HHsearch alignment for GI: 254780365 and conserved domain: COG1213
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane].
Probab=99.91 E-value=5.8e-24 Score=167.37 Aligned_cols=224 Identities=22% Similarity=0.328 Sum_probs=135.0
Q ss_pred CCCCCCCCEEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEC-CCCCCCCHHHCCCCHHHHH
Q ss_conf 978885458999568888334324408883335688362799999999978998899981-3554441010011745444
Q gi|254780365|r 1 MGSLKKVRKAVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEAGLTDFVFVT-GRGKGLIKDYFDIQFELEQ 79 (299)
Q Consensus 1 ~~~m~~i~KavIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~Gi~~i~iv~-~~~k~~I~~~f~~~~~~~~ 79 (299)
T Consensus 1 ~~~~----kavILAAG~GsRlg~---~~PK~Lvev~gr~ii~~~i~~L~~~gi~e~vvV~~g~~~~lve~~l-------- 65 (239)
T COG1213 1 MHPM----KAVILAAGFGSRLGP---DIPKALVEVGGREIIYRTIENLAKAGITEFVVVTNGYRADLVEEFL-------- 65 (239)
T ss_pred CCCE----EEEEEECCCCCCCCC---CCCCHHHHCCCEEEHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH--------
T ss_conf 9740----478770344553479---9971443158867389999999876986399996230278999998--------
Q ss_pred HHHHCCCCEEECCCCCCCCCCCEEEECCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 565418700001134411248579984333--423346654211011223333111278644454433221122212234
Q gi|254780365|r 80 SLRKRNKKAELTLLAESIPSIGNAVFTWQY--ERKGLGHAVWCARNIIGDNPFALLLPDMIMSPLEGENCMANMIKLYEK 157 (299)
Q Consensus 80 ~l~~~~~~~~~~~~~~~~~~~~~i~~v~Q~--~p~Gtg~Ai~~a~~~i~de~flv~~gD~i~~~~~~~~~l~~li~~~~~ 157 (299)
T Consensus 66 --~~~-------------~~--~~~iv~N~~y~ktN~~~Sl~~akd~~~~~-fii~~sD~vye~~----~~e~l~~a--- 120 (239)
T COG1213 66 --KKY-------------PF--NAKIVINSDYEKTNTGYSLLLAKDYMDGR-FILVMSDHVYEPS----ILERLLEA--- 120 (239)
T ss_pred --HCC-------------CC--CEEEEECCCCCCCCCEEEEEEEHHHHCCC-EEEEECCEEECHH----HHHHHHHC---
T ss_conf --518-------------96--16999689855577646774543463385-7999578750689----99999847---
Q ss_pred CCCCEEEEEECCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCEEECHHHEECHHHHHHHCCCCCCCCCCCCC
Q ss_conf 32200112432854433133100133333353000000257788867342330202002723311000122666767500
Q gi|254780365|r 158 EGANILAVSECDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISNFFINGRYILHPDIFSILNDWKENEGKGEIQ 237 (299)
Q Consensus 158 ~~~~vi~~~~v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Snl~~~GiYi~~~~i~~~L~~~~~~~~~gE~~ 237 (299)
T Consensus 121 ~~~~li~d~~~------~~~~~~ea~kv~~e~G~i~~ig-K~l~e~---~~e~iGi~~l~~~i~~~~~~~~~e--~~~~~ 188 (239)
T COG1213 121 PGEGLIVDRRP------RYVGVEEATKVKDEGGRIVEIG-KDLTEY---DGEDIGIFILSDSIFEDTYELLVE--RSEYD 188 (239)
T ss_pred CCCCEEEECCC------CCCCCCCEEEEEECCCEEEHHC-CCCCCC---CCEEEEEEEECHHHHHHHHHHHHH--HHHHH
T ss_conf 57767895233------3355675069984497876210-785513---621653588345787878988765--56677
Q ss_pred HHHHHHHHH-HCCCEEEEEEEE-EEEECCCHHHHHHHHHHHH
Q ss_conf 378999998-319848999813-7864399889999999986
Q gi|254780365|r 238 LTDSMRKLS-ERHDFLAYHFKG-HTYDCGSKKGFVLANIAFA 277 (299)
Q Consensus 238 ltD~i~~l~-~~~~v~a~~~~g-~w~DiG~~~~yl~A~~~~a 277 (299)
T Consensus 189 ~~~~~~~~~~~~~~~di~-~~g~~w~EVDtpeDl~~ar~~~~ 229 (239)
T COG1213 189 YREVEKEAGLPFTEVDIH-VDGLFWMEVDTPEDLERARKYLV 229 (239)
T ss_pred HHHHHHHHCCCEEEEECC-CCCCEEEECCCHHHHHHHHHHHH
T ss_conf 999999858761785102-36852486388899999999999