>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 The bacterial ispD protein catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate.; GO: 0008299 isoprenoid biosynthetic process.

Probab=99.01 E-value=4.3e-10 Score=82.00 Aligned_cols=209 Identities=20% Similarity=0.323 Sum_probs=117.6 Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHC-CCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCCCE Q ss_conf 999568888334324408883335688362799999999978-9988999813554441010011745444565418700 Q gi|254780365|r 10 AVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEA-GLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNKKA 88 (299) Q Consensus 10 avIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~-Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~~~ 88 (299) T Consensus 2 avi~AAG~G~R~~---~~~pKQy~~l~G~Pll~h~~~~~~~~~~~~~vvVV~~~~~~---~~~~------~~~~~~~~-- 67 (226) T TIGR00453 2 AVIPAAGRGTRMG---SGVPKQYLELAGRPLLEHTLDAFLAHPAIDEVVVVVSPDDT---EFFQ------KALAARAK-- 67 (226) T ss_pred EEEEECCCCEECC---CCCCEEEEEECCEEEHHHHHHHHHHHHCCCEEEEEECCCCH---HHHH------HHHCCCCC-- T ss_conf 6873167111336---79870266518802217789998632320646898367415---8888------86325657-- Q ss_pred EECCCCCCCCCCCEEEECCCCCCCC-C-CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCE Q ss_conf 0011344112485799843334233-4-66542110112---23333111278644454433221122212234-32200 Q gi|254780365|r 89 ELTLLAESIPSIGNAVFTWQYERKG-L-GHAVWCARNII---GDNPFALLLPDMIMSPLEGENCMANMIKLYEK-EGANI 162 (299) Q Consensus 89 ~~~~~~~~~~~~~~i~~v~Q~~p~G-t-g~Ai~~a~~~i---~de~flv~~gD~i~~~~~~~~~l~~li~~~~~-~~~~v 162 (299) T Consensus 68 ----------~-~~~~~v~----GG~~Rq~SV~~GL~a~~~~~~~~~VlvH-Da-ARPf~~~~~~~~l~~~~~~~~~a~~ 130 (226) T TIGR00453 68 ----------F-KVVKIVA----GGDTRQDSVRNGLKALPERADAEIVLVH-DA-ARPFVPKELIDRLLEALEKGAGAAI 130 (226) T ss_pred ----------C-CCCEEEC----CCCCHHHHHHHHHHHHHHCCCCCEEEEE-CC-CCCCCCHHHHHHHHHHHHHCCCCEE T ss_conf ----------8-6115846----9874689999999987635898828984-77-3458898799999999860798348 Q ss_pred EEEEECCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCEEECHHH-EECHHHHH--HHCCCCCC-CCCCCCCH Q ss_conf 1124328544331331001333333530000002577888673423302020-02723311--00012266-67675003 Q gi|254780365|r 163 LAVSECDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISNFFINGRY-ILHPDIFS--ILNDWKEN-EGKGEIQL 238 (299) Q Consensus 163 i~~~~v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Snl~~~GiY-i~~~~i~~--~L~~~~~~-~~~gE~~l 238 (299) T Consensus 131 ~A~-Pv~D-Tl-----K~~~-----~~G~~~~T~---dR~---------~Lw~~QTPQ~F~~~~L~~Ah~~~A~~~g~~~ 186 (226) T TIGR00453 131 LAL-PVAD-TL-----KRVD-----ADGFVVETV---DRE---------GLWAAQTPQAFRRELLLKAHARAAKAEGFEI 186 (226) T ss_pred EEE-ECCC-EE-----EEEC-----CCCCEECCC---CCC---------CCCEEECCCCCCHHHHHHHHHHHHHHCCCCC T ss_conf 742-0543-15-----7744-----888620266---621---------4525576887688899999999998469851 Q ss_pred HHHHHHHHHC-C-CEEEEEEEEEEEECCCHHHHHHHH Q ss_conf 7899999831-9-848999813786439988999999 Q gi|254780365|r 239 TDSMRKLSER-H-DFLAYHFKGHTYDCGSKKGFVLAN 273 (299) Q Consensus 239 tD~i~~l~~~-~-~v~a~~~~g~w~DiG~~~~yl~A~ 273 (299) T Consensus 187 TDDA~~~E~~~G~~v~LVeG~~~n~KiT~P~DL~~Ae 223 (226) T TIGR00453 187 TDDASAVERLFGGKVALVEGDADNFKITTPEDLALAE 223 (226) T ss_pred CCHHHHHHHHCCCCEEEEECCCCCEECCCHHHHHHHH T ss_conf 3589999996389728872761011036727899987

HHsearch alignment for GI: 254780365 and conserved domain: TIGR00453