HHsearch alignment for GI: 254780365 and conserved domain: PRK13368

>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional.
Probab=99.28  E-value=4.2e-11  Score=88.24  Aligned_cols=224  Identities=16%  Similarity=0.148  Sum_probs=132.0

Q ss_pred             CCCCCEEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHC-CCCEEEEECCCCCCCCHHHCCCCHHHHHHHH
Q ss_conf             885458999568888334324408883335688362799999999978-9988999813554441010011745444565
Q gi|254780365|r    4 LKKVRKAVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEA-GLTDFVFVTGRGKGLIKDYFDIQFELEQSLR   82 (299)
Q Consensus         4 m~~i~KavIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~-Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~   82 (299)
T Consensus         1 Mk--~~~iIPAR~~S~R~p------~K~L~~i~g~pmi~~v~~~a~~s~~~d~v~VaTdd~--eI~~~----------~k   60 (238)
T PRK13368          1 MK--VVVVIPARYGSSRLP------GKPLLDILGKPMIQHVYERAAQAAGVEEVYVATDDQ--RIEDA----------VE   60 (238)
T ss_pred             CC--EEEEECCCCCCCCCC------CCCCHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCH--HHHHH----------HH
T ss_conf             97--899984687787899------870125289699999999998468988299956842--48777----------50


Q ss_pred             HCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf             418700001134411248579984333423346654211011223333111278644454433221122212234322-0
Q gi|254780365|r   83 KRNKKAELTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNIIGDNPFALLLPDMIMSPLEGENCMANMIKLYEKEGA-N  161 (299)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~~~i~de~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~-~  161 (299)
T Consensus        61 ~---------------~g~~~i~ts~~~~~GTd-Ri~Ea~~~~~~d~ivnvQgDePli~p---~~I~~~i~~~~~~~~~~  121 (238)
T PRK13368         61 A---------------FGGKVVMTSDDHLSGTD-RLAEVMLKIEADIYINVQGDEPLIRP---RDIDTLIQPMLDDPSIN  121 (238)
T ss_pred             C---------------CCCEEEECCCCCCCCHH-HHHHHHHHCCCCEEEEECCCCCCCCH---HHHHHHHHHHHHCCCCE
T ss_conf             0---------------46327851565577147-89999851598789995388677899---99999999998377652


Q ss_pred             E-EEEEECC-HHHCCCCCCEECCCCCCCCCCEEEEECCCC--CCCC-CCCC-EEECHHHEECHHHHHHHCCCCCCCCCCC
Q ss_conf             0-1124328-544331331001333333530000002577--8886-7342-3302020027233110001226667675
Q gi|254780365|r  162 I-LAVSECD-PQLSCKYGMVQVGKAIDHQVFHISDMIEKP--DSST-FISN-FFINGRYILHPDIFSILNDWKENEGKGE  235 (299)
Q Consensus       162 v-i~~~~v~-~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP--~~~~-~~Sn-l~~~GiYi~~~~i~~~L~~~~~~~~~gE  235 (299)
T Consensus       122 v~t~~~~~~~~~~~~n~n~vKvv~---~~~~~~lyfSR~~ip~~~~~~~~~~~khiGiy~f~~~~L~~f~~l~~s----~  194 (238)
T PRK13368        122 VATLCAPISTEEEFESPNVVKVVV---DKNGDALYFSRSPIPSRRDGESARYLKHVGIYAFRRDVLQQFSQLPET----P  194 (238)
T ss_pred             EEEEEECCCCHHHHCCCCCEEEEE---CCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEECHHHHHHHHHCCCC----H
T ss_conf             767874168888843898529998---997870114525675112454201220301122119999998708998----5


Q ss_pred             CCHHHHHHHH--HHCC-CEEEEEEEEEEEECCCHHHHHHHH
Q ss_conf             0037899999--8319-848999813786439988999999
Q gi|254780365|r  236 IQLTDSMRKL--SERH-DFLAYHFKGHTYDCGSKKGFVLAN  273 (299)
Q Consensus       236 ~~ltD~i~~l--~~~~-~v~a~~~~g~w~DiG~~~~yl~A~  273 (299)
T Consensus       195 lE~~E~lEqLR~leng~~I~~~~~~~~~~~VDt~eDl~~v~  235 (238)
T PRK13368        195 LEQIESLEQLRALEHGYKIRMVEVEATSIGVDTPEDLERVR  235 (238)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHH
T ss_conf             67777089999998699267999599999987999999999