HHsearch alignment for GI: 254780365 and conserved domain: TIGR01479
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; InterPro: IPR006375 This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (5.3.1.8 from EC) (PMI) and mannose-1-phosphate guanylyltransferase (2.7.7.22 from EC) in Pseudomonas aeruginosa, Xanthomonas campestris, and Acetobacter xylinus. The literature on the enzyme from Escherichia coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain lies at the C-terminal. ; GO: 0008928 mannose-1-phosphate guanylyltransferase (GDP) activity, 0009103 lipopolysaccharide biosynthetic process.
Probab=99.03 E-value=1.1e-10 Score=85.70 Aligned_cols=239 Identities=17% Similarity=0.302 Sum_probs=139.1
Q ss_pred EEEECCCCCCCCCHHHCC-CCCCEEEECC-E-EHHHHHHHHHHHC-CCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCC
Q ss_conf 999568888334324408-8833356883-6-2799999999978-9988999813554441010011745444565418
Q gi|254780365|r 10 AVFPIAGLGMRFFPISKV-IPKEMLAIVD-R-PVIQYVIEEALEA-GLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRN 85 (299)
Q Consensus 10 avIlAaG~GtRl~P~T~~-~pKpllpi~~-k-piI~~~i~~l~~~-Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~ 85 (299)
T Consensus 3 p~~~~gg~g~~lwp~~~~~~p~~f~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~n~~~~---------f~~~~~~~~~~ 73 (478)
T TIGR01479 3 PVILAGGSGTRLWPLSRELYPKQFLALVGDLYTLLQETLKRLAGLPDCSSPLVICNEEHR---------FLVAEQLRELG 73 (478)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHH---------HHHHHHHHHHC
T ss_conf 226407877501212112200344320452046789999862266422365255242034---------68888898606
Q ss_pred CCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC-----CCCCCCCC-CCCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 7000011344112485799843334233466542110-----11223333-11127864445443-32211222122343
Q gi|254780365|r 86 KKAELTLLAESIPSIGNAVFTWQYERKGLGHAVWCAR-----NIIGDNPF-ALLLPDMIMSPLEG-ENCMANMIKLYEKE 158 (299)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~-----~~i~de~f-lv~~gD~i~~~~~~-~~~l~~li~~~~~~ 158 (299)
T Consensus 74 ~~~--------------~~~~l~p~g~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~~~~~~~~~~~~~g 139 (478)
T TIGR01479 74 LLA--------------SNILLEPVGRNTAPAIALAALLALRRAPGEDPLLLVLAADHVITDEDAFRAAVKLALPAAAEG 139 (478)
T ss_pred CCC--------------CCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 522--------------221430266641578999999876405787747898615511100367899987643243317
Q ss_pred CCCEEEEEECCHHHCCCCCCEECC--CCCCC-----CCCEEEEECCCCCCCCCCCC------EEECHHHEECHHHH-HHH
Q ss_conf 220011243285443313310013--33333-----53000000257788867342------33020200272331-100
Q gi|254780365|r 159 GANILAVSECDPQLSCKYGMVQVG--KAIDH-----QVFHISDMIEKPDSSTFISN------FFINGRYILHPDIF-SIL 224 (299)
Q Consensus 159 ~~~vi~~~~v~~~~~~~yGvi~~~--~~~~~-----~~~~I~~~vEKP~~~~~~Sn------l~~~GiYi~~~~i~-~~L 224 (299)
T Consensus 140 ~~~~fg~~p~~p~--~gygy~~~g~~~~~~~~~~~~~~~~~~~f~~~p~~~~~~~~~~~g~~~wn~g~f~~~~~~~~~~l 217 (478)
T TIGR01479 140 KLVTFGIVPTTPE--TGYGYIRRGLDAPLAGGDDGDDVYAVERFVEKPDLATAQEYLESGDYYWNSGMFLFRASRYLAEL 217 (478)
T ss_pred CEEEEECCCCCCC--CCCCHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCCEEHHHHHHHHHH
T ss_conf 5478502357765--45311101443102442112214666665405455678999751762001430000135789988
Q ss_pred CCCCC------------CCCCCC--------CCH--HHHHHHHH-HC-CCEEEEEEEEEEEECCCHHHHHHHH
Q ss_conf 01226------------667675--------003--78999998-31-9848999813786439988999999
Q gi|254780365|r 225 NDWKE------------NEGKGE--------IQL--TDSMRKLS-ER-HDFLAYHFKGHTYDCGSKKGFVLAN 273 (299)
Q Consensus 225 ~~~~~------------~~~~gE--------~~l--tD~i~~l~-~~-~~v~a~~~~g~w~DiG~~~~yl~A~ 273 (299)
T Consensus 218 ~~~~p~~~~~~~~~~~~~~~d~~~~~~~~~~f~~~p~~~~d~~~~~~~~~~~~~p~~~~w~d~g~w~~~w~~~ 290 (478)
T TIGR01479 218 KKHAPDIYDACEAALEASEPDLDFIRLDKEAFEACPSESIDYAVMEKTSDAVVVPLDAGWSDVGSWSALWEIS 290 (478)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHC
T ss_conf 7630588999999874102342010004578740621000023222145706872356654334313443200