Sum_probs=104.3
Q ss_pred EEEEEECCCCEEEEEEECCCC--C-CCCCCCEEEECCCCCCC-------------------CEEEEEEECC-CCCCCCCE
Q ss_conf 989984799869999807899--9-73898578803145861-------------------1055643205-66777601
Q gi|254780364|r 17 VISVKHYTDRLFRFCITRPKS--F-RFRSGEFVMLGLIVNGR-------------------PIFRAYSIAS-PCRDDKLE 73 (224)
Q Consensus 17 V~~~~~~T~~~~~l~l~~p~~--~-~f~aGQ~~~l~~~~~g~-------------------~~~R~ySiaS-~p~~~~~~ 73 (224)
T Consensus 1 V~~~~~lsp~~~Ritl~g~~l~~~~~~~~~~~vkl~~p~~~~~~~~~~~~~~~~~~~~~~~p~~R~YTvR~~d~~~~~l~ 80 (235)
T cd06193 1 VVRVERLTPHMRRITLGGPDLAGFPSDGPDQHVKLLFPDPGQAPPVLPVLGRRRWPPEEPRPVMRTYTVRRFDPEAGELD 80 (235)
T ss_pred CCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEE
T ss_conf 90169769996999996686100888999887999847999877778766642357878888787774011778789799
Q ss_pred EEEEEECC-CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEC
Q ss_conf 79996157-67653100002222210016887533564467688179996586808899999986530886338999940
Q gi|254780364|r 74 FCSIKVDK-GFFTTYLQNIQPGDTILLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTC 152 (224)
Q Consensus 74 ~~i~~~~~-g~~s~~l~~~~~gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~ 152 (224)
T Consensus 81 iDfvlH~~~Gpas~WA~~a~~GD~i~i~-gP~g~~~~~~--~~~~~ll~gDeTAlPAia~iLe~lp~~---~~~~~~iev 154 (235)
T cd06193 81 IDFVLHGDEGPASRWAASAQPGDTLGIA-GPGGSFLPPP--DADWYLLAGDETALPAIAAILEELPAD---ARGTALIEV 154 (235)
T ss_pred EEEEECCCCCCHHHHHHHCCCCCEEEEE-CCCCCCCCCC--CCCEEEEEECCCCHHHHHHHHHHCCCC---CEEEEEEEE
T ss_conf 9999679998579999858999977888-6898878999--877799982442489999999868899---849999997
Q ss_pred CCHHHHH
Q ss_conf 5864543
Q gi|254780364|r 153 GRVAELQ 159 (224)
Q Consensus 153 R~~~dl~ 159 (224)
T Consensus 155 ~~~~d~~ 161 (235)
T cd06193 155 PDAADEQ 161 (235)
T ss_pred CCHHHCC
T ss_conf 9878725