HHsearch alignment for GI: 254780364 and conserved domain: cd06212
>cd06212 monooxygenase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons. These flavoprotein monooxygenases use molecular oxygen as a substrate and require reduced FAD. One atom of oxygen is incorportated into the aromatic compond, while the other is used to form a molecule of water. In contrast dioxygenases add both atoms of oxygen to the substrate.
Probab=100.00 E-value=4.2e-40 Score=265.17 Aligned_cols=180 Identities=21% Similarity=0.341 Sum_probs=154.6
Q ss_pred EEEEEEEEEECCCCEEEEEEEC--CCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCC-CCEEEEEEECCCCCCCCCC
Q ss_conf 1178989984799869999807--899973898578803145861105564320566777-6017999615767653100
Q gi|254780364|r 13 YCESVISVKHYTDRLFRFCITR--PKSFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDD-KLEFCSIKVDKGFFTTYLQ 89 (224)
Q Consensus 13 ~~~~V~~~~~~T~~~~~l~l~~--p~~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~-~~~~~i~~~~~g~~s~~l~ 89 (224)
T Consensus 1 ~~a~V~~i~~~t~di~~~~l~~~~~~~~~f~~GQ~v~~~~~g~--~~~R~ySi~s~p~~~~~~~l~Vk~~~~G~~s~~l~ 78 (232)
T cd06212 1 FVGTVVAVEALTHDIRRLRLRLEEPEPIKFFAGQYVDITVPGT--EETRSFSMANTPADPGRLEFIIKKYPGGLFSSFLD 78 (232)
T ss_pred CEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEECCC--CCEEEEEECCCCCCCCEEEEEEEEECCCCHHHHHH
T ss_conf 9199999997589939999993999968718985599998998--81789974627999988999999977995588998
Q ss_pred C-CCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 0-022222100168875335644676881799965868088999999865308863389999405864543048889988
Q gi|254780364|r 90 N-IQPGDTILLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTCGRVAELQYGIDVMHEI 168 (224)
Q Consensus 90 ~-~~~gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~R~~~dl~~~~el~~l~ 168 (224)
T Consensus 79 ~~l~~Gd~v~v-~gP~G~f~l~~~-~~~~~vliAgG~GitP~~sml~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~ 156 (232)
T cd06212 79 DGLAVGDPVTV-TGPYGTCTLRES-RDRPIVLIGGGSGMAPLLSLLRDMAASGSDRPVRFFYGARTARDLFYLEEIAALG 156 (232)
T ss_pred HCCCCCCEEEE-ECCCCCCEECCC-CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 55899989999-737567510678-8987899956877025999999999749997489998448878878899999999
Q ss_pred HHHHHHCCCCCCCEEEEEEECCCC--CCC---CCCCHHHHH
Q ss_conf 753321012468759998105788--776---672168785
Q gi|254780364|r 169 SQDEILKDLIGQKLKFYRTVTQED--YLY---KGRITNHIL 204 (224)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~isre~--~~~---~GrIt~~i~ 204 (224)
T Consensus 157 ~~~~--------~~~~~~~~s~~~~~~~~~g~~g~i~~~l~ 189 (232)
T cd06212 157 EKIP--------DFTFIPALSESPDDEGWSGETGLVTEVVQ 189 (232)
T ss_pred HHCC--------CCEEEEEECCCCCCCCCCCCCCCHHHHHH
T ss_conf 8789--------92999998337866676664560889998