HHsearch results for GI: 254780364 and protein with PDBid: 3jqq_A
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=100.00 E-value=1.1e-33 Score=224.55 Aligned_cols=187 Identities=15% Similarity=0.195 Sum_probs=148.7
Q ss_pred CCCEEEEEEEEEECCC-----CEEEEEEECCCCCCCCCCCEEEECCCCC-------------------------------
Q ss_conf 3421178989984799-----8699998078999738985788031458-------------------------------
Q gi|254780364|r 10 ADVYCESVISVKHYTD-----RLFRFCITRPKSFRFRSGEFVMLGLIVN------------------------------- 53 (224)
Q Consensus 10 ~~~~~~~V~~~~~~T~-----~~~~l~l~~p~~~~f~aGQ~~~l~~~~~------------------------------- 53 (224)
..-|.+||++++.+|+ +++.|.|..+.+++|+||||+.|.-+..
T Consensus 13 ~~p~~a~v~~~~~lt~~~~~~~~~~i~l~~~~~~~y~pGq~l~I~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (316)
T 3jqq_A 13 KNPLKCKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYNELDNNPNNQINKDHNIINTTNHTNHNNIALS 92 (316)
T ss_dssp SSCEEEEEEEEEECSCTTCSCCEEEEEEECTTCCCCCTTCEEEECTTCC-------------------------------
T ss_pred CCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCEECCCEEEEEECCCCCCCCCHHHHCCCHHHHHCCCCCCCCHHHHH
T ss_conf 99988899878994899998359999996899988815987899957975234800231451444320444466788886
Q ss_pred ---CCCEEEEEEECCCCCCCCCEEEEEEE------------CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC--CCCC
Q ss_conf ---61105564320566777601799961------------576765310000222221001688753356446--7688
Q gi|254780364|r 54 ---GRPIFRAYSIASPCRDDKLEFCSIKV------------DKGFFTTYLQNIQPGDTILLHKKSTGDLILDSL--IPGN 116 (224)
Q Consensus 54 ---g~~~~R~ySiaS~p~~~~~~~~i~~~------------~~g~~s~~l~~~~~gd~~~~~~~p~g~f~~~~~--~~~~ 116 (224)
++...|+|||||+|.++...+.++.+ ..|.+|++|+++++||.+.+. +|.|.|.+... .+.+
T Consensus 93 ~~~~~~~~R~YSIaS~p~~~~~~l~i~v~~~~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~i~-~P~G~f~~~~~~~~~~~ 171 (316)
T 3jqq_A 93 HIKKQRCARLYSISSSNNMENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKINDDIYLT-GAHGYFNLPNDAIQKNT 171 (316)
T ss_dssp ----CCCCEEEEBCSCTTSSSEEEEEECCBC---------CCBCHHHHHHHTCCTTCEEEEE-EEECCCCCCTTHHHHTC
T ss_pred HCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEHHHHHCCCCCCEEEEE-ECCCCCCCCCCHHCCCC
T ss_conf 40578886578817788889978999999972236888878681566567419997989999-42567746666000578
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHCCC----------CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 17999658680889999998653088----------63389999405864543048889988753321012468759998
Q gi|254780364|r 117 RLYLFSMGTGIAPFASMIRDPETYKK----------FDEVIITHTCGRVAELQYGIDVMHEISQDEILKDLIGQKLKFYR 186 (224)
Q Consensus 117 ~lvlIAgGtGiaP~~silr~~~~~~~----------~~~i~l~~g~R~~~dl~~~~el~~l~~~~~~~~~~~~~~~~~~~ 186 (224)
+++|||||||||||+||+++++..+. .++++|+||+|+.+|++|.+||.+|+++++ .++.++.
T Consensus 172 ~ivlIa~GtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~~i~L~~g~r~~~d~~~~~el~~l~~~~~-------~~~~~~~ 244 (316)
T 3jqq_A 172 NFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYFQKMYP-------NNINIHY 244 (316)
T ss_dssp CEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGCTTHHHHHHHHHHCT-------TTEEEEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC-------CCEEEEE
T ss_conf 889999257736599999999972720000125678852899984698799654999999998674-------7766999
Q ss_pred EECCC--CCCCCCCCHHHHH
Q ss_conf 10578--8776672168785
Q gi|254780364|r 187 TVTQE--DYLYKGRITNHIL 204 (224)
Q Consensus 187 ~isre--~~~~~GrIt~~i~ 204 (224)
+.+++ +...+|||++.+.
T Consensus 245 ~~s~~~~~~~~~~yVq~~i~ 264 (316)
T 3jqq_A 245 VFSYKQNSDATSFYVQDEIY 264 (316)
T ss_dssp EEGGGCC---CBCCHHHHHH
T ss_pred EECCCCCCCCCEEEECHHHH
T ss_conf 97657667886221161898