HHsearch results for GI: 254780364 and protein with PDBid: 2qtl_A
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel beta barrel, flexible hinge region; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=99.90 E-value=6.2e-22 Score=152.59 Aligned_cols=138 Identities=21% Similarity=0.289 Sum_probs=103.1
Q ss_pred EEEEEECCCCCCC--CCEEEEEEE-----------CCCCCCCCCCCCC------------------CCCCCEECCCCCCC
Q ss_conf 5564320566777--601799961-----------5767653100002------------------22221001688753
Q gi|254780364|r 58 FRAYSIASPCRDD--KLEFCSIKV-----------DKGFFTTYLQNIQ------------------PGDTILLHKKSTGD 106 (224)
Q Consensus 58 ~R~ySiaS~p~~~--~~~~~i~~~-----------~~g~~s~~l~~~~------------------~gd~~~~~~~p~g~ 106 (224)
.|.|||||+|... .+.+.+..+ ..|.+|+||.++. .|+.+.+...+.|.
T Consensus 291 PR~YSISSSp~~~p~~i~ltv~vv~~~~~~~~~~~r~GvcS~~L~~l~~~~~~~~~~~~~~~~~~~~g~~v~v~vr~s~~ 370 (539)
T 2qtl_A 291 PRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSGKALAPKISIFPRTTNS 370 (539)
T ss_dssp CEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC--------------CCCEEEEEECSCCC
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
T ss_conf 75364126754589962377778997546899975165116287752120245543323444566769879998066888
Q ss_pred CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH------CCCCCEEEEEEECCCHH-HHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 356446768817999658680889999998653------08863389999405864-54304888998875332101246
Q gi|254780364|r 107 LILDSLIPGNRLYLFSMGTGIAPFASMIRDPET------YKKFDEVIITHTCGRVA-ELQYGIDVMHEISQDEILKDLIG 179 (224)
Q Consensus 107 f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~------~~~~~~i~l~~g~R~~~-dl~~~~el~~l~~~~~~~~~~~~ 179 (224)
|.+... +..++||||+|||||||+||+++... .+..++++|+||+|+.+ |.+|.+|++++.++..
T Consensus 371 F~lp~~-~~~piimIg~GTGIAPfrsflq~r~~~~~~~~~~~~g~~~lffG~r~~~~D~ly~~El~~~~~~g~------- 442 (539)
T 2qtl_A 371 FHLPDD-PSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRKELRHFLKHGI------- 442 (539)
T ss_dssp CCCCSS-TTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEESCTTTCCTTHHHHHHHHHTTS-------
T ss_pred CCCCCC-CCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC-------
T ss_conf 789888-887708994385516689999999999985204787875999970387312359999999997199-------
Q ss_pred CCEEEEEEECCCCC-----CCCCCCHHHHH
Q ss_conf 87599981057887-----76672168785
Q gi|254780364|r 180 QKLKFYRTVTQEDY-----LYKGRITNHIL 204 (224)
Q Consensus 180 ~~~~~~~~isre~~-----~~~GrIt~~i~ 204 (224)
+++++.+.||+.. ..+++|++.|.
T Consensus 443 -l~~l~~afSRd~~~~~~~~~k~YVQd~l~ 471 (539)
T 2qtl_A 443 -LTHLKVSFSRDAPVGEEEAPAKYVQDNIQ 471 (539)
T ss_dssp -SCEEEEEESSSCC------CCCSHHHHHH
T ss_pred -CCEEEEEEECCCCCCCCCCCCCCHHHHHH
T ss_conf -82899999475777765689521555899