HHsearch alignment for GI: 254780364 and conserved domain: pfam08022

Probab=98.96  E-value=2.9e-09  Score=76.41  Aligned_cols=87  Identities=21%  Similarity=0.373  Sum_probs=64.1

Q ss_pred             EEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC----
Q ss_conf             8998479986999980789-99738985788031458611055643205667776017999615767653100002----
Q gi|254780364|r   18 ISVKHYTDRLFRFCITRPK-SFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDDKLEFCSIKVDKGFFTTYLQNIQ----   92 (224)
Q Consensus        18 ~~~~~~T~~~~~l~l~~p~-~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~~~~~~i~~~~~g~~s~~l~~~~----   92 (224)
T Consensus         7 A~v~~lp~~v~~l~i~rp~~~~~~~pGq~vyl~~p~is~~q~HPFTI~s~p~~~~l~~~i-k~~-gg~T~~L~~~~~~~~   84 (103)
T pfam08022         7 AKVSLLPDNVVELIVSKPKKPFKYKPGQYIFINFPPISFLQSHPFTITSAPEDDKLSVHI-KAK-GGWTKKLAKYLSSSP   84 (103)
T ss_pred             EEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCEEEEEE-EEC-CCHHHHHHHHHHHCC
T ss_conf             899997899699999889997889998399999796576534882303467699899999-969-987799999987451


Q ss_pred             CCC---CCEECCCCCCC
Q ss_conf             222---21001688753
Q gi|254780364|r   93 PGD---TILLHKKSTGD  106 (224)
Q Consensus        93 ~gd---~~~~~~~p~g~  106 (224)
T Consensus        85 ~~~~~~~~v~ieGPYG~  101 (103)
T pfam08022        85 ENNKDKPRVLIEGPYGP  101 (103)
T ss_pred             CCCCCCCEEEEECCCCC
T ss_conf             36887538999998789