HHsearch alignment for GI: 254780364 and conserved domain: cd06221
>cd06221 sulfite_reductase_like Anaerobic sulfite reductase contains an FAD and NADPH binding module with structural similarity to ferredoxin reductase and sequence similarity to dihydroorotate dehydrogenases. Clostridium pasteurianum inducible dissimilatory type sulfite reductase is linked to ferredoxin and reduces NH2OH and SeO3 at a lesser rate than it's normal substate SO3(2-). Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+.
Probab=100.00 E-value=7.5e-37 Score=245.25 Aligned_cols=185 Identities=23% Similarity=0.348 Sum_probs=146.1
Q ss_pred EEEEEECCCCEEEEEEECCC----CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCC-CEEEEEEECCCCCCCCCCCC
Q ss_conf 98998479986999980789----99738985788031458611055643205667776-01799961576765310000
Q gi|254780364|r 17 VISVKHYTDRLFRFCITRPK----SFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDDK-LEFCSIKVDKGFFTTYLQNI 91 (224)
Q Consensus 17 V~~~~~~T~~~~~l~l~~p~----~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~~-~~~~i~~~~~g~~s~~l~~~ 91 (224)
T Consensus 1 v~~i~~et~~v~~~~l~~~~~~~~~~~f~pGQfv~l~v~~~~~---~p~Si~s~~~~~~~l~i~vk~~--G~~T~~L~~l 75 (253)
T cd06221 1 IVEVVDETEDIKTFTLRLEDDDEELFTFKPGQFVMLSLPGVGE---APISISSDPTRRGPLELTIRRV--GRVTEALHEL 75 (253)
T ss_pred CEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCE---EEEEEECCCCCCCEEEEEEEEE--CCCCHHHHCC
T ss_conf 9699977999699999947988778895989559999799998---9898744889999899999996--7865333238
Q ss_pred CCCCCCEECCCCCCC-CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC-CCCEEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 222221001688753-35644676881799965868088999999865308-8633899994058645430488899887
Q gi|254780364|r 92 QPGDTILLHKKSTGD-LILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYK-KFDEVIITHTCGRVAELQYGIDVMHEIS 169 (224)
Q Consensus 92 ~~gd~~~~~~~p~g~-f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~-~~~~i~l~~g~R~~~dl~~~~el~~l~~ 169 (224)
T Consensus 76 ~~Gd~l~v-~GP~G~~F~~~~~-~~~~~lliagG~GiaPl~s~~~~l~~~~~~~~~v~l~~g~r~~~~~~~~del~~l~~ 153 (253)
T cd06221 76 KPGDTVGL-RGPFGNGFPVEEM-KGKDLLLVAGGLGLAPLRSLINYILDNREDYGKVTLLYGARTPEDLLFKEELKEWAK 153 (253)
T ss_pred CCCCEEEE-ECCCCCCCCCCCC-CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCHHHHHHHHH
T ss_conf 99999999-7067887637646-897689995462566689999999972666775799996398798120999999871
Q ss_pred HHHHHCCCCCCCEEEEEEECCCCCCC---CCCCHHHHHCCC------HHHHCCCCCC
Q ss_conf 53321012468759998105788776---672168785860------6996787978
Q gi|254780364|r 170 QDEILKDLIGQKLKFYRTVTQEDYLY---KGRITNHILSGE------FYRNMGLSPL 217 (224)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~isre~~~~---~GrIt~~i~~g~------l~~~~~l~~~ 217 (224)
T Consensus 154 ~~---------~~~~~~~~~~~~~~~~G~~G~vt~~l~~~~~~~~~~~vy~CGP~pM 201 (253)
T cd06221 154 RS---------DVEVILTVDRAEEGWTGNVGLVTDLLPELTLDPDNTVAIVCGPPIM 201 (253)
T ss_pred CC---------CCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHH
T ss_conf 47---------9799999978987758766858899987377868859999399999