HHsearch results for GI: 254780364 and protein with PDBid: 3lo8_A
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=100.00 E-value=1.4e-34 Score=230.01 Aligned_cols=193 Identities=19% Similarity=0.265 Sum_probs=150.0
Q ss_pred CCHHCCCC------CEEEEEEEEEECCC-----CEEEEEEECCCCCCCCCCCEEEECCCCC------CCCEEEEEEECCC
Q ss_conf 43220734------21178989984799-----8699998078999738985788031458------6110556432056
Q gi|254780364|r 4 VSSELAAD------VYCESVISVKHYTD-----RLFRFCITRPKSFRFRSGEFVMLGLIVN------GRPIFRAYSIASP 66 (224)
Q Consensus 4 ~~~~ip~~------~~~~~V~~~~~~T~-----~~~~l~l~~p~~~~f~aGQ~~~l~~~~~------g~~~~R~ySiaS~ 66 (224)
.+.++|.. -|.++|++++++|+ +++.|.+..+..++|+||||+.|..|+. +...+|+|||||+
T Consensus 14 ~~~~pp~~~~~~~~p~~a~v~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~~~v~~p~~~~~~~~~~~~~R~YSIaSs 93 (311)
T 3lo8_A 14 SAKEPPLNTYKPKEPFTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIAST 93 (311)
T ss_dssp CCSSCCCCSBBTTBCEEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSC
T ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCC
T ss_conf 23579836558899747899978980478998539999986899987269988999758875001588898567570788
Q ss_pred CCCCC-----CEEEEEEE-------------CCCCCCCCCCCCCCCCCCEECCCCCCCCCCC-CCCCCCCEEEEECCCCH
Q ss_conf 67776-----01799961-------------5767653100002222210016887533564-46768817999658680
Q gi|254780364|r 67 CRDDK-----LEFCSIKV-------------DKGFFTTYLQNIQPGDTILLHKKSTGDLILD-SLIPGNRLYLFSMGTGI 127 (224)
Q Consensus 67 p~~~~-----~~~~i~~~-------------~~g~~s~~l~~~~~gd~~~~~~~p~g~f~~~-~~~~~~~lvlIAgGtGi 127 (224)
|..+. +.+.|+++ .+|.+|++|+++++||.+.+.+ |.|.|.+. ...+.+++|||||||||
T Consensus 94 p~~~~~~~~~~~~~Vr~v~~~~~~~~~~~~~~~G~~S~~L~~l~~Gd~v~~~~-p~g~f~~~~~~~~~~~~vlIa~GtGI 172 (311)
T 3lo8_A 94 RYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKIQLTG-PSGKIMLLPEEDPNATHIMIATGTGV 172 (311)
T ss_dssp TTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCTTCEEEEEE-EECCTTCCCCSCTTCEEEEEEEGGGG
T ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEE-CCCCCCCCCCCCCCCCEEEEECCCCH
T ss_conf 76789975389999999731235567789887986744675189999889971-35886236754689878999875047
Q ss_pred HHHHHHHHHHHHCC-----CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC---CCCC
Q ss_conf 88999999865308-----863389999405864543048889988753321012468759998105788776---6721
Q gi|254780364|r 128 APFASMIRDPETYK-----KFDEVIITHTCGRVAELQYGIDVMHEISQDEILKDLIGQKLKFYRTVTQEDYLY---KGRI 199 (224)
Q Consensus 128 aP~~silr~~~~~~-----~~~~i~l~~g~R~~~dl~~~~el~~l~~~~~~~~~~~~~~~~~~~~isre~~~~---~GrI 199 (224)
|||+||+++++... ..++++|+||+|+.+|++|.+|+.++.++++ +++.+..++++++..| .|++
T Consensus 173 aP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~d~~~~~el~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v 245 (311)
T 3lo8_A 173 APFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYP-------DNFRYDKALSREQKNRSGGKMYV 245 (311)
T ss_dssp HHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGGGCSSHHHHHHHHHHCT-------TTEEEEEEETTTC-------CCH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCC-------CCEEEEEEEECCCCCCCCCCCCC
T ss_conf 68999999999711000247974999983463244678999999998588-------97799999926887667864412
Q ss_pred HHHHH
Q ss_conf 68785
Q gi|254780364|r 200 TNHIL 204 (224)
Q Consensus 200 t~~i~ 204 (224)
++.+.
T Consensus 246 ~~~~~ 250 (311)
T 3lo8_A 246 QDKIE 250 (311)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 03689