HHsearch results for GI: 254780364 and protein with PDBid: 1umk_A

>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=100.00  E-value=7.7e-35  Score=231.61  Aligned_cols=190  Identities=19%  Similarity=0.261  Sum_probs=154.4

Q ss_pred             CHHCCCCCEEEEEEEEEECCCCEEEEEEECCCC---CCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEE--
Q ss_conf             322073421178989984799869999807899---973898578803145861105564320566777601799961--
Q gi|254780364|r    5 SSELAADVYCESVISVKHYTDRLFRFCITRPKS---FRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDDKLEFCSIKV--   79 (224)
Q Consensus         5 ~~~ip~~~~~~~V~~~~~~T~~~~~l~l~~p~~---~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~~~~~~i~~~--   79 (224)
                      ..+-|...|+++|++++.+|+++++|+|+.|++   +.|+||||+.|.++..|+..+|+||++|.|.++....+.+++  
T Consensus         9 ~~~~p~~~~~~~lv~~~~ls~dv~~~~f~~p~~~~~~~~~pGQ~v~l~~~~~g~~~~R~yS~~s~~~~~~~~~~~ik~~~   88 (275)
T 1umk_A            9 TLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYF   88 (275)
T ss_dssp             SCCCTTCCEEEEEEEEEECSSSEEEEEEECSSTTCBCCCCTTCEEEEEEEETTEEEEEEECCSSCTTCCSEEEEEEECCC
T ss_pred             CCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEEE
T ss_conf             33489966777999999958993999998399764568799617999836799087612300357889984999999850


Q ss_pred             -------CCCCCCC-CCCCCCCCCCCEECCCCCCCCCCCCC---------------CCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf             -------5767653-10000222221001688753356446---------------768817999658680889999998
Q gi|254780364|r   80 -------DKGFFTT-YLQNIQPGDTILLHKKSTGDLILDSL---------------IPGNRLYLFSMGTGIAPFASMIRD  136 (224)
Q Consensus        80 -------~~g~~s~-~l~~~~~gd~~~~~~~p~g~f~~~~~---------------~~~~~lvlIAgGtGiaP~~silr~  136 (224)
                             ..|+.++ ++..+++||.+.+ .+|.|.|.+...               ...++++|||||||||||+||+++
T Consensus        89 ~~~~~~~~~gg~~s~~l~~l~~Gd~v~i-~gp~G~f~~~~~~~~~~~~~~~~~~~~~~~~~iv~IagG~GItP~~s~l~~  167 (275)
T 1umk_A           89 KDTHPKFPAGGKMSQYLESMQIGDTIEF-RGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRA  167 (275)
T ss_dssp             SSSBTTBTTCCHHHHHHHHCCTTCEEEE-EEEECSEEEEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHHCCCCCEEEE-ECCCCCEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCEEHHHHHHHHHH
T ss_conf             4766314899625899972899998999-516342376478834555422456544578749999758015589999999


Q ss_pred             HHHCC-CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC---CCCCHHH
Q ss_conf             65308-863389999405864543048889988753321012468759998105788776---6721687
Q gi|254780364|r  137 PETYK-KFDEVIITHTCGRVAELQYGIDVMHEISQDEILKDLIGQKLKFYRTVTQEDYLY---KGRITNH  202 (224)
Q Consensus       137 ~~~~~-~~~~i~l~~g~R~~~dl~~~~el~~l~~~~~~~~~~~~~~~~~~~~isre~~~~---~GrIt~~  202 (224)
                      ++..+ ..++++|+||+|+.+|++|+++|.+|+++++       .||++++++++++..|   +|||++.
T Consensus       168 ll~~~~~~~~v~l~~~~r~~~d~~~~~~l~~l~~~~~-------~~~~~~~~~~~~~~~~~~~~g~i~~~  230 (275)
T 1umk_A          168 IMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHS-------ARFKLWYTLDRAPEAWDYGQGFVNEE  230 (275)
T ss_dssp             HHTCTTCCCEEEEEEEESSGGGCTTHHHHHHHHHHCT-------TTEEEEEEESSCCSSCSSEESSCCHH
T ss_pred             HHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCC-------CCEEEEEEECCCCCCCCCCCCCCCHH
T ss_conf             9977888745899850489899778999999998667-------73599998337876667753666999