HHsearch alignment for GI: 254780365 and conserved domain: cd02508

>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch. ADP-glucose pyrophosphorylase (glucose-1-phosphate adenylyltransferase) catalyzes a very important step in the biosynthesis of alpha 1,4-glucans (glycogen or starch) in bacteria and plants: synthesis of the activated glucosyl donor, ADP-glucose, from glucose-1-phosphate and ATP. ADP-glucose pyrophosphorylase is a tetrameric allosterically regulated enzyme. While a homotetramer in bacteria, in plant chloroplasts and amyloplasts, it is a heterotetramer of two different, yet evolutionary related, subunits. There are a number of conserved regions in the sequence of bacterial and plant ADP-glucose pyrophosphorylase subunits. It is a subfamily of a very diverse glycosy transferase family 2.
Probab=100.00  E-value=1.8e-40  Score=268.95  Aligned_cols=195  Identities=20%  Similarity=0.253  Sum_probs=152.1

Q ss_pred             EEEECCCCCCCCCHHHCCCCCCEEEECCE-EHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCCCE
Q ss_conf             99956888833432440888333568836-27999999999789988999813554441010011745444565418700
Q gi|254780365|r   10 AVFPIAGLGMRFFPISKVIPKEMLAIVDR-PVIQYVIEEALEAGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNKKA   88 (299)
Q Consensus        10 avIlAaG~GtRl~P~T~~~pKpllpi~~k-piI~~~i~~l~~~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~~~   88 (299)
T Consensus         1 AvIlagG~GtRL~pLT~~~PKp~lpi~gk~~iId~~l~~l~~~Gi~~i~i~~~y~~~~i~~hl~~g~~~~~----~~~~~   76 (200)
T cd02508           1 AIILAGGEGTRLSPLTKKRAKPAVPFGGRYRLIDFPLSNMVNSGIRNVGVLTQYKSRSLNDHLGSGKEWDL----DRKNG   76 (200)
T ss_pred             CEEECCCCCCCCHHHHCCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCC----CCCCC
T ss_conf             98957888863625447997413088991620799999887679767998345358999999856401257----65668


Q ss_pred             EECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             001134411248579984333423346654211011223---33311127864445443322112221223432200112
Q gi|254780365|r   89 ELTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNIIGD---NPFALLLPDMIMSPLEGENCMANMIKLYEKEGANILAV  165 (299)
Q Consensus        89 ~~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~~~i~d---e~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~~vi~~  165 (299)
T Consensus        77 gi~i~----~---~~~~~~~~~~~Gt~~~i~~~~~~l~~~~~~~~lv~ngD~l~~~D-----~~~~l~~H~~~~a~~Ti~  144 (200)
T cd02508          77 GLFIL----P---PQQRKGGDWYRGTADAIYQNLDYIERSDPEYVLILSGDHIYNMD-----YREMLDFHIESGADITVV  144 (200)
T ss_pred             CEEEE----E---CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEECC-----HHHHHHHHHHCCCCEEEE
T ss_conf             58996----3---13336876553478999999998721788729997699787069-----999999998769998999


Q ss_pred             EECCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCEEECHHHEECHHHH-HHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             43285443313310013333335300000025778886734233020200272331-10001226667675003789999
Q gi|254780365|r  166 SECDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISNFFINGRYILHPDIF-SILNDWKENEGKGEIQLTDSMRK  244 (299)
Q Consensus       166 ~~v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Snl~~~GiYi~~~~i~-~~L~~~~~~~~~gE~~ltD~i~~  244 (299)
T Consensus       145 ~-----------------------------------------~in~GiYi~~~~~l~~~l~~~~~~~-~-~d~~~d~ip~  181 (200)
T cd02508         145 Y-----------------------------------------KASMGIYIFSKDLLIELLEEDAADG-S-HDFGKDIIPA  181 (200)
T ss_pred             E-----------------------------------------EEECEEEEEEHHHHHHHHHHHCCCC-C-CCCHHHHHHH
T ss_conf             9-----------------------------------------8504899980899999998632467-6-7558999999


Q ss_pred             HHHCCCEEEEEEEEEEEEC
Q ss_conf             9831984899981378643
Q gi|254780365|r  245 LSERHDFLAYHFKGHTYDC  263 (299)
Q Consensus       245 l~~~~~v~a~~~~g~w~Di  263 (299)
T Consensus       182 l~~~~~v~~y~~~gyw~DI  200 (200)
T cd02508         182 MLKKLKIYAYEFNGYWADI  200 (200)
T ss_pred             HHHCCCEEEEECCCEEECC
T ss_conf             9603988999668857494