HHsearch alignment for GI: 254780367 and conserved domain: COG1295

>COG1295 Rbn Ribonuclease BN family enzyme [Replication, recombination, and repair].
Probab=100.00  E-value=0  Score=327.73  Aligned_cols=278  Identities=30%  Similarity=0.482  Sum_probs=245.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             27899999999999999855787688999999999999999999999863175-67899999999973374136899999
Q gi|254780367|r    3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDE   81 (281)
Q Consensus         3 ~~~~~~~~~i~~~~~~~~~~~~~~~Aaalaf~~llsl~Plli~~~~i~~~~~~-~~~~~~~~~~i~~~lp~~~~~~i~~~   81 (281)
T Consensus        11 ~~~~~~~~~~~~~~~r~~~d~~~~~aa~layy~lLSl~P~Llv~~sl~~~~~~~~~~~~~~~~~i~~~~P~~~~~~i~~~   90 (303)
T COG1295          11 ILRRGILDLLRRALERFNEDDGSLLAAALAYYTLLSLFPLLLVVFSLLGFFLAHPILLEDLLFIIANLLPEQAADVIEDY   90 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf             87888999999999997344365599999999999999999999999999756833688999999863987789999999


Q ss_pred             HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99852045741499999999999999999999999863023666303676799999999999999999999999999999
Q gi|254780367|r   82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA  161 (281)
Q Consensus        82 l~~~~~~~~~~~~~i~~~~~l~~as~~~~~l~~~~~~i~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (281)
T Consensus        91 l~~~~~~~~~~~~~~g~~~~lwtas~~~~~l~~~lN~i~~~~~~r~~~~~~l~~l~~~i~~~~~l~~~l~l~v~~~~~~~  170 (303)
T COG1295          91 LKNFLSQSRGSLLSLGLVVALWTASNGMSALRDALNKIWRVKPRRSFIRRRLLSLFWTLGTLLPLLFALLLSVVGPIALQ  170 (303)
T ss_pred             HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99997077875499999999999999999999999999768887748999999999999999999999999999999999


Q ss_pred             HHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf             9974146--52107999999999999999999999998405777-67521012218999999999999999999865222
Q gi|254780367|r  162 YVRKFFP--ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY  238 (281)
Q Consensus       162 ~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~~P~~-~~~~~~~~~Ga~~a~v~~~~~~~~f~~y~~~~~~~  238 (281)
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~ly~~lP~~~~~~~~~~~~Ga~~aai~~~i~~~~f~~Yv~~~~~y  250 (303)
T COG1295         171 ALLLRFGLPFFDVLVLILLRLRLLVSLLLLTLGFFLLYRFLPNVRVLKWRDVLPGALLAAILFELGKYLFGYYLSNFANY  250 (303)
T ss_pred             HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99986055503468999999999999999999999999991787653017878999999999999999999999986033


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             467899999999999999999999999999999999832379
Q gi|254780367|r  239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK  280 (281)
Q Consensus       239 ~~~YGsl~~ii~lllWly~~~~ill~Ga~~na~l~~~~~~~~  280 (281)
T Consensus       251 ~~~YGalgsvi~lmlw~y~~~~I~l~Gae~~a~~~~~~~~~~  292 (303)
T COG1295         251 SSTYGALGSVIILLLWLYISALIILLGAELNATLSEYKGPRA  292 (303)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf             602667999999999999999999998999999998636144