HHsearch results for GI: 254780364 and protein with PDBid: 3lo8_A

>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=100.00  E-value=1.4e-34  Score=230.01  Aligned_cols=193  Identities=19%  Similarity=0.265  Sum_probs=150.0

Q ss_pred             CCHHCCCC------CEEEEEEEEEECCC-----CEEEEEEECCCCCCCCCCCEEEECCCCC------CCCEEEEEEECCC
Q ss_conf             43220734------21178989984799-----8699998078999738985788031458------6110556432056
Q gi|254780364|r    4 VSSELAAD------VYCESVISVKHYTD-----RLFRFCITRPKSFRFRSGEFVMLGLIVN------GRPIFRAYSIASP   66 (224)
Q Consensus         4 ~~~~ip~~------~~~~~V~~~~~~T~-----~~~~l~l~~p~~~~f~aGQ~~~l~~~~~------g~~~~R~ySiaS~   66 (224)
                      .+.++|..      -|.++|++++++|+     +++.|.+..+..++|+||||+.|..|+.      +...+|+|||||+
T Consensus        14 ~~~~pp~~~~~~~~p~~a~v~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~~~v~~p~~~~~~~~~~~~~R~YSIaSs   93 (311)
T 3lo8_A           14 SAKEPPLNTYKPKEPFTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIAST   93 (311)
T ss_dssp             CCSSCCCCSBBTTBCEEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSC
T ss_pred             CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCC
T ss_conf             23579836558899747899978980478998539999986899987269988999758875001588898567570788


Q ss_pred             CCCCC-----CEEEEEEE-------------CCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CCCCCCCEEEEECCCCH
Q ss_conf             67776-----01799961-------------5767653100002222210016887533564-46768817999658680
Q gi|254780364|r   67 CRDDK-----LEFCSIKV-------------DKGFFTTYLQNIQPGDTILLHKKSTGDLILD-SLIPGNRLYLFSMGTGI  127 (224)
Q Consensus        67 p~~~~-----~~~~i~~~-------------~~g~~s~~l~~~~~gd~~~~~~~p~g~f~~~-~~~~~~~lvlIAgGtGi  127 (224)
                      |..+.     +.+.|+++             .+|.+|++|+++++||.+.+.+ |.|.|.+. ...+.+++|||||||||
T Consensus        94 p~~~~~~~~~~~~~Vr~v~~~~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~~~~-p~g~f~~~~~~~~~~~~vlIa~GtGI  172 (311)
T 3lo8_A           94 RYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKIQLTG-PSGKIMLLPEEDPNATHIMIATGTGV  172 (311)
T ss_dssp             TTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCTTCEEEEEE-EECCTTCCCCSCTTCEEEEEEEGGGG
T ss_pred             CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEE-CCCCCCCCCCCCCCCCEEEEECCCCH
T ss_conf             76789975389999999731235567789887986744675189999889971-35886236754689878999875047


Q ss_pred             HHHHHHHHHHHHCC-----CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC---CCCC
Q ss_conf             88999999865308-----863389999405864543048889988753321012468759998105788776---6721
Q gi|254780364|r  128 APFASMIRDPETYK-----KFDEVIITHTCGRVAELQYGIDVMHEISQDEILKDLIGQKLKFYRTVTQEDYLY---KGRI  199 (224)
Q Consensus       128 aP~~silr~~~~~~-----~~~~i~l~~g~R~~~dl~~~~el~~l~~~~~~~~~~~~~~~~~~~~isre~~~~---~GrI  199 (224)
                      |||+||+++++...     ..++++|+||+|+.+|++|.+|+.++.++++       +++.+..++++++..|   .|++
T Consensus       173 aP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~d~~~~~el~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v  245 (311)
T 3lo8_A          173 APFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYP-------DNFRYDKALSREQKNRSGGKMYV  245 (311)
T ss_dssp             HHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGGGCSSHHHHHHHHHHCT-------TTEEEEEEETTTC-------CCH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCC-------CCEEEEEEEECCCCCCCCCCCCC
T ss_conf             68999999999711000247974999983463244678999999998588-------97799999926887667864412


Q ss_pred             HHHHH
Q ss_conf             68785
Q gi|254780364|r  200 TNHIL  204 (224)
Q Consensus       200 t~~i~  204 (224)
                      ++.+.
T Consensus       246 ~~~~~  250 (311)
T 3lo8_A          246 QDKIE  250 (311)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             03689