HHsearch alignment for GI: 254780364 and conserved domain: cd06200
>cd06200 SiR_like1 Cytochrome p450- like alpha subunits of E. coli sulfite reductase (SiR) multimerize with beta subunits to catalyze the NADPH dependent reduction of sulfite to sulfide. Beta subunits have an Fe4S4 cluster and a siroheme, while the alpha subunits (cysJ gene) are of the cytochrome p450 (CyPor) family having FAD and FMN as prosthetic groups and utilizing NADPH. Cypor (including cyt -450 reductase, nitric oxide synthase, and methionine synthase reductase) are ferredoxin reductase (FNR)-like proteins with an additional N-terminal FMN domain and a connecting sub-domain inserted within the flavin binding portion of the FNR-like domain. The connecting domain orients the N-terminal FMN domain with the C-terminal FNR domain. NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD
Probab=99.94 E-value=8e-26 Score=177.74 Aligned_cols=175 Identities=18% Similarity=0.226 Sum_probs=137.7
Q ss_pred EEEEEEECCCC-----EEEEEEECCC-CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEECC-----CCC
Q ss_conf 89899847998-----6999980789-997389857880314586110556432056677760179996157-----676
Q gi|254780364|r 16 SVISVKHYTDR-----LFRFCITRPK-SFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDDKLEFCSIKVDK-----GFF 84 (224)
Q Consensus 16 ~V~~~~~~T~~-----~~~l~l~~p~-~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~~~~~~i~~~~~-----g~~ 84 (224)
T Consensus 2 ~l~~r~~~np~s~g~~~~~l~l~~~~~~~~~~aGDll~I~p~~--p~~pR~YSIAS~p~dg~v~L~Vr~~~~~~~~~Gvc 79 (245)
T cd06200 2 RLQARVLLNPGSQGAPLWRLRLTPPDAGAQWQAGDIAEIGPRH--PLPHREYSIASLPADGALELLVRQVRHADGGLGLG 79 (245)
T ss_pred CCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCC--CCCCCCEEEEECCCCCEEEEEEEEEECCCCCCEEE
T ss_conf 4430000598898885589997479999997888877851799--99875446615699997999999974589996664
Q ss_pred CCCCCCCC-CCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHH-HHHHHH
Q ss_conf 53100002-2222100168875335644676881799965868088999999865308863389999405864-543048
Q gi|254780364|r 85 TTYLQNIQ-PGDTILLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTCGRVA-ELQYGI 162 (224)
Q Consensus 85 s~~l~~~~-~gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~R~~~-dl~~~~ 162 (224)
T Consensus 80 S~~L~~~~~~Gd~v~~~i~~~~~F~lP~--~~~PvImIg~GTGIAPfrgfl~er~~~~-~~~~wLfFG~R~~~~D~ly~~ 156 (245)
T cd06200 80 SGWLTRHAPIGASVALRLRENPGFHLPD--DGRPLILIGNGTGLAGLRSHLRARARAG-RHRNWLLFGERQAAHDFFCRE 156 (245)
T ss_pred HHHHHCCCCCCCEEEEEECCCCCCCCCC--CCCCEEEEECCCCCHHHHHHHHHHHHCC-CCCCEEEEECCCCCCCHHHHH
T ss_conf 8786347889998999944598675899--9998899956857177899999999726-688389950458745424899
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf 889988753321012468759998105788776672168785
Q gi|254780364|r 163 DVMHEISQDEILKDLIGQKLKFYRTVTQEDYLYKGRITNHIL 204 (224)
Q Consensus 163 el~~l~~~~~~~~~~~~~~~~~~~~isre~~~~~GrIt~~i~ 204 (224)
T Consensus 157 el~~~~~~g~--------l~~l~~AfSRd~~-~k~YVQd~l~ 189 (245)
T cd06200 157 ELEAWQAAGH--------LARLDLAFSRDQA-QKRYVQDRLR 189 (245)
T ss_pred HHHHHHHCCC--------CCEEEEEECCCCC-CCCCHHHHHH
T ss_conf 9999997099--------7467789803699-9873465688