HHsearch alignment for GI: 254780365 and conserved domain: cd02518
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat. Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.
Probab=98.08 E-value=3.4e-06 Score=58.03 Aligned_cols=117 Identities=15% Similarity=0.181 Sum_probs=73.4
Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHC-CCCEEEEECCCCC--CCCHHHCCCCHHHHHHHHHCCC
Q ss_conf 999568888334324408883335688362799999999978-9988999813554--4410100117454445654187
Q gi|254780365|r 10 AVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEA-GLTDFVFVTGRGK--GLIKDYFDIQFELEQSLRKRNK 86 (299)
Q Consensus 10 avIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~-Gi~~i~iv~~~~k--~~I~~~f~~~~~~~~~l~~~~~ 86 (299)
T Consensus 2 ~iI~aR~~S~RLp------~K~L~~i~~~~~i~~~i~r~k~~~~~~~IivaTs~~~~Dd~l~~~----------~~~--- 62 (233)
T cd02518 2 AIIQARMGSTRLP------GKVLKPLGGKPLLEHLLDRLKRSKLIDEIVIATSTNEEDDPLEAL----------AKK--- 62 (233)
T ss_pred EEEECCCCCCCCC------CCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH----------HHH---
T ss_conf 8996077883789------860023099579999999999668988499981786522699999----------974---
Q ss_pred CEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 00001134411248579984333423346654211011223333111278644454433221122212234322001
Q gi|254780365|r 87 KAELTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNIIGDNPFALLLPDMIMSPLEGENCMANMIKLYEKEGANIL 163 (299)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~~~i~de~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~~vi 163 (299)
T Consensus 63 --------------~~i~~frGs~~dvl~-R~~~a~~~~~~d~ivri~gD~P~idp---~~id~~i~~~~~~~~Dyv 121 (233)
T cd02518 63 --------------LGVKVFRGSEEDVLG-RYYQAAEEYNADVVVRITGDCPLIDP---EIIDAVIRLFLKSGADYT 121 (233)
T ss_pred --------------CCEEEEECCCCHHHH-HHHHHHHHCCCCEEEEECCCCCCCCH---HHHHHHHHHHHCCCCCEE
T ss_conf --------------848999578305889-99999871578889997687775898---999999999850799989