HHsearch results for GI: 254780364 and protein with PDBid: 1f20_A

>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidoreductase; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=99.91  E-value=1e-23  Score=163.48  Aligned_cols=138  Identities=20%  Similarity=0.246  Sum_probs=107.6

Q ss_pred             EEEEEECCCCCCCCCE--EEEEE-----------ECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf             5564320566777601--79996-----------1576765310000222221001688753356446768817999658
Q gi|254780364|r   58 FRAYSIASPCRDDKLE--FCSIK-----------VDKGFFTTYLQNIQPGDTILLHKKSTGDLILDSLIPGNRLYLFSMG  124 (224)
Q Consensus        58 ~R~ySiaS~p~~~~~~--~~i~~-----------~~~g~~s~~l~~~~~gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgG  124 (224)
                      .|+|||||+|......  +.+..           ...|.+|++|+++++||.+.+..++++.|.+++. +.+++||||+|
T Consensus       210 pR~YSIaSsp~~~~~~~~l~v~v~~~~~~~~~~~~~~G~~S~~L~~l~~gd~i~v~~~~~~~F~lp~~-~~~piimIg~G  288 (435)
T 1f20_A          210 PRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADDVVPCFVRGAPSFHLPRN-PQVPCILVGPG  288 (435)
T ss_dssp             CEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCTTCEEEEEEECCTTSSCCSC-TTSCEEEECCG
T ss_pred             CCEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCC-CCCCEEEEECC
T ss_conf             64101057855579758999999987603788872500354020541589989999525777568887-76543999558


Q ss_pred             CCHHHHHHHHHHHHH-----CCCCCEEEEEEECCCHH-HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC
Q ss_conf             680889999998653-----08863389999405864-543048889988753321012468759998105788776672
Q gi|254780364|r  125 TGIAPFASMIRDPET-----YKKFDEVIITHTCGRVA-ELQYGIDVMHEISQDEILKDLIGQKLKFYRTVTQEDYLYKGR  198 (224)
Q Consensus       125 tGiaP~~silr~~~~-----~~~~~~i~l~~g~R~~~-dl~~~~el~~l~~~~~~~~~~~~~~~~~~~~isre~~~~~Gr  198 (224)
                      ||||||+||+++...     ....++++|+||+|+.+ |++|.+|+.++....        .+++++++.||++..++++
T Consensus       289 TGIAPfrsflq~r~~~~~~~~~~~~~~~L~fG~r~~~~d~ly~eel~~~~~~~--------~~~~~~~afSRd~~~~k~Y  360 (435)
T 1f20_A          289 TGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKG--------VFRELYTAYSREPDRPKKY  360 (435)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHCCCCCCEEEEEEESCTTTSCTTHHHHHHHHHTT--------SEEEEEEEESSCTTSCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC--------CCEEEEEEECCCCCCCCCC
T ss_conf             67227999999999876630567898699998245136678789999998469--------9769999975786899866


Q ss_pred             CHHHHH
Q ss_conf             168785
Q gi|254780364|r  199 ITNHIL  204 (224)
Q Consensus       199 It~~i~  204 (224)
                      |++.|.
T Consensus       361 VQd~l~  366 (435)
T 1f20_A          361 VQDVLQ  366 (435)
T ss_dssp             HHHHHH
T ss_pred             CCCHHH
T ss_conf             376887