HHsearch alignment for GI: 254780365 and conserved domain: TIGR03310
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=99.61 E-value=1.1e-15 Score=116.35 Aligned_cols=179 Identities=15% Similarity=0.242 Sum_probs=114.5
Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCCCEE
Q ss_conf 99956888833432440888333568836279999999997899889998135544410100117454445654187000
Q gi|254780365|r 10 AVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEAGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNKKAE 89 (299)
Q Consensus 10 avIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~~~~ 89 (299)
T Consensus 2 AIILAaG~S~Rm-----G~~K~Ll~~~g~~ll~~~i~~~~~~~~~~vivv~~~~~~~~~~~~~~---------------- 60 (188)
T TIGR03310 2 AIILAAGLSSRM-----GQNKLLLPYKGKTILEHVVDNALRLFFDEVILVLGHEADELVALLAN---------------- 60 (188)
T ss_pred EEEECCCCCCCC-----CCCCCCCEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCC----------------
T ss_conf 699889876659-----88900688898329999999998569996699827837899998626----------------
Q ss_pred ECCCCCCCCCCCEEEECCCCC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 011344112485799843334-2334665421101122-33331112786444544332211222122343220011243
Q gi|254780365|r 90 LTLLAESIPSIGNAVFTWQYE-RKGLGHAVWCARNIIG-DNPFALLLPDMIMSPLEGENCMANMIKLYEKEGANILAVSE 167 (299)
Q Consensus 90 ~~~~~~~~~~~~~i~~v~Q~~-p~Gtg~Ai~~a~~~i~-de~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~~vi~~~~ 167 (299)
T Consensus 61 --------~~~--~~~v~n~~~~~G~~~si~~gl~~~~~~~~~li~~~D~P~l---~~~~i~~L~~~~~~~~~~iv~p-- 125 (188)
T TIGR03310 61 --------HSN--ITLVHNPQYAEGQSSSIKLGLELPVQSDGYLFLLGDQPFV---TPDIIQLLLEAFALKNDEIVVP-- 125 (188)
T ss_pred --------CCC--CCEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCC---CHHHHHHHHHHHHHCCCCCEEE--
T ss_conf --------689--6265486556780899999997065788599971887889---9999999999998579961734--
Q ss_pred CCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCEEECHHHEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 28544331331001333333530000002577888673423302020027233110001226667675003789999983
Q gi|254780365|r 168 CDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISNFFINGRYILHPDIFSILNDWKENEGKGEIQLTDSMRKLSE 247 (299)
Q Consensus 168 v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Snl~~~GiYi~~~~i~~~L~~~~~~~~~gE~~ltD~i~~l~~ 247 (299)
T Consensus 126 -------~~~-------------------g~~g~Pv-----------lf~~~~~~~L~~l~gd--~G-------~r~ll~ 159 (188)
T TIGR03310 126 -------LYK-------------------GKRGHPV-----------LFPRKLFPELLALTGD--TG-------GRQILR 159 (188)
T ss_pred -------CCC-------------------CCCCCCE-----------EECHHHHHHHHHCCCC--CC-------HHHHHH
T ss_conf -------559-------------------9536766-----------8779999999844388--03-------899998
Q ss_pred CC--CEEEEEEE--EEEEECCCHHHHH
Q ss_conf 19--84899981--3786439988999
Q gi|254780365|r 248 RH--DFLAYHFK--GHTYDCGSKKGFV 270 (299)
Q Consensus 248 ~~--~v~a~~~~--g~w~DiG~~~~yl 270 (299)
T Consensus 160 ~~~~~~~~v~~~d~~~~~DiDTpeD~~ 186 (188)
T TIGR03310 160 ELPHEVKYVEVKDPGILFDIDTPEDYQ 186 (188)
T ss_pred HCCCCEEEEECCCCCCCCCCCCHHHHH
T ss_conf 480676999728989041899999996