BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780367|ref|YP_003064780.1| ribonuclease protein
[Candidatus Liberibacter asiaticus str. psy62]
(281 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780367|ref|YP_003064780.1| ribonuclease protein [Candidatus Liberibacter asiaticus str. psy62]
gi|254040044|gb|ACT56840.1| ribonuclease protein [Candidatus Liberibacter asiaticus str. psy62]
Length = 281
Score = 558 bits (1437), Expect = e-157, Method: Compositional matrix adjust.
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP
Sbjct: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY
Sbjct: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG
Sbjct: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST
Sbjct: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP
Sbjct: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
>gi|315121834|ref|YP_004062323.1| ribonuclease protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495236|gb|ADR51835.1| ribonuclease protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 284
Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/280 (80%), Positives = 255/280 (91%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++YF I+F+I+YDA+EHFVEEDGWAMASHISL+ALLSVFPFIVF ANLAGFLGAH+FVP
Sbjct: 1 MQKYFGIIFNIVYDAVEHFVEEDGWAMASHISLAALLSVFPFIVFCANLAGFLGAHEFVP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TVI V FGAWP+VIAKPITDEI QVLAVP KGLFTISALAA YFSSNG+EALR+SLNRAY
Sbjct: 61 TVISVFFGAWPDVIAKPITDEIFQVLAVPRKGLFTISALAAVYFSSNGIEALRVSLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVVEMRSWYITRLIS GYVLLAS+TLVIMSF+FV +PLALAYV+ FP+LGN++ I+WNG
Sbjct: 121 RVVEMRSWYITRLISLGYVLLASITLVIMSFIFVVVPLALAYVKTLFPSLGNMVEIVWNG 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R+Y +LALFIGLIFVHLFLPA K K+ +LPG+IFT ISW++GAVLFTHYIVTFSTYS
Sbjct: 181 RLYGAVLALFIGLIFVHLFLPAGKRKVWIVLPGIIFTSISWLIGAVLFTHYIVTFSTYSA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
MYAGLASI CLVFLYMLGV FI+GAE+NAS II+YW K+
Sbjct: 241 MYAGLASITICLVFLYMLGVIFIIGAEINASTIIHYWEKR 280
>gi|222087339|ref|YP_002545876.1| ribonuclease protein [Agrobacterium radiobacter K84]
gi|221724787|gb|ACM27943.1| ribonuclease protein [Agrobacterium radiobacter K84]
Length = 310
Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 145/279 (51%), Positives = 206/279 (73%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++ ++YDA+ HFVE+DG+AMASH++LS LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPTFVRALYKVVYDAVFHFVEDDGFAMASHVALSTLLAVFPFLIFGTALASFLGASQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + ++F WPE IAKP+ D+++QVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAVHLIFDTWPEAIAKPVADQVVQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY RL S GYVL+A + ++S + VA+PLAL Y R++ P L ++L ++++
Sbjct: 121 RVPETRPWYFNRLASLGYVLIAVLIFALLSILLVAVPLALNYTRQWLPGLADILDVVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T+ L GL+ +HL+L A + ++ ++PGV T + W +GA+LF +Y+ TF+ Y+
Sbjct: 181 RIYGTIFLLVAGLLILHLWLAAGRRRLFDVIPGVFLTLVFWSIGALLFAYYLSTFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M L+FLYML V FI+GAE+NA+++ + R+
Sbjct: 241 TYAGLASVMIVLIFLYMLAVIFIMGAEINAALMKFKVRR 279
>gi|86359370|ref|YP_471262.1| putative ribonuclease protein [Rhizobium etli CFN 42]
gi|86283472|gb|ABC92535.1| putative ribonuclease protein [Rhizobium etli CFN 42]
Length = 307
Score = 301 bits (772), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/273 (55%), Positives = 207/273 (75%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY TRL S GYVL+A + +S + VA+PLAL Y RK+ P + L ++++
Sbjct: 121 RVQETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARKWLPLFADTLDVVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L IGL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTIGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALVFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
YAGLAS+M L+FLYM+GV FI+GAE+NA++I
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALI 273
>gi|190893623|ref|YP_001980165.1| ribonuclease [Rhizobium etli CIAT 652]
gi|190698902|gb|ACE92987.1| putative ribonuclease protein [Rhizobium etli CIAT 652]
Length = 307
Score = 298 bits (763), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/273 (55%), Positives = 208/273 (76%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++
Sbjct: 121 RVQETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
YAGLAS+M L+FLYM+GV FI+GAE+NA++I
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALI 273
>gi|241206535|ref|YP_002977631.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860425|gb|ACS58092.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 307
Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/273 (55%), Positives = 209/273 (76%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R+WY TRL S GYVL+A + +S + VA+PLAL Y RK+FP + L I+++
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFTAISILLVALPLALDYSRKWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
YAGLAS+M L+FLYM+GV FI+GAE+NA++I
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALI 273
>gi|116254049|ref|YP_769887.1| transmembrane ribonuclease protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115258697|emb|CAK09802.1| putative transmembrane ribonuclease protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 307
Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/273 (55%), Positives = 209/273 (76%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R+WY TRL S GYVL+A + +S + VA+PLAL Y RK+FP + L I+++
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFTAISILLVALPLALDYSRKWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
YAGLAS+M L+FLYM+GV FI+GAE+NA++I
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALI 273
>gi|332716378|ref|YP_004443844.1| ribonuclease [Agrobacterium sp. H13-3]
gi|325063063|gb|ADY66753.1| ribonuclease [Agrobacterium sp. H13-3]
Length = 305
Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 144/270 (53%), Positives = 196/270 (72%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ +DA HF E+DGWAMASH++LS LL++FPF++FG LAGFLGA QF T + ++F
Sbjct: 10 KVAFDAYSHFAEDDGWAMASHMALSILLALFPFLIFGTALAGFLGADQFSETAVHLIFDT 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WPE IA P+ ++ QVL +P GL TIS LAAAYF+SNGVEALRISLNRAYRV E R WY
Sbjct: 70 WPEAIAGPLAAQVQQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAYRVTETRWWY 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
ITRL+S YVL+A V +S V VA+P+A ++ + FP L + L + + +Y T++ L
Sbjct: 130 ITRLLSLLYVLIAVVVFTGISIVLVAVPVATSFAEQRFPWLTDALNTVSSLGLYGTIVVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+GL+ HL+LPA K +I + PG++ T I WV+GA +F +Y+ TF+ Y+ YAGLAS+M
Sbjct: 190 TVGLVAAHLWLPAGKRRIWDVWPGILLTMIFWVIGAAIFAYYLSTFANYAATYAGLASVM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LVFLYM+GV F+LGAE+NA+++ Y R+
Sbjct: 250 VVLVFLYMVGVIFMLGAEVNAALMKYKVRQ 279
>gi|209551132|ref|YP_002283049.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209536888|gb|ACI56823.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 307
Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 151/273 (55%), Positives = 207/273 (75%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPKALRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++
Sbjct: 121 RVQETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
YAGLAS+M L+FLYM+GV FI+GAE+NA++I
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALI 273
>gi|218663736|ref|ZP_03519666.1| putative ribonuclease protein [Rhizobium etli IE4771]
Length = 307
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/273 (54%), Positives = 207/273 (75%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R+WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLGIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
YAGLAS+M L+FLYM+G FI+GAE+NA++I
Sbjct: 241 TYAGLASVMIVLIFLYMVGAIFIIGAEINAALI 273
>gi|159185810|ref|NP_357022.2| transporter [Agrobacterium tumefaciens str. C58]
gi|159140944|gb|AAK89807.2| transporter [Agrobacterium tumefaciens str. C58]
Length = 305
Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/270 (53%), Positives = 195/270 (72%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ +DA HF E+DGWAMASH++LS LL++FPF++FG LAGFLGA QF T + ++F
Sbjct: 10 KVAFDAYSHFAEDDGWAMASHMALSILLALFPFLIFGTALAGFLGADQFSETAVHLIFDT 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WPE IA P+ ++ QVL +P GL TIS LAAAYF+SNGVEALRISLNRAYRV E R WY
Sbjct: 70 WPEAIAGPLAAQVQQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAYRVTETRWWY 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+TRL+S YVL+A V +S V VA+P+A ++ FP L +LL + + +Y T++ L
Sbjct: 130 VTRLLSLLYVLIAVVVFTGISIVLVAVPVATSFAEARFPWLTDLLNTVSSLGLYGTIVVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
GL+ HL+LPA K +I + PG++ T I WV+GA +F +Y+ TF+ Y+ YAGLAS+M
Sbjct: 190 TAGLVAAHLWLPAGKRRIWDVWPGILLTMIFWVIGAAIFAYYLSTFANYAATYAGLASVM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LVFLYM+GV F+LGAE+NA+++ Y R+
Sbjct: 250 VVLVFLYMVGVIFMLGAEVNAALMKYKVRQ 279
>gi|218674258|ref|ZP_03523927.1| putative ribonuclease protein [Rhizobium etli GR56]
Length = 314
Score = 290 bits (743), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/271 (54%), Positives = 204/271 (75%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
E ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF T
Sbjct: 10 EVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSSTA 69
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAYRV
Sbjct: 70 IHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAYRV 129
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++ RI
Sbjct: 130 QETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLDIVFSWRI 189
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
Y T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+ Y
Sbjct: 190 YGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTATY 249
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
AGLAS+M L+FLYM+G FI+GAE+NA++I
Sbjct: 250 AGLASVMIVLIFLYMVGAIFIIGAEINAALI 280
>gi|15966391|ref|NP_386744.1| putative ribonuclease RNase BN (RBN) transmembrane protein
[Sinorhizobium meliloti 1021]
gi|307313022|ref|ZP_07592649.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
gi|307321028|ref|ZP_07600434.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|15075662|emb|CAC47217.1| Probable transporter [Sinorhizobium meliloti 1021]
gi|306893303|gb|EFN24083.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|306899341|gb|EFN29975.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
Length = 291
Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/275 (52%), Positives = 194/275 (70%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + I++ +++DA+ HF E+DGWAMASH++LS+L++VFPF++FG LA FLGA QF
Sbjct: 1 MPAFVRIIWKVVFDALWHFSEDDGWAMASHVALSSLMAVFPFLIFGTALASFLGADQFAQ 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + ++F WPE IAKP+ DE+++VL +P L TIS LAAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHLIFDTWPESIAKPVADEVVRVLTIPRGSLLTISVLAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY+TRL S G+VL A + L +S + VA+PLA+ ++FP L L+ + +
Sbjct: 121 RVAESRYWYVTRLASLGFVLGAVLILAALSILLVAVPLAVRNADQWFPWLDALMAAVDDW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T+ L GL+ HL+LPA ++ +LPG+ T + W VGA F YI FS Y T
Sbjct: 181 GLPLTLTMLTAGLLVAHLWLPAGHRNVVDVLPGIFLTLVLWSVGAYAFASYIANFSNYVT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
YAGLASIM LVFLYMLG FI+GAE+NA+++ Y
Sbjct: 241 TYAGLASIMIVLVFLYMLGAIFIIGAEINAAILKY 275
>gi|222149946|ref|YP_002550903.1| ribonuclease transmembrane protein [Agrobacterium vitis S4]
gi|221736928|gb|ACM37891.1| ribonuclease transmembrane protein [Agrobacterium vitis S4]
Length = 298
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 200/275 (72%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR Y ++ + +DA+ HF E+DGWAMASH++LS LL+VFPF++FG LAG LGA+ F P
Sbjct: 1 MRSYLGRLYKVAFDAVWHFTEDDGWAMASHVALSILLAVFPFLIFGTALAGLLGANTFAP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I +F WPE IAKPI+++++QVL +P GL TIS LAAAYF+SNGVEALR +LNRAY
Sbjct: 61 TAIHFIFDTWPEEIAKPISEQVVQVLTIPRGGLLTISVLAAAYFASNGVEALRTALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WYITRLIS G+V++ ++S + +A+P+AL + + FP L + L ++ N
Sbjct: 121 RVTETRPWYITRLISLGFVIMGVAAFAVISVLLIAVPIALRFAERQFPLLKDFLALVSNW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T++ L +GL HL+LPA + +++ +LPG+ T + W++GA+ F Y+ TF+ Y+
Sbjct: 181 SVLGTLILLAVGLTISHLWLPADRRRLIDVLPGICLTLLLWLLGALAFAAYLATFANYAA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
YAGLAS+M ++FLYMLGV F++GAE NA+++ +
Sbjct: 241 TYAGLASVMVVIIFLYMLGVLFLIGAEFNAALMKF 275
>gi|150397725|ref|YP_001328192.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
gi|150029240|gb|ABR61357.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
Length = 290
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/269 (52%), Positives = 194/269 (72%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I++ +++DA+ HF E+DGWAMASH++LS+L++VFPF++FG LA FLGA QF T + ++
Sbjct: 6 IIWKVVFDALWHFSEDDGWAMASHVALSSLMAVFPFLIFGTALASFLGADQFAETAVHLI 65
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F WPE IAKP+ DE+++VL +P L TIS LAAAYF+SNGVEALRI+LNRAYRV E R
Sbjct: 66 FDTWPESIAKPVADEVVRVLTIPRGSLLTISVLAAAYFASNGVEALRIALNRAYRVAESR 125
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
SWY+TRL S G+VL A + L +S + VA+PLA+ ++FP L ++ + + + T+
Sbjct: 126 SWYVTRLSSLGFVLGAVLILAALSLLLVAVPLAVRNADQWFPWLDTVMAAVDDWGLTLTL 185
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L GL+ HL+LP+ I+ +LPG+ T + W VG F YI FS+Y+T YAGLA
Sbjct: 186 AMLTAGLLVAHLWLPSGHRNIVDVLPGIFLTLVLWSVGGYAFASYIANFSSYATTYAGLA 245
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
SIM LVFLYMLG FI+GAE+NA+++ Y
Sbjct: 246 SIMVVLVFLYMLGAIFIIGAEINAAILKY 274
>gi|227823215|ref|YP_002827187.1| putative ribonuclease protein [Sinorhizobium fredii NGR234]
gi|227342216|gb|ACP26434.1| putative ribonuclease protein [Sinorhizobium fredii NGR234]
Length = 295
Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 195/279 (69%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M I++ +++DA+ HF E+DGWAMASH++LS+L++VFPF++FG L FLGA QF
Sbjct: 1 MPASLRIIWKVVFDALWHFSEDDGWAMASHVALSSLMAVFPFLIFGTALGSFLGADQFAV 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + ++F AWPE IAKP+ DEI++VL + G+ T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHLIFDAWPESIAKPVADEIVEVLTIQRGGVLTLSVVAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WYITRL S G+VL + L ++S + VA+PLA+ ++ P L +L + N
Sbjct: 121 RVAESRPWYITRLASLGFVLAGVLILAVISILLVAVPLAVRNADQWLPWLDAVLATVDNW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ L GL+ HL+LP KI+ +LPGV+ T + W +GA F Y+ TFS Y
Sbjct: 181 GLALALVMLTGGLLVSHLWLPDGHRKIVDVLPGVLLTLLLWSIGAYAFASYLATFSNYVA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLASI+ LVFLYM+G FI+GAE+NA+++ + ++
Sbjct: 241 TYAGLASIVVVLVFLYMVGAIFIIGAEINAAILKFKVKR 279
>gi|163759906|ref|ZP_02166990.1| putative ribonuclease rnase bn (rbn) transmembrane protein [Hoeflea
phototrophica DFL-43]
gi|162282864|gb|EDQ33151.1| putative ribonuclease rnase bn (rbn) transmembrane protein [Hoeflea
phototrophica DFL-43]
Length = 317
Score = 268 bits (686), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/271 (49%), Positives = 192/271 (70%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+I+DA+ HF ++DGWAMASH++LS L+++FPF++FG LA FLGA+ + T ++F
Sbjct: 40 SVIWDAVTHFNDDDGWAMASHVALSILMALFPFMIFGTALASFLGANAYAETASHLIFDT 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WPE IA PI++E+++VL V GL T+S LAAA+FS+NGVEALR+SLNRAYRV E R+WY
Sbjct: 100 WPESIAAPISNEVVKVLTVERGGLLTLSVLAAAFFSANGVEALRVSLNRAYRVTETRAWY 159
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+TR+ S +V++A + ++ +SF+ V PLAL R+F P + L+ + N RI L
Sbjct: 160 VTRIQSLLFVVVAVLVIMAISFLLVLAPLALKLARQFVPWMETLISAVDNWRILIAAAVL 219
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
IGLI HL+LP + K+ +LPG+ T ++W+ GA++F Y+ F+TY + YAGLASIM
Sbjct: 220 VIGLIVSHLWLPDGRRKLFDVLPGIGVTLVAWMAGALMFASYLKEFATYVSTYAGLASIM 279
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LVFLY++ FILGAE+NA+++ R K
Sbjct: 280 IALVFLYIVAAIFILGAEINAALLKAAERAK 310
>gi|153008339|ref|YP_001369554.1| putative ribonuclease BN [Ochrobactrum anthropi ATCC 49188]
gi|151560227|gb|ABS13725.1| putative ribonuclease BN [Ochrobactrum anthropi ATCC 49188]
Length = 288
Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 185/280 (66%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ + I YD I HF +DGWA ASHI+LS L+++FPF++F LA FLG +F
Sbjct: 1 MRKIRRFLRQITYDVIGHFSSDDGWAFASHIALSGLMALFPFLIFATTLASFLGTKEFAD 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E++ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVMNVLTVQRSGLLTLSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRLAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A+ F Y+ TF+TY T
Sbjct: 181 RYTVAVGVLVLALFMVHIWLPAGRRSLGDILPGILITLIAWLAAAMAFAKYLETFATYVT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIIGAEINAAIMIFRKREQ 280
>gi|163844000|ref|YP_001628404.1| YihY family protein [Brucella suis ATCC 23445]
gi|163674723|gb|ABY38834.1| YihY family protein [Brucella suis ATCC 23445]
Length = 286
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 180/271 (66%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F T + V+FG
Sbjct: 10 QITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFANTAVHVIFGM 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAYRV + RS
Sbjct: 70 WPSNIAAPIANEVKSVLTVQRRGLLTVSVIAAAYFASNGVEALRIALNRAYRVTDQRSII 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I R + L
Sbjct: 130 FCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFWRYTIAVAVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y + YAGLASIM
Sbjct: 190 VLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVSTYAGLASIM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+VFLYML FI+GAE+NA+++I+ R++
Sbjct: 250 VAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|239832980|ref|ZP_04681309.1| YihY family protein [Ochrobactrum intermedium LMG 3301]
gi|239825247|gb|EEQ96815.1| YihY family protein [Ochrobactrum intermedium LMG 3301]
Length = 306
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 184/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ + I +D I HF +DGWA ASHI+LS L+++FPF++F LA FLG +F
Sbjct: 21 MRKIRRFLRQITWDVIGHFSSDDGWAFASHIALSGLMALFPFLIFATTLASFLGTKEFAD 80
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E++ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 81 TAVHVIFDMWPSNIAAPIANEVMNVLTVQRSGLLTLSVIAAAYFASNGVEALRIALNRAY 140
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 141 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A+ F Y+ TF+ Y T
Sbjct: 201 RYTVAVAVLVLALFMVHIWLPAGRRSLGDILPGILVTLIAWLAAAMAFAKYLETFANYVT 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 261 TYAGLASIMVAIVFLYMLSAIFIIGAEINAAIMIFRKREQ 300
>gi|23502826|ref|NP_698953.1| ribonuclease BN [Brucella suis 1330]
gi|148559336|ref|YP_001259795.1| YihY family protein [Brucella ovis ATCC 25840]
gi|161619896|ref|YP_001593783.1| YihY family protein [Brucella canis ATCC 23365]
gi|225628177|ref|ZP_03786212.1| YihY family protein [Brucella ceti str. Cudo]
gi|254704986|ref|ZP_05166814.1| YihY family protein [Brucella suis bv. 3 str. 686]
gi|254707499|ref|ZP_05169327.1| YihY family protein [Brucella pinnipedialis M163/99/10]
gi|254708961|ref|ZP_05170772.1| YihY family protein [Brucella pinnipedialis B2/94]
gi|254713610|ref|ZP_05175421.1| YihY family protein [Brucella ceti M644/93/1]
gi|254716036|ref|ZP_05177847.1| YihY family protein [Brucella ceti M13/05/1]
gi|254718029|ref|ZP_05179840.1| YihY family protein [Brucella sp. 83/13]
gi|256030488|ref|ZP_05444102.1| YihY family protein [Brucella pinnipedialis M292/94/1]
gi|256059950|ref|ZP_05450134.1| YihY family protein [Brucella neotomae 5K33]
gi|256158474|ref|ZP_05456372.1| YihY family protein [Brucella ceti M490/95/1]
gi|256253893|ref|ZP_05459429.1| YihY family protein [Brucella ceti B1/94]
gi|256370380|ref|YP_003107891.1| ribonuclease BN, putative [Brucella microti CCM 4915]
gi|260169395|ref|ZP_05756206.1| ribonuclease BN, putative [Brucella sp. F5/99]
gi|260567540|ref|ZP_05838010.1| ribonuclease BN [Brucella suis bv. 4 str. 40]
gi|261217804|ref|ZP_05932085.1| ribonuclease BN [Brucella ceti M13/05/1]
gi|261221030|ref|ZP_05935311.1| ribonuclease BN [Brucella ceti B1/94]
gi|261314982|ref|ZP_05954179.1| ribonuclease BN [Brucella pinnipedialis M163/99/10]
gi|261316460|ref|ZP_05955657.1| ribonuclease BN [Brucella pinnipedialis B2/94]
gi|261321348|ref|ZP_05960545.1| ribonuclease BN [Brucella ceti M644/93/1]
gi|261323921|ref|ZP_05963118.1| ribonuclease BN [Brucella neotomae 5K33]
gi|261755687|ref|ZP_05999396.1| ribonuclease BN [Brucella suis bv. 3 str. 686]
gi|261758917|ref|ZP_06002626.1| ribonuclease BN [Brucella sp. F5/99]
gi|265982976|ref|ZP_06095711.1| ribonuclease BN [Brucella sp. 83/13]
gi|265987530|ref|ZP_06100087.1| ribonuclease BN [Brucella pinnipedialis M292/94/1]
gi|265996990|ref|ZP_06109547.1| ribonuclease BN [Brucella ceti M490/95/1]
gi|306837589|ref|ZP_07470460.1| YihY family protein [Brucella sp. NF 2653]
gi|306842886|ref|ZP_07475523.1| YihY family protein [Brucella sp. BO2]
gi|306843415|ref|ZP_07476016.1| YihY family protein [Brucella sp. BO1]
gi|23348851|gb|AAN30868.1| ribonuclease BN, putative [Brucella suis 1330]
gi|148370593|gb|ABQ60572.1| YihY family protein [Brucella ovis ATCC 25840]
gi|161336707|gb|ABX63012.1| YihY family protein [Brucella canis ATCC 23365]
gi|225617002|gb|EEH14049.1| YihY family protein [Brucella ceti str. Cudo]
gi|256000543|gb|ACU48942.1| ribonuclease BN, putative [Brucella microti CCM 4915]
gi|260157058|gb|EEW92138.1| ribonuclease BN [Brucella suis bv. 4 str. 40]
gi|260919614|gb|EEX86267.1| ribonuclease BN [Brucella ceti B1/94]
gi|260922893|gb|EEX89461.1| ribonuclease BN [Brucella ceti M13/05/1]
gi|261294038|gb|EEX97534.1| ribonuclease BN [Brucella ceti M644/93/1]
gi|261295683|gb|EEX99179.1| ribonuclease BN [Brucella pinnipedialis B2/94]
gi|261299901|gb|EEY03398.1| ribonuclease BN [Brucella neotomae 5K33]
gi|261304008|gb|EEY07505.1| ribonuclease BN [Brucella pinnipedialis M163/99/10]
gi|261738901|gb|EEY26897.1| ribonuclease BN [Brucella sp. F5/99]
gi|261745440|gb|EEY33366.1| ribonuclease BN [Brucella suis bv. 3 str. 686]
gi|262551458|gb|EEZ07448.1| ribonuclease BN [Brucella ceti M490/95/1]
gi|264659727|gb|EEZ29988.1| ribonuclease BN [Brucella pinnipedialis M292/94/1]
gi|264661568|gb|EEZ31829.1| ribonuclease BN [Brucella sp. 83/13]
gi|306276106|gb|EFM57806.1| YihY family protein [Brucella sp. BO1]
gi|306286973|gb|EFM58490.1| YihY family protein [Brucella sp. BO2]
gi|306407296|gb|EFM63504.1| YihY family protein [Brucella sp. NF 2653]
Length = 286
Score = 238 bits (607), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 179/271 (66%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F T + V+F
Sbjct: 10 QITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFANTAVHVIFDM 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAYRV + RS
Sbjct: 70 WPSNIAAPIANEVKSVLTVQRRGLLTVSVIAAAYFASNGVEALRIALNRAYRVTDQRSII 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I R + L
Sbjct: 130 FCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFWRYTIAVAVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y + YAGLASIM
Sbjct: 190 VLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVSTYAGLASIM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+VFLYML FI+GAE+NA+++I+ R++
Sbjct: 250 VAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|294851216|ref|ZP_06791889.1| yihY [Brucella sp. NVSL 07-0026]
gi|294819805|gb|EFG36804.1| yihY [Brucella sp. NVSL 07-0026]
Length = 286
Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 179/271 (66%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F T + V+F
Sbjct: 10 QITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFANTAVHVIFDM 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAYRV + RS
Sbjct: 70 WPSNIAAPIANEVKSVLTVQRRGLLTVSVIAAAYFASNGVEALRIALNRAYRVTDQRSII 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I R + L
Sbjct: 130 FCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFWRYTIVVAVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y + YAGLASIM
Sbjct: 190 VLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVSTYAGLASIM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+VFLYML FI+GAE+NA+++I+ R++
Sbjct: 250 VAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|254700616|ref|ZP_05162444.1| YihY family protein [Brucella suis bv. 5 str. 513]
gi|261751125|ref|ZP_05994834.1| ribonuclease BN [Brucella suis bv. 5 str. 513]
gi|261740878|gb|EEY28804.1| ribonuclease BN [Brucella suis bv. 5 str. 513]
Length = 286
Score = 238 bits (606), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 179/271 (66%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F T + V+F
Sbjct: 10 QITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFANTAVHVIFDM 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAYRV + RS
Sbjct: 70 WPSNIAAPIANEVKSVLTVQHRGLLTVSVIAAAYFASNGVEALRIALNRAYRVTDQRSII 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I R + L
Sbjct: 130 FCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFWRYTIAVAVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y + YAGLASIM
Sbjct: 190 VLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVSTYAGLASIM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+VFLYML FI+GAE+NA+++I+ R++
Sbjct: 250 VAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|17986373|ref|NP_539007.1| ribonuclease BN [Brucella melitensis bv. 1 str. 16M]
gi|62290826|ref|YP_222619.1| ribonuclease BN [Brucella abortus bv. 1 str. 9-941]
gi|82700738|ref|YP_415312.1| ribonuclease BN [Brucella melitensis biovar Abortus 2308]
gi|189025045|ref|YP_001935813.1| Ribonuclease BN [Brucella abortus S19]
gi|237816340|ref|ZP_04595333.1| YihY family protein [Brucella abortus str. 2308 A]
gi|254690116|ref|ZP_05153370.1| Ribonuclease BN [Brucella abortus bv. 6 str. 870]
gi|254694606|ref|ZP_05156434.1| Ribonuclease BN [Brucella abortus bv. 3 str. Tulya]
gi|254696231|ref|ZP_05158059.1| Ribonuclease BN [Brucella abortus bv. 2 str. 86/8/59]
gi|254731149|ref|ZP_05189727.1| Ribonuclease BN [Brucella abortus bv. 4 str. 292]
gi|256045579|ref|ZP_05448459.1| Ribonuclease BN [Brucella melitensis bv. 1 str. Rev.1]
gi|256258370|ref|ZP_05463906.1| Ribonuclease BN [Brucella abortus bv. 9 str. C68]
gi|260546093|ref|ZP_05821833.1| ribonuclease BN [Brucella abortus NCTC 8038]
gi|260562890|ref|ZP_05833376.1| ribonuclease BN [Brucella melitensis bv. 1 str. 16M]
gi|260755655|ref|ZP_05868003.1| ribonuclease BN [Brucella abortus bv. 6 str. 870]
gi|260758880|ref|ZP_05871228.1| ribonuclease BN [Brucella abortus bv. 4 str. 292]
gi|260760604|ref|ZP_05872947.1| ribonuclease BN [Brucella abortus bv. 2 str. 86/8/59]
gi|260884680|ref|ZP_05896294.1| ribonuclease BN [Brucella abortus bv. 9 str. C68]
gi|261214930|ref|ZP_05929211.1| ribonuclease BN [Brucella abortus bv. 3 str. Tulya]
gi|265992003|ref|ZP_06104560.1| ribonuclease BN [Brucella melitensis bv. 1 str. Rev.1]
gi|297247212|ref|ZP_06930930.1| ribonuclease BN [Brucella abortus bv. 5 str. B3196]
gi|17981963|gb|AAL51271.1| ribonuclease bn [Brucella melitensis bv. 1 str. 16M]
gi|62196958|gb|AAX75258.1| ribonuclease BN, hypothetical [Brucella abortus bv. 1 str. 9-941]
gi|82616839|emb|CAJ11935.1| Ribonuclease BN [Brucella melitensis biovar Abortus 2308]
gi|189020617|gb|ACD73339.1| Ribonuclease BN [Brucella abortus S19]
gi|237788407|gb|EEP62622.1| YihY family protein [Brucella abortus str. 2308 A]
gi|260096200|gb|EEW80076.1| ribonuclease BN [Brucella abortus NCTC 8038]
gi|260152906|gb|EEW87998.1| ribonuclease BN [Brucella melitensis bv. 1 str. 16M]
gi|260669198|gb|EEX56138.1| ribonuclease BN [Brucella abortus bv. 4 str. 292]
gi|260671036|gb|EEX57857.1| ribonuclease BN [Brucella abortus bv. 2 str. 86/8/59]
gi|260675763|gb|EEX62584.1| ribonuclease BN [Brucella abortus bv. 6 str. 870]
gi|260874208|gb|EEX81277.1| ribonuclease BN [Brucella abortus bv. 9 str. C68]
gi|260916537|gb|EEX83398.1| ribonuclease BN [Brucella abortus bv. 3 str. Tulya]
gi|263003069|gb|EEZ15362.1| ribonuclease BN [Brucella melitensis bv. 1 str. Rev.1]
gi|297174381|gb|EFH33728.1| ribonuclease BN [Brucella abortus bv. 5 str. B3196]
Length = 286
Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 178/271 (65%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F T + V+F
Sbjct: 10 QITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFANTAVHVIFDM 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WP IA PI +E+ VL V GL T+S +AAAYF+SNGVEALRI+LNRAYRV + RS
Sbjct: 70 WPSNIAAPIANEVKSVLTVQRHGLLTVSVIAAAYFASNGVEALRIALNRAYRVTDQRSII 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I R + L
Sbjct: 130 FCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFWRYTIAVAVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y + YAGLASIM
Sbjct: 190 VLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVSTYAGLASIM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+VFLYML FI+GAE+NA+++I+ R++
Sbjct: 250 VAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|256112306|ref|ZP_05453227.1| Ribonuclease BN [Brucella melitensis bv. 3 str. Ether]
gi|265993739|ref|ZP_06106296.1| ribonuclease BN [Brucella melitensis bv. 3 str. Ether]
gi|262764720|gb|EEZ10641.1| ribonuclease BN [Brucella melitensis bv. 3 str. Ether]
Length = 286
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 178/271 (65%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F T + V+F
Sbjct: 10 QITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFANTAVHVIFDM 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WP IA PI +E+ VL V GL T+S +AAAYF+SNGVEALRI+LNRAYRV + RS
Sbjct: 70 WPSNIAAPIANEVKSVLTVQRHGLLTVSVIAAAYFASNGVEALRIALNRAYRVTDQRSII 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I R + L
Sbjct: 130 FCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFWRYTIAVAVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y + YAGLASIM
Sbjct: 190 VLELFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVSTYAGLASIM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+VFLYML FI+GAE+NA+++I+ R++
Sbjct: 250 VAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|225853414|ref|YP_002733647.1| YihY family protein [Brucella melitensis ATCC 23457]
gi|256263106|ref|ZP_05465638.1| ribonuclease BN [Brucella melitensis bv. 2 str. 63/9]
gi|225641779|gb|ACO01693.1| YihY family protein [Brucella melitensis ATCC 23457]
gi|263093007|gb|EEZ17157.1| ribonuclease BN [Brucella melitensis bv. 2 str. 63/9]
gi|326409977|gb|ADZ67042.1| YihY family protein [Brucella melitensis M28]
gi|326539694|gb|ADZ87909.1| YihY family protein [Brucella melitensis M5-90]
Length = 286
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 178/271 (65%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F T + V+F
Sbjct: 10 QITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFANTAVHVIFDM 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WP IA PI +E+ VL V GL T+S +AAAYF+SNGVEALRI+LNRAYRV + RS
Sbjct: 70 WPSNIAVPIANEVKSVLTVQRHGLLTVSVIAAAYFASNGVEALRIALNRAYRVTDQRSII 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I R + L
Sbjct: 130 FCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFWRYTIAVAVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y + YAGLASIM
Sbjct: 190 VLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVSTYAGLASIM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+VFLYML FI+GAE+NA+++I+ R++
Sbjct: 250 VAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|307942625|ref|ZP_07657973.1| YihY family protein [Roseibium sp. TrichSKD4]
gi|307774264|gb|EFO33477.1| YihY family protein [Roseibium sp. TrichSKD4]
Length = 284
Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/263 (47%), Positives = 166/263 (63%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ DA+ HFV +DG+AMASH++LSALL+VFP ++F A LAGF+G H ++VF AW
Sbjct: 13 VLKDALGHFVNDDGYAMASHVALSALLAVFPLLIFIAALAGFMGFHDAADRASNLVFDAW 72
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE +AKP+ DEI +VL VP L T + A +F+SNGVEA+R +LNRAYR E RS
Sbjct: 73 PENVAKPLVDEIHRVLTVPRGDLLTFGVVGALWFASNGVEAMRSALNRAYRQQEKRSIVF 132
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S G V+L +V L+ +F+ V PL + V + PA L+ I R L
Sbjct: 133 LRLQSLGLVILGAVVLIAYTFLVVLAPLVIKTVVNWIPAAEEFLVTIDVARYSVAGSLLT 192
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
IGL+ H LP+ K +LPGV+ T + W+V +F Y+ F+TY T Y GLA IM+
Sbjct: 193 IGLLLTHWILPSGSRKFRELLPGVVATLVMWMVAGAVFGAYLAKFATYVTTYGGLAGIMS 252
Query: 251 CLVFLYMLGVFFILGAELNASMI 273
+VFLY+ + FILG ELNASMI
Sbjct: 253 AVVFLYICSLGFILGGELNASMI 275
>gi|319781313|ref|YP_004140789.1| ribonuclease BN [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167201|gb|ADV10739.1| ribonuclease BN [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 283
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 176/270 (65%), Gaps = 10/270 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++YDA+ HF +DGWAMASH+++++L+++FPF++F LA FLGA F T + +VF W
Sbjct: 11 VLYDALGHFNTDDGWAMASHLAITSLMALFPFLIFATTLASFLGAQAFSDTAVHLVFDTW 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE IAKPI E+L VL V L T + AAYF+SNG+EALR SLNRAYRV E R
Sbjct: 71 PEQIAKPIAREVLNVLTVRRTDLLTYGVVLAAYFASNGIEALRTSLNRAYRVSETRGIIY 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIP----LALAYVRKFFPALGNLLLIIWNGRIYATM 186
R+ S +VL+A+ + +S + V P LA A++ P +G + L W Y
Sbjct: 131 RRVQSIIFVLIATAGFLAISVLLVFAPLLARLAEAHIDWIKPYMGTITL--WR---YVIA 185
Query: 187 LALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+ +G +F VH +LPA K + +S++PG++FT +W++G+ +F Y+ FS+Y T YAGL
Sbjct: 186 SAVIVGGLFAVHFWLPAGKRRFVSLVPGIVFTLAAWLIGSTIFATYLDHFSSYVTTYAGL 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
ASIM +VFLYM+ FILG ELNA++ Y
Sbjct: 246 ASIMIAVVFLYMVSAIFILGGELNAAISRY 275
>gi|260466711|ref|ZP_05812898.1| ribonuclease BN [Mesorhizobium opportunistum WSM2075]
gi|259029574|gb|EEW30863.1| ribonuclease BN [Mesorhizobium opportunistum WSM2075]
Length = 283
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/270 (46%), Positives = 173/270 (64%), Gaps = 10/270 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++YDAI HF +DGWAMASH+++++L+++FPF++F L FLGA F T + +VF W
Sbjct: 11 VLYDAIGHFNTDDGWAMASHLAITSLMALFPFLIFATTLGSFLGAQAFADTAVHLVFDTW 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ IAKPI E+L VL V L T L AAYF+SNG+EALR SLNRAYRV E R
Sbjct: 71 PDQIAKPIAHEVLNVLTVRRTDLLTYGVLLAAYFASNGIEALRTSLNRAYRVTETRGIIY 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIP----LALAYVRKFFPALGNLLLIIWNGRIYATM 186
R+ S +VL+A+ + +S + V P LA A+ P G + L W Y
Sbjct: 131 RRVQSIFFVLIATAGFLAISVLLVFAPLLARLAEAHFEWIKPYTGTITL--WR---YVIA 185
Query: 187 LALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+ IG +F VH +LPA K + +S++PG+IFT +W++G+ +F Y+ FS+Y T YAGL
Sbjct: 186 SAVIIGGLFAVHYWLPAGKRRFVSLVPGIIFTLAAWLIGSTIFATYLDHFSSYVTTYAGL 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
ASIM +VFLY++ FILG ELNA++ Y
Sbjct: 246 ASIMIAVVFLYIVSAIFILGGELNAAISRY 275
>gi|13473007|ref|NP_104574.1| hypothetical protein mll3481 [Mesorhizobium loti MAFF303099]
gi|14023755|dbj|BAB50360.1| mll3481 [Mesorhizobium loti MAFF303099]
Length = 310
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/270 (45%), Positives = 173/270 (64%), Gaps = 10/270 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++YDA+ HF +DGWAMASH+++++L+++FPF++F L FLGA F T + +VF W
Sbjct: 38 VLYDALGHFNTDDGWAMASHLAITSLMALFPFLIFATTLGSFLGAQAFADTAVHLVFDTW 97
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ IAKPI E+L VL V L T L AAYF+SNG+EALR SLNRAYRV E R
Sbjct: 98 PDQIAKPIAHEVLNVLTVRRTDLLTYGVLLAAYFASNGIEALRTSLNRAYRVTETRGIIY 157
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIP----LALAYVRKFFPALGNLLLIIWNGRIYATM 186
R+ S +VL+A+ + +S + V P LA A+ P G + L W Y
Sbjct: 158 RRVQSIFFVLIATAGFLAISVLLVFAPLLARLAEAHFEWIKPYTGTITL--WR---YVIA 212
Query: 187 LALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+ IG +F VH +LPA K + +S++PG++FT +W++G+ +F Y+ FS+Y T YAGL
Sbjct: 213 SAVIIGGLFAVHYWLPAGKRRFVSLVPGIVFTLAAWLIGSTMFATYLDHFSSYVTTYAGL 272
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
ASIM +VFLY++ FILG ELNA++ Y
Sbjct: 273 ASIMIAVVFLYIVSAIFILGGELNAAISRY 302
>gi|110635357|ref|YP_675565.1| putative ribonuclease BN [Mesorhizobium sp. BNC1]
gi|110286341|gb|ABG64400.1| putative ribonuclease BN [Chelativorans sp. BNC1]
Length = 283
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 178/274 (64%), Gaps = 8/274 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ DA HF +DGWAMASH+++SA++++FPF++F A LA FLGA F T + +VF W
Sbjct: 10 IVRDAFGHFNADDGWAMASHLAVSAIMALFPFLIFAAALASFLGADAFADTAVHIVFDTW 69
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ +A+P+ E+ VL V + T + AA+F+SNGVEALR+SLNRAYRV E RS
Sbjct: 70 PKEVAEPLAREVRNVLGVRRGDVLTFGVVLAAFFASNGVEALRLSLNRAYRVEERRSMIF 129
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIP----LALAYVRKFFPALGNLLLIIWNGRIYATM 186
RL S G+VL+A++ +S + V P +A++ + P +G + L W R +
Sbjct: 130 LRLQSLGFVLIATLGFTAISVLLVIAPVAANIAVSRIEWIEPYMGTITL--W--RYIVAV 185
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L L+ VH++LPA K+ I+PG+IFT + W+ G+ +F Y+ FS+Y+T YAGLA
Sbjct: 186 VVLVFALVVVHIWLPAGSRKLTDIIPGIIFTLLGWIAGSSIFAAYLGRFSSYTTTYAGLA 245
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
SIM +VFLY++ FILG E+NA+++ Y ++
Sbjct: 246 SIMVAVVFLYIISAIFILGGEINAAIMRYREARR 279
>gi|146343275|ref|YP_001208323.1| ribonuclease BN-like family transmembrane protein [Bradyrhizobium
sp. ORS278]
gi|146196081|emb|CAL80108.1| putative ribonuclease BN-like family transmembrane protein
[Bradyrhizobium sp. ORS278]
Length = 301
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/268 (44%), Positives = 169/268 (63%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F ++ DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGFLG+ ++
Sbjct: 11 IFHVVMDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFLGSKDLADQAATLIL 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP +A +T EI VL TI A+ A YF+SNGVEALR++LNRAY V+E R
Sbjct: 71 ETWPAQVADALTGEIHDVLTTTRTDALTIGAVLAVYFASNGVEALRVALNRAYGVIEQRR 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGRIYATM 186
WY RL S GY L+A+VT + MSF+ V PL LA R+F P A+ + R T+
Sbjct: 131 WYWLRLESIGYTLVAAVTALAMSFLIVLGPLMLATARRFLPLAVDANERFVNLSRYGITI 190
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGL 245
AL + L +H +LPA + M I+PG++FT+++ +V ++F Y+ F + Y TMYAGL
Sbjct: 191 SALIVALFILHAWLPAGRRSFMQIMPGIVFTFVASLVSGIVFGQYLARFANNYVTMYAGL 250
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
AS++ LVFLY + F+ G ELNAS+I
Sbjct: 251 ASVIIALVFLYFIAAIFVYGGELNASII 278
>gi|254502756|ref|ZP_05114907.1| YihY family protein [Labrenzia alexandrii DFL-11]
gi|222438827|gb|EEE45506.1| YihY family protein [Labrenzia alexandrii DFL-11]
Length = 294
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 162/262 (61%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ DAI HF +DG+AMASH++LS LL++FP ++F A+LAGF G TV ++VF AW
Sbjct: 16 VLKDAIGHFSRDDGFAMASHVALSGLLAIFPLLIFIASLAGFFGMVGAADTVSELVFDAW 75
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ +A P+ EI VL VP L T A+AA +F+SNGVEALR +LNRAYR +E RS+ +
Sbjct: 76 PKTVAAPVVREIENVLTVPRSDLLTFGAVAALWFASNGVEALRTALNRAYRQIEKRSFIL 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R+ S V+L +V L+ +F+ V PL + +R F P + LL I R L
Sbjct: 136 LRIQSLALVILGAVILLAYTFLVVLAPLGIEALRGFVPQVEPFLLSINIARYTLAGSLLI 195
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+GL H LP+ K I PGVI T + W+V F Y+ F+ Y + Y GLA IMT
Sbjct: 196 VGLFMTHWLLPSGKRSFSDIWPGVIATLLLWIVSGSAFGAYLARFANYVSTYGGLAGIMT 255
Query: 251 CLVFLYMLGVFFILGAELNASM 272
L+FLY+ + FILG ELNA++
Sbjct: 256 ALIFLYICSLAFILGGELNAAI 277
>gi|148252707|ref|YP_001237292.1| ribonuclease BN-like family transmembrane protein [Bradyrhizobium
sp. BTAi1]
gi|146404880|gb|ABQ33386.1| putative ribonuclease BN-like family transmembrane protein
[Bradyrhizobium sp. BTAi1]
Length = 301
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 169/268 (63%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F ++ DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGFLG+ + ++
Sbjct: 11 IFHVVMDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFLGSKELADQAATLML 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP +A +T EI VL TI A+ A YF+SNGVEALR++LNRAY V+E R
Sbjct: 71 ETWPAQVADALTGEIHDVLTTTRTDALTIGAVLAVYFASNGVEALRVALNRAYGVIEQRR 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGRIYATM 186
WY RL S GY L+A+ T + MSF+ V PL LA R++ P A+ + R T+
Sbjct: 131 WYWLRLESIGYTLVAAFTALAMSFLIVLGPLVLATARRYLPLAVEANERFVNLSRYGITI 190
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGL 245
AL + L +H +LPA + M I+PG++FT+I+ +V ++F Y+ F + Y TMYAGL
Sbjct: 191 SALIVALFILHAWLPAGRRSFMQIMPGIVFTFIASLVSGIVFGQYLARFANNYVTMYAGL 250
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
AS++ LVFLY + F+ G ELNAS+I
Sbjct: 251 ASVIIALVFLYFIAAIFVYGGELNASII 278
>gi|319409429|emb|CBI83078.1| ribonuclease RNAse bn transmembrane protein [Bartonella
schoenbuchensis R1]
Length = 284
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 173/278 (62%), Gaps = 1/278 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ C I+ +A+ H+V ++G A ASHI LS LL+ FPF +FGA+LA F + P
Sbjct: 2 IKNVLCYGCRILINAVSHYVRDNGSAFASHIVLSGLLAFFPFCIFGASLASFFWDFAYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I+ + P+ IA+P + EI+ VL +GL T+S + AAYF+SNGVEALR +LN+AY
Sbjct: 62 QKIEALMHLLPDAIAEPFSKEIVNVLVTQRRGLLTLSFVGAAYFASNGVEALRAALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS + R S +V++ ++ + ++SF+ V PL + + FP + + +I
Sbjct: 122 RVVDQRSLFFCRFQSLFFVIIGTIGISVISFLLVLAPLLIKITQNHFPFIVEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ LFI L+ VH +LPA + K+ ILPG+I T W ++ F HY+ F+ ST
Sbjct: 182 RYTIAVVVLFISLLIVHKWLPAKRRKLRDILPGIIVTLFLWFSASITFAHYLTMFNYVST 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YAGLASIM ++FLYML FILG E+NA+++ Y R
Sbjct: 242 -YAGLASIMIAIIFLYMLSAIFILGGEINAAIMFYRTR 278
>gi|118593797|ref|ZP_01551163.1| Ribonuclease BN [Stappia aggregata IAM 12614]
gi|118433592|gb|EAV40257.1| Ribonuclease BN [Stappia aggregata IAM 12614]
Length = 296
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/282 (42%), Positives = 165/282 (58%), Gaps = 2/282 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ +++ ++ DAI HF +DG+AMASH++LS LL++FP ++F A+LA FLG T
Sbjct: 4 RQTVLVIYAVLKDAIGHFARDDGFAMASHVALSGLLAIFPLLIFIASLAAFLGMTGAADT 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V +++F AWP +A P+ EI VL + L T A+AA +FSSNGVEALR +LNRAYR
Sbjct: 64 VSELLFDAWPRSVASPVVREIQNVLTIRRGDLVTFGAVAALWFSSNGVEALRTALNRAYR 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS + RL S G VLL + L+ +F+ V PLA+ ++ F P + LL I R
Sbjct: 124 QHETRSIVLLRLQSIGLVLLGASILLAYTFLVVLAPLAIEGLKVFVPQVETFLLSINVAR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L IGL H LPA + PGV T W++ F Y+ +F+ Y +
Sbjct: 184 YTLAGSLLIIGLFITHWLLPAGHRTFRDLWPGVFATLFMWIIAGSAFGAYLASFANYVST 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNA--SMIIYYWRKKP 281
Y GLA IMT L+FLY+ + FILG ELNA S YW ++
Sbjct: 244 YGGLAGIMTALIFLYICALVFILGGELNAAISRQRRYWHRRK 285
>gi|217976474|ref|YP_002360621.1| ribonuclease BN [Methylocella silvestris BL2]
gi|217501850|gb|ACK49259.1| ribonuclease BN [Methylocella silvestris BL2]
Length = 288
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 163/263 (61%), Gaps = 1/263 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F ++YDA +FV++DGWA++SHI+LS L S+FPF++F LAGFLG+ + ++F
Sbjct: 4 MFHVLYDAAMNFVQDDGWAISSHIALSILTSMFPFLIFVTALAGFLGSADLSQEAVQILF 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WPE +AKP+ E+ VL GL T+ + + YFSS+GVEALRI+LNRAY V E R
Sbjct: 64 QTWPEQVAKPLASEVHNVLTQTRGGLVTLGGVLSIYFSSSGVEALRIALNRAYGVAETRP 123
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
WY+ RL S GYV++ +V L+ ++ V PL F P L L ++ R L
Sbjct: 124 WYVLRLESIGYVMIGAVALLTLTLSVVFAPLIWTIALHFAPHLEPLDRLVTFSRFGIATL 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLA 246
L + L+ VH FLPA + + I PG++FT+ WV G +F Y+ F+ Y T YAGLA
Sbjct: 184 VLLLALVIVHKFLPAGRRTLWQIFPGIVFTFALWVAGGAIFGSYLAEFARNYVTTYAGLA 243
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
S+M LVFLYM+ FI G ELN
Sbjct: 244 SVMIALVFLYMISSIFIAGGELN 266
>gi|49474789|ref|YP_032831.1| ribonuclease RNAse BN transmembrane protein [Bartonella quintana
str. Toulouse]
gi|49240293|emb|CAF26771.1| Ribonuclease RNAse bn transmembrane protein [Bartonella quintana
str. Toulouse]
Length = 284
Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 173/275 (62%), Gaps = 1/275 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R+ F + ++ DA+ H+ ++G A ASH++LS LL+ FPF +FG +LA F A + P
Sbjct: 2 LRDIFWYSYRVLVDAVSHYWRDNGSAFASHVALSGLLAFFPFFIFGTSLASFSSAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ EI+ VL + G+ T+S + AAYF+SNG+EALR +LN+AY
Sbjct: 62 QKIKALVQLLPDVIAEPLSKEIINVLTIQRGGVLTVSVIGAAYFASNGIEALRTALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS R S +V++ ++ LV++SF+ + PL + ++ + + +I
Sbjct: 122 RVVDRRSLLFCRFQSLFFVIVGAIGLVVISFLLILAPLLIKIMQNHSFFITEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LF+ L+ VH +LPA + K + ILPG++ T W + ++ F HY+ F+ ST
Sbjct: 182 RYIIAAVVLFVSLLIVHKWLPAGRRKFIDILPGIVVTMFVWFMASIAFAHYLTMFNYIST 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
YAGL SIM ++FLYML FILG E+NA++I Y
Sbjct: 242 -YAGLTSIMVAIIFLYMLSAIFILGGEINAAIIFY 275
>gi|27376485|ref|NP_768014.1| hypothetical protein bll1374 [Bradyrhizobium japonicum USDA 110]
gi|27349625|dbj|BAC46639.1| bll1374 [Bradyrhizobium japonicum USDA 110]
Length = 297
Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 170/269 (63%), Gaps = 4/269 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ ++ DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGF G+ + ++
Sbjct: 7 IYVVVMDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFFGSKELADQAASLML 66
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP+ +A ++ EI VL G+ TI A + YF+SNGVEALR++LNRAY VVEMR
Sbjct: 67 EVWPKQVADSLSGEIHDVLTTTRTGVLTIGAALSVYFASNGVEALRVALNRAYAVVEMRR 126
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL--GNLLLIIWNGRIYAT 185
WY RL S GY L+A+ T + M+F+ V PL + R+ P N ++ W R T
Sbjct: 127 WYWLRLESIGYTLVAAFTALAMAFLIVLGPLIIEATRRHIPLFVESNESILTWL-RYGIT 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAG 244
+ AL + LI +H ++PA + + ILPG++FT ++ ++ ++F Y+ F + Y TMYAG
Sbjct: 186 IGALVVALIILHAWVPAGRRSFLQILPGIVFTMVASLISGIVFGQYLARFANNYVTMYAG 245
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
LAS++ LVFLY + F+ G ELNA++I
Sbjct: 246 LASVIIALVFLYFIAAIFVYGGELNAAII 274
>gi|49476272|ref|YP_034313.1| ribonuclease RNAse BN transmembrane protein [Bartonella henselae
str. Houston-1]
gi|49239080|emb|CAF28383.1| Ribonuclease RNAse bn transmembrane protein [Bartonella henselae
str. Houston-1]
Length = 284
Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 175/275 (63%), Gaps = 1/275 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F + I+ DA+ H+ ++G A ASH++LS LL++FPF +FGA+LA F+GA + P
Sbjct: 2 LKRIFWYSYRILVDAVSHYWRDNGSAFASHVALSGLLALFPFFIFGASLASFIGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ +I+ VL + +G+ T+S + AAYF+SNGVEALR +LN+AY
Sbjct: 62 QKIKALLQLLPDVIAEPLSQDIVNVLTIQRRGVLTVSVIGAAYFASNGVEALRTALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS R S +V+L + LV++SF+ + PL + ++ + + +I
Sbjct: 122 RVVDRRSLLFCRFQSLFFVILGAFGLVVISFLLILAPLIIKIMQDHSFFITEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LF+ L+ VH +LPA + K + +LPG++ T W + ++ F Y+ F ST
Sbjct: 182 RYIIAAVVLFVSLLIVHKWLPAERRKFIDVLPGIVVTMSVWFMASLAFAQYLTMFDYIST 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
YAGLASIM ++FLY+L FILG E+NA+++ Y
Sbjct: 242 -YAGLASIMVAIIFLYILSAIFILGGEINAAIMFY 275
>gi|240851358|ref|YP_002972761.1| ribonuclease RNAse BN transmembrane protein [Bartonella grahamii
as4aup]
gi|240268481|gb|ACS52069.1| ribonuclease RNAse BN transmembrane protein [Bartonella grahamii
as4aup]
Length = 288
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 172/275 (62%), Gaps = 1/275 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F + I+ DA+ H+ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P
Sbjct: 2 LRNIFWYSYRILVDAVSHYWRDNGSAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ EI+ VL + G+ T+S + AAYF+SNGVEALR +LNRAY
Sbjct: 62 QKIKALVQLLPDVIAEPLSQEIINVLTIQRGGVLTVSVIGAAYFASNGVEALRTALNRAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS R S +V+L +V L+++S + + PL + ++ + + +I
Sbjct: 122 RVVDRRSLLFCRFQSLFFVILGAVGLIVISVLLILTPLLIKIMQNHPFFITEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LF+ L+ VH +LPA + K + ILPG++ T W + ++ F Y+ F ST
Sbjct: 182 RYIIAAVVLFVSLLIVHKWLPAERRKFIDILPGIVLTMFVWFMASIAFAQYLTMFDYIST 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
YAGLASIM ++FLY+L FILG E+NA+++ +
Sbjct: 242 -YAGLASIMVAIIFLYILSAIFILGGEINAAIMFH 275
>gi|92118944|ref|YP_578673.1| ribonuclease BN [Nitrobacter hamburgensis X14]
gi|91801838|gb|ABE64213.1| ribonuclease BN [Nitrobacter hamburgensis X14]
Length = 297
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 172/268 (64%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+ + DA F+ +DGWA+ASHI+LSAL+++FPF++ +LAGFLG+ +++
Sbjct: 7 VYRVGTDAFYTFLADDGWAIASHIALSALMALFPFLIVLTSLAGFLGSKGLADQAAELMI 66
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP+ +A ++ EI VL + T+ A+ A YF+SNGVE+LR++LNRAY V+E R
Sbjct: 67 QIWPDQVANALSGEIHDVLTTTRRDALTVGAVLAVYFASNGVESLRVALNRAYAVIEPRR 126
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATM 186
WY RL S GY L+A+VT + M+F+ V PL +A +++ P + + N R T+
Sbjct: 127 WYWLRLESIGYTLVAAVTALAMAFLIVLGPLIIAAAKRYIPLIVESNESLLNIARYGITV 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGL 245
+A+FI L+ +H +LPA + + I+PG+IFT ++ + + F Y+ F + Y TMYAGL
Sbjct: 187 IAMFIALVILHAWLPAGRRSFLQIIPGIIFTMLASLASGIGFGLYLARFANNYVTMYAGL 246
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
AS++ LVFLY + F+ G ELNA++I
Sbjct: 247 ASVVIALVFLYFIAAIFVFGGELNAAII 274
>gi|319406347|emb|CBI79984.1| ribonuclease RNAse bn transmembrane protein [Bartonella sp. AR
15-3]
Length = 286
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 173/272 (63%), Gaps = 1/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I +A+ H++ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P I+ +
Sbjct: 10 YHIFCNAVSHYLRDNGNAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTPQKIEALVQ 69
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ IA+P++ EI+ VL L T+S + AAYF+SNGV ALR +LN+AYRV++ RS
Sbjct: 70 LLPDAIAEPLSKEIITVLTTQRGDLLTLSVIGAAYFASNGVSALRAALNKAYRVIDRRSL 129
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R S +V++ ++ LV++SF+ V PL + ++ + + + +I R ++
Sbjct: 130 FFCRFQSLFFVIIGTIGLVVISFLLVLAPLLIKIMQNYPCHITEYISMIRLWRYVIAIIV 189
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF L+ VH +LPA + K++ ILPG++ T W + ++ F Y++ F+ Y++ YAGL SI
Sbjct: 190 LFTSLLIVHKWLPAGQRKVIDILPGILVTIFVWFLTSIAFAQYLIMFN-YTSTYAGLTSI 248
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M ++FLY+L FILG E+NA++I Y K
Sbjct: 249 MIAIIFLYILSAIFILGGEINAAIIFYRDHSK 280
>gi|154244265|ref|YP_001415223.1| putative ribonuclease BN [Xanthobacter autotrophicus Py2]
gi|154158350|gb|ABS65566.1| putative ribonuclease BN [Xanthobacter autotrophicus Py2]
Length = 300
Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/270 (44%), Positives = 164/270 (60%), Gaps = 9/270 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I DA F +DGWA+ASHI+LSAL+S+FPF++F LAGFL I ++
Sbjct: 13 IIHIPLDAFWTFAADDGWAIASHIALSALMSLFPFLIFVTALAGFLNLQPLANETIQLIL 72
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP+ +A PI+ EI V+ + T + A YFSSNG+E+LRI LNRAY V EMRS
Sbjct: 73 ETWPQQVAGPISREIYNVVNQVRTDVLTYGVVLAIYFSSNGIESLRIGLNRAYGVKEMRS 132
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPL----ALAYVRKFFPALGNLLLIIWNGRIY 183
WY RL S GYVLLA+V+++ +SF+ V PL A+A V P G + LI R
Sbjct: 133 WYWLRLESIGYVLLAAVSMLALSFLVVLGPLLWQAAVAQVPALAPFSGAITLI----RFG 188
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMY 242
AT + L + L+ HL+LPA + + + PG++ T + W+V A F Y+ F + Y + Y
Sbjct: 189 ATAIILVVSLVVAHLWLPAGRRSLAEVAPGILVTLVLWLVAATAFGFYLAEFPANYVSTY 248
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
AGLAS+M LVFLY+ F+ G ELNA++
Sbjct: 249 AGLASVMIALVFLYLTASIFVFGGELNAAI 278
>gi|319899464|ref|YP_004159561.1| ribonuclease RNAse bn transmembrane protein [Bartonella
clarridgeiae 73]
gi|319403432|emb|CBI77000.1| ribonuclease RNAse bn transmembrane protein [Bartonella
clarridgeiae 73]
Length = 284
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 175/275 (63%), Gaps = 1/275 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ F + I +A+ H++ ++G A ASH++LS LL+ FPF +FG +LA FLGA ++ P
Sbjct: 2 IKKAFWYSYRIFVNAVSHYLRDNGNAFASHVALSGLLAFFPFFIFGTSLASFLGAFKYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I+ + P+ IA+P++ EI+ VL L T+S + AAYF+SNGV ALRI+LN+AY
Sbjct: 62 QKIEALVQLLPDAIAEPLSKEIITVLTTQRGDLLTLSVIGAAYFASNGVGALRIALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV++ RS + R S +V++ +V LV +SF+ V PL + ++ + + + II
Sbjct: 122 RVIDRRSLFFCRFQSLFFVIIGTVGLVAISFLLVLAPLLIKIMQNYSSHITEYIGIIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ L L+ VH +LPA + K++ ILPG++ T W + ++ F Y+ F+ Y++
Sbjct: 182 RYIIAIVVLLTSLLIVHKWLPAGQRKLIDILPGILVTIFVWFLTSIAFAQYLTMFN-YTS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
YAGL SIM ++FLY+L FILG E+NA+++ Y
Sbjct: 241 TYAGLTSIMVAIIFLYILSAIFILGGEINAAIMFY 275
>gi|75674946|ref|YP_317367.1| ribonuclease BN [Nitrobacter winogradskyi Nb-255]
gi|74419816|gb|ABA04015.1| ribonuclease BN [Nitrobacter winogradskyi Nb-255]
Length = 297
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 168/268 (62%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ I DA F+ +DGWA+ASHI+LSAL+++FPF++ LAGF G+ + D++
Sbjct: 7 LYTIGTDAFYTFLADDGWAIASHIALSALMALFPFLIVLTALAGFFGSKELADQAADLML 66
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP+ +A ++ EI VL T+ + A YF+SNGVE+LR++LNRAY V+E R
Sbjct: 67 QIWPDQVANTLSREIHDVLTTSRGDALTVGLVLAVYFASNGVESLRVALNRAYAVIEPRR 126
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATM 186
WY RL S GY L+A+VT + M+F+ V PL +A R+ P + + N R T+
Sbjct: 127 WYWLRLESIGYTLVAAVTTLAMAFLIVLGPLIIAAARRHVPLIVESNESLLNIARYGITI 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGL 245
LA+F L+ +H +LPA + + I+PG+IFT ++ ++ V F Y+ F + Y TMYAGL
Sbjct: 187 LAMFTALVILHAWLPAGRRSFVQIIPGIIFTMLASLISGVGFGLYLARFANNYVTMYAGL 246
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
AS++ LVFLY + F+ G ELNA++I
Sbjct: 247 ASVIIALVFLYFIAAIFVFGGELNAAII 274
>gi|182680153|ref|YP_001834299.1| ribonuclease BN [Beijerinckia indica subsp. indica ATCC 9039]
gi|182636036|gb|ACB96810.1| ribonuclease BN [Beijerinckia indica subsp. indica ATCC 9039]
Length = 302
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/274 (40%), Positives = 162/274 (59%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + +A FVE+DGWA+ASHI+LSAL S+FPF++F LA FLG+ + +F
Sbjct: 17 ILSLFLEAFYRFVEDDGWAIASHIALSALTSMFPFLIFVTALAAFLGSQNLPEEAVTFLF 76
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP +A P+ EI VL GL T+S + A YFSS+GVEALRI+LNRAY V ++R
Sbjct: 77 NTWPAEVAGPLAQEIHNVLTQARGGLLTLSVVLAIYFSSSGVEALRIALNRAYDVKDVRP 136
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
WY+ RL S YV + + L+ + + V PL + +F P + L + R
Sbjct: 137 WYLLRLESIVYVFIGAFGLLTFALLIVLAPLIWEIILRFAPGMAPLQQYVTVLRFSIVTA 196
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLA 246
L + L+ +H +LPA + + I+ G++ T++ W+ G + F Y+ F+ Y T YAGLA
Sbjct: 197 ILLLALVIMHKYLPAGRRHLRDIIVGILLTFVLWIAGGMAFGSYLAEFARNYVTTYAGLA 256
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S+M LVF YML FI G ELNA+++ + RK+
Sbjct: 257 SVMIALVFFYMLACIFIYGGELNAAILRHSRRKQ 290
>gi|328542071|ref|YP_004302180.1| ribonuclease rnase bn (Rbn) transmembrane protein [polymorphum
gilvum SL003B-26A1]
gi|326411821|gb|ADZ68884.1| Putative ribonuclease rnase bn (Rbn) transmembrane protein
[Polymorphum gilvum SL003B-26A1]
Length = 291
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/273 (43%), Positives = 172/273 (63%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + I + ++ DA+ HF +DGWAMASH++LS+LL++FP ++F A LAGFLG
Sbjct: 3 LSKRLVIGYRVLGDALGHFNRDDGWAMASHVALSSLLALFPLLIFIAALAGFLGLTGTAA 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V +++F AWPE +A P+ +EI +VL VP L T +AA +F+SNGVEA+R++LNRAY
Sbjct: 63 RVSELIFEAWPEQVAAPVANEIKKVLTVPRGDLLTFGVVAALWFASNGVEAVRVALNRAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV++ R + + RL S VLL S+ L+ +F+ V PLALA +FP L + I
Sbjct: 123 RVIDTRPFVLLRLQSILLVLLCSIGLIAFTFLMVLAPLALAAAHAWFPWLADFAGRINAV 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R A L GLI VH LPA + + + ILPGV T W+ F Y+ ++ Y +
Sbjct: 183 RYGAASLVAVAGLIVVHAVLPAGRRRFVDILPGVAATLALWLAAGAAFGAYLAGYADYVS 242
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
YAGLA +M+ LVFLY++ + ++G ELNA++I
Sbjct: 243 TYAGLAGVMSALVFLYIVALALLIGGELNAALI 275
>gi|316936222|ref|YP_004111204.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
gi|315603936|gb|ADU46471.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
Length = 297
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 165/275 (60%), Gaps = 3/275 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ + + DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGF+G+ +
Sbjct: 1 MRQ-IRTAYAVAVDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFIGSRELAD 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ WP +A ++ EI VL G+ TI L A YF+SNGVE+LR+ LNRAY
Sbjct: 60 QAAELLLDVWPAQVASTLSGEIHDVLTTTRGGVLTIGLLLALYFASNGVESLRVGLNRAY 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-GNLLLIIWN 179
VVE R WY+ RL S GY L+A+ T + M F+ V PL LA R + P L N ++
Sbjct: 120 AVVEPRPWYLLRLESIGYTLVAAFTALAMGFLIVLGPLILATARHYVPVLVQNNEPLLTI 179
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STY 238
R + AL + L +H +LPA + ILPG++FT + ++ V F Y+ F + Y
Sbjct: 180 ARYGIAITALTVALFLLHAYLPAGRRSFKQILPGIVFTIAASLISGVAFGMYLARFANNY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
TMYAGL S++ LVFLY + F+ G ELNA++I
Sbjct: 240 VTMYAGLGSVIIALVFLYFIAAIFVYGGELNAAII 274
>gi|319404860|emb|CBI78461.1| ribonuclease RNAse bn transmembrane protein [Bartonella rochalimae
ATCC BAA-1498]
Length = 275
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 164/260 (63%), Gaps = 1/260 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ H+ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P I+ + P+ IA
Sbjct: 1 MSHYFRDNGSAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTPQKIEALVQLLPDAIA 60
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+P++ EI+ VL L T+S + AAYF+SNGV ALR +LN+AYRV++ RS + R S
Sbjct: 61 EPLSKEIITVLTTQRGDLLTLSVIGAAYFASNGVGALRTALNKAYRVIDRRSLFFCRFQS 120
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+V++ +V LV++SF+ V PL + ++ + + II R ++ LF L+
Sbjct: 121 LFFVIIGTVGLVVISFLLVLAPLLIKIMQNHSSQITEYIGIIRLWRYIIAIVVLFTSLLI 180
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
VH +LPA + K+ ILPG++ T W + ++ F Y+ F+ Y++ YAGL SIM ++FL
Sbjct: 181 VHKWLPAGQRKVRDILPGILVTIFVWFLTSIAFAQYLTMFN-YASTYAGLTSIMVAIIFL 239
Query: 256 YMLGVFFILGAELNASMIIY 275
Y+L FILG E+NA++I Y
Sbjct: 240 YILSAIFILGGEINAAIIFY 259
>gi|85714895|ref|ZP_01045881.1| ribonuclease BN [Nitrobacter sp. Nb-311A]
gi|85698381|gb|EAQ36252.1| ribonuclease BN [Nitrobacter sp. Nb-311A]
Length = 286
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 164/262 (62%), Gaps = 2/262 (0%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGF G+ + ++ WPE
Sbjct: 2 DAFYTFLADDGWAIASHIALSVLMALFPFLIVLTSLAGFFGSKELADQAAQLMLQIWPEQ 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+A ++ EI VL TI + A YF+SNGVE+LR++LNRAY V+E R WY RL
Sbjct: 62 VANTLSSEIHDVLTTSRGDALTIGLVLAVYFASNGVESLRVALNRAYAVIESRRWYWLRL 121
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIG 192
S GY L+A+VT + M+F+ V PL +A ++ P + + N R T+LA+F+
Sbjct: 122 ESIGYTLVAAVTALAMAFLIVLGPLIIAAAKRHIPLIVESNESLLNIARYGITILAMFVA 181
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGLASIMTC 251
L+ +H +LPA + I+PG++FT ++ ++ + F Y+ F + Y TMYAGLAS++
Sbjct: 182 LLILHAWLPAGRRSFRQIIPGIVFTMLASLMSGIGFGLYLARFANNYVTMYAGLASVVIA 241
Query: 252 LVFLYMLGVFFILGAELNASMI 273
LVFLY + F+ G ELNA++I
Sbjct: 242 LVFLYFIAAIFVFGGELNAAII 263
>gi|319407820|emb|CBI81473.1| ribonuclease RNAse bn transmembrane protein [Bartonella sp. 1-1C]
Length = 271
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 164/256 (64%), Gaps = 1/256 (0%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
+ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P I+ + P+ IA+P++
Sbjct: 1 MRDNGSAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTPQKIEALVQLLPDAIAEPLS 60
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
EI+ VL L T+S + AAYF+SNGV ALR +LN+AYRV++ RS + R S +V
Sbjct: 61 KEIITVLTTQRGDLLTLSVIGAAYFASNGVGALRTALNKAYRVIDRRSLFFCRFQSLFFV 120
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
++ +V LV++SF+ V PL + ++ + + + II R ++ LF L+ VH +
Sbjct: 121 IIGTVGLVVISFLLVLAPLLIKIMQNYSSQITEYIGIIRLWRYIIAIVVLFTSLLIVHKW 180
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
LPA + K++ ILPG++ T W + ++ F Y+ F+ Y++ YAGL SIM ++FLY+L
Sbjct: 181 LPAGQRKVIDILPGILVTIFVWFLTSIAFAQYLTMFN-YASTYAGLTSIMVAIIFLYILS 239
Query: 260 VFFILGAELNASMIIY 275
FILG E+NA++I Y
Sbjct: 240 AIFILGGEINAAIIFY 255
>gi|39937810|ref|NP_950086.1| ribonuclease BN [Rhodopseudomonas palustris CGA009]
gi|192293593|ref|YP_001994198.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
gi|39651670|emb|CAE30192.1| putative ribonuclease RNAse BN (RBN) transmembrane protein
[Rhodopseudomonas palustris CGA009]
gi|192287342|gb|ACF03723.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
Length = 297
Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 164/263 (62%), Gaps = 4/263 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
DA+ F+ +DGWA+ASHI+LS L+++FPF++ +LAGF+G+ + + +++ WP
Sbjct: 13 DALYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFVGSRELADSAAELLLDVWPAQ 72
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+A ++ EI VL G+ TI + A YF+SNGVE+LR+ LNRAY V+E R WY+ RL
Sbjct: 73 VASTLSGEIHDVLTTTRGGVLTIGLVLALYFASNGVESLRVGLNRAYAVIEPRPWYLLRL 132
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL--GNLLLIIWNGRIYATMLALFI 191
S GY L+A+ T + M F+ V PL +A R + P L N L+ + R + AL +
Sbjct: 133 ESIGYTLVAAFTALAMGFLIVLGPLIVATARHYVPLLVHDNEPLLTF-ARYGIAITALTV 191
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGLASIMT 250
L +H +LPA + ILPG++FT + ++ + F Y+ F + Y +MYAGLAS++
Sbjct: 192 ALFLLHAYLPAGRRSFRQILPGIVFTITASLISGMTFGMYLARFANNYVSMYAGLASVII 251
Query: 251 CLVFLYMLGVFFILGAELNASMI 273
LVFLY + F+ G ELNA++I
Sbjct: 252 ALVFLYFIAAIFVYGGELNAAII 274
>gi|115526840|ref|YP_783751.1| ribonuclease BN [Rhodopseudomonas palustris BisA53]
gi|115520787|gb|ABJ08771.1| ribonuclease BN [Rhodopseudomonas palustris BisA53]
Length = 297
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 167/270 (61%), Gaps = 8/270 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+D+ DA F+ +DGWA+ASHI+LS+L+++FPF++ ++AGF+G+ +++
Sbjct: 8 YDVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSIAGFVGSKNLADQAAELMLQ 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
WP +A ++ +I VL TI L A YF+SNGVE+LR++LNRAY VV+MRSW
Sbjct: 68 IWPVQVADALSVQIHDVLTTTRGDALTIGLLLAIYFASNGVESLRVALNRAYAVVDMRSW 127
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL----GNLLLIIWNGRIYA 184
Y RL S GY ++A+ T + M+F+ V PL L R++ P + LL ++ G
Sbjct: 128 YWLRLESIGYTMVAAFTALAMAFLIVLGPLLLETARRYVPLMVESNETLLTVVRYG---I 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYA 243
T+ A+ + L +H +LP + ILPG++FT ++ ++ V F Y+ F S Y TMYA
Sbjct: 185 TIAAMTVALFILHAWLPCGRRTFRQILPGIVFTMLASLLSGVGFGMYLARFASNYVTMYA 244
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
GLAS++ LVFLY + F+ G ELNA++I
Sbjct: 245 GLASVIIALVFLYFIAAIFVYGGELNAAII 274
>gi|254472479|ref|ZP_05085879.1| YihY family protein [Pseudovibrio sp. JE062]
gi|211958762|gb|EEA93962.1| YihY family protein [Pseudovibrio sp. JE062]
Length = 296
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 166/271 (61%), Gaps = 12/271 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA+ HF +DG+A+ASH++LS+L+++FPF++F A +GFLG + + +++F
Sbjct: 11 YQVLADALGHFNSDDGYAVASHVALSSLMALFPFLIFVAAFSGFLGLNSVAQSATELIFD 70
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
WPE +A P++ EI VL P L T + +FSSNGVEA+R+ LNRAYRV + RSW
Sbjct: 71 VWPERVAGPVSGEIKAVLTQPRGDLLTFGVVVTLWFSSNGVEAMRVGLNRAYRVRDNRSW 130
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLA------LAYVRKFFPALGNLLLIIWNGRI 182
+ R S VL+ + L++ +F+ V PLA LA V + F N++ R
Sbjct: 131 FFCRTQSILAVLIGTAVLMVSTFLIVFGPLAWEWAVHLAPVMEKFSYKANIV------RY 184
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T L L L+ H++LPA + + + +LPG+ T I W+V F Y+ ++ Y ++Y
Sbjct: 185 GITSLLLLFALLAAHMYLPAGRRRFLEVLPGIALTMILWIVAGTAFGAYLARWANYVSLY 244
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
AGLA IMT ++F+Y+ V FILG E NA+++
Sbjct: 245 AGLAGIMTAIIFMYLTAVIFILGGEFNAALM 275
>gi|298293398|ref|YP_003695337.1| ribonuclease BN [Starkeya novella DSM 506]
gi|296929909|gb|ADH90718.1| ribonuclease BN [Starkeya novella DSM 506]
Length = 277
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/266 (43%), Positives = 158/266 (59%), Gaps = 3/266 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FDI +DA FVE+DGWA++SHI+LSAL+S+FPF++F LA F + ++
Sbjct: 5 FDIAWDAFWRFVEDDGWAISSHIALSALMSLFPFLIFVTALAAFFDLKTLADETVQLMLE 64
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
AWP +A PI EI VL + TI + A YFSSNG+E+LRI LNRAY V E R+W
Sbjct: 65 AWPAQVAAPIGREIRNVLTQVRTDVLTIGVVLAIYFSSNGIESLRIGLNRAYGVRESRAW 124
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIP-LALAYVRKFFPALGNLLLIIWNGRIYATML 187
Y RL S GYV++ + L+ +SF+ V P L LA VR + PAL +I R AT
Sbjct: 125 YWLRLESIGYVVVGAAGLLALSFLVVLGPVLWLAAVR-WVPALQPFGWVITFLRYAATSA 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGLA 246
L + L+ H++LPA + + + PG++ T W+ F Y+ F + Y T YAGLA
Sbjct: 184 ILIVALVVAHVWLPAGRRTLAEVAPGILVTLGLWLAAGAAFGRYLAEFANNYVTTYAGLA 243
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
S+M LVFLY F+ G ELNA++
Sbjct: 244 SVMIALVFLYTTASIFVYGGELNAAI 269
>gi|158426274|ref|YP_001527566.1| ribonuclease BN [Azorhizobium caulinodans ORS 571]
gi|158333163|dbj|BAF90648.1| ribonuclease BN [Azorhizobium caulinodans ORS 571]
Length = 324
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/267 (40%), Positives = 163/267 (61%), Gaps = 1/267 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ DA+ F+ +DGWA+ASHI+LS L+S+FPF++F LAGFL I ++
Sbjct: 33 TYRVVMDAVWTFLADDGWAIASHIALSILMSLFPFLIFLTALAGFLDLRPLANEAIQLIL 92
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP+ +A+PI EI V+ + T+ A YFSSNG+E+LRI LNRAY + E R+
Sbjct: 93 ETWPDAVAEPIAREIHNVVNQVRADVLTVGVALAIYFSSNGIESLRIGLNRAYGMKEHRA 152
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
WY R+ S +VL+ + ++ +SF+ + PL + PAL + ++ R +T L
Sbjct: 153 WYRLRVSSVLFVLVGAAGMLALSFLVILGPLIWQTMVNNVPALKPISGVVTFARFASTAL 212
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYAGLA 246
L I L+ HL+LPA + +++ +LPG+ T W+V A +F Y+ FS+ Y T YAGLA
Sbjct: 213 ILIIALLMAHLWLPAGRRRLLDVLPGIGVTLTLWLVAATVFGIYLGEFSSNYVTTYAGLA 272
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
S+M LVFLY+ FI G ELNA+++
Sbjct: 273 SVMIALVFLYLTATAFIFGGELNAAIL 299
>gi|91975407|ref|YP_568066.1| ribonuclease BN [Rhodopseudomonas palustris BisB5]
gi|91681863|gb|ABE38165.1| ribonuclease BN [Rhodopseudomonas palustris BisB5]
Length = 297
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 164/270 (60%), Gaps = 6/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+ + DA F+ +DGWA+ASHI+LS+L+++FPF++ +LAGF G+ +++
Sbjct: 7 VYAVGMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSLAGFFGSKDLADQAAELLL 66
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP +A ++ EI VL G TI + A YF+SNGVE+LR++LNRAY V+E+R
Sbjct: 67 DIWPAQVASTLSGEIHDVLTTTRGGALTIGLVLALYFASNGVESLRVALNRAYAVIEVRP 126
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL---GNLLLIIWNGRIYA 184
WY+ RL S GY L+A+ T + M+F+ V PL LA R + P L LL + R
Sbjct: 127 WYLLRLESIGYTLVAAFTALAMAFLIVLGPLILATARHYVPLLVEDNQTLLTV--ARYGI 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYA 243
T+ AL + L+ +H LPA + I PG+ FT ++ + + F Y+ F + Y TMYA
Sbjct: 185 TIGALILALVILHARLPAGHRTLKQIAPGIAFTIVASLASGMGFGFYLARFANNYVTMYA 244
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
GLAS++ LVFLY + F+ G ELNA++I
Sbjct: 245 GLASVIIALVFLYFIAAIFVYGGELNAAII 274
>gi|86747942|ref|YP_484438.1| ribonuclease BN [Rhodopseudomonas palustris HaA2]
gi|86570970|gb|ABD05527.1| Ribonuclease BN [Rhodopseudomonas palustris HaA2]
Length = 297
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 163/270 (60%), Gaps = 6/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+ + DA F+ +DGWA+ASHI+LS+L+++FPF++ ++AGF G+ +++
Sbjct: 7 VYAVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSVAGFFGSKDLADQAAELML 66
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP +A ++ EI VL TI L A YF+SNGVE+LR++LNRAY V+EMR
Sbjct: 67 QIWPAQVASTLSGEIHDVLTTTRGDALTIGLLLALYFASNGVESLRVALNRAYAVIEMRP 126
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL---GNLLLIIWNGRIYA 184
WY+ RL S GY L+A+ T + M+F+ V PL LA R + P + LL + R
Sbjct: 127 WYMLRLESIGYTLVAAFTALAMAFLIVLGPLILATARHYVPLMVEDNQTLLTV--ARYGI 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYA 243
T+ AL + L +H LPA + I+PG+ FT ++ + V F Y+ F + Y TMYA
Sbjct: 185 TVGALILALFILHARLPAGHRTVKQIVPGIAFTVVASLASGVGFGLYLARFANNYVTMYA 244
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
GLAS++ LVFLY + F+ G ELNA++I
Sbjct: 245 GLASVIIALVFLYFIAAIFVYGGELNAAII 274
>gi|218460242|ref|ZP_03500333.1| putative ribonuclease protein [Rhizobium etli Kim 5]
Length = 150
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 113/142 (79%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLA 142
RV E R+WY TRL S GYVL+A
Sbjct: 121 RVQETRAWYFTRLASLGYVLIA 142
>gi|90426354|ref|YP_534724.1| ribonuclease BN [Rhodopseudomonas palustris BisB18]
gi|90108368|gb|ABD90405.1| ribonuclease BN [Rhodopseudomonas palustris BisB18]
Length = 297
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 159/262 (60%), Gaps = 2/262 (0%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
DA F+ +DGWA+ASHI+LS+L+++FPF++ +LAGF G+ +++ WP
Sbjct: 13 DAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSLAGFFGSKGLADQAAELMLQVWPIQ 72
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+A ++ EI VL TI L A YF+SNG+E+LR++LNRAY V E RSWY RL
Sbjct: 73 VADALSGEIHDVLTTTRGDALTIGLLLAIYFASNGIESLRVALNRAYAVTETRSWYWLRL 132
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA-TMLALFIG 192
S GY L+A+ T + M+F+ V PL LA R++ P + + N Y T+ L I
Sbjct: 133 ESIGYTLVAAFTALAMAFLIVLGPLLLAAARRYVPLVIEDNATLLNVTRYGITITVLIIA 192
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGLASIMTC 251
L +H +LP + ILPG+IFT ++ ++ + F Y+ F S Y TMYAGLAS++
Sbjct: 193 LFLLHAWLPCGRRTFWQILPGIIFTMVASLLSGIGFGMYLARFASNYVTMYAGLASVIIA 252
Query: 252 LVFLYMLGVFFILGAELNASMI 273
LVFLY + F+ G ELNA++I
Sbjct: 253 LVFLYFIAAIFVYGGELNAAII 274
>gi|121601639|ref|YP_988389.1| YihY family protein [Bartonella bacilliformis KC583]
gi|120613816|gb|ABM44417.1| YihY family protein [Bartonella bacilliformis KC583]
Length = 285
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 173/279 (62%), Gaps = 1/279 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + I+ +AI H+ DG A ASH++LS LL+ FPF +FG AGF+GA + P
Sbjct: 1 MIRNISLCYHILINAISHYWRGDGSAFASHVALSGLLAFFPFFIFGTFFAGFIGAFTYTP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+ I KP+ EI+ VL + + + T+S AAYF+SNG+EALR +LN+AY
Sbjct: 61 QKIAALVQLLPDAITKPLMKEIINVLTIQRRDVLTLSVFGAAYFASNGIEALRTALNKAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS+ R S +V++ ++ LV++SF V P+ + +++ P + + +I
Sbjct: 121 RVVDYRSFIFCRFQSLFFVIIGAIGLVVISFSLVLAPVLVKMMQQHSPFITEYVGVIRLW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYS 239
R ++ I L+ VH +LPA K K++ ILPG++ T +W + ++ F HY+ +T Y
Sbjct: 181 RYTIAIVISLISLLIVHKWLPAGKRKLIDILPGIVVTMFAWFLASMAFAHYLNLTMLNYV 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ YAGLASIM ++FLYML FILG E+NA++++Y R
Sbjct: 241 STYAGLASIMVAIIFLYMLSAIFILGGEINAAIMLYRDR 279
>gi|323138225|ref|ZP_08073297.1| ribonuclease BN [Methylocystis sp. ATCC 49242]
gi|322396477|gb|EFX99006.1| ribonuclease BN [Methylocystis sp. ATCC 49242]
Length = 281
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 155/259 (59%), Gaps = 2/259 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
YDA F +DGWA+ASHI+LS L ++FPF++F LAGF G + ++F AWP
Sbjct: 8 YDAYLKFERDDGWAIASHIALSTLTALFPFLIFITALAGFFGRQEVADAAAKIIFEAWPP 67
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
IA P++ E+ VL P G+ TI A+ YF+S+GVEALR++LNRAY + R W+ R
Sbjct: 68 RIAGPLSAEVQSVLTEPRHGMATIGAVLGIYFASSGVEALRVALNRAYDARDQRPWWWLR 127
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF-I 191
L + +V + + +L+ + F+ V PLA A + PAL + L ++ Y A+ +
Sbjct: 128 LEAIVFVFIGAASLLAIGFLLVLAPLARAIATQHAPALMHELEPLYAPVRYGVTTAVVSV 187
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLASIMT 250
L+ H+FLPA + + I+PG T ++ + LF Y+ F+ +Y + YAGLASIM
Sbjct: 188 ALLAAHVFLPAGQRPLARIVPGFALTLLASLACGALFGAYLAEFAGSYVSTYAGLASIMM 247
Query: 251 CLVFLYMLGVFFILGAELN 269
LVFLY L V FI GAELN
Sbjct: 248 ALVFLYSLAVIFIYGAELN 266
>gi|163869287|ref|YP_001610543.1| ribonuclease RNAse BN transmembrane protein [Bartonella tribocorum
CIP 105476]
gi|161018990|emb|CAK02548.1| ribonuclease RNAse bn transmembrane protein [Bartonella tribocorum
CIP 105476]
Length = 283
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 169/275 (61%), Gaps = 1/275 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F + I DAI H+ + G A ASH++LS LL+ FPF +FG A FLGA + P
Sbjct: 2 LKNIFWYSYRIFGDAISHYWRDSGSAFASHVALSGLLAFFPFFIFGTFFARFLGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ EI+ VL + G+ T+S + AYF+SNG+EALR +LN+AY
Sbjct: 62 QKIKALVQLLPDVIAEPLSQEIVNVLTLHQGGVLTLSIIGTAYFASNGIEALRTALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RSW+ R S +V+L + LV+MSF+ + PL + ++ + + +I
Sbjct: 122 RVTDRRSWFFCRFQSLFFVILGAFGLVVMSFLLILAPLLIKIMQNHPFFMTEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ LFI L+ VH +LPA + K + ILPG++ T W + ++ F Y+ F ST
Sbjct: 182 RYTIAVVILFISLLIVHKWLPAGQRKFIDILPGIVVTMFVWFMASLAFAQYLTMFDYIST 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
YAGLASIM ++FLY+L FILG E+NA+++ Y
Sbjct: 242 -YAGLASIMVAIIFLYILSAIFILGGEINAAIMFY 275
>gi|23010564|ref|ZP_00051208.1| COG1295: Predicted membrane protein [Magnetospirillum
magnetotacticum MS-1]
Length = 310
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 157/267 (58%), Gaps = 1/267 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
VFD+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG G+ ++F
Sbjct: 17 VFDVAGLAAQRFVAHDGWAIASHIALSMLTSLFPFLILVAALAGLFGSKSLADEAGTLIF 76
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY + EMR
Sbjct: 77 DAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGIREMRP 136
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W++TRL S GYV+ + ++ +F+ V PL + P L L L + GRI T +
Sbjct: 137 WWLTRLESIGYVVCGAFAMLAFAFLVVLGPLIWRQLVFVAPGLEPLGLTVAIGRIVITAV 196
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYAGLA 246
+ + L+ H F+ A + +S++PG+ T W + + F Y+ FS Y++ Y GLA
Sbjct: 197 LIAMVLVIAHKFVAAGRRPFLSVMPGIAVTLGLWFLAGLGFGFYLDRFSNAYASTYGGLA 256
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+ M LVFLY L F+ G E+N ++I
Sbjct: 257 TAMIFLVFLYWLAAMFLFGGEVNGTVI 283
>gi|220924378|ref|YP_002499680.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
gi|219948985|gb|ACL59377.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
Length = 293
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 153/266 (57%), Gaps = 1/266 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F+I A + FV DGWA+ASHI+LS L S+FPF++ LA G+ +++F
Sbjct: 7 FEIAAIAAQRFVAHDGWAIASHIALSLLTSLFPFLILLTALASVFGSKSLADEASNLLFE 66
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
WP +A P+ E+ +VL GL T+ AL A YFSS+GVE+LR+ LNRAY + E+R W
Sbjct: 67 VWPSEVAGPVATEVHRVLTEQRGGLLTVGALLALYFSSSGVESLRVGLNRAYGLREVRPW 126
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++TRL S GYV+ A+ ++ +F+ V PL + P L L L I R++ T L
Sbjct: 127 WLTRLESIGYVICAAFAMLAFTFLVVLGPLMWRGLILVAPGLEPLGLTIAVVRVFLTALL 186
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLAS 247
+ + L+ H F+ A + +LPGV T WV+ + F Y+ FS Y + Y GLA+
Sbjct: 187 IALVLVIAHKFIAAGRRPWHMVLPGVAVTLGMWVLAGLGFGMYLDRFSGAYVSTYGGLAT 246
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
M LVFLY L F+ G E+N ++I
Sbjct: 247 AMVFLVFLYWLAAMFLFGGEINGTII 272
>gi|170750736|ref|YP_001756996.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170657258|gb|ACB26313.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 295
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 154/260 (59%), Gaps = 1/260 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A + FV DGWA+ASHI+LS+L S+FPF++ A LAG G ++F AWP I
Sbjct: 4 AAQRFVSHDGWAIASHIALSSLTSLFPFLILLAALAGLFGTQSLADEAGVLIFDAWPREI 63
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
AKPI E+ +VL G+ T+ AL A YFSS+GVE+LR+ LNRAY + E R W++TRL
Sbjct: 64 AKPIVGEVHRVLTEQRSGVLTLGALFALYFSSSGVESLRVGLNRAYGLRESRPWWLTRLE 123
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
S GYV+ + ++ + + V PL V P L L L + GRI T L L + L+
Sbjct: 124 SIGYVICGAFAMLAFALLVVLGPLIWRNVVLVAPGLEPLSLTVAIGRIAVTALLLAVVLV 183
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYAGLASIMTCLV 253
H F+ A + I+S+LPG+ T + W + F +Y+ FS Y++ Y GLA+ M LV
Sbjct: 184 IAHKFVAAGRRSILSVLPGIGVTLVLWFFAGLGFGYYLDRFSNAYASTYGGLATAMVFLV 243
Query: 254 FLYMLGVFFILGAELNASMI 273
FLY L F+ G E+N ++I
Sbjct: 244 FLYWLAAMFLFGGEINGTVI 263
>gi|299132223|ref|ZP_07025418.1| ribonuclease BN [Afipia sp. 1NLS2]
gi|298592360|gb|EFI52560.1| ribonuclease BN [Afipia sp. 1NLS2]
Length = 294
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 158/275 (57%), Gaps = 5/275 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F I DA F+ +DGWA+ASHI+LSAL++ FPF++ A+LAGFLG+ ++
Sbjct: 8 FQIGIDAFNAFLADDGWAIASHIALSALMAFFPFLIVLASLAGFLGSKDLADQAAGLMLQ 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
WP A + +I VL T+ + + YFSSNGVE+LR+ LNRAY V E R W
Sbjct: 68 VWPSQAADALVTQIHDVLTQTRGDALTLGLVLSVYFSSNGVESLRVGLNRAYGVTETRPW 127
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
Y RL S GY L+A++ ++++ + V PL LA R + P + + N YA L
Sbjct: 128 YWLRLESIGYTLIAALISLVLALLLVLGPLLLATARYYLPLIIEPKAHLLNFSRYAIALV 187
Query: 189 LFIGLIFV-HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGLA 246
+ +FV H +LPA + I+PG+ FT I+ +V A F Y+ F + Y T YAGLA
Sbjct: 188 SLVSALFVLHAWLPAGHRTLRQIMPGIAFTVIASLVSAAGFGQYLARFANNYVTTYAGLA 247
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S++ LVFLY + FI G LNA++I RK+P
Sbjct: 248 SVVIALVFLYFIAAIFIFGGALNAAII---RRKQP 279
>gi|170742693|ref|YP_001771348.1| ribonuclease BN [Methylobacterium sp. 4-46]
gi|168196967|gb|ACA18914.1| ribonuclease BN [Methylobacterium sp. 4-46]
Length = 293
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 151/272 (55%), Gaps = 1/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+I A + FV DGWA+ASHI+LS L S+FPF++ LA G +++F
Sbjct: 7 LEIAAIAAQRFVAHDGWAIASHIALSLLTSLFPFLILLTALASVFGTKSLADEASNLLFE 66
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
WP +A P+ E+ +VL G+ TI AL A YFSS+GVE+LR+ LNRAY + E R W
Sbjct: 67 VWPSEVAGPVAAEVHRVLTEQRGGILTIGALLALYFSSSGVESLRVGLNRAYGLRESRPW 126
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++TRL S GYV+ + ++ +F+ V PL + P + L L I R+ T L
Sbjct: 127 WLTRLESIGYVICGAFAMLAFTFLVVLGPLVWRALVMVAPGIEPLGLTIAVVRVALTALL 186
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYAGLAS 247
+ + L+ H F+ A + +LPGV T WV+ + F Y+ FS+ Y + Y GLA+
Sbjct: 187 IALVLVIAHKFIAAGRRPWHMVLPGVAVTLGMWVIAGLGFGTYLDRFSSAYVSTYGGLAT 246
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
M L+F+Y L F+ G E+N ++I R+
Sbjct: 247 AMVFLIFVYWLAAMFLFGGEVNGTLIAARRRR 278
>gi|188581440|ref|YP_001924885.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179344938|gb|ACB80350.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 317
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/267 (39%), Positives = 157/267 (58%), Gaps = 1/267 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D++ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G ++F
Sbjct: 25 ILDVMGLAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGTKSLADEAGTLIF 84
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY + EMR
Sbjct: 85 DAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGIREMRP 144
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W++TRL S GYV+ + ++ + + V PL + P L L L + GRI T
Sbjct: 145 WWLTRLESIGYVVCGAFAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRIGVTAF 204
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYAGLA 246
+ + L+ H F+ A + ++S+LPG+ T W + + F +Y+ FS Y++ Y GLA
Sbjct: 205 LIALVLVIAHKFVAAGRRPVLSVLPGIAVTLGLWFLAGLGFGYYLDRFSNAYASTYGGLA 264
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+ M LVFLY L F+ G E+N ++I
Sbjct: 265 TAMIFLVFLYWLAAMFLFGGEVNGTVI 291
>gi|240138821|ref|YP_002963296.1| putative ribonuclease RNAse BN [Methylobacterium extorquens AM1]
gi|240008793|gb|ACS40019.1| putative ribonuclease RNAse BN [Methylobacterium extorquens AM1]
Length = 300
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 159/270 (58%), Gaps = 1/270 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + D+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G+
Sbjct: 4 FKKILDVTGIAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGSKSLADEAGT 63
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY + E
Sbjct: 64 LIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGIRE 123
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R W++TRL S GYV+ ++ ++ + + V PL + P L L L + GRI
Sbjct: 124 ARPWWLTRLESIGYVVCGALAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRIGV 183
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYA 243
T + + L+ H F+ A + ++S+LPG++ T W + + F +Y+ FS Y++ Y
Sbjct: 184 TAFLIALVLVIAHKFVAAGRRPVLSVLPGIVVTLCLWFLAGLGFGYYLDRFSNAYASTYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
GLA+ M LVFLY L F+ G E+N ++I
Sbjct: 244 GLATAMIFLVFLYWLAAMFLFGGEINGTVI 273
>gi|163851653|ref|YP_001639696.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218530460|ref|YP_002421276.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|163663258|gb|ABY30625.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218522763|gb|ACK83348.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 315
Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 159/270 (58%), Gaps = 1/270 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + D+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G+
Sbjct: 19 FKKILDVTGIAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGSKSLADEAGT 78
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY + E
Sbjct: 79 LIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGIRE 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R W++TRL S GYV+ ++ ++ + + V PL + P L L L + GRI
Sbjct: 139 ARPWWLTRLESIGYVVCGALAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRIGV 198
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYA 243
T + + L+ H F+ A + ++S+LPG++ T W + + F +Y+ FS Y++ Y
Sbjct: 199 TAFLIALVLVIAHKFVAAGRRPVLSVLPGIVVTLCLWFLAGLGFGYYLDRFSNAYASTYG 258
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
GLA+ M LVFLY L F+ G E+N ++I
Sbjct: 259 GLATAMIFLVFLYWLAAMFLFGGEINGTVI 288
>gi|254561424|ref|YP_003068519.1| ribonuclease RNAse BN [Methylobacterium extorquens DM4]
gi|254268702|emb|CAX24661.1| putative ribonuclease RNAse BN [Methylobacterium extorquens DM4]
Length = 300
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 158/270 (58%), Gaps = 1/270 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + D+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G+
Sbjct: 4 FKKILDVTGIAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGSKSLADEAGT 63
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY + E
Sbjct: 64 LIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGIRE 123
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R W++TRL S GYV+ ++ ++ + + V PL + P L L L + GRI
Sbjct: 124 ARPWWLTRLESIGYVVCGALAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRIGV 183
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYA 243
T + + L+ H F+ A + ++S LPG++ T W + + F +Y+ FS Y++ Y
Sbjct: 184 TAFLIALVLVIAHKFVAAGRRPVLSALPGIVVTLCLWFLAGLGFGYYLDRFSNAYASTYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
GLA+ M LVFLY L F+ G E+N ++I
Sbjct: 244 GLATAMIFLVFLYWLAAMFLFGGEINGTVI 273
>gi|296446755|ref|ZP_06888694.1| ribonuclease BN [Methylosinus trichosporium OB3b]
gi|296255758|gb|EFH02846.1| ribonuclease BN [Methylosinus trichosporium OB3b]
Length = 273
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 141/257 (54%), Gaps = 1/257 (0%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
DA HF E DG+A+ASHI+L+ L+S+FPF++ LA G+ + ++ WP
Sbjct: 6 DAFLHFNEGDGFAIASHIALTTLMSLFPFLIVVTALAATFGSTRLADEAGRLLLDVWPSQ 65
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+A PI EI +V P T AL + YF+S+G+E+LRI LNRAY E R W++ RL
Sbjct: 66 VAAPIAGEIRRVATTPQGSALTAGALFSVYFASSGIESLRIGLNRAYEAQETRPWWLLRL 125
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
S YVL ++V L+I+S + V P+ ++F L + + R L L L
Sbjct: 126 ESIFYVLGSAVALLILSVLVVLWPIVTDVAARWFDWLPSFWTFVTLARFAIATLVLAAAL 185
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYAGLASIMTCL 252
+H +LPA + +I LPGV+ T W++ F Y+ F+ Y YAGLAS M L
Sbjct: 186 FAIHNWLPAGRRRISETLPGVVVTLALWLIAGSAFGAYLSAFAERYVLTYAGLASAMIAL 245
Query: 253 VFLYMLGVFFILGAELN 269
VFLY V FI G ELN
Sbjct: 246 VFLYFTAVIFIYGGELN 262
>gi|99081021|ref|YP_613175.1| ribonuclease BN, putative [Ruegeria sp. TM1040]
gi|99037301|gb|ABF63913.1| ribonuclease BN putative [Ruegeria sp. TM1040]
Length = 288
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 149/264 (56%), Gaps = 4/264 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFV-PTVIDVV 66
I A+ F ++ W ++SHI++S ++++FPF++F +L+G + + H+ V V+++V
Sbjct: 14 IARRALGRFSRKNAWVLSSHIAMSMMMALFPFVLFTVSLSGAIASLFSHRIVVDDVVNLV 73
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
FG+WP+ +A+PIT E+ VL GL T+ + A YF+SNGV+A+RI++ RAY E R
Sbjct: 74 FGSWPQSVAEPITREVYAVLETSGTGLMTLGGVLALYFASNGVDAIRIAMLRAYGQEETR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ RLIS G V+L L++ + + +PL +V +FFP L L
Sbjct: 134 PFWKHRLISLGLVILGGAGLLLTAVFELFLPLGARFVGRFFPDLDFLRGWEQGANGLVVA 193
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + HL L + + +LPG + T + W F Y+ +F++YS YAGLA
Sbjct: 194 VIPVAAVFLYHLVLLPKRETLRHVLPGALVTLVLWWASGAGFAFYVSSFASYSATYAGLA 253
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
M L+FLY+ ILGAE+N
Sbjct: 254 GAMAALIFLYLNAAILILGAEING 277
>gi|163745909|ref|ZP_02153268.1| hypothetical protein OIHEL45_09993 [Oceanibulbus indolifex HEL-45]
gi|161380654|gb|EDQ05064.1| hypothetical protein OIHEL45_09993 [Oceanibulbus indolifex HEL-45]
Length = 311
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 146/259 (56%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++++A+ +D + MA +++ ALL++FPF++F ++L + G +I +
Sbjct: 39 VLHEAVLRLWSDDAFGMAGNVAFRALLAIFPFLIFTSSLTAYFGDRSMADDLIHFLIAIV 98
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + +P+ E+ +V+ VP L ++ L +F+ GV+ +RI LNRAY + E RS +
Sbjct: 99 PPALIEPLVTEVEKVMTVPRGDLLSVGILLTVWFAVGGVDGVRIGLNRAYGLRETRSVFT 158
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ VLLAS+ LVI+ ++ V P A +++ P + + R + L
Sbjct: 159 IYAVQVVMVLLASLILVIVGYLLVLAPRAGSWLHMLMPGFDPGSVTVGLIRFPVSATILL 218
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L H+ LPA ++K +I PGV+ T I+W + A+LF+ Y+ +F+TYS+ YAG+A I+
Sbjct: 219 VALFAAHVILPARRTKFNNIWPGVVATAIAWTLLAMLFSTYLRSFATYSSYYAGMAGIIA 278
Query: 251 CLVFLYMLGVFFILGAELN 269
L F+Y+ + I G ELN
Sbjct: 279 ALYFMYLAALVLIFGGELN 297
>gi|254488995|ref|ZP_05102200.1| YihY family protein [Roseobacter sp. GAI101]
gi|214045864|gb|EEB86502.1| YihY family protein [Roseobacter sp. GAI101]
Length = 316
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 140/249 (56%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+D + +A +++ LL+VFPF++F +++ F+G+ ++ + PE + +PI
Sbjct: 49 SDDAFGLAGNVAFRVLLAVFPFLIFTSSMTAFVGSQSMAEDLVSFLLAIVPETLIEPIVS 108
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
E+ QV+ V G+ + L +F+ GV+ +R+ LNRAY V E RSWY+ + V+
Sbjct: 109 EVKQVMTVQRGGVLSTGILLTIWFALGGVDGVRVGLNRAYGVRETRSWYVVYPVMVLMVI 168
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+AS+ LV++ ++ V P A +++ FP + I R A + L L H+FL
Sbjct: 169 IASLVLVLVGYLLVLAPRAGSWLHVLFPGFDPASVTIRLVRYPAAAIILVFSLFLAHVFL 228
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
PA +++ SI PGV+FT +W V FT Y+ F+TY+T Y GLA I+ L FLY+ +
Sbjct: 229 PARRTRFSSIYPGVLFTVAAWTSLTVAFTFYLANFATYATYYGGLAGIVAALYFLYLAAL 288
Query: 261 FFILGAELN 269
I G ELN
Sbjct: 289 VLIFGGELN 297
>gi|163736480|ref|ZP_02143899.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
gi|163743276|ref|ZP_02150657.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
gi|161383464|gb|EDQ07852.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
gi|161390350|gb|EDQ14700.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
Length = 287
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 158/268 (58%), Gaps = 8/268 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQF---VPTVIDVVF 67
+Y A + F +++GW ++SHI++S +L++FPFI+F L G + GA + ++++VF
Sbjct: 14 LYLAAKRFNDKNGWVLSSHIAMSLMLALFPFILFTVALTGAVAGAFSDGIDLKNLVELVF 73
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G+WP+ ++ PI E+ VLA + G+ T+ + A YF+SNGV+A+R+++ +AY + R
Sbjct: 74 GSWPDSVSDPIVREVYSVLATSSTGVVTLGGVIAIYFASNGVDAVRLAMVQAYHERDHRP 133
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ TR + G V+L ++ + + +PL ++ FFP + L W + ++
Sbjct: 134 FWKTRGLCIGLVILGGAGIMAAAVFELILPLYARHLASFFPQVP--LARNWESGLNGILV 191
Query: 188 AL--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+ I + H+ LPA + + +LPGV+ T + W + F YI +F++YS YAGL
Sbjct: 192 AVIPLIAVCAFHMLLPAKRHRFTQVLPGVLLTVVLWWAAGLAFAIYISSFASYSATYAGL 251
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
A M L+FLY+ ILGAELN ++
Sbjct: 252 AGAMAALIFLYLNSAILILGAELNGVLL 279
>gi|259419076|ref|ZP_05742993.1| YihY family protein [Silicibacter sp. TrichCH4B]
gi|259345298|gb|EEW57152.1| YihY family protein [Silicibacter sp. TrichCH4B]
Length = 287
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 147/264 (55%), Gaps = 4/264 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVV- 66
I+ A+ F ++ W ++SHI++S ++++FPF++F L+G + + H+ V + +
Sbjct: 13 ILRRALGRFGRKNAWVLSSHIAMSMMMALFPFVLFTVALSGAIASLFSHRVVVDDVVDLV 72
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
FG+WP+ +A+PIT E+ VL GL T+ + A YF+SNGV+A+RI++ RAY E R
Sbjct: 73 FGSWPQSVAEPITREVYAVLETSGTGLMTLGGVLALYFASNGVDAIRIAMLRAYGQEETR 132
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ RLIS G V++ L++ + + +PL +V +FFP L L
Sbjct: 133 PFWKHRLISLGLVIMGGAGLLLTAVFELFLPLGARFVARFFPDLDFLRGWEHGANGLVVA 192
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + HL L + + ILPG + T + W +F Y+ +F++YS YAGLA
Sbjct: 193 VIPVAAVFLYHLVLLPRRETVRHILPGAVVTLLLWWAAGTVFALYVSSFASYSATYAGLA 252
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
M L+FLY+ ILGAE+N
Sbjct: 253 GAMAALIFLYLNAAILILGAEING 276
>gi|126737832|ref|ZP_01753562.1| ribonuclease BN, putative [Roseobacter sp. SK209-2-6]
gi|126721225|gb|EBA17929.1| ribonuclease BN, putative [Roseobacter sp. SK209-2-6]
Length = 248
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 145/246 (58%), Gaps = 6/246 (2%)
Query: 33 LSALLSVFPFIVFGANLAGFLG---AHQF-VPTVIDVVFGAWPEVIAKPITDEILQVLAV 88
+S +L++FPF++F LAG + +H+ + ++D+VFGAWP ++ PI E+ VL
Sbjct: 1 MSMMLALFPFVLFTVALAGAVANLVSHELRLQQLVDLVFGAWPTEVSGPILRELYAVLET 60
Query: 89 PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ GL T + A +F+SNGV A+R ++ RAY ++ R ++++RLI G V+L ++I
Sbjct: 61 SSPGLATFGGVLALFFASNGVNAIRFAMVRAYHDLDERPFWLSRLICLGLVILGGSGILI 120
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-FIGLIFVHLFLPAAKSKI 207
+ +AIPL +AY + FP + LL + G A +L + F+ ++ HLFLP I
Sbjct: 121 AAVFEIAIPLYVAYFSELFPQV-ELLNGLGKGMNRALILGMPFLAVLLCHLFLPGRIHPI 179
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
ILPGV+ T W + + F Y+ + + YS YAGLA + ++FLY+ ILGAE
Sbjct: 180 REILPGVLVTAFLWWIAGIGFAFYVTSIAQYSATYAGLAGAIAAIIFLYVNAAILILGAE 239
Query: 268 LNASMI 273
N ++I
Sbjct: 240 FNGALI 245
>gi|86138868|ref|ZP_01057440.1| ribonuclease BN, putative [Roseobacter sp. MED193]
gi|85824515|gb|EAQ44718.1| ribonuclease BN, putative [Roseobacter sp. MED193]
Length = 257
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 145/253 (57%), Gaps = 8/253 (3%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGA--HQFVP--TVIDVVFGAWPEVIAKPITDEI 82
M+SHI++S +L++FPF++F LAG + + Q + ++D+VFG+WPE ++ PI E+
Sbjct: 1 MSSHIAMSMMLALFPFVLFTVALAGTMASVFSQGIDLDHLVDLVFGSWPEPVSTPIVSEL 60
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
VLA + GL T+ A YF+SNGV A+RI++ +AY V+ R ++++R++ G+V+L
Sbjct: 61 NAVLATSSTGLITVGGFLALYFASNGVNAVRIAMVQAYHDVDRRPFWLSRILCIGFVILG 120
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
++ + V +PL L Y+ FFP L L +G + +L F + HL L
Sbjct: 121 GAGILFAALFEVILPLYLHYLADFFPEVELSGYLTSGLHGLV--AVLLPFFAVFLCHLVL 178
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P ++ +LPG + T W + F Y+ + + YS YAGLA M ++FLY+
Sbjct: 179 PGHIHRLSHLLPGTVLTVALWWGAGIGFAFYVGSIAQYSATYAGLAGAMAAMIFLYVNAA 238
Query: 261 FFILGAELNASMI 273
I GAE N ++I
Sbjct: 239 ILIFGAEFNNALI 251
>gi|260428190|ref|ZP_05782169.1| transporter [Citreicella sp. SE45]
gi|260422682|gb|EEX15933.1| transporter [Citreicella sp. SE45]
Length = 313
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 141/254 (55%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+D + +A +++ ++++FPF++F ++L F+G +I + PE + +PI
Sbjct: 49 SDDAFGLAGNVAFRVIMAIFPFLIFTSSLTAFIGTDGMAEDLISFLIAIVPEALIEPIVS 108
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
E+ QV+ V G+ ++ L +F+ GV+ +R+ LNRAY + E R WY+ + V+
Sbjct: 109 EVRQVMTVQRGGVLSLGVLLTIWFALGGVDGIRVGLNRAYGIRETRPWYVLYPLMALMVV 168
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+AS+ LV++ ++ V P A +++ FP + + R + L L L H+ L
Sbjct: 169 IASLVLVLVGYLLVLAPRAGSWLHILFPDFDPASVTVSLVRYPSAALILIASLFLAHVLL 228
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
PA +++ SI PGV+FT +SW+ F+ Y+ F+ Y++ Y GLA I+ L F+Y+ +
Sbjct: 229 PARRTRFSSIYPGVLFTVVSWIALTAAFSFYLGHFAAYASYYGGLAGIIAALYFMYLAAL 288
Query: 261 FFILGAELNASMII 274
I G ELN ++ I
Sbjct: 289 VLIFGGELNRAIRI 302
>gi|254512526|ref|ZP_05124593.1| YihY family protein [Rhodobacteraceae bacterium KLH11]
gi|221536237|gb|EEE39225.1| YihY family protein [Rhodobacteraceae bacterium KLH11]
Length = 286
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 144/259 (55%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A+ F ++G+ M+SH+++S ++++FPF++F LAG L +I+++FGAWP+ +
Sbjct: 19 AVRRFNNKNGFVMSSHVAMSLMMALFPFVLFTVALAGALSQGYVTDELIELIFGAWPQDV 78
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A PI E+ VLA G+ T+ L A YF+SNGV A+R ++ +AY + ++ TRL+
Sbjct: 79 ADPIVSELRAVLAGAGSGVITLGGLLAIYFASNGVAAVRQAMTQAYHDHDSWPFWKTRLL 138
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
V++ ++ ++ V V +P+ V + + L + R T+ +I
Sbjct: 139 CIALVIIGGAAILAIAAVEVVLPVYTRLVSEKTAVDVDHWLSVDRLRWTFTVAVPAGTVI 198
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
HL LP + ++ ILPGV T W G F+ YI F++YS YAGLA M L+F
Sbjct: 199 LAHLVLPTRRHRLPQILPGVALTLALWAAGGWGFSVYIAQFASYSATYAGLAGAMAALIF 258
Query: 255 LYMLGVFFILGAELNASMI 273
LY+ ILGAE N ++I
Sbjct: 259 LYLCSAMLILGAEYNGALI 277
>gi|56696732|ref|YP_167093.1| ribonuclease BN, putative [Ruegeria pomeroyi DSS-3]
gi|56678469|gb|AAV95135.1| ribonuclease BN, putative [Ruegeria pomeroyi DSS-3]
Length = 284
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 143/260 (55%), Gaps = 2/260 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A+ F + G+ M+SH+++S ++++FPFI+F LAG L +I ++FG WPE +
Sbjct: 19 ALMRFQAKSGFVMSSHVAMSMMMALFPFILFTVALAGSLSQDLVTDDLIQLIFGTWPEQV 78
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A PI E+ VLA + T+ + A YF+SNGV+A+R +++RAY E R ++ TRL+
Sbjct: 79 ATPIVAELKAVLAGANSRVMTVGGVLAVYFASNGVDAVREAMSRAYHDAETRPFWKTRLL 138
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
V+ ++ ++ V +P+ V P L + + ++A+ G +
Sbjct: 139 CIAIVVGGGAIVLAVAAFEVVMPIYTRLVTDALPGAAPDWLSV-ERLSWIFVVAMPAGAV 197
Query: 195 F-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
H LPA + + ILPGV+ T + W F+ YI F++YST YAGLA M L+
Sbjct: 198 LACHALLPAGRHPLRRILPGVVLTLVLWAGCGWGFSLYIANFASYSTTYAGLAGAMAALI 257
Query: 254 FLYMLGVFFILGAELNASMI 273
FLY+ ILGAE N +++
Sbjct: 258 FLYLNAAILILGAEFNGALM 277
>gi|260433769|ref|ZP_05787740.1| ribonuclease BN [Silicibacter lacuscaerulensis ITI-1157]
gi|260417597|gb|EEX10856.1| ribonuclease BN [Silicibacter lacuscaerulensis ITI-1157]
Length = 288
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 144/262 (54%), Gaps = 6/262 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A+ F +++G+ M+SH+++S +L++FPF +F +LAG L +I ++FG WP +
Sbjct: 19 AVRRFDDKNGFVMSSHVAMSLMLALFPFALFTVSLAGLLSQDYVTDEMIGLIFGVWPNEV 78
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+PI E+ VL G T+ A+ A YF+SNGV A+R ++N+AY + ++ TRL
Sbjct: 79 AEPIVAELRAVLNGAGSGTITLGAVLAVYFASNGVVAVRAAINQAYHDTDSWPFWKTRLF 138
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG-NLLLIIWNGRIYATMLALFIGL 193
G V+L ++I++ V + +P+ Y R N+ + R+ T L
Sbjct: 139 CLGLVILGGAAILIVAAVELLLPI---YSRLMSEKTSVNVADWLSVERLRWTFAVAVPAL 195
Query: 194 --IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ HL LP + + ILPGV+ T W+ G + F+ YI F+ YS YAGLA M
Sbjct: 196 TVLLAHLVLPVGRHSLRQILPGVLLTLGLWLAGGLAFSLYIGQFARYSATYAGLAGAMAA 255
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L+FLY+ I GAE N +++
Sbjct: 256 LIFLYLSAAIMIFGAEFNGALM 277
>gi|91205490|ref|YP_537845.1| putative ribonuclease BN [Rickettsia bellii RML369-C]
gi|157827145|ref|YP_001496209.1| putative ribonuclease BN [Rickettsia bellii OSU 85-389]
gi|91069034|gb|ABE04756.1| Putative ribonuclease BN [Rickettsia bellii RML369-C]
gi|157802449|gb|ABV79172.1| Putative ribonuclease BN [Rickettsia bellii OSU 85-389]
Length = 281
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 137/273 (50%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F+ +Y A+ +E DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 4 IFNCLYIALFKTIEHDGVEHSGYMSFMVLLSIFPFLVFLLALTSFLGASELGQNFIQIFL 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+VP + L ++ + + + +S+ VE LR LNR Y +
Sbjct: 64 ESMPERATESIEKRIKELLSVPPQSLMNLAVVGSVWTASSFVECLRTILNRVYEIKSPPP 123
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL+S L+ S+ + F+ V IP+ + + I+ R ++
Sbjct: 124 YIRRRLLSILQFLVISILITFTMFLLVFIPIVFTKIPVLLETIEQYKNILNFIRYVLILV 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF+G ++ LP K + + PG + T I WV+ L + YIV ++ + MY L S
Sbjct: 184 LLFLGASSLYYILPNVKLNFIDVFPGALLTVILWVISGYLLSTYIVYYNQLNLMYGSLGS 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L+F Y++ + FI GAE N M Y KK
Sbjct: 244 IIVTLIFFYIINMIFIYGAEFNYLMKNYNIVKK 276
>gi|254463994|ref|ZP_05077405.1| YihY family protein [Rhodobacterales bacterium Y4I]
gi|206684902|gb|EDZ45384.1| YihY family protein [Rhodobacterales bacterium Y4I]
Length = 288
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 143/263 (54%), Gaps = 6/263 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG----FLGAHQFVPTVIDVVFGAW 70
A F ++GW M+SHI++S +L++FPF++F LAG L + + + VF W
Sbjct: 17 AARRFNRKNGWVMSSHIAMSMMLALFPFVLFTVALAGTVASLLSQEVEMDLMTEQVFSVW 76
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ +A+PI E+ VL L T+ L A YF+SNGV+A+R+++ +AY + R ++
Sbjct: 77 PDAVARPILTELKSVLQTSNTQLVTLGGLFALYFASNGVDAVRVAMVQAYHDTDTRPFWR 136
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R + G V++ ++ ++F V +PL + ++ K P ++ G LAL
Sbjct: 137 ARALCIGLVIMGGAGILAVAFFEVFLPLYVRHITKLLP-FASVPQGWEQGLSGLLALALP 195
Query: 191 IGLIFV-HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
IG + H+ LP + ILPG + T + W+ A F Y+ +F+ YS YAGLA M
Sbjct: 196 IGAVLAFHILLPGRIHRFRRILPGAVLTLLLWLACASGFAVYVGSFARYSATYAGLAGAM 255
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
++FLY+ ILGAE N ++
Sbjct: 256 AAMIFLYLNSAILILGAEFNGAL 278
>gi|90418166|ref|ZP_01226078.1| putative ribonuclease, BN-like family [Aurantimonas manganoxydans
SI85-9A1]
gi|90337838|gb|EAS51489.1| putative ribonuclease, BN-like family [Aurantimonas manganoxydans
SI85-9A1]
Length = 317
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 143/262 (54%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+ ++ +AI +D +A +I+ A+L++FPF++F ++L F+G + ++ +
Sbjct: 36 VWAVLREAILRLWNDDAMGLAGNIAFRAVLAIFPFLIFASSLTAFIGNREMADGLVTFLI 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P +A+P+ E++ ++ + G+ ++ L +F+ GV+ +R+ LNRAY + E RS
Sbjct: 96 AIVPPALAEPLVSEVMNIVTIRRGGVLSVGVLLTIWFAIGGVDGVRVGLNRAYDIRETRS 155
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L+ V+L + LV++ ++ V P A +++ + P + R AT
Sbjct: 156 TIVLYLLQVLTVVLTGLVLVVVGYLLVLAPRAGSFLHQLMPGFQPSSVTPSLVRYPATAA 215
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L L H+FLPA +S+ ++ PG++FT +W F+ YI F+ Y++ YAGLA
Sbjct: 216 ILTTALFVAHVFLPARRSRFSNMWPGILFTLCAWSALVAAFSVYIGQFANYASYYAGLAG 275
Query: 248 IMTCLVFLYMLGVFFILGAELN 269
I+ L FLY+ + I G ELN
Sbjct: 276 IIAALYFLYLAALVLIFGGELN 297
>gi|157825789|ref|YP_001493509.1| ribonuclease BN, putative [Rickettsia akari str. Hartford]
gi|157799747|gb|ABV75001.1| Ribonuclease BN, putative [Rickettsia akari str. Hartford]
Length = 275
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 136/265 (51%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F+ +Y A+ +E+DG + ++S L+S+FPF+VF L FLGA + I +
Sbjct: 4 IFNCLYVALFKTIEDDGVEHSGYMSFMILVSIFPFLVFLLALTSFLGASELGQNFIQIFL 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++ +
Sbjct: 64 ESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSPPT 123
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL+S L+ S + F+ V IP+ + + +I+ R ++
Sbjct: 124 YVRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFTRYSLILI 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF+G ++ LP K + + PG + T I WV+ L + YIV ++ + MY L S
Sbjct: 184 LLFLGASALYYILPNVKLNFIDVFPGALLTVILWVISGYLLSTYIVYYNQLNLMYGSLGS 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L+F Y++ + FI GAE N M
Sbjct: 244 IIVTLIFFYIINMIFIYGAEFNYLM 268
>gi|67459119|ref|YP_246743.1| ribonuclease BN, putative [Rickettsia felis URRWXCal2]
gi|67004652|gb|AAY61578.1| Ribonuclease BN, putative [Rickettsia felis URRWXCal2]
Length = 275
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 135/265 (50%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 4 IFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQIFL 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 64 ESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSPPP 123
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL+S L+ S + F+ V IP+ + + +I+ R ++
Sbjct: 124 YIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYSLILI 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF+G ++ LP K + + PG + T I WV+ L + YIV ++ + MY L S
Sbjct: 184 LLFLGASSLYYILPNVKLNFIDVFPGALLTVILWVISGYLLSTYIVYYNQLNLMYGSLGS 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L+F Y++ + FI GAE N M
Sbjct: 244 IIVTLIFFYIINMIFIYGAEFNYLM 268
>gi|304391893|ref|ZP_07373835.1| ribonuclease BN [Ahrensia sp. R2A130]
gi|303296122|gb|EFL90480.1| ribonuclease BN [Ahrensia sp. R2A130]
Length = 326
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 146/257 (56%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+++I V++ G A+AS+++LS LLS+FPF++ A+L F G + V+D+V G WP
Sbjct: 35 WESIVKLVDDGGLAIASNVALSLLLSLFPFLMLVASLVRFYGNPELAEGVVDLVLGHWPG 94
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
A PIT + +L PA F+ + A +SNGVE R LNRAY+V E RS+ R
Sbjct: 95 DAAAPITRTVETLLDQPAGEFFSFGTVIALILASNGVENARDGLNRAYKVKETRSFLWRR 154
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L +V++ +V ++ +F+ VA P+ + F L L++ G+ ++ L +
Sbjct: 155 LQGAFFVVVGAVGFILSAFILVATPIVWDFAVSKFDFLEEFGLLVTAGKYSIAIVLLGLI 214
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L H +LP + + SI+ G++ T + ++G+ LF Y+ + Y+ +YAGLA +M +
Sbjct: 215 LFAFHRYLPDTRYRRRSIIWGILLTIGAILLGSYLFGIYLQNIANYTALYAGLAGMMVAI 274
Query: 253 VFLYMLGVFFILGAELN 269
V+LY + V + GAE N
Sbjct: 275 VYLYCMSVLMLFGAEFN 291
>gi|157803755|ref|YP_001492304.1| hypothetical protein A1E_02895 [Rickettsia canadensis str. McKiel]
gi|157785018|gb|ABV73519.1| hypothetical protein A1E_02895 [Rickettsia canadensis str. McKiel]
Length = 275
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 140/273 (51%), Gaps = 16/273 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 4 IFHCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQIFL 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 64 ESLPEQATESIKKRIQELLSAPPQSLMNLAIVGSVWTASSFVECLRTILNRVYQIKSPPP 123
Query: 128 WYITRLISFGYVLLASVT-------LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ RL+S L+ S LV++ +F+ IP+ L + K+ II N
Sbjct: 124 YIRRRLLSIIQFLIISAVITFTMFLLVVIPIIFMKIPIILETIEKY--------KIILNV 175
Query: 181 RIYATML-ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
Y+ +L LF+G ++ LP K + + PG + T I W++ L + YIV ++ +
Sbjct: 176 IRYSLILILLFLGSSSLYYILPNVKLNFVDVFPGALLTVILWIISGYLLSTYIVYYNQLN 235
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
MY L SI+ L+F Y++ + FI GAE N M
Sbjct: 236 LMYGSLGSIIVTLIFFYIINMIFIYGAEFNYLM 268
>gi|157964558|ref|YP_001499382.1| putative ribonuclease BN [Rickettsia massiliae MTU5]
gi|157844334|gb|ABV84835.1| Putative ribonuclease BN [Rickettsia massiliae MTU5]
Length = 288
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 135/265 (50%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 17 IFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQIFL 76
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 77 ESLPEQATESIAKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSPPP 136
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL+S L+ S + F+ V IP+ + + +I+ R ++
Sbjct: 137 YIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYSLILI 196
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF+G ++ LP K + + PG + T I W++ L + YI+ ++ + MY L S
Sbjct: 197 LLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIIYYNQLNLMYGSLGS 256
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L+F Y++ + FI GAE N M
Sbjct: 257 IIVTLIFFYIINMIFIYGAEFNYLM 281
>gi|292572111|gb|ADE30026.1| Putative ribonuclease BN [Rickettsia prowazekii Rp22]
Length = 283
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 134/265 (50%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + +Y A+ +++DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 4 ILNCLYVALFRTIKDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQIFL 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 64 ESLPEQATESIEKRIRELLSAPPQSLMNLAIIGSIWTASSFVECLRTILNRVYQIKSPPP 123
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL+S L+ S + F+ V IP+ + + +I+ R ++
Sbjct: 124 YIRRRLLSIIQFLIISALITFTMFLLVVIPIIFTKIPIILETIEQYKIILNFIRYSLILI 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF+G ++ LP K + + PG + T + W++ L + YIV ++ + MY L S
Sbjct: 184 LLFLGASSLYYILPNVKLNFVDVFPGAVLTVVLWIISGYLLSTYIVYYNQLNLMYGSLGS 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L+F Y++ + FI GAE N M
Sbjct: 244 IIVTLIFFYIINMIFIYGAEFNYLM 268
>gi|51473680|ref|YP_067437.1| hypothetical protein RT0483 [Rickettsia typhi str. Wilmington]
gi|51459992|gb|AAU03955.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 281
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 134/265 (50%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + +Y A+ +++DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 6 ILNCLYVALFRTIKDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQIFL 65
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 66 ESLPEQATESIEKRIRELLSAPPQSLMNLAIIGSIWTASSFVECLRTILNRVYQIKSPPP 125
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL+S L+ S + F+ V IP+ + + +I+ R ++
Sbjct: 126 YIRRRLLSIIQFLIISALITFTMFLLVVIPIIFTKIPIILETIEQYKIILNFIRYSLILI 185
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF+G ++ LP K + + PG + T + W++ L + YIV ++ + MY L S
Sbjct: 186 LLFLGASSLYYILPNVKLNFVDVFPGAVLTVVLWIISGYLLSTYIVYYNQLNLMYGSLGS 245
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L+F Y++ + FI GAE N M
Sbjct: 246 IIVTLIFFYIINMIFIYGAEFNYLM 270
>gi|15604356|ref|NP_220872.1| hypothetical protein RP496 [Rickettsia prowazekii str. Madrid E]
gi|3861048|emb|CAA14948.1| unknown [Rickettsia prowazekii]
Length = 285
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 134/265 (50%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + +Y A+ +++DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 6 ILNCLYVALFRTIKDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQIFL 65
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 66 ESLPEQATESIEKRIRELLSAPPQSLMNLAIIGSIWTASSFVECLRTILNRVYQIKSPPP 125
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL+S L+ S + F+ V IP+ + + +I+ R ++
Sbjct: 126 YIRRRLLSIIQFLIISALITFTMFLLVVIPIIFTKIPIILETIEQYKIILNFIRYSLILI 185
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF+G ++ LP K + + PG + T + W++ L + YIV ++ + MY L S
Sbjct: 186 LLFLGASSLYYILPNVKLNFVDVFPGAVLTVVLWIISGYLLSTYIVYYNQLNLMYGSLGS 245
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L+F Y++ + FI GAE N M
Sbjct: 246 IIVTLIFFYIINMIFIYGAEFNYLM 270
>gi|229586760|ref|YP_002845261.1| Putative ribonuclease BN [Rickettsia africae ESF-5]
gi|228021810|gb|ACP53518.1| Putative ribonuclease BN [Rickettsia africae ESF-5]
Length = 275
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 136/265 (51%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 4 IFNCLYVALFRTIEDDGIEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQIFL 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 64 ESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSPPP 123
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL+S L+ S + F+ V IP+ + + +I+ R + ++
Sbjct: 124 YIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLILI 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L S
Sbjct: 184 LLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSLGS 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L+F Y++ + FI GAE N M
Sbjct: 244 IIVTLIFFYIINMIFIYGAEFNYLM 268
>gi|15892593|ref|NP_360307.1| hypothetical protein RC0670 [Rickettsia conorii str. Malish 7]
gi|238650246|ref|YP_002916097.1| ribonuclease BN, putative [Rickettsia peacockii str. Rustic]
gi|15619759|gb|AAL03208.1| unknown [Rickettsia conorii str. Malish 7]
gi|238624344|gb|ACR47050.1| ribonuclease BN, putative [Rickettsia peacockii str. Rustic]
Length = 275
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 136/265 (51%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 4 IFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQIFL 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 64 ESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSPPP 123
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL+S L+ S + F+ V IP+ + + +I+ R + ++
Sbjct: 124 YIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLILI 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L S
Sbjct: 184 LLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSLGS 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L+F Y++ + FI GAE N M
Sbjct: 244 IIVTLIFFYIINMIFIYGAEFNYLM 268
>gi|34580425|ref|ZP_00141905.1| hypothetical protein [Rickettsia sibirica 246]
gi|28261810|gb|EAA25314.1| unknown [Rickettsia sibirica 246]
Length = 275
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 136/265 (51%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 4 IFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQIFL 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 64 ESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSPPP 123
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL+S L+ S + F+ V IP+ + + +I+ R + ++
Sbjct: 124 YIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLILI 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L S
Sbjct: 184 LLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSLGS 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L+F Y++ + FI GAE N M
Sbjct: 244 IIVTLIFFYIINMIFIYGAEFNYLM 268
>gi|157828543|ref|YP_001494785.1| hypothetical protein A1G_03800 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933259|ref|YP_001650048.1| ribonuclease BN [Rickettsia rickettsii str. Iowa]
gi|157801024|gb|ABV76277.1| hypothetical protein A1G_03800 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908346|gb|ABY72642.1| ribonuclease BN [Rickettsia rickettsii str. Iowa]
Length = 275
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 134/263 (50%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I + +
Sbjct: 6 NCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQIFLES 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++ +
Sbjct: 66 LPEQAMESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSPPPYI 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL+S L+ S + F+ V IP+ + + +I+ R + ++ L
Sbjct: 126 RRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLILILL 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L SI+
Sbjct: 186 FLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSLGSII 245
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L+F Y++ + FI GAE N M
Sbjct: 246 VTLIFFYIINMIFIYGAEFNYLM 268
>gi|300021750|ref|YP_003754361.1| ribonuclease BN [Hyphomicrobium denitrificans ATCC 51888]
gi|299523571|gb|ADJ22040.1| ribonuclease BN [Hyphomicrobium denitrificans ATCC 51888]
Length = 294
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 140/270 (51%), Gaps = 19/270 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+++AI E G+AMA ++ S ++S+FPF +F L+G G + I+ +F P
Sbjct: 7 LFEAIYRLYEHSGFAMAGAVAFSFVVSIFPFCIFLGALSGVFGGRELAQDAINQLFAILP 66
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E +AK I EI V+ L T S A +F+++ +E LR +LN AYRV E R + +
Sbjct: 67 EPVAKGIAPEIEAVMGSRRIDLLTASGFLALFFATSAIETLRAALNGAYRVHEKRPYPLC 126
Query: 132 RLISFGYVLLASVTLVIMSFVF----------VAIPLALAYVRKFFP--ALGNLLLIIWN 179
LIS +V +++++ +++++ +A +V++ F ALG +
Sbjct: 127 LLISMLFVFVSAISTLVLTWAVVVGPSVVGPAIASQFESEWVKRLFDSTALGPGVRYGLA 186
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G + A L +HL+L A + ++ + PGV+ + + W+ A L++ Y+ + YS
Sbjct: 187 GAVIAAQLCA------LHLWLAAGRRRLADVWPGVLLSIVLWLALAGLWSRYL-AITNYS 239
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELN 269
YAGL+ +M L+F + +LGAE N
Sbjct: 240 LFYAGLSQLMIALIFFQFTAITILLGAEFN 269
>gi|68171918|ref|ZP_00545237.1| Ribonuclease BN [Ehrlichia chaffeensis str. Sapulpa]
gi|88658113|ref|YP_507343.1| YihY family protein [Ehrlichia chaffeensis str. Arkansas]
gi|67998663|gb|EAM85396.1| Ribonuclease BN [Ehrlichia chaffeensis str. Sapulpa]
gi|88599570|gb|ABD45039.1| YihY family protein [Ehrlichia chaffeensis str. Arkansas]
Length = 274
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 16/275 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAH 56
++E + IY A+ + DG A ++S LLS+FPF+VF +N+A L +
Sbjct: 2 LKEKIKCLLKCIYYAMVDMIRHDGIEHAGYLSFIILLSIFPFLVFFMALVSNVAQLLNHY 61
Query: 57 QFV--PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+I ++ P + + I ++++ P L T++ + + +S+ VE +R
Sbjct: 62 DISINDKLIILINDNIPHEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRT 121
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
LN+A RV S+ RL+S L+ ++T++I + +P+ + K LG L
Sbjct: 122 ILNKACRVSSPPSYIFRRLLSIFQFLVITLTIIIAMVCIILLPVIYEMLNK---DLGYL- 177
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + L LFI + ++ +P K +M ++PG I + W + +FT YI T
Sbjct: 178 ------KYTVSELVLFISITLLYFIVPNIKQSLMDVIPGAILVTLLWTCSSFVFTWYIKT 231
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
F + +Y LASI+ L+F Y+L +FFI GAELN
Sbjct: 232 FHQLNIIYGSLASIIASLLFFYILSIFFIYGAELN 266
>gi|315282669|ref|ZP_07871025.1| transport protein [Listeria marthii FSL S4-120]
gi|313613685|gb|EFR87473.1| transport protein [Listeria marthii FSL S4-120]
Length = 289
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 13/265 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
D A+ ++ L S+FP ++ A L +L H +V +++ P+ I + D
Sbjct: 27 RNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYL--HIDKDSVFNMIKEFAPDQIMDFLED 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNTLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I + L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLLVFGQQIGMFLINHLNFSEDF----LSFWNNLRWTVTLVVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
+ G+ ++G ELNA++ I RKK
Sbjct: 261 LTGIILMIGGELNATLAI---RKKK 282
>gi|313632903|gb|EFR99846.1| transport protein [Listeria seeligeri FSL N1-067]
gi|313637503|gb|EFS02939.1| transport protein [Listeria seeligeri FSL S4-171]
Length = 289
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ D A+ ++ L S+FP ++ A L ++ H +V +++ PE I + +
Sbjct: 27 QNDVSGNAAQLAYYMLFSIFPMMLIAATLLAYM--HIDKDSVFNMLKEFAPEQILDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ +LN+AY V R++ + RL+S F
Sbjct: 85 NLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKALNKAYGVTNKRNYVVQRLLSMLFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I L L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLIVFGQQIGLFLINHLNFSEDF----LSFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG IF+ I W V +V F +Y+ F+ YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGAIFSTIGWTVASVGFAYYVNNFANYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKK 280
+ G+ ++G ELNA++ I +K+
Sbjct: 261 LTGIILMVGGELNATLAIRKKKKQ 284
>gi|289435039|ref|YP_003464911.1| hypothetical protein lse_1674 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171283|emb|CBH27825.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 289
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ D A+ ++ L S+FP ++ A L ++ H +V +++ PE I + +
Sbjct: 27 QNDVSGNAAQLAYYMLFSIFPMMLIAATLLAYM--HIDKDSVFNMLKEFAPEQILDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ +LN+AY V R++ + RL+S F
Sbjct: 85 NLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKALNKAYGVTNKRNYVVQRLLSMFFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I L L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLIVFGQQIGLFLINHLNFSEDF----LSFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG IF+ I W V +V F +Y+ F+ YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGAIFSTIGWTVASVGFAYYVNNFANYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKK 280
+ G+ ++G ELNA++ I +K+
Sbjct: 261 LTGIILMVGGELNATLAIRKKKKQ 284
>gi|313623420|gb|EFR93635.1| transport protein [Listeria innocua FSL J1-023]
Length = 289
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 13/265 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
D A+ ++ L S+FP ++ A L +L H +V +++ P+ I + +
Sbjct: 27 RNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYL--HIDKDSVFNMIKEFAPDQIMDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I + L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLLVFGQQIGMFLINHLNFSEDF----LSFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
+ G+ ++G ELNA++ I RKK
Sbjct: 261 LTGIILMIGGELNATLAI---RKKK 282
>gi|315303543|ref|ZP_07874107.1| transporter [Listeria ivanovii FSL F6-596]
gi|313628085|gb|EFR96654.1| transporter [Listeria ivanovii FSL F6-596]
Length = 289
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 137/265 (51%), Gaps = 13/265 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ D A+ ++ L S+FP ++ A L ++ H +V +++ PE I + +
Sbjct: 27 QNDVSGNAAQLAYYMLFSIFPMMLIAATLLAYM--HIDKDSVFNMLKEFAPEQILDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVMQRLLSMLFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I L L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLIVFGQQIGLFLINHLNFSEDF----LDFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG IF+ + W + +V F +Y+ F+ YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGAIFSTVGWTIASVGFAYYVNNFANYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
+ G+ ++G ELNA++ I RKK
Sbjct: 261 LTGIILMVGGELNATLAI---RKKK 282
>gi|16803746|ref|NP_465231.1| hypothetical protein lmo1706 [Listeria monocytogenes EGD-e]
gi|224499572|ref|ZP_03667921.1| hypothetical protein LmonF1_07697 [Listeria monocytogenes Finland
1988]
gi|224503369|ref|ZP_03671676.1| hypothetical protein LmonFR_12785 [Listeria monocytogenes FSL
R2-561]
gi|255028332|ref|ZP_05300283.1| hypothetical protein LmonL_02181 [Listeria monocytogenes LO28]
gi|16411160|emb|CAC99784.1| lmo1706 [Listeria monocytogenes EGD-e]
Length = 289
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 13/265 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
D A+ ++ L S+FP ++ A L +L H +V +++ P+ I + +
Sbjct: 27 RNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYL--HIDKDSVFNMIKEFAPDQIMDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I + L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLLVFGQQIGMFLINHLNFSEDF----LSFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
+ G+ ++G ELNA++ I RKK
Sbjct: 261 LTGIILMIGGELNATLAI---RKKK 282
>gi|58617238|ref|YP_196437.1| hypothetical protein ERGA_CDS_05110 [Ehrlichia ruminantium str.
Gardel]
gi|58416850|emb|CAI27963.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 277
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 20/270 (7%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQFVPTVI 63
+F Y A+ +E DG A ++S LLSVFPF+VF +NLA L H + +V
Sbjct: 9 IFKCSYYAVVDMIEHDGIEHAGYLSFVILLSVFPFLVFFMALMSNLAQLL--HYYDISVS 66
Query: 64 D----VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
D ++ P + + I ++++ P L T++ + + +S+ VE +R LN+A
Sbjct: 67 DKLIILITDNIPSEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRTILNKA 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
RV S+ RL+S + ++ + I + +P+ + K LG
Sbjct: 127 CRVSSPPSYIFRRLLSIFQFISITLAMTIAMICIIVLPVIYEMLNK---NLGYF------ 177
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + L LF+ + ++ +P K + +++PG + W +++FT Y+ TF +
Sbjct: 178 -KYAVSELVLFVSITLLYFIIPNVKQNLANVIPGAVLVTFLWTCSSLIFTWYLKTFHQLN 236
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+Y LASI+ L+F Y+L +FFI GAE N
Sbjct: 237 IIYGSLASIIASLLFFYILSIFFIYGAEFN 266
>gi|313608345|gb|EFR84318.1| transport protein [Listeria monocytogenes FSL F2-208]
Length = 289
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 136/265 (51%), Gaps = 13/265 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ D A+ ++ L S+FP ++ A L +L H +V +++ P+ I + +
Sbjct: 27 KNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYL--HIDKDSVFNMIKEFAPDQIMDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I + L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLLVFGQQIGMFLINHLNFSEDF----LSFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
+ G+ ++G ELNA++ I RKK
Sbjct: 261 LTGIILMIGGELNATLAI---RKKK 282
>gi|290893364|ref|ZP_06556349.1| YihY family protein [Listeria monocytogenes FSL J2-071]
gi|290557015|gb|EFD90544.1| YihY family protein [Listeria monocytogenes FSL J2-071]
Length = 308
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 135/265 (50%), Gaps = 13/265 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
D A+ ++ L S+FP ++ A L +L H +V +++ P+ I + +
Sbjct: 27 RNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYL--HIDKDSVFNMIKEFAPDQIMDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I + L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLLVFGQQIGMFLINHLNFSEDF----LSFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
+ G+ ++G ELNA++ I RKK
Sbjct: 261 LTGIILMIGGELNATLAI---RKKK 282
>gi|57239224|ref|YP_180360.1| hypothetical protein Erum4970 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161303|emb|CAH58226.1| putative tRNA processing ribonuclease BN [Ehrlichia ruminantium
str. Welgevonden]
Length = 277
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 20/270 (7%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQFVPTVI 63
+F Y A+ +E DG A ++S LLSVFPF+VF +NLA L H + +V
Sbjct: 9 IFKCSYYAVVDMIEHDGIEHAGYLSFVILLSVFPFLVFFMALMSNLAQLL--HYYDISVS 66
Query: 64 D----VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
D ++ P + + I ++++ P L T++ + + +S+ VE +R LN+A
Sbjct: 67 DKLIILITDNIPSEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRTILNKA 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
RV S+ RL+S + ++ + I + +P+ + K LG
Sbjct: 127 CRVSSPPSYIFRRLLSIFQFISITLAMTIAMICIIVLPVIYEMLNK---NLGYF------ 177
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + L LF+ + ++ +P K + +++PG + W +++FT Y+ TF +
Sbjct: 178 -KYAVSELVLFVSITLLYFIIPNVKQNLANVVPGAVLVTFLWTCSSLIFTWYLKTFHQLN 236
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+Y LASI+ L+F Y+L +FFI GAE N
Sbjct: 237 IIYGSLASIIASLLFFYILSIFFIYGAEFN 266
>gi|46907937|ref|YP_014326.1| ribonuclease BN [Listeria monocytogenes serotype 4b str. F2365]
gi|47094251|ref|ZP_00231961.1| ribonuclease BN, putative [Listeria monocytogenes str. 4b H7858]
gi|217964144|ref|YP_002349822.1| transporter [Listeria monocytogenes HCC23]
gi|226224309|ref|YP_002758416.1| transport protein [Listeria monocytogenes Clip81459]
gi|254826046|ref|ZP_05231047.1| YihY family protein [Listeria monocytogenes FSL J1-194]
gi|254853622|ref|ZP_05242970.1| YihY family protein [Listeria monocytogenes FSL R2-503]
gi|254932848|ref|ZP_05266207.1| YihY family protein [Listeria monocytogenes HPB2262]
gi|255520201|ref|ZP_05387438.1| transport protein [Listeria monocytogenes FSL J1-175]
gi|300764677|ref|ZP_07074668.1| ribonuclease BN [Listeria monocytogenes FSL N1-017]
gi|46881206|gb|AAT04503.1| YihY family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47017379|gb|EAL08202.1| ribonuclease BN, putative [Listeria monocytogenes str. 4b H7858]
gi|217333414|gb|ACK39208.1| transporter [Listeria monocytogenes HCC23]
gi|225876771|emb|CAS05480.1| Putative transport protein [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606997|gb|EEW19605.1| YihY family protein [Listeria monocytogenes FSL R2-503]
gi|293584402|gb|EFF96434.1| YihY family protein [Listeria monocytogenes HPB2262]
gi|293595286|gb|EFG03047.1| YihY family protein [Listeria monocytogenes FSL J1-194]
gi|300514563|gb|EFK41619.1| ribonuclease BN [Listeria monocytogenes FSL N1-017]
gi|307571289|emb|CAR84468.1| ribonuclease BN, putative [Listeria monocytogenes L99]
gi|328466464|gb|EGF37607.1| transport protein [Listeria monocytogenes 1816]
gi|332312148|gb|EGJ25243.1| Transporter [Listeria monocytogenes str. Scott A]
Length = 289
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 135/265 (50%), Gaps = 13/265 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
D A+ ++ L S+FP ++ A L +L H +V +++ P+ I + +
Sbjct: 27 RNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYL--HIDKDSVFNMIKEFAPDQIMDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I + L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLLVFGQQIGMFLINHLNFSEDF----LSFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
+ G+ ++G ELNA++ I RKK
Sbjct: 261 LTGIILMIGGELNATLAI---RKKK 282
>gi|47097606|ref|ZP_00235132.1| ribonuclease BN, putative [Listeria monocytogenes str. 1/2a F6854]
gi|254829230|ref|ZP_05233917.1| YihY family protein [Listeria monocytogenes FSL N3-165]
gi|254832411|ref|ZP_05237066.1| hypothetical protein Lmon1_13734 [Listeria monocytogenes 10403S]
gi|254900789|ref|ZP_05260713.1| hypothetical protein LmonJ_13274 [Listeria monocytogenes J0161]
gi|254913725|ref|ZP_05263737.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254938112|ref|ZP_05269809.1| YihY family protein [Listeria monocytogenes F6900]
gi|284802152|ref|YP_003414017.1| hypothetical protein LM5578_1907 [Listeria monocytogenes 08-5578]
gi|284995294|ref|YP_003417062.1| hypothetical protein LM5923_1859 [Listeria monocytogenes 08-5923]
gi|47014019|gb|EAL05026.1| ribonuclease BN, putative [Listeria monocytogenes str. 1/2a F6854]
gi|258601641|gb|EEW14966.1| YihY family protein [Listeria monocytogenes FSL N3-165]
gi|258610724|gb|EEW23332.1| YihY family protein [Listeria monocytogenes F6900]
gi|284057714|gb|ADB68655.1| hypothetical protein LM5578_1907 [Listeria monocytogenes 08-5578]
gi|284060761|gb|ADB71700.1| hypothetical protein LM5923_1859 [Listeria monocytogenes 08-5923]
gi|293591740|gb|EFG00075.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 289
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 135/265 (50%), Gaps = 13/265 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
D A+ ++ L S+FP ++ A L +L H +V +++ P+ I + +
Sbjct: 27 RNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYL--HIDKDSVFNMIKEFAPDQIMDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I + L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLLVFGQQIGMFLINHLNFSEDF----LSFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
+ G+ ++G ELNA++ I RKK
Sbjct: 261 LTGIILMIGGELNATLAI---RKKK 282
>gi|16800885|ref|NP_471153.1| hypothetical protein lin1818 [Listeria innocua Clip11262]
gi|16414320|emb|CAC97049.1| lin1818 [Listeria innocua Clip11262]
gi|313618455|gb|EFR90462.1| transport protein [Listeria innocua FSL S4-378]
Length = 289
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 135/265 (50%), Gaps = 13/265 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
D A+ ++ L S+FP ++ A L +L H +V +++ P+ I + +
Sbjct: 27 RNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYL--HIDKDSVFNMIKEFAPDQIMDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNTLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I + L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLLVFGQQIGMFLINHLNFSEDF----LSFWNNLRWTVTLVVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG +F+ I W + +V F +Y+ F YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGALFSTIGWTIASVGFAYYVNNFGNYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
+ G+ ++G ELNA++ I RKK
Sbjct: 261 LTGIILMIGGELNATLAI---RKKK 282
>gi|116873142|ref|YP_849923.1| hypothetical protein lwe1726 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742020|emb|CAK21144.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 289
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 135/264 (51%), Gaps = 10/264 (3%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
D A+ ++ L S+FP ++ A L +L H +V +++ P+ I + +
Sbjct: 27 RNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYL--HIDKDSVFNMIKEFAPDQIMDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNTLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTM 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I + L F L WN R T++ +F+ F+
Sbjct: 145 SMLATVGATLLLLVFGQQIGMFLINHLHFSEDF----LSFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y + I+ +++ Y
Sbjct: 201 YWVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGVIIILMLWFY 260
Query: 257 MLGVFFILGAELNASMIIYYWRKK 280
+ G+ ++G ELNA++ I +K+
Sbjct: 261 LTGIILMIGGELNATLAIRKKKKE 284
>gi|58579184|ref|YP_197396.1| hypothetical protein ERWE_CDS_05200 [Ehrlichia ruminantium str.
Welgevonden]
gi|58417810|emb|CAI27014.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 277
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 132/270 (48%), Gaps = 20/270 (7%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQFVPTVI 63
+F Y A+ +E DG A ++S LLSVFPF+VF +NLA L H + +V
Sbjct: 9 IFKCSYYAVVDMIEHDGIEHAGYLSFVILLSVFPFLVFFMALMSNLAQLL--HYYDISVS 66
Query: 64 D----VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
D ++ P + + I ++++ P L T++ + + +S+ VE +R LN+A
Sbjct: 67 DKLIILITDNIPSEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRTILNKA 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
RV S+ RL+S + ++ + I + P+ + K LG
Sbjct: 127 CRVSSPPSYIFRRLLSIFQFISITLAMTIAMICIIVFPVIYEMLNK---NLGYF------ 177
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + L LF+ + ++ +P K + +++PG + W +++FT Y+ TF +
Sbjct: 178 -KYAVSELVLFVSITLLYFIIPNVKQNLANVVPGAVLVTFLWTCSSLIFTWYLKTFHQLN 236
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+Y LASI+ L+F Y+L +FFI GAE N
Sbjct: 237 IIYGSLASIIASLLFFYILSIFFIYGAEFN 266
>gi|73667122|ref|YP_303138.1| ribonuclease BN [Ehrlichia canis str. Jake]
gi|72394263|gb|AAZ68540.1| Ribonuclease BN [Ehrlichia canis str. Jake]
Length = 279
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 18/265 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQFV--PTVIDV 65
+Y A+ V+ DG A ++S LLS+FPF+VF +N+A L + +I +
Sbjct: 13 VYYAMVDMVKHDGIEHAGYLSFIILLSIFPFLVFLMALVSNVAQLLNYYDISISEKLILL 72
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P I I I ++++ P L T++ + + SS+ VE +R LN+AYRV
Sbjct: 73 INDNVPSEIISGIMPRIQEIISGPPHSLLTLAIIGTVWTSSSAVEGIRTILNKAYRVSSP 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA- 184
S+ RL+S L+ +VT+ I + +P+ + + YA
Sbjct: 133 PSYIFRRLLSIFQFLMITVTITIAMVSIILLPVIYEMLDRNLAYFK-----------YAI 181
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L LF + ++ +P K +++++PG + W + +FT YI TF + +Y
Sbjct: 182 SELMLFTSITLLYFIVPNIKQNLINVVPGAMLVTFLWTCSSFVFTWYIKTFQQLNIIYGS 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
LA I+ L+F Y+L +FFI GAE N
Sbjct: 242 LAGIIASLLFFYILSIFFIYGAEFN 266
>gi|218513787|ref|ZP_03510627.1| putative ribonuclease protein [Rhizobium etli 8C-3]
Length = 161
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 94/125 (75%)
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
+S + VA+PLAL Y R +FP + L I+++ RIY T++ L +GL+ +HL+LPA K ++
Sbjct: 3 ISILLVAVPLALDYARNWFPLFADTLDIVFSWRIYGTLVVLTVGLLVMHLWLPAGKRRVF 62
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++PGV+ T + W+ GA++F +Y+ TF+ Y+ YAGLAS+M L+FLYM+GV FI+GAE+
Sbjct: 63 DVIPGVLLTLLLWLAGALIFAYYLATFANYTATYAGLASVMIVLIFLYMVGVIFIIGAEI 122
Query: 269 NASMI 273
NA++I
Sbjct: 123 NAALI 127
>gi|88606794|ref|YP_505080.1| YihY family protein [Anaplasma phagocytophilum HZ]
gi|88597857|gb|ABD43327.1| YihY family protein [Anaplasma phagocytophilum HZ]
Length = 277
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 130/266 (48%), Gaps = 15/266 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQFVPT-VI 63
F I A+ F + DG A ++S LLS+FPF VF +++ L QF+ T +
Sbjct: 10 FKCICKAVIDFRDHDGMEYAGYLSFIVLLSMFPFFVFFNALTSSIVSVLDKDQFLYTRLF 69
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
DV+ G P + I ++L+ P + L T++ + +S+ +E +R LN+A RV
Sbjct: 70 DVLSGELPHDTMDALLPRIEEILSGPPQSLLTVAIGGVIWTASSVIEGIRHVLNKALRVS 129
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ + R+ S L+ +++ V +P+ V + + L R
Sbjct: 130 APPPYILGRMFSILQFLIIVAVMMLSVLFAVLVPIIFEVVGRHWEFL----------RFV 179
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + LFI + +++ +P + I+ +LPG +W + ++ F+ Y+ TF T+Y
Sbjct: 180 VSKVVLFIAVSWIYFMVPNVRQNILVVLPGAAVVTATWTLTSMAFSWYLSTFQVLKTIYG 239
Query: 244 GLASIMTCLVFLYMLGVFFILGAELN 269
L I+ ++F Y+L +FFI GAELN
Sbjct: 240 NLTGIIAAMLFFYILSIFFIYGAELN 265
>gi|251779224|ref|ZP_04822144.1| YihY family protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083539|gb|EES49429.1| YihY family protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 282
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 133/252 (52%), Gaps = 6/252 (2%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+D +A+AS ++ LLS FPFI+F L GF +++ + PE + +
Sbjct: 24 NDDIFALASQLAYYLLLSFFPFIIFLITLIGFSNMDSI--QILNGIRAIVPEAVFDLTSS 81
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I++V GL IS L A + SS+G A+ +N+AY E RS+ +IS V+
Sbjct: 82 IIIEVFDKQYTGLLGISILLALWTSSSGFRAVIKGVNKAYSFKEHRSFIKRLIISMISVI 141
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF--VHL 198
++T+++ + V + Y+ K P NL++I+WN YA ++ + I IF ++
Sbjct: 142 ALALTIILALSMLVFGNVIGNYIVKVIP-FTNLVIILWNICRYAFVVIIMI-FIFASIYR 199
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
F P+ + + ++PG IF+ + W+V + F+ YI F +S Y L ++ + +L+++
Sbjct: 200 FTPSKRLRWREVIPGSIFSTLGWIVTSYGFSFYIDNFRNFSRFYGSLGAVFILMTWLFLI 259
Query: 259 GVFFILGAELNA 270
+ FILG E+N
Sbjct: 260 SILFILGVEINC 271
>gi|188588648|ref|YP_001922492.1| YihY family protein [Clostridium botulinum E3 str. Alaska E43]
gi|188498929|gb|ACD52065.1| YihY family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 282
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 132/252 (52%), Gaps = 6/252 (2%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+D +A+AS ++ LLS FPFI+F L GF +++ + PE +
Sbjct: 24 NDDIFALASQLAYYLLLSFFPFIIFLITLIGFSNMDSI--QILNGIRAIVPEAVFDLTAS 81
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I++V GL IS L A + SS+G A+ +N+AY E RS+ +IS V+
Sbjct: 82 IIVEVFDKQYTGLLGISILLALWTSSSGFRAVIKGVNKAYNFKEHRSFIKRLIISMISVI 141
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF--VHL 198
++T+++ + V + Y+ K P NL++I+WN YA ++ + I IF ++
Sbjct: 142 ALALTIILALSMLVFGNVIGNYIVKVIP-FTNLVIILWNICRYAFVVIIMI-FIFASIYR 199
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
F P+ + + ++PG IF+ + W+V + F+ YI F +S Y L ++ + +L+++
Sbjct: 200 FTPSKRLRWREVIPGSIFSTLGWIVTSYGFSFYIDNFRNFSRFYGSLGAVFILMTWLFLI 259
Query: 259 GVFFILGAELNA 270
+ FILG E+N
Sbjct: 260 SILFILGVEINC 271
>gi|187935176|ref|YP_001887555.1| YihY family protein [Clostridium botulinum B str. Eklund 17B]
gi|187723329|gb|ACD24550.1| YihY family protein [Clostridium botulinum B str. Eklund 17B]
Length = 282
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 131/252 (51%), Gaps = 6/252 (2%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+D +A+AS ++ LLS FPFI+F L GF +++ + PE + +
Sbjct: 24 NDDIFALASQLAYYLLLSFFPFIIFLITLVGFSNMDSI--QILNGIKAVVPEAVFDLTSS 81
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I++V GL IS L A + SS+G A+ +N+AY E RS+ +IS V+
Sbjct: 82 TIIEVFDKQYTGLLEISILLALWTSSSGFRAVIKGVNKAYDFKENRSFIKRLIISMISVI 141
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN--GRIYATMLALFIGLIFVHL 198
++T+++ + V + Y+ K P L++I+WN ++ ++ +FI ++
Sbjct: 142 ALALTIILALSMLVFGNVIENYIIKIIP-FTKLVVILWNICRYVFVVIIMVFI-FASIYR 199
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
F P+ + K ++PG IF+ + W++ + F+ YI F +S Y L ++ + +L+++
Sbjct: 200 FTPSKRLKWRDVIPGSIFSTVGWIITSYGFSFYIDNFRNFSRFYGSLGAVFILMTWLFLV 259
Query: 259 GVFFILGAELNA 270
+ FILG E+N
Sbjct: 260 SILFILGVEINC 271
>gi|254992437|ref|ZP_05274627.1| transport protein [Listeria monocytogenes FSL J2-064]
Length = 239
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 113/215 (52%), Gaps = 11/215 (5%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ +
Sbjct: 25 PDQIMDFLEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVV 84
Query: 131 TRLIS--FGYVLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
RL+S F +LA+V ++ VF I + L F L WN R T+
Sbjct: 85 QRLLSMFFTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDF----LSFWNNLRWTVTL 140
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ +F+ F++ P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y +
Sbjct: 141 IVIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIG 200
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
I+ +++ Y+ G+ ++G ELNA++ I RKK
Sbjct: 201 VIIILMLWFYLTGIILMIGGELNATLAI---RKKK 232
>gi|311067277|ref|YP_003972200.1| YfkH protein [Bacillus atrophaeus 1942]
gi|310867794|gb|ADP31269.1| YfkH [Bacillus atrophaeus 1942]
Length = 279
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 15/276 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D I + F +G + ++ ++ LLS+FPF++F LA +L P D V G
Sbjct: 2 DFIKELFGRFTLHEGQSKSAELAYFFLLSLFPFMIFILTLAAYL------PLTSDDVLGV 55
Query: 70 ----WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ I Q L GL + +AA + +SNG+ A+ + N AY V E
Sbjct: 56 VDQYAPDGAMSLIQSITEQTLNNRNGGLLSFGIIAALWSASNGMNAIVRAFNHAYEVEEN 115
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYA 184
RS+ I RL S ++ + V ++++ + + + F ++ L +W R
Sbjct: 116 RSFIIVRLTSI-FLTIGMVFTILVALLLPVFGKQIGLLTAEFVGASDMFLAVWAAVRWGI 174
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L L I ++LF P K + + PG +F I W+ + LF+ Y+ T++ YS Y
Sbjct: 175 SPLILLIVFSALYLFAPNKKLSLRFVFPGALFATIGWIAVSTLFSFYVGTYANYSATYGS 234
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ I+ +++ Y+ G+ ILG E+NA + + RKK
Sbjct: 235 IGGIIVLMIWFYLSGILIILGGEINA---LLHKRKK 267
>gi|152974229|ref|YP_001373746.1| putative ribonuclease BN [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152022981|gb|ABS20751.1| putative ribonuclease BN [Bacillus cytotoxicus NVH 391-98]
Length = 289
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 6/269 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFVITLLGFIDLQ--TENVLNLLEPYVPEE 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + QV+ GL + L+ +F+SNGV A+ + NRAY V E RS+ +TR
Sbjct: 77 AMNLIEVNVDQVINNQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSFIVTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIG 192
+S + L +V V V + A V K L +W+ R+ A+ L LF
Sbjct: 137 LSIVFTLAMIFMIVFALIVPVFGQVIGAAVFKVL-GLSESFSFVWSIIRLVASFLVLFAL 195
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL I+ +
Sbjct: 196 FSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGGIIILM 255
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ Y+ +LG E+N ++Y++R
Sbjct: 256 LWFYLTAWVILLGGEING--LLYFYRTND 282
>gi|196034774|ref|ZP_03102182.1| YihY family protein [Bacillus cereus W]
gi|218901611|ref|YP_002449445.1| YihY family protein [Bacillus cereus AH820]
gi|228925661|ref|ZP_04088749.1| YihY [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228931903|ref|ZP_04094798.1| YihY [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228944214|ref|ZP_04106592.1| YihY [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|229120067|ref|ZP_04249321.1| YihY [Bacillus cereus 95/8201]
gi|195992817|gb|EDX56777.1| YihY family protein [Bacillus cereus W]
gi|218539779|gb|ACK92177.1| YihY family protein [Bacillus cereus AH820]
gi|228663386|gb|EEL18972.1| YihY [Bacillus cereus 95/8201]
gi|228815464|gb|EEM61707.1| YihY [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228827757|gb|EEM73496.1| YihY [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228833997|gb|EEM79546.1| YihY [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 286
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 132/266 (49%), Gaps = 9/266 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V+D++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLDLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIG 192
+S + L ++ M + +P+ + L + W+ R+ ++ LF
Sbjct: 137 LSIVFTL----AIIFMIVFALLVPVFGQVIGAEIIGLSDTYSYAWSVTRLVSSFFVLFAL 192
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
F++ F P K K ++ G +F I W+V + F +Y+ F+ Y+ Y GL I+ +
Sbjct: 193 FSFLYTFAPDRKLKRREVVSGALFATIGWIVVSYSFAYYVDKFANYANTYGGLGGIIVLM 252
Query: 253 VFLYMLGVFFILGAELNASMIIYYWR 278
++ Y+ G +LG E+N +++++R
Sbjct: 253 LWFYLTGWVILLGGEING--LLHHYR 276
>gi|150019687|ref|YP_001311941.1| ribonuclease BN [Clostridium beijerinckii NCIMB 8052]
gi|149906152|gb|ABR36985.1| putative ribonuclease BN [Clostridium beijerinckii NCIMB 8052]
Length = 284
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 139/263 (52%), Gaps = 8/263 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVF 67
++I I +D +A+AS ++ +LS FPF++F LAGF + + Q + ++V+
Sbjct: 11 NLIIHLIVKIKRDDVFALASQLAYYLILSFFPFMLFLMTLAGFSSISSKQILGQ-LNVML 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + ++++ GL IS L + +S+ +A+ S+N+AY E RS
Sbjct: 70 ---PRSVLELTQSTVVEIFDNQYTGLLGISILLTLWTASSAFKAIIKSINKAYNFKEERS 126
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +IS +L +VT+++ V + Y++ P ++LIIWN Y +L
Sbjct: 127 FIKLSIISMLGILALAVTIILALTALVFGNVIGDYIKSINP-FYEIILIIWNIFRYTFIL 185
Query: 188 ALFIGL-IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A+ I + I V+ F PA K ++ G IF+ + WV+ + +F+ YI F+ YS Y L
Sbjct: 186 AIMISIFICVYKFAPAKKLVWKEVIAGSIFSTVGWVLVSFVFSFYIDNFNNYSRFYGSLG 245
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
++ + +L+++ + FILG E+N
Sbjct: 246 AVFILMTWLFLISIIFILGVEIN 268
>gi|299820568|ref|ZP_07052458.1| YihY family protein [Listeria grayi DSM 20601]
gi|299818063|gb|EFI85297.1| YihY family protein [Listeria grayi DSM 20601]
Length = 285
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 134/271 (49%), Gaps = 24/271 (8%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ D A+ ++ L S+FP ++ L GFL + ++ +V P+ I I
Sbjct: 23 KNDVTGNAAQLAYYMLFSIFPLLLVAVALLGFLNLDK--DSIFQMVEDFAPKQIIDFIQT 80
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ QVL+ + GL ++ LA + +SNG+ A+ +LN+AY +++ R++ I +L+S
Sbjct: 81 NLDQVLSNRSGGLLSVGILATLWSASNGMAAVMKALNKAYGIIDRRNFIIQKLLS----- 135
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL----------IIWNG-RIYATMLAL 189
V + V VAI L L F +G+ LL +WNG R ++L +
Sbjct: 136 ---VLFTVAMLVTVAITLVLLV---FGQQIGDFLLHSLHMPSQVIDVWNGLRELLSVLVI 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ F++ F P K I ++LPG +F I W + ++ F Y+ F Y+ Y + ++
Sbjct: 190 LVVFTFLYWFAPNRKGTIKTVLPGALFASIGWSLASIGFAFYVNNFGNYTATYGSIGIVI 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ ++ G+ I+G ELN ++ +K+
Sbjct: 250 VLMLWFFLTGIILIVGGELNGTLAFIKQKKE 280
>gi|229015792|ref|ZP_04172770.1| YihY [Bacillus cereus AH1273]
gi|229022000|ref|ZP_04178557.1| YihY [Bacillus cereus AH1272]
gi|228739306|gb|EEL89745.1| YihY [Bacillus cereus AH1272]
gi|228745508|gb|EEL95532.1| YihY [Bacillus cereus AH1273]
Length = 289
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|229074335|ref|ZP_04207373.1| YihY [Bacillus cereus Rock4-18]
gi|229095110|ref|ZP_04226105.1| YihY [Bacillus cereus Rock3-29]
gi|229101212|ref|ZP_04231976.1| YihY [Bacillus cereus Rock3-28]
gi|229114064|ref|ZP_04243489.1| YihY [Bacillus cereus Rock1-3]
gi|228669334|gb|EEL24751.1| YihY [Bacillus cereus Rock1-3]
gi|228682180|gb|EEL36293.1| YihY [Bacillus cereus Rock3-28]
gi|228688295|gb|EEL42178.1| YihY [Bacillus cereus Rock3-29]
gi|228708777|gb|EEL60912.1| YihY [Bacillus cereus Rock4-18]
Length = 288
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMYLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G IF + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGAIFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|118476162|ref|YP_893313.1| ribonuclease BN [Bacillus thuringiensis str. Al Hakam]
gi|196045195|ref|ZP_03112427.1| YihY family protein [Bacillus cereus 03BB108]
gi|225862450|ref|YP_002747828.1| YihY family protein [Bacillus cereus 03BB102]
gi|229182794|ref|ZP_04310033.1| YihY [Bacillus cereus BGSC 6E1]
gi|118415387|gb|ABK83806.1| ribonuclease BN [Bacillus thuringiensis str. Al Hakam]
gi|196023779|gb|EDX62454.1| YihY family protein [Bacillus cereus 03BB108]
gi|225790204|gb|ACO30421.1| YihY family protein [Bacillus cereus 03BB102]
gi|228600674|gb|EEK58255.1| YihY [Bacillus cereus BGSC 6E1]
Length = 289
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 14/273 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFIYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYRTSD 282
>gi|229171254|ref|ZP_04298844.1| YihY [Bacillus cereus MM3]
gi|228612211|gb|EEK69443.1| YihY [Bacillus cereus MM3]
Length = 289
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G IF + W++ + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGAIFATVGWIMVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|189183815|ref|YP_001937600.1| hypothetical protein OTT_0908 [Orientia tsutsugamushi str. Ikeda]
gi|189180586|dbj|BAG40366.1| hypothetical protein OTT_0908 [Orientia tsutsugamushi str. Ikeda]
Length = 281
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 132/278 (47%), Gaps = 20/278 (7%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
AI +E DG A +++ LLS+FPF++F + FLG + I ++ P
Sbjct: 11 QAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGIAILLSNLPAN 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+A+ I I ++L P + L T++ + SS+ VE +R LNR ++V +++ RL
Sbjct: 71 VAETIVPRIHEILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVNSPPPYWLRRL 130
Query: 134 ISFGYVLLASVT--LVIMSFVFV-----AIPLALAYVRKFFPALGNLLLIIWNGRIYA-T 185
+S L+ S+ L I+ FVF IP + + + P IW Y
Sbjct: 131 LSITQFLITSIIIFLTIVLFVFTPIILRKIPTTIVFTKTLSP--------IWILLRYTFI 182
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L LF + ++ F+P K ++PG I T + W+ + + +S + +Y L
Sbjct: 183 VLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYGSL 242
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI----IYYWRK 279
SI+ L+F +++ + FI GAE N ++ YW K
Sbjct: 243 GSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKKYWHK 280
>gi|229154172|ref|ZP_04282296.1| YihY [Bacillus cereus ATCC 4342]
gi|228629308|gb|EEK86011.1| YihY [Bacillus cereus ATCC 4342]
Length = 289
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMSLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRKEVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|47567234|ref|ZP_00237948.1| ribonuclease BN, putative [Bacillus cereus G9241]
gi|228983665|ref|ZP_04143867.1| YihY [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|47556077|gb|EAL14414.1| ribonuclease BN, putative [Bacillus cereus G9241]
gi|228776072|gb|EEM24436.1| YihY [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 289
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMSLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|30260576|ref|NP_842953.1| ribonuclease BN, putative [Bacillus anthracis str. Ames]
gi|42779603|ref|NP_976850.1| ribonuclease BN, putative [Bacillus cereus ATCC 10987]
gi|47525680|ref|YP_017029.1| ribonuclease BN [Bacillus anthracis str. 'Ames Ancestor']
gi|49183423|ref|YP_026675.1| ribonuclease BN [Bacillus anthracis str. Sterne]
gi|49480098|ref|YP_034736.1| ribonuclease BN [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52144837|ref|YP_081992.1| ribonuclease BN [Bacillus cereus E33L]
gi|65317837|ref|ZP_00390796.1| COG1295: Predicted membrane protein [Bacillus anthracis str. A2012]
gi|165870787|ref|ZP_02215440.1| YihY family protein [Bacillus anthracis str. A0488]
gi|167634706|ref|ZP_02393025.1| YihY family protein [Bacillus anthracis str. A0442]
gi|167641273|ref|ZP_02399526.1| YihY family protein [Bacillus anthracis str. A0193]
gi|170688965|ref|ZP_02880166.1| YihY family protein [Bacillus anthracis str. A0465]
gi|170707108|ref|ZP_02897564.1| YihY family protein [Bacillus anthracis str. A0389]
gi|177654535|ref|ZP_02936391.1| YihY family protein [Bacillus anthracis str. A0174]
gi|190567539|ref|ZP_03020452.1| YihY family protein [Bacillus anthracis Tsiankovskii-I]
gi|217958004|ref|YP_002336548.1| YihY family protein [Bacillus cereus AH187]
gi|222094204|ref|YP_002528261.1| ribonuclease bn [Bacillus cereus Q1]
gi|227813080|ref|YP_002813089.1| YihY family protein [Bacillus anthracis str. CDC 684]
gi|228913156|ref|ZP_04076795.1| YihY [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229089528|ref|ZP_04220797.1| YihY [Bacillus cereus Rock3-42]
gi|229137270|ref|ZP_04265886.1| YihY [Bacillus cereus BDRD-ST26]
gi|229194786|ref|ZP_04321574.1| YihY [Bacillus cereus m1293]
gi|229604696|ref|YP_002865023.1| YihY family protein [Bacillus anthracis str. A0248]
gi|254686797|ref|ZP_05150655.1| YihY family protein [Bacillus anthracis str. CNEVA-9066]
gi|254724872|ref|ZP_05186655.1| YihY family protein [Bacillus anthracis str. A1055]
gi|254738978|ref|ZP_05196680.1| YihY family protein [Bacillus anthracis str. Western North America
USA6153]
gi|254744565|ref|ZP_05202244.1| YihY family protein [Bacillus anthracis str. Kruger B]
gi|254756177|ref|ZP_05208206.1| YihY family protein [Bacillus anthracis str. Vollum]
gi|254761995|ref|ZP_05213844.1| YihY family protein [Bacillus anthracis str. Australia 94]
gi|300119033|ref|ZP_07056744.1| YihY family protein [Bacillus cereus SJ1]
gi|4584097|emb|CAB40586.1| yfkH [Bacillus cereus ATCC 10987]
gi|30253944|gb|AAP24439.1| YihY family protein [Bacillus anthracis str. Ames]
gi|42735519|gb|AAS39458.1| ribonuclease BN, putative [Bacillus cereus ATCC 10987]
gi|47500828|gb|AAT29504.1| YihY family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49177350|gb|AAT52726.1| ribonuclease BN, putative [Bacillus anthracis str. Sterne]
gi|49331654|gb|AAT62300.1| probable ribonuclease BN [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51978306|gb|AAU19856.1| probable ribonuclease BN [Bacillus cereus E33L]
gi|164713621|gb|EDR19145.1| YihY family protein [Bacillus anthracis str. A0488]
gi|167510781|gb|EDR86174.1| YihY family protein [Bacillus anthracis str. A0193]
gi|167529780|gb|EDR92528.1| YihY family protein [Bacillus anthracis str. A0442]
gi|170127886|gb|EDS96757.1| YihY family protein [Bacillus anthracis str. A0389]
gi|170667066|gb|EDT17828.1| YihY family protein [Bacillus anthracis str. A0465]
gi|172080647|gb|EDT65730.1| YihY family protein [Bacillus anthracis str. A0174]
gi|190561326|gb|EDV15298.1| YihY family protein [Bacillus anthracis Tsiankovskii-I]
gi|217067694|gb|ACJ81944.1| YihY family protein [Bacillus cereus AH187]
gi|221238259|gb|ACM10969.1| probable ribonuclease BN [Bacillus cereus Q1]
gi|227003880|gb|ACP13623.1| YihY family protein [Bacillus anthracis str. CDC 684]
gi|228588697|gb|EEK46727.1| YihY [Bacillus cereus m1293]
gi|228646173|gb|EEL02391.1| YihY [Bacillus cereus BDRD-ST26]
gi|228693835|gb|EEL47529.1| YihY [Bacillus cereus Rock3-42]
gi|228846561|gb|EEM91574.1| YihY [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229269104|gb|ACQ50741.1| YihY family protein [Bacillus anthracis str. A0248]
gi|298723649|gb|EFI64380.1| YihY family protein [Bacillus cereus SJ1]
gi|324324508|gb|ADY19768.1| YihY family protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 289
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|110802092|ref|YP_697602.1| YihY family protein [Clostridium perfringens SM101]
gi|110682593|gb|ABG85963.1| YihY family protein [Clostridium perfringens SM101]
Length = 283
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 133/256 (51%), Gaps = 4/256 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+ ++D +A+ + ++ +LS PF++F NL GF +H T+++++ P
Sbjct: 20 IKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMNLVGF--SHLNSDTILNLLSNVMPTEAF 77
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I +++++ GL IS A + SS+G +A+ LN+AY V E RS+ +LIS
Sbjct: 78 NLIQSTVIEIVDKEQTGLLWISIALAIWVSSSGFKAVIKGLNKAYGVKETRSYIKLKLIS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLI 194
Y +L ++ ++ F+FV + + K ++ IWN R +L + + +
Sbjct: 138 MIYTILLALIVIATLFLFVFGDVIGDFFIKVLEH-PEVIYYIWNMLRYVVVILIMVLFFM 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F++ P + + ++PG + T + W+ + +F +Y+ FS YS +Y L ++ + +
Sbjct: 197 FLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRLYGSLGAVFMFMTW 256
Query: 255 LYMLGVFFILGAELNA 270
+++ + ILG E+NA
Sbjct: 257 MFITSMILILGGEINA 272
>gi|148284876|ref|YP_001248966.1| putative ribonuclease BN [Orientia tsutsugamushi str. Boryong]
gi|146740315|emb|CAM80715.1| putative ribonuclease BN [Orientia tsutsugamushi str. Boryong]
Length = 281
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 132/278 (47%), Gaps = 20/278 (7%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
AI +E DG A +++ LLS+FPF++F + FLG + I ++ P
Sbjct: 11 QAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGIAILLSNLPAN 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+A+ I I ++L P + L T++ + SS+ VE +R LNR ++V +++ RL
Sbjct: 71 VAETIVPRIHEILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVNCPPPYWLRRL 130
Query: 134 ISFGYVLLASVT--LVIMSFVFV-----AIPLALAYVRKFFPALGNLLLIIWNGRIYA-T 185
+S L+ S+ L I+ FVF IP + + + P IW Y
Sbjct: 131 LSITQFLITSIIIFLTIVLFVFTPIILRKIPTTIVFTKTLSP--------IWILLRYTFI 182
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L LF + ++ F+P K ++PG I T + W+ + + +S + +Y L
Sbjct: 183 VLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYGSL 242
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI----IYYWRK 279
SI+ L+F +++ + FI GAE N ++ YW K
Sbjct: 243 GSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKKYWHK 280
>gi|229028258|ref|ZP_04184396.1| YihY [Bacillus cereus AH1271]
gi|228733064|gb|EEL83908.1| YihY [Bacillus cereus AH1271]
Length = 289
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSIMRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|229159554|ref|ZP_04287568.1| YihY [Bacillus cereus R309803]
gi|228623856|gb|EEK80668.1| YihY [Bacillus cereus R309803]
Length = 287
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMYLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|239825980|ref|YP_002948604.1| ribonuclease BN [Geobacillus sp. WCH70]
gi|239806273|gb|ACS23338.1| ribonuclease BN [Geobacillus sp. WCH70]
Length = 277
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 137/264 (51%), Gaps = 12/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAW 70
I + + F +++ +++ ++ LLS+FPF++F L +L H+ ++ ++
Sbjct: 8 IREMVRRFQKDEIPRLSAELAYYFLLSLFPFLIFLFTLLAYLPIPHE---DILSIIRQYA 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + I +V+ L + S +AA + +SNG+ A+ + NRAY V E R ++I
Sbjct: 65 PKEALHLVEANIRRVMDDQNWKLLSFSIIAAIWSASNGMNAIVRAFNRAYDVEENRPFFI 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWNG-RIYATM 186
R G +L ++ ++ + V + +P+ + F F A G L IWN R +
Sbjct: 125 AR----GMSVLLTIGMIFVIIVALFLPVFGKTIGLFLFSAFGFSETFLTIWNALRWVISS 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF+ ++ F P K + +I+ G IF + W++ ++ F++Y+ F+ Y+ MY L
Sbjct: 181 FILFVVFTALYYFAPNKKLRCANIVRGAIFATVGWIMTSLAFSYYVNNFANYTAMYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
++ +V+ Y+ G+ +LG E+NA
Sbjct: 241 GMIILMVWFYLSGMIIVLGGEMNA 264
>gi|73662219|ref|YP_301000.1| hypothetical protein SSP0910 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494734|dbj|BAE18055.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 390
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 143/263 (54%), Gaps = 13/263 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++D +++ +S +LS+FP ++F ++ +G Q T+ D++ P A ++
Sbjct: 84 KDDASGLSAQLSYYFMLSLFPMLLFLLSIVPVVGVKQ--STIRDLIKDHVPSDYAPQVSG 141
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I ++ + GL +I +AA + +SNG+ AL + N AY V + R++ + +L Y +
Sbjct: 142 IIGDIMENASGGLLSIGLIAALWSASNGMTALMNAFNVAYDVEDSRNFVVAKL----YSV 197
Query: 141 LASVTLVIMSFVFVAIPLALAYVRK--FFP-ALGNLLLIIWNG-RIYATMLALFIGLIFV 196
L ++ ++I+ V + +P + F P LG+ + +++ R ++ + I + +
Sbjct: 198 LFTLAMIIVMPVALVLPTFGQQIGDLLFGPLGLGDQVKWLFDTIRFVLPVIVVLIAFMVL 257
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P K K++S++PG IF I ++ G+ LF YI F+ YS Y +A I+ +++LY
Sbjct: 258 YTLAPNVKIKLLSVIPGAIFATIVFLGGSYLFGIYISNFANYSKTYGSIAGIIILMLWLY 317
Query: 257 MLGVFFILGAELNASMIIYYWRK 279
+ G I+GAE+NA I++ RK
Sbjct: 318 ITGFIIIIGAEINA---IFHQRK 337
>gi|228906214|ref|ZP_04070101.1| YihY [Bacillus thuringiensis IBL 200]
gi|228919337|ref|ZP_04082707.1| YihY [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228956886|ref|ZP_04118667.1| YihY [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228963518|ref|ZP_04124675.1| YihY [Bacillus thuringiensis serovar sotto str. T04001]
gi|228796212|gb|EEM43663.1| YihY [Bacillus thuringiensis serovar sotto str. T04001]
gi|228802729|gb|EEM49565.1| YihY [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228840444|gb|EEM85715.1| YihY [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228853370|gb|EEM98140.1| YihY [Bacillus thuringiensis IBL 200]
Length = 289
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 16/271 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPE 72
D + + +D +A+ ++ LL++FP +VF L GF+ + V ++++V P+
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQTEDVLSLLEVYV---PD 75
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 76 DAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSFITTR 135
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATML 187
+S + L +I VF I V F ALG + +W+ R+ A+
Sbjct: 136 ALSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKALGLSDSFSFVWSITRLVASFF 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 191 VLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
I+ +++ Y+ G +LG E+N +++++R
Sbjct: 251 IIILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|329770330|ref|ZP_08261713.1| hypothetical protein HMPREF0433_01477 [Gemella sanguinis M325]
gi|328836688|gb|EGF86344.1| hypothetical protein HMPREF0433_01477 [Gemella sanguinis M325]
Length = 301
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 23/274 (8%)
Query: 5 FC--IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
FC + + I+YD I +++++S +LS+FP ++ L + Q +
Sbjct: 24 FCKEMYYRIMYDEIS--------LLSANLSYYFILSLFPMLIVAMALTPYFNIDQ--KFL 73
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYR 121
+D + P + I I +VL + L T+ + + +SNG+ + I+ N A+R
Sbjct: 74 LDKIQSFAPGELGDFIFGMISEVLNSKSNNTLITLGIVFTLWSASNGIYGIIIAFNNAFR 133
Query: 122 VVEMRSWYITRLISFGYVLLASVTL-VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + R W +T+L+S + +L V + ++++ V L KF NL +NG
Sbjct: 134 VRDGRIWIVTKLMSILFTVLFLVGMFLVLALVVFGKQLTYLLFHKF-----NLDEGFYNG 188
Query: 181 RIYAT----MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
Y + +L FI +F+++F P + K +SILPG +F+ ISW + + LF +YI FS
Sbjct: 189 WSYLSYSFPILFTFIVFVFLYIFGPNLRLKAISILPGAVFSTISWTLVSRLFGYYIDHFS 248
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+Y Y + + M +++LY+ G ILGAE+NA
Sbjct: 249 SYIKTYGTIGAFMAFIMWLYITGFILILGAEINA 282
>gi|154685267|ref|YP_001420428.1| YfkH [Bacillus amyloliquefaciens FZB42]
gi|154351118|gb|ABS73197.1| YfkH [Bacillus amyloliquefaciens FZB42]
Length = 279
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 21/277 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + F +G + ++ ++ LLS+FP ++F L +L P + V GA
Sbjct: 4 IKELFARFSLHEGQSKSAELAYFFLLSLFPLMIFMLTLTAYL------PISAEDVLGAVD 57
Query: 72 E-------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ + K IT+ Q L + GL + +A + +SNG+ A+ + N AY V E
Sbjct: 58 QYAPDSAMSMVKSITE---QTLNKRSGGLLSFGIIAVIWSASNGMNAIVRAFNHAYEVEE 114
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIY 183
RS+ I RL S ++ +A V ++++ + + + F L L +W+ R
Sbjct: 115 NRSFIIIRLTSI-FLTIAMVVTILIALLLPVFGREIGMLAADFIGASGLFLQVWSVVRWG 173
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L L I +++F P + + +LPG +F W++ ++LF+ Y+ TF+ YS Y
Sbjct: 174 ISPLILLIVFTALYIFAPNKRLSLRFVLPGAVFAAAGWIIVSMLFSFYVGTFANYSATYG 233
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ I+ +++ Y+ G ILG E+NA + + RKK
Sbjct: 234 SIGGIIVLMIWFYLTGTLLILGGEINA---LLHKRKK 267
>gi|30018660|ref|NP_830291.1| ribonuclease BN [Bacillus cereus ATCC 14579]
gi|75762510|ref|ZP_00742370.1| Ribonuclease BN [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|206967706|ref|ZP_03228662.1| YihY family protein [Bacillus cereus AH1134]
gi|218234197|ref|YP_002365252.1| YihY family protein [Bacillus cereus B4264]
gi|218895526|ref|YP_002443937.1| YihY family protein [Bacillus cereus G9842]
gi|228899127|ref|ZP_04063399.1| YihY [Bacillus thuringiensis IBL 4222]
gi|228937697|ref|ZP_04100333.1| YihY [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228950960|ref|ZP_04113081.1| YihY [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228970585|ref|ZP_04131235.1| YihY [Bacillus thuringiensis serovar thuringiensis str. T01001]
gi|228977155|ref|ZP_04137556.1| YihY [Bacillus thuringiensis Bt407]
gi|229042309|ref|ZP_04190060.1| YihY [Bacillus cereus AH676]
gi|229068157|ref|ZP_04201464.1| YihY [Bacillus cereus F65185]
gi|229077762|ref|ZP_04210390.1| YihY [Bacillus cereus Rock4-2]
gi|229108075|ref|ZP_04237700.1| YihY [Bacillus cereus Rock1-15]
gi|229125902|ref|ZP_04254927.1| YihY [Bacillus cereus BDRD-Cer4]
gi|229143195|ref|ZP_04271627.1| YihY [Bacillus cereus BDRD-ST24]
gi|229148807|ref|ZP_04277055.1| YihY [Bacillus cereus m1550]
gi|229176994|ref|ZP_04304389.1| YihY [Bacillus cereus 172560W]
gi|229188674|ref|ZP_04315713.1| YihY [Bacillus cereus ATCC 10876]
gi|296501234|ref|YP_003662934.1| ribonuclease BN [Bacillus thuringiensis BMB171]
gi|29894201|gb|AAP07492.1| Ribonuclease BN [Bacillus cereus ATCC 14579]
gi|74490006|gb|EAO53362.1| Ribonuclease BN [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|206736626|gb|EDZ53773.1| YihY family protein [Bacillus cereus AH1134]
gi|218162154|gb|ACK62146.1| YihY family protein [Bacillus cereus B4264]
gi|218544049|gb|ACK96443.1| YihY family protein [Bacillus cereus G9842]
gi|228594863|gb|EEK52643.1| YihY [Bacillus cereus ATCC 10876]
gi|228606469|gb|EEK63895.1| YihY [Bacillus cereus 172560W]
gi|228634601|gb|EEK91182.1| YihY [Bacillus cereus m1550]
gi|228640276|gb|EEK96674.1| YihY [Bacillus cereus BDRD-ST24]
gi|228657560|gb|EEL13373.1| YihY [Bacillus cereus BDRD-Cer4]
gi|228675350|gb|EEL30569.1| YihY [Bacillus cereus Rock1-15]
gi|228705553|gb|EEL57911.1| YihY [Bacillus cereus Rock4-2]
gi|228714971|gb|EEL66839.1| YihY [Bacillus cereus F65185]
gi|228727029|gb|EEL78235.1| YihY [Bacillus cereus AH676]
gi|228782603|gb|EEM30780.1| YihY [Bacillus thuringiensis Bt407]
gi|228789172|gb|EEM37101.1| YihY [Bacillus thuringiensis serovar thuringiensis str. T01001]
gi|228808687|gb|EEM55185.1| YihY [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228821984|gb|EEM67976.1| YihY [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228860568|gb|EEN04956.1| YihY [Bacillus thuringiensis IBL 4222]
gi|296322286|gb|ADH05214.1| ribonuclease BN [Bacillus thuringiensis BMB171]
gi|326938192|gb|AEA14088.1| ribonuclease BN [Bacillus thuringiensis serovar chinensis CT-43]
Length = 288
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 16/271 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPE 72
D + + +D +A+ ++ LL++FP +VF L GF+ + V ++++V P+
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQTEDVLSLLEVYV---PD 75
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 76 DAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSFITTR 135
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATML 187
+S + L +I VF I V F ALG + +W+ R+ A+
Sbjct: 136 ALSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKALGLSDSFSFVWSITRLVASFF 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 191 VLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
I+ +++ Y+ G +LG E+N +++++R
Sbjct: 251 IIILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|312112319|ref|YP_003990635.1| ribonuclease BN [Geobacillus sp. Y4.1MC1]
gi|311217420|gb|ADP76024.1| ribonuclease BN [Geobacillus sp. Y4.1MC1]
Length = 275
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 137/264 (51%), Gaps = 12/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAW 70
I + F E++ +++ ++ LLS+FPF++F L +L H+ ++ V+
Sbjct: 8 IREMARRFQEDEIPRLSAELAYYFLLSLFPFLIFLITLLAYLPIPHE---DLLSVIRQYA 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + +V+ L ++S + A + +SNG+ A+ + NRAY VVE R + +
Sbjct: 65 PKEAIHLVEANVHRVMDEQNGRLLSLSIIGAIWSASNGMNAIVRAFNRAYDVVENRPFLV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWNG-RIYATM 186
R G +L ++ ++++ V + +P+ + F F A G L IWN R +
Sbjct: 125 AR----GMSVLLTIGMIVVIIVALVLPVFGKMIGLFLFSAFGFSATFLTIWNAMRWVISS 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L LF ++ F P K + +++ G IF I W++ ++ F++Y+ F+ Y+ MY L
Sbjct: 181 LILFAVFTALYYFAPNKKLRCANVVRGAIFATIGWIITSLAFSYYVNHFAHYAAMYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
++ +V+ Y+ G+ +LG E+NA
Sbjct: 241 GMIILMVWFYLSGMIIVLGGEMNA 264
>gi|301052124|ref|YP_003790335.1| putative ribonuclease BN [Bacillus anthracis CI]
gi|300374293|gb|ADK03197.1| probable ribonuclease BN [Bacillus cereus biovar anthracis str. CI]
Length = 289
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 132/266 (49%), Gaps = 6/266 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIG 192
+S + L +V V V + A V K L + +W+ R+ A+ LF
Sbjct: 137 LSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKVI-GLSDSFSYVWSITRLVASFFVLFAL 195
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I+ +
Sbjct: 196 FSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGIIILM 255
Query: 253 VFLYMLGVFFILGAELNASMIIYYWR 278
++ Y+ G +LG E+N +++++R
Sbjct: 256 LWFYLTGWVILLGGEING--LLHHYR 279
>gi|228995781|ref|ZP_04155441.1| YihY [Bacillus mycoides Rock3-17]
gi|229003401|ref|ZP_04161222.1| YihY [Bacillus mycoides Rock1-4]
gi|228757849|gb|EEM07073.1| YihY [Bacillus mycoides Rock1-4]
gi|228763942|gb|EEM12829.1| YihY [Bacillus mycoides Rock3-17]
Length = 289
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 10/271 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLLEAYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMNLIEVNVDKVVNEQNGGLLSFGLLSTLWFASNGVNAVMNAFNRAYDVKETRSFIATRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLLIIWNG-RIYATMLALF 190
+S ++L + ++ F + F ALG +W+ R+ A+ L LF
Sbjct: 137 LS---IVLTLAMIFMIVFALIVPVFGQVIGAAVFKALGLSESFSFVWSIIRLVASFLVLF 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL I+
Sbjct: 194 ALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGGIII 253
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+++ Y+ +LG E+N +++++R
Sbjct: 254 LMLWFYLTAWVILLGGEING--LLHFYRTSD 282
>gi|229165407|ref|ZP_04293191.1| YihY [Bacillus cereus AH621]
gi|228618005|gb|EEK75046.1| YihY [Bacillus cereus AH621]
Length = 288
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 135/274 (49%), Gaps = 16/274 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPE 72
D + + +D +A+ ++ LL++FP +VF L GF+ + V ++++V P+
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQTEDVLSLLEVYV---PD 75
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 76 DAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSFIKTR 135
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATML 187
+S + L +I VF I V F ALG + +W+ R+ A+
Sbjct: 136 ALSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKALGLSDSFSYVWSITRLVASFF 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 191 VLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
I+ +++ Y+ G +LG E+N +++++R
Sbjct: 251 IIILMLWFYLTGWVILLGGEING--LLHHYRTDD 282
>gi|228989594|ref|ZP_04149578.1| YihY [Bacillus pseudomycoides DSM 12442]
gi|228770131|gb|EEM18711.1| YihY [Bacillus pseudomycoides DSM 12442]
Length = 289
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 10/271 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLLEAYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMNLIEVNVDKVVNEQNGGLLSFGLLSTLWFASNGVNAVMNAFNRAYDVKETRSFIATRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLLIIWNG-RIYATMLALF 190
+S ++L + ++ F + F ALG +W+ R+ A+ L LF
Sbjct: 137 LS---IVLTLAMIFMIVFALIVPVFGQVIGAAVFKALGLSESFSFVWSIIRLVASFLVLF 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL I+
Sbjct: 194 ALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGGIII 253
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+++ Y+ +LG E+N +++++R
Sbjct: 254 LMLWFYLTAWVILLGGEING--LLHFYRTSD 282
>gi|125974669|ref|YP_001038579.1| putative ribonuclease BN [Clostridium thermocellum ATCC 27405]
gi|256004132|ref|ZP_05429116.1| ribonuclease BN [Clostridium thermocellum DSM 2360]
gi|281418859|ref|ZP_06249878.1| ribonuclease BN [Clostridium thermocellum JW20]
gi|125714894|gb|ABN53386.1| putative ribonuclease BN [Clostridium thermocellum ATCC 27405]
gi|255991880|gb|EEU01978.1| ribonuclease BN [Clostridium thermocellum DSM 2360]
gi|281407943|gb|EFB38202.1| ribonuclease BN [Clostridium thermocellum JW20]
gi|316941794|gb|ADU75828.1| ribonuclease BN [Clostridium thermocellum DSM 1313]
Length = 276
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 30/277 (10%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-----GAHQFVPTVID 64
+II D ++D A+A+ ++ +L++FPF++F L + A F ++
Sbjct: 11 EIIKDIYTRSRDDDVPALAAQLTYYFILALFPFLIFLITLLSYTPITGEEAMNFFARIL- 69
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + + D + ++ A P + + +AA + SSNG++A+ +N+AY E
Sbjct: 70 ------PPLAFNAVLDVVNEITASPRETFLSFGMIAALWASSNGMKAVIRGINKAYDQKE 123
Query: 125 MRSWYITRLISFGYVLLASVT----LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R +++ RLIS V++ + T L ++ F A + R FP I+ G
Sbjct: 124 TRPFWMVRLISLVAVIILAFTVIFSLALLLFGETAEKELFYHFR--FPN-------IYRG 174
Query: 181 -----RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
R ++ +F I +++ P+ + + +LPG F+ +SW++ LF+ YI F
Sbjct: 175 VCTTVRFLLPVILMFCVFILLYMLTPSRRLSLKEVLPGSAFSALSWILVTTLFSLYINNF 234
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ +S MY + I+ LV+LY + + +LG ELNAS+
Sbjct: 235 ADFSKMYGSIGGIIALLVWLYWISIIIMLGGELNASL 271
>gi|295400591|ref|ZP_06810569.1| ribonuclease BN [Geobacillus thermoglucosidasius C56-YS93]
gi|294977494|gb|EFG53094.1| ribonuclease BN [Geobacillus thermoglucosidasius C56-YS93]
Length = 275
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 137/264 (51%), Gaps = 12/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAW 70
I + F E++ +++ ++ LLS+FPF++F L +L H+ ++ V+
Sbjct: 8 IREMARRFQEDEIPRLSAELAYYFLLSLFPFLIFLITLLAYLPIPHE---DLLSVIRQYA 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + +V+ L ++S + A + +SNG+ A+ + NRAY VVE R + +
Sbjct: 65 PKEAIHLVEANVHRVMDEQNGRLLSLSIIGAIWSASNGMNAIVRAFNRAYDVVENRPFLV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWNG-RIYATM 186
R G +L ++ ++++ V + +P+ + F F A G L IWN R +
Sbjct: 125 AR----GMSVLLTLGMIVVIIVALVLPVFGKMIGLFLFSAFGFSATFLTIWNAMRWVISS 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L LF ++ F P K + +++ G IF I W++ ++ F++Y+ F+ Y+ MY L
Sbjct: 181 LILFAVFTALYYFAPNKKLRCANVVRGAIFATIGWIITSLAFSYYVNHFAHYAAMYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
++ +V+ Y+ G+ +LG E+NA
Sbjct: 241 GMIILMVWFYLSGMIIVLGGEMNA 264
>gi|328552413|gb|AEB22905.1| integral inner membrane protein with ribonuclease fold [Bacillus
amyloliquefaciens TA208]
gi|328910764|gb|AEB62360.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus amyloliquefaciens LL3]
Length = 279
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE----- 72
F +G + ++ ++ LLS+FP I+F L +L P + V GA +
Sbjct: 10 RFSLHEGQSKSAELAYFFLLSLFPLIIFILTLTAYL------PISAEDVLGAVDQYAPDS 63
Query: 73 --VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ K IT+ Q L + GL + +A + +SNG+ A+ + N AY V E RS+ I
Sbjct: 64 AMSMVKSITE---QTLNKRSGGLLSFGIIAVIWSASNGMNAIVRAFNHAYEVEENRSFII 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLAL 189
RL S ++ +A V ++++ + + + F L L +W+ R + L L
Sbjct: 121 IRLTSI-FLTIAMVVTILIALLLPVFGREIGLLAADFIGAPGLFLQVWSVVRWGISPLIL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++F P + + +LPG +F W++ ++LF+ Y+ TF+ YS Y + I+
Sbjct: 180 LIVFTALYIFAPNKRLSLRFVLPGAVFAAAGWIIVSMLFSFYVGTFANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ Y+ G ILG E+NA + + RKK
Sbjct: 240 VLMIWFYLTGTLLILGGEINA---LLHKRKK 267
>gi|308172652|ref|YP_003919357.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7]
gi|307605516|emb|CBI41887.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus amyloliquefaciens DSM 7]
Length = 279
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE----- 72
F +G + ++ ++ LLS+FP I+F L +L P + V GA +
Sbjct: 10 RFSLHEGQSKSAELAYFFLLSLFPLIIFILTLTAYL------PISAEDVLGAVDQYAPDS 63
Query: 73 --VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ K IT+ Q L + GL + +A + +SNG+ A+ + N AY V E RS+ I
Sbjct: 64 AMSMVKSITE---QTLNKRSGGLLSFGIIAVIWSASNGMNAIVRAFNHAYEVEENRSFII 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLAL 189
RL S ++ +A V ++++ + + + F L L +W+ R + L L
Sbjct: 121 LRLTSI-FLTIAMVVTILIALLLPVFGREIGLLAADFIGAPGLFLKVWSVVRWGISPLIL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++F P + + +LPG +F W++ ++LF+ Y+ TF+ YS Y + I+
Sbjct: 180 LIVFTALYIFAPNKRLSLRFVLPGAVFAAAGWIIVSMLFSFYVGTFANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ Y+ G ILG E+NA + + RKK
Sbjct: 240 VLMIWFYLTGTLLILGGEINA---LLHKRKK 267
>gi|196040219|ref|ZP_03107521.1| YihY family protein [Bacillus cereus NVH0597-99]
gi|196029074|gb|EDX67679.1| YihY family protein [Bacillus cereus NVH0597-99]
Length = 289
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 132/270 (48%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F +G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKEIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|168212796|ref|ZP_02638421.1| YihY family protein [Clostridium perfringens CPE str. F4969]
gi|170715733|gb|EDT27915.1| YihY family protein [Clostridium perfringens CPE str. F4969]
Length = 283
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 4/256 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+ ++D +A+ + ++ +LS PF++F L GF +H V++++ P
Sbjct: 20 IKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGF--SHLNSDAVLNLLSNVMPTEAF 77
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I +++++ GL IS A + SS+G +A+ LN+AY V E RS+ +LIS
Sbjct: 78 NLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYGVKETRSYIKLKLIS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y +L ++ ++ F+FV + + K L+ IWN R +L + + +
Sbjct: 138 MIYTILLALIVIATLFLFVFGDVIGDFFMKVLEH-PELIYYIWNILRYVVVILIMILFFM 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F++ P + + ++PG + T + W+ + +F +Y+ FS YS +Y L ++ + +
Sbjct: 197 FLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRLYGSLGAVFMFMTW 256
Query: 255 LYMLGVFFILGAELNA 270
+++ + ILG E+NA
Sbjct: 257 MFITSMILILGGEINA 272
>gi|170755009|ref|YP_001783041.1| YihY family protein [Clostridium botulinum B1 str. Okra]
gi|169120221|gb|ACA44057.1| YihY family protein [Clostridium botulinum B1 str. Okra]
Length = 285
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 134/264 (50%), Gaps = 16/264 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA---WPEV 73
F+E++ A++S ++ + ++SVFPF++F L G+L H D++ G P
Sbjct: 18 NRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHSE-----DLLLGLKEIMPSN 72
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ ++
Sbjct: 73 TYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFIKVQI 132
Query: 134 ISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ L + LV+ F+ V I L Y F IWN Y M+ +
Sbjct: 133 MTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNR----IWNLIRYIIMIGVT 188
Query: 191 IGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ ++ + P+ + + M +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 189 IFILAALYYYTPSKRLRWMDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVI 248
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
LV+LY+ + I G E+NA ++
Sbjct: 249 VFLVWLYLTSIIVITGGEINALLV 272
>gi|52079254|ref|YP_078045.1| RNase YfkH [Bacillus licheniformis ATCC 14580]
gi|52784619|ref|YP_090448.1| YfkH [Bacillus licheniformis ATCC 14580]
gi|319646964|ref|ZP_08001192.1| YfkH protein [Bacillus sp. BT1B_CT2]
gi|52002465|gb|AAU22407.1| Possible RNase YfkH [Bacillus licheniformis ATCC 14580]
gi|52347121|gb|AAU39755.1| YfkH [Bacillus licheniformis ATCC 14580]
gi|317391023|gb|EFV71822.1| YfkH protein [Bacillus sp. BT1B_CT2]
Length = 271
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 123/264 (46%), Gaps = 22/264 (8%)
Query: 19 FVEEDGWAMASHISLSA--------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
F++E GW H S LLS+FPF++F L G+L P V G
Sbjct: 3 FLKELGWRFFLHEGPSKSAELAYFFLLSLFPFMIFLLTLIGYL------PVKTGDVIGLI 56
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + I + L +GL + +AA + +SNG+ A+ + N AY V E RS+ +
Sbjct: 57 EQYAPEDTMSVIEETLNTGNRGLLSFGIIAALWSASNGLNAIVRAFNHAYEVEENRSFIM 116
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG---NLLLIIWNG-RIYATM 186
RL S LL + +V V + +P+ + F L + L W+ R +
Sbjct: 117 VRLTS----LLLTAAMVFTILVALLLPVFGRAIGHFIANLDGTPEMFLTAWSALRWGISP 172
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L I ++ F P + +LPG + W++ +VLF++Y+ F+ YS Y L
Sbjct: 173 LVLLIVFTALYFFAPNKRLSFKFVLPGAVAATAGWILVSVLFSYYVSEFANYSATYGSLG 232
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
I+ +++ Y+ G+ ILG E+NA
Sbjct: 233 GIIVLMIWFYLSGMMIILGGEINA 256
>gi|163938399|ref|YP_001643283.1| putative ribonuclease BN [Bacillus weihenstephanensis KBAB4]
gi|229056246|ref|ZP_04195667.1| YihY [Bacillus cereus AH603]
gi|163860596|gb|ABY41655.1| putative ribonuclease BN [Bacillus weihenstephanensis KBAB4]
gi|228721051|gb|EEL72589.1| YihY [Bacillus cereus AH603]
Length = 289
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 132/270 (48%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L F++ F P K K ++ G IF + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LIALFSFLYTFAPDRKLKRREVISGAIFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ +LG E+N +++++R
Sbjct: 252 IILMLWFYLTAWVILLGGEING--LLHHYR 279
>gi|229131406|ref|ZP_04260303.1| YihY [Bacillus cereus BDRD-ST196]
gi|228652052|gb|EEL07992.1| YihY [Bacillus cereus BDRD-ST196]
Length = 289
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 132/270 (48%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L F++ F P K K ++ G IF + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LIALFSFLYTFAPDRKLKRREVISGAIFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ +LG E+N +++++R
Sbjct: 252 IILMLWFYLTAWVILLGGEING--LLHHYR 279
>gi|187776658|ref|ZP_02993131.1| hypothetical protein CLOSPO_00173 [Clostridium sporogenes ATCC
15579]
gi|187775317|gb|EDU39119.1| hypothetical protein CLOSPO_00173 [Clostridium sporogenes ATCC
15579]
Length = 285
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 141/280 (50%), Gaps = 18/280 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F I+ I + F+E++ A++S ++ + ++SVFPF++F L G+L H
Sbjct: 3 KNLFKIIPKGIKELTNRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHSE--- 59
Query: 62 VIDVVFGAWPEVIAKP----ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
D++ G E+I + + I +++ L + S + + +S G A+ LN
Sbjct: 60 --DLLLGL-KEIIPSNAYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLN 116
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALGNLL 174
+AY V E RS+ ++++ L + LV+ F+ V I L Y F
Sbjct: 117 KAYDVKERRSFVKVQIMTIFCTLGMAFVLVMSIFLLVFGRTIGRTLVYKLGFSWEFNR-- 174
Query: 175 LIIWNGRIYATMLALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
IWN Y M+ + I ++ ++ + P+ + + +LPG IF I+W++ ++ F+ Y+
Sbjct: 175 --IWNLIRYTIMIGVTIFILAALYYYTPSKRLRWRDVLPGSIFATIAWIIASMGFSFYVD 232
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
F+ YS +Y + +++ LV+LY+ + I G E+NA ++
Sbjct: 233 NFNNYSRLYGSIGAVIVFLVWLYLTSIIVITGGEINALLV 272
>gi|18309267|ref|NP_561201.1| YihY family protein [Clostridium perfringens str. 13]
gi|110799841|ref|YP_694741.1| YihY family protein [Clostridium perfringens ATCC 13124]
gi|168207453|ref|ZP_02633458.1| YihY family protein [Clostridium perfringens E str. JGS1987]
gi|168210398|ref|ZP_02636023.1| YihY family protein [Clostridium perfringens B str. ATCC 3626]
gi|18143943|dbj|BAB79991.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|110674488|gb|ABG83475.1| YihY family protein [Clostridium perfringens ATCC 13124]
gi|170661202|gb|EDT13885.1| YihY family protein [Clostridium perfringens E str. JGS1987]
gi|170711461|gb|EDT23643.1| YihY family protein [Clostridium perfringens B str. ATCC 3626]
Length = 283
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 130/256 (50%), Gaps = 4/256 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+ ++D +A+ + ++ +LS PF++F L GF +H V++++ P
Sbjct: 20 IKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGF--SHLNSDAVLNLLSNVMPTEAF 77
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I +++++ GL IS A + SS+G +A+ LN+AY V E RS+ +LIS
Sbjct: 78 NLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYGVKETRSYIKLKLIS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLI 194
Y +L ++ ++ F+FV + + K + IWN R +L + + +
Sbjct: 138 MIYTILLALIVIATLFLFVFGDVIGDFFMKVLEH-PEFIYYIWNMLRYVVVILIMILFFM 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F++ P + + ++PG + T + W+ + +F +Y+ FS YS +Y L ++ + +
Sbjct: 197 FLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRLYGSLGAVFMFMTW 256
Query: 255 LYMLGVFFILGAELNA 270
+++ + ILG E+NA
Sbjct: 257 MFITSMILILGGEINA 272
>gi|56416749|ref|YP_153823.1| hypothetical protein AM555 [Anaplasma marginale str. St. Maries]
gi|222475113|ref|YP_002563529.1| hypothetical protein AMF_412 [Anaplasma marginale str. Florida]
gi|56387981|gb|AAV86568.1| hypothetical protein AM555 [Anaplasma marginale str. St. Maries]
gi|222419250|gb|ACM49273.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 295
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 126/260 (48%), Gaps = 12/260 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQ-FVPTVIDVVFGA 69
AI F DG + +++ LL+ FPF+VF + L H+ F+ ++ +
Sbjct: 36 AIADFRRHDGLVYSGYLAFIFLLATFPFLVFFTAMTSTALNVLDKHEDFLQGLVTSLLSE 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV +
Sbjct: 96 LPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRVSAPPPYI 155
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++S L+ + ++ V +P+ L + + + LG + + +L L
Sbjct: 156 LGRMLSILQFLVIVLVMMFSVLFIVFVPIVLDVLDQKWGYLGYI-----KYTLSEVILCL 210
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L++ +P + +I ILPG + I W + F+ Y+ F TMY L+ I+
Sbjct: 211 SVALLY--FMVPNTRQRIGVILPGAVVVTILWTASSFTFSWYLSNFRVLHTMYGNLSGII 268
Query: 250 TCLVFLYMLGVFFILGAELN 269
++F Y+L +FFI GAEL+
Sbjct: 269 ASMLFFYILSIFFIYGAELS 288
>gi|255004219|ref|ZP_05279020.1| hypothetical protein AmarV_02438 [Anaplasma marginale str.
Virginia]
Length = 281
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 126/260 (48%), Gaps = 12/260 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA----GFLGAHQ-FVPTVIDVVFGA 69
AI F DG + +++ LL+ FPF+VF + L H+ F+ ++ +
Sbjct: 22 AIADFRRHDGLVYSGYLAFIFLLATFPFLVFFTAMTSTALNVLDKHEDFLQGLVTSLLSE 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV +
Sbjct: 82 LPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRVSAPPPYI 141
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++S L+ + ++ V +P+ L + + + LG + + +L L
Sbjct: 142 LGRMLSILQFLVIVLVMMFSVLFIVFVPIVLDVLDQKWGYLGYI-----KYTLSEVILCL 196
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L++ +P + +I ILPG + I W + F+ Y+ F TMY L+ I+
Sbjct: 197 SVALLY--FMVPNTRQRIGVILPGAVVVTILWTASSFTFSWYLSNFRVLHTMYGNLSGII 254
Query: 250 TCLVFLYMLGVFFILGAELN 269
++F Y+L +FFI GAEL+
Sbjct: 255 ASMLFFYILSIFFIYGAELS 274
>gi|169344091|ref|ZP_02865077.1| YihY family protein [Clostridium perfringens C str. JGS1495]
gi|169297826|gb|EDS79923.1| YihY family protein [Clostridium perfringens C str. JGS1495]
Length = 283
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 130/256 (50%), Gaps = 4/256 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+ ++D +A+ + ++ +LS PF++F L GF +H V++++ P
Sbjct: 20 IKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGF--SHLNSDAVLNLLSNVMPTEAF 77
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I +++++ GL IS A + SS+G +A+ LN+AY V E RS+ +LIS
Sbjct: 78 NLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYGVKENRSYIKLKLIS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLI 194
Y +L ++ ++ F+FV + + K + IWN R +L + + +
Sbjct: 138 MIYTILLALIVIATLFLFVFGDVIGDFFMKVLEH-PEFIYYIWNMLRYVVVILIMILFFM 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F++ P + + ++PG + T + W+ + +F +Y+ FS YS +Y L ++ + +
Sbjct: 197 FLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRLYGSLGAVFMFMTW 256
Query: 255 LYMLGVFFILGAELNA 270
+++ + ILG E+NA
Sbjct: 257 MFITSMILILGGEINA 272
>gi|226950854|ref|YP_002805945.1| YihY family protein [Clostridium botulinum A2 str. Kyoto]
gi|226843946|gb|ACO86612.1| YihY family protein [Clostridium botulinum A2 str. Kyoto]
gi|322807727|emb|CBZ05302.1| ribonuclease BN [Clostridium botulinum H04402 065]
Length = 285
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 138/279 (49%), Gaps = 16/279 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F I+ I F+E++ A++S ++ + ++SVFPF++F L G+L H
Sbjct: 3 KNLFKIIPKSIKKLANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHSE--- 59
Query: 62 VIDVVFGA---WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
D++ G P + + I +++ L + S + + +S G A+ LNR
Sbjct: 60 --DLLLGLKEIMPSNTYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNR 117
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALGNLLL 175
AY V E RS+ ++++ L + LV+ F+ V I L Y F
Sbjct: 118 AYDVKERRSFVKVQIMTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNR--- 174
Query: 176 IIWNGRIYATMLALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
IWN Y M+ + I ++ ++ + P+ + + +LPG IF I+W++ ++ F+ Y+
Sbjct: 175 -IWNLIRYIIMIGVTIFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDN 233
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
F+ YS +Y + +++ LV+LY+ + I G E+NA ++
Sbjct: 234 FNNYSRLYGSIGAVIVFLVWLYLTSIIVITGGEINALLV 272
>gi|168216626|ref|ZP_02642251.1| YihY family protein [Clostridium perfringens NCTC 8239]
gi|182626819|ref|ZP_02954556.1| YihY family protein [Clostridium perfringens D str. JGS1721]
gi|177907828|gb|EDT70428.1| YihY family protein [Clostridium perfringens D str. JGS1721]
gi|182381516|gb|EDT78995.1| YihY family protein [Clostridium perfringens NCTC 8239]
Length = 283
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 130/256 (50%), Gaps = 4/256 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+ ++D +A+ + ++ +LS PF++F L GF +H V++++ P
Sbjct: 20 IKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGF--SHLNSDAVLNLLSNVMPTEAF 77
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I +++++ GL IS A + SS+G +A+ LN+AY V E RS+ +LIS
Sbjct: 78 NLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYGVKETRSYIKLKLIS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y +L ++ ++ F+FV + + K + IWN R +L + + +
Sbjct: 138 MIYTILLALIVIATLFLFVFGDVIGDFFMKVLEH-PEFIYYIWNILRYVVVILIMILFFM 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F++ P + + ++PG + T + W+ + +F +Y+ FS YS +Y L ++ + +
Sbjct: 197 FLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRLYGSLGAVFMFMTW 256
Query: 255 LYMLGVFFILGAELNA 270
+++ + ILG E+NA
Sbjct: 257 MFITSMILILGGEINA 272
>gi|170760762|ref|YP_001788733.1| YihY family protein [Clostridium botulinum A3 str. Loch Maree]
gi|169407751|gb|ACA56162.1| YihY family protein [Clostridium botulinum A3 str. Loch Maree]
Length = 285
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 134/264 (50%), Gaps = 16/264 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA---WPEV 73
F+E++ A++S ++ + ++SVFPF++F L G+L H D++ G P
Sbjct: 18 NRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHSE-----DLLLGLKEIMPSN 72
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ ++
Sbjct: 73 TYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQI 132
Query: 134 ISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ L + LV+ F+ V I L Y F IWN Y M+ +
Sbjct: 133 MTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNR----IWNLIRYIIMIGVT 188
Query: 191 IGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ ++ + P+ + + +LPG IF+ I+W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 189 IFILAALYYYTPSKRLRWRDVLPGAIFSTIAWIIASMGFSFYVDNFNNYSRLYGSIGAVI 248
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
LV+LY+ + I G E+NA ++
Sbjct: 249 VFLVWLYLTSIIVITGGEINALLV 272
>gi|163790741|ref|ZP_02185168.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
gi|159874042|gb|EDP68119.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
Length = 313
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 130/262 (49%), Gaps = 6/262 (2%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEV 73
++ + E + W + IS LLS+FP IV N+ + L A + +P + + V P
Sbjct: 29 VQKYREAEVWNSGAIISYYFLLSIFPVIVVIGNVLPYFRLDAAELLPYIENAV----PNY 84
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ D + + G+ +I+ + A + +S G+ A+++S+N+AY V R+ I RL
Sbjct: 85 FFDQVEDVLTSWFTRSSGGILSIAVIGALWSASRGMTAMQVSMNKAYGVEPRRNIVIIRL 144
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
S L V+++++ VF L L Y+ + + R TM+ LFI
Sbjct: 145 FSLILTTLLIVSIMLLVIVFGFGQLILEYITPIIDIPLTISETFQSLRWPVTMIVLFIIF 204
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F+P AK S+LPG F+ I W++ + +F Y+ F+ + Y + + M L+
Sbjct: 205 CLLYYFVPHAKIAFKSVLPGAAFSTIGWMLVSQVFAVYVEYFAIGTKSYGTIGTFMIMLI 264
Query: 254 FLYMLGVFFILGAELNASMIIY 275
+L ++G GA +NA++ +Y
Sbjct: 265 WLQVIGALMTAGAVINAAIDVY 286
>gi|162456942|ref|YP_001619309.1| hypothetical protein sce8659 [Sorangium cellulosum 'So ce 56']
gi|161167524|emb|CAN98829.1| hypothetical protein sce8659 [Sorangium cellulosum 'So ce 56']
Length = 337
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 131/261 (50%), Gaps = 7/261 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D + D + +++ +A+ ++ +L++FPF++F LAG + ++ ++
Sbjct: 12 DFLNDIKQECIKDKIDTIAASLAFFGVLAIFPFLLFAVALAGLVIDPAESAQLMSELYQV 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P +A + + + + + L T+ AL A + +S GV AL +LN AY V + RS+
Sbjct: 72 APPAVANILGERLQALTGGQSPALLTVGALGAVWAASGGVTALMDALNSAYGVEDKRSYL 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R I+ L +V L I S + VA P A++ F L++W R+ + L +
Sbjct: 132 KRRGIALLVTLGGAVLLTIASALAVATPALAAHLGPFA------TLVLWL-RMPVSALIV 184
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ LP + + I PG + + WV+ ++ F+ Y+ F +Y Y L ++
Sbjct: 185 MVVLATLYYLLPDVEQQFKFITPGSVVAVVIWVLASLGFSFYVSRFGSYEVSYGALGGVI 244
Query: 250 TCLVFLYMLGVFFILGAELNA 270
L+++++ + +LGAE+NA
Sbjct: 245 ILLLWMWISSLAVLLGAEINA 265
>gi|229009893|ref|ZP_04167112.1| YihY [Bacillus mycoides DSM 2048]
gi|228751324|gb|EEM01131.1| YihY [Bacillus mycoides DSM 2048]
Length = 289
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 134/271 (49%), Gaps = 16/271 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPE 72
D + + +D +A+ ++ LL++FP +VF L GF+ + V ++++V P+
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQTEDVLSLLEVYV---PD 75
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 76 DAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTR 135
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATML 187
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 136 ALSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFF 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L F++ F P K K ++ G +F I W+V + F +Y+ F+ Y+ Y GL
Sbjct: 191 VLIALFSFLYTFAPDRKLKRREVVSGALFATIGWIVVSYSFAYYVDKFANYANTYGGLGG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
I+ +++ Y+ G +LG E+N +++++R
Sbjct: 251 IIILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|153939153|ref|YP_001392760.1| YihY family protein [Clostridium botulinum F str. Langeland]
gi|152935049|gb|ABS40547.1| YihY family protein [Clostridium botulinum F str. Langeland]
gi|295320739|gb|ADG01117.1| YihY family protein [Clostridium botulinum F str. 230613]
Length = 285
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 133/264 (50%), Gaps = 16/264 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA---WPEV 73
F+E++ A++S ++ + ++SVFPF++F L G+L H D++ G P
Sbjct: 18 NRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHSE-----DLLLGLKEIMPSN 72
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ ++
Sbjct: 73 TYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQI 132
Query: 134 ISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ L + LV+ F+ V I L Y F IWN Y M+ +
Sbjct: 133 MTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNR----IWNLIRYIIMIGVT 188
Query: 191 IGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 189 IFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVI 248
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
LV+LY+ + I G E+NA ++
Sbjct: 249 VFLVWLYLTSIIVITGGEINALLV 272
>gi|168178914|ref|ZP_02613578.1| YihY family protein [Clostridium botulinum NCTC 2916]
gi|182670173|gb|EDT82149.1| YihY family protein [Clostridium botulinum NCTC 2916]
Length = 285
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 133/264 (50%), Gaps = 16/264 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA---WPEV 73
F+E++ A++S ++ + ++SVFPF++F L G+L H D++ G P
Sbjct: 18 NRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHSE-----DLLLGLKEIMPSN 72
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ ++
Sbjct: 73 TYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQI 132
Query: 134 ISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ L + LV+ F+ V I L Y F IWN Y M+ +
Sbjct: 133 MTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNR----IWNLIRYIIMIGVT 188
Query: 191 IGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 189 IFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVI 248
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
LV+LY+ + I G E+NA ++
Sbjct: 249 VFLVWLYLTSIIVITGGEINALLV 272
>gi|168181945|ref|ZP_02616609.1| YihY family protein [Clostridium botulinum Bf]
gi|237796863|ref|YP_002864415.1| YihY family protein [Clostridium botulinum Ba4 str. 657]
gi|182674758|gb|EDT86719.1| YihY family protein [Clostridium botulinum Bf]
gi|229263986|gb|ACQ55019.1| YihY family protein [Clostridium botulinum Ba4 str. 657]
Length = 285
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 133/264 (50%), Gaps = 16/264 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA---WPEV 73
F+E++ A++S ++ + ++SVFPF++F L G+L H D++ G P
Sbjct: 18 NRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHSE-----DLLLGLKEIMPSN 72
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ ++
Sbjct: 73 TYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQI 132
Query: 134 ISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ L + LV+ F+ V I L Y F IWN Y M+ +
Sbjct: 133 MTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNR----IWNLIRYIIMIGVT 188
Query: 191 IGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 189 IFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVI 248
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
LV+LY+ + I G E+NA ++
Sbjct: 249 VFLVWLYLTSIIVITGGEINALLV 272
>gi|296331881|ref|ZP_06874346.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305673493|ref|YP_003865165.1| hypothetical protein BSUW23_04000 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296150959|gb|EFG91843.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305411737|gb|ADM36856.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 275
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 5/198 (2%)
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
Q L GL + +AA + +SNG+ A+ SLN AY V E RS+ I RL S ++ +A
Sbjct: 74 QTLNNRNGGLLSFGIIAALWSASNGMNAIVRSLNHAYEVEENRSFIIVRLTSI-FLTIAM 132
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFVHLFLPA 202
V ++++ + + + F +L L IW R + L L I +++ P
Sbjct: 133 VFTILVALLLPVFGREIGRLASDFVGASDLFLSIWAAIRWGVSPLVLLIVFSALYVIAPN 192
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
K + ++PG +F I W+V + LF+ Y+ TF+ YS Y + I+ +++ Y+ G+
Sbjct: 193 KKLSLRFVMPGAVFATIGWIVVSTLFSFYVSTFANYSATYGSIGGIIVLMIWFYLSGILI 252
Query: 263 ILGAELNASMIIYYWRKK 280
ILG E+NA + + RKK
Sbjct: 253 ILGGEINA---LLHKRKK 267
>gi|310659169|ref|YP_003936890.1| integral inner membrane protein with ribonuclease fold [Clostridium
sticklandii DSM 519]
gi|308825947|emb|CBH21985.1| putative integral inner membrane protein with ribonuclease fold
[Clostridium sticklandii]
Length = 319
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 133/272 (48%), Gaps = 4/272 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I + + F ++ ++ LLSVFPF++F L GFL V ++I +
Sbjct: 19 NLILELPKRFARDNISQTGGQLAYFFLLSVFPFLIFLNALLGFLNIS--VESIIREISAI 76
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE I + + V+ L +I LA+ + +S V++L I+LN AY V R++
Sbjct: 77 APEEIVVLLRGYLESVVETRNTSLLSIGLLASLFSASKAVDSLIIALNTAYDVENKRNFI 136
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW-NGRIYATMLA 188
+ +S + L+ +VI S + A+ +A++ F + N+++ +W R
Sbjct: 137 TKKAVSIFFTLILGFAIVI-SLLLPALGKNVAFLIADFFRISNIIVFVWVYIRWVIVFFI 195
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LFI + ++ +P + LPG F SW++ + F Y+ F+ YS +Y + ++
Sbjct: 196 LFITIALLYHIVPYVNQPFKNSLPGTFFAVTSWLLVSYGFGIYVNNFANYSAVYGSIGAV 255
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ + +LY+ G+ +LG E+N + YY K
Sbjct: 256 IALMFWLYLTGIILVLGGEINDILYRYYEATK 287
>gi|291483230|dbj|BAI84305.1| hypothetical protein BSNT_01322 [Bacillus subtilis subsp. natto
BEST195]
Length = 275
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 58 FVPTVIDVVFG---AWPEVIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALR 113
++P D V G + A + + I Q L GL + +AA + +SNG+ A+
Sbjct: 44 YLPLSTDDVLGVIEQYAPASAMSLVESITHQTLNNRNGGLLSFGIIAALWSASNGMNAIV 103
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
SLN AY V E RS+ I RL S ++ +A V ++++ + + + F +L
Sbjct: 104 RSLNHAYDVEENRSFIIVRLTSI-FLTIAMVFTILVALLLPVFGREIGRLASDFVGASDL 162
Query: 174 LLIIWNG-RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L +W R + L L I +++ P K + ++PG +F I W+V + LF+ Y+
Sbjct: 163 FLSVWAAIRWGVSPLVLLIVFSALYVIAPNKKLSLRFVMPGAVFATIGWIVVSTLFSFYV 222
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
TF+ YS Y + I+ +++ Y+ G+ ILG E+NA + + RKK
Sbjct: 223 STFANYSATYGSIGGIIVLMIWFYLSGILIILGGEINA---LLHKRKK 267
>gi|148381344|ref|YP_001255885.1| YihY family protein [Clostridium botulinum A str. ATCC 3502]
gi|153933068|ref|YP_001385721.1| YihY family protein [Clostridium botulinum A str. ATCC 19397]
gi|153935062|ref|YP_001389128.1| YihY family protein [Clostridium botulinum A str. Hall]
gi|148290828|emb|CAL84963.1| putative membrane-associated ribonuclease [Clostridium botulinum A
str. ATCC 3502]
gi|152929112|gb|ABS34612.1| YihY family protein [Clostridium botulinum A str. ATCC 19397]
gi|152930976|gb|ABS36475.1| YihY family protein [Clostridium botulinum A str. Hall]
Length = 285
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 132/264 (50%), Gaps = 16/264 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG---AWPEV 73
F+E++ A++S ++ + ++SVFPF++F L G+L H D++ G P
Sbjct: 18 NRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHSE-----DLLLGLKEIMPSN 72
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ +
Sbjct: 73 TYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQT 132
Query: 134 ISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ L + LV+ F+ V I L Y F IWN Y M+ +
Sbjct: 133 MTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNR----IWNLIRYIIMIGVT 188
Query: 191 IGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 189 IFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVI 248
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
LV+LY+ + I G E+NA ++
Sbjct: 249 VFLVWLYLTSIIVITGGEINALLV 272
>gi|317495128|ref|ZP_07953498.1| ribonuclease BN family protein [Gemella moribillum M424]
gi|316914550|gb|EFV36026.1| ribonuclease BN family protein [Gemella moribillum M424]
Length = 301
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 135/274 (49%), Gaps = 33/274 (12%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ---------FV 59
+ I+YD I +++++S +LSVFP ++ L + Q F
Sbjct: 30 YRIMYDEIS--------LLSANLSYYFILSVFPMLIVALALTPYFKIDQQFLLAKIQTFA 81
Query: 60 PTVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
P + D +F EV+ + I+ TI + + +SNG+ + I+ N
Sbjct: 82 PGALGDYLFNMISEVLNSKNNNTII-----------TIGVVFTLWSASNGIYGIIIAFNN 130
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTL-VIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
A+RV + R W +T++IS + +L + + ++++ V L KF L +
Sbjct: 131 AFRVRDGRIWIVTKIISIIFTVLFLIGMFLVLALVVFGKQLTYLLFHKF--NLDEGFYTM 188
Query: 178 WNGRIYA-TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
W+ Y+ +L FI +F+++ P K K +SILPG +F+ ISW + + LF +YI FS
Sbjct: 189 WSYLSYSFPILFTFIVFVFLYILGPNLKLKSISILPGAVFSTISWTLVSRLFGYYIDHFS 248
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+Y Y + ++M +++LY+ G I+GAE+NA
Sbjct: 249 SYIKTYGTIGALMAFIIWLYITGYILIIGAEINA 282
>gi|182418163|ref|ZP_02949463.1| YihY family protein [Clostridium butyricum 5521]
gi|237666283|ref|ZP_04526270.1| YihY family protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377981|gb|EDT75521.1| YihY family protein [Clostridium butyricum 5521]
gi|237658373|gb|EEP55926.1| YihY family protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 285
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 132/256 (51%), Gaps = 10/256 (3%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++D +A++S ++ +LS FPF++F L GF +H V+D + P I
Sbjct: 24 KDDVFALSSQLAYYLILSFFPFMIFLITLIGF--SHLSSVEVLDNLNAILPTSIVDLTKS 81
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I +V+ GL +S L + SS+ A+ +N+AY E RS+ +IS ++
Sbjct: 82 IIAEVVDNQHTGLLGVSVLLMIWTSSSAFRAVIKGVNKAYGFKENRSFIKRSIISMIGII 141
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV---- 196
L +V +++ + V + AY+ P +++ +WN YA +FI +IF+
Sbjct: 142 LLAVIILLALAMLVFGNVIGAYIISRIP-FYKIIIFLWNMFRYAF---VFIVMIFIFALM 197
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
++F PA + K+ ++PG +F+ + W+ + F+ YI F YS Y L ++ + +L+
Sbjct: 198 YMFAPAKRLKLKEVVPGSVFSTMGWIAVSFGFSFYINNFGNYSRFYGSLGAVFILMTWLF 257
Query: 257 MLGVFFILGAELNASM 272
++ + FILG E+N M
Sbjct: 258 LISMIFILGVEINCVM 273
>gi|16077857|ref|NP_388671.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308625|ref|ZP_03590472.1| hypothetical protein Bsubs1_04393 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312949|ref|ZP_03594754.1| hypothetical protein BsubsN3_04344 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317874|ref|ZP_03599168.1| hypothetical protein BsubsJ_04293 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322147|ref|ZP_03603441.1| hypothetical protein BsubsS_04389 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321314517|ref|YP_004206804.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
gi|81342316|sp|O34437|YFKH_BACSU RecName: Full=Putative ribonuclease-like protein yfkH
gi|2626820|dbj|BAA23398.1| YfkH [Bacillus subtilis]
gi|2633114|emb|CAB12619.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. subtilis str. 168]
gi|320020791|gb|ADV95777.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis BSn5]
Length = 275
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 58 FVPTVIDVVFG---AWPEVIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALR 113
++P D V G + A + + I Q L GL + +AA + +SNG+ A+
Sbjct: 44 YLPLSTDDVLGVIEQYAPASAMSLVESITHQTLNNRNGGLLSFGIIAALWSASNGMNAIV 103
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
SLN AY V E RS+ I RL S ++ +A V ++++ + + + F +L
Sbjct: 104 RSLNHAYDVEENRSFIIVRLTSI-FLTIAMVFTILVALLLPVFGREIGRLASDFVGASDL 162
Query: 174 LLIIWNG-RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L +W R + L L I +++ P K + ++PG +F I W++ + LF+ Y+
Sbjct: 163 FLSVWAAIRWGVSPLVLLIVFSALYVIAPNKKLSLRFVMPGAVFATIGWIIVSTLFSFYV 222
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
TF+ YS Y + I+ +++ Y+ G+ ILG E+NA + + RKK
Sbjct: 223 STFANYSATYGSIGGIIVLMIWFYLSGILIILGGEINA---LLHKRKK 267
>gi|304439597|ref|ZP_07399501.1| possible ribonuclease BN [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371909|gb|EFM25511.1| possible ribonuclease BN [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 308
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 27/265 (10%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVFGAWPEVIAKP 77
+++ AMA ++ +LS+FPFI+ N+ F+ +FV + PE I
Sbjct: 29 DKNLPAMAGSLTFFTILSIFPFIIAFLNIISFVEVFNQSEFVN-----LMTMLPEEIYSI 83
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
I + I Q+ + GL ++S + + +S+GV+ L I++N AY + + R++++ RLI+
Sbjct: 84 IAEFISQMNKASSTGLLSVSLILGIFSASSGVKQLIININYAYGIKDNRNYFLRRLIAAV 143
Query: 138 YVLLASVTLVIMSFVFV----AIPLALAYVR-------KFFPALGNLLLIIWNGRIYATM 186
+ LL V ++++S V AI A+ +++ F AL NL+ I A M
Sbjct: 144 FTLLLMVMIILISITSVVGEMAITKAILFLQIDASNFYNVFKALRNLVPI-------AYM 196
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L +FI + + L ++ KI +LPG IFT I + + LF Y+ F+ YS Y L
Sbjct: 197 LIIFIVMYYFTLNKNIRRNIKITEVLPGAIFTTIGQNLFSALFGVYLQNFAKYSVTYGSL 256
Query: 246 ASIMTCLVFLYMLGVFFILGAELNA 270
SI L + Y + ++G+E+N
Sbjct: 257 GSIFAFLTWSYFMSYTMLIGSEING 281
>gi|331268878|ref|YP_004395370.1| ribonuclease BN [Clostridium botulinum BKT015925]
gi|329125428|gb|AEB75373.1| ribonuclease BN, putative [Clostridium botulinum BKT015925]
Length = 271
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 141/270 (52%), Gaps = 24/270 (8%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGA 69
I+ + + +++ +A+AS ++ S LLS FPF++F + + + + + + T+ +++
Sbjct: 10 IFQLLYNLKKDEIFALASQLAYSLLLSFFPFLIFLFTITSYSTIQSDRVLFTLKNII--- 66
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + I +VL L + S + + +SNG +A+ +LN+AY E RS+
Sbjct: 67 -PESAYTLVYSIINEVLESKNVNLLSFSFIITIWIASNGFKAVIRALNKAYGEKEERSFI 125
Query: 130 ITRLISFGYVLLASVTLVIMSF--VFVAIPLALA-----YVRKFFPALGNLLLIIWNGRI 182
+L +A +T +I++F +F L L + KFF NL + WN
Sbjct: 126 KLQL-------MAIITTIILTFLIIFSLFLLVLGNIIGYKIMKFFSLPDNLFFV-WNVFR 177
Query: 183 YATMLALFIGLIF--VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
Y ML +F+ LIF ++ P K +LPG IF I W++ ++ F+ Y+ F+ YS
Sbjct: 178 YFLML-IFMILIFAVIYKLTPCRKLTFGEVLPGSIFATIGWIIVSLGFSFYVDNFANYSR 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+Y + +++ +V+L++ + ++G E+NA
Sbjct: 237 LYGSIGAVIILMVWLFLTSIIILIGGEINA 266
>gi|157691522|ref|YP_001485984.1| hypothetical protein BPUM_0738 [Bacillus pumilus SAFR-032]
gi|157680280|gb|ABV61424.1| hypothetical protein BPUM_0738 [Bacillus pumilus SAFR-032]
Length = 272
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 127/256 (49%), Gaps = 4/256 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
IE F+ +G A ++ ++ LLS+FPF++F L G+L V+ V+ G PE
Sbjct: 8 IERFLLHEGPAKSAELAYFFLLSLFPFLIFVLTLVGYLPLTS--KDVLSVISGYAPEGAL 65
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I Q L GL + +AA + +SNG+ A+ + N AY V E RS+ + RL S
Sbjct: 66 SMIESIAEQTLNNRNGGLLSFGIIAALWSASNGINAVVRAFNHAYEVEENRSFILVRLTS 125
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLI 194
+ +A V +I + + L + L IW R + L L I
Sbjct: 126 I-ILTIAMVLTIIFALMLPVFGKELGLFVAKLVGQSDAFLTIWTAMRWIISPLILLIVFT 184
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F P + K+ +LPG IF I W++ ++LF+ Y+ F+ YS MY + I+ +++
Sbjct: 185 SLYYFAPNMRLKLKFVLPGAIFASIGWILVSMLFSFYVGEFANYSAMYGSIGGIIILMIW 244
Query: 255 LYMLGVFFILGAELNA 270
Y+ G+ ILG ELNA
Sbjct: 245 FYLTGIMIILGGELNA 260
>gi|319892923|ref|YP_004149798.1| Ribonuclease BN [Staphylococcus pseudintermedius HKU10-03]
gi|317162619|gb|ADV06162.1| Ribonuclease BN [Staphylococcus pseudintermedius HKU10-03]
Length = 445
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 133/270 (49%), Gaps = 27/270 (10%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++D +A+ ++ +LS+FP ++F +L T+ + P + IT
Sbjct: 96 KDDASGLAAQLAYYFMLSLFPMLIFILSLVPLFNIDS--DTITAQISKNAPAETSSIITG 153
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I V+ + GL +I + A + +SNG+ A+ + N AY V + R++ +++L++ + L
Sbjct: 154 IIDDVMGNASGGLLSIGLILALWTASNGMTAMMNAFNVAYDVEDSRNFVVSKLLAIFFTL 213
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--------IIWNGRIYAT---MLAL 189
L +TL + +F F +GNLL + W + T +LA+
Sbjct: 214 LIGITLPLTLVLFT-----------FGEQIGNLLFGPLGLDEQVRWVFSLLRTALPVLAV 262
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ P K + S++PG +F+ I W++G++ F Y+ F+ YS Y + ++
Sbjct: 263 LIVFTIIYTLAPNVKIRFKSVIPGALFSTIVWILGSLAFGFYVSNFANYSKTYGSIGGVI 322
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++LY+ G I+GAE+NA I + RK
Sbjct: 323 VLMLWLYITGFILIIGAEINA---IVHQRK 349
>gi|323464029|gb|ADX76182.1| ribonuclease BN-like family protein [Staphylococcus
pseudintermedius ED99]
Length = 445
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 133/270 (49%), Gaps = 27/270 (10%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++D +A+ ++ +LS+FP ++F +L T+ + P + IT
Sbjct: 96 KDDASGLAAQLAYYFMLSLFPMLIFILSLVPLFNIDS--DTITAQISKNAPAETSSIITG 153
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I V+ + GL +I + A + +SNG+ A+ + N AY V + R++ +++L++ + L
Sbjct: 154 IIDDVMGNASGGLLSIGLILALWTASNGMTAMMNAFNVAYDVEDSRNFVVSKLLAIFFTL 213
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--------IIWNGRIYAT---MLAL 189
L +TL + +F F +GNLL + W + T +LA+
Sbjct: 214 LIGITLPLTLVLFT-----------FGEQIGNLLFGPLGLDEQVRWVFSLLRTALPVLAV 262
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ P K + S++PG +F+ I W++G++ F Y+ F+ YS Y + ++
Sbjct: 263 LIVFTIIYTLAPNVKIRFKSVIPGALFSTIVWILGSLAFGFYVSNFANYSKTYGSIGGVI 322
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++LY+ G I+GAE+NA I + RK
Sbjct: 323 VLMLWLYITGFILIIGAEINA---IVHQRK 349
>gi|255003094|ref|ZP_05278058.1| hypothetical protein AmarPR_02223 [Anaplasma marginale str. Puerto
Rico]
Length = 291
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQ-FVPTVIDVVFGA 69
AI F DG + +++ LL+ FPF+VF + L H+ F+ ++ +
Sbjct: 36 AIADFRRHDGLVYSGYLAFIFLLATFPFLVFFTAMTSTALNVLDKHEDFLQGLVTSLLSE 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV +
Sbjct: 96 LPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRVSAPPPYI 155
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++S L+ + ++ V +P+ L + + + LG + + +L L
Sbjct: 156 LGRMLSILQFLVIVLVMMFSVLFIVFVPIVLDVLDQKWGYLGYI-----KYTLSEVILCL 210
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L++ +P + +I ILPG + I W + F+ Y+ F TMY L+ I+
Sbjct: 211 SVALLY--FMVPNTRQRIGVILPGAVVVTILWTASSFTFSWYLSNFRVLHTMYGNLSGII 268
Query: 250 TCLVFLYMLGVFFILGA-ELNA 270
++F Y+L +FFI GA EL A
Sbjct: 269 ASMLFFYILSIFFIYGAVELPA 290
>gi|329767146|ref|ZP_08258674.1| hypothetical protein HMPREF0428_00371 [Gemella haemolysans M341]
gi|328837871|gb|EGF87496.1| hypothetical protein HMPREF0428_00371 [Gemella haemolysans M341]
Length = 300
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+++++S +LS+FP ++ L + Q +++ + P + + D I +VL
Sbjct: 40 LSANLSYYFILSLFPMLIVALALTPYFKIDQ--QFLLERIQNFAPGDLGNYLFDMISEVL 97
Query: 87 AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
+ T+ + + +S+G+ + I+ N A+RV + R W +T+LIS L V +
Sbjct: 98 NNKNNTIITVGIVFTLWSASSGIYGIIIAFNNAFRVRDGRIWIVTKLISVVITALFLVGM 157
Query: 147 -VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA-TMLALFIGLIFVHLFLPAAK 204
V+++ V L KF L +W+ Y+ +L FI +F+++ P K
Sbjct: 158 FVVLALVVFGKQLTYLLFHKF--NLDEGFYNLWSVLNYSFPILFTFIVFVFLYIMGPNLK 215
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
K +SILPG IF +SW + + LF +YI FS+Y Y + + M +++LY+ G I+
Sbjct: 216 LKAISILPGSIFATVSWTLISRLFGYYIDHFSSYIKTYGTIGAFMAFIIWLYITGYILII 275
Query: 265 GAELNA 270
GAE+NA
Sbjct: 276 GAEINA 281
>gi|81429127|ref|YP_396128.1| putative ribonuclease [Lactobacillus sakei subsp. sakei 23K]
gi|78610770|emb|CAI55821.1| Putative ribonuclease [Lactobacillus sakei subsp. sakei 23K]
Length = 312
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 123/245 (50%), Gaps = 2/245 (0%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
A I+ ALLS FP ++ N+ + V +V D V A P I I + +L
Sbjct: 42 AKIIAYYALLSFFPLLIVIGNILPYFQLD--VLSVADYVKSAVPPTIFNRIMPILQSLLN 99
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
GL ++ L + +S G+ AL+IS+NRAYRV ++ ++ + RLIS G L+ + LV
Sbjct: 100 KRNSGLLSVGILGTLWAASKGINALKISINRAYRVDKIHNFILKRLISLGTTLVLLLLLV 159
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
+ VF L ++ F + + + + T + LF+ LIFV+ F+P K ++
Sbjct: 160 SLIVVFTFGQQFLEFITPIFKIPEDYINVFGQLKWPITSIVLFVILIFVYFFVPNVKMQL 219
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG T + W++ A F+ Y+ F T Y + + + L++L + + GA
Sbjct: 220 RSVLPGAFLTTVGWLILAQAFSLYMRYFGTSWNSYGTIGAFIILLLWLNYSAMVLMFGAV 279
Query: 268 LNASM 272
+N ++
Sbjct: 280 VNVAI 284
>gi|57867339|ref|YP_188990.1| ribonuclease BN [Staphylococcus epidermidis RP62A]
gi|251809911|ref|ZP_04824384.1| ribonuclease BN [Staphylococcus epidermidis BCM-HMP0060]
gi|282874567|ref|ZP_06283452.1| YihY family protein [Staphylococcus epidermidis SK135]
gi|293367803|ref|ZP_06614452.1| YihY family protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|57637997|gb|AAW54785.1| ribonuclease BN, putative [Staphylococcus epidermidis RP62A]
gi|251806576|gb|EES59233.1| ribonuclease BN [Staphylococcus epidermidis BCM-HMP0060]
gi|281296706|gb|EFA89215.1| YihY family protein [Staphylococcus epidermidis SK135]
gi|291318142|gb|EFE58539.1| YihY family protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|329726921|gb|EGG63379.1| YihY family protein [Staphylococcus epidermidis VCU144]
gi|329734775|gb|EGG71081.1| YihY family protein [Staphylococcus epidermidis VCU045]
gi|329734799|gb|EGG71104.1| YihY family protein [Staphylococcus epidermidis VCU028]
Length = 392
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 138/267 (51%), Gaps = 19/267 (7%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAG---FLGAHQFVPTVIDVVFGAWPEVIAKP 77
++D +A+ ++ +L++FP ++F L G + A+Q V V P+
Sbjct: 77 KDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQFITIDANQINQKVSQYV----PDQETAS 132
Query: 78 ITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I++ ++ A G + ++ + A + +SNG+ A+ S N AY V + R+ + +L+S
Sbjct: 133 IVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNGVVVKLLSI 192
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWN-GRIYATMLALFIG 192
Y L+ V+ + P+ + KF F LG N + I+N RI ++ +FI
Sbjct: 193 LYTLVLGAVFVVAVVLITLGPV----INKFLFGPLGIDNQIEWIFNLVRIVIPLIIIFII 248
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I+
Sbjct: 249 FTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGIIILF 308
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
++LY+ I+GAE+NA I + RK
Sbjct: 309 LWLYITSFIIIIGAEINA---IIHQRK 332
>gi|27468486|ref|NP_765123.1| transporter [Staphylococcus epidermidis ATCC 12228]
gi|27316033|gb|AAO05167.1|AE016749_113 transporter [Staphylococcus epidermidis ATCC 12228]
Length = 392
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 138/267 (51%), Gaps = 19/267 (7%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAG---FLGAHQFVPTVIDVVFGAWPEVIAKP 77
++D +A+ ++ +L++FP ++F L G + A+Q V V P+
Sbjct: 77 KDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQFITIDANQINQKVSQYV----PDQETAS 132
Query: 78 ITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I++ ++ A G + ++ + A + +SNG+ A+ S N AY V + R+ + +L+S
Sbjct: 133 IVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNGVVVKLLSI 192
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWN-GRIYATMLALFIG 192
Y L+ V+ + P+ + KF F LG N + I+N RI ++ +FI
Sbjct: 193 LYTLVLGAVFVVAVVLITLGPV----INKFLFGPLGIDNQIEWIFNLVRIVIPLIIIFII 248
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I+
Sbjct: 249 FTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGIIILF 308
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
++LY+ I+GAE+NA I + RK
Sbjct: 309 LWLYITSFIIIIGAEINA---IIHQRK 332
>gi|328957860|ref|YP_004375246.1| putative ribonuclease [Carnobacterium sp. 17-4]
gi|328674184|gb|AEB30230.1| putative ribonuclease [Carnobacterium sp. 17-4]
Length = 319
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 133/264 (50%), Gaps = 10/264 (3%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPEV 73
I+ + E + W + IS LLS+FP +V +N+ +L A + +P + + V P
Sbjct: 29 IQKYREAEVWNSGAIISYYLLLSIFPVMVVVSNVLPYLRLDAAELLPYIENAV----PTY 84
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + ++ + + G+ +I+ + A + SS G+ A+++S+N+AY V R+ I RL
Sbjct: 85 FFHQLENLLMNWFSKSSGGILSIAVIGALWSSSRGMNAMQVSMNKAYGVEPRRNIVIIRL 144
Query: 134 ISFGYVLLASVTLVIMSFV--FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
F +L S+ L IM V F L L Y+ F + + R T+ LFI
Sbjct: 145 --FSLILTTSLILCIMVLVIIFGFGQLILEYITPVFELPLMISETFQSLRWPVTVSVLFI 202
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ F+P AK + S+LPG + I W++ + +F Y+ F+ + Y + + M
Sbjct: 203 IFCVLYYFVPHAKVTLKSVLPGAAISTIGWMLVSQVFAIYVEYFAFGAKTYGTIGTFMIM 262
Query: 252 LVFLYMLGVFFILGAELNASMIIY 275
L++L ++G GA +NAS+ +Y
Sbjct: 263 LIWLQVIGSLMTAGAVINASIEVY 286
>gi|325571347|ref|ZP_08146847.1| YihY family protein [Enterococcus casseliflavus ATCC 12755]
gi|325155823|gb|EGC68019.1| YihY family protein [Enterococcus casseliflavus ATCC 12755]
Length = 307
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 121/235 (51%), Gaps = 2/235 (0%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS+FP ++ NL +L TV+ V P I I I +L + GL +
Sbjct: 41 LLSLFPLMIALGNLLPYLSIDP--NTVLSYVQELIPNQIYDFIGPAIENLLTTSSGGLLS 98
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
ISALAA + +S + AL+I++N+A+ V + ++ + R +SF +LL + +V ++ VF
Sbjct: 99 ISALAALWSASQSINALQIAMNKAFGVDQRSNFIVVRAVSFVIILLFMIAIVGVTMVFGL 158
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ L +++ F NL+ + T++AL ++ ++ +P AK K+ S LPG I
Sbjct: 159 GKIILDFLQPIFKFQDNLIDTFQTVKWPVTIVALLFIMMLIYWLVPNAKVKLRSTLPGAI 218
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F I W++ + +F Y F+ Y + S + +++L + ILG +NA
Sbjct: 219 FATIGWMLLSQVFGLYARYFAAKIIGYQIIGSFIVLMIWLNLAATIIILGGIINA 273
>gi|319399849|gb|EFV88096.1| YihY family protein [Staphylococcus epidermidis FRI909]
Length = 392
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 138/267 (51%), Gaps = 19/267 (7%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAG---FLGAHQFVPTVIDVVFGAWPEVIAKP 77
++D +A+ ++ +L++FP ++F L G + A+Q V V P+
Sbjct: 77 KDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQFITIDANQINQKVSQYV----PDQETAS 132
Query: 78 ITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I++ ++ A G + ++ + A + +SNG+ A+ S N AY V + R+ + +L+S
Sbjct: 133 IVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNGIVVKLLSI 192
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWN-GRIYATMLALFIG 192
Y L+ V+ + P+ + KF F LG N + I+N RI ++ +FI
Sbjct: 193 LYTLVLGAVFVVAVVLITLGPV----INKFLFGPLGIDNQIEWIFNLVRIVIPLIIIFII 248
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I+
Sbjct: 249 FTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGIIILF 308
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
++LY+ I+GAE+NA I + RK
Sbjct: 309 LWLYITSFIIIIGAEINA---IIHQRK 332
>gi|212638170|ref|YP_002314690.1| ribonuclease BN-like family enzyme [Anoxybacillus flavithermus WK1]
gi|212559650|gb|ACJ32705.1| Ribonuclease BN-like family enzyme [Anoxybacillus flavithermus WK1]
Length = 277
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P A I + Q++ + + S LA + +SNG+ A+ +LNRAY V E RS+++
Sbjct: 65 PSETAHLIETNVKQLMESQSGKWLSFSVLATVWAASNGMSAIIRALNRAYDVKETRSFFV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWNG-RIYATM 186
R +S + A + ++I++ +F P+ + F F A G ++ L +W R + +
Sbjct: 125 ARGVSI-LLTFAMIFVIIVALIF---PVFGKMIGTFLFSAFGLSDVFLHVWETIRWFVSF 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ LF +++F P+ + + G +F + W++ ++ F+ Y+ F YS MY L
Sbjct: 181 VILFFVFSVLYVFAPSKYVRFRDVWSGALFATVGWMIVSLAFSSYVNQFGNYSAMYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
I+ +V+ Y+ G+ +LG ELNA
Sbjct: 241 GIIALMVWFYLSGMMIVLGGELNA 264
>gi|242241721|ref|ZP_04796166.1| ribonuclease BN [Staphylococcus epidermidis W23144]
gi|242234811|gb|EES37122.1| ribonuclease BN [Staphylococcus epidermidis W23144]
Length = 392
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 138/267 (51%), Gaps = 19/267 (7%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAG---FLGAHQFVPTVIDVVFGAWPEVIAKP 77
++D +A+ ++ +L++FP ++F L G + A+Q V V P+
Sbjct: 77 KDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQFITIDANQINQKVSQYV----PDQETAS 132
Query: 78 ITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I++ ++ A G + ++ + A + +SNG+ A+ S N AY V + R+ + +L+S
Sbjct: 133 IVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNGIVVKLLSI 192
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWN-GRIYATMLALFIG 192
Y L+ V+ + P+ + KF F LG N + I+N RI ++ +FI
Sbjct: 193 LYTLVLGAVFVVAVVLITLGPV----INKFLFGPLGIDNQIEWIFNLVRIVIPLIIIFII 248
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I+
Sbjct: 249 FTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGIIILF 308
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
++LY+ I+GAE+NA I + RK
Sbjct: 309 LWLYITSFIIIIGAEINA---IIHQRK 332
>gi|257867525|ref|ZP_05647178.1| ribonuclease BN [Enterococcus casseliflavus EC30]
gi|257873854|ref|ZP_05653507.1| ribonuclease BN [Enterococcus casseliflavus EC10]
gi|257877604|ref|ZP_05657257.1| ribonuclease BN [Enterococcus casseliflavus EC20]
gi|257801581|gb|EEV30511.1| ribonuclease BN [Enterococcus casseliflavus EC30]
gi|257808018|gb|EEV36840.1| ribonuclease BN [Enterococcus casseliflavus EC10]
gi|257811770|gb|EEV40590.1| ribonuclease BN [Enterococcus casseliflavus EC20]
Length = 307
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 121/235 (51%), Gaps = 2/235 (0%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS+FP ++ NL +L TV+ V P I I I +L + GL +
Sbjct: 41 LLSLFPLMIALGNLLPYLSIDP--NTVLSYVQELIPSQIYDFIGPAIENLLTTSSGGLLS 98
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
ISALAA + +S + AL+I++N+A+ V + ++ + R +SF +LL + +V ++ VF
Sbjct: 99 ISALAALWSASQSINALQIAMNKAFGVDQRSNFIVVRAVSFVIILLFMIAIVGVTMVFGL 158
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ L +++ F NL+ + T++AL ++ ++ +P AK K+ S LPG I
Sbjct: 159 GKIILDFLQPIFKFQDNLIDTFQTVKWPVTIVALLFIMMLIYWLVPNAKVKLRSTLPGAI 218
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F I W++ + +F Y F+ Y + S + +++L + ILG +NA
Sbjct: 219 FATIGWMLLSQVFGLYARYFAAKIIGYQIIGSFIVLMIWLNLAATIIILGGIINA 273
>gi|323486654|ref|ZP_08091975.1| YihY family protein [Clostridium symbiosum WAL-14163]
gi|323692200|ref|ZP_08106443.1| ribonuclease BN [Clostridium symbiosum WAL-14673]
gi|323400035|gb|EGA92412.1| YihY family protein [Clostridium symbiosum WAL-14163]
gi|323503774|gb|EGB19593.1| ribonuclease BN [Clostridium symbiosum WAL-14673]
Length = 273
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 142/288 (49%), Gaps = 27/288 (9%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
YF + IYD FV+++ A+ S +LS FPFI+ L Q VPT+
Sbjct: 3 YFILQCKKIYD---EFVKDEITVYAAQASFFIVLSFFPFIMI------LLTVIQLVPTIS 53
Query: 64 D-----VVFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLN 117
V+ +PE + P+ + I+ L A + +++ + + +S G+ + LN
Sbjct: 54 QADLLLVISRLFPEKVY-PLVESIVTDLYTTAPAAILSVTTIVTIWSASRGMMGIERGLN 112
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR-KFFPALGNL--- 173
R + R++ I+RLI+ GY ++ + + IMS V + +L + ++ P L ++
Sbjct: 113 RIINCSKRRNYVISRLINSGYTVVF-ILVCIMSLVLMVFGTSLQRLLLRYLPILEHIAPY 171
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
LL I A ++ F+GL + FLP K ++ LPG +F+ W+V + F+ Y
Sbjct: 172 LLSIRALIALAILIVFFMGL---YTFLPFEKLELRKQLPGALFSTAGWIVCSYGFSIYFN 228
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
F +S MY LA+I+ +++LY LGAE+N M ++ +KP
Sbjct: 229 HFKRFSYMYGSLAAIVILMLWLYFCICILFLGAEVNQHM---HFGRKP 273
>gi|23097645|ref|NP_691111.1| hypothetical protein OB0190 [Oceanobacillus iheyensis HTE831]
gi|22775868|dbj|BAC12146.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 282
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 134/275 (48%), Gaps = 27/275 (9%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-----AHQFVPTVIDVVFGAW 70
I F +D +A+ ++ LLSVFP +V + + A QF+ +++
Sbjct: 11 ITKFKNDDVPLLAASLAYYFLLSVFPLLVVAFAIIPYFNISPQDAIQFISSIL------- 63
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE +A + I+ ++ P GL TI L + +SNG+ A N +Y V E RS+
Sbjct: 64 PEQLASTFQENIVSIVETPRGGLLTIGILGTLWSASNGINAFIKVSNESYEVEETRSFIK 123
Query: 131 TRLISFG------YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
TR I+FG + ++ ++ L + V + + +++ + + + I+ R
Sbjct: 124 TRAIAFGLTIAMIFAVITAIILPVFGDVILTMAMSIVGINE------STEWILQISRFAI 177
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + L+ ++ F P AK + I+PG + I W++ + F+ Y+ F YS MY
Sbjct: 178 SIAVITLLLLTLYRFAPNAKLPVKHIIPGTLTASILWLIISFGFSIYVSNFGNYSNMYGS 237
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++ +++ ++ G+ ++G +N ++Y+ +K
Sbjct: 238 LGGVIILMIWFFLTGMILLIGGIIN---VMYHQKK 269
>gi|15597947|ref|NP_251441.1| hypothetical protein PA2751 [Pseudomonas aeruginosa PAO1]
gi|107102287|ref|ZP_01366205.1| hypothetical protein PaerPA_01003345 [Pseudomonas aeruginosa PACS2]
gi|116050744|ref|YP_790435.1| hypothetical protein PA14_28530 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218891066|ref|YP_002439932.1| hypothetical protein PLES_23291 [Pseudomonas aeruginosa LESB58]
gi|254241206|ref|ZP_04934528.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296388780|ref|ZP_06878255.1| hypothetical protein PaerPAb_11543 [Pseudomonas aeruginosa PAb1]
gi|313107873|ref|ZP_07794045.1| putative membrane protein [Pseudomonas aeruginosa 39016]
gi|9948830|gb|AAG06139.1|AE004703_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115585965|gb|ABJ11980.1| putative membrane protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126194584|gb|EAZ58647.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218771291|emb|CAW27056.1| putative membrane protein [Pseudomonas aeruginosa LESB58]
gi|310880547|gb|EFQ39141.1| putative membrane protein [Pseudomonas aeruginosa 39016]
Length = 299
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-------- 59
+F ++ + F+E+D AS ++ L S+FPF++ L G+L +F
Sbjct: 11 LFGLVKRTVNEFLEDDMPTYASALAYQMLFSLFPFLLVLITLVGYLHLPEFFAWLREQAA 70
Query: 60 ----PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
P +D V P+ D++ Q GL +I A + SS G+ ++ I+
Sbjct: 71 LLLPPEAMDQV---------NPVIDQLQQ----QKGGLLSIGIAVALWTSSAGIRSMMIA 117
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
LN AY V E R + +S Y L ++ L++ + + V P +A++ L L+
Sbjct: 118 LNAAYDVKESRPVWKRFSLSILYTLGIALLLLVAAGLMVTGPQVIAWIAGLV-GLEQYLV 176
Query: 176 IIWNGRIYATMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+W + LA+F+ ++ V LF +P + + I PG + + I+W+ ++ + Y+
Sbjct: 177 TLWTWLRWP--LAVFLLMLAVALFYYLVPDVEQRFRFITPGSVLSVIAWIAASLAYGFYV 234
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F+ Y+ MY + +I+ L++ Y+ + GAELNA
Sbjct: 235 KNFANYNAMYGSIGAIIILLLYFYLSAAVVLFGAELNA 272
>gi|118444295|ref|YP_877597.1| ribonuclease BN [Clostridium novyi NT]
gi|118134751|gb|ABK61795.1| ribonuclease BN, putative [Clostridium novyi NT]
Length = 271
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 139/282 (49%), Gaps = 44/282 (15%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVF 67
++I+ + +++ +A+AS ++ S LLS FPF++F +A F L + + T+ V+
Sbjct: 8 NLIFKLLYKLKKDEIFALASQLAYSLLLSFFPFLIFLFTVASFSSLKSEGIIITLKSVI- 66
Query: 68 GAWPE---VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
PE + I +E + V L + S + + +SNG +A+ +LN+AY E
Sbjct: 67 ---PESAYTLVHSILNETFEASNV---NLLSFSFIITIWIASNGFKAVIRALNKAYGQEE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL----------- 173
RS+ F + ++ +I++F+ + F LGN+
Sbjct: 121 ERSF-------FKIQFMGIISTIILTFLII--------FSLFILVLGNIIGLKIITMLSL 165
Query: 174 ---LLIIWNGRIYATMLALFIGLIF--VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L IWN Y ML +F+ +IF V+ P K K ++PG IF I W+V ++ F
Sbjct: 166 SINLYFIWNVLRYFVML-IFMIVIFAIVYKITPCRKLKFKDVIPGAIFATIGWIVVSLGF 224
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ Y+ F+ YS +Y + +++ LV+L++ + ++G E+NA
Sbjct: 225 SFYVDNFANYSRLYGSIGAVIVILVWLFLSSIIILIGGEINA 266
>gi|15893776|ref|NP_347125.1| tRNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|15023345|gb|AAK78465.1|AE007563_5 TRNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|325507899|gb|ADZ19535.1| TRNA-processing ribonuclease BN [Clostridium acetobutylicum EA
2018]
Length = 283
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 136/276 (49%), Gaps = 24/276 (8%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+ +++ A++S ++ S + + FPF++F L GF V++ + P +
Sbjct: 16 IKRLIDDGIIALSSQLAYSLIFAFFPFLIFLMTLVGFSSIKS--SDVLEAMRKVVPYQVY 73
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + + +V+ L ++S + + + +G A+ LN +Y+ E RS+ +LIS
Sbjct: 74 GLVKNIVKEVVDTKNGKLLSVSLITSIWSCVSGFNAVIRGLNNSYKDNERRSFLKVQLIS 133
Query: 136 --FGYVLLASVTLVIMSFVFVAIPLALAYVRKF----FPALGNLLLIIWNGRIYATMLAL 189
F + L+ ++ ++ VF I L ++KF F G +W+ Y L
Sbjct: 134 IIFTFGLIITIFFAMLLIVFGDINEELI-IKKFGINEFFGYG-----VWDLIKYGI---L 184
Query: 190 FIGLIF----VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
IG+IF ++ + PA K K + PG + + + WV+ ++ FT+Y+ F YS +Y +
Sbjct: 185 TIGMIFSFAALYRYTPANKHKWKMVFPGAVISALGWVISSICFTYYVNNFGNYSKVYGSI 244
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+++ + +L+++ I G E+NA +Y+ K P
Sbjct: 245 GAVIVLMTWLFIISFIIICGGEINA---VYFEIKNP 277
>gi|152983785|ref|YP_001347855.1| hypothetical protein PSPA7_2488 [Pseudomonas aeruginosa PA7]
gi|150958943|gb|ABR80968.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
Length = 299
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-------- 59
+F ++ + F+E+D AS ++ L S+FPF++ L G+L +F
Sbjct: 11 LFGLVKRTVNEFLEDDMPTYASALAYQMLFSLFPFLLVLITLVGYLHLPEFFAWLREQAA 70
Query: 60 ----PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
P +D V P+ D++ Q GL +I A + SS G+ ++ I+
Sbjct: 71 LLLPPEAMDQV---------NPVIDQLQQ----QKGGLLSIGIAVALWTSSAGIRSMMIA 117
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
LN AY V E R + +S Y L ++ L++ + + V P +A++ L L+
Sbjct: 118 LNAAYDVKESRPVWKRFSLSILYTLGIALLLLVAAGLMVTGPQVIAWIASLV-GLEQYLV 176
Query: 176 IIWNGRIYATMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+W + LA+F+ ++ V LF +P + + I PG + + I+W+ ++ + Y+
Sbjct: 177 TLWTWLRWP--LAVFLLMLAVALFYYLVPDVEQRFRFITPGSVLSVIAWIGASLAYGFYV 234
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F+ Y+ MY + +I+ L++ Y+ + GAELNA
Sbjct: 235 KNFANYNAMYGSIGAIIILLLYFYLSAAVVLFGAELNA 272
>gi|87198076|ref|YP_495333.1| ribonuclease BN [Novosphingobium aromaticivorans DSM 12444]
gi|87133757|gb|ABD24499.1| ribonuclease BN [Novosphingobium aromaticivorans DSM 12444]
Length = 344
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 3/253 (1%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG A +++ ++++FPF + GA L F G ID V A P V+A I
Sbjct: 61 NDGSIHAGNLAYMIIIALFPFFITGAALFSFFGEASQRAAAIDTVLIAMPPVVAATIEPA 120
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
V+ L + + + + VE +R L RAY + + RL+S G + L
Sbjct: 121 ARSVIEARTGWLLWVGGIFGLWTVGSLVETIRDILRRAYGTRWEHALWRYRLMSTG-ITL 179
Query: 142 ASVTLVIMS-FVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYATMLALFIGLIFVHLF 199
ASV L++++ F V I A + F P G+L+ + R + A +L + L+F+ L
Sbjct: 180 ASVVLILLAIFAQVLIGAAQEVIEAFLPQFGDLVASLSLSRFVPAFVLYAALWLLFISLT 239
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
A + + PG +F I W+ + + TF +Y Y LA IM L F +++G
Sbjct: 240 PGAYRGRDYPKWPGALFVTIWWIAVTTVLPGMLRTFFSYDLTYGSLAGIMIALFFFWLVG 299
Query: 260 VFFILGAELNASM 272
+ ++GAELNA++
Sbjct: 300 LGMVVGAELNAAL 312
>gi|225677100|ref|ZP_03788102.1| ribonuclease, BN family [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590859|gb|EEH12084.1| ribonuclease, BN family [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 271
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV----FGANLAGFLGAH 56
+++++ IV+ +Y A+ + DG A ++S LLS+FPF++ + A FL +
Sbjct: 2 LQKFYSIVY-CLYRALIDTIHNDGVEHAGYLSFLILLSIFPFLIVLMAVASTFANFLDQY 60
Query: 57 QFVPTVIDVVF--GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
I VF P+ I + I ++++ P + L T++ + A + +S+ +E LR
Sbjct: 61 N-----IGWVFIIDNMPQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRT 115
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
LN+AY+V + + R++S I+ F+ + + + L V F + L+
Sbjct: 116 ILNKAYKVPVSPPYILRRVLS------------ILQFLVITLIITLTIV--FSTLVPMLI 161
Query: 175 LIIWNGRIYATML----ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+ G Y L LF + +++ LP K + + PG I W + A F
Sbjct: 162 DFSYQGLSYTRYLLIEFVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQ 221
Query: 231 YI-VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
Y+ +F +Y L ++ L+F YML + FI GA+ N
Sbjct: 222 YLKASFDQLDLIYGSLGGVVVSLLFFYMLSLIFIYGAKFN 261
>gi|206974201|ref|ZP_03235118.1| YihY family protein [Bacillus cereus H3081.97]
gi|206747441|gb|EDZ58831.1| YihY family protein [Bacillus cereus H3081.97]
Length = 289
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 14/270 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + + +D +A+ ++ LL++FP +VF L GF+ +V++++ PE
Sbjct: 19 DLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEPYVPED 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR
Sbjct: 77 AMSLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSFIKTRA 136
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALG--NLLLIIWN-GRIYATMLA 188
+S + L +I VF I V F A+G + +W+ R+ A+
Sbjct: 137 LSIVFTLA-----IIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ +Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANIYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ Y+ G +LG E+N +++++R
Sbjct: 252 IILMLWFYLTGWVILLGGEING--LLHHYR 279
>gi|15893462|ref|NP_346811.1| T-RNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|15022998|gb|AAK78151.1|AE007530_2 T-RNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|325507577|gb|ADZ19213.1| T-RNA-processing ribonuclease BN [Clostridium acetobutylicum EA
2018]
Length = 273
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 132/262 (50%), Gaps = 6/262 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ D I F E+D A+ S ++ +LS FPFI+F L G+ + ++ V+
Sbjct: 4 LLLDLISRFNEDDVPALGSQLAYYLVLSFFPFIIFIMTLIGYTSLNN--KEILMVLSRIM 61
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE I + +V++ L ++S + + +S G A+ LN+AY V E R++
Sbjct: 62 PESAFNLIHAAVAEVISTKHSQLMSLSLVLTIWSASAGFTAVIKGLNKAYGVQEARNFIK 121
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S + + ++ M F+ + + L Y+ + + ++ +W Y ++
Sbjct: 122 VRFVSILCTIGVAFIILTMMFLLILGRIILNYL-AYKLGFSHKVIAVWEAVRYLIFVSTA 180
Query: 191 IGLIFVHLFLPAAKSKIM--SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I IF L+ A K+M +LPG +F+ ++ ++ + F +Y+ F+ YS +Y + +I
Sbjct: 181 I-FIFTALYRYAPCKKLMWIEVLPGSLFSTLNLILASFGFAYYVNNFANYSVIYGSIGAI 239
Query: 249 MTCLVFLYMLGVFFILGAELNA 270
+ L +L+++ V ILG E+NA
Sbjct: 240 IILLTWLFLVAVIVILGGEINA 261
>gi|28212101|ref|NP_783045.1| ribonuclease BN [Clostridium tetani E88]
gi|28204544|gb|AAO36982.1| ribonuclease BN [Clostridium tetani E88]
Length = 282
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 142/264 (53%), Gaps = 16/264 (6%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWPE 72
+ I +E++ A+AS +S S LLS FPF++F L GF +++V + + P+
Sbjct: 14 NIINKIIEDEVPALASQLSYSLLLSFFPFLIFLMTLLGFSSIDNEYVLLELKTML---PD 70
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + ++++L L + S + + SS G A+ +N+AY E RS
Sbjct: 71 SAYELVYNTVIEILGTRDSNLLSFSIIFTVWTSSTGFRAVIKGINKAYDEKEKRSLPKVF 130
Query: 133 LISFGYVLLASVTL---VIMSFVFVAIP--LALAYVRKFFPALGNLLLIIWNGRIYATML 187
LIS +L++++L +I++ +F+ + L V+K +G+L + WN Y +L
Sbjct: 131 LIS----ILSTLSLGFLIILTVLFLVFGQLIGLYLVQKL--KMGSLFYLTWNIIRYIIIL 184
Query: 188 A-LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L + ++ F+P+ K + ++PG IF + W+ + +F++Y+ F+ YS +Y +
Sbjct: 185 SSLVVIFALMYKFIPSRKLRWREVMPGAIFATVGWLFSSFIFSYYVNNFANYSRIYGSIG 244
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+++ +V+LY+ + ILG ELNA
Sbjct: 245 AVIILMVWLYLTSIIIILGGELNA 268
>gi|257880157|ref|ZP_05659810.1| ribonuclease BN [Enterococcus faecium 1,230,933]
gi|257814385|gb|EEV43143.1| ribonuclease BN [Enterococcus faecium 1,230,933]
Length = 313
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS+FP I+ N+ FL Q TV+ + PE + + I I +L + GL +
Sbjct: 28 LLSLFPLIIAFGNILPFLHIDQ--ETVLTYLREVIPETVYQFIGPAIKDLLTQSSGGLLS 85
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+SALAA + +S + AL+I++N+AY V +++ I R S ++L + + ++ V
Sbjct: 86 VSALAALWSASQSINALQIAMNKAYGVENRKNFLIVRFFSLIVIVLFMIAISGVTIVLGL 145
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
L L ++ N + + T++ALF+ + ++L +P A+ K+ +I+PG I
Sbjct: 146 GQLILDAIQPIVQIPVNFIDQFQTLKWPITLVALFVIMFLIYLIVPNAQLKLKTIIPGTI 205
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F + W++ + +F+ Y F+T + Y + S + +++L ILG +NA
Sbjct: 206 FATVGWMLLSQVFSIYARYFATRISGYQIIGSFIVLMLWLNFAATIIILGGIINA 260
>gi|257893552|ref|ZP_05673205.1| ribonuclease BN [Enterococcus faecium 1,231,408]
gi|314940015|ref|ZP_07847208.1| YihY family protein [Enterococcus faecium TX0133a04]
gi|314941893|ref|ZP_07848757.1| YihY family protein [Enterococcus faecium TX0133C]
gi|314952420|ref|ZP_07855426.1| YihY family protein [Enterococcus faecium TX0133A]
gi|314993211|ref|ZP_07858591.1| YihY family protein [Enterococcus faecium TX0133B]
gi|314997801|ref|ZP_07862713.1| YihY family protein [Enterococcus faecium TX0133a01]
gi|257829931|gb|EEV56538.1| ribonuclease BN [Enterococcus faecium 1,231,408]
gi|313588173|gb|EFR67018.1| YihY family protein [Enterococcus faecium TX0133a01]
gi|313592292|gb|EFR71137.1| YihY family protein [Enterococcus faecium TX0133B]
gi|313595463|gb|EFR74308.1| YihY family protein [Enterococcus faecium TX0133A]
gi|313599318|gb|EFR78163.1| YihY family protein [Enterococcus faecium TX0133C]
gi|313640748|gb|EFS05328.1| YihY family protein [Enterococcus faecium TX0133a04]
Length = 326
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS+FP I+ N+ FL Q TV+ + PE + + I I +L + GL +
Sbjct: 41 LLSLFPLIIAFGNILPFLHIDQ--ETVLTYLREVIPETVYQFIGPAIKDLLTQSSGGLLS 98
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+SALAA + +S + AL+I++N+AY V +++ I R S ++L + + ++ V
Sbjct: 99 VSALAALWSASQSINALQIAMNKAYGVENRKNFLIVRFFSLIVIVLFMIAISGVTIVLGL 158
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
L L ++ N + + T++ALF+ + ++L +P A+ K+ +I+PG I
Sbjct: 159 GQLILDAIQPIVQIPVNFIDQFQTLKWPITLVALFVIMFLIYLIVPNAQLKLKTIIPGTI 218
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F + W++ + +F+ Y F+T + Y + S + +++L ILG +NA
Sbjct: 219 FATVGWMLLSQVFSIYARYFATRISGYQIIGSFIVLMLWLNFAATIIILGGIINA 273
>gi|77460571|ref|YP_350078.1| ribonuclease BN [Pseudomonas fluorescens Pf0-1]
gi|77384574|gb|ABA76087.1| putative ribonuclease [Pseudomonas fluorescens Pf0-1]
Length = 316
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 128/264 (48%), Gaps = 9/264 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF---VPTVIDVVF 67
++ I FV+++ AS ++ L S+FPFI+F L GFL F + ++V
Sbjct: 14 VMVRTITEFVDDEMSTYASALAYQMLFSLFPFILFLIALIGFLHLPDFFSWLRLQSELVL 73
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ D++ Q GL ++ + A Y +S GV + ++N AY VVE R
Sbjct: 74 PPQALEQVNPVIDQLQQ----SKGGLLSVGIVIALYTASAGVRLMMSAMNAAYDVVEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATM 186
+ +S Y + + L++ + + V P + ++ L +++ +W R +
Sbjct: 130 LWKRFPLSVIYTVGIAGMLLVAAALMVLGPQVMGWIAAQV-GLEEVIVTLWTIARWPVIV 188
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + + ++ +P K + I PG + + W++ ++ F Y+ TF+ Y+ MY +
Sbjct: 189 ILMMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIIASLGFAFYVKTFANYNAMYGSIG 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+I+ L++ Y+ +LGAE+NA
Sbjct: 249 AIIVLLLYFYISSAVLLLGAEMNA 272
>gi|149185317|ref|ZP_01863634.1| hypothetical protein ED21_19727 [Erythrobacter sp. SD-21]
gi|148831428|gb|EDL49862.1| hypothetical protein ED21_19727 [Erythrobacter sp. SD-21]
Length = 297
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 7/255 (2%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ A+L++FPF + GA + +G I+ V A P V+ I
Sbjct: 11 NDGFIHAGNLAYLAMLAIFPFFILGAAVFSAIGEESERAATINAVLYALPPVVGNVIEPV 70
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
V+ + L A A + + VE +R L RAY ++++ RL S G V+L
Sbjct: 71 ARDVVQARSGWLLWAGAFVALWTVGSLVETIRDILRRAYGTEATKAFWKYRLFSTG-VIL 129
Query: 142 ASVTLVIMSFV--FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF--IGLIFVH 197
+V L+++S + FV I A + +FP L + LL + RI LF + LIF
Sbjct: 130 GAVFLLMLSLMAQFV-IGTAQQVIEAYFPQLVDRLLELQLSRIVPA-FGLFGSLYLIFYT 187
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
L + PGV+ T + W+ + + +F TY Y GLA +M L F ++
Sbjct: 188 LTPSKYRRHRYPKWPGVLLTTLWWIAVTTIMPAVLSSFFTYDLTYGGLAGVMIALFFFWL 247
Query: 258 LGVFFILGAELNASM 272
+G+ ++GAELNA++
Sbjct: 248 VGLGVVIGAELNAAL 262
>gi|327438684|dbj|BAK15049.1| predicted membrane protein [Solibacillus silvestris StLB046]
Length = 311
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 7/263 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I D I D M + ++ LLS FP ++F L +L Q + D + P
Sbjct: 34 IQDLIYRTKNVDMSGMGAQLAYFFLLSFFPMLIFMVTLLPYLNLEQ--GQIFDFLSDVMP 91
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E + I + VL GL +I + + +S GV+AL SLNRAY V E R+ ++
Sbjct: 92 EEVYGLIETTLTDVLNNQNGGLLSIGIIGTLWSASRGVDALMKSLNRAYDV-EGRAGFLN 150
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-F 190
RL S + + A V +++++ VF + + + + +W + T L F
Sbjct: 151 RLWSLVFTI-ALVAVILIALVFPVFGQQIGNIVFGYLGVEESFANVWTFVRWITPPTLIF 209
Query: 191 IGLIFVHLFLPAAKSKIM--SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I + ++ +P ++ S++PG +F + W+V F+ YI F YS+ Y + +
Sbjct: 210 IVISVMYWIVPNTDPRLTMFSVIPGAVFATLGWLVLTYGFSFYINNFGNYSSTYGSIGGV 269
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ +++LY G+ ILG LNAS
Sbjct: 270 IILMLWLYFTGMIIILGGLLNAS 292
>gi|303242465|ref|ZP_07328946.1| ribonuclease BN [Acetivibrio cellulolyticus CD2]
gi|302589989|gb|EFL59756.1| ribonuclease BN [Acetivibrio cellulolyticus CD2]
Length = 281
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 135/269 (50%), Gaps = 14/269 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVF 67
+++ D F ++D A+AS ++ +L++FPF++F NL + + Q + + ++
Sbjct: 12 NVVKDLYFRFNDDDVPALASQLAYYFILAIFPFLIFLINLVSLTPITSEQALNDLSKII- 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I I QV + + S A + SSNG+ A+ SLN+AY E R+
Sbjct: 71 ---PTAVYDIIRGVIGQVAQTNRETFLSFSMAATLWVSSNGMNAVVKSLNKAYDQHETRA 127
Query: 128 WYITRLISFGYVLLASVTLV-IMSFVFVAIPLALAYVRKFFPALG--NLLLIIWNG-RIY 183
++ R G ++A++ + F F+ + L R F LG N ++W R
Sbjct: 128 FWKVR----GLSIIATIAFAFTILFSFILLILGEIIGRNVFIFLGFSNSFKMLWPYIRFI 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L +FI ++ ++P + K + G +F+ W + ++LF+ Y+ FS YS+ Y
Sbjct: 184 IPVLIMFIVFTLLYRYMPNRRMKYYEVFAGSLFSSFGWFITSILFSLYVNNFSNYSSTYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASM 272
+ I+ +++LY + + +LG ELNAS+
Sbjct: 244 SIGGIILLIIWLYWISIIILLGGELNASL 272
>gi|227550490|ref|ZP_03980539.1| ribonuclease BN [Enterococcus faecium TX1330]
gi|257888517|ref|ZP_05668170.1| ribonuclease BN [Enterococcus faecium 1,141,733]
gi|257897108|ref|ZP_05676761.1| ribonuclease BN [Enterococcus faecium Com12]
gi|257899047|ref|ZP_05678700.1| ribonuclease BN [Enterococcus faecium Com15]
gi|293377331|ref|ZP_06623535.1| YihY family protein [Enterococcus faecium PC4.1]
gi|293572525|ref|ZP_06683504.1| ribonuclease BN [Enterococcus faecium E980]
gi|227180391|gb|EEI61363.1| ribonuclease BN [Enterococcus faecium TX1330]
gi|257824571|gb|EEV51503.1| ribonuclease BN [Enterococcus faecium 1,141,733]
gi|257833673|gb|EEV60094.1| ribonuclease BN [Enterococcus faecium Com12]
gi|257836959|gb|EEV62033.1| ribonuclease BN [Enterococcus faecium Com15]
gi|291607442|gb|EFF36785.1| ribonuclease BN [Enterococcus faecium E980]
gi|292644023|gb|EFF62129.1| YihY family protein [Enterococcus faecium PC4.1]
Length = 307
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS+FP I+ N+ FL Q TV+ + PE + + I I +L + GL +
Sbjct: 41 LLSLFPLIIAFGNILPFLHIDQ--ETVLTYLREVIPETVYQFIGPAIKDLLTQSSGGLLS 98
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+SALAA + +S + AL+I++N+AY V +++ I R S ++L + + ++ V
Sbjct: 99 VSALAALWSASQSINALQIAMNKAYGVENRKNFLIVRFFSLIVIVLFMIAISGVTIVLGL 158
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
L L ++ N + + T++ALF+ + ++L +P A+ K+ +I+PG I
Sbjct: 159 GQLILDAIQPIVQIPVNFIDQFQTLKWPITLVALFVIMFLIYLIVPNAQLKLKTIIPGTI 218
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F + W++ + +F+ Y F+T + Y + S + +++L ILG +NA
Sbjct: 219 FATVGWMLLSQVFSIYARYFATRISGYQIIGSFIVLMLWLNFAATIIILGGIINA 273
>gi|56964680|ref|YP_176411.1| hypothetical protein ABC2916 [Bacillus clausii KSM-K16]
gi|56910923|dbj|BAD65450.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 276
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 18/261 (6%)
Query: 27 MASHISLSALLSVFPFIVFG-ANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
+A+ ++ +LS+FP ++F A ++ F + V +I+ F P I + +L
Sbjct: 25 LAATLAFYFILSIFPLMIFVLAGVSFFEINNDEVQNLINAYF---PGEIGDTFSRIVLNT 81
Query: 86 LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
+ P GL +I L + +SNG+ A S+NRAY + E R + R I+ G +V
Sbjct: 82 IGEPQAGLLSIGILGTLWSASNGINAFIRSVNRAYNIEETRHFLKLRSIAIGL----TVG 137
Query: 146 LVIMSFVFVAIPL------ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
+V++ + +A+P+ L P ++ ++ N R A + + L+ ++
Sbjct: 138 MVLLIIITLALPVFGNQILNLLEAFLLLPT--EVVAMLDNFRWIAAFAIMIVALMALYWI 195
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
P AK + L G IF I W + + F+ Y+ ++ Y + Y LA ++ + + ++ G
Sbjct: 196 APNAKQRFRDGLIGAIFATIGWQLISFFFSLYVSNYANYESTYGPLAGVIILMFWFFLTG 255
Query: 260 VFFILGAELNASMIIYYWRKK 280
+ I+GAE+NA++ ++ RKK
Sbjct: 256 IILIVGAEINATL--HHLRKK 274
>gi|69244644|ref|ZP_00602908.1| Ribonuclease BN [Enterococcus faecium DO]
gi|257882958|ref|ZP_05662611.1| ribonuclease BN [Enterococcus faecium 1,231,502]
gi|257885209|ref|ZP_05664862.1| ribonuclease BN [Enterococcus faecium 1,231,501]
gi|257891460|ref|ZP_05671113.1| ribonuclease BN [Enterococcus faecium 1,231,410]
gi|258614499|ref|ZP_05712269.1| ribonuclease BN, putative [Enterococcus faecium DO]
gi|260560536|ref|ZP_05832710.1| ribonuclease BN [Enterococcus faecium C68]
gi|261206549|ref|ZP_05921249.1| ribonuclease BN [Enterococcus faecium TC 6]
gi|289565459|ref|ZP_06445908.1| ribonuclease BN [Enterococcus faecium D344SRF]
gi|293553216|ref|ZP_06673853.1| ribonuclease BN [Enterococcus faecium E1039]
gi|293560238|ref|ZP_06676738.1| ribonuclease BN [Enterococcus faecium E1162]
gi|293568268|ref|ZP_06679592.1| ribonuclease BN [Enterococcus faecium E1071]
gi|294614679|ref|ZP_06694581.1| ribonuclease BN [Enterococcus faecium E1636]
gi|294619024|ref|ZP_06698519.1| ribonuclease BN [Enterococcus faecium E1679]
gi|294620967|ref|ZP_06700166.1| ribonuclease BN [Enterococcus faecium U0317]
gi|314950073|ref|ZP_07853360.1| YihY family protein [Enterococcus faecium TX0082]
gi|68196235|gb|EAN10664.1| Ribonuclease BN [Enterococcus faecium DO]
gi|257818616|gb|EEV45944.1| ribonuclease BN [Enterococcus faecium 1,231,502]
gi|257821061|gb|EEV48195.1| ribonuclease BN [Enterococcus faecium 1,231,501]
gi|257827820|gb|EEV54446.1| ribonuclease BN [Enterococcus faecium 1,231,410]
gi|260073538|gb|EEW61866.1| ribonuclease BN [Enterococcus faecium C68]
gi|260079259|gb|EEW66950.1| ribonuclease BN [Enterococcus faecium TC 6]
gi|289162788|gb|EFD10639.1| ribonuclease BN [Enterococcus faecium D344SRF]
gi|291588980|gb|EFF20804.1| ribonuclease BN [Enterococcus faecium E1071]
gi|291592417|gb|EFF24024.1| ribonuclease BN [Enterococcus faecium E1636]
gi|291594685|gb|EFF26067.1| ribonuclease BN [Enterococcus faecium E1679]
gi|291599425|gb|EFF30443.1| ribonuclease BN [Enterococcus faecium U0317]
gi|291602626|gb|EFF32841.1| ribonuclease BN [Enterococcus faecium E1039]
gi|291605810|gb|EFF35244.1| ribonuclease BN [Enterococcus faecium E1162]
gi|313643608|gb|EFS08188.1| YihY family protein [Enterococcus faecium TX0082]
Length = 307
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 2/235 (0%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS+FP I+ N+ FL Q TV+ + PE + + I I +L + GL +
Sbjct: 41 LLSLFPLIIAFGNILPFLHIDQ--ETVLTYLREVIPETVYQFIGPAIKDLLTQSSGGLLS 98
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+SALAA + +S + AL+I++N+AY V +++ I R S ++L + + ++ V
Sbjct: 99 VSALAALWSASQSINALQIAMNKAYGVENRKNFLIVRFFSLIVIVLFMIAISGVTIVLGL 158
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
L L ++ N + + T++ALF+ + ++L +P A+ K+ +I+PG I
Sbjct: 159 GQLILDAIQPIVQIPVNFIDQFQTLKWPITLVALFVIMFLIYLIVPNAQLKLKTIIPGTI 218
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F + W++ + +F+ Y F+T + Y + S + +++L ILG +NA
Sbjct: 219 FATVGWMLLSQVFSIYARYFATRISGYQIIGSFIVLMLWLNFAATIIILGGIINA 273
>gi|168334236|ref|ZP_02692437.1| hypothetical protein Epulo_04779 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 292
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 24/274 (8%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-----QFVPTVIDVVF 67
Y+ + F+ D ++ ++ +L++FPF++ NL ++ ++VP V+
Sbjct: 9 YNIKKRFLNHDVSPRSAQMTYYWILAIFPFLLMIINLISYVKIDSINFMEYVPKVV---- 64
Query: 68 GAWPEVIAKPITDEILQVL--AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P ++A P+ + + + G+F + A+ A + +S V L + AY VV+
Sbjct: 65 ---PSMVA-PLVESTVNSMIEKRSGTGIF-VGAVLALWSTSAAVNTLIKGIYLAYGVVDS 119
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF----PALGNLLLIIWN-G 180
R++ + +L Y LL + L+ M + + Y+ K F P L+ W+
Sbjct: 120 RNFVVRKLAGMMYSLLLAFILIAMVVLLIFGNKLGQYILKLFLVRYPKSYTLM---WDLT 176
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R+ + + L F+H +P K + PGV FT ISW V + LF+ Y+ FS Y +
Sbjct: 177 RLCLSWILLISSSYFIHRVIPRRHIKNRYLWPGVFFTAISWYVFSYLFSIYVEHFSNYGS 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
MY + I L++LY G+F ++GAE+NA ++I
Sbjct: 237 MYGSIGGIFVLLIWLYTNGLFILIGAEINAIILI 270
>gi|56418955|ref|YP_146273.1| transporter [Geobacillus kaustophilus HTA426]
gi|56378797|dbj|BAD74705.1| transporter [Geobacillus kaustophilus HTA426]
Length = 277
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + +++ GL + S +AA + +SNG+ A+ + NRAY V E R ++I
Sbjct: 65 PKEALHLIETNVYRLMNEQNGGLLSFSIIAAIWSASNGMSAIMRAFNRAYDVQEDRPFWI 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWNG-RIYATM 186
R G ++ ++ ++++ V + +P+ + F F ALG L +WN R +
Sbjct: 125 VR----GLSIVLTLGMIVVIIVALVLPVFGRIIGLFLFSALGLSQQFLEVWNAFRWVTSS 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L LF ++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L
Sbjct: 181 LLLFAVFTALYYFAPNKQLRCVNVVRGALFATAGWIAASLAFAYYVNNFADYTAMYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
++ +V+ Y+ G+ +LG ELNA
Sbjct: 241 GMIVLMVWFYLSGMILVLGGELNA 264
>gi|331085373|ref|ZP_08334459.1| hypothetical protein HMPREF0987_00762 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408156|gb|EGG87646.1| hypothetical protein HMPREF0987_00762 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 277
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 11/273 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+E + ++ ++ E A A+ + +LS+ PFI+ L Q+ P
Sbjct: 1 MKETIMKKYRLLNRIMDRISENHTGAYAAQSAFFIVLSMIPFIML------LLALVQYTP 54
Query: 61 TVIDVVFGAWPEVIAK---PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
V A V+ K P+ I+ + ++ + +++ L A + + GV A+ LN
Sbjct: 55 VTKADVIRAVTHVLPKTIYPMIVSIVNQVYNQSQAMISLTGLVAIWSAGRGVLAMSAGLN 114
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLI 176
Y E R++ RL + Y +L + +V +S V + L+ ++ +P + ++ +
Sbjct: 115 SVYGSKETRNYIYLRLRAAFYTVLFIIAIV-LSLVILGFGDRLSIFIVNHYPFMKGIIDL 173
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I N R A+++ L + + ++ FLP K+K + PG T I W + +F+ Y+ F+
Sbjct: 174 IINIRAVASIVVLTVFSMTIYHFLPNKKTKFIRQFPGAFLTAIGWAAASYIFSAYVNIFT 233
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+STMY + +IM +++LY +LG E+N
Sbjct: 234 GFSTMYGSMTTIMLIMLWLYACMYIMLLGGEVN 266
>gi|222151855|ref|YP_002561015.1| hypothetical protein MCCL_1612 [Macrococcus caseolyticus JCSC5402]
gi|222120984|dbj|BAH18319.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 342
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 131/255 (51%), Gaps = 12/255 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIAKPIT 79
++D +++ ++ LLS+FP ++F L + + P T+ +++ P A IT
Sbjct: 84 KDDAAGLSAQLAYYFLLSLFPMLIF---LLTLVPLFKVSPETITNMIAKNAPGDAANMIT 140
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
D I V+ GL + +AA + +SNG+ AL + N +Y V + R+ +++L+S
Sbjct: 141 DVISDVMNNANGGLLSFGLIAALWSASNGMTALMNAFNVSYEVEDARNPIVSKLLS---- 196
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIWNGRIYATMLALFIG-LIFVH 197
+L +V +V++ V +A+P+ + + F G W + L L + ++F
Sbjct: 197 VLFTVVMVLVFGVALALPVFGEQIGNYLFGQFGLESQFKWIFSLVKVALPLIVTFIVFTT 256
Query: 198 LFL--PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
L+ P K + S++PG +F I W+ + LF +Y+ F YS Y + I+ +++L
Sbjct: 257 LYAIAPNIKLQFKSVIPGALFATIVWIGASFLFGYYVSNFGNYSKTYGSIGGIIVLMLWL 316
Query: 256 YMLGVFFILGAELNA 270
Y+ G I+G+++NA
Sbjct: 317 YLTGFIIIIGSQINA 331
>gi|254520560|ref|ZP_05132616.1| YihY family protein [Clostridium sp. 7_2_43FAA]
gi|226914309|gb|EEH99510.1| YihY family protein [Clostridium sp. 7_2_43FAA]
Length = 280
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 132/262 (50%), Gaps = 8/262 (3%)
Query: 14 DAIEHFV----EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+I +F+ +D +A+ + ++ +L+ FPF++F L GF + ++D +
Sbjct: 14 DSIIYFIVKINNDDIFALGAQLAYYLILAFFPFLIFLLTLIGFSRLNS--ADILDGLRTI 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + +++++ GL S + + + +S+G A+ +N+AY + E RS+
Sbjct: 72 LPNNVFTLVDTTVVEIVDTQNAGLLGASIVLSMWSASSGFRAVIKGVNKAYDIREHRSFI 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLA 188
I+ + L ++ +++ + V + Y+ FP N+L IWN R +LA
Sbjct: 132 KRAFIAIFFTLALALIIMLTLAMLVFGEIIGKYLISVFP-FQNILRNIWNISRYIVVILA 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++ + PA K + PG I + + W+V ++ F++YI + YS +Y + ++
Sbjct: 191 MIWIFACIYRYTPARKIPWKEVFPGAIVSTLGWIVVSLAFSYYINNIANYSRLYGSVGAV 250
Query: 249 MTCLVFLYMLGVFFILGAELNA 270
+ +LY+ + ILGAE+N+
Sbjct: 251 FILMTWLYITSMILILGAEINS 272
>gi|311029165|ref|ZP_07707255.1| ribonuclease BN [Bacillus sp. m3-13]
Length = 274
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 10/207 (4%)
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
I + ++L L + +A +F+SNG+ A+ + NRA+ V E R ++I R G
Sbjct: 71 IESNVSRILNEQRGDLLSFGIIATIWFASNGINAIVRAFNRAFDVNENRHFFIVR----G 126
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWNG-RIYATMLALFIGL 193
+L ++ +V + V + +P+ + F F + G L IWN R + + LF
Sbjct: 127 TAILLTLAMVFVIIVALLLPVFGREIGLFIFSSYGLSEEFLTIWNTIRWGVSFVILFFVF 186
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++L P + + +L G F + W+ +VLF++Y+ F Y+ MY L I+ LV
Sbjct: 187 TCLYLAAPNIRLHLKDVLAGSFFATVGWMTVSVLFSYYVSNFGNYTAMYGSLGGIIVLLV 246
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
+ Y+ G+ I+G E+NA I+ W+K
Sbjct: 247 WFYLSGLMIIIGGEINA--ILLQWKKS 271
>gi|85709734|ref|ZP_01040799.1| hypothetical protein NAP1_12653 [Erythrobacter sp. NAP1]
gi|85688444|gb|EAQ28448.1| hypothetical protein NAP1_12653 [Erythrobacter sp. NAP1]
Length = 365
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 1/252 (0%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
+DG+ A +++ ++L++FPF + GA L G +++ V P AK I
Sbjct: 77 QDGFIHAGNLAYLSMLAIFPFFILGAALFELFGGRDLAVSMVQTVVAGLPPSAAKVIAPV 136
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
V+ L A A + S+ +E++R L RAY S+ RL+S G +L
Sbjct: 137 AEDVVYARTGWLLWFGAAVALWTVSSLIESIRDILRRAYGTRARHSFVRYRLLSAGIILG 196
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY-ATMLALFIGLIFVHLFL 200
A V L+ F V I A + + FP L L + R+ A L L + L+F L
Sbjct: 197 AVVVLMASLFAQVMIGTAQVVIMERFPQLLEALGTLRLSRVVPAAGLMLSLYLLFYTLTP 256
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
++K+ PG +FT + W + + +F TY Y +A I+ L F +++G+
Sbjct: 257 TEYRAKVYPKWPGALFTAVWWFGVTIALPPIMRSFFTYDLTYGSMAGIIIALFFFWLVGL 316
Query: 261 FFILGAELNASM 272
++GAELNA++
Sbjct: 317 GLVIGAELNAAL 328
>gi|261418745|ref|YP_003252427.1| ribonuclease BN [Geobacillus sp. Y412MC61]
gi|319765561|ref|YP_004131062.1| ribonuclease BN [Geobacillus sp. Y412MC52]
gi|261375202|gb|ACX77945.1| ribonuclease BN [Geobacillus sp. Y412MC61]
gi|317110427|gb|ADU92919.1| ribonuclease BN [Geobacillus sp. Y412MC52]
Length = 277
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + +++ GL + S +AA + +SNG+ A+ + NRAY V E R ++I
Sbjct: 65 PKEALHLIETNVYRLMNEQNGGLLSFSIIAAIWSASNGMSAIMRAFNRAYDVQEDRPFWI 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWNG-RIYATM 186
R G ++ ++ ++++ V + +P+ + F F ALG L +WN R +
Sbjct: 125 VR----GLSIVLTLGMIMVIIVALVLPVFGRIIGLFLFSALGLSQQFLEVWNAFRWVTSS 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L LF ++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L
Sbjct: 181 LLLFAVFTALYYFAPNKQLRCVNVVRGALFATAGWIAASLAFAYYVNNFADYTAMYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
++ +V+ Y+ G+ +LG ELNA
Sbjct: 241 GMIVLMVWFYLSGMILVLGGELNA 264
>gi|325660901|ref|ZP_08149529.1| hypothetical protein HMPREF0490_00261 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472975|gb|EGC76185.1| hypothetical protein HMPREF0490_00261 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 277
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 130/273 (47%), Gaps = 11/273 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+E + ++ + E A A+ + +LS+ PFI+ L Q+ P
Sbjct: 1 MKETIMKKYRLLNRIMNRISENHTGAYAAQSAFFIVLSMIPFIML------LLALVQYTP 54
Query: 61 TVIDVVFGAWPEVIAK---PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
V A V+ K P+ I+ + ++ + +++ L A + + GV A+ LN
Sbjct: 55 VTKADVIRAVTHVLPKTIYPMIVSIVNQVYNQSQAMISLTGLVAIWSAGRGVLAMSAGLN 114
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLI 176
Y E R++ RL + Y +L + +V +S V + L+ ++ +P + ++ +
Sbjct: 115 SVYGSKETRNYIYLRLRAAFYTVLFIIAIV-LSLVILGFGDRLSIFIVNHYPFMKGIIDL 173
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I N R A+++ L + + ++ FLP K+K + PG T I W + +F+ Y+ F+
Sbjct: 174 IINIRAVASIVVLTVFSMTIYHFLPNKKTKFIRQFPGAFLTAIGWAAASYIFSAYVNIFT 233
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+STMY + +IM +++LY +LG E+N
Sbjct: 234 GFSTMYGSMTTIMLIMLWLYACMYIMLLGGEVN 266
>gi|49086024|gb|AAT51322.1| PA2751 [synthetic construct]
Length = 300
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 31/278 (11%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-------- 59
+F ++ + F+E D AS ++ L S+FPF++ L G+L +F
Sbjct: 11 LFGLVKRTVNEFLEGDMPTYASALAYQMLFSLFPFLLVLITLVGYLHLPEFFAWLREQAA 70
Query: 60 ----PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
P +D V P+ D++ Q GL I A + SS G+ ++ I+
Sbjct: 71 LLLPPEAMDQV---------NPVIDQLQQ----QKGGLLPIGIAVALWTSSAGIRSMMIA 117
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
LN AY V E R + +S Y L ++ L++ + + V P +A++ L L+
Sbjct: 118 LNAAYDVKESRPVWKRFSLSILYTLGIALLLLVAAGLMVTGPQVIAWIAGLV-GLEQYLV 176
Query: 176 IIWNGRIYATMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+W + LA+F+ ++ V LF +P + + I PG + + I+W+ ++ + Y+
Sbjct: 177 TLWTWLRWP--LAVFLLMLAVALFYYLVPDVEQRFRFITPGSVLSVIAWIAASLAYGFYV 234
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F+ Y+ MY + +I+ L++ Y+ + GAELNA
Sbjct: 235 KNFANYNAMYGSIGAIIILLLYFYLSAAVVLFGAELNA 272
>gi|297531287|ref|YP_003672562.1| ribonuclease BN [Geobacillus sp. C56-T3]
gi|297254539|gb|ADI27985.1| ribonuclease BN [Geobacillus sp. C56-T3]
Length = 277
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + +++ GL + S +AA + +SNG+ A+ + NRAY V E R ++I
Sbjct: 65 PKEALHLIETNVHRLIDEQNGGLLSFSIIAAIWSASNGMSAIMRAFNRAYDVQEDRPFWI 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWNG-RIYATM 186
R G ++ ++ ++++ V + +P+ + F F ALG L +WN R +
Sbjct: 125 VR----GLSIVLTLGMIMVIIVALVLPVFGRIIGLFLFSALGLSQQFLEVWNAFRWVTSS 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L LF ++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L
Sbjct: 181 LLLFAVFTALYYFAPNKQLRCVNVVRGALFATAGWIAASLAFAYYVNNFADYTAMYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
++ +V+ Y+ G+ +LG ELNA
Sbjct: 241 GMIVLMVWFYLSGMILVLGGELNA 264
>gi|302876247|ref|YP_003844880.1| ribonuclease BN [Clostridium cellulovorans 743B]
gi|307686979|ref|ZP_07629425.1| ribonuclease BN [Clostridium cellulovorans 743B]
gi|302579104|gb|ADL53116.1| ribonuclease BN [Clostridium cellulovorans 743B]
Length = 286
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 12/270 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPE 72
A++ + E+ ++ASHISL+ LLS FP +VF LAG+ + Q + ++D + P
Sbjct: 19 AVKRYNEDAADSLASHISLNLLLSFFPIMVFLLTLAGYSPIEGDQVIALILDFI----PT 74
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + I QVL L ++S L Y +S G +A+ + LN AY V E R + +
Sbjct: 75 EAHTLMKNTIYQVLDHKNPTLLSLSLLTTMYGASRGFKAILLGLNIAYDVDENRGFIVRN 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA-LFI 191
L++ + + ++ + V ++ N IIW YA M + ++I
Sbjct: 135 LLAIFFTFAIVLLVIGSLLLLVLGQTIWDFIENMLDLPDNFF-IIWTFIRYAGMFSIMYI 193
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ A K ++ G +FT ISW V + F+ Y+ F Y+ +Y G+A +
Sbjct: 194 TFAILYAKSSAIKLPFKTVRYGTLFTTISWFVVSYGFSFYVDNFGNYANIYGGIAGLFIM 253
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+++L ++ + G ELNA+ IYY K P
Sbjct: 254 ILWLNLMSSVILFGGELNAA--IYY--KNP 279
>gi|229543009|ref|ZP_04432069.1| ribonuclease BN [Bacillus coagulans 36D1]
gi|229327429|gb|EEN93104.1| ribonuclease BN [Bacillus coagulans 36D1]
Length = 280
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 109/214 (50%), Gaps = 8/214 (3%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+++V P K I + +VL GL + +A + +SNG+ A+ +LNRAY
Sbjct: 62 DVLNMVRHFAPSQSFKLIETTLKEVLTNRHGGLLSFGMIATLWSASNGMNAVIKALNRAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL----ALAYVRKFFPALGNLLLI 176
+V E R + RL+S ++ ++ ++I+ + IP+ + YV +F +L +
Sbjct: 122 KVEESRPPVMQRLMS----VMLTLGMIIVFIAVILIPVFGEQLIHYVFSYFGLPNDLKNM 177
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I R T + LFI ++ F P K ++++PG IF + W+V ++ + Y+ F
Sbjct: 178 INILRWVLTPVLLFIVFALLYFFAPNEKFGCLTVVPGAIFATVGWIVASLALSFYVSHFG 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y+ Y L ++ +++ Y+ G+ I G ELNA
Sbjct: 238 NYNATYGSLGGMIIMMLWFYISGIILIFGGELNA 271
>gi|254796762|ref|YP_003081598.1| YihY family protein [Neorickettsia risticii str. Illinois]
gi|254590007|gb|ACT69369.1| YihY family protein [Neorickettsia risticii str. Illinois]
Length = 279
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 138/279 (49%), Gaps = 17/279 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGA- 55
M+ F ++ +Y+ + H G A ++S LLS+FPF+ F ++A +GA
Sbjct: 1 MKRIFAVLKISLYNMLYH----GGSEYAGYLSFLLLLSIFPFLFFFTAVAGHIANIIGAS 56
Query: 56 -HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
++ ++ V PE I + I I ++L P GL T++ L A + +S+ VE L+
Sbjct: 57 SYEITRKLLSVFIENVPENIIEGIMPYIKEILEGPTHGLLTLTILGAIWTASSIVEGLKA 116
Query: 115 SLNRAYR--VVEMRSWYI-TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
++N+AY + S YI RLIS LL SV ++ VF+ P + K L
Sbjct: 117 AVNKAYNFGTEALVSEYILRRLISVIQFLLISVIIL----VFLLFPTIYPLLTKKVSFLH 172
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
L W T +F + +++F P K ++PG I W++ ++ F+ Y
Sbjct: 173 TLKRPSWLPYSTITTCCVFFFVSALYIFFPKEKQGFCDVIPGSIMVVSLWILTSIAFSFY 232
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ +F+ + +Y +A I+ +++ Y+L + FI GAE+NA
Sbjct: 233 LHSFAQMNIIYGSIAGIIVVMLYFYLLNLCFIYGAEINA 271
>gi|138894066|ref|YP_001124519.1| ribonuclease BN [Geobacillus thermodenitrificans NG80-2]
gi|134265579|gb|ABO65774.1| Ribonuclease BN [Geobacillus thermodenitrificans NG80-2]
Length = 273
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 108/207 (52%), Gaps = 14/207 (6%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + ++ V L ++S + A + +SNG+ A+ + NRAY V E R +++
Sbjct: 61 PKEALHLIETNVHHLMDVQNGKLLSLSIIGAVWSASNGMRAIMRAFNRAYDVEENRPFWV 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK----FFPALG--NLLLIIWNG-RIY 183
R +S ++TL +++ + VA+ L + + R F ALG L +WN R
Sbjct: 121 ARGLS------VALTLGMIAVIIVALVLPV-FGRTIGLFLFSALGLSEQFLTVWNAFRWT 173
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L LF ++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY
Sbjct: 174 TSSLLLFAVFTALYYFAPNKQLRCVNVVRGALFATAGWIATSLAFAYYVNHFANYTAMYG 233
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA 270
L ++ +++LY+ G+ +LG E+NA
Sbjct: 234 SLGGLIVLMIWLYLSGMILVLGGEMNA 260
>gi|196250266|ref|ZP_03148959.1| ribonuclease BN [Geobacillus sp. G11MC16]
gi|196210155|gb|EDY04921.1| ribonuclease BN [Geobacillus sp. G11MC16]
Length = 277
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 108/207 (52%), Gaps = 14/207 (6%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + ++ V L ++S + A + +SNG+ A+ + NRAY V E R +++
Sbjct: 65 PKEALHLIETNVHHLMDVQNGKLLSLSIIGAVWSASNGMRAIMRAFNRAYDVEENRPFWV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK----FFPALG--NLLLIIWNG-RIY 183
R +S ++TL +++ + VA+ L + + R F ALG L +WN R
Sbjct: 125 ARGLS------VALTLGMIAVIIVALVLPV-FGRTIGLFLFSALGLSEQFLTVWNAFRWT 177
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L LF ++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY
Sbjct: 178 TSSLLLFAVFTALYYFAPNKQLRCVNVVRGALFATAGWIATSLAFAYYVNHFANYTAMYG 237
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA 270
L ++ +++LY+ G+ +LG E+NA
Sbjct: 238 SLGGLIVLMIWLYLSGMILVLGGEMNA 264
>gi|223044001|ref|ZP_03614041.1| transporter [Staphylococcus capitis SK14]
gi|222442544|gb|EEE48649.1| transporter [Staphylococcus capitis SK14]
Length = 417
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 127/258 (49%), Gaps = 16/258 (6%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++D +A+ ++ +L++FP ++F L LG QF+ D + + + T
Sbjct: 84 KDDASGLAAQMTYHFVLAMFPMLIF---LLTLLG--QFITINTDQINQKVSQYVPDQSTA 138
Query: 81 EILQ-----VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+++ + G+ +I + A + +SNG+ A+ S N AY V + R+ ++ +++S
Sbjct: 139 DVITKIFSGISDSANGGVLSIGLILAIWSASNGMSAIINSFNVAYDVEDSRNGFVLKILS 198
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN---GRIYATMLALFIG 192
Y L+ + V+ V I L + F LG + W RI ++ + I
Sbjct: 199 VLYTLVLGIVFVV---AIVLITLGPVISKFLFGPLGLDKQVEWVFDLVRIVLPLIIIIIL 255
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ P K+K+ S+LPG +FT I W+VG+ LF YI F Y+ Y LA I+
Sbjct: 256 FTVLYSVAPNVKTKLRSVLPGALFTSIIWLVGSFLFGWYISNFGNYNKTYGSLAGIIILF 315
Query: 253 VFLYMLGVFFILGAELNA 270
++LY+ I+GAE+NA
Sbjct: 316 LWLYITSFIIIIGAEINA 333
>gi|190571310|ref|YP_001975668.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018707|ref|ZP_03334515.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357582|emb|CAQ55023.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995658|gb|EEB56298.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 271
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 29/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV----FGANLAGFLGAH 56
+++++ IV+ +Y A+ + DG A ++S LLS+FPF++ + A FL +
Sbjct: 2 LQKFYSIVY-CLYRALIDTIYNDGVEHAGYLSFLILLSIFPFLIVLIAMASTFANFLDQY 60
Query: 57 QFV-PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ID + P+ I + I ++++ P + L T++ + A + +S+ +E R
Sbjct: 61 NVGWAFIIDNM----PQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGFRTI 116
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
LN+AY+ V + S YI R + L I+ F+ + + L V FF + L+
Sbjct: 117 LNKAYK-VPVSSPYIWRRV-----------LSILQFLVITLVTTLTIV--FFTLVPMLID 162
Query: 176 IIWNGRIYATML----ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ G Y L LF + +++ LP K + + PG I W + A F Y
Sbjct: 163 FSYQGLSYTRYLLIEFVLFTIVSWLYFTLPNIKQNLSDVFPGSCVAVILWTISASAFKQY 222
Query: 232 I-VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ +F + +Y L ++ L+F Y+L + FI GA+ N
Sbjct: 223 LKASFDQLNLIYGSLGGVVVSLLFFYVLSLIFIYGAKFN 261
>gi|168185392|ref|ZP_02620027.1| ribonuclease BN [Clostridium botulinum C str. Eklund]
gi|169296339|gb|EDS78472.1| ribonuclease BN [Clostridium botulinum C str. Eklund]
Length = 271
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 135/279 (48%), Gaps = 38/279 (13%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVF 67
II+ + +++ +A+AS ++ S LLS FPF++F +A F L + + T+ +++
Sbjct: 8 KIIFKLLYKLKKDEIFALASQLAYSLLLSFFPFLIFLFTVASFSSLQSEGIIMTLKNII- 66
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + + + L + S + + +SNG +A+ +LN+AY E RS
Sbjct: 67 ---PDSAYNLVYSILNETFEASNVNLLSFSFIITIWIASNGFKAVIRALNKAYGEEEERS 123
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-------------- 173
+ + + ++ VI++F+ + F LGN+
Sbjct: 124 FIKIQF-------MGIISTVILTFLII--------FSLFILVLGNIIGLKIITMLSLPIS 168
Query: 174 LLIIWNGRIYATMLALFIGLIF--VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
L IWN Y ML +F+ +IF V+ P K +LPG IF I W++ ++ F+ Y
Sbjct: 169 LYFIWNVLRYFVML-IFMIIIFAIVYKITPCRKLTFKDVLPGAIFATIGWIIVSLGFSFY 227
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ F+ YS +Y + +++ LV+L++ + ++G E+NA
Sbjct: 228 VDNFANYSRLYGSIGAVIVLLVWLFLSSIIILIGGEINA 266
>gi|42521087|ref|NP_967002.1| ribonuclease BN family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410828|gb|AAS14936.1| ribonuclease, BN family [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 271
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 31/279 (11%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV----FGANLAGFLGAHQ 57
++++ IV+ +Y A+ + DG A ++S LLS+FPF++ + A FL +
Sbjct: 3 QKFYSIVY-CLYRALIDTIYNDGVEHAGYLSFLILLSIFPFLIVLMAMASTFANFLDQYN 61
Query: 58 FVPTVIDVVF--GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
I VF P+ I + I ++++ P + L T++ + A + +S+ +E LR
Sbjct: 62 -----IGWVFIIDNMPQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTI 116
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
LN+AY+ + + R++S I+ F+ + + + L V F + L+
Sbjct: 117 LNKAYKAPVSPPYILRRVLS------------ILQFLVITLIITLTIV--FSTLVPMLID 162
Query: 176 IIWNGRIYATML----ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ G Y L LF + +++ LP K + + PG I W + A F Y
Sbjct: 163 FSYQGLSYTRYLLIEFVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQY 222
Query: 232 I-VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ +F +Y L ++ L+F YML + FI GA+ N
Sbjct: 223 LKASFGQLDLIYGSLGGVVVSLLFFYMLSLIFIYGAKFN 261
>gi|242371808|ref|ZP_04817382.1| ribonuclease BN [Staphylococcus epidermidis M23864:W1]
gi|242350509|gb|EES42110.1| ribonuclease BN [Staphylococcus epidermidis M23864:W1]
Length = 418
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 25/270 (9%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA----WPEVIAK 76
++D +A+ ++ +L++FP ++F L LG QF+ D + P+
Sbjct: 84 KDDASGLAAQMTYHFVLAMFPMLIF---LLTLLG--QFITINTDQINHKVSQYIPDQSTA 138
Query: 77 PITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ +I ++ A G + +I + A + +SNG+ A+ S N AY V + R+ + +++S
Sbjct: 139 DVVTKIFSSISDSANGGVLSIGLILAIWSASNGMSAIINSFNVAYDVEDARNGIVLKILS 198
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
Y L+ + V+ V I L + F LG + W I+ + + +I
Sbjct: 199 VIYTLVLGIVFVV---AIVLITLGPVISKFLFGPLGLDKQVEW---IFDVVRIVLPLIII 252
Query: 196 VHLFL------PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ LF P K+K+ S+LPG +FT I W+VG+ LF YI F Y+ Y LA I+
Sbjct: 253 IILFTVLYSVAPNVKTKLRSVLPGALFTSIIWLVGSFLFGWYISNFGNYNKTYGSLAGII 312
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++LY+ I+GAE+NA I + RK
Sbjct: 313 ILFLWLYITSFIIIIGAEINA---IIHQRK 339
>gi|149183505|ref|ZP_01861932.1| hypothetical protein BSG1_15038 [Bacillus sp. SG-1]
gi|148848777|gb|EDL63000.1| hypothetical protein BSG1_15038 [Bacillus sp. SG-1]
Length = 280
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 14/194 (7%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + I I +V++ GL + S +A + +SNG+ A+ SLN AY V E RS+ +
Sbjct: 71 PGETMQMIQSTINEVMSNRNTGLLSFSIIATIWSASNGMNAIVKSLNDAYEVEESRSYIV 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK----FFPALG--NLLLIIWNGRIYA 184
TRL+S V + M FVF+ L + ++ F G + L IW +A
Sbjct: 131 TRLMSI-------VLTIAMIFVFIIALLLPVFGKQIGLFLFSQFGFSDQFLTIWGAIRWA 183
Query: 185 -TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + LFI + ++ P+ K K +S +PG +F + WV ++ F++Y+ F YS Y
Sbjct: 184 ISPIILFIVFVGLYFIAPSKKIKCLSAVPGAVFAALGWVGASLAFSYYVSNFGNYSATYG 243
Query: 244 GLASIMTCLVFLYM 257
+ I+ +++ Y+
Sbjct: 244 SIGGIIVLMIWFYL 257
>gi|314934048|ref|ZP_07841411.1| YihY family protein [Staphylococcus caprae C87]
gi|313653159|gb|EFS16918.1| YihY family protein [Staphylococcus caprae C87]
Length = 417
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 16/258 (6%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++D +A+ + +L++FP ++F L LG QF+ D + + + T
Sbjct: 84 KDDASGLAAQMMYHFVLAMFPMLIF---LLTLLG--QFITINTDQINQKVSQYVPDQSTA 138
Query: 81 EILQ-----VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+++ + G+ +I + A + +SNG+ A+ S N AY V + R+ ++ +++S
Sbjct: 139 DVITKIFSGISDSANGGVLSIGLILAIWSASNGMSAIINSFNVAYDVEDSRNGFVLKILS 198
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN---GRIYATMLALFIG 192
Y L+ + V+ V I L + F LG + W RI ++ + I
Sbjct: 199 VLYTLVLGIVFVV---AIVLITLGPVISKFLFGPLGLDKQVEWVFDLVRIVLPLIIIIIL 255
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ P K+K+ S+LPG +FT I W+VG+ LF YI F Y+ Y LA I+
Sbjct: 256 FTVLYSVAPNVKTKLRSVLPGALFTSIIWLVGSFLFGWYISNFGNYNKTYGSLAGIIILF 315
Query: 253 VFLYMLGVFFILGAELNA 270
++LY+ I+GAE+NA
Sbjct: 316 LWLYITSFIIIIGAEINA 333
>gi|58584733|ref|YP_198306.1| tRNA processing exoribonuclease BN [Wolbachia endosymbiont strain
TRS of Brugia malayi]
gi|58419049|gb|AAW71064.1| tRNA processing exoribonuclease BN [Wolbachia endosymbiont strain
TRS of Brugia malayi]
Length = 274
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV----FGANLAGFLGAH 56
+++++ I++ +Y A+ + DG A ++S LLS+FPF++ + A FL +
Sbjct: 5 LKKFYGIIY-CLYHALIDTIYNDGMEHAGYLSFLILLSIFPFLIVLMALASTFANFLDQY 63
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
T I P+ I + I ++++ P + L T++ + A + +S+ +E LR L
Sbjct: 64 NIGWTFI---IDNMPQDILASLMPRIREIISGPPQSLLTLAIVGAIWTASSTIEGLRTIL 120
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N+AY+V + + R++S L+ + + + +P+ + +
Sbjct: 121 NKAYKVPVSPPYVLRRILSILQFLIITFIITLTIVFSTLVPMLIDFS------------- 167
Query: 177 IWNGRIYATML----ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
++G Y L LFI + +++ LP + + + PG + W V A F Y+
Sbjct: 168 -YHGLSYTRYLLIEFVLFIVVSWLYFMLPNIRQNVSDVFPGSYIAVMLWTVSASAFKQYL 226
Query: 233 -VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+F +Y L ++ L+F YM+ + FI GA+ N
Sbjct: 227 RASFDQLDLIYGSLGGVVVSLLFFYMVSLIFIYGAKFN 264
>gi|297624536|ref|YP_003705970.1| ribonuclease BN [Truepera radiovictrix DSM 17093]
gi|297165716|gb|ADI15427.1| ribonuclease BN [Truepera radiovictrix DSM 17093]
Length = 289
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 129/265 (48%), Gaps = 9/265 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ A F E+D AS ++ L S+FPFI+F L GFL +P + + G
Sbjct: 12 FAVLRRAFGKFGEDDMGTYASALAYQVLFSLFPFIIFLVALLGFLN----IPEFFEYLRG 67
Query: 69 AWPEVIAKPITDEILQVL---AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
EV+ + D++ Q++ P GL ++ L A + +S GV A +LN AY V E
Sbjct: 68 QANEVLPAQVADQVNQIIDEIEQPRGGLLSLGILVALWTASAGVRATMNALNVAYGVSEG 127
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYA 184
R + +S Y + + L+ + + + P ++++ + N+ + +WN R+
Sbjct: 128 RPVWKRMPLSLLYTVGLAAMLIAAAALLIFGPQVMSWLGELV-GFANIFVTLWNLLRLPV 186
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L + + V+ P + + + I PG + + W++ + F+ Y+ F+ +S Y
Sbjct: 187 AVVLLMLVVALVYYAFPDTEQRFVFITPGSVLAVLVWLLASWGFSLYVQNFADFSATYGS 246
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
L +++ L + Y+ + GAE+N
Sbjct: 247 LGAVVVILFYFYISASVLLFGAEIN 271
>gi|15615917|ref|NP_244221.1| hypothetical protein BH3355 [Bacillus halodurans C-125]
gi|10175978|dbj|BAB07074.1| BH3355 [Bacillus halodurans C-125]
Length = 272
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 14/242 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+LS+FP I+F L + Q + ++ PE +A T IL V++ P GL +
Sbjct: 31 MLSIFPLIIFILALIPYFSIDQ--QYLYQIIVDYLPEDLADVFTSVILDVVSRPQGGLVS 88
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS----FGYVLLASVTLVIMSF 151
ALAA + +SNG+ AL ++NR Y V E RS Y R +S G +L+ TL++ F
Sbjct: 89 FGALAAIWTASNGMNALIRAVNRCYAVEETRSLYNLRFLSIMLTIGMMLVFVTTLLLPVF 148
Query: 152 VFVAIPLA--LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS 209
+ I L L V + ++ N L R + + I LI ++L P K+
Sbjct: 149 GHLIIQLLDWLFIVPEGTASVLNAL------RWIVGICLMTIILIVIYLLAPNTSLKLKD 202
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
++ G + I W + + F+ Y+ F +S Y L ++ +++ ++ + I+G E+N
Sbjct: 203 VVTGAVVATIGWQLISYGFSAYVSNFGNFSATYGSLGGVIVLMLWFFLSSLMLIIGGEVN 262
Query: 270 AS 271
A+
Sbjct: 263 AA 264
>gi|258508049|ref|YP_003170800.1| ribonuclease BN-like family protein [Lactobacillus rhamnosus GG]
gi|257147976|emb|CAR86949.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus GG]
gi|259649370|dbj|BAI41532.1| ribonuclease BN [Lactobacillus rhamnosus GG]
Length = 334
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 135/269 (50%), Gaps = 16/269 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
AI + + A+ ++ LLS+FP I+F AN +LG ++ + A P +
Sbjct: 46 AINRISDSNIGQSAAALAYYTLLSLFPLILFVANALPYLGLK--YSSLATYLTQAVPANV 103
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +L + GL I A+A + +S GV L++ N+ Y V +++ I RL+
Sbjct: 104 MEWLDPIIANLLDSSSGGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQNFIIQRLL 163
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL------LIIWNG-RIYATML 187
S +L + TL+I V AI +A A+ R+F L LL L +N R T+
Sbjct: 164 S----MLMTFTLII---VMGAILIAFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITVT 216
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALFI ++F+ FLP K K+ ++LPG FT I W++ A F+ Y+ F T Y + +
Sbjct: 217 ALFIIIMFLDYFLPNVKIKMWTVLPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIGT 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++L + + GA +NA Y+
Sbjct: 277 FIAIMLWLNFSALVLLWGAVINALTAEYF 305
>gi|295702560|ref|YP_003595635.1| YihY family protein [Bacillus megaterium DSM 319]
gi|294800219|gb|ADF37285.1| YihY family protein [Bacillus megaterium DSM 319]
Length = 279
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 130/259 (50%), Gaps = 15/259 (5%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
++++ ++ LLS+FPF++F L GFL ++D+V P+ I + +
Sbjct: 27 SLSAELAYYLLLSLFPFLIFLITLIGFLPLES--TDLLDLVENVAPQQTLHMIESNVSHI 84
Query: 86 LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR----LISFGYVLL 141
+ + L + +A + +SNG+ A+ + NRAY V E R + + R L++F + +
Sbjct: 85 IGSHNEKLLSFGIIATMWSASNGINAIVRAFNRAYHVQENRPFLVARGMAVLLTFAMIFV 144
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFVHLFL 200
V L++ F + I L L+ F L +W+ R + L LF ++ F
Sbjct: 145 IIVALLLPVFGHM-IGLYLSSTFGF----SETFLALWSASRWIISGLILFTVFTGLYYFA 199
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P K I +++ G F + W V ++LF +Y+ F+ Y+ Y L I+ L++LY+ G+
Sbjct: 200 PNKKLLIRNVVKGAAFATVGWTVVSMLFAYYVNHFNNYTATYGSLGGIIILLIWLYLSGM 259
Query: 261 FFILGAELNASMIIYYWRK 279
++G E+NA I+Y R+
Sbjct: 260 IIVIGGEINA---IFYDRR 275
>gi|229551895|ref|ZP_04440620.1| ribonuclease BN [Lactobacillus rhamnosus LMS2-1]
gi|258539317|ref|YP_003173816.1| ribonuclease BN-like family enzyme [Lactobacillus rhamnosus Lc 705]
gi|229314739|gb|EEN80712.1| ribonuclease BN [Lactobacillus rhamnosus LMS2-1]
gi|257150993|emb|CAR89965.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus Lc 705]
Length = 334
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 135/269 (50%), Gaps = 16/269 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
AI + + A+ ++ LLS+FP I+F AN +LG ++ + A P +
Sbjct: 46 AINRISDSNIGQSAAALAYYTLLSLFPLILFVANALPYLGLK--YSSLATYLTQAVPANV 103
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +L + GL I A+A + +S GV L++ N+ Y V +++ I RL+
Sbjct: 104 MEWLDPIIANLLDSSSGGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQNFIIQRLL 163
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL------LIIWNG-RIYATML 187
S +L + TL+I V AI +A A+ R+F L LL L +N R T+
Sbjct: 164 S----MLMTFTLII---VMGAILIAFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITVT 216
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALFI ++F+ FLP K K+ ++LPG FT I W++ A F+ Y+ F T Y + +
Sbjct: 217 ALFIIIMFLDYFLPNVKIKMWTVLPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIGT 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++L + + GA +NA Y+
Sbjct: 277 FIAIMLWLNFSALVLLWGAVINALTAEYF 305
>gi|239626306|ref|ZP_04669337.1| ribonuclease BN [Clostridiales bacterium 1_7_47_FAA]
gi|239516452|gb|EEQ56318.1| ribonuclease BN [Clostridiales bacterium 1_7_47FAA]
Length = 278
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 136/271 (50%), Gaps = 20/271 (7%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV-----IDVVFGAWP 71
+ + E++ A+ +S +LSV PFI+ L A Q +P++ ++++ G P
Sbjct: 15 DKYAEDEMTVYAAQVSFFIILSVVPFIML------LLTAVQMIPSISNAQFMELIVGLVP 68
Query: 72 EVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
V K + ++ L++ + + +++A+ A + + G+ ++ LNR + E R + +
Sbjct: 69 -VDYKSLAFRVVNDLSLKSPATMISVTAITALWSAGRGMFSVARGLNRVHGHGEKRWYVV 127
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RLI GY ++ + ++ + V + A++ FP + +++ I N R ++ L
Sbjct: 128 GRLICSGYTIVFILVCILSLGLLVFGNMIQAFMVNRFPIVADVVTHIINFRALWALMILI 187
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI--VTFSTYSTMYAGLASI 248
+ + ++ F+P K K+ +PG +F+ + W+ + F+ Y + YS MY L +I
Sbjct: 188 MFFLGIYTFVPDKKLKLQDQIPGAVFSTVGWMAFSFAFSLYFNHIGGRNYSYMYGSLTAI 247
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L++LYM GAE+N YYW++
Sbjct: 248 VLLLLWLYMCMCILFFGAEIN-----YYWKE 273
>gi|294497189|ref|YP_003560889.1| YihY family protein [Bacillus megaterium QM B1551]
gi|294347126|gb|ADE67455.1| YihY family protein [Bacillus megaterium QM B1551]
Length = 279
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 130/259 (50%), Gaps = 15/259 (5%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
++++ ++ LLS+FPF++F L GFL ++D+V P+ I + +
Sbjct: 27 SLSAELAYYLLLSLFPFLIFLITLIGFLPLES--TDLLDLVENVAPQQTLHMIESNVSHI 84
Query: 86 LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR----LISFGYVLL 141
+ + L + +A + +SNG+ A+ + NRAY V E R + + R L++F + +
Sbjct: 85 IGSHNEKLLSFGIIATMWSASNGINAIVRAFNRAYHVQENRPFLVARGMAVLLTFAMIFV 144
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFVHLFL 200
V L++ F + I L L+ F L +W+ R + L LF ++ F
Sbjct: 145 IIVALLLPVFGHM-IGLYLSSTFGF----SETFLALWSASRWIISGLILFTVFTGLYYFA 199
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P K I +++ G F + W V ++LF +Y+ F+ Y+ Y L I+ L++LY+ G+
Sbjct: 200 PNKKLLIRNVVKGAAFATVGWTVVSMLFAYYVNHFNNYTATYGSLGGIIILLIWLYLSGM 259
Query: 261 FFILGAELNASMIIYYWRK 279
++G E+NA I+Y R+
Sbjct: 260 IIVIGGEINA---IFYDRR 275
>gi|327480116|gb|AEA83426.1| ribonuclease BN, putative [Pseudomonas stutzeri DSM 4166]
Length = 291
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 128/263 (48%), Gaps = 3/263 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ ++ F +D AS ++ L ++FPF+VF L GFL F +
Sbjct: 12 FTLLKRTLKEFSSDDMSTYASALAYRGLFAMFPFLVFLIALLGFLDLQNFFDWLRMQAEL 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A P V + I I Q+ A GL + L A + +S G +L +LNRAY V E R
Sbjct: 72 ALPPVAMEQINPVIDQLQEQQA-GLLSFGILVALWTASIGFRSLMNALNRAYDVEEGRPT 130
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +++ Y +V L+ + + V P A+ ++ + L++++W + ++
Sbjct: 131 WKLIILALAYTAGVAVLLLFTAGLMVIGPQAMEWLAGQV-GMRELVVVLWTWLRWPVIVL 189
Query: 189 LFIGLIFVHLFL-PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ + ++ P + + I PG + + W++ +V F Y+ F+ Y+ Y + +
Sbjct: 190 MLMLVVALLYYVAPDVEQEFRFITPGSVLAVLVWILASVAFGVYVQNFADYNATYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNA 270
I+ L++LY+ + GAELNA
Sbjct: 250 IIVLLLYLYISAAVLLFGAELNA 272
>gi|323489804|ref|ZP_08095029.1| transport protein [Planococcus donghaensis MPA1U2]
gi|323396542|gb|EGA89363.1| transport protein [Planococcus donghaensis MPA1U2]
Length = 299
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 127/265 (47%), Gaps = 20/265 (7%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-----FVPTVIDVVFGAWP 71
+ + D + + ++ LLS+FP ++F L +L + F+ V+ P
Sbjct: 34 QRIKDVDVPGLGAQLAFFFLLSIFPLLIFLVTLLPYLALSRGEIFSFLEEVV-------P 86
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I +++VL GL + LA + +S G+ AL SLN +Y+V E R +
Sbjct: 87 GTVYVLIESTVIEVLTTQNTGLLSFGILATIWSASLGMNALIKSLNLSYKVAENRPILLA 146
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF---FPALGNLLLIIWNG-RIYATML 187
R +S ++ +V L+ + V +A+P+ + + F L L++WN R +
Sbjct: 147 RAMS----IILTVLLIFILIVALALPIFGEQLGRLIFSFLGLEANFLVVWNSVRFTIPAI 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ ++ P + I+S+L G F W++ + LF+ Y+ F +S Y + +
Sbjct: 203 VIFVACAIIYWLAPNVRLNILSVLVGAAFAATGWLLTSYLFSIYVKNFGNFSATYGSIGA 262
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ +++LY+ + ++G ++NA M
Sbjct: 263 IIVLMLWLYVSAMILVIGGQINAVM 287
>gi|70731937|ref|YP_261679.1| ribonuclease BN [Pseudomonas fluorescens Pf-5]
gi|68346236|gb|AAY93842.1| ribonuclease BN, putative [Pseudomonas fluorescens Pf-5]
Length = 316
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 129/261 (49%), Gaps = 13/261 (4%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-----VPTVIDVVFGAW 70
+ F+ ++ AS ++ L S+FPFI+F L GFL F + + + + A
Sbjct: 19 VNEFIADEMSTYASALAYQMLFSLFPFILFLIALIGFLHLPDFFTWLRLQSELVLPHEAL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+V P+ D++ Q GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 79 EQV--NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWK 132
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLAL 189
+S Y + + L+ + + V P +A++ L + ++ +W R +L +
Sbjct: 133 RFPLSVFYTVGIAGMLLAAAALMVLGPQVMAWLAGQV-GLEDFIVTLWTILRWPVIVLLM 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P + K I PG + + W+V ++ F +Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALMYYVMPDVQQKFRFITPGSVLAVVVWIVASLGFAYYVKTFANYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNA 270
L++ Y+ +LGAE+NA
Sbjct: 252 VLLLYFYISAAVLLLGAEMNA 272
>gi|167765672|ref|ZP_02437725.1| hypothetical protein CLOSS21_00160 [Clostridium sp. SS2/1]
gi|167712647|gb|EDS23226.1| hypothetical protein CLOSS21_00160 [Clostridium sp. SS2/1]
gi|291559907|emb|CBL38707.1| Predicted membrane protein [butyrate-producing bacterium SSC/2]
Length = 289
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFG 68
+I I+ ++ A ++ + +LS FPF++ +L + P +I++V
Sbjct: 6 SMIGSVIDKAQKDHVTAFSAQAAFFTILSFFPFMIVLLSLTRYF---PITPNDMIELVRT 62
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + I + +I+ L + +S G+ +L LN + + E R++
Sbjct: 63 YLPPKYSGMVVPIIRSLNGKLTTTYMSITILTLLWSASKGILSLMTGLNTIHEISEKRNY 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ R IS Y+ L ++ ++ + + L + +F P L N + R +
Sbjct: 123 FVLRFISSIYIGLFAIAVLFGLILLLFGNSLLIQLYRFEPVLENKHVFFATIRFFLAFFT 182
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ I ++ FLP+ K ILPG F+ +W V + F+ Y FS +STMY GL SI
Sbjct: 183 FMVVFIIMYRFLPSENFKTKQILPGAFFSSAAWFVLSFFFSMYFDNFSFFSTMYGGLTSI 242
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ L +LY + +GAE+N I KKP
Sbjct: 243 LLTLFWLYFCMMMLFIGAEIN-HYFISQSSKKP 274
>gi|99034616|ref|ZP_01314573.1| hypothetical protein Wendoof_01000616 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 256
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 30/259 (11%)
Query: 22 EDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQFVPTVIDVVF--GAWPEVIA 75
DG A ++S LLS+FPF++ + A FL + I VF P+ I
Sbjct: 7 NDGVEHAGYLSFLILLSIFPFLIVLMAVASTFANFLDQYN-----IGWVFIIDNMPQDIL 61
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I ++++ P + L T++ + A + +S+ +E LR LN+AY+V + + R++S
Sbjct: 62 SSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKAYKVPVSPPYILRRVLS 121
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML----ALFI 191
I+ F+ + + + L V F + L+ + G Y L LF
Sbjct: 122 ------------ILQFLVITLIITLTIV--FSTLVPMLIDFSYQGLSYTRYLLIEFVLFT 167
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASIMT 250
+ +++ LP K + + PG I W + A F Y+ +F +Y L ++
Sbjct: 168 VVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQLDLIYGSLGGVVV 227
Query: 251 CLVFLYMLGVFFILGAELN 269
L+F YML + FI GA+ N
Sbjct: 228 SLLFFYMLSLIFIYGAKFN 246
>gi|229083712|ref|ZP_04216033.1| YihY [Bacillus cereus Rock3-44]
gi|228699570|gb|EEL52234.1| YihY [Bacillus cereus Rock3-44]
Length = 207
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR +S VL
Sbjct: 2 NVDSVVNKQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSYITTRALSI--VL 59
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLLIIWN-GRIYATMLALFIGLIFVH 197
S+ +I+ F + F ALG +W+ R+ A+ L LF F++
Sbjct: 60 TLSIIFMIV-FALIVPVFGQVIGAAVFKALGLSESFSFVWSITRLVASFLVLFALFSFLY 118
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F P K + ++ G +F I W+V + F Y+ F+ Y+ Y GL I+ +++ Y+
Sbjct: 119 TFAPDRKLRRKEVVSGALFATIGWIVVSYSFAFYVDKFANYANTYGGLGGIIILMLWFYL 178
Query: 258 LGVFFILGAELNASMIIYYWRKKP 281
+LG E+N ++Y +R
Sbjct: 179 TAWVILLGGEING--LLYSYRASD 200
>gi|317497559|ref|ZP_07955877.1| ribonuclease BN-like family protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895118|gb|EFV17282.1| ribonuclease BN-like family protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 289
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFG 68
+I I+ ++ A ++ + +LS FPF++ +L + P +I++V
Sbjct: 6 SMIGSVIDKAQKDHVTAFSAQAAFFTILSFFPFMIVLLSLTRYF---PITPNDMIELVRT 62
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + I + +I+ L + +S G+ +L LN + + E R++
Sbjct: 63 YLPPKYSGMVVPIIRSLNGKLTTTYMSITILTLLWSASKGILSLMTGLNTIHEIPEKRNY 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ R IS Y+ L ++ ++ + + L + +F P L N + R +
Sbjct: 123 FVLRFISSIYIGLFAIAVLFGLILLLFGNSLLIQLYRFEPVLENKHVFFATIRFFLAFFT 182
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ I ++ FLP+ K ILPG F+ +W V + F+ Y FS +STMY GL SI
Sbjct: 183 FMVVFIIMYRFLPSENFKTKQILPGAFFSSAAWFVLSFFFSMYFDNFSFFSTMYGGLTSI 242
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ L +LY + +GAE+N I KKP
Sbjct: 243 LLTLFWLYFCMMMLFIGAEIN-HYFISQSSKKP 274
>gi|312886962|ref|ZP_07746566.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
gi|311300274|gb|EFQ77339.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
Length = 329
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 15/264 (5%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ +E AS ++ + LL++FP +F L ++ F T+++++ P
Sbjct: 43 QELKQESLANKASSLAYTFLLAIFPGTIFLFTLIPYIPIKSFQDTLLNIIELILPSNAYA 102
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I ++ GL + L+A +F++NGV L + N++ +VE R+W R I+
Sbjct: 103 AFESTIEDIVKNQHGGLLSFGFLSAMFFATNGVHKLMRAFNKSSLIVETRTWLKRRWIAL 162
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA-------- 188
+L S +L FV + I Y+ F N W IY M++
Sbjct: 163 VLTMLISFSL----FVAILIMTISQYIISFIQFQLNTGGKFW---IYLVMISRWLIVIVL 215
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F+ + ++ + PA K + + PG I V+ ++ FT YI FS+Y+ +Y L ++
Sbjct: 216 FFVTVSILYRYGPAHKRRWKFLSPGSILATCLAVLTSLGFTFYINHFSSYNKLYGSLGTL 275
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ +++LY+ + ++G ELNAS+
Sbjct: 276 IVIMLWLYLNSLIILIGFELNASI 299
>gi|153005865|ref|YP_001380190.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
gi|152029438|gb|ABS27206.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
Length = 359
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 24/263 (9%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
E ++ +A+ ++ +LS+FPF++F LA + +++ + P + +
Sbjct: 12 EELSKDQVTDIAATVTYYGVLSLFPFVLFLVALASVVIEPSDAERMVEELGQVAPGAVTQ 71
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I D I Q+ A L A+AA + +S GV A+ +LN AY V E R ++ R I+
Sbjct: 72 IIGDRIRQLGAEQNVSLLGFGAVAALWAASGGVTAVMRALNTAYDVKEGRPFWKVRGIAI 131
Query: 137 GYVLLASV---------TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
LLA + PL A P G +++++W
Sbjct: 132 LMTLLAGALGLIAALVAIAAAPLAEAIGGPLGTAITWLRLPVAGLVMMLLW--------- 182
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
V+ LP + + I PG +F + WV+ + F+ Y+ +F +Y Y LA
Sbjct: 183 ------ALVYYVLPDVEQRFRFITPGSVFGVLVWVLASWGFSRYVTSFGSYDKTYGSLAG 236
Query: 248 IMTCLVFLYMLGVFFILGAELNA 270
++ L+++++ + ++GAE+NA
Sbjct: 237 VIVLLLWMWITSLVLLVGAEVNA 259
>gi|255523128|ref|ZP_05390100.1| ribonuclease BN [Clostridium carboxidivorans P7]
gi|255513243|gb|EET89511.1| ribonuclease BN [Clostridium carboxidivorans P7]
Length = 275
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 127/263 (48%), Gaps = 10/263 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D I F +D A+ S ++ + +LS FPFI+F L G + ++ + P
Sbjct: 7 DLIYRFNNDDIPALGSQLAYNLVLSFFPFIIFLMTLIGHTSLNN--NEILLALSKIMPAS 64
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I+ + +V+ L + S + + +S+G + LN+AY V E RS+ R+
Sbjct: 65 AFNLISTTVSEVITTKHSQLMSFSLILTIWSASSGFTGIIKGLNKAYGVPESRSFIKVRI 124
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY----ATMLAL 189
IS + + ++IM F+ + + Y + + + L+I+W Y +T + +
Sbjct: 125 ISILCTIGMAFIILIMMFLLILGHIIWKYT-AYKLSFAHRLIILWTLTRYFIFISTAVFI 183
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F L + + P + + +LPG +F + ++ + F +Y+ F+ YS +Y + +I+
Sbjct: 184 FTSL---YRYAPCKRLTWLEVLPGSLFAILHLILVSTGFAYYVNNFANYSVIYGSIGAII 240
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L +L+++ + ILG E NAS+
Sbjct: 241 VLLTWLFLISIIVILGGEFNASL 263
>gi|269958836|ref|YP_003328624.1| putative ribonuclease [Anaplasma centrale str. Israel]
gi|269848666|gb|ACZ49310.1| putative ribonuclease [Anaplasma centrale str. Israel]
Length = 286
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 132/261 (50%), Gaps = 14/261 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQ-FVPTVIDVVFGA 69
AI F DG + ++S LLS FPF+VF + L H+ F+ ++ +
Sbjct: 27 AIADFRRHDGLVYSGYLSFIFLLSTFPFLVFFTAMTSTALNVLDKHEDFLQGLVTSLLSE 86
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV +
Sbjct: 87 LPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRVSAPPPYI 146
Query: 130 ITRLISFGYVLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R++S LA V +++ S +F V +P+ L + + LG + I+ + +
Sbjct: 147 LGRMLSI-LQFLAIVLVMMCSVLFTVLVPIILDILDPKWGYLGYIKYIV-------SEVI 198
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + F++ +P + ++ +LPG + + W + + F+ Y+ F TMY L+ I
Sbjct: 199 LCLSVAFMYYMVPNTRQRMGVVLPGAVVVTVLWSLSSFTFSWYLSNFRVLHTMYGNLSGI 258
Query: 249 MTCLVFLYMLGVFFILGAELN 269
+ ++F Y++ +FFI GAEL+
Sbjct: 259 VASMLFFYIISIFFIYGAELS 279
>gi|199598315|ref|ZP_03211735.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus HN001]
gi|199590768|gb|EDY98854.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus HN001]
Length = 334
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 16/269 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
AI + + A+ ++ LLS+FP I+F AN +LG ++ + A P +
Sbjct: 46 AINRISDSNIGQSAAALAYYTLLSLFPLILFVANALPYLGLK--YSSLATYLTQAVPANV 103
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +L + GL I A+A + +S GV L++ N+ Y V +++ I RL+
Sbjct: 104 MEWLDPIIANLLDSSSGGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQNFIIQRLL 163
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL------LIIWNG-RIYATML 187
S +L + TL+I V AI + A+ R+F L LL L +N R T+
Sbjct: 164 S----MLMTFTLII---VMGAILIVFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITVT 216
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALF+ ++F+ FLP K K+ ++LPG FT I W++ A F+ Y+ F T Y + +
Sbjct: 217 ALFVIIMFLDYFLPNVKIKMWTVLPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIGT 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++L + + GA +NA Y+
Sbjct: 277 FIAIMLWLNFSALVLLWGAVINALTAEYF 305
>gi|288553956|ref|YP_003425891.1| hypothetical protein BpOF4_04675 [Bacillus pseudofirmus OF4]
gi|288545116|gb|ADC48999.1| hypothetical protein BpOF4_04675 [Bacillus pseudofirmus OF4]
Length = 276
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 17/252 (6%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+LS+FP ++F L + + + V +++ P +A + IL+V++ P GL +
Sbjct: 31 MLSIFPLLIFMIALLPYFQLN--IDQVYQILYDYVPSDLADLFGNTILEVISHPQGGLVS 88
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+AA + +SNGV AL ++NRAY + E R++ LL+ + + M FV V
Sbjct: 89 FGVIAAMWSASNGVNALIRAVNRAYGIEETRNFLSL-------RLLSILLTLCMIFVVVT 141
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG-------LIFVHLFLPAAKSKIM 208
L + + + L + + +L IG L+F++ P K K
Sbjct: 142 TLLLPVFGKLIINGMEYLFAVPPETAEFLNVLRWIIGIGLMTLVLMFLYWAAPNVKLKFK 201
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ G + I W + ++LF++Y+ F YS Y L ++ +++ ++ G+ I+G E+
Sbjct: 202 QVIIGALSATIGWQIISLLFSYYVTNFGNYSATYGSLGGVIILMLWFFLTGLIIIVGGEI 261
Query: 269 NASMIIYYWRKK 280
NA+ I + R K
Sbjct: 262 NAT-IFHQKRAK 272
>gi|85375509|ref|YP_459571.1| hypothetical protein ELI_13410 [Erythrobacter litoralis HTCC2594]
gi|84788592|gb|ABC64774.1| conserved hypothetical membrane protein [Erythrobacter litoralis
HTCC2594]
Length = 339
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 29/268 (10%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK---PI 78
DG+ A +++ A+L++FPF + GA + +G I+ V A P +A P+
Sbjct: 54 NDGFIHAGNLAYMAVLAIFPFFITGAAIFSVIGEESDRAATINAVLLALPPSVANTIGPV 113
Query: 79 TDEILQVLA------VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
E+++ + A GL+T+S+L +E +R L RAY + +++ R
Sbjct: 114 AREVIEARSGWLLWVGGAVGLWTVSSL---------IETIRDILRRAYGTEAVLAFWRYR 164
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+S G ++ A V L++ V I A +++ + P L ++L G + + + IG
Sbjct: 165 LLSTGIIIAAVVLLMLSLIAQVMIGAAQEFIQAYVPQLIDML-----GELQISRIIPAIG 219
Query: 193 L------IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +F L +S+ PG + T + WV V + F Y Y L+
Sbjct: 220 LFGSIYFLFYALTPHVYRSRRYPKWPGALATTVWWVGVTVALPPILRNFFAYDLTYGALS 279
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
IM L F +++G+ ++GAELNA++ +
Sbjct: 280 GIMIALFFFWLVGLGVVIGAELNAALAV 307
>gi|239638059|ref|ZP_04679018.1| transporter [Staphylococcus warneri L37603]
gi|239596342|gb|EEQ78880.1| transporter [Staphylococcus warneri L37603]
Length = 411
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 129/254 (50%), Gaps = 11/254 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++D +A+ ++ +L++FP ++F L F Q + I + + P + I
Sbjct: 82 KDDASGLAAQMTYHFVLAMFPMLIFLLTLLPFFNIEQ---SQITNMLSSAPSETSSIIKG 138
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I V + GL ++ + A + +SNG+ A+ S N AY V + R+ + +L+S + +
Sbjct: 139 VIGDVTKNSSGGLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGILLKLLSVVFTV 198
Query: 141 LASVTLVIMSFVFVAIP-LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI-FVHL 198
+ V I +A+P L A F LG + W + +L L I L+ F+ L
Sbjct: 199 VMGVVFAIA----MALPTLGSAISHYLFGPLGLDSEVKWVFNLIRVVLPLIIILVLFIVL 254
Query: 199 F--LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P K+KI+S+LPG IFT I W++G+ F YI F YS Y +A I+ L++LY
Sbjct: 255 YSVAPNVKTKILSVLPGAIFTSIIWLLGSFAFGWYISNFGNYSKTYGSIAGIIILLIWLY 314
Query: 257 MLGVFFILGAELNA 270
+ I+GAE+NA
Sbjct: 315 LTSFIIIIGAEINA 328
>gi|150391950|ref|YP_001321999.1| putative ribonuclease BN [Alkaliphilus metalliredigens QYMF]
gi|149951812|gb|ABR50340.1| putative ribonuclease BN [Alkaliphilus metalliredigens QYMF]
Length = 276
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 136/283 (48%), Gaps = 16/283 (5%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + +++ F +++ A+ + IS +LS FPF++F L G++ + T+ +
Sbjct: 3 FRRIKEVLLHLYNQFDKDEVPALGAQISYYLILSFFPFLIFLIVLIGYIPLTE-ERTLYE 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P + + IL++ L + L + +S G A+ +N+AY V E
Sbjct: 62 LAL-ILPHDAYSLVEEIILEITTADNTTLISFGMLGTLWTASRGTSAMIRGMNKAYNVKE 120
Query: 125 MRS-WYITRL-----ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
R W + + I +++L S+TL++ + L + + L LL W
Sbjct: 121 DRPFWKVAGMGVIFTIGLAFMILFSLTLLVFGQL-----LGEMLINQL--NLSTLLEPTW 173
Query: 179 NGRIYA-TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
Y +LALF ++LF P K+ +I G +F+ + WVV ++ F +Y+ F
Sbjct: 174 RLVRYGVALLALFSTFTLLYLFGPNYHLKLKNIYWGALFSTVGWVVISLGFAYYVNNFGN 233
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y+ +Y + +M L++LY+ + ++GAE+N+++ ++ R K
Sbjct: 234 YTRVYGSIGGVMILLIWLYLSSLIVLMGAEVNSTIWVFSKRGK 276
>gi|330685613|gb|EGG97259.1| YihY family protein [Staphylococcus epidermidis VCU121]
Length = 411
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 129/254 (50%), Gaps = 11/254 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++D +A+ ++ +L++FP ++F L F Q + I + + P + I
Sbjct: 82 KDDASGLAAQMTYHFVLAMFPMLIFLLTLLPFFNIEQ---SQITSMLSSAPSETSSIIKG 138
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I V + GL ++ + A + +SNG+ A+ S N AY V + R+ + +L+S + +
Sbjct: 139 VIGDVTKNSSGGLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGILLKLLSVVFTV 198
Query: 141 LASVTLVIMSFVFVAIP-LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI-FVHL 198
+ V I +A+P L A F LG + W + +L L I L+ F+ L
Sbjct: 199 VMGVVFAIA----MALPTLGSAISHYLFGPLGLDSEVKWVFNLIRVVLPLIIILVLFIVL 254
Query: 199 F--LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P K+KI+S+LPG IFT I W++G+ F YI F YS Y +A I+ L++LY
Sbjct: 255 YSVAPNVKTKILSVLPGAIFTSIIWLLGSFAFGWYISNFGNYSKTYGSIAGIIILLIWLY 314
Query: 257 MLGVFFILGAELNA 270
+ I+GAE+NA
Sbjct: 315 LTSFIIIIGAEINA 328
>gi|225181231|ref|ZP_03734676.1| ribonuclease BN [Dethiobacter alkaliphilus AHT 1]
gi|225168011|gb|EEG76817.1| ribonuclease BN [Dethiobacter alkaliphilus AHT 1]
Length = 281
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 14/258 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
E + A + +S +LS+FPF++F L + Q +D + P+ +
Sbjct: 17 ENETTARGAQLSYFFILSIFPFLIFLITLIDYTPLSQ--QHTLDQLALLLPDNAFAIVEQ 74
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ +V A L ++ L + +S G AL SLN+AY + E RS+++ I L
Sbjct: 75 IVSEVEAADNFTLLSLGILGTIWTASRGTAALIKSLNKAYDITESRSFFVLNTIGIAATL 134
Query: 141 LASVTLVI----MSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
++ ++ + F V LA Y+ F AL +L R +L +F+
Sbjct: 135 ALALLILFTLSFLVFGQVIGELAFQYLGLEGLFQALWPVL------RFSIPLLIIFVSFT 188
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ L+ P + ++ + PG IF+ ++W++ + F Y+ F +S Y + I+ +++
Sbjct: 189 LLFLYSPNCRLRLRHVYPGAIFSTLAWIIASQAFAFYVNNFGNFSRTYGSIGGIIVFMIW 248
Query: 255 LYMLGVFFILGAELNASM 272
LY+ V +LG E+NA++
Sbjct: 249 LYLSSVVVLLGGEINATL 266
>gi|295704377|ref|YP_003597452.1| putative ribonuclease BN [Bacillus megaterium DSM 319]
gi|294802036|gb|ADF39102.1| putative Ribonuclease BN [Bacillus megaterium DSM 319]
Length = 282
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 129/269 (47%), Gaps = 17/269 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ E+ +A+ + +LS+FP ++ ++ +L IDV+ P A
Sbjct: 13 KEIQEDQATGLAAEQAYYYMLSLFPMLILLISIVPYLSIKP--EEAIDVLQSVMPGETAA 70
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
D ++Q ++ P GL T+ L + +SNG+ A ++N+AY V E RS+ R
Sbjct: 71 IFKDNVVQFVSQPNGGLLTVGILGTIWSASNGMNAFIRAMNQAYDVKEQRSFIKVR---- 126
Query: 137 GYVLLASVTLVIMSFVFVAIP----LALAYVRKFF--PALGNLLLIIWNGRIYATMLALF 190
G +L ++ L++ V + +P + L ++ ++F P+ ++L + I ++ L
Sbjct: 127 GLSILLTIGLIVTIVVSLLLPVFGGVLLNWISEWFSLPSGTTVILNVLRWIIGVGIMVLV 186
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ +++ P + PG + + W + ++ F+ Y+ F YS Y L ++
Sbjct: 187 LSVLY--RLAPNKTFPFAHVWPGALAATLLWQLTSLGFSFYVSNFGNYSATYGSLGGVIV 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++L++ G+ ++G E+NA IY+ K
Sbjct: 245 LMLWLFLTGLILVIGGEINA---IYHRNK 270
>gi|89097332|ref|ZP_01170222.1| transporter [Bacillus sp. NRRL B-14911]
gi|89088155|gb|EAR67266.1| transporter [Bacillus sp. NRRL B-14911]
Length = 277
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 8/195 (4%)
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ L +A + L ++ + + +SNG+ A+ + N AY V E R + R G
Sbjct: 77 ESNLNQIADRSGTLLSVGIIGTIWSASNGIHAIVKAFNLAYEVKESRPLIVAR----GMA 132
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKF-FPA--LGNLLLIIWNG-RIYATMLALFIGLIF 195
+L + ++ + V + +P+ + F F A L + L WN R +++ LFI +
Sbjct: 133 ILLTFAMIFVFVVALLLPVFGKQIGVFLFSAFDLSSEFLSAWNALRWLVSIVILFIVFLV 192
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ P K K +S LPG IF W++ ++ F++Y+ F+ Y+ Y + +I+ +V+
Sbjct: 193 LYWIAPNVKMKCISALPGAIFATAGWILASLAFSYYVGNFANYTAAYGSIGAIIVLMVWF 252
Query: 256 YMLGVFFILGAELNA 270
Y+ GV ILG E+NA
Sbjct: 253 YLTGVIIILGGEVNA 267
>gi|222055690|ref|YP_002538052.1| ribonuclease BN [Geobacter sp. FRC-32]
gi|221564979|gb|ACM20951.1| ribonuclease BN [Geobacter sp. FRC-32]
Length = 308
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + D + + GL ++ + A + SSN + ++ +NR Y+V E R ++
Sbjct: 78 PEQAFSLVQDNVKSLFGNKQGGLLSLGFVLALWTSSNAITSIMDIMNRLYQVQEGRPFWK 137
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY-ATMLAL 189
RL + V + SV L I+S V + L LG+ I+WN I AT+ L
Sbjct: 138 VRLTAIALVTVLSV-LFILSLVLLMFGPKLGSFIAGITHLGHFFEILWNILIAPATLFML 196
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ F P + I PG + WV+ ++ F+ Y+ F +Y+ Y + +++
Sbjct: 197 MLAIAIIYYFTPDVEQNWKWISPGAVIAIPVWVLASLAFSFYVNNFGSYNKTYGSIGAVI 256
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L +LY+ G + GAE+N+++
Sbjct: 257 ILLFWLYISGFIILAGAEINSAV 279
>gi|160935740|ref|ZP_02083115.1| hypothetical protein CLOBOL_00630 [Clostridium bolteae ATCC
BAA-613]
gi|158441484|gb|EDP19194.1| hypothetical protein CLOBOL_00630 [Clostridium bolteae ATCC
BAA-613]
Length = 279
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 132/271 (48%), Gaps = 20/271 (7%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV-----IDVVFGAWP 71
+ F E++ A+ +S +LSV PFI+ L A Q +P++ ++++ G P
Sbjct: 13 DKFAEDEMTVYAAQVSFFIILSVVPFIML------LLTAVQMIPSISNARFMELIVGLVP 66
Query: 72 EVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
V K + ++ L++ + + +++A+ A + + G+ ++ LNR E R + I
Sbjct: 67 -VDYKSLAFRVVNDLSLKSPATMISVTAVTALWSAGRGMFSVARGLNRVNGHGEKRWYVI 125
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RLI GY ++ + ++ + V + A++ FP + ++ I N R ++ L
Sbjct: 126 NRLICSGYTIVFILVCILSLGLLVFGNMIQAFMVSRFPIIADVTTHIINFRALWALMILI 185
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI--VTFSTYSTMYAGLASI 248
I + ++ F+P K+ LPG +F+ + W+ + F+ Y + YS MY L +I
Sbjct: 186 IFFLGIYTFVPDKSLKLRDQLPGAVFSTVGWMAFSFAFSLYFSHIGGKNYSYMYGSLTAI 245
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L++LY GAE+N Y+W++
Sbjct: 246 VLLLLWLYFCMCILFFGAEIN-----YFWKE 271
>gi|241889551|ref|ZP_04776849.1| ribonuclease BN [Gemella haemolysans ATCC 10379]
gi|241863173|gb|EER67557.1| ribonuclease BN [Gemella haemolysans ATCC 10379]
Length = 300
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 131/252 (51%), Gaps = 18/252 (7%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+++++S +LS+FP ++ L + Q +++ + P + + D I +VL
Sbjct: 40 LSANLSYYFILSLFPMLIVALALTPYFKIDQ--QFLLEKIQNYAPGDLGNYLFDMISEVL 97
Query: 87 AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
+ T+ + + +S+G+ + I+ N A+RV + R W +T++IS V+L ++ L
Sbjct: 98 NNKNNTIITVGIVFTLWSASSGIYGIIIAFNNAFRVRDGRIWIVTKIIS---VILTALFL 154
Query: 147 VIMSFVFVAIPL-----ALAYV--RKFFPALGNLLLIIWNGRIYA-TMLALFIGLIFVHL 198
V M F+A+ L L Y+ KF L +W+ Y +L +F +F++
Sbjct: 155 VGM---FLALALIVFGKQLTYILFHKF--NLDQGFYNLWSVINYTLPLLFIFFVFVFLYT 209
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
P K K +SILPG +F +SW + + LF +YI FS+Y Y + + M +++LY+
Sbjct: 210 MGPNLKLKAISILPGALFATLSWTIVSRLFGYYIDHFSSYIKTYGTIGAFMAFILWLYIT 269
Query: 259 GVFFILGAELNA 270
G I+GAE+NA
Sbjct: 270 GYILIIGAEINA 281
>gi|330807955|ref|YP_004352417.1| ribonuclease, ribonuclease_BN-like family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376063|gb|AEA67413.1| putative ribonuclease, Ribonuclease_BN-like family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 316
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 125/264 (47%), Gaps = 9/264 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF---VPTVIDVVF 67
++ + F++++ AS ++ L S+FPFI+F L GFL F + ++V
Sbjct: 14 VMMRTVTEFLDDEMSTYASALAYQMLFSLFPFILFLIALIGFLHLPDFFSWLRLQSELVL 73
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ D++ Q GL ++ + A + +S GV + ++N AY VVE R
Sbjct: 74 PPQALEQVNPVIDQLQQS----KGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVVEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATM 186
+ +S Y + + L+ + + V P + ++ L ++ +W R +
Sbjct: 130 AWKRFPLSIFYTIGIAGMLLAAAALMVLGPQVMGWIAAQV-GLETFIVTLWTIVRWPVIV 188
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY +
Sbjct: 189 FLLMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLGFAFYVKTFADYNAMYGSIG 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+I+ L++ Y+ +LGAE+NA
Sbjct: 249 AIIVLLLYFYISSAVLLLGAEMNA 272
>gi|283796441|ref|ZP_06345594.1| YihY family protein [Clostridium sp. M62/1]
gi|291075850|gb|EFE13214.1| YihY family protein [Clostridium sp. M62/1]
gi|295091415|emb|CBK77522.1| Predicted membrane protein [Clostridium cf. saccharolyticum K10]
Length = 279
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 134/292 (45%), Gaps = 29/292 (9%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
YF + IYD FV+++ A+ S +LS PFI+ L QFVP V
Sbjct: 3 YFLVHCKQIYD---KFVKDEITVYAAQASFFIVLSSVPFIIL------LLTVLQFVPAVQ 53
Query: 64 DVVF----GAWPEVIAKP----ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
F + +P I DEI + + +I+ L +A S G+ +
Sbjct: 54 QSDFLYLLSRLLPIEVQPLVYTIVDEIYSKSSAALLSVSSITTLWSA---SRGMLGIEKG 110
Query: 116 LNRAYRVVEMRSWYITRLISFGY--VLLASVTLVIMSFVFVAIPLALAY-VRKFFPALGN 172
LNR R + I+R+I+ GY V +A L ++ VF + L + + F L
Sbjct: 111 LNRIAGSPRRRGYVISRIINSGYTIVFMAVCILSLILLVFGTVIQNLIFKILPFLQGLSP 170
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L+ + + ++A F+GL + FLP + ++ LPG +F+ + W++ + + Y
Sbjct: 171 YLISLRSMLALVILVAFFMGL---YTFLPYERQRLRCQLPGAVFSTLCWILFSYASSLYF 227
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII---YYWRKKP 281
FS++STMY LAS+ +++LY LGAE+N + Y + ++P
Sbjct: 228 KYFSSFSTMYGSLASLAVLMLWLYFCICILFLGAEINCHLTALGRYRFCRRP 279
>gi|225025891|ref|ZP_03715083.1| hypothetical protein EUBHAL_00119 [Eubacterium hallii DSM 3353]
gi|224956788|gb|EEG37997.1| hypothetical protein EUBHAL_00119 [Eubacterium hallii DSM 3353]
Length = 325
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 131/269 (48%), Gaps = 4/269 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ +++++ D ++ ++ A + + LLS+FPF++F L ++ +
Sbjct: 4 RKRIKNLYELVMDFLKKCSDDHVGAFGAMSAFFILLSIFPFMIFLLTLTRYIPFSKDDII 63
Query: 62 VIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI ++ E + K I +EI + IS +AA + SS GV ++ I LN Y
Sbjct: 64 VILTRMISFEEGSLIKSIVNEIYRKTGTTVSA---ISIIAALWSSSRGVYSIVIGLNSVY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ E R+++ RL S Y LL ++ + +M ++V +Y + FP + +L +
Sbjct: 121 DIDENRNYFAIRLFSLVYTLLFALMISVMLVMWVFGNSLYSYFLQKFPFVVPILGYFMHK 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RI +++ L + + ++ ++P S PG + + WV +V + Y+ F+ +S
Sbjct: 181 RIIFSLIFLTLLFMIIYKWIPNRVSSFRKQFPGALIATLGWVAVSVGCSIYMDNFTNFSY 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELN 269
+Y +A IM L++LY GAE+N
Sbjct: 241 IYGSMAGIMILLLWLYFCMSMVFYGAEVN 269
>gi|239631810|ref|ZP_04674841.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|239526275|gb|EEQ65276.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 308
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
AI E + A+ ++ LLS+FP I+F AN + G + + A P +
Sbjct: 19 AINRITESNIGQSAAALAYYTLLSLFPLILFVANALPYFGLT--YKGLAAYLTQAIPSNV 76
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ I +L + GL I A+A + +S GV L++ N+ Y V +++ I RL+
Sbjct: 77 MNWLDPVIANLLDSSSGGLLGIGAVATLWAASLGVNGLKMGFNQIYGVESSQNFIIQRLL 136
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL------LIIWNG-RIYATML 187
S +L + TL+I V AI + A+ R+F L LL L +N R T+
Sbjct: 137 S----MLMTFTLII---VMGAILIVFAFGRQFLEWLIPLLRLNDDWLRTFNTLRWPVTIT 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALF+ ++F++ FLP K ++ ++LPG FT W++ A F+ Y+ F T Y + +
Sbjct: 190 ALFVIIMFLNYFLPNVKIRMWTVLPGTAFTVAGWLLIAQAFSLYMKYFGTRYLSYGTIGT 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++L + + GA +NA Y+
Sbjct: 250 FIAIMLWLNFSALVLLWGAVINALTAEYF 278
>gi|300857074|ref|YP_003782058.1| putative ribonuclease BN [Clostridium ljungdahlii DSM 13528]
gi|300437189|gb|ADK16956.1| predicted ribonuclease BN [Clostridium ljungdahlii DSM 13528]
Length = 275
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 31/276 (11%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
F+++D A+AS ++ S L S+FPF+VF +L G+ ++ ++ P+ +
Sbjct: 15 RFIQDDVLALASQLAYSLLFSIFPFLVFFISLIGYSDISS--NDILLILSNVLPKNALEL 72
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRL 133
I + +++ L +S + + S G A+ LN+AY E RS + I+ L
Sbjct: 73 IENTVIKTANSKNIELLCLSLILTLWALSGGFHAVIKGLNKAYDQRETRSIFKIYIISIL 132
Query: 134 ISFGYVLLASVTLVIMSF-----VFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATM 186
+ G L+ TL+ + F F+A L L+ + F L N+L +II+ G I
Sbjct: 133 CTLGVTLIILCTLLFLVFGQMIGSFLAFRLGLS---EGFGFLWNILRYVIIFFGTI---- 185
Query: 187 LALFIGLIF--VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
LIF V++F P + +LPG +F+ I V+ ++ F Y+ F YS +Y
Sbjct: 186 ------LIFAAVYIFTPNVRLTWRKVLPGAVFSTIGIVIASMGFAFYVNNFGNYSKIYGS 239
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++ L +L++L ILG E N+ + + R+K
Sbjct: 240 IGAVIILLTWLFILSTITILGGEFNS---VLFKREK 272
>gi|172056670|ref|YP_001813130.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
gi|171989191|gb|ACB60113.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
Length = 302
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 37 LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI 96
LS+FP I+F ++ F Q T+ + P TD I Q + P GL ++
Sbjct: 36 LSIFPGIIFVISVLSFFDIDQ--QTLESQIRDLAPGGSVNTFTDVIFQAIKEPQGGLLSV 93
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI 156
A+ A + +S GV+ L + N AY R + R I+ ++ + ++++ + V
Sbjct: 94 GAILAIWSASKGVDRLITTANHAYGDFSPRGFVAARGIALILTIVLGIGMLLLIVLNVLG 153
Query: 157 PLALAYVRKF-FP-ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
++Y+ F P +G +L+ +T+L + I IF + P +PG
Sbjct: 154 GPIISYLANFVIPIDMGQKILLTVLRYAISTVLLILILSIFYRV-APKRPITFKEAIPGA 212
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+F I W + +V F Y+ FS Y+ Y L S++ L++LY G+ +LG+ELNAS
Sbjct: 213 VFGVIVWQLLSVGFGFYVSNFSNYNQTYGSLGSVVIVLLWLYFTGLIILLGSELNASWER 272
Query: 275 YYWRKKP 281
+ + P
Sbjct: 273 FMKKADP 279
>gi|88608339|ref|YP_506282.1| YihY family protein [Neorickettsia sennetsu str. Miyayama]
gi|88600508|gb|ABD45976.1| YihY family protein [Neorickettsia sennetsu str. Miyayama]
Length = 279
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 17/279 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------ 54
M+ F ++ +Y+ + H G A ++S LLS+FPF+ F +AG+
Sbjct: 1 MKRTFAVLKISLYNMLYH----GGSEYAGYLSFLLLLSIFPFLFFFTAVAGYTANIVGAS 56
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+++ ++ V PE I + I I ++L P GL T++ L A + +S+ VE L+
Sbjct: 57 SYEITRKLLSVFIENVPENIIEGIMPYIKEILEGPTHGLLTLTILGAIWTASSIVEGLKA 116
Query: 115 SLNRAYR--VVEMRSWYI-TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
++N+AY + S YI R +S ++ + + I+ +F+ P + K L
Sbjct: 117 AVNKAYNFGTETLVSEYILRRFVS----VIQFLLISIIILIFLLFPTVYPLLTKNVSFLH 172
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
L W T +F + +++F P K K ++PG I W++ ++ F+ Y
Sbjct: 173 LLKRPSWLPYSTVTTCCIFCFVSALYIFFPKEKQKFTDVVPGSIMVVSLWILTSIAFSFY 232
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ +F+ + +Y +A I+ +++ Y+L + FI GAE+NA
Sbjct: 233 LHSFAQMNIIYGSIAGIIVVMLYFYLLNLCFIYGAEINA 271
>gi|313889055|ref|ZP_07822713.1| YihY family protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312844928|gb|EFR32331.1| YihY family protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 304
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 25/283 (8%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFV 59
++ F +IY ++H D + ++ +LS+FPF++ N F G +++
Sbjct: 11 KKAFTFFDKLIYRVLDH----DTLSYGGSLTYFLILSIFPFLISLINAINFSGILDPEYL 66
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNR 118
++DV+ G E+I L L + + G F TIS +A + +S V L +N+
Sbjct: 67 YGLLDVLPGEIQEIIR-----NFLNELHMSSSGSFLTISFVAGLFTASTAVFKLMKIINQ 121
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL--ALAYVR--KFFPALGNLL 174
+Y VE R + RL++ L ++ L++M F+ V + + YV+ +
Sbjct: 122 SYGFVESRGFLAQRLMA----LFFTLALILMIFLLVLTQIFGQIIYVKVMSYLGIENASF 177
Query: 175 LIIWNGRIYATMLA-LFIGLIFVHLFLPAAKSK----IMSILPGVIFTWISWVVGAVLFT 229
IW+ A LA + I I ++ F P+ + I S+LPG IF + ++ + F
Sbjct: 178 DKIWSIAKNAIPLAYMLITFILLYKFSPSKSRENMITIKSVLPGSIFATLGLIIASSGFN 237
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ F YS Y L I+ L++LY+L ++GAE+N+++
Sbjct: 238 FYVSNFGKYSITYGSLGGIIVFLIWLYLLSTITLVGAEINSTL 280
>gi|325103819|ref|YP_004273473.1| ribonuclease BN [Pedobacter saltans DSM 12145]
gi|324972667|gb|ADY51651.1| ribonuclease BN [Pedobacter saltans DSM 12145]
Length = 332
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 122/267 (45%), Gaps = 6/267 (2%)
Query: 12 IYDAIEHFVEEDGWA----MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+Y F +E G AS ++ + L++VFP I+F L ++ F ++ ++
Sbjct: 34 LYTVATFFFQEIGKESLVNKASSLAYNFLMAVFPAIIFLFTLIPYIPIKNFQNQLMAIIA 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE K D + ++ L +I L A +F++NG+ L + N++ +VE R+
Sbjct: 94 LLLPENAYKAFEDTLEDIVKNQNGKLLSIGFLLALFFATNGIHTLMQAFNKSSLIVETRT 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL--LLIIWNGRIYAT 185
W RL++ +L ++++ + V L R+ N + +I GR
Sbjct: 154 WLKQRLVAMNLTVLTIFSIILGVSITVITEFILNTFREELNFENNKFWIFLITIGRWIII 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ F ++ + PA K PG + ++ + FT +I F Y+ +Y +
Sbjct: 214 VCVYFFTTSLLYRYGPANAKKWKLFSPGAWLATVLAILTTLGFTFFINNFGAYNKLYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
+++ +++LY+ + ++G ELNAS+
Sbjct: 274 GTLLVVMIWLYLNSLILLIGFELNASL 300
>gi|253577946|ref|ZP_04855218.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850264|gb|EES78222.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 298
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 9/266 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V +++ +E + A A+ + ++S P I+F L ++ P +VV
Sbjct: 10 VTGLLFGFMERVSGDHVGAYATQAAYFLIMSFIPCILFLTTLV------RYTPLTYNVVR 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAK---GLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
A I + + +L ++ K + +SA+ A + + G++++ LN Y V E
Sbjct: 64 DAIVAFIPENLQSFVLGIVVDVYKRSTAIVPLSAIVALWSAGKGMQSIINGLNTIYHVKE 123
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+W +TR+ + Y L + +++ + V V ++ P LG +L I R
Sbjct: 124 TRNWLLTRIYAVFYTLSLVIAVIVSLLMLVLGNEIQKVVSRYIPFLGRVLGKILGARALL 183
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
LF+ + ++ LP K+ S +PG + ++W + + F+ Y F +S MY
Sbjct: 184 VFGVLFLVFLMLYKVLPNRKATFKSQIPGALIIAVAWSIFSYGFSFYFEIFPGFSNMYGN 243
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
LA+I+ +V+LY+ + GAE+NA
Sbjct: 244 LATIIMVMVWLYICMNLLLYGAEINA 269
>gi|116494587|ref|YP_806321.1| ribonuclease BN-like family protein [Lactobacillus casei ATCC 334]
gi|191638025|ref|YP_001987191.1| YihY family protein [Lactobacillus casei BL23]
gi|301066135|ref|YP_003788158.1| ribonuclease BN-like family enzyme [Lactobacillus casei str. Zhang]
gi|116104737|gb|ABJ69879.1| Ribonuclease BN-like family enzyme [Lactobacillus casei ATCC 334]
gi|190712327|emb|CAQ66333.1| YihY family protein [Lactobacillus casei BL23]
gi|300438542|gb|ADK18308.1| Ribonuclease BN-like family enzyme [Lactobacillus casei str. Zhang]
gi|327382107|gb|AEA53583.1| Methionine aminopeptidase Map [Lactobacillus casei LC2W]
gi|327385249|gb|AEA56723.1| Methionine aminopeptidase Map [Lactobacillus casei BD-II]
Length = 335
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
AI E + A+ ++ LLS+FP I+F AN + G + + A P +
Sbjct: 46 AINRITESNIGQSAAALAYYTLLSLFPLILFVANALPYFGLT--YKGLAAYLTQAIPSNV 103
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ I +L + GL I A+A + +S GV L++ N+ Y V +++ I RL+
Sbjct: 104 MNWLDPVIANLLDSSSGGLLGIGAVATLWAASLGVNGLKMGFNQIYGVESSQNFIIQRLL 163
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL------LIIWNG-RIYATML 187
S +L + TL+I V AI + A+ R+F L LL L +N R T+
Sbjct: 164 S----MLMTFTLII---VMGAILIVFAFGRQFLEWLIPLLRLNDDWLRTFNTLRWPVTIT 216
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALF+ ++F++ FLP K ++ ++LPG FT W++ A F+ Y+ F T Y + +
Sbjct: 217 ALFVIIMFLNYFLPNVKIRMWTVLPGTAFTVAGWLLIAQAFSLYMKYFGTRYLSYGTIGT 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++L + + GA +NA Y+
Sbjct: 277 FIAIMLWLNFSALVLLWGAVINALTAEYF 305
>gi|146281873|ref|YP_001172026.1| ribonuclease BN, putative [Pseudomonas stutzeri A1501]
gi|145570078|gb|ABP79184.1| ribonuclease BN, putative [Pseudomonas stutzeri A1501]
Length = 265
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 3/244 (1%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
AS ++ L ++FPF+VF L GFL F + A P V + I I Q L
Sbjct: 5 ASALAYRGLFAMFPFLVFLIALLGFLDLQNFFDWLRMQAELALPPVAMEQINPVIDQ-LQ 63
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
GL + L A + +S G +L +LNRAY V E R + +++ Y +V L+
Sbjct: 64 EQQAGLLSFGILVALWTASIGFRSLMNALNRAYDVEEGRPTWKLIILALAYTAGVAVLLL 123
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL-PAAKSK 206
+ + V P A+ ++ + L++++W + ++ + + ++ + ++ P + +
Sbjct: 124 FTAGLMVIGPQAMEWLAGQV-GMRELVVVLWTWLRWPVIVLMLMLVVALLYYVAPDVEQE 182
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
I PG + + W++ +V F Y+ F+ Y+ Y + +I+ L++LY+ + GA
Sbjct: 183 FRFITPGSVLAVLVWILASVAFGVYVQNFADYNATYGSIGAIIVLLLYLYISAAVLLFGA 242
Query: 267 ELNA 270
ELNA
Sbjct: 243 ELNA 246
>gi|302386605|ref|YP_003822427.1| ribonuclease BN [Clostridium saccharolyticum WM1]
gi|302197233|gb|ADL04804.1| ribonuclease BN [Clostridium saccharolyticum WM1]
Length = 278
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 23/268 (8%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
IYD + +++ A+ S ++++ FPF++ L Q +P++
Sbjct: 11 IYD---KYSKDEMTVYAAQASFFSIIAAFPFMML------LLALIQLIPSITKANLLQLI 61
Query: 72 EVIAKPITDEILQVLAVPAKGLFT--------ISALAAAYFSSNGVEALRISLNRAYRVV 123
I P T EI V+ L+T ++A AA + +S G+ ++ LNR Y
Sbjct: 62 ITII-PSTLEINSVIVTVIDDLYTNSPVAVLSVTAAAAVWSASRGMLSIERGLNRVYGHE 120
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R++++TR+I GY ++ V ++ + V ++ + FP L + + R
Sbjct: 121 KKRNYFVTRIICAGYTIVFMVICLLTLVLLVLGSSIQGFMNRHFPLLAEITQSVLTFR-- 178
Query: 184 ATMLALFIGLIF--VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
TML + F ++ ++P K + LPG F + W+ + F+ Y F YS M
Sbjct: 179 -TMLVFMLTACFAVLYTYVPEKKQEFYKQLPGAAFCTLGWIAFSFAFSIYFNNFGNYSVM 237
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELN 269
Y L +I+ ++++Y LGAE+N
Sbjct: 238 YGSLTAIVLLMLWIYSCICILFLGAEIN 265
>gi|227535434|ref|ZP_03965483.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227186917|gb|EEI66984.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 349
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
AI E + A+ ++ LLS+FP I+F AN + G + + A P +
Sbjct: 60 AINRITESNIGQSAAALAYYTLLSLFPLILFVANALPYFGLT--YKGLAAYLTQAIPSNV 117
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ I +L + GL I A+A + +S GV L++ N+ Y V +++ I RL+
Sbjct: 118 MNWLDPVIANLLDSSSGGLLGIGAVATLWAASLGVNGLKMGFNQIYGVESSQNFIIQRLL 177
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL------LIIWNG-RIYATML 187
S +L + TL+I V AI + A+ R+F L LL L +N R T+
Sbjct: 178 S----MLMTFTLII---VMGAILIVFAFGRQFLEWLIPLLRLNDDWLRTFNTLRWPVTIT 230
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALF+ ++F++ FLP K ++ ++LPG FT W++ A F+ Y+ F T Y + +
Sbjct: 231 ALFVIIMFLNYFLPNVKIRMWTVLPGTAFTVAGWLLIAQAFSLYMKYFGTRYLSYGTIGT 290
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++L + + GA +NA Y+
Sbjct: 291 FIAIMLWLNFSALVLLWGAVINALTAEYF 319
>gi|160881600|ref|YP_001560568.1| ribonuclease BN [Clostridium phytofermentans ISDg]
gi|160430266|gb|ABX43829.1| ribonuclease BN [Clostridium phytofermentans ISDg]
Length = 289
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 106/223 (47%), Gaps = 5/223 (2%)
Query: 53 LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA-----VPAKGLFTISALAAAYFSSN 107
L QF+P + V A V I ++ ++ + + +++ +A + SS
Sbjct: 45 LSIMQFLPFTENEVMNACRSVFPAAIQGFVISIITELYGKATSTAILSVTLVATLWSSSK 104
Query: 108 GVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF 167
G ++ +N Y E R++ + R+ S Y LL + +++ +FV ++ K F
Sbjct: 105 GFLSIIRGMNGVYANTETRNYIVIRIKSAIYTLLFAFMIILFLVIFVFGNQLYLWIVKRF 164
Query: 168 PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
P L L+I + R + L + +F+ + +P K+K++ LPG I W++ + L
Sbjct: 165 PVLKEFALVIISVRTIVGLCLLIVFFLFMFMVIPNRKTKLIKELPGAILASCGWMIFSYL 224
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
++ YI S YS Y L +I+ +++LY +GAE+N+
Sbjct: 225 YSFYIDNMSNYSYTYGSLTAIVLAMIWLYTCMYMMFIGAEVNS 267
>gi|294499057|ref|YP_003562757.1| putative Ribonuclease BN [Bacillus megaterium QM B1551]
gi|294348994|gb|ADE69323.1| putative Ribonuclease BN [Bacillus megaterium QM B1551]
Length = 282
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 128/269 (47%), Gaps = 17/269 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ E+ +A+ + +LS+FP ++ ++ +L ID++ P A
Sbjct: 13 KEIQEDQATGLAAEQAYYYMLSLFPMLILLISIVPYLSIKP--EEAIDLLQSVMPGETAA 70
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
D + Q ++ P GL T+ L + +SNG+ A ++N+AY V E RS+ R
Sbjct: 71 IFKDNVAQFVSQPNGGLLTVGILGTIWSASNGMNAFIRAMNQAYDVKEQRSFIKVR---- 126
Query: 137 GYVLLASVTLVIMSFVFVAIP----LALAYVRKFF--PALGNLLLIIWNGRIYATMLALF 190
G +L ++ L++ V + +P + L ++ ++F P+ ++L I + ++ L
Sbjct: 127 GLSILLTIGLIVTIVVSLLLPVFGGVLLNWISEWFSLPSGTTVVLNILRWIVGVGIMVLV 186
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ +++ P + PG + + W + ++ F+ Y+ F YS Y L ++
Sbjct: 187 LSVLY--RLAPNKTFPFAHVWPGALAATLLWQLTSLGFSFYVSNFGNYSATYGSLGGVIV 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++L++ G+ ++G E+NA IY+ K
Sbjct: 245 LMLWLFLTGLILVIGGEINA---IYHRNK 270
>gi|317127299|ref|YP_004093581.1| ribonuclease BN [Bacillus cellulosilyticus DSM 2522]
gi|315472247|gb|ADU28850.1| ribonuclease BN [Bacillus cellulosilyticus DSM 2522]
Length = 261
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 21/262 (8%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVI-DVVFGAWPEVIA 75
F E +A+ S LLS+FPF++F L FL +F VI DVV P I
Sbjct: 10 RFKEHRLIELAAQCSYYLLLSIFPFLIFILTLFSFLPLTLEFDINVIQDVV----PAEIF 65
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I + ++ + GL + S + + +S + + LNRAY V E R RLIS
Sbjct: 66 QFIEGQWTRITSQHNTGLLSFSIIFTIWTASLALNTILRLLNRAYHVTEERKMLKGRLIS 125
Query: 136 FGYVLLASVTLVIMSFVFVAIPLAL--AYVRKFFPALGNLL---LIIWNGRIYATMLALF 190
+T+ + + V VA+ L + A ++ P N+ L+ W + L LF
Sbjct: 126 I------FLTIGMFAVVLVALGLQVIGATLKDVLPFDFNIFKFNLLRWG----ISSLVLF 175
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I + ++L P + K+ + G IF + W++ +FT Y+ F+ Y+ Y + +++
Sbjct: 176 IVFMLLYLVGPNIRLKLRDVYIGAIFATLGWLLTTSMFTFYLDNFANYTATYGTIGAVIA 235
Query: 251 CLVFLYMLGVFFILGAELNASM 272
+V+ ++ V +LG E+NA +
Sbjct: 236 LMVWFHLSSVIILLGGEINAEL 257
>gi|269838968|ref|YP_003323660.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
gi|269790698|gb|ACZ42838.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
Length = 363
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 8/275 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M E +V D + ++ E+ A H++ S L +VFPF+VF +L G A + V
Sbjct: 23 MTERLGLV-DFVKQVLKEAQEDHLSVFAGHLTYSGLFAVFPFMVFLLSLLGIFRAEELVN 81
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFS----SNGVEALRISL 116
++ A P I I Q+ A G F +SAL + + S ++ ++
Sbjct: 82 ELLSRASTAMPREAVDLIGGPIRQIAQSKATGAFGLSALVSILLALWGVSGAFRSVMEAM 141
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY-VRKFFPALGNLLL 175
N Y V E R ++ LIS + L + L+I + V V +A + + LG +
Sbjct: 142 NVMYEVKEGRPFWKRYLISI-LLSLGAAVLIIAALVLVVFGADIATAIARASAGLGPVFR 200
Query: 176 IIWNGRIYATMLA-LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
W + ++ + + ++ F P + + I PG + W+V ++LF+ Y+
Sbjct: 201 WTWIILQWPVLVGFVLLAFALIYYFAPDVEQQFRFITPGSLVAVALWLVFSLLFSLYVNN 260
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
F +Y+ Y LA ++ ++++Y +LG E+N
Sbjct: 261 FGSYNKTYGALAGVIILMLYMYYSAYILLLGTEIN 295
>gi|253681524|ref|ZP_04862321.1| ribonuclease BN [Clostridium botulinum D str. 1873]
gi|253561236|gb|EES90688.1| ribonuclease BN [Clostridium botulinum D str. 1873]
Length = 271
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 120/235 (51%), Gaps = 10/235 (4%)
Query: 40 FPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTIS 97
FPF++F +A + + + + + T+ +++ P+ + I +VL L + S
Sbjct: 38 FPFLIFLFTIASYSSIQSDRILFTLKNII----PQSAYTLVYSIINEVLQSRNANLLSFS 93
Query: 98 ALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP 157
+ + +SNG +A+ +LN+AY E RS+ + ++ ++ + ++ F+ V
Sbjct: 94 FIITIWIASNGFKAVIRALNKAYGEKEERSFIKLQFMAIITTIILTFLIIFSLFILVLGN 153
Query: 158 LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF--VHLFLPAAKSKIMSILPGVI 215
L + FF NL I WN Y ML +F+ LIF ++ P K +LPG I
Sbjct: 154 LIGYKIMTFFSLPDNLFFI-WNVFRYFLML-IFMILIFAVIYKLTPCRKLTFGEVLPGSI 211
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F I W++ ++ F+ Y+ F+ YS +Y + +++ +++L++ + ++G E+NA
Sbjct: 212 FATIGWIIVSIGFSFYVDNFANYSRLYGSIGAVIILMIWLFLTSIIILIGGEINA 266
>gi|86748374|ref|YP_484870.1| ribonuclease BN, putative [Rhodopseudomonas palustris HaA2]
gi|86571402|gb|ABD05959.1| ribonuclease BN, putative [Rhodopseudomonas palustris HaA2]
Length = 356
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%), Gaps = 18/245 (7%)
Query: 32 SLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAK 91
+SAL+S + G + G L Q V PE I D++ +VLA
Sbjct: 111 GISALVSSYALFTDGGTINGHL--QQLAAIV--------PEGTYSVIEDQVGRVLANGET 160
Query: 92 --GLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
GL +S+LA A +S NG V+A+ + N Y E R + +S G+ + A ++
Sbjct: 161 RLGLAFLSSLALALWSVNGGVKAVIDASNVVYDKQESRGFIKLNALSLGFTIGALAAVLS 220
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
+ +A P+AL+ + G ++I GR L F GL ++ P +
Sbjct: 221 AIGLVIATPIALSMIGME----GQGAVLIGYGRWPLLALLTFAGLAVLYRHAPDRDTPHW 276
Query: 209 S-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+LPG +F ++W+VG+ L ++Y+ F+ Y Y L + + +++++M + ++G E
Sbjct: 277 RWVLPGCVFATLAWIVGSALLSYYLGNFANYDATYGSLGAAIGLMIWMWMTAIVVLVGGE 336
Query: 268 LNASM 272
LNA +
Sbjct: 337 LNAEI 341
>gi|167748842|ref|ZP_02420969.1| hypothetical protein ANACAC_03616 [Anaerostipes caccae DSM 14662]
gi|167651812|gb|EDR95941.1| hypothetical protein ANACAC_03616 [Anaerostipes caccae DSM 14662]
Length = 271
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 10/249 (4%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP----TVIDVVFGAWPEVIAKPITDE 81
A ++ + +LS FPF++ +L +FVP +I +V PE + +
Sbjct: 22 AFSAQAAFFTVLSFFPFLIVVLSLM------RFVPVTPKDLIGLVNYYLPEQYSVSLVAV 75
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I + + + + + +S G+ ++ LN + + E R++++ R IS Y+
Sbjct: 76 INSLYGKITTTYMSFTIITLLWSASKGILSMMTGLNTIHEIPEKRNYFVLRFISTMYIAF 135
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
+V ++I V + L + +F+P L N +I R F+ ++ FLP
Sbjct: 136 IAVAVLIGIIVLLFGNTLLNQLYQFYPFLSNQHIIFLLIRFGIAFFIFFLVFFIMYRFLP 195
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ K ++PGVIF+ W++ + LF+ Y F +S MY GL I+ L +LY +
Sbjct: 196 SEHFKARQVMPGVIFSSAGWIILSSLFSIYFDNFKFFSIMYGGLTGILLTLFWLYFCMMI 255
Query: 262 FILGAELNA 270
+GAELN
Sbjct: 256 LFIGAELNQ 264
>gi|257870278|ref|ZP_05649931.1| ribonuclease BN [Enterococcus gallinarum EG2]
gi|257804442|gb|EEV33264.1| ribonuclease BN [Enterococcus gallinarum EG2]
Length = 307
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
Query: 47 ANLAGFL--GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF 104
NL FL +P V +++ G E I I + +L + GL +ISALAA +
Sbjct: 52 GNLLPFLSIAPSNVLPYVQELIPGQVYEFIGPAIEN----LLTSGSGGLLSISALAALWS 107
Query: 105 SSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR 164
+S + AL+I++N+A+ V + ++ + R +SF +LL + +V ++ V + L +++
Sbjct: 108 ASQSINALQIAMNKAFGVDQRSNFIVVRAVSFVIILLFMIAIVGVTMVIGLGKIILDFLQ 167
Query: 165 KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
F +L+ + T++AL L+ ++ +P AK K+ S LPG +F W++
Sbjct: 168 PIFHIQDDLIATFQTVKWPLTIIALLFILMLIYWLVPNAKVKLRSTLPGAVFATAGWMLL 227
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ +F Y F+ + Y + S + +++L + ILG +NA
Sbjct: 228 SQVFGLYARFFAARISGYQIIGSFIVLMIWLNLAATIIILGGIINA 273
>gi|224476940|ref|YP_002634546.1| hypothetical protein Sca_1456 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421547|emb|CAL28361.1| hypothetical protein SCA_1456 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 358
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++++ P A +T I ++ + + ++ + A + +SNG+ AL + N AY
Sbjct: 117 KIVNMIANNAPASTADLLTGIIGDIMKNASGSILSVGLILALWSASNGMTALMNAFNVAY 176
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK----FFPALGNLLLI 176
V + R+ + +LIS + VIM VF+A + + ++ F LG I
Sbjct: 177 DVEDGRNPIVLKLISVLFT-------VIMGAVFIAAMIFPVFGQQIGHLLFGPLGLDSQI 229
Query: 177 IWNGRIYATMLA-LFIGLIFVHLFL--PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
W I + L + I L+FV L+ P K K+ S++PG +F + W++G F Y+
Sbjct: 230 KWIFNILSYALPFVVIFLLFVTLYTLAPNIKIKMKSVIPGALFASVVWILGTAAFGLYVS 289
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F+ YS Y + I+ +++LY+ G I+GAE+NA
Sbjct: 290 NFANYSKTYGSIGGIIVLMLWLYITGFIIIVGAEINA 326
>gi|103486149|ref|YP_615710.1| ribonuclease BN [Sphingopyxis alaskensis RB2256]
gi|98976226|gb|ABF52377.1| ribonuclease BN [Sphingopyxis alaskensis RB2256]
Length = 355
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 124/255 (48%), Gaps = 6/255 (2%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
DG+ A +++ AL+++FPF + A +G ++ VF P +AK ++ I
Sbjct: 82 DGFIHAGNLAYLALIALFPFFILLAAALSLVGGSVGGERAVEAVFSTMPPTVAKALSGPI 141
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+V++ + AL A + + +E +R L RAY + ++ RL+S G ++
Sbjct: 142 REVMSARTGIFLWLGALVALWTVGSLIETVRDILRRAYGTHFSKGFFHYRLLSIG-IITG 200
Query: 143 SVTLVIMSFVFVAIPLAL-AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
+V L+++SF + + + +V + P +++ R + LF+ + + L
Sbjct: 201 AVVLMLLSFSMQVLIVGVEQFVTRVLPEQYQARGLVFISRA-VSGFGLFVAIYLLFYSLT 259
Query: 202 AAKSKIMSIL---PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+K + + PG +FT + W+ + + + +Y Y LA +M L F Y++
Sbjct: 260 PSKYRRLKRCPKWPGALFTTLWWIGVTLALPPLLASLLSYDATYGSLAGVMVALFFFYLV 319
Query: 259 GVFFILGAELNASMI 273
G+ ++GAELNA+++
Sbjct: 320 GLGMVMGAELNAALV 334
>gi|317470319|ref|ZP_07929712.1| ribonuclease BN family protein [Anaerostipes sp. 3_2_56FAA]
gi|316902227|gb|EFV24148.1| ribonuclease BN family protein [Anaerostipes sp. 3_2_56FAA]
Length = 212
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%)
Query: 105 SSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR 164
+S G+ ++ LN + + E R++++ R IS Y+ +V ++I V + L +
Sbjct: 40 ASKGILSMMTGLNTIHEIPEKRNYFVLRFISTMYIAFIAVAVLIGIIVLLFGNTLLNQLY 99
Query: 165 KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
+F+P L N ++ R F+ ++ FLP+ K ++PGVIF+ W++
Sbjct: 100 QFYPFLSNQHIVFLLIRFGIAFFIFFLVFFIMYRFLPSEHFKARQVMPGVIFSSAGWIIL 159
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ LF+ Y F +S MY GL I+ L +LY + +GAELN
Sbjct: 160 SSLFSIYFDNFKFFSIMYGGLTGILLTLFWLYFCMMILFIGAELNQ 205
>gi|326792696|ref|YP_004310517.1| ribonuclease BN [Clostridium lentocellum DSM 5427]
gi|326543460|gb|ADZ85319.1| ribonuclease BN [Clostridium lentocellum DSM 5427]
Length = 289
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 126/258 (48%), Gaps = 3/258 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I + + A +++++ +L+ FPFI+F +L + V ++ + P+ +
Sbjct: 18 IRRYSAHNVSATSAYMAYYWVLAFFPFIIFLISLLSYTKIP--VSVLLQYLSEMVPDSLV 75
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I + I Q + + L ++ L + + V AL ++ AY ++ ++ RLI+
Sbjct: 76 PVIENTIKQFILYRSTALLSVGGLVTLWSAGTAVNALTRGIHIAYNSKYIKPFWQARLIA 135
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y +L ++ L+++ V Y+ + + IWN R+ +AL + L
Sbjct: 136 LVYTVLLALLLILLMVGLVFGNRLGDYLFGVLDMQKGIFMPIWNMARLTMPFIALIVVLY 195
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F+P K ++ PGV+FT + W + +++F+ Y+ +S Y+ +Y + S+ L++
Sbjct: 196 IIYKFIPRKYLKSTNVWPGVMFTSVGWYLFSLIFSIYVDNYSKYNQLYGSIGSVFILLIW 255
Query: 255 LYMLGVFFILGAELNASM 272
LY +LGAE+NA +
Sbjct: 256 LYGSCTLLLLGAEINAQL 273
>gi|326386229|ref|ZP_08207853.1| ribonuclease BN [Novosphingobium nitrogenifigens DSM 19370]
gi|326209454|gb|EGD60247.1| ribonuclease BN [Novosphingobium nitrogenifigens DSM 19370]
Length = 374
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 118/263 (44%), Gaps = 23/263 (8%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA---KPI 78
DG A + + L+S+FPF + GA L LG + V A P V+A P+
Sbjct: 85 NDGTIHAGNFAYMVLISLFPFCITGAALFSLLGKASEREAALSTVLAALPPVVAGVLGPV 144
Query: 79 TDEILQVLAVP------AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+L+ A GL+T+ +L VE +R L RAY R+++ R
Sbjct: 145 ARGVLEARTGSLLWIGGAVGLWTVGSL---------VETIRDVLRRAYGTRMTRAFWERR 195
Query: 133 LISFGYVLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L S G ++LASV L++++ VAI A + P L + + R T L LF
Sbjct: 196 LGSTG-LILASVVLILLAITAQVAIAGAQEALFALAPELDGWIAGLALSRFLPTPL-LFA 253
Query: 192 GL--IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L IFV L + + PGV+F W + + TY Y LA +M
Sbjct: 254 ALWIIFVTLTPEPYRGRRYPKWPGVLFVTCWWQAITIALPKLLRYLFTYDLTYGSLAGVM 313
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L F +++G+ ++GAELNA++
Sbjct: 314 IALFFFWLVGLGMVVGAELNAAL 336
>gi|297583355|ref|YP_003699135.1| ribonuclease BN [Bacillus selenitireducens MLS10]
gi|297141812|gb|ADH98569.1| ribonuclease BN [Bacillus selenitireducens MLS10]
Length = 290
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 128/273 (46%), Gaps = 40/273 (14%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ F +++ +A+ + +LS+FP ++ ++ + + V+++++ P IA
Sbjct: 19 QEFTKDNVPLLAAAQAYYYMLSLFPMLILILSIIPYFDLDPNI--VVELMYQFIPGEIAS 76
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS- 135
I +I+ ++ GL T LA + +SNG+ + N AY V R ++ RL+S
Sbjct: 77 MIEGQIVNLVTEQRGGLLTFGILATIWSASNGMNTFIKAQNEAYNVKVQRPFWKARLVSI 136
Query: 136 ---FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLALF 190
FG +L V L++ P +G+ ++ I G + A + LF
Sbjct: 137 ALTFGLILALIVALIL-------------------PVMGDAIISFISSFGILTAELEELF 177
Query: 191 -----------IGLIFVHLFLPAAKSKI--MSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +IF L+ A +KI LPG +F ++W + F+ YI F+
Sbjct: 178 RLLRWVVSISLLAMIFAALYYLAPNTKIPFRYALPGALFATLAWQLTGFGFSIYISNFAN 237
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+S Y L I+ +++L+++G+ ++GAE+NA
Sbjct: 238 FSQTYGSLGGIIVLMLWLFLIGIVLVVGAEINA 270
>gi|311032903|ref|ZP_07710993.1| putative Ribonuclease BN [Bacillus sp. m3-13]
Length = 286
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 12/255 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-----QFVPTVIDVVFGAWPEVIA 75
++ +A+ + +LS+FP +V ++ +L +F+ T++ PE IA
Sbjct: 17 KDRATGLAAEQAYYYMLSLFPLLVLALSIIPYLNIDPQKVIEFLQTMMP------PETIA 70
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I + + P GL T L + +SNG+ A ++N A+ V E R +Y+ RL+S
Sbjct: 71 V-FEENINEFVNKPNGGLLTFGILGTIWSASNGMNAFISAMNEAFNVEESRPFYLVRLLS 129
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
G + +I F+ V + + + G+ +I+ R +F +
Sbjct: 130 IGLTIGLIFAFLIAFFLPVFGGIIIKQLESVIYIPGSTAIILNILRFIIAFFVIFTIIAV 189
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ P +LPG I + W + ++ F+ Y+ F YS Y L ++ +++L
Sbjct: 190 LYRIAPDISKSFKQLLPGAIVATVIWQLVSLGFSFYVSNFGNYSATYGSLGGVIILMLWL 249
Query: 256 YMLGVFFILGAELNA 270
++ G+ ++G E+NA
Sbjct: 250 FLTGLALVIGGEINA 264
>gi|299535175|ref|ZP_07048499.1| transport protein [Lysinibacillus fusiformis ZC1]
gi|298729296|gb|EFI69847.1| transport protein [Lysinibacillus fusiformis ZC1]
Length = 305
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + K I + + ++L L +I L + +S G+ AL +LN+AY E R+ +
Sbjct: 92 PDEVYKLIENTLNEILTNRNSSLLSIGVLGTIWSASKGINALLRALNKAYDT-EGRAGIL 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIWNG-RIYATM 186
R G L+ ++ LVI+ V + +P+ + F F +G +W+ R
Sbjct: 151 DR----GLSLVFTIALVIVIAVALLLPVFGQQIGHFLFSIVGIEEQFESVWHRLRWSIPP 206
Query: 187 LALFIGLIFVHLFLP--AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L +FI L+ ++ F+P + + KIM + PG +F ++W+ F+ YI F+ YS Y
Sbjct: 207 LLIFIVLMGIYWFVPNTSPRLKIMGVWPGALFATLAWLAVTYGFSFYINNFANYSATYGS 266
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM 272
+ ++ +++LY G+ I G LNA+M
Sbjct: 267 IGGVIILMLWLYFTGIILIFGGVLNATM 294
>gi|262202449|ref|YP_003273657.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
gi|262085796|gb|ACY21764.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
Length = 349
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 128/263 (48%), Gaps = 9/263 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAWPEVIA 75
F + +A+ ++ A+LS+FP ++ +L G G Q V V+ +V P
Sbjct: 37 REFSRDQCTDLAAALTYYAVLSLFPALLAVVSLLGVFGQGQRTVDAVLQMVDDVGPSSAV 96
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLI 134
+ D + Q+++ P+ G + LA A +S++G V A ++NR Y + E R + R
Sbjct: 97 DTLRDPVQQLVSAPSAGFALVLGLAGALWSASGYVGAFGRAMNRMYEIDEGRPIWKLRP- 155
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLLIIWNGRIYATML--ALF 190
+L+ +V L++ + V + ++ + A+G + L +WN + +L A+
Sbjct: 156 --QMLLVTAVALLMAGAIAVMLAISGPVAKAVGDAIGAGDAALTVWNIARWPLVLIFAIL 213
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ I + + K I G + W++ +VLF Y+ FS+Y+ Y LA ++
Sbjct: 214 VVAILYYSTPNVKQPKFRWISIGATVAIVVWILASVLFGLYVANFSSYNKTYGALAGVVV 273
Query: 251 CLVFLYMLGVFFILGAELNASMI 273
L++L++ + + GAE++A ++
Sbjct: 274 FLLWLWITNLALLFGAEIDAELV 296
>gi|167761163|ref|ZP_02433290.1| hypothetical protein CLOSCI_03568 [Clostridium scindens ATCC 35704]
gi|167660829|gb|EDS04959.1| hypothetical protein CLOSCI_03568 [Clostridium scindens ATCC 35704]
Length = 281
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 57 QFVP----TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
Q+ P V+ V +P + IT + QV + G+ I+ + A + + GV A+
Sbjct: 50 QYTPVTKADVMTAVIQVFPTSVDSMITSIVNQVYN-QSSGIIPITVVVALWSAGKGVLAM 108
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
LN Y+ E R++ R+ + Y ++ + ++ + + V ++ P L N
Sbjct: 109 TSGLNCVYKCNETRNYIFLRIRATIYTVMFILVIIFLLVLSVFGNTLNIFIAAHVPILKN 168
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L + R T + L + + ++ FLP K K+ LPG +F I W++ + +F+ Y+
Sbjct: 169 LADRLIAMRTIITPIVLMVFCLLIYKFLPNRKDKLRKQLPGAVFAAIGWMIVSWIFSVYV 228
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F +S MY L +I+ ++++Y +LG ELN M
Sbjct: 229 DIFKGFSDMYGSLTTIVLIMLWMYFCMYCILLGGELNMMM 268
>gi|126649530|ref|ZP_01721771.1| ribonuclease BN, putative [Bacillus sp. B14905]
gi|126593855|gb|EAZ87778.1| ribonuclease BN, putative [Bacillus sp. B14905]
Length = 305
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + K I + + ++L L +I L + +S G+ AL +LN+AY E R+ +
Sbjct: 92 PDEVYKLIENTLKEILTNRNSSLLSIGVLGTIWSASKGINALIRALNKAYDT-EGRAGIL 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIW-NGRIYATM 186
R G L+ +V LVI+ V + +P+ + F F +G +W N R
Sbjct: 151 DR----GLSLVFTVALVIVIAVALLLPVFGQQIGHFLFSIVGIEEQFESVWHNLRWSIPP 206
Query: 187 LALFIGLIFVHLFLP--AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +FI L+ ++ F+P + + KI+ + PG +F + W++ F+ YI F+ YS Y
Sbjct: 207 ILIFIVLMGIYWFVPNTSPRLKILGVWPGAMFATLGWLMVTYAFSFYINNFANYSATYGS 266
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM 272
+ ++ +++LY G+ I G LNA+M
Sbjct: 267 IGGVIILMLWLYFTGIILIFGGVLNATM 294
>gi|115372638|ref|ZP_01459945.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|310823830|ref|YP_003956188.1| ribonuclease bn family protein [Stigmatella aurantiaca DW4/3-1]
gi|115370359|gb|EAU69287.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|309396902|gb|ADO74361.1| Ribonuclease BN family protein [Stigmatella aurantiaca DW4/3-1]
Length = 349
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
I + + ++ P L T+ L A + +S GV+ALR +LN AY V E R + T+ ++
Sbjct: 82 IDEHLRSLVNQPRPKLLTLGFLVALWSASRGVDALRKALNLAYDVPESRPVWKTQGVAML 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIWNGRIY---ATMLALFI 191
L+ ++ L + VF L V ++F L+ + W+ + A+++ L +
Sbjct: 142 MTLVGTLLLPLSFTVF----LLGGRVGQWFAERLQLIDAFHLFWSWLRWPFTASLVMLML 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L + LP K + I PG + + W+V FT Y+ F Y+ Y + ++
Sbjct: 198 ALCYY--VLPDVKQRFKYITPGSVLGTVLWLVSTWGFTQYVDEFGNYNVTYGSIGGVVVL 255
Query: 252 LVFLYMLGVFFILGAELNA 270
L +LY+ G+ FI+G E+NA
Sbjct: 256 LTWLYISGLIFIVGGEVNA 274
>gi|166032624|ref|ZP_02235453.1| hypothetical protein DORFOR_02339 [Dorea formicigenerans ATCC
27755]
gi|166026981|gb|EDR45738.1| hypothetical protein DORFOR_02339 [Dorea formicigenerans ATCC
27755]
Length = 273
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 123/266 (46%), Gaps = 11/266 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP----TVI 63
++D I + ++ A A+ + +L + P I+ L Q+ P V+
Sbjct: 7 LYDDIMELTGEITKDHVGAYAAQTAFFFMLCMIPIILL------LLTMVQYTPVTKADVM 60
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V +P + IT + QV + G+ I+ + A + + GV A+ LN Y
Sbjct: 61 TAVIQVFPSSVDSLITSIVNQVYN-QSSGIIPITIVVALWSAGKGVLAMSSGLNCVYNCR 119
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R+++ R+ + Y ++ + ++ + + V ++ + P L N+ + R
Sbjct: 120 ETRNYFFLRIRATVYTVMFILVIIFLLVLSVFGNSLNIFIAEHVPFLRNMADWLIRARNI 179
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T + + + L+ ++ FLP + LPG +F+ + W+V + +F+ Y+ F +S+MY
Sbjct: 180 ITPIVMIVFLLLIYKFLPNRRDTYKRQLPGAVFSTLGWMVISWVFSVYVDVFKGFSSMYG 239
Query: 244 GLASIMTCLVFLYMLGVFFILGAELN 269
L +IM ++++Y ++G ELN
Sbjct: 240 SLTTIMLIMMWMYFCMYCILIGGELN 265
>gi|300774226|ref|ZP_07084093.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300758905|gb|EFK55734.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 322
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 14/264 (5%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ E AS ++ + LL++FP I+F + ++ F +++ + P
Sbjct: 43 QEIARESILNKASSLAYNFLLAMFPAIIFLFTMIPYIPIDNFQEQLLEFLKVIIPHNAFD 102
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I + ++ GL + + AA+FS+NG+ L ++ N+A E RSW RL++
Sbjct: 103 VIQTTLEDIIKNQNGGLLSFGFVLAAFFSTNGMHTLMLAFNKASLTTENRSWIRQRLVAL 162
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII---WNGRIYATMLALFIGL 193
V L + +F + + Y++ N+ + + W I A + G+
Sbjct: 163 ALSFTIIVALTVGMGIFTFAGIVINYLK------SNISVDVSWFWTFIIKAARWIILFGI 216
Query: 194 IF-----VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F ++ F PA+ K PG I ++ F +YI F Y+ +Y + +I
Sbjct: 217 YFFTVSCLYKFGPASNQKWKLFSPGATLATILAILTFSGFAYYINHFGAYNKLYGSIGTI 276
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ ++++Y+ + ++G ELNAS+
Sbjct: 277 IVIMIWMYLNSLILLVGYELNASI 300
>gi|23098330|ref|NP_691796.1| hypothetical protein OB0875 [Oceanobacillus iheyensis HTE831]
gi|22776556|dbj|BAC12831.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 274
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 9/204 (4%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + + I+ L L GL +IS L + +SNGV A+ + NR+Y + RS++
Sbjct: 65 PEQVMQLISTN-LDTLTEQNTGLLSISILGTLWAASNGVNAITRAFNRSYWIDTERSFFT 123
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIP----LALAYVRKFFPALGNLLLIIWNGRIYATM 186
TRLIS ++ ++ +VI+ + + +P + YV F + I R +
Sbjct: 124 TRLIS----IVLTIGMVIIILLALLLPVFGRMIGLYVFSMFGFTTGFIEIWETLRWIISS 179
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
FI L+F++ P + ++ G +F SW + + F+ Y+ YST Y L
Sbjct: 180 AIFFIVLLFLYKLAPHKRIVFSEVIWGTVFATFSWQLVSWGFSFYVNNLGNYSTTYGSLG 239
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+++ +++ Y+ G+ I G LNA
Sbjct: 240 TVIVLMIWFYLFGIIIITGGVLNA 263
>gi|256847880|ref|ZP_05553325.1| ribonuclease BN [Lactobacillus coleohominis 101-4-CHN]
gi|256715569|gb|EEU30545.1| ribonuclease BN [Lactobacillus coleohominis 101-4-CHN]
Length = 296
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 124/256 (48%), Gaps = 2/256 (0%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
HF A A+ ++ +LLS+FP I+ NL +G TV+ + A PE +
Sbjct: 17 HHFQMAQVSASAAVLAYYSLLSIFPAILVVGNLLPMIGID--ANTVLGYLQTAVPESVFA 74
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I + L + G+ T A+ A + +S G+ A + S+N AY V E ++ I R +SF
Sbjct: 75 FIKPIVYDFLRHGSGGILTTGAVIALWSTSQGIAAFQRSVNHAYGVAENQNPIINRTVSF 134
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
++L+ + L +M+ + L ++ F + + + T +LFI L +
Sbjct: 135 IWMLVVILILFLMALTYGIGEDLLQSLQPIFRFNTSYIKTFAQLKWPVTFFSLFIALTLL 194
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ F+P A+ ++ ++ G + + W+ + +F+ Y S T Y + + + +++L
Sbjct: 195 YYFVPNARVRLRYVVVGAVIVALLWMGLSRVFSMYAQLLSRRVTSYKTIGAFIAMMIWLD 254
Query: 257 MLGVFFILGAELNASM 272
G+ ++GA +NA++
Sbjct: 255 FSGMLVMIGATINATL 270
>gi|28868803|ref|NP_791422.1| ribonuclease BN [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969591|ref|ZP_03397727.1| ribonuclease BN [Pseudomonas syringae pv. tomato T1]
gi|302058803|ref|ZP_07250344.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato K40]
gi|302134492|ref|ZP_07260482.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28852042|gb|AAO55117.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925687|gb|EEB59246.1| ribonuclease BN [Pseudomonas syringae pv. tomato T1]
gi|331017340|gb|EGH97396.1| ribonuclease BN, putative [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 323
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRFPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A +L L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIILLLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|330967398|gb|EGH67658.1| ribonuclease BN [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 323
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRFPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A +L L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIILLLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|330957628|gb|EGH57888.1| ribonuclease BN [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 323
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRFPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + ++ +W R A +L L I +
Sbjct: 138 ILYTIGIAGMLLAAAAFMVLG-PQVMNWIAAQV-GMEEFIVTLWTILRWPAIILLLMIAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|225573600|ref|ZP_03782355.1| hypothetical protein RUMHYD_01794 [Blautia hydrogenotrophica DSM
10507]
gi|225039039|gb|EEG49285.1| hypothetical protein RUMHYD_01794 [Blautia hydrogenotrophica DSM
10507]
Length = 323
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 9/273 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ V + I ++ A A+ + +LS PF++F L Q+ P
Sbjct: 1 MKKKLGPVLSSLSGFIRRTQKDHVGAYAAQAAYFIILSFIPFMLFLMTLV------QYTP 54
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLA---VPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ V A + + I +L ++A + + ++ + A + + G++AL LN
Sbjct: 55 LTYNAVRSAIVSFLPREIQSFVLGIVAEVFSKSGAVLPVTLVTAIWSAGKGIQALTNGLN 114
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y V E R+W TRL S Y +L L+ + V + ++ P LG ++
Sbjct: 115 TIYHVKETRNWLTTRLWSMLYTVLFVFALIGSLILLVFGNSIQQTLMRYVPFLGEMVARF 174
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + L + +F++ LP ++ + S +PG + T I+W V + F+ Y F
Sbjct: 175 LGAKNFLVFIVLVLLFLFLYKALPNRRASLKSQVPGAVLTAIAWSVFSFGFSIYFTFFPN 234
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+S MY L +I+ ++++Y+ + GAE+NA
Sbjct: 235 FSNMYGSLTTIILIMLWMYICMNIVLFGAEINA 267
>gi|227538328|ref|ZP_03968377.1| TRNA-processing ribonuclease BN [Sphingobacterium spiritivorum ATCC
33300]
gi|227241843|gb|EEI91858.1| TRNA-processing ribonuclease BN [Sphingobacterium spiritivorum ATCC
33300]
Length = 322
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 118/264 (44%), Gaps = 14/264 (5%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ E AS ++ + LL++FP I+F + ++ F +++ + P
Sbjct: 43 QEIARESILNKASSLAYNFLLAMFPAIIFLFTMIPYIPIDNFQEQLLEFLKVIIPHNAFG 102
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I + ++ GL + + AA+FS+NG+ L ++ N+A E RSW RL++
Sbjct: 103 VIQTTLEDIIKNQNGGLLSFGFVLAAFFSTNGMHTLMLAFNKASLTTENRSWVRQRLVAL 162
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII---WNGRIYATMLALFIGL 193
V L + +F + + Y++ N+ + + W I A + G+
Sbjct: 163 ALSFTIIVALTVGMSIFTFAGIVINYLK------SNISVDVSWFWTFIIKAARWIILFGI 216
Query: 194 IF-----VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F ++ F PA+ K PG I ++ F +YI F Y+ +Y + +I
Sbjct: 217 YFFTVSCLYKFGPASNQKWKLFSPGATLATILAILTFSGFAYYINHFGAYNKLYGSIGTI 276
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ ++++Y+ + ++G ELNAS+
Sbjct: 277 IVIMIWMYLNSLILLVGYELNASI 300
>gi|218517092|ref|ZP_03513932.1| putative ribonuclease protein [Rhizobium etli 8C-3]
Length = 52
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 42/52 (80%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF 52
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG L F
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALQAF 52
>gi|194466846|ref|ZP_03072833.1| ribonuclease BN [Lactobacillus reuteri 100-23]
gi|194453882|gb|EDX42779.1| ribonuclease BN [Lactobacillus reuteri 100-23]
Length = 296
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+H + A+ ++ LLS+FP ++ NL +G T++ + A PE +
Sbjct: 16 IQHITMAQISSSAAVLAYYTLLSIFPAVMVVGNLLPMIGID--AKTILAYLSTAIPESVY 73
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I I L + G+ T AL A + +S G+ A + S+N AY + E ++ + R++S
Sbjct: 74 SFIQPLIYDFLRRGSGGILTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPVMNRIVS 133
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
F ++++ V + I+ ++ L ++ F + + I + R T LFI L
Sbjct: 134 FVWMIVVLVIIFIIIILYGFGEQVLKSIQPIFNFRRDYIAIFSSLRWPVTFGVLFIALTL 193
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ F+P AK ++ L G + W+ + LF+ Y + FS Y + + + +V+L
Sbjct: 194 LYYFVPNAKVRLRYALAGSFLASLLWMGLSRLFSFYTLLFSHGVISYKTIGAFIAMMVWL 253
Query: 256 YMLGVFFILGAELNASM 272
G +LGA LNA++
Sbjct: 254 DFSGYIIMLGAALNAAL 270
>gi|289676936|ref|ZP_06497826.1| ribonuclease BN [Pseudomonas syringae pv. syringae FF5]
gi|330896887|gb|EGH28477.1| ribonuclease BN [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330942464|gb|EGH45061.1| ribonuclease BN [Pseudomonas syringae pv. pisi str. 1704B]
Length = 321
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|66047009|ref|YP_236850.1| ribonuclease BN [Pseudomonas syringae pv. syringae B728a]
gi|63257716|gb|AAY38812.1| Ribonuclease BN [Pseudomonas syringae pv. syringae B728a]
Length = 321
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|320327458|gb|EFW83471.1| ribonuclease BN, putative [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 316
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|330971090|gb|EGH71156.1| ribonuclease BN [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 321
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|302187707|ref|ZP_07264380.1| ribonuclease BN [Pseudomonas syringae pv. syringae 642]
Length = 321
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|330949876|gb|EGH50136.1| ribonuclease BN [Pseudomonas syringae Cit 7]
Length = 322
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|330877283|gb|EGH11432.1| ribonuclease BN [Pseudomonas syringae pv. glycinea str. race 4]
Length = 313
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|257486817|ref|ZP_05640858.1| ribonuclease BN, putative [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289625973|ref|ZP_06458927.1| ribonuclease BN, putative [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647974|ref|ZP_06479317.1| ribonuclease BN, putative [Pseudomonas syringae pv. aesculi str.
2250]
gi|298488187|ref|ZP_07006224.1| Ribonuclease BN [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298157466|gb|EFH98549.1| Ribonuclease BN [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330869370|gb|EGH04079.1| ribonuclease BN [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330988666|gb|EGH86769.1| ribonuclease BN [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 322
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|227543996|ref|ZP_03974045.1| ribonuclease BN [Lactobacillus reuteri CF48-3A]
gi|300909547|ref|ZP_07127008.1| YihY family protein [Lactobacillus reuteri SD2112]
gi|227186025|gb|EEI66096.1| ribonuclease BN [Lactobacillus reuteri CF48-3A]
gi|300893412|gb|EFK86771.1| YihY family protein [Lactobacillus reuteri SD2112]
Length = 298
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+H + A+ ++ LLS+FP ++ NL +G T++ + A PE +
Sbjct: 16 IQHITMAQISSSAAVLAYYTLLSIFPAVMVVGNLLPMIGID--AKTILAYLSTAIPESVY 73
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I I L + G+ T AL A + +S G+ A + S+N AY + E ++ + R++S
Sbjct: 74 DFIQPLIYDFLRRGSGGVLTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPVMNRIVS 133
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
F ++++ V + I+ ++ L ++ F + + + + R T LFI L
Sbjct: 134 FVWMIVVLVIIFIIIILYGFGEQVLKSIQPIFNFRRDYISLFSSLRWPVTFGVLFIALTL 193
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ F+P AK ++ L G + W+ + LF+ Y + FS Y + + + +V+L
Sbjct: 194 LYYFVPNAKVRLRYALAGSFLASLLWMGLSRLFSFYTILFSHSVISYKTIGAFIAMMVWL 253
Query: 256 YMLGVFFILGAELNASM 272
G +LGA LNA++
Sbjct: 254 DFSGYIIMLGAALNAAL 270
>gi|312129376|ref|YP_003996716.1| ribonuclease bn [Leadbetterella byssophila DSM 17132]
gi|311905922|gb|ADQ16363.1| ribonuclease BN [Leadbetterella byssophila DSM 17132]
Length = 304
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 119/248 (47%), Gaps = 5/248 (2%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
A+ ++ S LL+VFP I+F L ++ ++D PE + + I ++++
Sbjct: 48 ATSVAFSFLLAVFPGILFLFTLIPYIPIDHLDIQIMDFSRNLMPEGLYDVVAQTIYEIIS 107
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
P + + + Y ++NG+ +L + N A + R + +R + ++L LV
Sbjct: 108 RPRGDILSFGFFFSLYAATNGINSLTNAFNGALEKKKDRGFMRSRGTAALVLVLLVTVLV 167
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI---GLIFVHLFLPAAK 204
I + +A + L Y+ + + + + IW R + FI G+ ++ F PA
Sbjct: 168 ISVVILIAGKIVLNYIAR--AGILDDQINIWGIRTLGYLSIFFIFYFGIACLYYFAPAMD 225
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
KI G F+ + ++ LF++Y+ FS+Y+ +Y + +++ +V+ Y++ + IL
Sbjct: 226 KKIRFFNFGAFFSSVLSILATNLFSYYLENFSSYNKLYGSIGTLIAIMVWTYLICLILIL 285
Query: 265 GAELNASM 272
G E+N +
Sbjct: 286 GFEINVDL 293
>gi|71737082|ref|YP_273727.1| ribonuclease BN [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71557635|gb|AAZ36846.1| ribonuclease BN, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320325401|gb|EFW81466.1| ribonuclease BN, putative [Pseudomonas syringae pv. glycinea str.
B076]
Length = 322
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|331010287|gb|EGH90343.1| ribonuclease BN [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 258
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 18 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 73
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 74 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 131
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 132 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 191
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 192 YFYISAAVLLLGAEMNA 208
>gi|226362631|ref|YP_002780409.1| ribonuclease [Rhodococcus opacus B4]
gi|226241116|dbj|BAH51464.1| putative ribonuclease [Rhodococcus opacus B4]
Length = 363
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 126/267 (47%), Gaps = 7/267 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGA 69
+I F ++ +A+ ++ A+LS+FP ++ +L G G Q TV+ +V
Sbjct: 31 VIRKTAHEFTRDECTDLAAALTYYAVLSLFPALLAMVSLLGVFGQGQRTTDTVLQIVDDL 90
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS- 127
P + D I Q++ P+ G I L A +S++G + A ++NR Y V E R
Sbjct: 91 GPSSAVDTLRDPITQLVQTPSAGAALILGLLGAVWSASGYIGAFGRAMNRIYEVEEGRPV 150
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W + L ++ + + + ++ P+A + G+ L +WN + +L
Sbjct: 151 WKLRPLQLLVTLVGLVLVALAALMLAISGPVARSVGDAI--GFGDTALTVWNIARWPFIL 208
Query: 188 ALFI-GLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ I + ++ P + K + G + ++W++ +VLF Y+ F +Y+ Y L
Sbjct: 209 GVVIVAVAILYYVTPNVQQPKFRWVSAGALVGIVTWILVSVLFGLYVSNFGSYNKTYGSL 268
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
A ++ L++L++ + + GAEL+A +
Sbjct: 269 AGVIVFLLWLWITNLALLFGAELDAEL 295
>gi|111019911|ref|YP_702883.1| tRNA processing ribonuclease BN [Rhodococcus jostii RHA1]
gi|110819441|gb|ABG94725.1| tRNA processing ribonuclease BN [Rhodococcus jostii RHA1]
Length = 346
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 124/267 (46%), Gaps = 7/267 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
+I F + +A+ ++ A+LS+FP ++ +L G G Q V+ +V
Sbjct: 31 VIRKTAHEFTRDQCTDLAAALTYYAVLSLFPALLALVSLLGVFGQGQRTTDAVLQMVDDL 90
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS- 127
P + D I Q++A P G+ + L A +S++G + A ++NR Y V E R
Sbjct: 91 GPSSAVDTLRDPIAQLVAAPTAGMALVLGLLGAVWSASGYIGAFGRAMNRMYEVEEGRPV 150
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W + + ++ + + + ++ P+A + G+ L +WN + +L
Sbjct: 151 WKLRPQMLAVTIVGLVLVAAAAAMLALSGPVARSVGDTI--GFGDTALTVWNIARWPFVL 208
Query: 188 ALFI-GLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + ++ P K K I G ++W+V +VLF Y+ F +Y+ Y L
Sbjct: 209 GIVVVAVAILYYVTPNVKQPKFRWISAGAFLAIVTWIVASVLFGLYVANFGSYNKTYGSL 268
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
A ++ L++L++ + + GAEL+A +
Sbjct: 269 AGVIVFLLWLWITNLALLFGAELDAEL 295
>gi|104782989|ref|YP_609487.1| ribonuclease BN [Pseudomonas entomophila L48]
gi|95111976|emb|CAK16703.1| putative ribonuclease BN [Pseudomonas entomophila L48]
Length = 318
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 98/196 (50%), Gaps = 6/196 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL ++ + A + +S GV + ++N AY V E R + +S
Sbjct: 82 NPVIDQLQQS----KGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRPVWKRFPLS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y + + L+ + + V P + ++ L ++++W R A ++ + + +
Sbjct: 138 IIYTVGIAGMLLAAAALMVLGPQVMEWIASQV-GLEEAVVVVWTILRWPAIIILMMVAVA 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K K I PG + + W+V ++ F +Y+ TF+ Y+ MY + +I+ L++
Sbjct: 197 LIYYVMPDVKQKFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGAIIVLLLY 256
Query: 255 LYMLGVFFILGAELNA 270
Y+ +LGAE+NA
Sbjct: 257 FYISAAVLLLGAEMNA 272
>gi|254975207|ref|ZP_05271679.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-66c26]
gi|255092597|ref|ZP_05322075.1| putative membrane-associated ribonuclease [Clostridium difficile
CIP 107932]
gi|255100703|ref|ZP_05329680.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-63q42]
gi|255306592|ref|ZP_05350763.1| putative membrane-associated ribonuclease [Clostridium difficile
ATCC 43255]
gi|255314334|ref|ZP_05355917.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-76w55]
gi|255517013|ref|ZP_05384689.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-97b34]
gi|255650115|ref|ZP_05397017.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-37x79]
gi|260683242|ref|YP_003214527.1| putative membrane-associated ribonuclease [Clostridium difficile
CD196]
gi|260686838|ref|YP_003217971.1| putative membrane-associated ribonuclease [Clostridium difficile
R20291]
gi|306520120|ref|ZP_07406467.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-32g58]
gi|260209405|emb|CBA62875.1| putative membrane-associated ribonuclease [Clostridium difficile
CD196]
gi|260212854|emb|CBE04061.1| putative membrane-associated ribonuclease [Clostridium difficile
R20291]
Length = 279
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 135/284 (47%), Gaps = 24/284 (8%)
Query: 8 VFDIIYDAIEHFVEEDGWA----MASHISLSALLSVFPFIVFGANLAGF---LGAHQFVP 60
+F I IE+ + + ++ ++ +S +LS+FPF++F + + L ++++
Sbjct: 1 MFGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHLNKYIA 60
Query: 61 TVIDVV----FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+++ F +I I + L+ LAV S + + S V+AL +
Sbjct: 61 LFRNMMPEGAFAVLSSIIVSAIDNRNLKFLAV--------SFVLTMWTFSRAVKALIKGM 112
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
NRAY+V E RS++ ISF + ++ V L+ +S +F+ + Y L + +
Sbjct: 113 NRAYKVKETRSFFKILSISFLFTIMLLV-LIFLSMIFLVYGEKIGYFIFNLVGLDEIFIK 171
Query: 177 IWN-GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
IW+ R ++ + + ++ + P K I PG IF +W + + L+++Y +
Sbjct: 172 IWDILRYTVGIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYY 231
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y +Y +A I+ + ++Y ++G E+N+ + Y+RK
Sbjct: 232 ANYEVIYGSIAEIIVLMTWMYFSSWSIVIGYEVNSRL---YFRK 272
>gi|237798880|ref|ZP_04587341.1| ribonuclease BN [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021734|gb|EGI01791.1| ribonuclease BN [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 323
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRFPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + +++ +W R A ++ L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQV-GMEEIIVTLWTILRWPAIIILLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|255655600|ref|ZP_05401009.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-23m63]
gi|296451602|ref|ZP_06893336.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP08]
gi|296878848|ref|ZP_06902848.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP07]
gi|296259520|gb|EFH06381.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP08]
gi|296430120|gb|EFH15967.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP07]
Length = 279
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 135/284 (47%), Gaps = 24/284 (8%)
Query: 8 VFDIIYDAIEHFVEEDGWA----MASHISLSALLSVFPFIVFGANLAGF---LGAHQFVP 60
+F I IE+ + + ++ ++ +S +LS+FPF++F + + L ++++
Sbjct: 1 MFGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHLNKYIA 60
Query: 61 TVIDVV----FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+++ F +I I + L+ LAV S + + S V+AL +
Sbjct: 61 LFRNMMPEGAFAVLSSIIVSAIDNRNLKFLAV--------SFVLTMWTFSRAVKALIKGM 112
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
NRAY+V E RS++ ISF + ++ V L+ +S +F+ + Y L + +
Sbjct: 113 NRAYKVKETRSFFKILSISFLFTIMLLV-LIFLSMIFLVYGEKIGYFIFNLIGLDEIFIK 171
Query: 177 IWN-GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
IW+ R ++ + + ++ + P K I PG IF +W + + L+++Y +
Sbjct: 172 IWDILRYTVGIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYY 231
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y +Y +A I+ + ++Y ++G E+N+ + Y+RK
Sbjct: 232 ANYEVIYGSIAEIIVLMTWMYFSSWSIVIGYEVNSRL---YFRK 272
>gi|197116537|ref|YP_002136964.1| ribonuclease BN family protein [Geobacter bemidjiensis Bem]
gi|197085897|gb|ACH37168.1| ribonuclease BN family protein [Geobacter bemidjiensis Bem]
Length = 316
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 6/275 (2%)
Query: 1 MREYFCI----VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH 56
+R YF + ++ A + F EED A+ ++ L + FPF++F L +L
Sbjct: 4 LRRYFKLGDTSYKELAKRAFKKFSEEDCPEHAAAMAYYFLFASFPFLLFLTTLIAYLPIP 63
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ V+D P I D I + +GL ++ + A + SSN + ++ ++
Sbjct: 64 HLLDYVLDNASRVLPGETFTLIEDNIQALFTNKKQGLLSMGIVLALWASSNAIVSVMDAM 123
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVT-LVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
N Y V E R ++ RLI+ G V+ SV LV M+ + + YV G +
Sbjct: 124 NNLYDVKEGRPFWKVRLIAIGLVIGLSVLFLVAMAALMFGNQIG-DYVAGLINFGGAFKV 182
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + T+ L + + ++ F P + + + I PG + SW++ ++ F++YI F
Sbjct: 183 AWFAALVPVTLFVLVLAVAVIYYFTPDVEHQWVWISPGAVIAIPSWILMSLAFSYYINNF 242
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+Y Y + +++ L++LY+ G+ + GA +N+
Sbjct: 243 GSYDKTYGSIGAVIVLLLWLYLTGLIILAGAVVNS 277
>gi|170723022|ref|YP_001750710.1| ribonuclease BN [Pseudomonas putida W619]
gi|169761025|gb|ACA74341.1| ribonuclease BN [Pseudomonas putida W619]
Length = 317
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 98/196 (50%), Gaps = 6/196 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL ++ + A + +S GV + ++N AY V E R + +S
Sbjct: 82 NPVIDQLQQS----KGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRPVWKRIPLS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y + + L+ + + V P + ++ + +++ +W R A ++ + + +
Sbjct: 138 IIYTVGIAGMLLAAAALMVLGPQVMEWIAAQI-GMQEVIVTVWTILRWPAIIILMMVAVA 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K K I PG + + W++ ++ F +Y+ TF+ Y+ MY + +I+ L++
Sbjct: 197 VIYYVMPDVKQKFRFITPGSVLAVVVWIIASLAFAYYVKTFADYNAMYGSIGAIIVLLLY 256
Query: 255 LYMLGVFFILGAELNA 270
Y+ +LGAE+NA
Sbjct: 257 FYISAAVLLLGAEMNA 272
>gi|218461679|ref|ZP_03501770.1| putative ribonuclease protein [Rhizobium etli Kim 5]
Length = 88
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 43/53 (81%)
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
W+ GA++F +Y+ TF+ Y+ YAGLAS+M L+FLYM+G FI+GAE+NA++I
Sbjct: 2 WLAGALIFAYYLATFANYTATYAGLASVMIVLIFLYMVGAIFIIGAEINAALI 54
>gi|89097736|ref|ZP_01170624.1| hypothetical protein B14911_15112 [Bacillus sp. NRRL B-14911]
gi|89087595|gb|EAR66708.1| hypothetical protein B14911_15112 [Bacillus sp. NRRL B-14911]
Length = 286
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-----AHQFVPTVIDVVFGAWP 71
+ ++ +A+ + +LS+FP ++ ++ +L A F+ TV+ P
Sbjct: 13 KEIKDDRATGLAAEQAYYYMLSIFPILILLLSIVPYLNIDPQKAISFLQTVM-------P 65
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + ++ ++ P+ GL T + + +SNG++A ++N+A+ V E RS+
Sbjct: 66 SETAAVFEENVVNIVTQPSGGLLTFGIIGTLWSASNGMQAFIRAMNQAFDVEETRSFIKA 125
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RLIS G L +L++ + V + L V+ F + ++ R ++ +
Sbjct: 126 RLISIGLTLGLIFSLIVALVLPVFGNVILDLVQSFINIPDEMQILFSVLRWVVAIIVIAA 185
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ P ++PG + + W + ++ + YI F+ YS Y L ++
Sbjct: 186 VLSVLYKLAPNKHYPFKHVIPGAVAATVIWQLISLGLSIYIGNFANYSGTYGSLGGVIVL 245
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ Y+ G+ ++G E+NA IY+ +
Sbjct: 246 MLWFYLTGLTLVVGGEINA---IYHRER 270
>gi|115374664|ref|ZP_01461942.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|310820812|ref|YP_003953170.1| ribonuclease bn [Stigmatella aurantiaca DW4/3-1]
gi|115368332|gb|EAU67289.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|309393884|gb|ADO71343.1| Ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
Length = 352
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 127/273 (46%), Gaps = 21/273 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL----GAHQ 57
+E+F + D + + +A ++ SA+L++FPF++F +LA + A Q
Sbjct: 11 KEFFKSLKD-------EYTRDKVGDVAGALTFSAILAIFPFLLFLVSLASVIIDPAQAEQ 63
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + V P+ + + D + + A GL T+ + A + +S G+ AL +LN
Sbjct: 64 LIQELARVA----PKEVVTILGDRLHALAASNNVGLLTLGGVGAVWAASGGMVALMTALN 119
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
AY V E R ++ R ++ L+ + ++ + V P V FP L +
Sbjct: 120 TAYGVEESRPFWKVRGVALLVTLVTAAISILAAAAAVVTPALAEKVGGPFPTL-----VT 174
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
W A ++ +F+ ++ LP + + I PG + + W++ + F+ Y+ F +
Sbjct: 175 WLRLPVAGVMMMFV-WALLYYALPDVQQRFRFITPGSVAGVLIWLLASWGFSQYVANFGS 233
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y Y + ++ L+++++ ++GAE+NA
Sbjct: 234 YDANYGAIGGVIVLLMWMWISSQVILVGAEINA 266
>gi|328464131|gb|EGF35603.1| ribonuclease BN-like family protein [Lactobacillus rhamnosus MTCC
5462]
Length = 215
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 14/192 (7%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL I A+A + +S GV L++ N+ Y V +++ I RL+S +L + TL+I
Sbjct: 2 GLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQNFIIQRLLS----MLMTFTLII--- 54
Query: 152 VFVAIPLALAYVRKFFPALGNLL------LIIWNG-RIYATMLALFIGLIFVHLFLPAAK 204
V AI +A A+ R+F L LL L +N R T+ ALFI ++F+ FLP K
Sbjct: 55 VMGAILIAFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITVTALFIIIMFLDYFLPNVK 114
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
K+ ++LPG FT I W++ A F+ Y+ F T Y + + + +++L + +
Sbjct: 115 IKMWTVLPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIGTFIAIMLWLNFSALVLLW 174
Query: 265 GAELNASMIIYY 276
GA +NA Y+
Sbjct: 175 GAVINALTAEYF 186
>gi|86133182|ref|ZP_01051764.1| ribonuclease BN-like family protein [Polaribacter sp. MED152]
gi|85820045|gb|EAQ41192.1| ribonuclease BN-like family protein [Polaribacter sp. MED152]
Length = 314
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 138/283 (48%), Gaps = 25/283 (8%)
Query: 12 IYDAIEHF----VEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVID 64
+YD +E + VE AS I+ S +++FPF++F L ++ GA + + ++I
Sbjct: 35 LYDVLEMYLIGIVEGALTTRASGIAYSFFMAIFPFLLFILTLIPYVPIDGAQEGLLSIIS 94
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
V P + I+ ++ GL + + + + +NGV A+ +Y V E
Sbjct: 95 DVL---PPKTFDAVDTVIIDIINNQYGGLLSFGFIGSIFLMTNGVNAIFGGFEFSYHVKE 151
Query: 125 MRS----WYITRLISFGYVLLASVTLVIMSFVFVAIP--LALAYVRKFFPALGNLLLI-I 177
+R+ ++I +SF V +T+VI+ F + + + LA++ NL+ I +
Sbjct: 152 IRNIFRAYFIAMFVSFVIVAFLLITVVIIIFFELILKDYVTLAWLED------NLIWIQL 205
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G I+ M+ + + +++ + S+ S PG +FT + V+ LF Y+ F+
Sbjct: 206 VRGSIFLAMIFITVSMLYHYGVKEGKYSRFFS--PGAVFTTVLSVLSFYLFGFYVTEFAK 263
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y+ +Y + +++ ++F+++ + +LG ELNAS+ R K
Sbjct: 264 YNELYGSIGTLLILMLFIWLNAIILLLGFELNASIYSLRVRNK 306
>gi|255027017|ref|ZP_05299003.1| transport protein [Listeria monocytogenes FSL J2-003]
Length = 141
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 178 WNG-RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
WN R T++ +F+ F++ P +S ++S+LPG +F+ I W V ++ F +Y+ F
Sbjct: 33 WNNLRWTVTLIVIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFG 92
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
YS Y + I+ +++ Y+ G+ ++G ELNA++ I RKK
Sbjct: 93 NYSATYGSIGVIIILMLWFYLTGIILMIGGELNATLAI---RKKK 134
>gi|148544597|ref|YP_001271967.1| ribonuclease BN [Lactobacillus reuteri DSM 20016]
gi|184153955|ref|YP_001842296.1| hypothetical protein LAR_1300 [Lactobacillus reuteri JCM 1112]
gi|227363716|ref|ZP_03847825.1| possible ribonuclease BN [Lactobacillus reuteri MM2-3]
gi|325682926|ref|ZP_08162442.1| YihY family protein [Lactobacillus reuteri MM4-1A]
gi|148531631|gb|ABQ83630.1| putative ribonuclease BN [Lactobacillus reuteri DSM 20016]
gi|183225299|dbj|BAG25816.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227071210|gb|EEI09524.1| possible ribonuclease BN [Lactobacillus reuteri MM2-3]
gi|324977276|gb|EGC14227.1| YihY family protein [Lactobacillus reuteri MM4-1A]
Length = 296
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 2/257 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+H + A+ ++ LLS+FP ++ NL +G T++ + A PE +
Sbjct: 16 IQHITMAQISSSAAVLAYYTLLSIFPAVMVVGNLLPMIGID--AKTILAYLSTAIPESVY 73
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I I L + G+ T AL A + +S G+ A + S+N AY + E ++ + R++S
Sbjct: 74 DFIQPLIYDFLRRGSGGVLTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPVMNRIVS 133
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
F ++++ V + I+ ++ L ++ F + + I + R T LFI L
Sbjct: 134 FVWMIVLLVIIFIIIILYGFGEQVLKSIQPIFNFRRDYIAIFSSLRWPVTFGVLFIALTL 193
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ F+P AK ++ L G + W+ + LF+ Y + F Y + + + +V+L
Sbjct: 194 LYYFVPNAKVRLRYALAGSFLASLLWMGLSRLFSFYTLLFGHGVISYKTIGAFIAMMVWL 253
Query: 256 YMLGVFFILGAELNASM 272
G +LGA LNA++
Sbjct: 254 DFSGYIIMLGAALNAAL 270
>gi|148273269|ref|YP_001222830.1| hypothetical protein CMM_2087 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831199|emb|CAN02152.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 395
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 128/264 (48%), Gaps = 7/264 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAWPEV 73
A+ F++ G MA+ ++ + LS+ P V +L G +G + V V+ V+ +
Sbjct: 42 AVYGFMKHRGIDMAASLTFYSTLSLVPAAVAVLSLIGVVGDTRAGVEGVLGVLTAVLGDS 101
Query: 74 IAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I D + Q+ P G+ FT+S L A + S+ V A ++NR E R R
Sbjct: 102 AVDVIRDPVEQLADGPRSGIAFTVSFLGALWTSAAYVTAFGRAMNRVQETEEGRPLVKYR 161
Query: 133 LISFG-YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ G V L V++V++ + + A A ++ LG+ L++W + + AL
Sbjct: 162 ALMLGVTVALLVVSVVMVGMLLLTDDGARALGQQL--GLGDTTLVVWAIVKWPLLAALLT 219
Query: 192 GLIFV-HLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
G+I V + P + + + +L G + ++W +G F Y+ T +TY + Y L +++
Sbjct: 220 GIIGVLYAATPNLRRRRVDLLTWGSLVAIVAWGLGTAGFVWYVTTIATYESTYGVLGAVI 279
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L++LY+ + +LG EL+ +I
Sbjct: 280 VLLLWLYIGNLSLVLGGELDVEII 303
>gi|167035062|ref|YP_001670293.1| ribonuclease BN [Pseudomonas putida GB-1]
gi|166861550|gb|ABY99957.1| ribonuclease BN [Pseudomonas putida GB-1]
Length = 319
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL ++ + A + +S GV + ++N AY V E R + +S
Sbjct: 82 NPVIDQLQQS----KGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRPVWKRIPLS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y + + L+ + + V P + ++ + ++ +W R ++ L + +
Sbjct: 138 IFYTVGLAGMLLAAAALMVLGPQVMEWIAAQI-GMQEFIVTLWTILRWPVIIILLMVAVA 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K K I PG + + W+V ++ F +Y+ TF+ Y+ MY + +I+ L++
Sbjct: 197 LIYYVMPDVKQKFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGAIIVLLLY 256
Query: 255 LYMLGVFFILGAELNA 270
Y+ +LGAE+NA
Sbjct: 257 FYISAAVLLLGAEMNA 272
>gi|126699181|ref|YP_001088078.1| putative membrane-associated ribonuclease [Clostridium difficile
630]
gi|115250618|emb|CAJ68442.1| putative membrane-associated ribonuclease BN-like (Rbn)
[Clostridium difficile]
Length = 279
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 135/284 (47%), Gaps = 24/284 (8%)
Query: 8 VFDIIYDAIEHFVEEDGWA----MASHISLSALLSVFPFIVFGANLAGF---LGAHQFVP 60
+F I IE+ + + ++ ++ +S +LS+FPF++F + + L ++++
Sbjct: 1 MFGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHLNKYIA 60
Query: 61 TVIDVV----FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+++ F +I I + L+ LAV S + + S V+A+ +
Sbjct: 61 LFRNMMPEGAFAVLSSIIVSAIDNRNLKFLAV--------SFVLTMWTFSRAVKAIIKGM 112
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
NRAY+V E RS++ ISF + ++ V L+ +S +F+ + Y L + +
Sbjct: 113 NRAYKVKETRSFFKILSISFLFTIMLLV-LIFLSMIFLVYGEKIGYFIFNLVGLDEIFIK 171
Query: 177 IWN-GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
IW+ R ++ + + ++ + P K I PG IF +W + + L+++Y +
Sbjct: 172 IWDILRYTVGIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYY 231
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y +Y +A I+ + ++Y ++G E+N+ + Y+RK
Sbjct: 232 ANYEVIYGSIAEIIVLMTWMYFSSWSIVIGYEVNSRL---YFRK 272
>gi|89891451|ref|ZP_01202956.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
gi|89516225|gb|EAS18887.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
Length = 309
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 17/256 (6%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
A AS IS S +++FPF++F NL F+ F ++ V P A I D+I +
Sbjct: 52 ARASAISYSFFMAIFPFLLFVLNLIPFIPIENFQNEFLEFVIELLPAQ-AVSIFDQIFKE 110
Query: 86 LAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV 144
+A+ GL TI+ +++ F SNGV A+ R++ R ++ IS +L ++
Sbjct: 111 IALQGNTGLLTIAFVSSLIFMSNGVNAVFNGFERSFHTDFNRGFFRQYAISLAVSVLLTI 170
Query: 145 TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR--------IYATMLALFIGLIFV 196
L+IM V + L +RK N++ G I + +F+ +++
Sbjct: 171 FLLIMVIVTGYVEYLLEELRK-----SNIMSETGQGETLVFVRYLIVIILTYIFVAVLYY 225
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+++ SI G T + V+ +VL+ YI F++Y+ +Y + +++ +++++
Sbjct: 226 FGTRDGRQTRFFSI--GASVTTVLIVLLSVLYGVYIDNFTSYNEIYGSIGALLILMIYIW 283
Query: 257 MLGVFFILGAELNASM 272
+ +LG ELNAS+
Sbjct: 284 LNSNILLLGFELNASL 299
>gi|304386338|ref|ZP_07368671.1| YihY family protein [Pediococcus acidilactici DSM 20284]
gi|304327695|gb|EFL94922.1| YihY family protein [Pediococcus acidilactici DSM 20284]
Length = 304
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 116/237 (48%), Gaps = 4/237 (1%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG-LF 94
LLS FP ++ L V TV++ + A PE I IT+ I++ G LF
Sbjct: 42 LLSFFPLVMLLGTLLPLFQIR--VNTVLEYIETAVPETIYN-ITEPIVKDFLGSGNGELF 98
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV 154
+ S + + +S V A + ++NRAY V + ++ I R++SF ++ + ++ F+F
Sbjct: 99 SFSLVMTVFSASQAVAAFQRTVNRAYGVAKYQNPIINRVVSFFLTVVIIAIMAVLVFLFS 158
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
++Y+ +L ++ + T++ LF+GL ++ +P AK + ++PG
Sbjct: 159 FGQTLVSYLTPILNLPTHLFALVGQLKWPVTIVGLFVGLSLLYYLVPNAKIRFKYVIPGT 218
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+F I +V + +F+ Y+ F+ T Y L + + + +L + + G LNA+
Sbjct: 219 VFATIGTMVLSQVFSFYLRIFARSVTSYKTLGTFIAIMFWLNFSAMIIMFGGVLNAT 275
>gi|301383365|ref|ZP_07231783.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato Max13]
Length = 323
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRFPLS 137
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A +L L + +
Sbjct: 138 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIILLLMVAV 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+ ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 196 ALIYYVMPDVKQEFRFITPGSVLAVVVWIFASLAFGFYVKTFADYNAMYGSIGAIIVLLL 255
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 256 YFYISAAVLLLGAEMNA 272
>gi|270290818|ref|ZP_06197042.1| ribonuclease BN family enzyme [Pediococcus acidilactici 7_4]
gi|270280878|gb|EFA26712.1| ribonuclease BN family enzyme [Pediococcus acidilactici 7_4]
Length = 300
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 116/237 (48%), Gaps = 4/237 (1%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG-LF 94
LLS FP ++ L V TV++ + A PE I IT+ I++ G LF
Sbjct: 38 LLSFFPLVMLLGTLLPLFQIR--VNTVLEYIETAVPETIYN-ITEPIVKDFLGSGNGELF 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV 154
+ S + + +S V A + ++NRAY V + ++ I R++SF ++ + ++ F+F
Sbjct: 95 SFSLVMTVFSASQAVAAFQRTVNRAYGVAKYQNPIINRVVSFFLTVVIIAIMAVLVFLFS 154
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
++Y+ +L ++ + T++ LF+GL ++ +P AK + ++PG
Sbjct: 155 FGQTLVSYLTPILNLPTHLFALVGQLKWPVTIVGLFVGLSLLYYLVPNAKIRFKYVIPGT 214
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+F I +V + +F+ Y+ F+ T Y L + + + +L + + G LNA+
Sbjct: 215 VFATIGTMVLSQVFSFYLRIFARSVTSYKTLGTFIAIMFWLNFSAMIIMFGGVLNAT 271
>gi|229494654|ref|ZP_04388414.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
gi|229318447|gb|EEN84308.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
Length = 321
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
++LS+FP ++ +L G G Q V V+ +V P + + + + Q + PA G
Sbjct: 5 SVLSLFPAVLAVVSLLGVFGQGQSTVDAVLQIVSDLGPSSAVETLKEPVQQHVEAPAAGF 64
Query: 94 FTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
I+ +A A +S++G + A +LNR Y V E R + R V + ++ L+ + V
Sbjct: 65 ALIAGIAGALWSASGYLVAFGRALNRMYEVEEGRPVWKLRPTML-LVTVTALALIGCAAV 123
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA--AKSKIMSI 210
+A+ +A G+ L +WN + +L + + + + P + K I
Sbjct: 124 MLAVSGPVARAIGDASGAGDTALTVWNIARWPVVLVFVVLAVAILYYAPPNIQQPKFRWI 183
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
G + W++ +V+F Y+ FS+Y+ Y LA + L++L++ + + GAEL++
Sbjct: 184 SGGAALAIVVWILASVIFGFYVANFSSYNKTYGSLAGAIVFLLWLWITNLALLFGAELDS 243
Query: 271 SM 272
+
Sbjct: 244 EL 245
>gi|330977867|gb|EGH77770.1| ribonuclease BN [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 283
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 99/197 (50%), Gaps = 8/197 (4%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL +I + A + +S GV + ++N AY VVE R + +S
Sbjct: 44 NPVIDQLQQ----SKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRLPLS 99
Query: 136 FGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGL 193
Y + +A + L +F+ + P + ++ + + ++ +W R A ++ L + +
Sbjct: 100 ILYTVGIAGMLLAAAAFMVLG-PQVMNWIAAQI-GMEDFIVTLWTILRWPAIIILLMVAV 157
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K + I PG + + W+ ++ F Y+ TF+ Y+ MY + +I+ L+
Sbjct: 158 ALIYYVMPDVKQEFRFITPGSVLAVVVWIFASLAFGFYVKTFADYNAMYGSIGAIIVLLL 217
Query: 254 FLYMLGVFFILGAELNA 270
+ Y+ +LGAE+NA
Sbjct: 218 YFYISAAVLLLGAEMNA 234
>gi|313675805|ref|YP_004053801.1| ribonuclease bn [Marivirga tractuosa DSM 4126]
gi|312942503|gb|ADR21693.1| ribonuclease BN [Marivirga tractuosa DSM 4126]
Length = 311
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+ + + A++++ L++FP I+F L +L V+ ++ P +
Sbjct: 42 IQELSDHNLIERANNVAFQFTLAIFPTIIFLFTLIPYLPIDNLQQEVMSLLEETMPGSVY 101
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I+ +L+ L ++ + A YF++NG AL + N+ YR + R + + I+
Sbjct: 102 EVAQSTIVDILSKSRGDLLSVGFIFALYFATNGTSALMTAFNQTYRTKDSRGFVKAKAIA 161
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF-IGLI 194
G L + LV + + + ++ F + + I+ G + + LF I +
Sbjct: 162 IGLTFLLAFVLVTSIVLLIVAQQVIYFLEDFGIISDSFEVYIFIGLRFLVIFFLFQIAIS 221
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + PA + PG I + + F+ YI F TY+ +Y + +++ +++
Sbjct: 222 VIYYWAPAIHKRWHFFNPGSILATFLCLAVSFGFSFYINNFGTYNKLYGSIGALIAIMIW 281
Query: 255 LYMLGVFFILGAELNASM 272
L +F I+G +LN S+
Sbjct: 282 FSFLSLFLIVGLQLNVSL 299
>gi|325289968|ref|YP_004266149.1| ribonuclease BN [Syntrophobotulus glycolicus DSM 8271]
gi|324965369|gb|ADY56148.1| ribonuclease BN [Syntrophobotulus glycolicus DSM 8271]
Length = 289
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 121/247 (48%), Gaps = 7/247 (2%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+ + I+ +L+ FPF++F L ++ ++D + P+ + I D + +++
Sbjct: 31 LGAQITYYVILAFFPFLIFLLTLTSYINLADV--NILDDLSHIVPQESYQIIADTLKEIM 88
Query: 87 AVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
+V L ++ LA+ + + NG+ AL +N AY E RS+ + + S ++++ +
Sbjct: 89 SVRRNTTLLSLGFLASLWSALNGIHALMTGMNSAYGKKETRSFLLQKFTSLNFLIVFFLA 148
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
+++SF+ + + L + N++ +W +++ +F+ L F++L A
Sbjct: 149 -IVLSFLLLVLGRELEEFLQILLGNLNMITFLWQ-KLHIVFQFVFLILTFLYLNKLATGK 206
Query: 206 KIM--SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+LPG +F I WVV ++ F+ Y+ F+ YS Y + I+ L++LY +
Sbjct: 207 AFTYGQLLPGSLFAAIGWVVISMGFSLYLKYFNNYSPAYGSIGGIIILLLWLYWSSEMIL 266
Query: 264 LGAELNA 270
G LN+
Sbjct: 267 FGCVLNS 273
>gi|58698244|ref|ZP_00373163.1| ribonuclease BN, probable , putative [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535216|gb|EAL59296.1| ribonuclease BN, probable , putative [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 241
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + I ++++ P + L T++ + A + +S+ +E LR LN+AY+V + +
Sbjct: 42 PQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKAYKVPVSPPYIL 101
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML--- 187
R++S I+ F+ + + + L V F + L+ + G Y L
Sbjct: 102 RRVLS------------ILQFLVITLIITLTIV--FSTLVPMLIDFSYQGLSYTRYLLIE 147
Query: 188 -ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGL 245
LF + +++ LP K + + PG I W + A F Y+ +F +Y L
Sbjct: 148 FVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQLDLIYGSL 207
Query: 246 ASIMTCLVFLYMLGVFFILGAELN 269
++ L+F YML + FI GA+ N
Sbjct: 208 GGVVVSLLFFYMLSLIFIYGAKFN 231
>gi|260587882|ref|ZP_05853795.1| YihY family protein [Blautia hansenii DSM 20583]
gi|331083883|ref|ZP_08332992.1| hypothetical protein HMPREF0992_01916 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542147|gb|EEX22716.1| YihY family protein [Blautia hansenii DSM 20583]
gi|330403308|gb|EGG82868.1| hypothetical protein HMPREF0992_01916 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 303
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E + I +E+ + + G+ +SA+ A + + G++AL N Y+V E R++ ++
Sbjct: 70 ETFIQSIVNEVYE----KSLGVVPVSAVIAMWSAGKGIQALTRGFNSIYQVKETRNFLMS 125
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R+ + Y L+ +++++ + V + FP + ++ +I + R+ T+ AL +
Sbjct: 126 RIRAVFYTLVFVISIILTLTLQVFGNSLQRELSSHFPFMEKIVTMIISMRVVITLSALCV 185
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++ F+P K+ S PG + + W + F+ YI ++ + MY + +I+
Sbjct: 186 VFLMMYKFIPNRKATFRSQFPGALLCAVCWSAFSFGFSLYIDFYNGAANMYGSMTTIVLV 245
Query: 252 LVFLYMLGVFFILGAELN 269
L++LY +F +LGA++N
Sbjct: 246 LLWLYFCMMFVMLGAQVN 263
>gi|153956022|ref|YP_001396787.1| hypothetical protein CKL_3414 [Clostridium kluyveri DSM 555]
gi|219856362|ref|YP_002473484.1| hypothetical protein CKR_3019 [Clostridium kluyveri NBRC 12016]
gi|146348880|gb|EDK35416.1| Hypothetical protein CKL_3414 [Clostridium kluyveri DSM 555]
gi|219570086|dbj|BAH08070.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 275
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 26/270 (9%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
F+E+D A+AS ++ S + S FPF++F ++ G+ PE I +
Sbjct: 17 RFIEDDVLALASQLAYSLIFSFFPFLIFIISIIGYSDISSSNILSSLSYI--LPENILQL 74
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRL 133
I I+++ L S + SS G ++ LN+AY E RS + I+ +
Sbjct: 75 IKTTIIRITDTRDIKLLFSSLALTIWSSSGGFHSVIKGLNKAYNKKESRSVLKIYAISMV 134
Query: 134 ISFGYVLLASVTLVIMSF-----VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ G ++ +T++++ F F+A L + F +WN I+ ++
Sbjct: 135 CTLGITVIIIITILLLVFGQIIGSFLAFNLGFSKEFNF----------MWN--IFRYLMI 182
Query: 189 LFIGL-IF--VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
LF + IF V+ + P K + ++PG F+ + V+ ++ F Y+ F++YS +Y +
Sbjct: 183 LFSTIFIFSAVYRYTPNVKLRWREVMPGAFFSTVGIVIASMGFAFYVNNFASYSIIYGSI 242
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ + + +L++L V ILG E+N+ + I+
Sbjct: 243 GAAIMLMTWLFILSVITILGGEINSVLFIH 272
>gi|225389046|ref|ZP_03758770.1| hypothetical protein CLOSTASPAR_02791 [Clostridium asparagiforme
DSM 15981]
gi|225044891|gb|EEG55137.1| hypothetical protein CLOSTASPAR_02791 [Clostridium asparagiforme
DSM 15981]
Length = 280
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 130/272 (47%), Gaps = 30/272 (11%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV--------- 62
IYD F ++ A+ S +++ FPFI+ L Q VP+V
Sbjct: 11 IYD---KFAADEMTVYAAQASFFTIIAAFPFIML------LLTVVQIVPSVSQGELMEFI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +V + V + I+D L+ PA + +++A+ A + SS G+ ++ LNR
Sbjct: 62 LALVPVGYKSVAFRVISDLSLKS---PAT-MISVTAVTALWSSSRGMMSIAKGLNRVQGK 117
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
VE R + + RLI GY ++ + V+ + V +V + FP + + I + R
Sbjct: 118 VEKRWYIVKRLICAGYTIVFILVCVLSLGLLVFGTTIQNFVLRQFPLIARVTQHIISLR- 176
Query: 183 YATMLAL-FIGLIF--VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF--ST 237
T+LAL F +F ++ ++P K + S LPG +FT W++ ++ F+ Y F S
Sbjct: 177 --TLLALAFFMFVFAGIYTYVPDRKLSLKSQLPGAMFTTAGWILFSMAFSLYFKLFGGSN 234
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+S MY L +I+ +++LY GAELN
Sbjct: 235 FSYMYGSLTAIVLLMLWLYGCICVLFFGAELN 266
>gi|124007383|ref|ZP_01692090.1| ribonuclease BN [Microscilla marina ATCC 23134]
gi|123987216|gb|EAY26956.1| ribonuclease BN [Microscilla marina ATCC 23134]
Length = 370
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 39/280 (13%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI----DVVFGAW----------- 70
A I+ S LS+FP I+F L F FVP ++ D+V
Sbjct: 52 QQARAIAFSFTLSLFPAIIFLFTLIPF-----FVPYIVTYIPDIVTTGQDIDMKQQIDAL 106
Query: 71 -----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P I K D I+ +L P L + L A Y ++NGV + + NR Y+ E
Sbjct: 107 LLEFMPGEIYKYTHDTIVNILTQPRTNLLSFGVLLALYTATNGVIEMMDTFNRNYKFAEK 166
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF------------PALGNL 173
R++ RL++ G +L + LVI+ V V A+ +V ++ LG
Sbjct: 167 RNFLRKRLLAAGLAILFAFILVIVVIVLVVTEFAVEFVLEYLYEWTSWAMLHKDQVLGYY 226
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
LL + +++ A +G+ ++ PA K + G I I ++ F+ Y+
Sbjct: 227 LLTGF--KVFVLFSAFLLGIALIYNLAPARKKEWRFFSLGAISASILAMLSTTGFSFYLS 284
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
F+ Y+ +Y + +++ + +LY++ F+LG E+N SM+
Sbjct: 285 NFANYNKLYGSIGTLIALMFWLYLIAWVFLLGFEINVSMV 324
>gi|108803594|ref|YP_643531.1| ribonuclease BN [Rubrobacter xylanophilus DSM 9941]
gi|108764837|gb|ABG03719.1| ribonuclease BN, putative [Rubrobacter xylanophilus DSM 9941]
Length = 328
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+E +D MA+ ++ +L++FPF++ +L G + + V+ P+ +
Sbjct: 45 VEKLQRDDAAGMAAQLAYYLILALFPFMLVLVSLMGTFSSPELAEEVLAYFRQVLPQQVY 104
Query: 76 KPITDEILQVL--AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I V+ PA GL + L + +S AL +LN AY V E R ++ R
Sbjct: 105 ALIATYTGDVIRGEHPAPGLLSFGILLTLWSASGAFNALIKALNAAYEVQETRPFWKVRA 164
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIG 192
++ G L S + + + V P + +FF LG + WN R +L L +
Sbjct: 165 LAVGMTLGLSGLIFLGVLLMVFGPPIGEAIARFF-GLGTVFEAAWNVARWPVALLFLVVT 223
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ PA I PG + + WVV + F+ Y+ F +Y+ Y + + L
Sbjct: 224 VALIYYLAPAVDQPFRWITPGGLVAVLLWVVASAAFSFYVNNFGSYNKTYGSIGVAIVLL 283
Query: 253 VFLYMLGVFFILGAELNASM 272
++LY+ + + GA LNA++
Sbjct: 284 LYLYISSLTILFGAALNATL 303
>gi|319650226|ref|ZP_08004372.1| hypothetical protein HMPREF1013_00977 [Bacillus sp. 2_A_57_CT2]
gi|317398057|gb|EFV78749.1| hypothetical protein HMPREF1013_00977 [Bacillus sp. 2_A_57_CT2]
Length = 300
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 2/254 (0%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ F ++ +A+ + +LS+FP ++ ++ +L + + P
Sbjct: 13 KEFKKDRATGLAAEQAYYYMLSIFPLLILLISIVPYLSLDP--QKALSYLQSVMPSDSFN 70
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I D ++ ++ P GL T + + +SNG++A ++N A+ V E RS+ +RLIS
Sbjct: 71 VIEDNVVDIITKPNGGLLTFGIIGTLWSASNGMQAFIRAMNDAFDVEETRSFIKSRLISI 130
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
G L +I + V + + +V F + ++I R + + L +
Sbjct: 131 GLTLGLLAAFIIAMVLPVFGKVIMNFVENFINIPDGMQILINVLRWAIAFVIMVTVLAIL 190
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +LPG I + W + + + Y+ F YS Y L ++ +++ +
Sbjct: 191 YKVAPNKHFPFKQVLPGAIAATVMWQLISFGLSFYVSNFGNYSATYGSLGGVIVLMLWFF 250
Query: 257 MLGVFFILGAELNA 270
+ G+ ++G E++A
Sbjct: 251 LTGLALVIGGEISA 264
>gi|229492024|ref|ZP_04385838.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
gi|229321048|gb|EEN86855.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
Length = 516
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 5/266 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
++ F + +A+ ++ A+LS+FP I+ +L G G Q V V+ +V
Sbjct: 33 VLRSTARQFSRDQCTDLAAALTYYAVLSLFPAILAVVSLLGVFGQGQSTVDAVLQIVGAL 92
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P + I Q++ PA G I+ +A A +S++G V A ++NR Y V E R
Sbjct: 93 GPSSAVDTLRGPIQQLVQAPAAGFALIAGIAGALWSASGYVGAFGRAMNRMYEVDEGRPV 152
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATML 187
+ R + V + ++TL+ + +AI +A G+ L +WN R ++
Sbjct: 153 WKLRPVML-LVTIVALTLIGCAAAMLAISGPVARAIGDVIGAGDTALTVWNIARWPVVLV 211
Query: 188 ALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + ++ P + K I G + W++ +V F Y+ FS+Y+ Y LA
Sbjct: 212 FVVLAVAILYYATPNIQQPKFRWISGGAALAIVVWILASVGFGFYVANFSSYNKTYGSLA 271
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
+ L++L++ + + GAEL++ +
Sbjct: 272 GAIVFLLWLWITNLALLFGAELDSEL 297
>gi|148546571|ref|YP_001266673.1| putative ribonuclease BN [Pseudomonas putida F1]
gi|148510629|gb|ABQ77489.1| putative ribonuclease BN [Pseudomonas putida F1]
Length = 318
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL ++ + A + +S GV + ++N AY V E R + +S
Sbjct: 82 NPVIDQLQQS----KGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRPVWKRIPLS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y + + L+ + + V P + ++ + ++ +W R ++ L + +
Sbjct: 138 IFYTVGLAGMLLAAAALMVLGPQVMEWIAAQI-GMQEFIVTLWTILRWPVIIILLMVAVA 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K + I PG + + W+V ++ F +Y+ TF+ Y+ MY + +I+ L++
Sbjct: 197 LIYYVMPDVKQQFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGAIIVLLLY 256
Query: 255 LYMLGVFFILGAELNA 270
Y+ +LGAE+NA
Sbjct: 257 FYISAAVLLLGAEMNA 272
>gi|26991244|ref|NP_746669.1| ribonuclease BN, putative [Pseudomonas putida KT2440]
gi|24986297|gb|AAN70133.1|AE016653_4 ribonuclease BN, putative [Pseudomonas putida KT2440]
Length = 318
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL ++ + A + +S GV + ++N AY V E R + +S
Sbjct: 82 NPVIDQLQQS----KGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVSEGRPVWKRIPLS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y + + L+ + + V P + ++ + ++ +W R ++ L + +
Sbjct: 138 IFYTVGLAGMLLAAAALMVLGPQVMEWIAAQI-GMQEFIVTLWTILRWPVIIILLMVAVA 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K + I PG + + W+V ++ F +Y+ TF+ Y+ MY + +I+ L++
Sbjct: 197 LIYYVMPDVKQQFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGAIIVLLLY 256
Query: 255 LYMLGVFFILGAELNA 270
Y+ +LGAE+NA
Sbjct: 257 FYISAAVLLLGAEMNA 272
>gi|326800466|ref|YP_004318285.1| ribonuclease BN [Sphingobacterium sp. 21]
gi|326551230|gb|ADZ79615.1| ribonuclease BN [Sphingobacterium sp. 21]
Length = 329
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 11/263 (4%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGAWPEVI 74
+ E AS ++ S +L++FP I+F L ++ F +++ + PE
Sbjct: 43 QEIARESLLNKASSLAYSFMLAIFPGIIFLFTLIPYIKVFIDDFQEQLLEFMQMILPENA 102
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
K I +L ++ GL + L A F++NG+ +L + N++ V+E RS+ RL+
Sbjct: 103 YKTIESTLLDIVTNQNSGLLSFGFLMAMIFATNGIHSLMRAFNKSSLVLESRSFVKQRLV 162
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ ++ + L I + + +++ G W I T + +G+
Sbjct: 163 ALALAIMIIMALTIGMGIVTLASFIINHLKNTIEITGGF----WTWLIGITRWIILLGIY 218
Query: 195 FVHL-----FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F L + P++ K PG + + F YI F+TY+ +Y + +++
Sbjct: 219 FFTLSILYKYGPSSSRKWSFFSPGATLATVLAALTFWGFAFYINNFNTYNKLYGSIGTLI 278
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
+++LY+ + ++G ELNAS+
Sbjct: 279 VIMIWLYLNSLILLIGFELNASI 301
>gi|229918098|ref|YP_002886744.1| ribonuclease BN [Exiguobacterium sp. AT1b]
gi|229469527|gb|ACQ71299.1| ribonuclease BN [Exiguobacterium sp. AT1b]
Length = 317
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 10/269 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGAWPEVI 74
F E D + ++ LS+FP I+F L F Q F + D+ P
Sbjct: 21 RRFQEHDVQDYGATLAFFWFLSIFPGIIFILALLSFFDVSQDSFQNQLNDLA----PGSA 76
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A I + + P GL ++ A+ A + ++ GV+ L + AY R++++ + +
Sbjct: 77 ASGFLTGIFEAIGEPRGGLLSLGAILAIWSAAKGVDRLITTSLHAYGEDNERNFFVKKGL 136
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGRIYATMLALFIG 192
+ G +L + ++++ V +++V ++ P G ++I R T + L +
Sbjct: 137 ALGLTILLGIGMLLLILSNVFGSQIISFVTEYLPVNITGAEEMMINVFRYVLTTVVLILT 196
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L + P S +PG IF I W + + F+ Y+ F +Y + Y L I+ L
Sbjct: 197 LSIFYKVSPQQHVFWKSTIPGAIFGVIGWQIVSFGFSLYVSNFGSYDSTYGSLGGIIVTL 256
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKKP 281
++L + G+ ++G+E+NA+ + ++ K P
Sbjct: 257 LWLQLTGMIILIGSEINATWMRFF--KTP 283
>gi|329569816|gb|EGG51575.1| YihY family protein [Enterococcus faecalis TX1467]
Length = 302
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 115/225 (51%), Gaps = 4/225 (1%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+V+ + A P+ + K + I +L + GL ++SALAA +S + AL+ ++N+A+
Sbjct: 64 SVLPYIAEAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFCSASQSINALQNAMNKAF 123
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + +++ + R++SF +LL V +V ++ + + ++ F +++
Sbjct: 124 GVEQRKNFILVRVVSFLVILLFMVAIVGVAVILGLGQYIIELLQHLFHYSTSVIDTFQAL 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T + L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+
Sbjct: 184 KWPLTTVVLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIA 243
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY----YWRKKP 281
Y + S + +++L ILGA +NA + Y +K+P
Sbjct: 244 SYQIIGSFIILMLWLNFAATIIILGAIVNAVVDEYLSGDKEKKQP 288
>gi|284036533|ref|YP_003386463.1| ribonuclease BN [Spirosoma linguale DSM 74]
gi|283815826|gb|ADB37664.1| ribonuclease BN [Spirosoma linguale DSM 74]
Length = 318
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
++ + + A+ +S S +L+VFP ++F L F+ F+P + + + G + EV+
Sbjct: 38 LDQITDNNTSERAASVSYSLILAVFPTVIFFFTLIPFI---TFIPNLEEQIMGFFREVLP 94
Query: 76 ----KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I +++ P G+ + L A Y +++G+ AL + N +Y E R ++
Sbjct: 95 GNTFSSVDTTIRDIVSRPRSGVLSFGFLLALYSATSGLVALMQAFNSSYHSDERRGFFKV 154
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-IWNGRIYATMLALF 190
RL++ G + L++ V + + Y+ F L N L I + Y + A+F
Sbjct: 155 RLVAIGLTFTLAFALILAIVVLIIGGIISDYLLHF-GLLNNALFINLLAITRYLVVFAVF 213
Query: 191 IGLIFV-HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+G + V + + P + K + I PG + + V+ + F++Y+ F +Y+ +Y + +++
Sbjct: 214 VGTVSVIYRYGPDVRMKWVFITPGAVTASLLIVLTTLGFSYYVSNFGSYNKVYGSIGTLI 273
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++++ ++ + ILG E+N ++ + P
Sbjct: 274 ALMIWINLISLLLILGFEMNVALYNLEGDRSP 305
>gi|210616176|ref|ZP_03290977.1| hypothetical protein CLONEX_03196 [Clostridium nexile DSM 1787]
gi|210149905|gb|EEA80914.1| hypothetical protein CLONEX_03196 [Clostridium nexile DSM 1787]
Length = 273
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ V+ +P+ I + + +V ++ + ++AL + + GV A+ LN +
Sbjct: 56 VMTAVYEVFPKTIRATMISIVNEVYN-QSRAVIPLTALMTMWSAGRGVLAITNGLNCIHE 114
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLIIWNG 180
+E R++ R+ + Y +L + +V +S V + +++ +V + P + I
Sbjct: 115 EIETRNYIFLRIRAAFYTVLFIIAIV-LSLVLLGFGNSISMFVNEHVPIFRYVTDFIIEI 173
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R T+L L + ++ FLP K KI PG +FT W + + +F+ Y+ F +S
Sbjct: 174 RTVTTLLVLIVFSTCIYRFLPNHKGKIKYQFPGAVFTAFGWTLASFIFSVYMDIFKGFSN 233
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELN 269
MY L +I+ +++LY +LG E+N
Sbjct: 234 MYGSLTTIVLIMLWLYFCMYVMLLGGEIN 262
>gi|299143561|ref|ZP_07036641.1| YihY family protein [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518046|gb|EFI41785.1| YihY family protein [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 311
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 142/282 (50%), Gaps = 21/282 (7%)
Query: 1 MREYFCIVFD-IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+ + + I FD +Y EH + E ++A + +LS+FPF++ N+ F +
Sbjct: 13 LNKNYVIFFDKFLYRFAEHRIVEISASLAYFL----ILSIFPFLIALLNIINFTN-FLYS 67
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I+ + PE I K + I ++ + + LF+IS L + +SNG + + ++N A
Sbjct: 68 DNIIEAL-SYLPEDITKIAMNFIKEIYSGSSGSLFSISVLLGLWSASNGFKKIIKNINLA 126
Query: 120 YRVVEMRSWYITRLIS--FGYVLLASVTLVIMSFVF--VAIPLALAYVRKFFPALGNLLL 175
Y E R T+L+S F L+ + L++++ VF I + + YV LG +
Sbjct: 127 YGFSEKRGILKTKLLSLLFTIALIIMILLLLLTQVFGETIINMLINYV-----GLGEDIT 181
Query: 176 IIWNGRIYAT-MLALFIGLIFVHLFLPAAKS----KIMSILPGVIFTWISWVVGAVLFTH 230
+W+ + + +FI + V+ + P + K ILPG IF+ IS V LF +
Sbjct: 182 YLWHILSFIIPFIYMFITFLLVYKYSPGTDTRDLLKFSLILPGAIFSTISSVFATNLFGY 241
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ F+ YS Y L I+ L++L+++ + ++G E+NA++
Sbjct: 242 YVGNFAKYSVTYGSLGGIIILLIWLWLMSMIILMGGEINATL 283
>gi|269125476|ref|YP_003298846.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
gi|268310434|gb|ACY96808.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
Length = 445
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 133/271 (49%), Gaps = 15/271 (5%)
Query: 10 DIIYDAIEHFVEED--GWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVID 64
D++ F E++ WA A ++ A+LS+FP ++ +L G GA + V D
Sbjct: 140 DLLKRTFREFKEDNLTDWAAA--LTYYAVLSIFPAMLVIISLIGLGGASLSESIIRNVGD 197
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVV 123
+ GA +V+A +T+ LQ A A GL + L AA +S++G V A + N Y +
Sbjct: 198 LAPGAVRDVLATALTE--LQRGAG-AAGLVAVIGLVAAVWSASGYVAAFMRASNAIYDLP 254
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + T I V L S+TL+ S + V I LA LG+ + +WN +
Sbjct: 255 EGRPIWKTLPIRIA-VTLVSLTLLSASAIAVVISGPLARKAGDLLGLGDAAVTVWNIAKW 313
Query: 184 ATMLALFIGLIFVHLF--LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + I +F L+ P AK + PG + W++ +V F Y+ F +Y+
Sbjct: 314 PVLL-VAIAFLFALLYWASPNAKRGFTWVTPGGLLALAVWLLASVGFAFYVANFGSYNKT 372
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y LA ++ LV+L++ + +LG ELNA +
Sbjct: 373 YGSLAGVIIFLVWLWISNIALLLGVELNAEL 403
>gi|115525638|ref|YP_782549.1| putative ribonuclease BN [Rhodopseudomonas palustris BisA53]
gi|115519585|gb|ABJ07569.1| putative ribonuclease BN [Rhodopseudomonas palustris BisA53]
Length = 370
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 130/272 (47%), Gaps = 18/272 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DII+ E ++ A+A+ + LL++FP I + + Q + + + G
Sbjct: 76 DIIWRTYEQINDDRLLAVAAGVVFYGLLALFPAITALVSSYALVADPQTIRDHLSFLAGV 135
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISA-----LAAAYFSSNG-VEALRISLNRAYRVV 123
P + D+I +VLA KG + A A A +S+NG ++A+ +LN Y
Sbjct: 136 LPAGTFSVVEDQIARVLA---KGEVKLGAAFLFSFALALWSANGGMKAIIDALNVVYDEE 192
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + +S + L + ++ + VA P+ L+ V +G+LLL GR
Sbjct: 193 EKRGFIKLNAVSLAFTLGGLLAVLAAIGLVVAAPILLSMV--GLGTIGDLLLRF--GRWP 248
Query: 184 ATMLALFIGLIFVHLFLPAAKS---KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A + + GL ++ F P+ +S K +S+ G + + W+VG+ ++Y+ + Y
Sbjct: 249 ALAVMILAGLAVLYRFAPSRRSPQWKWISV--GSVSATVIWLVGSAALSYYLANYGAYDA 306
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L + + +++++M + +LGAELN+ +
Sbjct: 307 TYGSLGAAIGLMIWMWMSTIVVLLGAELNSEI 338
>gi|325277884|ref|ZP_08143430.1| ribonuclease BN [Pseudomonas sp. TJI-51]
gi|324096987|gb|EGB95287.1| ribonuclease BN [Pseudomonas sp. TJI-51]
Length = 319
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL ++ + A + +S GV + ++N AY V E R + +S
Sbjct: 82 NPVIDQLQQS----KGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRPVWKRIPLS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLI 194
Y + + L+ + + V P + ++ + ++ +W R + L + +
Sbjct: 138 IFYTVGLAGMLLAAAALMVLGPQVMEWIAAQI-GMQEFIVTLWTVLRWPVIVFLLMVAVA 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K K I PG + + W++ ++ F +Y+ TF+ Y+ MY + +I+ L++
Sbjct: 197 LIYYVMPDVKQKFRFITPGSVLAVVVWIIASLGFAYYVKTFADYNAMYGSIGAIIVLLLY 256
Query: 255 LYMLGVFFILGAELNA 270
Y+ +LGAE+NA
Sbjct: 257 FYISAAVLLLGAEMNA 272
>gi|88803358|ref|ZP_01118884.1| Ribonuclease BN [Polaribacter irgensii 23-P]
gi|88780924|gb|EAR12103.1| Ribonuclease BN [Polaribacter irgensii 23-P]
Length = 313
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 135/283 (47%), Gaps = 25/283 (8%)
Query: 12 IYDAIEHF----VEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVID 64
+YD +E + VE A I+ S +++FPF++F L FL GA + + ++I
Sbjct: 35 LYDILEMYFIGIVEGALSTRAGGIAYSFFMAIFPFLLFVLTLIPFLPIEGAQEGLLSIIS 94
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
V P + +L ++ GL + + + + SNGV A+ +Y + E
Sbjct: 95 DVL---PPKTFDAVHAVLLDIIKNQYGGLLSFGFIGSIFLMSNGVNAIFGGFEYSYHIKE 151
Query: 125 MRSWYITRLISF------GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LII 177
R+ + I+ ++ ++TL+I +F+ ++L ++ NL+ L +
Sbjct: 152 ARNIFKAYFIAMLVSVVIVIFVIVAITLIIFFDLFLLDMVSLGWLND------NLIWLQL 205
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G I+ ML L + +++ + +S S PG +FT I ++ LF +Y+ F+
Sbjct: 206 GRGLIFLIMLHLTVSMLYHYGVKEGKQSGFFS--PGAVFTTILSILTFYLFGYYVTEFAK 263
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y+ +Y + +++ ++F+++ + +LG ELNA++ R K
Sbjct: 264 YNELYGSIGTLLILMLFIWLNAIILLLGFELNAAIYALRGRNK 306
>gi|291522420|emb|CBK80713.1| Predicted membrane protein [Coprococcus catus GD/7]
Length = 282
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 18/257 (7%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
E+ A AS + +LS FPF +F L ++ P + + + K D
Sbjct: 17 EDHLGAYASQAAFFIVLSAFPFCIF------LLTLLRYSPLTYEDLLNILQMLSPKMAND 70
Query: 81 EILQVLAVPAKGLFTISALAAAYFS--------SNGVEALRISLNRAYRVVEMRSWYITR 132
I V+ K ++ S +A F+ G+ ++ +N Y + E R+++ R
Sbjct: 71 VIRLVM----KEVYEQSTIAITSFTIIFVLWSAGRGILSITRGINEIYHINETRNYFYIR 126
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
IS Y L +V L++ + V + V K P L + + R+ L +
Sbjct: 127 FISAVYTLWLAVALIVTLGLLVFGNVFYRKVIKLLPVLHEFAAFVISIRMLIIFGLLTMF 186
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
IFV+ LP K+ ++ +LPG I I W++ + +F Y ++ MY LA IM +
Sbjct: 187 FIFVYKVLPNKKTPLLYVLPGAISCSIGWMITSSIFAIYFNYSHSFIYMYGSLAGIMMIM 246
Query: 253 VFLYMLGVFFILGAELN 269
++LY LGAELN
Sbjct: 247 LWLYTCMYQLFLGAELN 263
>gi|307303461|ref|ZP_07583215.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
gi|306902852|gb|EFN33444.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
Length = 328
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 125/267 (46%), Gaps = 10/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + + E+ +A+ ++ LLSVFP + ++ G + + ++
Sbjct: 36 DVFWRVVSQISEDRISLIAAGVTFYVLLSVFPALASLVSIYGLVSDPATIAEQATLLAAV 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +TD++ + + L F L A + + NGV AL ++N AY E R
Sbjct: 96 LPAQSLQMMTDQLETLSSQKTSSLSFGFIAGLLFALWSARNGVGALFEAMNIAYDETEKR 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+S G+ L + ++ +P LA++ L L + W +
Sbjct: 156 SFIRLTLLSIGFTLAGLILTAVLIAAIAVLPAVLAFLHLELEGL--LRFVRWP----VML 209
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + G+ ++ + P+ + +S L G + I W+V ++ F++YI F+ Y+ Y L
Sbjct: 210 LLIAAGITLIYRYGPSREPAKLSWLTWGAALSTICWLVASLAFSYYIDNFANYNATYGAL 269
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
+++ ++++++ + I+GAELNA +
Sbjct: 270 GALIGFMLWIWISTMIVIIGAELNAEL 296
>gi|260662842|ref|ZP_05863736.1| ribonuclease BN [Lactobacillus fermentum 28-3-CHN]
gi|260552923|gb|EEX25922.1| ribonuclease BN [Lactobacillus fermentum 28-3-CHN]
Length = 299
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 128/258 (49%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
EHF A+ ++ LLS+FP ++ NL LG TV+ + A P + +
Sbjct: 18 EHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLD--AKTVLPYLQSAIPSSVYQ 75
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I L + G+ T AL A + +S G+ A + S+N AY V + ++ I R++SF
Sbjct: 76 FIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAYGVAKNQNPIINRVLSF 135
Query: 137 GYVLLASV---TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++++ + LVIM + + AL + F P N + + + R T LFI L
Sbjct: 136 IWMIIVIMIIFALVIMYGLGEQVLEALQPILHF-PI--NYVTLFSSLRWPVTFGGLFIFL 192
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F+P A+ ++ ++ G + + W+ + LF++Y V F+ Y + + + ++
Sbjct: 193 TLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLNSYKTIGAFILMMM 252
Query: 254 FLYMLGVFFILGAELNAS 271
+L G+ ++GA +NA+
Sbjct: 253 WLDFSGMIVMIGAIVNAT 270
>gi|319948212|ref|ZP_08022371.1| TRNA processing ribonuclease BN [Dietzia cinnamea P4]
gi|319438147|gb|EFV93108.1| TRNA processing ribonuclease BN [Dietzia cinnamea P4]
Length = 357
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAW 70
I A+ F + +A+ ++ A+LS+FP ++ +L G G Q V V++++ GA
Sbjct: 38 IKRALSEFSRDKCTDLAASLTYFAVLSLFPALLAVVSLLGVFGQGQATVDAVMELLEGAA 97
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS-W 128
PE + I V+ PA G+ I+ LA A +S++G V A ++NR Y + E R W
Sbjct: 98 PEETLAALRGPIESVVNTPAAGIALITGLAGALWSASGYVGAFGRAMNRIYEIEEGRPFW 157
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATML 187
+ + +L + + + V+ P+A + LG + +W + +L
Sbjct: 158 KLKPVTVLLTAVLLLLVCLAGLILVVSGPIA-EWAGNLI-GLGETAVTVWGIAKWPVLVL 215
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F P K K I G + I W V F Y+ FS+Y+ Y LA
Sbjct: 216 VVVVILAVLYGFAPNVKQPKFRWISIGAVIALIVWAVATGGFVFYVTNFSSYNATYGSLA 275
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
++ L++L++ + GAE++A +
Sbjct: 276 GVIIFLLWLWITNNALLFGAEVDAEV 301
>gi|256961436|ref|ZP_05565607.1| ribonuclease BN [Enterococcus faecalis Merz96]
gi|257084723|ref|ZP_05579084.1| ribonuclease BN [Enterococcus faecalis Fly1]
gi|256951932|gb|EEU68564.1| ribonuclease BN [Enterococcus faecalis Merz96]
gi|256992753|gb|EEU80055.1| ribonuclease BN [Enterococcus faecalis Fly1]
Length = 304
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 109/210 (51%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+V+ + A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+
Sbjct: 65 SVLPYIAEAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAF 124
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + +++ + R++SF +LL V +V + + + ++ F +++
Sbjct: 125 GVEQRKNFILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQAL 184
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T + L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+
Sbjct: 185 KWPLTTVVLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIA 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y + S + +++L ILGA +NA
Sbjct: 245 SYQIIGSFIILMLWLNFAATIIILGAIVNA 274
>gi|3608389|gb|AAC35915.1| Orfde2 [Enterococcus faecalis OG1RF]
Length = 302
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 109/210 (51%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+V+ + A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+
Sbjct: 64 SVLPYIAEAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAF 123
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + +++ + R++SF +LL V +V + + + ++ F +++
Sbjct: 124 GVEQRKNFILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQAL 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T + L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+
Sbjct: 184 KWPLTTVVLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIA 243
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y + S + +++L ILGA +NA
Sbjct: 244 SYQIIGSFIILMLWLNFAATIIILGAIVNA 273
>gi|255972225|ref|ZP_05422811.1| ribonuclease BN [Enterococcus faecalis T1]
gi|255975337|ref|ZP_05425923.1| ribonuclease BN [Enterococcus faecalis T2]
gi|256617227|ref|ZP_05474073.1| ribonuclease BN [Enterococcus faecalis ATCC 4200]
gi|256763001|ref|ZP_05503581.1| ribonuclease BN [Enterococcus faecalis T3]
gi|256853649|ref|ZP_05559014.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256956586|ref|ZP_05560757.1| ribonuclease BN [Enterococcus faecalis DS5]
gi|256963474|ref|ZP_05567645.1| ribonuclease BN [Enterococcus faecalis HIP11704]
gi|257079512|ref|ZP_05573873.1| ribonuclease BN [Enterococcus faecalis JH1]
gi|257082108|ref|ZP_05576469.1| ribonuclease BN [Enterococcus faecalis E1Sol]
gi|257087331|ref|ZP_05581692.1| ribonuclease BN [Enterococcus faecalis D6]
gi|257090465|ref|ZP_05584826.1| ribonuclease BN [Enterococcus faecalis CH188]
gi|257416512|ref|ZP_05593506.1| ribonuclease BN [Enterococcus faecalis AR01/DG]
gi|257419753|ref|ZP_05596747.1| ribonuclease BN [Enterococcus faecalis T11]
gi|257422087|ref|ZP_05599077.1| ribonuclease BN [Enterococcus faecalis X98]
gi|255963243|gb|EET95719.1| ribonuclease BN [Enterococcus faecalis T1]
gi|255968209|gb|EET98831.1| ribonuclease BN [Enterococcus faecalis T2]
gi|256596754|gb|EEU15930.1| ribonuclease BN [Enterococcus faecalis ATCC 4200]
gi|256684252|gb|EEU23947.1| ribonuclease BN [Enterococcus faecalis T3]
gi|256710592|gb|EEU25635.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256947082|gb|EEU63714.1| ribonuclease BN [Enterococcus faecalis DS5]
gi|256953970|gb|EEU70602.1| ribonuclease BN [Enterococcus faecalis HIP11704]
gi|256987542|gb|EEU74844.1| ribonuclease BN [Enterococcus faecalis JH1]
gi|256990138|gb|EEU77440.1| ribonuclease BN [Enterococcus faecalis E1Sol]
gi|256995361|gb|EEU82663.1| ribonuclease BN [Enterococcus faecalis D6]
gi|256999277|gb|EEU85797.1| ribonuclease BN [Enterococcus faecalis CH188]
gi|257158340|gb|EEU88300.1| ribonuclease BN [Enterococcus faecalis ARO1/DG]
gi|257161581|gb|EEU91541.1| ribonuclease BN [Enterococcus faecalis T11]
gi|257163911|gb|EEU93871.1| ribonuclease BN [Enterococcus faecalis X98]
Length = 303
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 109/210 (51%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+V+ + A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+
Sbjct: 65 SVLPYIAEAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAF 124
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + +++ + R++SF +LL V +V + + + ++ F +++
Sbjct: 125 GVEQRKNFILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQAL 184
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T + L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+
Sbjct: 185 KWPLTTVVLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIA 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y + S + +++L ILGA +NA
Sbjct: 245 SYQIIGSFIILMLWLNFAATIIILGAIVNA 274
>gi|229545287|ref|ZP_04434012.1| ribonuclease BN [Enterococcus faecalis TX1322]
gi|293382826|ref|ZP_06628747.1| YihY family protein [Enterococcus faecalis R712]
gi|293387965|ref|ZP_06632498.1| YihY family protein [Enterococcus faecalis S613]
gi|312901455|ref|ZP_07760730.1| YihY family protein [Enterococcus faecalis TX0470]
gi|312905909|ref|ZP_07764923.1| YihY family protein [Enterococcus faecalis DAPTO 512]
gi|312908943|ref|ZP_07767806.1| YihY family protein [Enterococcus faecalis DAPTO 516]
gi|229309637|gb|EEN75624.1| ribonuclease BN [Enterococcus faecalis TX1322]
gi|291079817|gb|EFE17181.1| YihY family protein [Enterococcus faecalis R712]
gi|291082621|gb|EFE19584.1| YihY family protein [Enterococcus faecalis S613]
gi|310628076|gb|EFQ11359.1| YihY family protein [Enterococcus faecalis DAPTO 512]
gi|311290727|gb|EFQ69283.1| YihY family protein [Enterococcus faecalis DAPTO 516]
gi|311291444|gb|EFQ70000.1| YihY family protein [Enterococcus faecalis TX0470]
gi|315161842|gb|EFU05859.1| YihY family protein [Enterococcus faecalis TX0645]
gi|315173054|gb|EFU17071.1| YihY family protein [Enterococcus faecalis TX1346]
Length = 303
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 109/210 (51%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+V+ + A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+
Sbjct: 64 SVLPYIAEAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAF 123
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + +++ + R++SF +LL V +V + + + ++ F +++
Sbjct: 124 GVEQRKNFILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQAL 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T + L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+
Sbjct: 184 KWPLTTVVLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIA 243
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y + S + +++L ILGA +NA
Sbjct: 244 SYQIIGSFIILMLWLNFAATIIILGAIVNA 273
>gi|29376707|ref|NP_815861.1| ribonuclease BN, putative [Enterococcus faecalis V583]
gi|227520254|ref|ZP_03950303.1| ribonuclease BN [Enterococcus faecalis TX0104]
gi|227555312|ref|ZP_03985359.1| ribonuclease BN [Enterococcus faecalis HH22]
gi|229549522|ref|ZP_04438247.1| ribonuclease BN [Enterococcus faecalis ATCC 29200]
gi|294779051|ref|ZP_06744464.1| YihY family protein [Enterococcus faecalis PC1.1]
gi|300861102|ref|ZP_07107189.1| YihY family protein [Enterococcus faecalis TUSoD Ef11]
gi|307270373|ref|ZP_07551678.1| YihY family protein [Enterococcus faecalis TX4248]
gi|307272381|ref|ZP_07553637.1| YihY family protein [Enterococcus faecalis TX0855]
gi|307277271|ref|ZP_07558375.1| YihY family protein [Enterococcus faecalis TX2134]
gi|307281885|ref|ZP_07562100.1| YihY family protein [Enterococcus faecalis TX0860]
gi|307292424|ref|ZP_07572280.1| YihY family protein [Enterococcus faecalis TX0411]
gi|312903787|ref|ZP_07762960.1| YihY family protein [Enterococcus faecalis TX0635]
gi|312953341|ref|ZP_07772183.1| YihY family protein [Enterococcus faecalis TX0102]
gi|29344171|gb|AAO81931.1| ribonuclease BN, putative [Enterococcus faecalis V583]
gi|227072333|gb|EEI10296.1| ribonuclease BN [Enterococcus faecalis TX0104]
gi|227175523|gb|EEI56495.1| ribonuclease BN [Enterococcus faecalis HH22]
gi|229305340|gb|EEN71336.1| ribonuclease BN [Enterococcus faecalis ATCC 29200]
gi|294453881|gb|EFG22270.1| YihY family protein [Enterococcus faecalis PC1.1]
gi|295113362|emb|CBL31999.1| Predicted membrane protein [Enterococcus sp. 7L76]
gi|300850141|gb|EFK77891.1| YihY family protein [Enterococcus faecalis TUSoD Ef11]
gi|306496553|gb|EFM66114.1| YihY family protein [Enterococcus faecalis TX0411]
gi|306503839|gb|EFM73061.1| YihY family protein [Enterococcus faecalis TX0860]
gi|306506201|gb|EFM75367.1| YihY family protein [Enterococcus faecalis TX2134]
gi|306510935|gb|EFM79949.1| YihY family protein [Enterococcus faecalis TX0855]
gi|306513281|gb|EFM81908.1| YihY family protein [Enterococcus faecalis TX4248]
gi|310628729|gb|EFQ12012.1| YihY family protein [Enterococcus faecalis TX0102]
gi|310632861|gb|EFQ16144.1| YihY family protein [Enterococcus faecalis TX0635]
gi|315025881|gb|EFT37813.1| YihY family protein [Enterococcus faecalis TX2137]
gi|315028196|gb|EFT40128.1| YihY family protein [Enterococcus faecalis TX4000]
gi|315035714|gb|EFT47646.1| YihY family protein [Enterococcus faecalis TX0027]
gi|315146132|gb|EFT90148.1| YihY family protein [Enterococcus faecalis TX2141]
gi|315146331|gb|EFT90347.1| YihY family protein [Enterococcus faecalis TX4244]
gi|315154461|gb|EFT98477.1| YihY family protein [Enterococcus faecalis TX0031]
gi|315157121|gb|EFU01138.1| YihY family protein [Enterococcus faecalis TX0043]
gi|315160169|gb|EFU04186.1| YihY family protein [Enterococcus faecalis TX0312]
gi|315164314|gb|EFU08331.1| YihY family protein [Enterococcus faecalis TX1302]
gi|315166495|gb|EFU10512.1| YihY family protein [Enterococcus faecalis TX1341]
gi|315171501|gb|EFU15518.1| YihY family protein [Enterococcus faecalis TX1342]
gi|315575186|gb|EFU87377.1| YihY family protein [Enterococcus faecalis TX0309B]
gi|315578172|gb|EFU90363.1| YihY family protein [Enterococcus faecalis TX0630]
gi|315582613|gb|EFU94804.1| YihY family protein [Enterococcus faecalis TX0309A]
gi|323481264|gb|ADX80703.1| ribonuclease BN [Enterococcus faecalis 62]
gi|327535592|gb|AEA94426.1| YihY family protein [Enterococcus faecalis OG1RF]
Length = 302
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 109/210 (51%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+V+ + A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+
Sbjct: 64 SVLPYIAEAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAF 123
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + +++ + R++SF +LL V +V + + + ++ F +++
Sbjct: 124 GVEQRKNFILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQAL 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T + L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+
Sbjct: 184 KWPLTTVVLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIA 243
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y + S + +++L ILGA +NA
Sbjct: 244 SYQIIGSFIILMLWLNFAATIIILGAIVNA 273
>gi|299783492|gb|ADJ41490.1| Ribonuclease BN [Lactobacillus fermentum CECT 5716]
Length = 298
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 128/258 (49%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
EHF A+ ++ LLS+FP ++ NL LG TV+ + A P + +
Sbjct: 17 EHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLD--AKTVLPYLQSAIPSSVYQ 74
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I L + G+ T AL A + +S G+ A + S+N AY V + ++ I R++SF
Sbjct: 75 FIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAYGVAKNQNPIINRVLSF 134
Query: 137 GYVLLASV---TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++++ + LVIM + + AL + F P N + + + R T LFI L
Sbjct: 135 IWMIIVIMIIFALVIMYGLGEQVLEALQPILHF-PI--NYVTLFSSLRWPVTFGGLFIFL 191
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F+P A+ ++ ++ G + + W+ + LF++Y V F+ Y + + + ++
Sbjct: 192 TLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLNSYKTIGAFILMMM 251
Query: 254 FLYMLGVFFILGAELNAS 271
+L G+ ++GA +NA+
Sbjct: 252 WLDFSGMIVMIGAIVNAT 269
>gi|114705037|ref|ZP_01437945.1| Ribonuclease BN family protein [Fulvimarina pelagi HTCC2506]
gi|114539822|gb|EAU42942.1| Ribonuclease BN family protein [Fulvimarina pelagi HTCC2506]
Length = 321
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 10/268 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ + F E +A+ I+ LL++FP I + G + Q + + + G
Sbjct: 25 DVLMRVKDRFDEHSVTLVAAGITFYILLALFPAITALVAIYGLVADPQTIQAQLSNLEGI 84
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I ++ ++ + L F +S L + Y S+ GV+AL ++N AY+ + R
Sbjct: 85 VPAGALGIIHSQLERLTSQTESSLSIAFAVSILLSIYSSTKGVKALFKAMNIAYQEKDER 144
Query: 127 SWYITRLISFGYVLLASVTLVIMSFV-FVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ LIS +V+ AS+ LVI++ V V IP L+ + PA +L+++ + A
Sbjct: 145 GFIKQNLISMAFVV-ASIVLVILAIVTLVVIPSVLSLLP--LPAGVTILVLVVPPLVLAL 201
Query: 186 MLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +I +F F P +S + PG + T + WV+ ++ F+ Y + Y
Sbjct: 202 LAMAWIAGLF--RFGPHRRSPTFKWLTPGAVLTILGWVIASIAFSFYASNVKNFDATYGS 259
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM 272
+ASI+ L++ +++ + + GAELNA +
Sbjct: 260 MASIIVFLMWTWIMMIILLAGAELNAQL 287
>gi|315033446|gb|EFT45378.1| YihY family protein [Enterococcus faecalis TX0017]
Length = 302
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 109/210 (51%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+V+ + A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+
Sbjct: 64 SVLPYIAEAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAF 123
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + +++ + R++SF +LL V +V + + + ++ F +++
Sbjct: 124 GVEQRKNFILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQAL 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T + L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+
Sbjct: 184 KWPLTTVVLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIA 243
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y + S + +++L ILGA +NA
Sbjct: 244 SYQIIGSFIILMLWLNFAATIIILGAIVNA 273
>gi|282881919|ref|ZP_06290564.1| T-RNA-processing ribonuclease BN [Peptoniphilus lacrimalis 315-B]
gi|281298194|gb|EFA90645.1| T-RNA-processing ribonuclease BN [Peptoniphilus lacrimalis 315-B]
Length = 299
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 137/267 (51%), Gaps = 15/267 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
E D + + ++ +LS+FPF++ N+ FL V +++++ +P + + + +
Sbjct: 26 ENDITSYGAGLAFFLILSIFPFLIALINIVNFLDIIN-VDNILNLM-QYFPNSVKEIVKN 83
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+++ + L +IS LA + +S+ + L +N +Y + R++++ R+++ F
Sbjct: 84 FFIELNITSSTELLSISVLAGLFSASSAINKLIKFINNSYGFEDNRNFFLNRVLAIIFTL 143
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNGRIYATMLALFIGLIFV 196
+ + + L+I+S VF I + ++ F + L II N I ++ LF+ V
Sbjct: 144 LFIFMILLLIVSQVFGKI-IFYKFISIFHIDSKIIYFLWIIANSLI--PLIYLFLTFSAV 200
Query: 197 HLFLPA----AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ F P K K +++PG +F+ + ++ V+F Y+ F YS Y L I+ L
Sbjct: 201 YRFAPCPPKNDKIKYKTVIPGSLFSTFAVIIATVIFAFYVNNFGKYSITYGSLGGIIVFL 260
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
++L++L ++GAE+N +++Y +K
Sbjct: 261 IWLFLLSTLILIGAEIN--IVLYSLKK 285
>gi|227513933|ref|ZP_03943982.1| ribonuclease BN [Lactobacillus fermentum ATCC 14931]
gi|227087692|gb|EEI23004.1| ribonuclease BN [Lactobacillus fermentum ATCC 14931]
Length = 308
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 128/258 (49%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
EHF A+ ++ LLS+FP ++ NL LG TV+ + A P + +
Sbjct: 27 EHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLD--AKTVLPYLQSAIPSSVYQ 84
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I L + G+ T AL A + +S G+ A + S+N AY V + ++ I R++SF
Sbjct: 85 FIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAYGVAKNQNPIINRVLSF 144
Query: 137 GYVLLASV---TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++++ + LVIM + + AL + F P N + + + R T LFI L
Sbjct: 145 IWMIIVIMIIFALVIMYGLGEQVLEALQPILHF-PI--NYVTLFSSLRWPVTFGGLFIFL 201
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F+P A+ ++ ++ G + + W+ + LF++Y V F+ Y + + + ++
Sbjct: 202 TLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLNSYKTIGAFILMMM 261
Query: 254 FLYMLGVFFILGAELNAS 271
+L G+ ++GA +NA+
Sbjct: 262 WLDFSGMIVMIGAIVNAT 279
>gi|225569108|ref|ZP_03778133.1| hypothetical protein CLOHYLEM_05188 [Clostridium hylemonae DSM
15053]
gi|225161907|gb|EEG74526.1| hypothetical protein CLOHYLEM_05188 [Clostridium hylemonae DSM
15053]
Length = 283
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 57 QFVP----TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
Q+ P V+ V +P + IT + QV + G+ ++ + A + + GV A+
Sbjct: 50 QYTPVTKADVMTAVIRVFPSSVDSLITSIVNQVYN-QSSGIIPVTVIVALWSAGKGVLAM 108
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
LN Y E R++ + R+ + Y ++ + ++ + + V ++ + P L
Sbjct: 109 TGGLNCVYNCRETRNYLVLRIRATLYTVMFILVIIFLLVLSVFGNTLNIFIAEHIPILSG 168
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L + R+Y + L + + ++ FLP K + +PG +F I W++ + +F+ Y+
Sbjct: 169 LADWLIRTRVYIMPVVLVVFSLLIYKFLPNRKDSLKKQIPGAVFAAIGWMIVSWIFSVYV 228
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F +S MY L +I+ ++++Y +LG E+N M
Sbjct: 229 DIFKGFSDMYGSLTTIVLIMLWMYFCMYSILLGGEINILM 268
>gi|169825899|ref|YP_001696057.1| transport protein [Lysinibacillus sphaericus C3-41]
gi|168990387|gb|ACA37927.1| possible transport protein [Lysinibacillus sphaericus C3-41]
Length = 305
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + K I + + ++L L +I L + +S G+ AL +LN+AY E R+ +
Sbjct: 92 PDEVYKLIENTLNEILTNRNSSLLSIGVLGTIWSASKGINALIRALNKAYDT-EGRAGIL 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALG--NLLLIIW-NGRIYATM 186
R G L+ +V LV++ V + +P+ + F F +G +W N R
Sbjct: 151 DR----GLSLVFTVALVVVMAVALLLPVFGQQIGHFLFSIVGIEEQFESVWHNLRWSIPP 206
Query: 187 LALFIGLIFVHLFLP--AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +FI L+ ++ F+P + + KI+ + PG +F ++W+V F+ YI F+ YS Y
Sbjct: 207 ILIFIVLMGIYWFVPNTSPRLKILGVWPGAMFATLAWLVVTYAFSFYINNFANYSATYGS 266
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM 272
+ ++ +++LY G+ I G LNA+M
Sbjct: 267 IGGVIILMLWLYFTGIILIFGGVLNATM 294
>gi|184155905|ref|YP_001844245.1| hypothetical protein LAF_1429 [Lactobacillus fermentum IFO 3956]
gi|183227249|dbj|BAG27765.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
Length = 308
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 128/258 (49%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
EHF A+ ++ LLS+FP ++ NL LG TV+ + A P + +
Sbjct: 27 EHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLD--AKTVLPYLQSAIPSSVYQ 84
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I L + G+ T AL A + +S G+ A + S+N AY V + ++ I R++SF
Sbjct: 85 FIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAYGVAKNQNPIINRVLSF 144
Query: 137 GYVLLASV---TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++++ + LVIM + + AL + F P N + + + R T LFI L
Sbjct: 145 IWMIIVIMIIFALVIMYGLGEQVLEALQPILHF-PI--NYVTLFSSLRWPVTFGGLFIFL 201
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F+P A+ ++ ++ G + + W+ + LF++Y V F+ Y + + + ++
Sbjct: 202 TLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLNSYKTIGAFILMMM 261
Query: 254 FLYMLGVFFILGAELNAS 271
+L G+ ++GA +NA+
Sbjct: 262 WLDFSGMIVMIGAIVNAT 279
>gi|313497651|gb|ADR59017.1| Putative ribonuclease BN [Pseudomonas putida BIRD-1]
Length = 318
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL ++ + A + +S GV + ++N AY V E R + +S
Sbjct: 82 NPVIDQLQQS----KGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRPVWKRIPLS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y + + L+ + + V P + ++ + ++ +W R ++ L + +
Sbjct: 138 IFYTVGLAGMLLAAAALMVLGPQVMEWIAAQI-GMQEFIVTLWTILRWPVIIILLMVAVA 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P + + I PG + + W+V ++ F +Y+ TF+ Y+ MY + +I+ L++
Sbjct: 197 LIYYVMPDVEQQFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGAIIVLLLY 256
Query: 255 LYMLGVFFILGAELNA 270
Y+ +LGAE+NA
Sbjct: 257 FYISAAVLLLGAEMNA 272
>gi|297563154|ref|YP_003682128.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296847602|gb|ADH69622.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 330
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 130/263 (49%), Gaps = 11/263 (4%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ F E+ +A+ ++ A+LS+FP ++ +L G G T+ D + P A
Sbjct: 38 VGEFKEDALADLAAGLTYYAILSLFPALLVLVSLLGLAGPSA-TQTLTDNISATMPADAA 96
Query: 76 KPITDEILQVLA-VPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRL 133
+ +T I + A G+F + +LA A +S++G + A + N Y V E R + T
Sbjct: 97 RLVTTAIENLQGNQTAAGVFGLVSLAIALWSASGYIAAFMRASNVVYDVPEGRPIWKTLP 156
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL---ALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
I G LL +V++S V + L A A+V + LG+ ++ +WN + +L +
Sbjct: 157 IRVGVTLL---MVVLLSLTVVGVALTGSAAAWVGQLL-GLGSTVVTVWNIAKWPVLLLIV 212
Query: 191 IGLI-FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ +I ++ P A+ + PG + + W++ + F Y+ F++Y Y +A+++
Sbjct: 213 VFMIALLYWASPNARRGFRWVSPGSVLAVVLWLLASAAFAFYVANFASYGRTYGTMATVV 272
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
LV+L++ + +LG E NA +
Sbjct: 273 VFLVWLWITNIAILLGEEFNAEI 295
>gi|70726074|ref|YP_252988.1| hypothetical protein SH1073 [Staphylococcus haemolyticus JCSC1435]
gi|68446798|dbj|BAE04382.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 403
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 18/198 (9%)
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS------ 135
I V + GL +I + A + +SNG+ A+ S N AY V + R+ + +++S
Sbjct: 135 ISDVTKNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDNRNGILLKILSVIFTIV 194
Query: 136 FGYVLLASVTLVIMSFV---FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
G V L ++ L M V F+ PL L K+ LI R+ ++ + I
Sbjct: 195 LGVVFLVAMALPTMGSVIAHFLFGPLGLDSQVKWI-----FSLI----RVVLPLIIILIL 245
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ P K+K+ S+LPG IFT + W++G+ F YI F YS Y +A I+ L
Sbjct: 246 FTILYSVAPNVKTKLKSVLPGAIFTSVIWLLGSFAFGFYISNFGNYSKTYGSIAGIIILL 305
Query: 253 VFLYMLGVFFILGAELNA 270
++LY+ I+GAE+NA
Sbjct: 306 IWLYLTSFIIIIGAEINA 323
>gi|145224451|ref|YP_001135129.1| putative ribonuclease BN [Mycobacterium gilvum PYR-GCK]
gi|145216937|gb|ABP46341.1| putative ribonuclease BN [Mycobacterium gilvum PYR-GCK]
Length = 401
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 127/270 (47%), Gaps = 13/270 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-----DV 65
++ F + +A+ ++ A+LS+FP +V +L G +G + + DV
Sbjct: 78 VLRKTAREFTHDQCTDLAAALTYYAVLSLFPALVVVMSLLGVIGQSERTADAVLGIVDDV 137
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVE 124
GA +V+ +PI Q++ P+ GL + + A +S++G V A ++NR Y V E
Sbjct: 138 SPGAAVDVLREPIQ----QLVNAPSAGLTLVLGIVGALWSASGFVGAFGRAMNRIYEVEE 193
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIY 183
R + RL ++ L + + + + +A+ +A + +G L +WN R
Sbjct: 194 GRPGWKLRLQQL-FLTLVGLIVAATAALLLAVSGPVAEAVGGYLGVGATGLTVWNIARWP 252
Query: 184 ATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + G+ ++ P + K I G ++WV ++ F Y+ F Y+ +
Sbjct: 253 LLLVLVVFGVAMLYYVSPNVRQPKFRWISVGAAIAIVTWVCASLGFGFYVANFGNYNKTF 312
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
LA ++ L++L++ + + GAE++A +
Sbjct: 313 GTLAGVIVFLLWLWLTNLALLFGAEVDAEL 342
>gi|319653355|ref|ZP_08007455.1| hypothetical protein HMPREF1013_04072 [Bacillus sp. 2_A_57_CT2]
gi|317394839|gb|EFV75577.1| hypothetical protein HMPREF1013_04072 [Bacillus sp. 2_A_57_CT2]
Length = 274
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 119/243 (48%), Gaps = 17/243 (6%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
E+D + +A+ ++ LLS+FP ++F L +L Q +++VV P K I
Sbjct: 18 EDDVFGLAAQLAYFFLLSLFPLLIFLVTLVPYLPITQ--QDILNVVRDFAPGETMKLIES 75
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I ++ K L + +A + +SNG+ A+ + N+AY V E R + I R G +
Sbjct: 76 NIYEITQRNGK-LLSFGIIATLWSASNGINAVVKAFNKAYDVKETRHFIIAR----GMAI 130
Query: 141 LASVTLVIMSFVFVAIPLALAYVRK---FFPA---LGNLLLIIWNG-RIYATMLALFIGL 193
L + ++ FVFV L + R+ F + L L IWN R + LF+
Sbjct: 131 LLTFAMI---FVFVLALLLPVFGRQIGLFISSEFGLSGQFLAIWNMVRWLVSPFILFVVF 187
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ P K K +S++PG IF WV+ ++ F++Y+ +F +S Y + +I+ ++
Sbjct: 188 TGLYWIAPNKKLKCISVVPGAIFATAGWVLSSLAFSYYVSSFGNFSATYGSIGAIIVLMI 247
Query: 254 FLY 256
+ Y
Sbjct: 248 WFY 250
>gi|296282984|ref|ZP_06860982.1| hypothetical protein CbatJ_05158 [Citromicrobium bathyomarinum
JL354]
Length = 344
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 13/258 (5%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ A+L++FPF + GA + G I+ + A P V+A+ I
Sbjct: 62 NDGFLYAGNLAYLAMLAIFPFFITGAAIFAAFGESSERAASINALLLAMPPVVAEVIEPV 121
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
V+ L L + + +E +R L R+Y ++++ RL S G ++
Sbjct: 122 ARNVIDARQGWLLWAGGLLGLWTVGSLIETIRDLLRRSYGTEATQAFWRYRLASTGIIIA 181
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR------IYATMLALFIGLIF 195
A + L++ V I A + +FP L + L + R ++ + ALF
Sbjct: 182 AVIVLMLSLIAQVMIGTAQQIIAAYFPPLSDALGKLALARFVPGFGLFGSFYALF----- 236
Query: 196 VHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ P + K PG + + WV V + +F +Y+ Y LA I+ L+F
Sbjct: 237 -YVLTPGQYRKKRYPKWPGALAVTLWWVGVTVALPQVLRSFFSYNLTYGSLAGIIITLLF 295
Query: 255 LYMLGVFFILGAELNASM 272
+++G+ ++GA+LNA++
Sbjct: 296 FWLVGLGVVIGAQLNAAL 313
>gi|220923045|ref|YP_002498347.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
gi|219947652|gb|ACL58044.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
Length = 347
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 18/272 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ ++ A A ++ ALL+VFP + +L G + + + ++ G
Sbjct: 53 DIVWRVFWSLPQDRVLATAGGVAFFALLAVFPGLATIVSLYGLVADPSVIYQHLSLLTGV 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA--AYFSSN-GVEALRISLNRAYRVVEMR 126
P + + E+ ++ A L T S L+ A++S+N GV AL +LN Y+ E R
Sbjct: 113 LPSGVLDLLASELTRITKQGAGTLSTTSVLSLLIAFWSANSGVSALFDALNVIYKEREKR 172
Query: 127 SWYITRLISF-GYVLLASVTLVIMSFV----FVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ L+ F G LL +++ V+ + + VA+P+ L + A L L+ W
Sbjct: 173 T-----LVRFYGTTLLFTLSSVVFALIATGMVVAMPIILNQIGLRSSADAALRLVRWP-- 225
Query: 182 IYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A ++ + +GL ++ + P+ + +K + G + WV + LF+ Y+ +F +Y+
Sbjct: 226 --ALLVVVSLGLSAIYRYGPSRREAKWRWVTWGSSVAALLWVCASALFSWYVASFDSYNR 283
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L + + + ++++ V +LGAELNA M
Sbjct: 284 TYGSLGAGVGFMTWIWLSVVIVLLGAELNAEM 315
>gi|315444784|ref|YP_004077663.1| hypothetical protein Mspyr1_32120 [Mycobacterium sp. Spyr1]
gi|315263087|gb|ADT99828.1| predicted membrane protein [Mycobacterium sp. Spyr1]
Length = 401
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 127/270 (47%), Gaps = 13/270 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-----DV 65
++ F + +A+ ++ A+LS+FP +V +L G +G + + DV
Sbjct: 78 VLRKTAREFTHDQCTDLAAALTYYAVLSLFPALVVVMSLLGVIGQSERTADAVLGIVDDV 137
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVE 124
GA +V+ +PI Q++ P+ GL + + A +S++G V A ++NR Y V E
Sbjct: 138 SPGAAVDVLREPIQ----QLVNAPSAGLTLVLGIVGALWSASGFVGAFGRAMNRIYEVEE 193
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIY 183
R + RL ++ L + + + + +A+ +A + +G L +WN R
Sbjct: 194 GRPGWKLRLQQL-FLTLVGLIVAATAALLLAVSGPVAEAVGGYLGVGATGLTVWNITRWP 252
Query: 184 ATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + G+ ++ P + K I G ++WV ++ F Y+ F Y+ +
Sbjct: 253 LLLVLVVFGVAMLYYVSPNVRQPKFRWISVGAAIAIVTWVCASLGFGFYVANFGNYNKTF 312
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
LA ++ L++L++ + + GAE++A +
Sbjct: 313 GTLAGVIVFLLWLWLTNLALLFGAEVDAEL 342
>gi|325961896|ref|YP_004239802.1| YihY family protein [Arthrobacter phenanthrenivorans Sphe3]
gi|323467983|gb|ADX71668.1| YihY family protein [Arthrobacter phenanthrenivorans Sphe3]
Length = 404
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 11/269 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
I+ + F ++ +A+ ++ A+LS+FP I+ +L G G Q ++ +V G
Sbjct: 40 ILKKTLREFNKDQCPDLAAALTYYAVLSLFPAILALVSLIGLFGDPQKTTDALLQIVRGF 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P A + + + + PA GL I LA A +S++G V A ++NR Y V E R +
Sbjct: 100 VPAETADTVGGVVSDLASAPAAGLTLIIGLATALWSASGYVGAFGRAMNRIYEVDEGRPF 159
Query: 129 YITRLISFGYVLLASVTLVIMSFVFV-AIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
R LLA V + I++ + V + P+A A L + L IW+ + M+
Sbjct: 160 VKLRGTMLVVTLLAVVIVAILAGMLVLSGPVAEAV--GGLIGLSGVFLAIWDIAKWPVMV 217
Query: 188 ALFIGLIFV-HLFLPAAKS---KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L I +I V + P K K MS+ G+ ++V ++ F Y+ F Y+ Y
Sbjct: 218 GLIIVIIAVLYYATPNVKQPKFKWMSMGSGIAL--FVFLVASLGFGFYVGNFGNYNKTYG 275
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASM 272
L ++ L++L++L + + GAE +A M
Sbjct: 276 TLGGVIVMLLWLWILNMSLLFGAEFDAEM 304
>gi|154505816|ref|ZP_02042554.1| hypothetical protein RUMGNA_03356 [Ruminococcus gnavus ATCC 29149]
gi|153793834|gb|EDN76254.1| hypothetical protein RUMGNA_03356 [Ruminococcus gnavus ATCC 29149]
Length = 289
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 20/246 (8%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVP----TVIDVVFGAWPEVIAKPITDEILQVLAVPAK 91
+LS+ P I+ L A QF P VID V +P + I + QV +
Sbjct: 36 VLSMIPIILL------LLTAVQFTPATYANVIDAVEQVFPTSVQGFIRSIVTQVYFSQSA 89
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV---LLASVTLVI 148
+ I+ L A + + GV ++ LN Y E R++ RL + Y +LA V ++
Sbjct: 90 KIIPITILVALWSAGRGVLSVTAGLNCIYGNTETRNYVYLRLRASLYTVIFILAIVLSLV 149
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP----AAK 204
+S +I A + K P L+ I R T+ L + V+ +LP K
Sbjct: 150 LSVFGNSIS---AMIYKHAPFWSTLMQYIIKIRTVMTLAVLTVFWDLVYKYLPNRRATQK 206
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ + LPG +FT W++ + +F+ Y+ F +S MY + +I+ +++LY+ +L
Sbjct: 207 TTLRKQLPGAVFTACGWLLISFIFSIYLDIFEGFSDMYGSMTTIVLIMLWLYLCMYVILL 266
Query: 265 GAELNA 270
G E+NA
Sbjct: 267 GGEVNA 272
>gi|300813395|ref|ZP_07093746.1| YihY family protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512538|gb|EFK39687.1| YihY family protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 299
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 136/267 (50%), Gaps = 15/267 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
E D + + ++ +LS+FPF++ N+ FL + +++++ +P + + + +
Sbjct: 26 ENDITSYGAGLAFFLILSIFPFLIALINIVNFLDIIN-IDNILNLM-QYFPNSVKEIVKN 83
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+++ + L +IS LA + +S+ + L +N +Y + R+++ R+++ F
Sbjct: 84 FFIELNITSSTELLSISVLAGLFSASSAINKLIKFINNSYGFEDNRNFFFNRVLAIIFTL 143
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNGRIYATMLALFIGLIFV 196
+ + + L+I+S VF I + ++ F + L II N I ++ LF+ V
Sbjct: 144 LFIFMILLLIVSQVFGKI-IFYKFISIFHIDSKIIYFLWIIANSLI--PLIYLFLTFSAV 200
Query: 197 HLFLPA----AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ F P K K +++PG +F+ + ++ V+F Y+ F YS Y L I+ L
Sbjct: 201 YRFAPCPPKNDKIKYKTVIPGSLFSTFAVIIATVIFAFYVNNFGKYSITYGSLGGIIVFL 260
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
++L++L ++GAE+N +++Y +K
Sbjct: 261 IWLFLLSTLILIGAEIN--IVLYSIKK 285
>gi|170781551|ref|YP_001709883.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
gi|169156119|emb|CAQ01258.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
Length = 394
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 127/264 (48%), Gaps = 7/264 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAWPEV 73
A+ F++ G M + ++ + LS+ P V +L G +G + V V+ V+ +
Sbjct: 42 AVYGFMKHRGIDMTASLTFYSTLSLVPAAVAVLSLIGVVGDTRAGVEGVLAVLTSVLGDS 101
Query: 74 IAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I D + Q+ P G+ FT+S L A + S+ V A ++NR E R R
Sbjct: 102 AVDVIRDPVEQLADGPRSGVAFTVSFLGALWTSAAYVTAFGRAMNRVQETEEGRPLVKYR 161
Query: 133 LISFGYVL-LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ G + L V++V++ + + A A ++ LG+ L++W + ++AL
Sbjct: 162 ALMLGVTIALLVVSVVMVGMLLLTDEGARALGQQL--GLGDTTLVVWAVVKWPLLVALLT 219
Query: 192 GLIFV-HLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
G+I V + P + + + +L G + ++W +G F Y+ +TY + Y L +++
Sbjct: 220 GIIGVLYAATPNLRRRRVDLLTWGSLVAIVAWGLGTAGFVAYVTHVATYESTYGVLGAVI 279
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L++LY+ + +LG EL+ +I
Sbjct: 280 VLLLWLYIGNLSLVLGGELDVEII 303
>gi|284991775|ref|YP_003410329.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284065020|gb|ADB75958.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 374
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 114/240 (47%), Gaps = 10/240 (4%)
Query: 37 LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL--- 93
L++FP ++ N+ G + + + V ++ + PE A I D++ ++ L
Sbjct: 98 LAIFPALIAMMNIYGLVASPETVARQVEDLSAQLPESAADLIGDQLNAIVTNSGGALSFG 157
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
S L A + +S GV L ++N AY VE R + + IS G + L ++ V+++F
Sbjct: 158 LAASVLGALWSASGGVGNLVTAVNLAYDEVETRGFVKRKAISLG-LTLGAIVFVLITFTL 216
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG-LIFVHLFLPAAKSKIMS-IL 211
VA+ + V P LG ++ + +L +F G L ++ P + + +
Sbjct: 217 VAV---VPNVLDALP-LGPFATVLAQVVRWVVLLGIFAGSLAVLYRVAPDRDAPQLRWVS 272
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
G I + W V ++ F+ Y+ F +Y Y +A ++ +++LY+ +LGAE+N+
Sbjct: 273 LGAIVVTVIWAVVSLGFSIYVDNFGSYDKTYGAIAGVIVLMLWLYLTCYLILLGAEINSE 332
>gi|16264688|ref|NP_437480.1| hypothetical protein SM_b21363 [Sinorhizobium meliloti 1021]
gi|15140826|emb|CAC49340.1| conserved hypothetical membrane protein [Sinorhizobium meliloti
1021]
Length = 364
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 126/267 (47%), Gaps = 10/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + + E+ +A+ ++ LLSVFP + ++ G + + ++
Sbjct: 72 DVFWRVVSQISEDRISLIAAGVTFYVLLSVFPALASLVSIYGLVSDPATIAEQATLLAAV 131
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +TD++ + + L F L A + + NGV AL ++N AY E R
Sbjct: 132 LPAQSLQMMTDQLETLSSQKTSSLSFGFIAGLLFALWSARNGVGALFEAMNIAYDETEKR 191
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+S G+ L + ++ +P LA++ L L + W +
Sbjct: 192 SFIRLTLLSIGFTLAGLILTAVLIAAIAVLPAVLAFLHLELEGL--LRFVRWP----VML 245
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + G+ ++ + P+ + +K+ + G + I W+V ++ F++YI F+ Y+ Y L
Sbjct: 246 LLIAAGITLIYRYGPSREPAKLRWLTWGAALSTICWLVASLAFSYYIDNFANYNATYGAL 305
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
+++ ++++++ + I+GAELNA +
Sbjct: 306 GALIGFMLWIWISTMIVIIGAELNAEL 332
>gi|154484798|ref|ZP_02027246.1| hypothetical protein EUBVEN_02516 [Eubacterium ventriosum ATCC
27560]
gi|149734646|gb|EDM50563.1| hypothetical protein EUBVEN_02516 [Eubacterium ventriosum ATCC
27560]
Length = 282
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 124/261 (47%), Gaps = 10/261 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
YD I+ ++ + S +LS+FPFI+ NL G +Q T+I ++ P+
Sbjct: 13 YDFIDTIGQDKVGIYTAQASFFIILSIFPFILLFFNLIGHASINQ--NTIIYLIHSYAPD 70
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + ++ + +I+A+AA + +S GV ++ L ++ + R+++I+R
Sbjct: 71 SLKPLFIQVVSEIYEHVSSTAVSITAIAAIWSASKGVLSVMFGLYEIAKIHQKRNYFISR 130
Query: 133 LISFGYVLLASV----TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+S Y ++ +V T+V++ F LA++ P L + ++ R L
Sbjct: 131 FVSMLYTIIFTVALASTMVLLVFGNKLFNLAISLA----PWLRQISIVTLMLRYLLVFLL 186
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + ++ + + PG F+ + WVV + +F+ Y+ +FS S MY ++
Sbjct: 187 LVLFFSLIYRLANFKLATFGKVFPGAFFSALGWVVFSYIFSIYVDSFSGMSYMYGSFTAV 246
Query: 249 MTCLVFLYMLGVFFILGAELN 269
+ ++++Y L +GAE+N
Sbjct: 247 IVFMLWIYFLIYIMFIGAEIN 267
>gi|251799250|ref|YP_003013981.1| ribonuclease BN [Paenibacillus sp. JDR-2]
gi|247546876|gb|ACT03895.1| ribonuclease BN [Paenibacillus sp. JDR-2]
Length = 296
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 129/259 (49%), Gaps = 10/259 (3%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIA 75
F ++D A+ + ++ +LS FPF++F +L F L V +I ++ PE
Sbjct: 17 RFRDDDVPALGAQLTYYFILSFFPFLIFVVSLMSFVQLSGDSVVAELIRLL----PEQTG 72
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I + V+ L +I +A + +SNGV A+ +N+AY V E R ++ R IS
Sbjct: 73 EAIQSILQDVMNNSRVTLLSIGMIATLWSASNGVNAIIKGVNKAYDVEENRPFWKVRAIS 132
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
L+ ++ +++ + + + ++ +F + + LI W Y ++ F+ ++F
Sbjct: 133 LAATLVLALAILLAIVLLIFGEVIGEFLFDWFDSPVSFELI-WGILKYVFPIS-FMLVVF 190
Query: 196 VHLF--LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
L+ +P K + ++ PG +F W+ ++LF YI F YS Y + I+ L+
Sbjct: 191 SLLYWIVPNHKIRFKTVFPGALFATFGWIASSLLFQFYINNFGNYSKTYGSIGGIIILLI 250
Query: 254 FLYMLGVFFILGAELNASM 272
+LY+ ILG E+NA++
Sbjct: 251 WLYISSNIIILGGEVNATL 269
>gi|229592220|ref|YP_002874339.1| putative ribonuclease [Pseudomonas fluorescens SBW25]
gi|229364086|emb|CAY51687.1| putative ribonuclease [Pseudomonas fluorescens SBW25]
Length = 316
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL ++ + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRFPLS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y + + L+ + + V P + ++ + ++ +W R ++ L +
Sbjct: 138 IFYTVGIAGMLLAAAALMVLGPQVMEWLAGQI-GMQEFVVTLWTIVRWPLIVILLMFAVA 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P + K I PG + + W+V ++ F +Y+ TF+ Y+ MY + +I+ L++
Sbjct: 197 LMYYVMPDVEQKFRFITPGSVLAVVVWIVASLGFGYYVKTFADYNAMYGSIGAIIVLLLY 256
Query: 255 LYMLGVFFILGAELNA 270
Y+ +LGAE+NA
Sbjct: 257 FYISAAVLLLGAEMNA 272
>gi|253698774|ref|YP_003019963.1| ribonuclease BN [Geobacter sp. M21]
gi|251773624|gb|ACT16205.1| ribonuclease BN [Geobacter sp. M21]
Length = 316
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 2/257 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A + F EED A+ ++ L + FPF++F L +L + V++ P
Sbjct: 22 AYKKFSEEDCPEHAAAMAYYFLFASFPFLLFLTTLIAYLPVPHLLDYVLENASRLLPGET 81
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
I D I + +GL ++ + A + SSN + ++ ++N Y V E R ++ RLI
Sbjct: 82 FTLIKDNIQALFTNKKEGLLSMGIVLALWASSNAIVSVMDAMNNLYDVKEGRPFWKVRLI 141
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA-TMLALFIGL 193
+ G V+ SV ++ + YV G ++W + T+ L + +
Sbjct: 142 AIGLVVGLSVLFLLAMAALMFGNQIGDYVAGLI-HFGEAFKVVWFAALVPITLFVLILAV 200
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F P + + + I PG + SW+ ++ F+ YI F +Y Y + +++ L+
Sbjct: 201 AVIYYFTPDVEHQWVWISPGAVIAIPSWIFMSLGFSAYINNFGSYDKTYGSIGAVIVLLL 260
Query: 254 FLYMLGVFFILGAELNA 270
+LY+ G+ + GA +N+
Sbjct: 261 WLYLTGLIILAGAVINS 277
>gi|295426440|ref|ZP_06819090.1| possible ribonuclease BN [Lactobacillus amylolyticus DSM 11664]
gi|295063808|gb|EFG54766.1| possible ribonuclease BN [Lactobacillus amylolyticus DSM 11664]
Length = 305
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 36 LLSVFPFIVFGAN-LAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
L S+FP I+ N L F + + +D++F P+ ++K I I +L + G
Sbjct: 40 LFSIFPIIIIVGNVLPLFHINTEPIADYLDLIF---PDQVSKYIMPIINTLLKNNSTGYI 96
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSFV 152
+ + A + SN V A+R+ +NR Y V VE++ ++ L + + +L + ++I V
Sbjct: 97 SFGIILAIWSFSNMVNAIRVGMNRLYGVHAVELKLSFLNFLWTRSFTILLTALMII---V 153
Query: 153 FVAIPLALAYVRKFFPALGNLLLI-------IWNGRIYATMLALFIGLIFVHLFLPAAKS 205
F AI L + + ++ L ++ I I++ R +L + + + +++ LP K
Sbjct: 154 FTAIALVMIFGQQVLEFLRPIMSISVGEIKKIFSYRYPVIILMMVVAVAYLNYVLPNIKL 213
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ I PGVIFT +SW + LF Y+ F Y + + + +++L ++ + F+ G
Sbjct: 214 RKRIIWPGVIFTVLSWSALSYLFGFYLHHFPISWENYGIIGTFIIFMLWLNIISLLFLFG 273
Query: 266 AELNASM 272
+NA++
Sbjct: 274 TSINATI 280
>gi|323489179|ref|ZP_08094411.1| putative ribonuclease BN [Planococcus donghaensis MPA1U2]
gi|323397066|gb|EGA89880.1| putative ribonuclease BN [Planococcus donghaensis MPA1U2]
Length = 298
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 95/202 (47%), Gaps = 4/202 (1%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P +A D I+ V+ P+ GL T L + +SN + A + N+AY + E RS++
Sbjct: 65 PGEVANTFQDTIVSVVTTPSGGLLTFGILGTLWSASNALTAFINATNQAYGIKETRSFFK 124
Query: 131 TRLISFGYV--LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ I+ G +L +V + ++ +F + + P ++ + I +++
Sbjct: 125 LKAIAIGLTIGMLVAVIIALVLPIFGGTIIEIIKSTLNLPEQTEIIFQVLRWVISVAVMS 184
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + L++ P +L G + + W V + F+ Y+ F +YS Y L +
Sbjct: 185 LVLALMYK--LAPNKSFPFKEVLIGAVIATVLWQVVSFGFSIYVSNFGSYSATYGSLGGL 242
Query: 249 MTCLVFLYMLGVFFILGAELNA 270
+ +++ ++ G+ ++GAE+NA
Sbjct: 243 IVLMLWFFLTGLILVIGAEINA 264
>gi|307243532|ref|ZP_07525680.1| YihY family protein [Peptostreptococcus stomatis DSM 17678]
gi|306493088|gb|EFM65093.1| YihY family protein [Peptostreptococcus stomatis DSM 17678]
Length = 283
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 34/279 (12%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQFVPTVIDVVFGAWP 71
+ F D ++ ++ ++ LS+FP ++F A + +G FV T I
Sbjct: 15 VNQFNIADMYSRSAGVAYYLTLSIFPSLMFLMCAFAYMPPIIG--NFVETAIRTNVPTGA 72
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I I D + ++ L I+ L A + S V++L N AY E RS+
Sbjct: 73 SNILLTIVDSAINNRSI---RLLVITFLIAVWTFSKAVKSLIAGQNSAYNFEETRSFIRL 129
Query: 132 RLISFGYVLLASVTL---VIMSFVFVAIPLALAYVRKFFPALGN------LLLIIWNGRI 182
L YV L +V VI + VF L Y KF + + LL +I+N I
Sbjct: 130 NL----YVYLYAVAFFLAVIFAVVF------LVYGGKFADIIRDRLDEFYLLTLIYNF-I 178
Query: 183 YATMLALFIGLIFVHLFL--PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ FI L+F++ F+ P KI LPG FT + WV+ ++ ++ YI FS Y
Sbjct: 179 RFVIPIFFILLMFLNFFIFGPCKPIKIRQALPGACFTTVLWVILSIAYSFYIDKFSDYKE 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y +++I+ + ++Y+ + +G ++NA + YWR
Sbjct: 239 IYGNISTIIVLMTWIYLCSISITIGYKVNA---LNYWRD 274
>gi|315149181|gb|EFT93197.1| YihY family protein [Enterococcus faecalis TX0012]
Length = 302
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 108/210 (51%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+V+ + A P+ + + I +L + GL ++SALAA + +S + AL+ ++N+A+
Sbjct: 64 SVLPYIAEAIPKDVYMNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAF 123
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + +++ + R++SF +LL V +V + + + ++ F +++
Sbjct: 124 GVEQRKNFILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQAL 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T + L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+
Sbjct: 184 KWPLTTVVLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIA 243
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y + S + +++L ILGA +NA
Sbjct: 244 SYQIIGSFIILMLWLNFAATIIILGAIVNA 273
>gi|255527896|ref|ZP_05394741.1| ribonuclease BN [Clostridium carboxidivorans P7]
gi|296184663|ref|ZP_06853074.1| YihY family protein [Clostridium carboxidivorans P7]
gi|255508423|gb|EET84818.1| ribonuclease BN [Clostridium carboxidivorans P7]
gi|296050445|gb|EFG89868.1| YihY family protein [Clostridium carboxidivorans P7]
Length = 282
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 126/269 (46%), Gaps = 30/269 (11%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIA 75
F E+D +++S ++ S + + FPF++F + G+ + + + + ++ P
Sbjct: 15 RFNEDDVLSLSSQLAYSLIFAFFPFLIFLMTVLGYSSINSQDVLAGLNRII----PRSAL 70
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I + I++V+ L + S + + +S+G + LN+AY +E RS+ + I+
Sbjct: 71 ELIKNTIIEVVDYKNPHLMSFSLIFTIWSASSGFNGVIKGLNKAYDELEHRSFLKVQFIA 130
Query: 136 FGYVLLASVTLVIMSFVFV-----------AIPLALAYVRKFFPALGNLLLIIWN-GRIY 183
+L ++ LVI F + ++ L L + +F I+W+ R
Sbjct: 131 ----VLCTIGLVIAIFTMIFLLVFGQIIGNSLALNLGFSEEF--------KIMWHIVRYI 178
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ L ++ + P + + G IF I ++ ++ F Y+ F YS +Y
Sbjct: 179 IIIVLTIFILAALYHYTPCRRLTWREVSSGAIFATIGLILVSIGFAFYVNNFGNYSKIYG 238
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASM 272
+ +++ L +L+++ + ++G ELNA++
Sbjct: 239 SIGAVIILLTWLFLVSITVVMGGELNATL 267
>gi|295110194|emb|CBL24147.1| Predicted membrane protein [Ruminococcus obeum A2-162]
Length = 300
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP----TVIDVVFGAWP 71
I+ E+ A A+ + ++S PF++ L Q+ P + V+ G P
Sbjct: 17 IKRMQEDHIGAYAAQAAYFLIMSFIPFVLVLTALV------QYTPLTYRMLRQVIIGFVP 70
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + I +V + A + IS L A + S G+++L LN Y V E R+W
Sbjct: 71 DNLQDFVLKIIAEVFSKSA-AVVPISGLFALWSSGKGMQSLIAGLNVIYHVKETRNWLTN 129
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RL S Y+ L + ++ + V A + P LG ++ I + + + + LF+
Sbjct: 130 RLYSMLYMFLFIIAIITSLLLLVMGNRIHAELIVHMPLLGKVVGRILSAKTFLVFVVLFL 189
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++ +LP K+ + S +PG ++W + + F+ Y F +S MY L++++
Sbjct: 190 VFLVLYRYLPNRKASLKSQVPGAFIIAVAWSLFSYFFSFYFTFFPNFSNMYGSLSALIMV 249
Query: 252 LVFLYMLGVFFILGAELNA 270
+++LY+ + GAELNA
Sbjct: 250 MLWLYVCMNLLLYGAELNA 268
>gi|256424888|ref|YP_003125541.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
gi|256039796|gb|ACU63340.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
Length = 323
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 22/277 (7%)
Query: 12 IYDAIEHFVEE----DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+YD I+ F++E A+ IS + LL++ PF +F L ++ T+ ++
Sbjct: 35 LYDVIKFFLKEMRNQSLGERAAAISFNFLLAIPPFFIFLFTLVPYIPMQNVEATLYELAE 94
Query: 68 GAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I D I L GL +++ + + SSN V + S N+ R
Sbjct: 95 DVTPNYNTYIIIRDMIHDFLYTHHNGLLSLAFIMGFFTSSNAVMGIARSFNKKLPGFRRR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W+ RL++ L+ + L++ + +A L Y+ F LG I + RI +
Sbjct: 155 KWWQKRLMALKLTLILIILLLLTIILIIAQGTVLGYI---FNYLG-----ITDKRILSLA 206
Query: 187 LA---LFIGLIF------VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ IGL+F ++ F+PA K I G F I ++ +LF++++ F
Sbjct: 207 DVARWILIGLLFFSMLSVIYRFVPATVKKWKFITAGSTFAAILMILVTILFSYFVNNFGN 266
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y+ +Y + +I+ ++ +Y ++G ELNAS+ I
Sbjct: 267 YNKIYGSVGTILILMLSVYFYSFILLIGFELNASIRI 303
>gi|192289850|ref|YP_001990455.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
gi|192283599|gb|ACE99979.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
Length = 317
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 78 ITDEILQVLAV-PAK-GLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLI 134
I +++ +VLA AK GL + +L+ A +S+NG V+A+ +LN Y V E R ++ +L
Sbjct: 109 IEEQVGRVLANGEAKLGLAFLISLSLALWSANGGVKAIIDALNAVYDVEEQRGFF--KLN 166
Query: 135 SFGYVLLASVTLVIMSFV--FVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFI 191
F +L +++ + +A P+ LA + LGNL+ + + GR L F
Sbjct: 167 GFSLLLTLGALGAVLAAIGLVIAAPIVLARI-----GLGNLVAVAIDYGRWPVLALMTFG 221
Query: 192 GLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
GL ++ P S + PG I +SW+ G+ ++Y+ F+ Y+ Y L + +
Sbjct: 222 GLSLLYRIAPNRPSPPWRWVAPGSIVAALSWLAGSAALSYYLANFADYNATYGSLGAAIG 281
Query: 251 CLVFLYMLGVFFILGAELNASM 272
+++++M + + G ELNA +
Sbjct: 282 LMIWMWMTAIVVLAGGELNAEI 303
>gi|307286598|ref|ZP_07566690.1| YihY family protein [Enterococcus faecalis TX0109]
gi|306502309|gb|EFM71590.1| YihY family protein [Enterococcus faecalis TX0109]
Length = 302
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 108/210 (51%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+V+ + A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+
Sbjct: 64 SVLPYIAEAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAF 123
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + +++ + R++SF +LL V +V + + + ++ F +++
Sbjct: 124 GVEQRKNFILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQAL 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T + L + + ++ +P K + SIL G IF+ + W++ + +F Y+ FS+
Sbjct: 184 KWPLTTVVLLVIMCLIYAVVPNRKLSLRSILSGAIFSTVGWMLLSQIFGLYVKYFSSRIA 243
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y + S + +++L ILGA +NA
Sbjct: 244 SYQIIGSFIILMLWLNFAATIIILGAIVNA 273
>gi|307318689|ref|ZP_07598122.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|306895716|gb|EFN26469.1| ribonuclease BN [Sinorhizobium meliloti AK83]
Length = 328
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 125/267 (46%), Gaps = 10/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + + E+ +A+ ++ LLSVFP + ++ G + + ++
Sbjct: 36 DVFWRVVSQISEDRISLIAAGVTFYVLLSVFPALASLVSIYGLVSDPATIAEQATLLAAV 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +TD++ + + L F L A + + NGV AL ++N AY E R
Sbjct: 96 LPAQSLQMMTDQLETLSSQKTSSLSFGFIAGLLFALWSARNGVGALFEAMNIAYDETEKR 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+S G+ L + ++ +P LA++ L L + W +
Sbjct: 156 SFIRLTLLSIGFTLAGLILTAVLIAAIAVLPAVLAFLHLELEGL--LRFVRWP----VML 209
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + G+ ++ + P+ + +K+ + G + I W+ ++ F++YI F+ Y+ Y L
Sbjct: 210 LLIAAGITLIYRYGPSREPAKLRWLTWGAALSTICWLGASLAFSYYIDNFANYNATYGAL 269
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
+++ ++++++ + I+GAELNA +
Sbjct: 270 GALIGFMLWIWISTMIVIIGAELNAEL 296
>gi|254560152|ref|YP_003067247.1| hypothetical protein METDI1672 [Methylobacterium extorquens DM4]
gi|254267430|emb|CAX23269.1| conserved hypothetical protein; putative Ribonuclease BN domain
[Methylobacterium extorquens DM4]
Length = 347
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 137/270 (50%), Gaps = 14/270 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + + A A ++ ALL+VFP +V +L G + + + ++ G
Sbjct: 53 DILWRVVLSLQRDRVLATAGGVAFFALLAVFPALVTIVSLYGLFSDPKAIGQHLSLLAGV 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA--AYFSSN-GVEALRISLNRAYRVVEMR 126
P + ++++++++ L T S L+ A++S+N GV AL +LN YR E R
Sbjct: 113 LPNGVLDLLSEQLVRIARQSTGALSTASLLSMIIAFWSANSGVSALFDALNVIYREREKR 172
Query: 127 S---WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
S +Y+T +F + L V ++ + + V +P+ L + A L ++ W
Sbjct: 173 SLVGFYVT---TFLFTLTGIVFVLASTGMVVILPIVLNRIGLGGLADTALRILRWP---- 225
Query: 184 ATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A +L + + L + + P+ + +K + G + +SWV +VLF+ Y+ +F +Y+ +Y
Sbjct: 226 ALLLLVSMSLSLTYRYGPSRREAKWRWVSWGSVAASLSWVCTSVLFSWYVASFDSYNRVY 285
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
L + + + ++++ V +LGAELNA M
Sbjct: 286 GSLGAGVGFMTWIWLSVVIVLLGAELNAEM 315
>gi|172056386|ref|YP_001812846.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
gi|171988907|gb|ACB59829.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
Length = 285
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 20/266 (7%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
F E + ++ ++ +LS+FPF++F L FL V+D++ P
Sbjct: 10 RFFGEAFFDKSAQLAYYLMLSLFPFLLFVVGLVSFLPFTS--GDVLDLIRPFAPAETYDL 67
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
I ++ + L +IS LAA + +S V++L SLN A V ++ L FG
Sbjct: 68 IRKNVVGIFDNGGLKLASISFLAAFWLASMSVQSLVRSLNDALEVTRKVPFWRGLLQDFG 127
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI-GL--- 193
+ +V ++I+ + + +P+A R+F + ++ N Y+ + LF GL
Sbjct: 128 F----TVGMMIILPMSLLVPVAEKLTRRFITHFAIVNDVVTN---YSWIWFLFRWGLGSL 180
Query: 194 ------IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
I ++ LP+ + + +LPG +F I+W + F++Y F +Y +Y LA
Sbjct: 181 FLLVFFILLYRVLPSVRLTVRQVLPGALFATIAWQAVSEFFSYY-AEFGSYDRLYGQLAG 239
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
I+ + + Y+ V +LG +NA +
Sbjct: 240 IIVLMTWFYLSSVVLMLGGLMNAERM 265
>gi|197303125|ref|ZP_03168170.1| hypothetical protein RUMLAC_01849 [Ruminococcus lactaris ATCC
29176]
gi|197297780|gb|EDY32335.1| hypothetical protein RUMLAC_01849 [Ruminococcus lactaris ATCC
29176]
Length = 293
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 57 QFVP----TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
Q+ P V+++V +P+ +A I I+QV + G + L A + + GV ++
Sbjct: 50 QYTPVTMNDVMELVLPVFPDTVAPLIRSVIVQVYT-KSNGFIPFTLLVALWSAGKGVLSV 108
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL-AYVRKFFPALG 171
LN Y +E R+++ R + Y +L + +++S V +L A V + P +
Sbjct: 109 TYGLNCIYDNIETRNYFYLRFRACFYTVLFLIA-IMLSLVLSVFGNSLSAVVYEHIPFMS 167
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPA----AKSKIMSILPGVIFTWISWVVGAVL 227
++ I R T++ L V+ FLP K+ + LPG FT W++ +
Sbjct: 168 KVMNFIIRIRTCLTLVVLTFFWDLVYKFLPNRSNRGKTTLRKQLPGAFFTASGWLLLSFF 227
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F+ Y+ F+ +++MY +I+ +++LY +LG E+NA
Sbjct: 228 FSVYLDIFTGFTSMYGSFTTIILIMLWLYGCMYIILLGGEINA 270
>gi|148557661|ref|YP_001265243.1| ribonuclease BN [Sphingomonas wittichii RW1]
gi|148502851|gb|ABQ71105.1| ribonuclease BN [Sphingomonas wittichii RW1]
Length = 307
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 20/264 (7%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG-------AWPE 72
V DG+ A +I+ ALL++FPF + A LA G P V V+G + +
Sbjct: 38 VYADGFIHAGNIAYLALLTMFPFFIVMAALAQLFGR---TPDVQHAVYGFLATVPPSVRQ 94
Query: 73 VIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
++A+PI+D VLA KG L + AL + + +E +R L RAY +S++
Sbjct: 95 LVAQPISD----VLAANNKGALLWLGALVGLWTVGSFIETIRDILYRAYGTRPSKSFWHY 150
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYV-RKFFPALGNLLLIIWNGRIYATMLALF 190
R + +++ SV L + +F + + V + P L +I R+ A +L L
Sbjct: 151 RAGAI-LIIVVSVILAMAAFSAQVVLTGVEQVIWRLLPFADELQPLINLSRL-APLLMLA 208
Query: 191 IGLIFVHLFLPAAKSKIMSIL--PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + L A+ ++ PG +FT W+ +L + F Y Y LA +
Sbjct: 209 GALYAMFVTLTPARYRLSDCPKWPGALFTAGWWMAVTMLLPIVVGAFGGYGRTYGSLAGV 268
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ L+F +++G+ + GA LNA++
Sbjct: 269 IVTLLFFWLVGLGLVFGAHLNAAL 292
>gi|323340240|ref|ZP_08080504.1| ribonuclease BN [Lactobacillus ruminis ATCC 25644]
gi|323092431|gb|EFZ35039.1| ribonuclease BN [Lactobacillus ruminis ATCC 25644]
Length = 309
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 3/260 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
A F + + A IS ALL++ P ++F NL L H TV+ + A P
Sbjct: 21 SAASRFNQANVSNEAIVISYYALLAIIPLMIFIGNLLPLL--HLKASTVLAYIEMAIPRS 78
Query: 74 IAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + + I+Q L + G +IS L + + +S G A++ SLN AY V + R
Sbjct: 79 IYQTLKPFIIQYLENGSSGGAASISGLISIWAASRGFNAMKRSLNVAYGVENSQGMLARR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L +F + V V++ ++ L Y+ F +++ + M+ +F
Sbjct: 139 LFAFLFTAFLGVAFVLLFIIYSFGQAVLEYLAPLFNLPMDMIDTFNQVKWPTIMVGIFWI 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ ++ F+P AK + I PG +F W+V F+ Y+ F+ Y + +++ L
Sbjct: 199 MVLLYAFIPNAKLHLRFIWPGALFATCGWMVLTQGFSVYVKYFARTVLSYGTIGTVIVVL 258
Query: 253 VFLYMLGVFFILGAELNASM 272
+L ++G +NA++
Sbjct: 259 FWLNFTCWVIMVGGIINATL 278
>gi|332686297|ref|YP_004456071.1| ribonuclease BN [Melissococcus plutonius ATCC 35311]
gi|332370306|dbj|BAK21262.1| ribonuclease BN [Melissococcus plutonius ATCC 35311]
Length = 304
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE I + L +L + GL ++SAL A + +S + AL+I++N+AY V +++ I
Sbjct: 74 PESIYHDLEPAFLSLLTRRSGGLLSVSALTALWSASQSINALQIAMNKAYGVKSRKNFII 133
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R++S +LL + LV + + L +++ + ++ + T+ L
Sbjct: 134 VRIVSLTVILLLLLALVGVVIILGLGKNILDFLQPILKVPTSFIVTFQTLKWPVTLFVLL 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I + + L +P AK I S++PG +F+ I W++ + +F YI F++ Y + S +
Sbjct: 194 IIMCLIFLVVPNAKLTIRSVIPGAVFSTIGWMLLSQVFGIYIKYFNSKVAGYQIIGSFIV 253
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L I G +NA + Y K+
Sbjct: 254 LILWLNFAATIIIFGGIINAVVEEYSSEKR 283
>gi|116668913|ref|YP_829846.1| putative ribonuclease BN [Arthrobacter sp. FB24]
gi|116609022|gb|ABK01746.1| putative ribonuclease BN [Arthrobacter sp. FB24]
Length = 377
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 128/263 (48%), Gaps = 11/263 (4%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWPEVIA 75
F ++ +A+ ++ ++LS+FP ++ +L G G A + ++D+V G P
Sbjct: 59 REFTKDQCPDLAAALTYYSVLSIFPALLALVSLLGIFGDAQKTTSGLLDIVQGIAPGDTV 118
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLI 134
I + + + PA G + L A +S++G V A ++NR Y V E R + R
Sbjct: 119 NTIRPVVEDLSSSPAAGFTLVIGLLTALWSASGYVGAFGRAMNRVYEVDEGRPFLKLRGT 178
Query: 135 SFGYVLLASVTLVIMSFVFV-AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
G ++ + +V+++ + V + P+A + LG+ L +WN + ML L I
Sbjct: 179 MLGVTVVNLLIVVVLAAMLVLSGPVAESVGNVI--GLGDAFLAVWNIAKWPVMLVLVIAA 236
Query: 194 IFVHLF-LPAAKS---KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I V + P K + MS+ G + +++ ++ F Y+ F++Y+ Y + ++
Sbjct: 237 IAVLFYATPNVKQPKFRWMSM--GSAIALVVFLLASLAFGFYVANFNSYNKTYGAIGGVI 294
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++L++L + + GAE +A M
Sbjct: 295 IALLWLWILNMSLLFGAEFDAEM 317
>gi|312962672|ref|ZP_07777161.1| ribonuclease BN [Pseudomonas fluorescens WH6]
gi|311283047|gb|EFQ61639.1| ribonuclease BN [Pseudomonas fluorescens WH6]
Length = 314
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P+ D++ Q GL ++ + A + +S GV + ++N AY VVE R + +S
Sbjct: 82 NPVIDQLQQ----SKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIWKRFPLS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLI 194
Y + + L+ + + V P + ++ + ++ +W R ++ L +
Sbjct: 138 IFYTVGIAGMLLAAAALMVLGPQVMEWLAGQI-GMQEFVVTLWTIVRWPLIVILLMFAVA 196
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P + + I PG + + W+V ++ F +Y+ TF+ Y+ MY + +I+ L++
Sbjct: 197 LMYYVMPDVEQEFRFITPGSVLAVVVWIVASLGFGYYVKTFADYNAMYGSIGAIIVLLLY 256
Query: 255 LYMLGVFFILGAELNA 270
Y+ +LGAE+NA
Sbjct: 257 FYISAAVLLLGAEMNA 272
>gi|206890928|ref|YP_002249079.1| YihY family protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742866|gb|ACI21923.1| YihY family protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 265
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 125/258 (48%), Gaps = 15/258 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-LAGFLGAHQFVPTVIDVVFGAWPEV 73
+++ F ++G ++S ++ ++LS+ P +F N L L + V V + +P
Sbjct: 12 SLKDFYNDEGVFLSSSLAFFSILSIIPLSMFIVNILMNILQEERVVKFVYSKLITFFP-A 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + E+ ++LA +K + +IS + FS A+ SLN+ ++ + R + ++ L
Sbjct: 71 IELHMIKELRKILA--SKEISSISLILYGVFSLQLFTAIEFSLNKIFKTAKKRHFIMSLL 128
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAY-VRKFFPALGNLLLIIWNG--RIYATMLALF 190
+SF +LL + T VA A Y +R F P + + L I+ + + +F
Sbjct: 129 MSFFIILLITFT--------VAASFAFTYLIRIFQPMIFSELSILLGFFLKYLLPFVLMF 180
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ LP K K+ SIL G + T + + +F Y+V +T+Y L++ +
Sbjct: 181 VITTLLYKILPNKKIKLSSILIGALITTVLIEIAKYVFAFYVVKIIKINTLYGSLSTFLA 240
Query: 251 CLVFLYMLGVFFILGAEL 268
L++L+ FI GAEL
Sbjct: 241 LLMWLFYGWAVFIYGAEL 258
>gi|291548889|emb|CBL25151.1| Predicted membrane protein [Ruminococcus torques L2-14]
Length = 280
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 57 QFVP----TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
QF P V++ V +P ++ P+ + I+ + + + + ++ L A + + GV ++
Sbjct: 50 QFTPVTKADVMEAVLPVFPSTVS-PMIESIVNQVYMTSSSIIPVTILVALWSAGKGVLSV 108
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY-VRKFFPALG 171
LN Y E R+++ R + Y L V +++S V +++ V + P L
Sbjct: 109 TYGLNCIYENTETRNYFYLRARACLYTFLFLVA-IMLSLVLSVFGNSISVIVYEHAPFLS 167
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLP----AAKSKIMSILPGVIFTWISWVVGAVL 227
++ + RIY T+ L V+ FLP A K+ + LPG FT W+ + +
Sbjct: 168 KVIHKVVQLRIYFTLPLLTFFWDLVYKFLPNRGAAGKTTLRKQLPGAFFTACGWMALSFI 227
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F+ Y+ F ++ MY +I+ +++LY +LG E+NA
Sbjct: 228 FSIYLDIFKGFTNMYGSFTTIILVMLWLYGCMYIILLGGEINA 270
>gi|255283321|ref|ZP_05347876.1| YihY family protein [Bryantella formatexigens DSM 14469]
gi|255266175|gb|EET59380.1| YihY family protein [Bryantella formatexigens DSM 14469]
Length = 310
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 113/248 (45%), Gaps = 9/248 (3%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD---EI 82
A A+ +L ++ FPF + L Q+ P D+V E++ D I
Sbjct: 55 AFAAQSALFIIMGFFPFFML------LLTLIQYTPLTSDMVMDLLMEILPSSFYDLIAGI 108
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
++ L + L + + +AA + ++ V A+ LN V E R++ RL S Y+L
Sbjct: 109 VEELFSSSTALLSGTVIAALWAAARSVLAITNGLNSVRGVEENRNYVFMRLRSGLYILFL 168
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+V+ + + L ++FP LG+ +I R +ML L + + ++ LP
Sbjct: 169 IFAIVLACILLLFGNLLQNTAFQYFPVLGSFTGMIVLVRAVISMLVLSLVFLAMYCSLPN 228
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
K KI+ +PG +F +W + + F+ Y S +++Y L +++ +++LY
Sbjct: 229 CKIKIIRQIPGAVFAASAWAIYSYGFSLYFDYASHSTSIYGSLTTVVMIMLWLYFCMWLL 288
Query: 263 ILGAELNA 270
GAE+N
Sbjct: 289 FAGAEVNC 296
>gi|331091481|ref|ZP_08340319.1| hypothetical protein HMPREF9477_00962 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404037|gb|EGG83587.1| hypothetical protein HMPREF9477_00962 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 271
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 34/227 (14%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLN 117
T +DV+ A +V+ IT IL ++ + + I+ L A + + GV A+ LN
Sbjct: 52 TKVDVM-SAVAQVVPDSITPTILAIVNQVYNQSAAVIPITILVALWSAGRGVLAVTSGLN 110
Query: 118 RAYRVVEMRSWYITRLISFGYVLL---------------ASVTLVIMSFVFVAIPLALAY 162
Y E R+++ R+ + Y +L S++L FV IPLA ++
Sbjct: 111 WIYDSRETRNYFYLRIRATFYTVLFIVVIVLTLVVLGFGNSISL----FVEAHIPLA-SH 165
Query: 163 VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
+ KF + R A AL + + ++ FLP + K +S LPG +FT + W+
Sbjct: 166 ITKFMIEI----------RTIAAFFALLVFSLCIYKFLPNRRDKFLSQLPGSLFTSVGWL 215
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ + + Y+ F + MY L +I+ +++LY +LG ++N
Sbjct: 216 LTSFFVSKYMEIFKGFEDMYGSLTTIVLIMLWLYFSMYIMLLGGKVN 262
>gi|291302773|ref|YP_003514051.1| ribonuclease BN [Stackebrandtia nassauensis DSM 44728]
gi|290571993|gb|ADD44958.1| ribonuclease BN [Stackebrandtia nassauensis DSM 44728]
Length = 301
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 9/262 (3%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I+ F ++ A+ ++ +LS+FP ++ A+L G G Q T + V P +
Sbjct: 15 IKEFNADNLTDAAAALTYYGVLSIFPGLLVLASLMGLFG--QSATTSMKDVTAVAPGPVR 72
Query: 76 KPITDEILQVLAVPAK-GLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRL 133
+TD V A PA G+ I L AA ++++G + A + N Y V E R + T
Sbjct: 73 DILTDATTGVAAQPATAGVMAIVGLLAALWAASGYIGAFMRASNVVYDVPEGRPIWKTLP 132
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + V LV + + V V + +G + +W+ + +L + + L
Sbjct: 133 LRLAVTICVGVLLVASALIVVLTGQLAGTVGELL-GVGATAVTVWDIAKW-PVLVVLVAL 190
Query: 194 IFVHLFLPAAKSKIMSIL---PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
IF L+ + +K+ L PG + W+V + F Y+ F++Y+ Y L I+
Sbjct: 191 IFSILYWASPNAKVGGPLRQAPGGLVAVGLWLVASAGFAFYVANFASYNKTYGTLGGIIV 250
Query: 251 CLVFLYMLGVFFILGAELNASM 272
++L++ + + GAELNA +
Sbjct: 251 FFIWLWVSNLAILFGAELNAEL 272
>gi|15672595|ref|NP_266769.1| hypothetical protein L1778 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723510|gb|AAK04711.1|AE006294_6 hypothetical protein L1778 [Lactococcus lactis subsp. lactis
Il1403]
Length = 297
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 28/261 (10%)
Query: 28 ASHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+S +SLS+ LL++FP + N+ FL H ++ + P + K I
Sbjct: 21 SSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFL--HINTTALLSFLSEQLPSDVYKGIEP 78
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI----SF 136
I +L GL ++S LA + S + AL++S+N+AY V R + ++R+I F
Sbjct: 79 VINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAYEVFNHRDFIVSRIIGLAAGF 138
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+L ++V+ +F L L V + FP +L + N + A +A F+ L+ +
Sbjct: 139 AILLFLYFSIVLSTFG----QLILEQVHRLFPFDDHLYRTLHNMTLPAIAVATFLSLMML 194
Query: 197 HLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS-TMYAGLASIMTCLVF 254
+ LP K K+ +PG IF+ ++V+ V T++I + +++ L I + +VF
Sbjct: 195 YFILPNVKIRKLRYTMPGTIFS--TFVL--VFLTNWIAKYVSFALQRLDDLKLIGSLVVF 250
Query: 255 LYMLGVFF-----ILGAELNA 270
M+ F I+GA LNA
Sbjct: 251 ALMIWFIFIARVLIIGAILNA 271
>gi|115372473|ref|ZP_01459781.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|310819113|ref|YP_003951471.1| ribonuclease bn-related protein [Stigmatella aurantiaca DW4/3-1]
gi|115370435|gb|EAU69362.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|309392185|gb|ADO69644.1| Ribonuclease BN-related protein [Stigmatella aurantiaca DW4/3-1]
Length = 307
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 12/264 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ + + A+ ++ +LS+FPF++F LAG + + V +I +
Sbjct: 35 DILGNLRREWKRNKLSDAAAALTFYGVLSLFPFLLFIVALAGLVIQPEQVQALIGELGRE 94
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-SW 128
P ++ + ++ Q+ + P+ GL T SALAA + ++ GV +L +LN AY V E R W
Sbjct: 95 VPPAFSQIPSAQLAQLTSGPSTGLLTFSALAAVWSAAAGVVSLMTALNTAYGVTESRPRW 154
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + + A + L+ A LA + + +G L L + A
Sbjct: 155 KVYGIALGMMLGGALLALLAGLVAVAAPALATRLGQPWMALVGWLRL---------PLAA 205
Query: 189 LFIGLIFVHLF--LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + ++ L+ LP + K I PG + + W+ ++ F+ Y+ FST+ Y L
Sbjct: 206 LLMMSLWATLYSVLPDVRQKFKFITPGSVAGVLVWLAASLGFSFYVSHFSTFGITYGALG 265
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
I+ L+++++ + +LGAE+NA
Sbjct: 266 GIIVLLLWMWISSLALMLGAEINA 289
>gi|295133960|ref|YP_003584636.1| ribonuclease BN [Zunongwangia profunda SM-A87]
gi|294981975|gb|ADF52440.1| ribonuclease BN [Zunongwangia profunda SM-A87]
Length = 310
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 27/261 (10%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV-------IDVVFGAWPEVIAKPITD 80
AS I+ S +++FPF++F NL ++ + ID + P + ++D
Sbjct: 55 ASAIAFSFFMALFPFLLFIFNLIPYVEETNLIDDFRIKFLLFIDTLL---PPETQEYVSD 111
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ P GL + S L + + +NGV A+ +Y RS + +I+ G L
Sbjct: 112 IFADIANNPRGGLLSFSFLLSIFLMTNGVNAIFTGFEFSYHTNIKRSLFRQYIIAIGVSL 171
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG------RIYATMLALFIGLI 194
+++F+ + + + Y+ L LI +G + +A +L ++I +
Sbjct: 172 -------VLAFLLLITVILMVYLTYAVEDLSEYGLIANDGSGANVVKYFAFVLLIYIAVA 224
Query: 195 FVHLF--LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ F A K++ S+ G FT I ++ + LF YI FS Y+ +Y + +++ +
Sbjct: 225 TLYYFGTKEARKARFFSV--GAFFTTILIMLTSFLFGLYIENFSNYNELYGSIGALLILM 282
Query: 253 VFLYMLGVFFILGAELNASMI 273
V++++ +LG ELNAS+I
Sbjct: 283 VYIWLNANILLLGFELNASLI 303
>gi|281491079|ref|YP_003353059.1| tRNA-processing ribonuclease BN [Lactococcus lactis subsp. lactis
KF147]
gi|281374837|gb|ADA64357.1| tRNA-processing ribonuclease BN [Lactococcus lactis subsp. lactis
KF147]
gi|326406113|gb|ADZ63184.1| tRNA-processing ribonuclease BN [Lactococcus lactis subsp. lactis
CV56]
Length = 301
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 28/261 (10%)
Query: 28 ASHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+S +SLS+ LL++FP + N+ FL H ++ + P + K I
Sbjct: 25 SSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFL--HINTTALLSFLSEQLPSDVYKGIEP 82
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI----SF 136
I +L GL ++S LA + S + AL++S+N+AY V R + ++R+I F
Sbjct: 83 VINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAYEVFNHRDFIVSRIIGLAAGF 142
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+L ++V+ +F L L V + FP +L + N + A +A F+ L+ +
Sbjct: 143 AILLFLYFSIVLSTFG----QLILEQVHRLFPFDDHLYRTLHNMTLPAIAVATFLSLMML 198
Query: 197 HLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS-TMYAGLASIMTCLVF 254
+ LP K K+ +PG IF+ ++V+ V T++I + +++ L I + +VF
Sbjct: 199 YFILPNVKIRKLRYTMPGTIFS--TFVL--VFLTNWIAKYVSFALQRLDDLKLIGSLVVF 254
Query: 255 LYMLGVFF-----ILGAELNA 270
M+ F I+GA LNA
Sbjct: 255 ALMIWFIFIARVLIIGAILNA 275
>gi|153853728|ref|ZP_01995084.1| hypothetical protein DORLON_01075 [Dorea longicatena DSM 13814]
gi|149753478|gb|EDM63409.1| hypothetical protein DORLON_01075 [Dorea longicatena DSM 13814]
Length = 274
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 7/218 (3%)
Query: 57 QFVP----TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
Q+ P V+ V +P+ + IT + QV + G+ +++ + A + + GV AL
Sbjct: 50 QYTPVTKADVMTAVLQVFPKSVDSLITSIVNQVYN-QSGGIISLTIIVALWSAGKGVLAL 108
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALG 171
LN Y E R++ I R+ + Y + A + ++I V L +V + +P +
Sbjct: 109 TTGLNCVYDCKETRNYIILRIRATFYTV-AFIIVIIFLLVLSVFGNTLNLFVTEHYPLME 167
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ I R T + LF+ + ++ FLP ++ L G F+ + W++ + +F+ Y
Sbjct: 168 RFVDQIMQIRGIITPVLLFVFTMMIYKFLPNHIVQLKVQLMGAAFSAVGWMIVSWIFSVY 227
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ F +S+MY L +I+ +++LY +LG E+N
Sbjct: 228 LNIFKGFSSMYGSLTTIVLIMLWLYFCMYILLLGGEVN 265
>gi|284043536|ref|YP_003393876.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283947757|gb|ADB50501.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 328
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 8/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVV 66
+F + + + E++ A+ ++ LLS+FP ++ ++ G G Q ++ D+V
Sbjct: 29 LFATLKRTVREYSEDNMSDWAAALTYYGLLSLFPALIALVSILGLFGDPQSTTRSLTDIV 88
Query: 67 FGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVE 124
P A I + + A G+ L AA +S++G V A + N Y E
Sbjct: 89 TRLGPSSAADTFEGPIRSITSNRGAAGVLFFVGLGAAIWSASGYVGAFTRAANIVYETPE 148
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ R + L V L +++ V + V +G+ + +W +
Sbjct: 149 GRPFWKLRPLQLLVTLAMVVMLALVALALVMTGPVVETVADSI-GIGSTAVTVWEFAKWP 207
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
MLA+ + L+F L+ + K+ + PG + + W++ + LF Y+ F +Y
Sbjct: 208 VMLAVVV-LMFAVLYHVSPNVKLPGFRWVTPGALLAIVVWLIASALFAFYVANFGSYDKT 266
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y L I+ LV+ ++ V +LG ELN+
Sbjct: 267 YGTLGGIVVLLVWFWITNVALLLGMELNSE 296
>gi|240146019|ref|ZP_04744620.1| YihY family protein [Roseburia intestinalis L1-82]
gi|257201833|gb|EEV00118.1| YihY family protein [Roseburia intestinalis L1-82]
Length = 285
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 12/238 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+LS+ PF++ ++L + + T++ ++ PE IA P ++ + + G+ +
Sbjct: 33 ILSLIPFLMVFSSLLQYTSVTE--GTLLKIIERVMPEYIA-PFLISLIDEVYNRSAGIIS 89
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL--ISFGYVLLASVTLVIMSFVF 153
I+A+ A + ++ GV+ + LN + E R+W + R+ + + + L ++ ++ VF
Sbjct: 90 ITAIVAIWSAAKGVQYMTDGLNSVNDLEETRNWLVLRMWAVVYTVIFLVAIVFTLLVIVF 149
Query: 154 VAIPLALAYVRKFFPALGNL--LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
LA ++ P L + LL + G I ML +F +IF LP K S L
Sbjct: 150 GNSLQKLA--SQYIPLLRHAVDLLAHFRGLIMLVMLIVFFDVIFTA--LPNKKLTFKSQL 205
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
PG ++W + ++ + Y+ F+ +S MY L +I +++LY ++ AE+N
Sbjct: 206 PGAAICGVAWYIFSIGVSIYVDYFNGFS-MYGSLTTIALIMLWLYFCMYIMMMSAEVN 262
>gi|314936062|ref|ZP_07843411.1| YihY family protein [Staphylococcus hominis subsp. hominis C80]
gi|313655879|gb|EFS19622.1| YihY family protein [Staphylococcus hominis subsp. hominis C80]
Length = 402
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 126/255 (49%), Gaps = 12/255 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKPIT 79
++D +A+ ++ +L++FP ++F L Q P I D+V P A +T
Sbjct: 77 KDDASGLAAQMTYHFVLALFPMLIFLLTLLPLF---QIDPQQIKDLVSQNAPAETADVVT 133
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + + L ++ + A + +SNG+ A+ S N AY V + R+ + +L+S +
Sbjct: 134 KIFKDITSNSSGSLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDARNPIVLKLLSILFT 193
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRK-FFPALGNLLLIIWN---GRIYATMLALFIGLIF 195
++ ++ L I + +P +++ F LG + W RI ++ + I +
Sbjct: 194 IVMAIVLAIA----LTLPTFGNFIKDHLFGPLGLDQQVAWIFDLVRILLPLIVIIILFLT 249
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ P K+K S+ PG IFT I W++G+ F Y+ F YS Y LA I+ L+++
Sbjct: 250 LYSVAPNVKTKFKSVYPGAIFTSIVWLLGSFAFGWYLSNFGNYSKTYGSLAGIIILLLWI 309
Query: 256 YMLGVFFILGAELNA 270
Y+ I+GAE+NA
Sbjct: 310 YITCFIIIIGAEINA 324
>gi|163850547|ref|YP_001638590.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218529263|ref|YP_002420079.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|163662152|gb|ABY29519.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218521566|gb|ACK82151.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 347
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 136/270 (50%), Gaps = 14/270 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + + A A ++ ALL+VFP + +L G + + ++ G
Sbjct: 53 DILWRVVLSLQRDRVLATAGGVAFFALLAVFPALATIVSLYGLFSDPTAIGQHLSLLAGV 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA--AYFSSN-GVEALRISLNRAYRVVEMR 126
P + ++++++++ L T S L+ A++S+N GV AL +LN YR E R
Sbjct: 113 LPNGVLDLLSEQLVRIARQSTGALSTASLLSMIIAFWSANSGVSALFDALNVIYREREKR 172
Query: 127 S---WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
S +Y+T +F + L V ++ + + V +P+ L+ + A L ++ W
Sbjct: 173 SLVGFYVT---TFLFTLTGIVFVLASTGMVVILPIVLSRIGLGGLADTALRILRWP---- 225
Query: 184 ATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A +L + + L + + P+ + +K + G + +SWV +VLF+ Y+ +F +Y+ +Y
Sbjct: 226 ALLLLVSLSLSLTYRYGPSRREAKWRWVSWGSVAASLSWVCTSVLFSWYVASFDSYNRVY 285
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
L + + + ++++ V +LGAELNA M
Sbjct: 286 GSLGAGVGFMTWIWLSVVIVLLGAELNAEM 315
>gi|39934322|ref|NP_946598.1| ribonuclease BN [Rhodopseudomonas palustris CGA009]
gi|39648170|emb|CAE26690.1| Ribonuclease BN [Rhodopseudomonas palustris CGA009]
Length = 360
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 78 ITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ +++ +VLA L F IS A + ++ GV+A+ +LN Y V E R ++ +L
Sbjct: 152 VEEQVGRVLANGQTKLGFAFLISLSLALWSANGGVKAIIDALNAVYDVEEQRGFF--KLN 209
Query: 135 SFGYVLLASVTLVIMSFV--FVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFI 191
F +L +++ + +A P+ LA + LGNL+ + + GR L F
Sbjct: 210 GFSLLLTLGALGAVLAAIGLVIAAPIVLARI-----GLGNLVAVAIDYGRWPVLALMTFG 264
Query: 192 GLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
GL ++ P S + PG I +SW+ G+ ++Y+ F+ Y+ Y L + +
Sbjct: 265 GLSLLYRTAPNRPSPPWRWVAPGSIVATLSWLAGSAALSYYLANFADYNATYGSLGAAIG 324
Query: 251 CLVFLYMLGVFFILGAELNASM 272
+++++M + + G E+NA +
Sbjct: 325 LMIWMWMTAIVVLAGGEVNAEI 346
>gi|228476335|ref|ZP_04061036.1| transporter [Staphylococcus hominis SK119]
gi|228269618|gb|EEK11124.1| transporter [Staphylococcus hominis SK119]
Length = 402
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 126/255 (49%), Gaps = 12/255 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKPIT 79
++D +A+ ++ +L++FP ++F L Q P I D+V P A +T
Sbjct: 77 KDDASGLAAQMTYHFVLALFPMLIFLLTLLPLF---QIDPQQIKDLVSQNAPAETADVVT 133
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + + L ++ + A + +SNG+ A+ S N AY V + R+ + +L+S +
Sbjct: 134 KIFKDITSNSSGSLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDARNPIVLKLLSILFT 193
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRK-FFPALGNLLLIIWN---GRIYATMLALFIGLIF 195
++ ++ L I + +P +++ F LG + W RI ++ + I +
Sbjct: 194 IVMAIVLAIA----LTLPTFGNFIKDHLFGPLGLDQQVAWIFDLVRILLPLIVIIILFLT 249
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ P K+K S+ PG IFT I W++G+ F Y+ F YS Y LA I+ L+++
Sbjct: 250 LYSVAPNVKTKFKSVYPGAIFTSIVWLLGSFAFGWYLSNFGNYSKTYGSLAGIIILLLWI 309
Query: 256 YMLGVFFILGAELNA 270
Y+ I+GAE+NA
Sbjct: 310 YITCFIIIIGAEINA 324
>gi|238923938|ref|YP_002937454.1| hypothetical protein EUBREC_1576 [Eubacterium rectale ATCC 33656]
gi|238875613|gb|ACR75320.1| hypothetical protein EUBREC_1576 [Eubacterium rectale ATCC 33656]
Length = 320
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + D +V A G +I+ + A Y SS + ++ L+ Y V E R++ +
Sbjct: 108 PESFGDIMKDLASEVYA-SGTGRLSITMITAVYLSSKAFISFQLGLDDMYHVKENRNFIL 166
Query: 131 TRLISFGYVLLASVTLVIMSFVFV-AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ S Y ++ ++ L+ + V V L Y +G+++ + + R+ + L
Sbjct: 167 RRIYSVLYSIVFALALIFLLGVMVFGNMLRKMYFSNVHHIIGSIIGSVVDYRLVICLPVL 226
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ +++FLP K + LPG +F +W++ + +F+ Y+ ++ YS+ Y + +I
Sbjct: 227 ILFFWVIYVFLPNKKRRAKYQLPGAVFAAAAWMIFSGIFSVYVDKYNNYSSFYGTMTTIA 286
Query: 250 TCLVFLYMLGVFFIL 264
+V+LY G ++L
Sbjct: 287 LIMVWLY--GCMYVL 299
>gi|89054551|ref|YP_510002.1| ribonuclease BN, putative [Jannaschia sp. CCS1]
gi|88864100|gb|ABD54977.1| ribonuclease BN putative [Jannaschia sp. CCS1]
Length = 318
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 125/260 (48%), Gaps = 14/260 (5%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ LL++FP I ++G L + + + G P+ + +TD+ V
Sbjct: 37 IAAGVAFYGLLALFPAITAVMAISGLLIEPNAIVDQLSRLGGLLPQEVIAIVTDQATAVA 96
Query: 87 AVPAKGLFTIS---ALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
GL + L A Y +S G+ +L +N AY E R + +L++FG LL
Sbjct: 97 GSREGGLGLAAIFGVLVAFYSASKGMASLMQGVNVAYDEDEERGFIRLKLVTFGLTLLLI 156
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI-GLIFVHLFLPA 202
V L++ +A+P LA++ LG ++ + ++ ++AL I GL ++ + P+
Sbjct: 157 VGLLVSLGAMLALPAVLAFID-----LGPMVEALLTAALWVGLIALTIFGLSVLYRYAPS 211
Query: 203 AKS---KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
++ K +S+ G + + W+V + F Y+ F +Y+ + L ++ L++ ++
Sbjct: 212 RENAEWKWVSL--GAVVGCVVWIVASAGFAFYVANFGSYNESFGTLGGVVVLLMWFWISA 269
Query: 260 VFFILGAELNASMIIYYWRK 279
+LGAELNA + R
Sbjct: 270 FIILLGAELNAELEAQTRRD 289
>gi|291527064|emb|CBK92650.1| Predicted membrane protein [Eubacterium rectale M104/1]
Length = 320
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + D +V A G +I+ + A Y SS + ++ L+ Y V E R++ +
Sbjct: 108 PESFGDIMKDLASEVYA-SGTGRLSITMITAVYLSSKAFISFQLGLDDMYHVKENRNFIL 166
Query: 131 TRLISFGYVLLASVTLVIMSFVFV-AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ S Y ++ ++ L+ + + V L Y +G+++ + + R+ + L
Sbjct: 167 RRIYSVLYSIVFALALIFLLGIMVFGNMLRKMYFSNVHHIIGSIIGSVVDYRLVICLPVL 226
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ +++FLP K + LPG +F +W++ + +F+ Y+ ++ YS+ Y + +I
Sbjct: 227 ILFFWVIYVFLPNKKQRAKYQLPGAVFAAAAWMIFSGIFSVYVDKYNNYSSFYGTMTTIA 286
Query: 250 TCLVFLYMLGVFFIL 264
+V+LY G ++L
Sbjct: 287 LIMVWLY--GCMYVL 299
>gi|260438511|ref|ZP_05792327.1| YihY family protein [Butyrivibrio crossotus DSM 2876]
gi|292809100|gb|EFF68305.1| YihY family protein [Butyrivibrio crossotus DSM 2876]
Length = 284
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 8/178 (4%)
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
IS ++ + + G +L LN + + E R+W++ RL Y +L ++ +++ + V
Sbjct: 89 ISGISLIWAAGKGFVSLIDGLNAVFNIKEHRNWFVIRL----YAILYTIIFLVIILLCVV 144
Query: 156 IPLALAYVRKFF----PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
I + + FF P + ++L I R + L + F+++ +P +KI
Sbjct: 145 IYVLGYRINDFFKVKAPVISDILDKILAFRALIVIFVLTVLFTFLYVAIPNRHTKIKRQF 204
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
PG +F+ + W + F+ Y S S +Y L +I+ +++LY+ F++GAE+N
Sbjct: 205 PGALFSAVGWTGFSFFFSLYFKYSSRLSEIYGSLTTIVCVMLWLYVCMYIFLMGAEIN 262
>gi|22537011|ref|NP_687862.1| ribonuclease BN [Streptococcus agalactiae 2603V/R]
gi|25010920|ref|NP_735315.1| ribonuclease BN [Streptococcus agalactiae NEM316]
gi|76787357|ref|YP_329592.1| ribonuclease BN [Streptococcus agalactiae A909]
gi|76798178|ref|ZP_00780430.1| ribonuclease BN, putative [Streptococcus agalactiae 18RS21]
gi|77405554|ref|ZP_00782645.1| ribonuclease BN, putative [Streptococcus agalactiae H36B]
gi|77409314|ref|ZP_00786018.1| ribonuclease BN, putative [Streptococcus agalactiae COH1]
gi|22533867|gb|AAM99734.1|AE014230_14 ribonuclease BN, putative [Streptococcus agalactiae 2603V/R]
gi|23095299|emb|CAD46509.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562414|gb|ABA44998.1| ribonuclease BN, putative [Streptococcus agalactiae A909]
gi|76586486|gb|EAO62992.1| ribonuclease BN, putative [Streptococcus agalactiae 18RS21]
gi|77172078|gb|EAO75243.1| ribonuclease BN, putative [Streptococcus agalactiae COH1]
gi|77175861|gb|EAO78639.1| ribonuclease BN, putative [Streptococcus agalactiae H36B]
gi|319744898|gb|EFV97232.1| YihY family protein [Streptococcus agalactiae ATCC 13813]
Length = 306
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 133/269 (49%), Gaps = 25/269 (9%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ HF + A ++ L++ FP +V AN+ + H V ++ ++ P+ I
Sbjct: 23 MRHFQSAEMDLSAIAVAYYLLVTAFPLLVIAANIFPYF--HINVSDLLSLMQKNLPKNIY 80
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+P + + + P+ G+ ++L A + S + +L+ ++N+AY V + R + I+RL+
Sbjct: 81 EPASRLAVDAFSKPSTGILGFASLTAFWTMSKSLTSLQKAINKAYGVDQHRDFVISRLVG 140
Query: 136 FGYVLLASVTLVIMSFVFV----AIPLALAYVRKFFPALGNLLLI-IWNGRIYATMLALF 190
G L + L +++FV + + P+ V + LG+ L + N T L +F
Sbjct: 141 VGTGL---IILFLLTFVLIFSTFSKPVLQIIVNMY--DLGDTLTAWLLNLAQPVTFLTIF 195
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVG--AVLFTHYIVTFSTYSTMYAGLAS 247
+G+ ++ LP A+ K+ ++PG +F+ ++V+G + L + Y++ + +
Sbjct: 196 LGIGILYFILPNARIRKVRYVIPGTLFS--TFVIGFFSNLISQYVL---NRVEKMVDIKT 250
Query: 248 IMTCLVFLYMLGVFF-----ILGAELNAS 271
+ ++F+ ML F ILGA LNAS
Sbjct: 251 FGSVVIFILMLWFIFLAHIMILGAILNAS 279
>gi|291539020|emb|CBL12131.1| Predicted membrane protein [Roseburia intestinalis XB6B4]
Length = 285
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 114/236 (48%), Gaps = 8/236 (3%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+LS+ PF++ ++L + + T++ ++ PE IA P ++ + + G+ +
Sbjct: 33 ILSLIPFLMVFSSLLQYTSVTE--GTLLKIIERVMPEYIA-PFLISLIDEVYNRSAGIIS 89
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
I+A+ A + ++ GV+ + LN + E R+W + R+ + Y ++ V +V V V
Sbjct: 90 ITAIVAIWSAAKGVQYMTDGLNSVNDLEETRNWLVLRMWAVVYTVIFLVAIVFTLLVIVF 149
Query: 156 IPLALAYVRKFFPALGNL--LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
++ P L + LL + G I ML +F +IF LP K S +PG
Sbjct: 150 GNSLQKLASQYIPLLRHAVDLLAHFRGLIMLAMLIVFFDVIFTA--LPNKKLTFKSQIPG 207
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
++W + ++ + Y+ F+ +S MY L +I +++LY ++ AE+N
Sbjct: 208 AAICGVAWYIFSIGVSIYVDYFNGFS-MYGSLTTIALIMLWLYFCMYIMMMSAEVN 262
>gi|116492143|ref|YP_803878.1| ribonuclease BN-like family protein [Pediococcus pentosaceus ATCC
25745]
gi|116102293|gb|ABJ67436.1| Ribonuclease BN-like family enzyme [Pediococcus pentosaceus ATCC
25745]
Length = 300
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%), Gaps = 4/237 (1%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG-LF 94
LLS FP ++ +L V TV++ + P I IT+ I++ G L
Sbjct: 38 LLSFFPMVMLMGSLLPLFDIK--VNTVLEYIETVVPVTIYN-ITEPIVKDFLGSGNGELL 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV 154
+ S L Y +S V A + ++NRAY V + ++ + R+++F ++ + I+ F+F
Sbjct: 95 SFSLLLTIYSASQAVAAFQRTINRAYDVAKHQNPIVNRIVAFVLTVIIIAIMGILVFLFS 154
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
++Y+ +L +I + T++ LF+GL ++ +P AK K ++PG
Sbjct: 155 FGQTLISYLTPILNLPTHLFDLIGQLKWPVTIVGLFVGLALLYYLVPNAKIKFKYVIPGS 214
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
I I ++ + F+ Y+ F+ T Y L + + + +L + + G LNA+
Sbjct: 215 IAATIGTMIISQFFSFYLRIFARSVTSYKTLGTFIAIMFWLNFSAMVVMFGGVLNAT 271
>gi|291536120|emb|CBL09232.1| Predicted membrane protein [Roseburia intestinalis M50/1]
Length = 285
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 114/236 (48%), Gaps = 8/236 (3%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+LS+ PF++ ++L + + T++ ++ PE IA P ++ + + G+ +
Sbjct: 33 ILSLIPFLMVFSSLLQYTSVTE--GTLLKIIERVMPEYIA-PFLISLIDEVYNRSAGIIS 89
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
I+A+ A + ++ GV+ + LN + E R+W + R+ + Y ++ V +V V V
Sbjct: 90 ITAIVAIWSAAKGVQYMTDGLNSVNDLEETRNWLVLRMWAVVYTVIFLVAIVFTLLVIVF 149
Query: 156 IPLALAYVRKFFPALGNL--LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
++ P L + LL + G I ML +F +IF LP K S +PG
Sbjct: 150 GNSLQKLASQYIPLLRHAVDLLAHFRGLIMLVMLIVFFDVIFTA--LPNKKLTFKSQIPG 207
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
++W + ++ + Y+ F+ +S MY L +I +++LY ++ AE+N
Sbjct: 208 AAICGVAWYIFSIGVSIYVDYFNGFS-MYGSLTTIALIMLWLYFCMYIMMMSAEVN 262
>gi|320108330|ref|YP_004183920.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
gi|319926851|gb|ADV83926.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
Length = 324
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 11/260 (4%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG---AHQFVPTVIDVVFGAWPEVIAK 76
+E++ + AS ++ ++FP ++ +++ G H +V ++D + P
Sbjct: 45 IEDNLFGRASQLAYYFFFALFPTLIAMSSVMGLAAKSATHIYV-QLLDKIASLVPPAAFG 103
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ D Q + T+ L A + +S GV A++ +LN Y+V E RS++ R
Sbjct: 104 IVMDTFHQTTQASSTRKVTLGLLTALWSASVGVSAIQDTLNAVYKVKETRSYWRAR--GE 161
Query: 137 GYVLLASVTLVIMSFV--FVAIPLALAYVR-KFFPALGNLLLIIWNGRIYATMLALFIGL 193
VL +V+LV+ + + + + VR KF A+ + I AT+L + I
Sbjct: 162 AMVLTIAVSLVLTAALGALLGGSIGAELVRYKFSGAIAVSIATRTVAWIVATLLMVLI-F 220
Query: 194 IFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ F P K K PG + WV+G++ Y+ F +YS Y L +++ L
Sbjct: 221 ALLYFFSPDVQKRKWHWFSPGSAIGLLGWVLGSLGLRLYLHWFDSYSVTYGSLGAVIILL 280
Query: 253 VFLYMLGVFFILGAELNASM 272
+ Y+ G+ +LGAE+N+ +
Sbjct: 281 TWFYVAGLMLLLGAEVNSEI 300
>gi|108763366|ref|YP_632756.1| YihY family protein [Myxococcus xanthus DK 1622]
gi|108467246|gb|ABF92431.1| YihY family protein [Myxococcus xanthus DK 1622]
Length = 359
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL T+ + A + +S GV AL +LN+ Y V E R + R I+ L + ++ +F
Sbjct: 94 GLLTVGGVGAVWAASAGVVALMTALNKVYGVTESRPIWKLRGIALLVTLGGAAVAILAAF 153
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
+ P+ K LG +L+ W A +L +F+ + ++ LP K I
Sbjct: 154 AVIVTPV---IAGKLPGGLGTVLM--WLRLPVAGLLMMFLWAVLYYV-LPDVNQKFRFIT 207
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
PG + + WV + F+ Y+ F Y Y + ++ L+++++ +LGAE+NA
Sbjct: 208 PGSVVGVLIWVFASWGFSQYVANFGKYDVNYGAIGGVIVMLLWMWISAQVILLGAEINA 266
>gi|291525349|emb|CBK90936.1| Predicted membrane protein [Eubacterium rectale DSM 17629]
Length = 335
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 96/195 (49%), Gaps = 4/195 (2%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + D +V A G +I+ + A Y SS + ++ L+ Y V E R++ +
Sbjct: 123 PESFGDIMKDLASEVYA-SGTGRLSITMITAVYLSSKAFISFQLGLDDMYHVKENRNFIL 181
Query: 131 TRLISFGYVLLASVTLVIMSFVFV-AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ S Y ++ ++ L+ + + V L Y +G+++ + + R+ + L
Sbjct: 182 RRIYSVLYSIVFALALIFLLGIMVFGNMLRKMYFSNVHHIIGSIIGSVVDYRLVICLPVL 241
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ +++FLP K + LPG +F +W++ + +F+ Y+ ++ YS+ Y + +I
Sbjct: 242 ILFFWVIYVFLPNKKQRAKYQLPGAVFAAAAWMIFSGIFSVYVDKYNNYSSFYGTMTTIA 301
Query: 250 TCLVFLYMLGVFFIL 264
+V+LY G ++L
Sbjct: 302 LIMVWLY--GCMYVL 314
>gi|109900439|ref|YP_663694.1| putative ribonuclease BN [Pseudoalteromonas atlantica T6c]
gi|109702720|gb|ABG42640.1| putative ribonuclease BN [Pseudoalteromonas atlantica T6c]
Length = 320
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 126/275 (45%), Gaps = 22/275 (8%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI+ ++ ++++ +A+ + LL+VFP +V ++ G L + + ++ + G
Sbjct: 21 WDILRRTVKKMLDDNLSLIAAGVGFYFLLAVFPLLVAFISIYGLLVSPDELQQHLNQLIG 80
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ + I+ ++ ++++ L T S L A + +S G +A+ + N Y +
Sbjct: 81 VVPDQGRQIISQQVERIMSKSNTALSTGVVFSTLFAVWSASKGAQAMVTACNITYGQNQN 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + ++ A + LV F +P+ +YV A +L+ W
Sbjct: 141 RGFLMMLVMRVLLTASAVMLLVAALFTIAVLPILFSYVGLHHYAS---ILVQW------- 190
Query: 186 MLALFIGLIFVHLFLPA--------AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ F+ L+F +L L A + +K + PG + WV + F+ Y+ F
Sbjct: 191 LTWPFLALVF-NLALSAFYRYGPHRSTAKWRWVTPGSLLASTLWVAFSFAFSFYLGQFGQ 249
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y MY L S++ L++ Y+ +LGAE NA+M
Sbjct: 250 YDKMYGSLGSVVVLLMWFYLTAYIILLGAEFNAAM 284
>gi|77410710|ref|ZP_00787069.1| ribonuclease BN, putative [Streptococcus agalactiae CJB111]
gi|77163246|gb|EAO74198.1| ribonuclease BN, putative [Streptococcus agalactiae CJB111]
Length = 306
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 133/270 (49%), Gaps = 25/270 (9%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ HF + A ++ L++ FP +V AN+ + H V ++ + P+ I
Sbjct: 23 MRHFQSAEMDLSAIAVAYYLLVTAFPLLVIAANIFPYF--HINVSDLLSFMQKNLPKNIY 80
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+P + + + P+ G+ ++L A + S + +L+ ++N+AY V + R + I+RL+
Sbjct: 81 EPASRLAVDAFSKPSTGILGFASLTAFWTMSKSLTSLQKAINKAYGVDQHRDFVISRLVG 140
Query: 136 FGYVLLASVTLVIMSFVFV----AIPLALAYVRKFFPALGNLLLI-IWNGRIYATMLALF 190
G L + L +++FV + + P+ V + LG+ L + N T L +F
Sbjct: 141 VGTGL---IILFLLTFVLIFSTFSKPVLQIIVNMY--DLGDTLTAWLLNLAQPVTFLTIF 195
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVG--AVLFTHYIVTFSTYSTMYAGLAS 247
+G+ ++ LP A+ K+ ++PG +F+ ++V+G + L + Y++ + +
Sbjct: 196 LGIGILYFILPNARIRKVRYVIPGTLFS--TFVIGFFSNLISQYVL---NRVEKMVDIKT 250
Query: 248 IMTCLVFLYMLGVFF-----ILGAELNASM 272
+ ++F+ ML F ILGA LNAS+
Sbjct: 251 FGSVVIFILMLWFIFLAHIMILGAILNASV 280
>gi|160893025|ref|ZP_02073813.1| hypothetical protein CLOL250_00563 [Clostridium sp. L2-50]
gi|156865108|gb|EDO58539.1| hypothetical protein CLOL250_00563 [Clostridium sp. L2-50]
Length = 307
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 88/174 (50%)
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
ISA+ A + ++ G A+ LN R + +++ + RL + Y L+ V L+ ++ V+V
Sbjct: 106 ISAIVAIWSAAKGTMAIERGLNFMDRTKDTKNYILRRLTNALYTLIFCVMLIALAGVYVL 165
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ + + + + R+ + +F ++ ++ LP ++ + +PG +
Sbjct: 166 GNTIMEDILAKTNWVDYSEKVFFYSRLLTAPVLVFAVILLIYCRLPDNHLRLKTAIPGAV 225
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
FT + WV+ + F+ Y+ F + MY L S++ +++LY+ +LGAELN
Sbjct: 226 FTTVCWVLLSAAFSSYLTYFGINTYMYGNLGSMVIAMLWLYICMYILLLGAELN 279
>gi|171779627|ref|ZP_02920583.1| hypothetical protein STRINF_01464 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281729|gb|EDT47163.1| hypothetical protein STRINF_01464 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 306
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 24/260 (9%)
Query: 28 ASHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++ I LSA LL+ FP IV AN+ +L V ++ + P + ++
Sbjct: 28 SAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--VNILLAFMKKNLPTNLYPSVSA 85
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ + + P+ + ++ L A + S + +L+ ++N+AY V + R + I RL+ V+
Sbjct: 86 ITIDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVAQHRDFVIGRLVG---VI 142
Query: 141 LASVTLVIMSFVFVAIPLA---LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ + L +++FV + + L + ++ + +I N T+L + IGL+ ++
Sbjct: 143 GSLLILFLLTFVLIFSTFSKAILQVINSYYDLSDTMATVILNLAQPVTVLTIVIGLMLLY 202
Query: 198 LFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
LP + + ILPG IFT + V LF+ YI+ T+ M + + + ++F+
Sbjct: 203 FILPNVRIRRFRYILPGTIFTSVVIVFLNNLFSSYIL--RTFERM-VDIKTFGSVVIFVL 259
Query: 257 MLGVFF-----ILGAELNAS 271
ML F ILGA NA+
Sbjct: 260 MLWFIFLAHILILGAIFNAT 279
>gi|222153325|ref|YP_002562502.1| ribonuclease BN-like family protein [Streptococcus uberis 0140J]
gi|222114138|emb|CAR42618.1| ribonuclease BN-like family protein [Streptococcus uberis 0140J]
Length = 315
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 126/266 (47%), Gaps = 19/266 (7%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ HFV + + ++ +++VFP I+ AN+ +L + ++ ++ + P I
Sbjct: 24 MRHFVSAEMDLSSIAVAYYLIITVFPLIIIAANIFPYLNID--ISDLLSLMKQSLPVDIY 81
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
KP + + + PA G+ ++ +A + S + +L+ ++N+AY V E R + ++ +I
Sbjct: 82 KPAAAVVTNIFSKPAGGILGMATVAGLWTMSRSLTSLQKAVNKAYGVSEHRDFLVSHIIG 141
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVR---KFFPALGNL----LLIIWNGRIYATMLA 188
+ ++ L +++FV + + A ++ + + N+ LL+I T++
Sbjct: 142 ---LFISVFILFLLTFVLIFSTFSKATIQLLDRHYHLSDNVTSLFLLLIQP----TTIVI 194
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F G++ ++ LP K KI ILPG IFT + + +Y+V S
Sbjct: 195 IFSGIMVLYFLLPNVKIRKIRYILPGTIFTAFVMTFMSNMIANYVVHNVERMVDIKAFGS 254
Query: 248 IMTCLVFLY--MLGVFFILGAELNAS 271
IM ++ L+ L I GA NA+
Sbjct: 255 IMIFIIMLWFIFLARILIFGAICNAT 280
>gi|94968858|ref|YP_590906.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
gi|94550908|gb|ABF40832.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
Length = 341
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 4/240 (1%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+LS+FP ++ A + L ++ V P+ K ++ + V+ + L +
Sbjct: 74 VLSLFPALIALAAVVSLLPMPDLFQNIMSVFGRVLPDESMKLVSKVVADVIRPHSGRLLS 133
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+ + + +S+G + SLN AY V E R+W+ TRL++ G LL L +
Sbjct: 134 FGLIGSLWTASSGFSGMIESLNVAYGVPETRAWWKTRLLAIGLTLLVGGMLTVSILCMTV 193
Query: 156 IPLALA-YVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL-PAAKSKIMSILPG 213
P L + K G + L+ W + AL + I FL P + M L G
Sbjct: 194 GPHFLEIFADKI--GFGPMFLLTWKIVRWPIAFALVVLSIEAIYFLAPNVRQHFMHTLTG 251
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ +WVV ++ Y F+ ++ Y L + + L +LY + ++G E+N+ +I
Sbjct: 252 ALIAVGAWVVLSLALGVYFGKFAHFNKTYGVLGAAIGLLTWLYWTSLAILVGGEVNSEII 311
>gi|153813966|ref|ZP_01966634.1| hypothetical protein RUMTOR_00173 [Ruminococcus torques ATCC 27756]
gi|145848362|gb|EDK25280.1| hypothetical protein RUMTOR_00173 [Ruminococcus torques ATCC 27756]
Length = 236
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 107/216 (49%), Gaps = 11/216 (5%)
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ V +PE +A P+ I+ + + + ++ + A + + GV ++ LN
Sbjct: 4 VMTAVLKVFPESVA-PMIRSIVSQVYFQSGTIVPVTIVVALWSAGKGVLSVTSGLNSICE 62
Query: 122 VVEMRSWYITRLISFGYV---LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+E R+++ R+ + Y LLA V+ +++S VF + Y + P L ++ I
Sbjct: 63 NMETRNYFYLRIRASFYTVIFLLAIVSSLVLS-VFGNRISVMIY--EHIPFLSKVVEFII 119
Query: 179 NGRIYATMLALFIGLIFVHLFLPA----AKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
R + T + L + V+ FLP AK+ + LPG +FT W++ + F+ Y+
Sbjct: 120 RIRTFVTFVVLTVFWDLVYRFLPNRRNMAKTTLRKQLPGAVFTACGWLLLSFFFSVYLDV 179
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F +++MY L +I+ +++LY +LG E+NA
Sbjct: 180 FKGFTSMYGSLTTIILIMLWLYGCMYIILLGGEINA 215
>gi|294010161|ref|YP_003543621.1| putative ribonuclease BN [Sphingobium japonicum UT26S]
gi|292673491|dbj|BAI95009.1| putative ribonuclease BN [Sphingobium japonicum UT26S]
Length = 323
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 5/251 (1%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ +L+++FPF + A +A G Q + P +A+ +
Sbjct: 50 NDGFIHAGNLAYLSLMTLFPFFIVAAAVASIFGRSQDGLAAVGAFLETVPPGVAEVVRQP 109
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I+ VL L + L + + +E +R L RAY R ++ RL + G + L
Sbjct: 110 IVDVLNARTGPLLWLGGLVGLWTVGSLIETIRDILRRAYGTRSTRPFWHYRLTAIG-ITL 168
Query: 142 ASVTLVIMSFVFVAIPLAL-AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
SV V+ +F I + ++ + P + I+ ++ A M L + L ++++ L
Sbjct: 169 VSVFAVMFAFSMQVIITGIDQFLHQILPFADQAIQIVSLTKL-APMAILCVALYYLYVSL 227
Query: 201 PAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+ K PG I T + W +L + Y Y LA +M L+F +++
Sbjct: 228 TPSLYKDPRFPKWPGAIATALWWYGVTLLLPVTLSMLGGYDMTYGSLAGVMITLIFFFLV 287
Query: 259 GVFFILGAELN 269
G+ ++GAELN
Sbjct: 288 GLGVVIGAELN 298
>gi|331088034|ref|ZP_08336955.1| hypothetical protein HMPREF1025_00538 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330408990|gb|EGG88449.1| hypothetical protein HMPREF1025_00538 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 292
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 15/225 (6%)
Query: 57 QFVP----TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
+F P V+ V +PE +A P+ I+ + + + ++ + A + + GV ++
Sbjct: 51 RFTPITMSEVMTAVLKVFPESVA-PMIRSIVSQVYFQSGTIVPVTIVVALWSAGKGVLSV 109
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYV---LLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
LN +E R+++ R+ + Y LLA V+ +++S VF + Y + P
Sbjct: 110 TSGLNSICENMETRNYFYLRIRASFYTVIFLLAIVSSLVLS-VFGNRISVMIY--EHIPF 166
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA----AKSKIMSILPGVIFTWISWVVGA 225
L ++ I R + T + L + V+ FLP AK+ + LPG +FT W++ +
Sbjct: 167 LSKVVEFIIRIRTFVTFVVLTVFWDLVYRFLPNRRNMAKTTLRKQLPGAVFTACGWLLLS 226
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F+ Y+ F +++MY L +I+ +++LY +LG E+NA
Sbjct: 227 FFFSVYLDVFKGFTSMYGSLTTIILIMLWLYGCMYIILLGGEINA 271
>gi|332662794|ref|YP_004445582.1| ribonuclease BN [Haliscomenobacter hydrossis DSM 1100]
gi|332331608|gb|AEE48709.1| ribonuclease BN [Haliscomenobacter hydrossis DSM 1100]
Length = 344
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 133/282 (47%), Gaps = 25/282 (8%)
Query: 12 IYDAIEHFVEE----DGWAMASHISLSALLSVFPFIVFGANLAGFLG---------AHQF 58
IY+ ++ F++E D + A+ I+ S LS+FP ++ L +L F
Sbjct: 41 IYNVVKFFIQEVQRFDLFTRANSIAYSFFLSLFPSLIALFTLIPWLKRTFLHYLPEGENF 100
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + + P K + I + P L +I ++A YFSSNG+ +L S ++
Sbjct: 101 DHFLQNEIQKIMPGDAGKQLFGFIEDITNNPRIALLSIGFVSAIYFSSNGILSLLRSFDK 160
Query: 119 AYR-VVEMRSW---YITRLISFGY--VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
Y + SW ++ L++F +L+ASV LVI+ F I ++ F A +
Sbjct: 161 TYEDFAKWNSWKMRWVAILLTFQLSGLLIASVILVILGQSF--IKTINNWLNLSFLAEQS 218
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L ++ W A + ++ + ++ A K PG ++ +V+F+ Y+
Sbjct: 219 LNMVRW----LAIIALYYVSIALIYRNGAAMIRKFKFFTPGAALASTLCLLSSVIFSMYV 274
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
F+TY+ +Y + +I+ ++++ M + ++G ELNAS++I
Sbjct: 275 DMFNTYNRLYGSIGAIIVLMLWIQMNVMSILIGFELNASIVI 316
>gi|317501494|ref|ZP_07959692.1| hypothetical protein HMPREF1026_01636 [Lachnospiraceae bacterium
8_1_57FAA]
gi|316897123|gb|EFV19196.1| hypothetical protein HMPREF1026_01636 [Lachnospiraceae bacterium
8_1_57FAA]
Length = 294
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 15/225 (6%)
Query: 57 QFVP----TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
+F P V+ V +PE +A P+ I+ + + + ++ + A + + GV ++
Sbjct: 53 RFTPITMSEVMTAVLKVFPESVA-PMIRSIVSQVYFQSGTIVPVTIVVALWSAGKGVLSV 111
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYV---LLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
LN +E R+++ R+ + Y LLA V+ +++S VF + Y + P
Sbjct: 112 TSGLNSICENMETRNYFYLRIRASFYTVIFLLAIVSSLVLS-VFGNRISVMIY--EHIPF 168
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA----AKSKIMSILPGVIFTWISWVVGA 225
L ++ I R + T + L + V+ FLP AK+ + LPG +FT W++ +
Sbjct: 169 LSKVVEFIIRIRTFVTFVVLTVFWDLVYRFLPNRRNMAKTTLRKQLPGAVFTACGWLLLS 228
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F+ Y+ F +++MY L +I+ +++LY +LG E+NA
Sbjct: 229 FFFSVYLDVFKGFTSMYGSLTTIILIMLWLYGCMYIILLGGEINA 273
>gi|220918325|ref|YP_002493629.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956179|gb|ACL66563.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-1]
Length = 338
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
A Q V + V P + K + D I Q+ A L AL A + +S AL
Sbjct: 61 AQQLVHQLAQVA----PGEVTKIVGDRIQQLGAQQNVTLLGFGALGALWAASGATLALMR 116
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI-PLALAYVRKFFPALGNL 173
SLN AY V E R ++ R I+ ++A V ++ + VA PLA A + A
Sbjct: 117 SLNTAYDVGESRPFWKVRAIALLMTVVAGVLALVGALAAVATEPLANAIGGRAGAA---- 172
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I+W A ++ +F+ ++ LP + + I PG +F + WV+ + F Y+
Sbjct: 173 --ILWLRLPVAALVMMFL-WALLYYVLPDVEQRFKFITPGSVFGVVLWVLASWGFGKYVA 229
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F Y Y +A ++ L ++++ + ++GAE+NA
Sbjct: 230 NFGHYDKTYGSIAGVIVLLFWMWLSALVLLVGAEINA 266
>gi|197123527|ref|YP_002135478.1| ribonuclease BN [Anaeromyxobacter sp. K]
gi|196173376|gb|ACG74349.1| ribonuclease BN [Anaeromyxobacter sp. K]
Length = 338
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
A Q V + V P + K + D I Q+ A L AL A + +S AL
Sbjct: 61 AQQLVHQLAQVA----PGEVTKIVGDRIQQLGAQQNVTLLGFGALGALWAASGATLALMR 116
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI-PLALAYVRKFFPALGNL 173
SLN AY V E R ++ R I+ ++A V ++ + VA PLA A + A
Sbjct: 117 SLNTAYDVGESRPFWKVRAIALLMTVVAGVLALVGALAAVATEPLANAIGGRAGAA---- 172
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I+W A ++ +F+ ++ LP + + I PG +F + WV+ + F Y+
Sbjct: 173 --ILWLRLPVAALVMMFL-WALLYYVLPDVEQRFKFITPGSVFGVVLWVLASWGFGKYVA 229
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F Y Y +A ++ L ++++ + ++GAE+NA
Sbjct: 230 NFGHYDKTYGSIAGVIVLLFWMWLSALVLLVGAEINA 266
>gi|302869239|ref|YP_003837876.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|302572098|gb|ADL48300.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
Length = 363
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 15/266 (5%)
Query: 16 IEHFVEED--GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
++ F ++ WA A ++ +LS+FP ++ ++ G LG + V D V A PE
Sbjct: 69 VQEFQDDSLTDWAAA--LTYYGVLSIFPGVLVLISVLGLLG-ERATEGVRDTVGQAVPEE 125
Query: 74 IAKPITDEILQVLAVPAKGLFTISA---LAAAYFSSNG-VEALRISLNRAYRVVEMRSWY 129
+ I + + A + GL +I+A L AA++S++G V A + N Y V E R +
Sbjct: 126 NIRRIIESAID-QAGQSGGLASIAAIVGLVAAFWSASGYVAAFMRASNSIYDVPEGRPIW 184
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
T + G + V L+I S V V LA LG + +WN + +L L
Sbjct: 185 KTLPVRLGVTAVIGVMLLI-SAVIVVFTGGLAEQAGNAIGLGETAVTVWNIAKWPVLLVL 243
Query: 190 FIGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L+F L+ + ++ + PG + + W+V + LF Y+ F +Y+ Y +A
Sbjct: 244 -VSLMFAILYWASPNARHGGFRWVSPGGVLAVVLWLVVSGLFALYVSNFGSYNKTYGAVA 302
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
++ LV+L++ V +LGAE +A +
Sbjct: 303 GVIIFLVWLWLSNVAILLGAEFDAEL 328
>gi|153812966|ref|ZP_01965634.1| hypothetical protein RUMOBE_03373 [Ruminococcus obeum ATCC 29174]
gi|149830913|gb|EDM86003.1| hypothetical protein RUMOBE_03373 [Ruminococcus obeum ATCC 29174]
Length = 320
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 123/258 (47%), Gaps = 9/258 (3%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
++ E+ A A+ + ++S PF++ L Q+ P ++ A +
Sbjct: 38 VKRMQEDHIGAYAAQAAYFLIMSFIPFVLVLTALV------QYTPLTYRMLRQAILGFVP 91
Query: 76 KPITDEILQVLA---VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ D +L+++A + + IS L A + S G+++L LN Y V E R+W R
Sbjct: 92 LNLQDFVLKIIAEVFTKSAAVVPISGLFALWSSGKGMQSLIAGLNVIYHVKETRNWLTNR 151
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L S Y+ L + ++I + V A + P LG +L + + + + + LF+
Sbjct: 152 LYSMLYMFLFVLAIIISLLLLVMGNRIHAALVIHAPLLGRMLGRLLSAKTFLVFVVLFLV 211
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ +LP K+ + S +PG ++W + + F+ Y F +S MY L++++ +
Sbjct: 212 FLVLYRYLPNRKASLKSQVPGAFIIAVAWSLFSYFFSLYFTFFPNFSNMYGSLSALIMVM 271
Query: 253 VFLYMLGVFFILGAELNA 270
++LY+ + GAE+NA
Sbjct: 272 LWLYVCMNLLLYGAEINA 289
>gi|312869802|ref|ZP_07729944.1| YihY family protein [Lactobacillus oris PB013-T2-3]
gi|311094648|gb|EFQ52950.1| YihY family protein [Lactobacillus oris PB013-T2-3]
Length = 302
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 16/264 (6%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ HF + A+ ++ LLS+FP ++ NL +G TV+ + A P +
Sbjct: 16 MRHFTMAQISSSAAMLAYYTLLSIFPAVLVIGNLLPMVGLD--ADTVLSYLQTAVPSSVY 73
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I I L + GL T AL A + +S G+ A + S+N Y V ++ I R++S
Sbjct: 74 VFIKPLIYDFLRQGSGGLLTTGALIALWSTSQGIAAFQRSVNLTYDVARNQNPVINRVVS 133
Query: 136 FGY----VLLASVTLVIMSF---VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
F + ++L +++ F V +I L + R++ +L R +
Sbjct: 134 FIWMIVVIILIYAIVLLYGFGEQVLNSIQPLLQFNRRYISLFNSL-------RWPVALAV 186
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LFI L ++ F+P AK ++ G + + W+ + LF++Y V F Y + +
Sbjct: 187 LFIALTLLYYFVPNAKVRLRYAATGALLAALLWMGLSRLFSYYTVFFRHSVVSYKTIGAF 246
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ +++L + G +LGA LNA++
Sbjct: 247 IAMMIWLDLSGYVIMLGAVLNATL 270
>gi|146301229|ref|YP_001195820.1| putative ribonuclease BN [Flavobacterium johnsoniae UW101]
gi|146155647|gb|ABQ06501.1| putative ribonuclease BN [Flavobacterium johnsoniae UW101]
Length = 307
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 129/277 (46%), Gaps = 11/277 (3%)
Query: 12 IYDAIEHF---VEEDGWA-MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+YD +E + + E ++ AS +S S +++FPF +F NL F+ F + V
Sbjct: 35 LYDLLEMYTLGILEGAFSYHASAVSFSFFMALFPFALFILNLIPFIPIDNFQEDFLQFVQ 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ P I+ I +L GL + L + + +NG+ + + V + R
Sbjct: 95 QSVPPNTYDAISKIISDILNNSHSGLLSSGFLLSIFLMANGINGILSGFESSKHVFDKRG 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVA-IPLALAYVRKFF--PALGNLLLIIWNGRIYA 184
++ L++ L+ +V L FV VA I + +++K L + + +I GR
Sbjct: 155 FFRQYLVALAISLVMTVIL----FVTVATIVVFEVFIQKTIIQDVLSDRIPLIILGRYLF 210
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + I + + +K+ I G +FT + V+ + F +++ FS Y+ +Y
Sbjct: 211 VILMILITSSILLRYGTKQYNKVPFISIGSVFTTVLIVISSFFFGIWVIKFSKYNELYGS 270
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ +++ + ++++ + +LG ELNAS+ +K+
Sbjct: 271 IGTLLILMFYIWINCMILLLGFELNASIRKLKQKKEK 307
>gi|255024064|ref|ZP_05296050.1| transport protein [Listeria monocytogenes FSL J1-208]
Length = 214
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 10/194 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ D A+ ++ L S+FP ++ A L +L H +V +++ P+ I + +
Sbjct: 27 KNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYL--HIDKDSVFNMIKEFAPDQIMDFLEE 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS--FGY 138
+ +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S F
Sbjct: 85 NLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSXFFTL 144
Query: 139 VLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+LA+V ++ VF I + L F L WN R T++ +F+ F+
Sbjct: 145 AMLATVGATLLLLVFGQQIGMFLINHLNFSED----FLSFWNNLRWTVTLIVIFVVFTFL 200
Query: 197 HLFLPAAKSKIMSI 210
+ P +S ++S+
Sbjct: 201 YWVAPNRRSTLISV 214
>gi|154252348|ref|YP_001413172.1| putative ribonuclease BN [Parvibaculum lavamentivorans DS-1]
gi|154156298|gb|ABS63515.1| putative ribonuclease BN [Parvibaculum lavamentivorans DS-1]
Length = 322
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 91/173 (52%), Gaps = 5/173 (2%)
Query: 101 AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL 160
A + ++N V+AL ++N AY E RS+ L+SF + L A V+ +P AL
Sbjct: 123 ALWSANNSVKALFEAMNVAYEEEEKRSFVKRHLVSFSFTLGAIAIGVLFLLTVGIVPAAL 182
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWI 219
A +R + L+ + GR ++A+ I + ++ + P+ + +K+ + G +
Sbjct: 183 AVLR--IESWAETLIRL--GRWPVMLIAVGIAISLIYRYGPSREHAKLRWLSWGAALATL 238
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
W+ +V F++Y+ F+ Y+ Y L +++ +++ ++ + ++GAE+NA M
Sbjct: 239 VWIAASVGFSYYLENFANYNATYGALGAVIGLMMWTWISVMIILIGAEINAEM 291
>gi|322412067|gb|EFY02975.1| Ribonuclease BN [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
Length = 318
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 29/276 (10%)
Query: 13 YDAIEHFVEEDGWAMASHISLSAL-------LSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
Y+ I+ F+ +S + LS++ L+ FP I+ AN+ +L + ++ +
Sbjct: 16 YEPIQAFMRH---FQSSEMDLSSIAVAYYLILTAFPLIIIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I KP + ++ + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFKPASSIVVNIFSKPSGSVLGVATLTGFWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR---KFFPALGNL----LLIIW 178
R ++I L+ +L + + L +++F + + A ++ + N+ LL+I
Sbjct: 131 RDFFIGHLVG---LLTSLIILFLLTFALIFSTFSKAAIQVLDNHYNLSDNITTAFLLLIQ 187
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
T+L +F+GL+ ++ LP K KI ILPG IFT + L +Y+V
Sbjct: 188 P----ITVLIIFVGLMLLYFLLPNVKIKKIRYILPGTIFTSFVMTFLSNLVGNYVVHNVE 243
Query: 238 YSTMYAGLASIMTCLVFLY--MLGVFFILGAELNAS 271
S+M ++ L+ L ILGA NA+
Sbjct: 244 KMVDIKTFGSVMIFIIMLWFIFLARILILGAIFNAT 279
>gi|108760431|ref|YP_634071.1| YihY family protein [Myxococcus xanthus DK 1622]
gi|108464311|gb|ABF89496.1| YihY family protein [Myxococcus xanthus DK 1622]
Length = 348
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 2/194 (1%)
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
IT + ++ P L T + + +S GV ALR +LN AY V E R + T+ ++
Sbjct: 82 ITGHLQSLVNQPQPKLLTAGLVITLWSASRGVNALRTALNLAYDVSESRPLWKTQGLAML 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
LL S+ L+ +SF + L L + ++W+ R T + + L
Sbjct: 142 VTLLGSL-LIPLSFAAFLLGGRLGLWLAGKLQLVDAFHLVWSWLRWPFTASLVMLVLALC 200
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ LP K + I PG + W+ FT Y+ F Y+ Y + +M L++LY
Sbjct: 201 YYLLPDVKQRFKYITPGSVLGTGLWLTSTWGFTQYVEHFGKYNVTYGSIGGVMVLLLWLY 260
Query: 257 MLGVFFILGAELNA 270
+ G+ FI+G E+NA
Sbjct: 261 LSGLIFIVGGEVNA 274
>gi|315504286|ref|YP_004083173.1| ribonuclease bn [Micromonospora sp. L5]
gi|315410905|gb|ADU09022.1| ribonuclease BN [Micromonospora sp. L5]
Length = 363
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 13/255 (5%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQ 84
WA A ++ +LS+FP ++ ++ G LG + V D V A PE + I + +
Sbjct: 80 WAAA--LTYYGVLSIFPGVLVLISVLGLLG-DRATEGVRDTVGQAVPEENIRRIIESAID 136
Query: 85 VLAVPAKGLFTISA---LAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
A + GL +I+A L AA++S++G V A + N Y V E R + T + G
Sbjct: 137 -QAGQSGGLASIAAIVGLVAAFWSASGYVAAFMRASNSIYDVPEGRPIWKTLPVRLGVTA 195
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ V L+I S V V LA LG + +WN + +L L + L+F L+
Sbjct: 196 VIGVMLLI-SAVIVVFTGGLAEQAGNAIGLGETAVTVWNIAKWPVLLVL-VSLMFAILYW 253
Query: 201 PAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+ ++ + PG + + W+V + LF Y+ F +Y+ Y +A ++ LV+L++
Sbjct: 254 ASPNARHGGFRWVSPGGVLAVVLWLVVSGLFALYVSNFGSYNKTYGAVAGVIIFLVWLWL 313
Query: 258 LGVFFILGAELNASM 272
V +LGAE +A +
Sbjct: 314 SNVAILLGAEFDAEL 328
>gi|186683817|ref|YP_001867013.1| ribonuclease BN [Nostoc punctiforme PCC 73102]
gi|186466269|gb|ACC82070.1| putative ribonuclease BN [Nostoc punctiforme PCC 73102]
Length = 299
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 134/285 (47%), Gaps = 25/285 (8%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + + +E +AS I+ +A+LS+FP I+ L A +
Sbjct: 8 RFFYYLNWRTLKKTFARTMERRLLGLASEIAFNAMLSLFPAIL------AVLTAIGLLAE 61
Query: 62 VIDVVFGAWPEVIAKPITDEIL---------QVLAVPAKGLFTISALAAAYFSSNGVEAL 112
+ F +++ + +E L ++ GLF++S + A + +S V
Sbjct: 62 SLQATFKQLAAQLSQILPEEALVLIRDFATTEITNSRNSGLFSLSFVLAIWTASGAVSTA 121
Query: 113 RISLNRAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSF-VFVAIPLALAYVRKFFPA 169
+L++ +++ MR ++ +L+S G + + LV+ SF VF + L VR+
Sbjct: 122 MTALDQIHQIPSENMRPFWKAKLVSLGLTVGTMLLLVLASFLVFTSDWLLGMVVREN--- 178
Query: 170 LGNLLLIIWNGRIYATMLALFIGLI---FVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
G+L++++ ++ LAL I + FV+ + P+ + ++PG I + W + +
Sbjct: 179 -GSLIVLLHLWQLLRWPLALSIVAVAFGFVYRYGPSVWNSGTPMMPGAILAAVFWAILSA 237
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
LF Y+ F Y+ +Y + +++ +++L M ++G +LN +
Sbjct: 238 LFRLYVANFGNYNKVYGAVGAVIVLMLWLSMSAAVLLIGDQLNVT 282
>gi|90426068|ref|YP_534438.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB18]
gi|90108082|gb|ABD90119.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB18]
Length = 351
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 78 ITDEILQVLAVPAKGLFTIS-----ALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYIT 131
I D++ +VLA KG + ++A A +S+NG ++A+ SLN Y E R ++
Sbjct: 128 IQDQVGRVLA---KGDVKLGTAFLFSMALALWSANGGMKAIIDSLNVVYGEQEKRGFFKL 184
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG-NLLLIIWNGRIYATMLALF 190
+S + L + ++ + VA P+ L+ V LG +I GR A + +
Sbjct: 185 NAVSLAFTLGSLAAVLAAIGLVVAAPIVLSMV-----GLGATADALIRYGRWPALAVLVL 239
Query: 191 IGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
GL ++ + P+ + I PG + +SW+ G+ ++Y+ F+ Y Y L + +
Sbjct: 240 FGLAVLYRYGPSLTAPQWRWISPGSVAAALSWLAGSAALSYYLANFANYDATYGSLGAAI 299
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
+V+++M + +LGA+LN+++
Sbjct: 300 GLMVWMWMTTIVVLLGAQLNSAI 322
>gi|125623441|ref|YP_001031924.1| putative tRNA-processing ribonuclease BN [Lactococcus lactis subsp.
cremoris MG1363]
gi|124492249|emb|CAL97179.1| putative tRNA-processing ribonuclease BN [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070189|gb|ADJ59589.1| putative tRNA-processing ribonuclease BN [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 28/261 (10%)
Query: 28 ASHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+S +SLS+ LL++FP + N+ FL H ++ + P + K I
Sbjct: 25 SSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFL--HINTTALLSFLSDQLPSDVYKGIEP 82
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI----SF 136
I +L GL ++S LA + S + AL++S+N+AY V R + ++R+I F
Sbjct: 83 VINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAYEVFNHRDFIVSRVIGLAAGF 142
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+L ++V+ +F L L V + F +L + N + A +A F+ L+ +
Sbjct: 143 AILLFLYFSIVLSTFE----QLILEQVHRIFAFDDHLYRTLHNMTLPAIAVATFLSLMML 198
Query: 197 HLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS-TMYAGLASIMTCLVF 254
+ LP K K+ +PG IF+ ++V+ V T++I + +++ L I + +VF
Sbjct: 199 YFILPNVKIRKLRYTMPGTIFS--TFVL--VFLTNWIAKYVSFALQRLDDLKLIGSLVVF 254
Query: 255 LYMLGVFF-----ILGAELNA 270
M+ F I+GA LNA
Sbjct: 255 ALMIWFIFIARVLIIGAILNA 275
>gi|162147146|ref|YP_001601607.1| ribonuclease protein [Gluconacetobacter diazotrophicus PAl 5]
gi|161785723|emb|CAP55294.1| putative ribonuclease protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 321
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 7/245 (2%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL- 93
A LS+FP I ++ G + V +DV+ P I + I ++A P L
Sbjct: 56 ATLSLFPAISTLISIYGLMFDPDTVEPQMDVLRHLLPPSAFTLIDERIHTLVAEPHSSLT 115
Query: 94 --FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
+S + +S ++ ++N AY E R + L++ G L A V+
Sbjct: 116 LNLILSTTITLWSASAATRSIISAVNIAYDTRETRGFVQFHLMALGMTLCAICGAVLTLS 175
Query: 152 VFVAIPLALAYVRKFF---PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKI 207
V VA+P+ + +V P ++ L++ G +L + ++ F P +
Sbjct: 176 VLVALPVLIDFVPARLGLAPPPWSVELLVQTGGPALMLLFVLAACSLLYRFSPNRRIVHW 235
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ ILPG + W+V ++ F++Y+ T ++Y+ Y L +++ +++ ++ +LGAE
Sbjct: 236 ICILPGSCTATLIWIVSSIGFSYYVSTIASYNATYGPLGAVVATMMWFFVTAYVILLGAE 295
Query: 268 LNASM 272
LNA +
Sbjct: 296 LNAGL 300
>gi|315639598|ref|ZP_07894738.1| YihY family protein [Enterococcus italicus DSM 15952]
gi|315484559|gb|EFU75015.1| YihY family protein [Enterococcus italicus DSM 15952]
Length = 313
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P I I I +L + L ++SAL A + +S + L+ ++NRAY V + ++ I
Sbjct: 75 PSQIYDFIGPAIKDLLTQGSGKLLSVSALGALWSASQSINGLQTAMNRAYGVEQRSNFII 134
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R++SF ++ +++V + V + L ++ F + + + T+L L
Sbjct: 135 VRIVSFFVIIFFMISIVGVFLVMGIGKVILDILQPIFQIPSEWISLFQTIKWPVTILGLL 194
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L ++ +P AK K+ S LPG IFT W+ + +F Y + F+ + Y + S +
Sbjct: 195 AMLTMIYWIVPNAKVKLRSALPGAIFTTAGWMALSQIFGLYAMYFTRRISGYQIIGSFIV 254
Query: 251 CLVFL 255
+++L
Sbjct: 255 LMIWL 259
>gi|209544202|ref|YP_002276431.1| ribonuclease BN [Gluconacetobacter diazotrophicus PAl 5]
gi|209531879|gb|ACI51816.1| ribonuclease BN [Gluconacetobacter diazotrophicus PAl 5]
Length = 321
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 7/245 (2%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL- 93
A LS+FP I ++ G + V +DV+ P I + I ++A P L
Sbjct: 56 ATLSLFPAISTLISIYGLMFDPDTVEPQMDVLRHLLPPSAFTLIDERIHTLVAEPHSSLT 115
Query: 94 --FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
+S + +S ++ ++N AY E R + L++ G L A V+
Sbjct: 116 LNLILSTTITLWSASAATRSIISAVNIAYDTRETRGFVQFHLMALGMTLCAICGAVLTLS 175
Query: 152 VFVAIPLALAYVRKFF---PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKI 207
V VA+P+ + +V P ++ L++ G +L + ++ F P +
Sbjct: 176 VLVALPVLIDFVPARLGLAPPPWSVELLVQTGGPALMLLFVLAACSLLYRFSPNRRIVHW 235
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ ILPG + W+V ++ F++Y+ T ++Y+ Y L +++ +++ ++ +LGAE
Sbjct: 236 ICILPGSCTATLIWIVSSIGFSYYVSTIASYNATYGPLGAVVATMMWFFVTAYVILLGAE 295
Query: 268 LNASM 272
LNA +
Sbjct: 296 LNAGL 300
>gi|108801303|ref|YP_641500.1| ribonuclease BN, putative [Mycobacterium sp. MCS]
gi|119870454|ref|YP_940406.1| putative ribonuclease BN [Mycobacterium sp. KMS]
gi|126437284|ref|YP_001072975.1| putative ribonuclease BN [Mycobacterium sp. JLS]
gi|108771722|gb|ABG10444.1| ribonuclease BN, putative [Mycobacterium sp. MCS]
gi|119696543|gb|ABL93616.1| putative ribonuclease BN [Mycobacterium sp. KMS]
gi|126237084|gb|ABO00485.1| putative ribonuclease BN [Mycobacterium sp. JLS]
Length = 350
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 126/269 (46%), Gaps = 7/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVF 67
F ++ F + +A+ ++ A+LS+FP ++ +L G G + ++D+V
Sbjct: 32 FYVLRKTAREFGHDQCTDLAAALTYYAVLSLFPAVLVMVSLLGVFGQGRRTTDALLDIVS 91
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMR 126
P + I Q++ P+ G + + A +S++G V A ++NR Y V E R
Sbjct: 92 DVAPASTVDTLRPTIEQLVESPSAGFALVIGILTALWSASGYVGAFGRAMNRIYEVAEGR 151
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWN-GRIYA 184
+ R + A + +++F+ V+ P+A A LG + W+ GR
Sbjct: 152 PVWKLRPLQLVLTFAALLGAALVAFMLAVSGPVAEALGNAI--GLGEAAVTAWSIGRWPV 209
Query: 185 TMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + + + ++ P + K I G ++W+V +V F Y+ FS+Y+ Y
Sbjct: 210 ILLLVVVAVAVLYYATPNVQQPKFRWISLGAGLAILTWIVASVGFGFYVANFSSYNKTYG 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASM 272
LA ++ L++L++ + + GAEL+A +
Sbjct: 270 TLAGVIIFLLWLWITNLALLFGAELDAEL 298
>gi|311746051|ref|ZP_07719836.1| putative ribonuclease BN [Algoriphagus sp. PR1]
gi|126576268|gb|EAZ80546.1| putative ribonuclease BN [Algoriphagus sp. PR1]
Length = 327
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 128/279 (45%), Gaps = 8/279 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-----TV 62
V+D+ I+ ++D A ++ S L++FP I+F N+ +L F+P +
Sbjct: 32 VYDVGRIFIQQLQKDDIVERAGSVAFSFTLALFPLILFLLNIIPYL--QDFIPIVTTQNI 89
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P + I+ +++ P + L ++ A + S+ GV ++ S N Y+
Sbjct: 90 LTFIQEMLPGELYAQAETTIMDIVSRPRQSLISLGFFFALFSSTQGVVSMMNSFNSVYQT 149
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R ++ TR I+ V + +T+ S V + + + + + + ++ +++
Sbjct: 150 KENRGFFQTRAIAASIVFILVLTIFAASAVMIIGGVIIRRLDELQLFNSDFMIFLFSTLK 209
Query: 183 YATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +L +F I F+ F PA K G + +G FT Y+ F++Y+ +
Sbjct: 210 FMVLLFMFYITTAFIFRFAPAVHDKWRFFSTGARLGGLLITLGFYGFTFYLNNFASYNKL 269
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y + +++ +++L + + ++ E+N S+ + KK
Sbjct: 270 YGSIGTLIALMLWLLITSLIVLVCFEVNVSLDLVEEDKK 308
>gi|15924873|ref|NP_372407.1| transporter [Staphylococcus aureus subsp. aureus Mu50]
gi|156980199|ref|YP_001442458.1| hypothetical protein SAHV_1868 [Staphylococcus aureus subsp. aureus
Mu3]
gi|255006671|ref|ZP_05145272.2| hypothetical protein SauraM_09385 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|14247655|dbj|BAB58045.1| similar to transporter [Staphylococcus aureus subsp. aureus Mu50]
gi|156722334|dbj|BAF78751.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 405
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%)
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I + + GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++
Sbjct: 141 ICDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VV 196
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIW--NGRIYATMLALFIGLIFV-H 197
+V + ++ V +A+P + + F F LG + W N + + + V +
Sbjct: 197 FTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIIFIVLY 256
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+
Sbjct: 257 SVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYI 316
Query: 258 LGVFFILGAELNA 270
I+GAE+NA
Sbjct: 317 TSFIIIVGAEINA 329
>gi|316935505|ref|YP_004110487.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
gi|315603219|gb|ADU45754.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
Length = 319
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 78 ITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
I +++ +VLA L F +S A + ++ GV+A+ +LN Y V E R ++ +L
Sbjct: 110 IEEQVGRVLANGQTRLGFAFLVSLSLALWSANGGVKAIIDALNAVYDVEEERGFF--KLN 167
Query: 135 SFGYVLLASVTLVIMSFV--FVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFI 191
+F +L +++ + +A P+ LA + LG+L+ ++ + GR L F
Sbjct: 168 AFSLLLTLGALGAVLAAIGLVIAAPIVLAQI-----GLGSLVAVVIDYGRWPVLALLTFA 222
Query: 192 GLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
GL ++ S +LPG + +SW+ G+ ++Y+ F+ Y+ Y L + +
Sbjct: 223 GLGLLYRTAANRPSPPWRWVLPGSVAATLSWLAGSAALSYYLANFADYNATYGSLGAAIG 282
Query: 251 CLVFLYMLGVFFILGAELNASM 272
+++++M + ++G ELNA++
Sbjct: 283 LMIWMWMTAIVVLVGGELNAAI 304
>gi|254451160|ref|ZP_05064597.1| ribonuclease BN [Octadecabacter antarcticus 238]
gi|198265566|gb|EDY89836.1| ribonuclease BN [Octadecabacter antarcticus 238]
Length = 275
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F+I ++ E++ +++ ++ L ++FP I +L G V + +D++ G
Sbjct: 7 FEITRQVLDDLREKNAGLISAGVAFYGLFAIFPGIAATISLFGIFADPIVVESQLDLMAG 66
Query: 69 AWPEVIAKPITDEILQVLAVPAK--GLFTISALAAAYFSSN-GVEALRISLN----RAYR 121
PE + K +I +L+ + G+ T+ ++ A +S+ GV AL LN R R
Sbjct: 67 LMPEGVFKLFQTQIDGLLSARSATLGVTTLLSIGLALWSARTGVAALIRGLNAIFDRPNR 126
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+R + L++ V +A V L+++ V P+ LA + F +LL ++ R
Sbjct: 127 G-SIRHVLVALLLTICLVGIAIVALLMV----VVAPIFLAVIP--FNTDQTVLLELF--R 177
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ LF+GL ++ + P + M + PG W+ + F+ Y+ FSTY+
Sbjct: 178 WSLVIAVLFVGLGLLYRYGPNRRFARMGWVTPGAFVVVAFWLAMSAAFSTYVANFSTYNE 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+Y L +++ L + Y+ ++GA LN ++ R+KP
Sbjct: 238 VYGSLGAVIALLFWFYLSAYLILVGAALNNTLD----RRKP 274
>gi|94496023|ref|ZP_01302602.1| hypothetical protein SKA58_15612 [Sphingomonas sp. SKA58]
gi|94424715|gb|EAT09737.1| hypothetical protein SKA58_15612 [Sphingomonas sp. SKA58]
Length = 321
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 116/253 (45%), Gaps = 3/253 (1%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ +L+++FPF + A +A G Q ++ P +A +
Sbjct: 49 SDGFIHAGNLAYLSLMTLFPFFIVAAAVASVFGRTQDGLQALNAFLYTVPRGVADVVRQP 108
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I VL + L + L + + +E +R L RAY ++++ RL + G L
Sbjct: 109 INDVLTARSGPLLWLGGLVGLWTVGSLIETIRDILRRAYGTKSTKAFWQYRLSAIGITLF 168
Query: 142 ASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNGRIYA-TMLALFIGLIFVHLF 199
SV V+ +F V I ++ + P + + ++ + R+ ++ + + +FV L
Sbjct: 169 -SVFAVMFAFSMQVVITGIDQFLVRLVPWADDAIALVASARLVPMAIVCVALWSLFVALT 227
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
A K + PG + T + W +L + Y Y LA +M L+F +++G
Sbjct: 228 PTAYKDRRFPKWPGAVATALWWYGTTLLLPPTLSLLGGYGRTYGSLAGVMITLIFFFLVG 287
Query: 260 VFFILGAELNASM 272
+ ++GAELNA++
Sbjct: 288 LGVVIGAELNAAL 300
>gi|169333779|ref|ZP_02860972.1| hypothetical protein ANASTE_00163 [Anaerofustis stercorihominis DSM
17244]
gi|169259628|gb|EDS73594.1| hypothetical protein ANASTE_00163 [Anaerofustis stercorihominis DSM
17244]
Length = 295
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 123/273 (45%), Gaps = 15/273 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I +++ E+ + A+ + + S P I+ L +L Q +I + +P
Sbjct: 10 IKSSLDKLSEDFIYTFAAQSAFFMMFSFVPLIMIIVLLVQYLPLTQ--EELISISIHIFP 67
Query: 72 EVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ +A ITD + + L + G + ++ L + +S G+ ++ LN Y+ + R++
Sbjct: 68 QALAGFITD-LFKGLYINYSGTVLLVTFLTLVWSASKGIYSISKGLNTIYKTKDERNYIQ 126
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S Y + +F+++ + L + L + L I + I + L F
Sbjct: 127 IRGVSLLYT-------ICFGLIFLSVIILLIFGINIAKFLQSELFFIGDLHINYSYLGGF 179
Query: 191 IGLIFVHLF----LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L+ + L LP K I+ LPG IF+ W++ + L++ YI S +Y L+
Sbjct: 180 FLLLAIFLITFCVLPKRKCHILKELPGAIFSSAGWIIFSWLYSLYITKVGANSLIYGSLS 239
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ +++LY+ LG ELN + Y +K
Sbjct: 240 AVILFMLWLYICMYIIFLGGELNVVLQTYDIKK 272
>gi|251782760|ref|YP_002997063.1| ribonuclease BN [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242391390|dbj|BAH81849.1| ribonuclease BN [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|323127604|gb|ADX24901.1| Ribonuclease BN [Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 318
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 13/243 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+ FP I+ AN+ +L + ++ ++ P+ I KP + ++ + + P+ +
Sbjct: 43 ILTAFPLIIIAANIFPYLNID--IADLLRLMKQNLPKDIFKPASSIVVNIFSKPSGSVLG 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI----SFGYVLLASVTLVIMSF 151
++ L + S + +L+ ++N+AY + R ++I L+ S + L + L+ +F
Sbjct: 101 VATLTGFWTMSRSLTSLQKAINKAYGASQHRDFFIGHLVGLLTSLIILFLLTFALIFSTF 160
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSI 210
AI + + LL+I T+L +F+GL+ ++ LP K KI I
Sbjct: 161 SKAAIQVLDNHYNLSDNITTAFLLLIQP----ITVLIIFVGLMLLYFLLPNVKIKKIRYI 216
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFILGAEL 268
LPG IFT + L +Y+V S+M ++ L+ L ILGA
Sbjct: 217 LPGTIFTSFVMTFLSNLVGNYVVHNVEKMVDIKTFGSVMIFIIMLWFIFLARILILGAIF 276
Query: 269 NAS 271
NA+
Sbjct: 277 NAT 279
>gi|227530303|ref|ZP_03960352.1| ribonuclease BN [Lactobacillus vaginalis ATCC 49540]
gi|227349780|gb|EEJ40071.1| ribonuclease BN [Lactobacillus vaginalis ATCC 49540]
Length = 317
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 121/257 (47%), Gaps = 2/257 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
++HF + A+ ++ LLS+FP ++ NL +G TV+ + P +
Sbjct: 31 VKHFTLAQLSSSAATLAYYTLLSIFPALLVIGNLLPMIGLD--ANTVLTYLQTLVPATVY 88
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I +L L + G+ T AL A + +S G+ A + S+N AY + E ++ R+IS
Sbjct: 89 SFIRPLVLDFLQRGSGGVLTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPISNRVIS 148
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
F ++++ + + ++ F++ L +++ F + + + + T +FI L
Sbjct: 149 FIWMIVVVIIIFVIVFLYGVGEQFLKWLQPFLHFNRRYIFLFSSLKWPITFAVIFIALTM 208
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ F+P AK + G I W+ + LF Y V FS Y + + + +V+L
Sbjct: 209 LYYFVPNAKVGLRFAAIGAFLVSIFWLWLSKLFGLYTVLFSHGVIGYKTIGAFIAMMVWL 268
Query: 256 YMLGVFFILGAELNASM 272
G ++GA +NA++
Sbjct: 269 DFSGYLIMMGAAINAAL 285
>gi|149276231|ref|ZP_01882375.1| hypothetical protein PBAL39_00887 [Pedobacter sp. BAL39]
gi|149232751|gb|EDM38126.1| hypothetical protein PBAL39_00887 [Pedobacter sp. BAL39]
Length = 329
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 123/250 (49%), Gaps = 8/250 (3%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
AS ++ + +L++FP I+F L F+ F +++ + P K + +++
Sbjct: 54 ASSLAYNFMLALFPAIIFLFTLIPFIPKQIGFQERLMEFIVLILPYDAYKAFETTLNEIV 113
Query: 87 AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
L + + +F++NGV L ++ N++ ++E RSW RLI+ + + ++
Sbjct: 114 NKQNGRLLSFGFFLSLFFATNGVHNLMMAFNKSSLIIETRSWVKQRLIAIVLTITIAFSV 173
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
++ + +AL Y+R GN + +I R + F+ + ++ + PA
Sbjct: 174 ILCTVAMTLGEIALTYIRTGLHMKGNFIPYLIQLTRWSLLGILYFVTISILYRYGPAHAK 233
Query: 206 KIMSILPGVIFTWISWVVGAVL---FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
K G +W++ ++ + F+ YI FS+Y+ +Y +++++ +++LY+ +
Sbjct: 234 KWRFFSAG---SWLATILAFLTVWGFSFYINNFSSYNKVYGSISALIVLMIWLYLNSLIL 290
Query: 263 ILGAELNASM 272
++G ELNAS+
Sbjct: 291 LVGFELNASV 300
>gi|170739721|ref|YP_001768376.1| ribonuclease BN [Methylobacterium sp. 4-46]
gi|168193995|gb|ACA15942.1| ribonuclease BN [Methylobacterium sp. 4-46]
Length = 386
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 127/271 (46%), Gaps = 12/271 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+Y F ++ ++A+ ++ LL++FP I +L G + + ++ G
Sbjct: 89 DILYRVYVEFQKDRVLSVAAGVTFYTLLAIFPAIAALVSLYGLFTDPATINDHLSLLQGV 148
Query: 70 WPEVIAKPITDEILQVLAVPAK--GLFTISALAAAYFSSN-GVEALRISLNRAYRVVEMR 126
P I D++ ++ A GL ++LA + +S+N GV+A+ +LN Y E R
Sbjct: 149 LPSGALDIIGDQVKRITAKGGTTLGLTFFTSLAISLWSANAGVKAIFDALNIVYEEEEKR 208
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF----FPALGNLLLIIWNGRI 182
S+ L S + L + +V V +P+ L +V F P + L+ W
Sbjct: 209 SFIRLNLQSLAFTLGGLLFVVFALTGIVVLPVILNFVGTFGISISPKAWYIALLRWP--- 265
Query: 183 YATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + L ++ + P+ K + + PG + + W++G++ F+ Y+ F +Y+
Sbjct: 266 -ILLAVLLLALAVLYRYGPSRDKPQWRWVTPGSLIAGVVWIIGSIAFSWYVAHFGSYNET 324
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L + + + ++++ +LG E+NA +
Sbjct: 325 YGSLGAAVGFMTWIWISATIVLLGGEINAEL 355
>gi|238917097|ref|YP_002930614.1| hypothetical protein EUBELI_01167 [Eubacterium eligens ATCC 27750]
gi|238872457|gb|ACR72167.1| Hypothetical protein EUBELI_01167 [Eubacterium eligens ATCC 27750]
Length = 284
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 119/259 (45%), Gaps = 19/259 (7%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP----TVIDVVFGAWPEVIAK 76
E+ AS +LS FPF + G L +F+P ++ V++G P + +
Sbjct: 17 EDRIGDYASSACYYLMLSFFPFFI------GLLSLIKFLPVSKADLLKVIYGVLPTQL-Q 69
Query: 77 PITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
PI +L + L I+A+A + + G A+ L + YR ++W R+ +
Sbjct: 70 PIVQAMLTDIYDNSTTALTLITAIAIIWAAGKGFMAIVRGLKQIYRKDNQKNWLFQRIRA 129
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI---IWNGR--IYATMLALF 190
Y L+ + ++ + V + + K+ P L N+++I I+N + ++ ++ LF
Sbjct: 130 SIYALIFMILIIASLILMVFGNNIMNFTMKYIPQLTNVVVIFRGIFNSKHFLFPSIFTLF 189
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ F + K +PG F+ + W + L++ Y+ +S MY LA+I+
Sbjct: 190 FTIAFS--LVSRRGKKFYKEIPGAFFSALGWYLFTALYSLYVGHSPNFSYMYGSLATIII 247
Query: 251 CLVFLYMLGVFFILGAELN 269
L+++Y + +GAE+N
Sbjct: 248 ALIWMYACMIIIFIGAEIN 266
>gi|258447867|ref|ZP_05696001.1| ribonuclease BN [Staphylococcus aureus A6224]
gi|257858799|gb|EEV81668.1| ribonuclease BN [Staphylococcus aureus A6224]
Length = 405
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I + + GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++
Sbjct: 141 IGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VV 196
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIW--NGRIYATMLALFIGLIFV-H 197
+V + ++ V +A+P + + F F LG + W N + + + V +
Sbjct: 197 FTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIIFIVLY 256
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+
Sbjct: 257 SVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYI 316
Query: 258 LGVFFILGAELNASMIIYYWR 278
I+GAE+NA I++ R
Sbjct: 317 TSFIIIVGAEINA---IFHQR 334
>gi|150025898|ref|YP_001296724.1| hypothetical protein FP1855 [Flavobacterium psychrophilum JIP02/86]
gi|149772439|emb|CAL43921.1| Protein of unknown function YfkH [Flavobacterium psychrophilum
JIP02/86]
Length = 315
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 124/262 (47%), Gaps = 15/262 (5%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
A+ ++ S +++FPF++F NL ++ F + V P I + I +L
Sbjct: 55 AAAVAWSFFMALFPFMLFILNLIPYIPITGFQEDFLGFVRANVPPTTFDAIDNIINDILH 114
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW--------YITRLISFGYV 139
GL + + + + +NGV A+ + +VE R++ +I+ L++F +
Sbjct: 115 NSHSGLLSTGGILSVFLMTNGVNAVMSGFETSQHIVEKRAYFRQYFVALFISMLLTF--I 172
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
LL +V+ +I+ VF+ + + + + + +I GR ++ + + + + F
Sbjct: 173 LLITVSAIIIFEVFIQRTIIQDVLSS---RISDKISLIEFGRYSFIIIMIIMSIGILFKF 229
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
K I GV+FT I ++ + F ++V FS Y+ +Y + +++ + +L++
Sbjct: 230 GIRQTRKRAFITIGVVFTTILIILSSYFFGIWVVRFSKYNELYGSIGTLLIVMFYLWLNC 289
Query: 260 VFFILGAELNASMIIYYWRKKP 281
+ +LG EL+AS IY + P
Sbjct: 290 MVLLLGFELDAS--IYKLKHHP 309
>gi|296114390|ref|ZP_06833044.1| ribonuclease BN [Gluconacetobacter hansenii ATCC 23769]
gi|295979151|gb|EFG85875.1| ribonuclease BN [Gluconacetobacter hansenii ATCC 23769]
Length = 397
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 13/251 (5%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
A LS+FP + ++ G L Q V + V+ P I D I VL +
Sbjct: 111 ATLSLFPAMSTMISIYGLLFDPQTVEPQLVVLRNLLPPAAYDLICDRI-HVLVAQSHSSL 169
Query: 95 T----ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL-LASVTLVIM 149
T +S A + +S +L +++N AY E RS+ R + G ++ L ++ I+
Sbjct: 170 TLNLIVSTTIAMWSASAATRSLLLAMNVAYNTPETRSFL--RFQAMGMIMTLCAICGGIL 227
Query: 150 SF-VFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
+ + VA+P+ L Y+ + P G+L L++ G +L + G ++ F P +S
Sbjct: 228 TLALMVALPILLDYLPQKLSLAPPPGSLELLVRMGGPALMLLFVLSGCSLLYRFGPNRRS 287
Query: 206 KI-MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
ILPG + + W++ + F++Y+ + Y Y L + + +++ Y+ +L
Sbjct: 288 PSWRCILPGSVAATLLWLLTSFGFSYYVSHIAGYGATYGPLGAFVATMMWFYVSAYVVLL 347
Query: 265 GAELNASMIIY 275
GAELNA + I
Sbjct: 348 GAELNAGLEIQ 358
>gi|118589631|ref|ZP_01547036.1| ribonuclease BN, putative [Stappia aggregata IAM 12614]
gi|118437717|gb|EAV44353.1| ribonuclease BN, putative [Stappia aggregata IAM 12614]
Length = 317
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 20/256 (7%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ LL++FP I L+G + V ++++ P ++ I + V
Sbjct: 37 IAAGVAFYGLLAIFPTITALTALSGLIVEPVEVSRQLELIESVLPHEASQIILAQAADVA 96
Query: 87 AVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
GL I A Y +S G+ ++ LN AY VE RS+ ++ + LL
Sbjct: 97 GSENAGLSFALIIGLGIAIYSTSRGMASIMEGLNIAYDEVEKRSFIALKVRTLAMALLLV 156
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI------FVH 197
+ V+ + +P+ +Y L L W RI ++ + +GL+ FV+
Sbjct: 157 LAFVLGLVSALLLPVIFSY----------LALPEWLERILSSARWIILGLLTVTGLSFVY 206
Query: 198 LFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
F P+ +K I PG + + W+ + F+ Y+ F++Y+ + LA ++ L++L+
Sbjct: 207 RFGPSRTDAKWKWITPGAVVACLLWLAASYGFSVYVSNFASYNKTFGSLAGVIILLMWLW 266
Query: 257 MLGVFFILGAELNASM 272
+ +LGAELN M
Sbjct: 267 ISAYIVLLGAELNGEM 282
>gi|332188562|ref|ZP_08390281.1| hypothetical protein SUS17_3692 [Sphingomonas sp. S17]
gi|332011406|gb|EGI53492.1| hypothetical protein SUS17_3692 [Sphingomonas sp. S17]
Length = 323
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 9/256 (3%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ AL+++FPF + A L G ++ P ++ +
Sbjct: 49 NDGFIHAGNLAYLALMTLFPFFITTAALLSLFGQSNETQHAVESFLHVLPPDVSDLLRKP 108
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I VLA L + L + +E +R +RAY V +++ +RL S V++
Sbjct: 109 IADVLAARTGSLLWLGGLVGLWTVGGFIETIRDIFHRAYGVKATAAFWKSRLSST-LVIV 167
Query: 142 ASVTLVIMSFVFVAI-PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
ASV + ++SF+ + A ++ + P + + W G A+ G +++ LF
Sbjct: 168 ASVVIALLSFLVAGVLTAAEQFIYRLVPFAQD--VAGWVGLSRFIPGAVMFGALYM-LFY 224
Query: 201 PAAKSKIMSIL----PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
SK PG +FT WV L + Y Y LA ++ L+F Y
Sbjct: 225 SVTPSKYRESDCPKWPGALFTAAWWVSMTALLPVVLSQLGGYDLTYGSLAGVVVMLLFFY 284
Query: 257 MLGVFFILGAELNASM 272
++G+ + GA LNA++
Sbjct: 285 LIGLGLVFGAHLNAAL 300
>gi|170741936|ref|YP_001770591.1| ribonuclease BN [Methylobacterium sp. 4-46]
gi|168196210|gb|ACA18157.1| ribonuclease BN [Methylobacterium sp. 4-46]
Length = 348
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 9/252 (3%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
A A ++ ALL+VFP + +L G + + + ++ G P+ + + E+ +V
Sbjct: 69 ATAGGVAFFALLAVFPGLALIVSLYGLVADPGAIYKHLSLLTGLLPQAVLDLLAAELSRV 128
Query: 86 LAVPAKGLFTISALA--AAYFSSN-GVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
L S ++ A++S+N GV AL +LN Y+ E R +F + L
Sbjct: 129 AGKSTGALGAASGVSLLVAFWSANSGVSALFDALNVIYKEREKRPLLHFYATTFLFTLTG 188
Query: 143 SVTLVIMSFVFVAIPLALAYVR-KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
+ ++ + + VA+P+ L V + + + L L+ W A ++ + +GL ++ + P
Sbjct: 189 VLFALVATGMVVALPVVLNQVGFQSYASDAALRLLRWP----ALLVLVSLGLAAIYRYGP 244
Query: 202 AA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ ++K + G + WV + LF+ Y+ F +Y+ MY L + + + +++ V
Sbjct: 245 SRHEAKWRWVTWGSGIAALLWVCASALFSWYVARFDSYNRMYGSLGAGVGFMTWIWFSIV 304
Query: 261 FFILGAELNASM 272
+LGAELNA M
Sbjct: 305 IVLLGAELNAEM 316
>gi|302670427|ref|YP_003830387.1| YihY family protein [Butyrivibrio proteoclasticus B316]
gi|302394900|gb|ADL33805.1| YihY family protein [Butyrivibrio proteoclasticus B316]
Length = 265
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
+F+ISA+A+ + + G+ AL LN Y V E R+++ RLI+ Y + V ++IM
Sbjct: 48 AVFSISAVASIWTGALGMLALIRGLNIIYDVDERRNYFYLRLIAAFYTIAMIVIVLIMLV 107
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
+ V + +P + + N + + ++ F+P+A+ K + L
Sbjct: 108 IMVFGDFVKQLIMNAYPHVWTAISFFVNFKFIMVIGIATFAFAMIYTFIPSARMKFIYQL 167
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
PG +F+ I W V + LF+ Y+ TYS +Y LA+ + + +LY F++GA +N
Sbjct: 168 PGALFSAIVWYVFSWLFSLYVSLPDTYS-IYGSLATPVIMMFWLYFCIYIFLIGAFIN 224
>gi|226945350|ref|YP_002800423.1| Ribonuclease BN protein [Azotobacter vinelandii DJ]
gi|226720277|gb|ACO79448.1| Ribonuclease BN protein [Azotobacter vinelandii DJ]
Length = 289
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GLF++ +AA + +S GV + ++N+AY V E R + +S Y + ++ L+ +
Sbjct: 94 GLFSLGIVAALWTASAGVRSTMQAMNKAYDVAESRPAWKRIPLSVLYTVGIALMLLSAAG 153
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
+ + P + ++ + L L++ +W R +L L + + ++ P + + I
Sbjct: 154 LMLIGPEVMTWLAGWV-GLEQLIVTLWTWLRWPVAILLLILVVAVIYYVAPDVEQRFRFI 212
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
PG + + W+ ++ F Y+ F Y Y + +I+ L++ ++ + GAELNA
Sbjct: 213 TPGSVLAVLVWIATSLGFGFYVGNFGNYDATYGSVGAIIVMLLYFFISAAVLLFGAELNA 272
>gi|253314945|ref|ZP_04838158.1| hypothetical protein SauraC_01970 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
Length = 291
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 8/193 (4%)
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I + + GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++
Sbjct: 17 IGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VV 72
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIW--NGRIYATMLALFIGLIFV-H 197
+V + ++ V +A+P + + F F LG + W N + + + V +
Sbjct: 73 FTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIIFIVLY 132
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+
Sbjct: 133 SVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYI 192
Query: 258 LGVFFILGAELNA 270
I+GAE+NA
Sbjct: 193 TSFIIIVGAEINA 205
>gi|57652102|ref|YP_186766.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus COL]
gi|57286288|gb|AAW38382.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus COL]
Length = 405
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--NGRIYATMLALFIGLIFV-HLFLPAAKSKI 207
V +A+P + + F F LG + W N + + + V + P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIIFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|15927457|ref|NP_374990.1| hypothetical protein SA1699 [Staphylococcus aureus subsp. aureus
N315]
gi|87160245|ref|YP_494516.1| hypothetical protein SAUSA300_1864 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195779|ref|YP_500588.1| hypothetical protein SAOUHSC_02097 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268355|ref|YP_001247298.1| ribonuclease BN [Staphylococcus aureus subsp. aureus JH9]
gi|150394417|ref|YP_001317092.1| ribonuclease BN [Staphylococcus aureus subsp. aureus JH1]
gi|151222033|ref|YP_001332855.1| ribonuclease BN [Staphylococcus aureus subsp. aureus str. Newman]
gi|161510102|ref|YP_001575761.1| ribonuclease BN [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141456|ref|ZP_03565949.1| hypothetical protein SauraJ_07428 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253729641|ref|ZP_04863806.1| ribonuclease BN [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|257793763|ref|ZP_05642742.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258408905|ref|ZP_05681187.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258420991|ref|ZP_05683922.1| ribonuclease BN [Staphylococcus aureus A9719]
gi|258430037|ref|ZP_05688407.1| ribonuclease BN [Staphylococcus aureus A9299]
gi|258443445|ref|ZP_05691787.1| ribonuclease BN [Staphylococcus aureus A8115]
gi|258445303|ref|ZP_05693494.1| ribonuclease BN [Staphylococcus aureus A6300]
gi|258453300|ref|ZP_05701285.1| ribonuclease BN [Staphylococcus aureus A5937]
gi|269203535|ref|YP_003282804.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus
ED98]
gi|282894548|ref|ZP_06302776.1| hypothetical protein SGAG_01896 [Staphylococcus aureus A8117]
gi|282923219|ref|ZP_06330900.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282928055|ref|ZP_06335662.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|294849428|ref|ZP_06790170.1| hypothetical protein SKAG_01510 [Staphylococcus aureus A9754]
gi|295407261|ref|ZP_06817060.1| hypothetical protein SMAG_02434 [Staphylococcus aureus A8819]
gi|296275884|ref|ZP_06858391.1| hypothetical protein SauraMR_06032 [Staphylococcus aureus subsp.
aureus MR1]
gi|297246212|ref|ZP_06930063.1| hypothetical protein SLAG_02294 [Staphylococcus aureus A8796]
gi|304379067|ref|ZP_07361814.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|13701676|dbj|BAB42969.1| SA1699 [Staphylococcus aureus subsp. aureus N315]
gi|87126219|gb|ABD20733.1| putative membrane protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203337|gb|ABD31147.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741424|gb|ABQ49722.1| putative ribonuclease BN [Staphylococcus aureus subsp. aureus JH9]
gi|149946869|gb|ABR52805.1| putative ribonuclease BN [Staphylococcus aureus subsp. aureus JH1]
gi|150374833|dbj|BAF68093.1| ribonuclease BN [Staphylococcus aureus subsp. aureus str. Newman]
gi|160368911|gb|ABX29882.1| possible ribonuclease BN [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253726637|gb|EES95366.1| ribonuclease BN [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|257787735|gb|EEV26075.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257840352|gb|EEV64814.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257842939|gb|EEV67357.1| ribonuclease BN [Staphylococcus aureus A9719]
gi|257849631|gb|EEV73599.1| ribonuclease BN [Staphylococcus aureus A9299]
gi|257851330|gb|EEV75270.1| ribonuclease BN [Staphylococcus aureus A8115]
gi|257855821|gb|EEV78745.1| ribonuclease BN [Staphylococcus aureus A6300]
gi|257864508|gb|EEV87251.1| ribonuclease BN [Staphylococcus aureus A5937]
gi|262075825|gb|ACY11798.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus
ED98]
gi|269941354|emb|CBI49751.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282590119|gb|EFB95200.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282593130|gb|EFB98129.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282763035|gb|EFC03167.1| hypothetical protein SGAG_01896 [Staphylococcus aureus A8117]
gi|285817563|gb|ADC38050.1| Ribonuclease BN [Staphylococcus aureus 04-02981]
gi|294823565|gb|EFG39992.1| hypothetical protein SKAG_01510 [Staphylococcus aureus A9754]
gi|294967836|gb|EFG43866.1| hypothetical protein SMAG_02434 [Staphylococcus aureus A8819]
gi|297176919|gb|EFH36176.1| hypothetical protein SLAG_02294 [Staphylococcus aureus A8796]
gi|302751755|gb|ADL65932.1| putative membrane protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304342302|gb|EFM08194.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312830255|emb|CBX35097.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315129310|gb|EFT85304.1| hypothetical protein CGSSa03_08610 [Staphylococcus aureus subsp.
aureus CGS03]
gi|315196045|gb|EFU26405.1| hypothetical protein CGSSa01_12032 [Staphylococcus aureus subsp.
aureus CGS01]
gi|320139739|gb|EFW31608.1| YihY family protein [Staphylococcus aureus subsp. aureus MRSA131]
gi|320142345|gb|EFW34159.1| YihY family protein [Staphylococcus aureus subsp. aureus MRSA177]
gi|329314559|gb|AEB88972.1| Ribonuclease BN [Staphylococcus aureus subsp. aureus T0131]
gi|329724799|gb|EGG61303.1| YihY family protein [Staphylococcus aureus subsp. aureus 21172]
gi|329728613|gb|EGG65043.1| YihY family protein [Staphylococcus aureus subsp. aureus 21189]
Length = 405
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--NGRIYATMLALFIGLIFV-HLFLPAAKSKI 207
V +A+P + + F F LG + W N + + + V + P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIIFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|119715572|ref|YP_922537.1| putative ribonuclease BN [Nocardioides sp. JS614]
gi|119536233|gb|ABL80850.1| putative ribonuclease BN [Nocardioides sp. JS614]
Length = 377
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 129/262 (49%), Gaps = 7/262 (2%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWPEVI 74
+ F ++ +A+ ++ A+L+VFP + +L G +G V T++ +V +
Sbjct: 61 VREFSDDQCTDLAAALTYYAVLAVFPAAIALTSLLGLVGQGTSSVETLLGIVDDLGGASV 120
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS-WYITR 132
K + D ++++ A GL + LA A +S++G V A ++NR Y + E R W +
Sbjct: 121 VKSVHDPLIEISRSQAAGLAFVLGLAGALWSASGYVGAFGRAMNRIYEIREGRPVWKLRP 180
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFI 191
L+ ++L ++ ++ + V P+A + +G+ LL +WN + LA+ +
Sbjct: 181 LMLLLTLVLVTLAAAVLLALVVTGPVADSVGSAL--GVGSTLLGVWNIAKWPVIALAVVV 238
Query: 192 GLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ P + + + G + ++W + ++ F Y+ FS+Y Y L ++
Sbjct: 239 MVALLYYATPNVRQPRFRWVSVGAVLAIVTWALVSLAFGFYVANFSSYDKTYGALGGVIA 298
Query: 251 CLVFLYMLGVFFILGAELNASM 272
L+++++ + + GAEL+A +
Sbjct: 299 FLLWVWLTNLALLFGAELDAEL 320
>gi|258451051|ref|ZP_05699087.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257861293|gb|EEV84105.1| conserved hypothetical protein [Staphylococcus aureus A5948]
Length = 405
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--NGRIYATMLALFIGLIFV-HLFLPAAKSKI 207
V +A+P + + F F LG + W N + + + V + P K+K+
Sbjct: 207 VALALPTLGSIISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIIFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|254465241|ref|ZP_05078652.1| ribonuclease BN [Rhodobacterales bacterium Y4I]
gi|206686149|gb|EDZ46631.1| ribonuclease BN [Rhodobacterales bacterium Y4I]
Length = 315
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 14/253 (5%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ L+++FP I + G + + I + G P+ + + I + QV
Sbjct: 37 IAAGVAFYGLMALFPAITALLAIGGLMVEPAQIVDQISQLEGVVPDEVMEIIIGQATQV- 95
Query: 87 AVPAKGLFTISALA----AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A +G ++A+A A Y +S G+ +L +N AY E R +++ ++ L
Sbjct: 96 AGSREGGLGLAAVAGILIALYSASKGMNSLIEGMNVAYDEEEKRGFFMKTFVTLVLTLFL 155
Query: 143 SVTLVIMSFVFVAIP--LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L++ +A+P +AL ALG LL W + TM GL ++ +
Sbjct: 156 IAGLLMGLLAALAVPSVIALVDAGPVIEALGTLL--AWGVLLVMTM----AGLAVLYRYG 209
Query: 201 PA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
P+ K +++ PG + W+ G+ F Y+ F +Y+ + LA ++ L++L++
Sbjct: 210 PSRDKPELLWTSPGAAAACVLWLAGSAGFAFYVGNFGSYNESFGALAGVVVLLMWLWISA 269
Query: 260 VFFILGAELNASM 272
+LGAE+NA +
Sbjct: 270 FIVLLGAEINAEV 282
>gi|315660133|ref|ZP_07912990.1| YihY family protein [Staphylococcus lugdunensis M23590]
gi|315494814|gb|EFU83152.1| YihY family protein [Staphylococcus lugdunensis M23590]
Length = 409
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 127/256 (49%), Gaps = 14/256 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAWPEVIAKPIT 79
++D +A+ ++ +L++FP ++F L Q P V D+V P A ++
Sbjct: 80 KDDASGLAAQMTYHFVLALFPMLIFLLTLLPLF---QIDPQQVKDMVSQNAPAETASVVS 136
Query: 80 DEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+I + A G + ++ + + +SNG+ A+ S N AY V + R+ + +L+S +
Sbjct: 137 -KIFNDITKNASGSILSVGLILTIWSASNGMTAIMNSFNVAYDVEDGRNPIVLKLLSVVF 195
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRK-FFPALGNLLLIIWNG---RIYATMLALFIGLI 194
++ + L V + +P +++ F A+G + W R+ + + + I
Sbjct: 196 TVVMGLVLA----VALTLPTFGTFIKDHLFGAIGLDKQVAWIFDLIRVILPFIIILLLFI 251
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ P K+KI S+ PG +FT I W++G+ F Y+ F YS Y LA I+ L++
Sbjct: 252 TLYSVAPNVKTKIKSVFPGALFTSIIWLLGSFGFGWYLSNFGNYSKTYGSLAGIIILLLW 311
Query: 255 LYMLGVFFILGAELNA 270
LY+ I+GAE+NA
Sbjct: 312 LYITCFIIIIGAEINA 327
>gi|170745562|ref|YP_001767019.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170659163|gb|ACB28217.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 351
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 129/273 (47%), Gaps = 20/273 (7%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+++ + F + A A ++ ALL+ FP + ++ + + ++ G
Sbjct: 57 DVLFRVVYSFPRDRVLATAGGVAFFALLATFPALATIVSVYSLFADPHAISQHVSLLAGV 116
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + ++D++++V L T +S L A + +++GV AL +LN YR E R
Sbjct: 117 LPSGVLDLLSDQLIRVAQQSTGALSTASLVSVLIAFWSANSGVSALFDALNVIYREREKR 176
Query: 127 S----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN--LLLIIWNG 180
S + T L + +L A L S V V +P+AL + AL + L L+ W G
Sbjct: 177 SLMRFYATTFLFTLSGILFA---LTATSLVVV-LPIALNQL--GLGALTDALLRLVRWPG 230
Query: 181 RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ + +GL + + P + K + G +SWV +V F+ Y+ +F +Y+
Sbjct: 231 ----LLILVSLGLAVTYRYGPGRRDAKWRWVSWGGAAAAVSWVCASVSFSWYVASFDSYN 286
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y L + + + +++ V +LGA+LNA +
Sbjct: 287 RIYGSLGAGIGFMTWIWFSVVIVLLGAKLNAEI 319
>gi|88812085|ref|ZP_01127337.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
gi|88790589|gb|EAR21704.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
Length = 331
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ ALLS+FP +V +L G + V G PE A+ + + LQ +
Sbjct: 50 IAAGVAFYALLSIFPALVAIVSLYGLVANPADVQQQFTHYGGILPEE-AQLLISQQLQRI 108
Query: 87 AVPAKGLFTISALAAAYFS----SNGVEALRISLNRAYRVVEMRSW----YITRLISFGY 138
A + ++ F+ + G +A ++LN Y E R + I +I+FG
Sbjct: 109 TASATSAMSAGVISGVLFAVWSATRGTKAFMLALNIVYNEKEKRGFLQFNKIALMITFGM 168
Query: 139 VLLAS------VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
++L VTL I+ + +P AL+ V FFP L + + ++
Sbjct: 169 IMLVVLALGLIVTLPIL-LSILNLPGALSTVLSFFPWL-----------LLSGCFVFWLA 216
Query: 193 LIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++F + P+ + + G I + WV+ ++LF+ Y+ F Y+ Y + +I+
Sbjct: 217 MLF--RYGPSRSEPQWNWVSVGSIAATVLWVITSMLFSFYVGNFGKYANTYGSVGAIIIL 274
Query: 252 LVFLYMLGVFFILGAELNASM 272
L++ Y+ + GAELNA M
Sbjct: 275 LLWFYLTAFVILFGAELNAQM 295
>gi|289550401|ref|YP_003471305.1| Ribonuclease BN [Staphylococcus lugdunensis HKU09-01]
gi|289179933|gb|ADC87178.1| Ribonuclease BN [Staphylococcus lugdunensis HKU09-01]
Length = 409
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 127/256 (49%), Gaps = 14/256 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAWPEVIAKPIT 79
++D +A+ ++ +L++FP ++F L Q P V D+V P A ++
Sbjct: 80 KDDASGLAAQMTYHFVLALFPMLIFLLTLLPLF---QIDPQQVKDMVSQNAPAETASVVS 136
Query: 80 DEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+I + A G + ++ + + +SNG+ A+ S N AY V + R+ + +L+S +
Sbjct: 137 -KIFNDITKNASGSILSVGLILTIWSASNGMTAIMNSFNVAYDVEDGRNPIVLKLLSVVF 195
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRK-FFPALGNLLLIIWNG---RIYATMLALFIGLI 194
++ + L V + +P +++ F A+G + W R+ + + + I
Sbjct: 196 TVVMGLVLA----VALTLPTFGTFIKDHLFGAIGLDKQVAWIFDLIRVILPFIIILLLFI 251
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ P K+KI S+ PG +FT I W++G+ F Y+ F YS Y LA I+ L++
Sbjct: 252 TLYSVAPNVKTKIKSVFPGALFTSIIWLLGSFGFGWYLSNFGNYSKTYGSLAGIIILLLW 311
Query: 255 LYMLGVFFILGAELNA 270
LY+ I+GAE+NA
Sbjct: 312 LYITCFIIIIGAEINA 327
>gi|259503840|ref|ZP_05746742.1| ribonuclease BN [Lactobacillus antri DSM 16041]
gi|259168219|gb|EEW52714.1| ribonuclease BN [Lactobacillus antri DSM 16041]
Length = 332
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 123/258 (47%), Gaps = 4/258 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ HF + A+ ++ LLS+FP ++ NL +G TV+ + A P +
Sbjct: 52 MRHFTMAQISSSAAMLAYYTLLSIFPAVLVIGNLLPMVGLD--ANTVLSYLQTAVPSSVY 109
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I I L + GL T AL A + +S G+ A + S+N Y V ++ I R++S
Sbjct: 110 VFIKPLIYDFLRRGSGGLLTTGALIALWSTSQGIAAFQRSVNLTYDVARNQNPVINRVVS 169
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA-LFIGLI 194
F ++++ + + ++ ++ L ++ F + ++N + LA LFI L
Sbjct: 170 FIWMIVVIILIFVIVLLYGFGEQVLNSIQPFL-QFNRRYISLFNSLRWPVALAVLFIALT 228
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F+P AK ++ G + + W+ + LF++Y V F Y + + + +++
Sbjct: 229 LLYYFVPNAKVRLRYAATGALLAALLWMGLSRLFSYYTVFFRHSVVSYKTIGAFIAMMIW 288
Query: 255 LYMLGVFFILGAELNASM 272
L + G +LGA LNA++
Sbjct: 289 LDLSGYVIMLGAVLNATL 306
>gi|163746838|ref|ZP_02154195.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
gi|161379952|gb|EDQ04364.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
Length = 315
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 10/251 (3%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ ALL++FP + LAG + V ++ + PE A I D+ + V
Sbjct: 37 VAAGVAFYALLAIFPAVTALMALAGLVMEPAQVTEQLEAITRLIPEEAATIILDQAIAVT 96
Query: 87 AVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI-SFGYVLLA 142
GL F I A Y +S GV +L LN AY E R ++T+LI + G L+
Sbjct: 97 GSEETGLGWAFLIGVGLALYSASKGVGSLMEGLNVAYDEDETRG-FVTKLIWTLGLTLML 155
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
L++ +A+P + ++ P LL G + L ++ + PA
Sbjct: 156 VGVLLLGLGATLAVPAVVNFLA--LPDWFETLLTY--GSWVLLAALTVLALAVLYRYGPA 211
Query: 203 AKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ L PG + + W+V +V F+ Y+ F +Y+ + +A + L++L++
Sbjct: 212 RDNAEWKWLTPGSVIACVLWIVASVGFSIYVSNFGSYNESFGSMAGAIILLMWLWISAFI 271
Query: 262 FILGAELNASM 272
+LGAE N+ M
Sbjct: 272 VLLGAEFNSEM 282
>gi|315193410|gb|EFU23807.1| hypothetical protein CGSSa00_04751 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 380
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I + + GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++
Sbjct: 141 IGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VV 196
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVH 197
+V + ++ V +A+P + + F F LG + W N RI ++ +FI I ++
Sbjct: 197 FTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLY 256
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+
Sbjct: 257 SVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYI 316
Query: 258 LGVFFILGAELNA 270
I+GAE+NA
Sbjct: 317 TSFIIIVGAEINA 329
>gi|82751536|ref|YP_417277.1| hypothetical protein SAB1815 [Staphylococcus aureus RF122]
gi|82657067|emb|CAI81504.1| probable membrane protein [Staphylococcus aureus RF122]
Length = 405
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I + + GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++
Sbjct: 141 IGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VV 196
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVH 197
+V + ++ V +A+P + + F F LG + W N RI ++ +FI I ++
Sbjct: 197 FTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLY 256
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+
Sbjct: 257 SVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYI 316
Query: 258 LGVFFILGAELNA 270
I+GAE+NA
Sbjct: 317 TSFIIIVGAEINA 329
>gi|170780894|ref|YP_001709226.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
gi|169155462|emb|CAQ00570.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
Length = 363
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 13/270 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGA 69
++ + F + +A+ ++ A+LS+FP ++ +L G G V V+D++ G
Sbjct: 36 VLRKTMREFGTDQCTDIAASLTYYAVLSLFPALIAIISLLGVFGQGESTVSAVLDLLRGF 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P I + + PA G +S + A +S++G V A ++NR Y + E R +
Sbjct: 96 APADALALIEPILTGFVESPAAGFALVSGIVLAIWSASGYVGAFSRAMNRIYEIPEGRPF 155
Query: 129 YITRLISFGYVLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + ++ V L++ + + ++ P+ A LG + I+W+ + +L
Sbjct: 156 WKLKPTQLAVTVIGIVLLLVCALIIAISGPVTDAIGEAL--GLGQTVQIVWSIAKW-PVL 212
Query: 188 ALFIGLIFVHLF--LPAAKS---KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A I L+ L+ P AK + MS+ G + V+ +V F Y+ FS+Y+ Y
Sbjct: 213 AFAIVLLIAILYYATPNAKQPKFRWMSM--GAAIALVVLVIASVAFAFYVTEFSSYAKSY 270
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
LA ++ L++L++ + + GAE +A +
Sbjct: 271 GALAGVVVFLLWLWIANLALLFGAEFDAEL 300
>gi|253734428|ref|ZP_04868593.1| ribonuclease BN [Staphylococcus aureus subsp. aureus TCH130]
gi|253727581|gb|EES96310.1| ribonuclease BN [Staphylococcus aureus subsp. aureus TCH130]
gi|329731512|gb|EGG67875.1| YihY family protein [Staphylococcus aureus subsp. aureus 21193]
Length = 405
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVHLFLPAAKSKI 207
V +A+P + + F F LG + W N RI ++ +FI I ++ P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|322377322|ref|ZP_08051813.1| putative ribonuclease BN [Streptococcus sp. M334]
gi|321281522|gb|EFX58531.1| putative ribonuclease BN [Streptococcus sp. M334]
Length = 291
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 13/243 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
L+S+FP ++ N+ + V + VV PE I + + I +VL P+ GL +
Sbjct: 43 LISIFPLLLVVVNILPYFQIP--VSNFLKVVNEFLPETIYDVVANIITEVLTQPSTGLLS 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMR----SWYITRLISFGYVLLASVTLVIMSF 151
+ L+A + S + L+ + N+AY V + R S ++ +SFG +L ++ L + F
Sbjct: 101 FAVLSALWTFSKSMNFLQKAFNKAYGVAKNRGMISSQLMSLFVSFGLQILFALALFLSVF 160
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSI 210
+ + L +Y + P L + L + +YA + A+ L+ ++ FLP +I S+
Sbjct: 161 GRMLLNLIKSYWKSDSP-LFDYLQDLTGPLVYALIFAI---LVMLYYFLPNVTVRRIRSV 216
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFILGAEL 268
LPG F ++ V+ +F+ Y+ + + +SI+ ++ + ++ I+GA +
Sbjct: 217 LPGSAFVMLTLVLLLNIFSVYVNNYVNHIVDVRFFSSIVVVVMMFWFILIAKILIVGAVI 276
Query: 269 NAS 271
NAS
Sbjct: 277 NAS 279
>gi|302333548|gb|ADL23741.1| putative membrane protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 405
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVHLFLPAAKSKI 207
V +A+P + + F F LG + W N RI ++ +FI I ++ P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|257426015|ref|ZP_05602437.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428688|ref|ZP_05605083.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431298|ref|ZP_05607674.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 68-397]
gi|257434016|ref|ZP_05610367.1| ribonuclease BN [Staphylococcus aureus subsp. aureus E1410]
gi|257436920|ref|ZP_05612962.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282904514|ref|ZP_06312399.1| YihY family protein [Staphylococcus aureus subsp. aureus C160]
gi|282906286|ref|ZP_06314138.1| ribonuclease BN [Staphylococcus aureus subsp. aureus Btn1260]
gi|282909202|ref|ZP_06317018.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282914680|ref|ZP_06322465.1| YihY family protein [Staphylococcus aureus subsp. aureus M899]
gi|282919717|ref|ZP_06327449.1| hypothetical protein SASG_02334 [Staphylococcus aureus subsp.
aureus C427]
gi|282925121|ref|ZP_06332781.1| hypothetical protein SARG_02410 [Staphylococcus aureus subsp.
aureus C101]
gi|283958644|ref|ZP_06376090.1| YihY family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293507757|ref|ZP_06667599.1| hypothetical protein SCAG_02273 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510775|ref|ZP_06669477.1| ribonuclease BN [Staphylococcus aureus subsp. aureus M809]
gi|293539314|ref|ZP_06671993.1| YihY family protein [Staphylococcus aureus subsp. aureus M1015]
gi|297590065|ref|ZP_06948705.1| YihY family protein [Staphylococcus aureus subsp. aureus MN8]
gi|257271158|gb|EEV03315.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274332|gb|EEV05844.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 65-1322]
gi|257277947|gb|EEV08603.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 68-397]
gi|257280942|gb|EEV11086.1| ribonuclease BN [Staphylococcus aureus subsp. aureus E1410]
gi|257283709|gb|EEV13834.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282313079|gb|EFB43477.1| hypothetical protein SARG_02410 [Staphylococcus aureus subsp.
aureus C101]
gi|282316355|gb|EFB46732.1| hypothetical protein SASG_02334 [Staphylococcus aureus subsp.
aureus C427]
gi|282321394|gb|EFB51720.1| YihY family protein [Staphylococcus aureus subsp. aureus M899]
gi|282326770|gb|EFB57067.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330483|gb|EFB60000.1| ribonuclease BN [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595070|gb|EFC00037.1| YihY family protein [Staphylococcus aureus subsp. aureus C160]
gi|283471153|emb|CAQ50364.1| transporter [Staphylococcus aureus subsp. aureus ST398]
gi|283789684|gb|EFC28506.1| YihY family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919849|gb|EFD96918.1| YihY family protein [Staphylococcus aureus subsp. aureus M1015]
gi|291094820|gb|EFE25088.1| hypothetical protein SCAG_02273 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466406|gb|EFF08930.1| ribonuclease BN [Staphylococcus aureus subsp. aureus M809]
gi|297577193|gb|EFH95907.1| YihY family protein [Staphylococcus aureus subsp. aureus MN8]
gi|323439155|gb|EGA96883.1| ribonuclease BN, putative [Staphylococcus aureus O11]
gi|323441561|gb|EGA99211.1| ribonuclease BN, putative [Staphylococcus aureus O46]
Length = 405
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVHLFLPAAKSKI 207
V +A+P + + F F LG + W N RI ++ +FI I ++ P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|220911338|ref|YP_002486647.1| ribonuclease BN [Arthrobacter chlorophenolicus A6]
gi|219858216|gb|ACL38558.1| ribonuclease BN [Arthrobacter chlorophenolicus A6]
Length = 402
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 11/268 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
I + F ++ +A+ ++ A+LS+FP I+ +L G G Q ++ +V G
Sbjct: 40 IAKKTLREFSKDQCPDLAASLTYYAVLSLFPAILALVSLVGLFGDPQKTTDALLQIVSGF 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P I + + PA G + L A +S++G V A +LNR Y V E R +
Sbjct: 100 VPGETMDTIGGVVKDLANAPAAGFTLVIGLGTALWSASGYVGAFGRALNRVYEVDEGRPF 159
Query: 129 YITRLISFGYVLLASVTLVIMSFVFV-AIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
R LLA V + I++ + V + P+A A F L + L +WN + M+
Sbjct: 160 VKLRGTMLAVTLLAIVIIAILAGMLVLSGPVAEAV--GGFIGLSGVFLAVWNIAKWPVMV 217
Query: 188 ALFIGLIFVHLF-LPAAKS---KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L I +I V + P K K MS+ G+ + +++ ++ F Y+ F Y+ Y
Sbjct: 218 VLIIVIIAVLYYATPNVKQPKFKWMSMGSGIAL--VVFLLASLGFGFYVGNFGNYNKTYG 275
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
L ++ L++L++L + + GAE +A
Sbjct: 276 ALGGVIVMLLWLWILNMSLLFGAEFDAE 303
>gi|262052870|ref|ZP_06025054.1| hypothetical protein SA930_0032 [Staphylococcus aureus 930918-3]
gi|259159224|gb|EEW44284.1| hypothetical protein SA930_0032 [Staphylococcus aureus 930918-3]
Length = 405
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--NGRIYATMLALFIGLIFV-HLFLPAAKSKI 207
V +A+P + + F F LG + W N + + + V + P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIIFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|258422960|ref|ZP_05685859.1| ribonuclease BN [Staphylococcus aureus A9635]
gi|257846747|gb|EEV70762.1| ribonuclease BN [Staphylococcus aureus A9635]
Length = 405
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVHLFLPAAKSKI 207
V +A+P + + F F LG + W N RI ++ +FI I ++ P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|94990668|ref|YP_598768.1| ribonuclease BN [Streptococcus pyogenes MGAS10270]
gi|94544176|gb|ABF34224.1| Ribonuclease BN [Streptococcus pyogenes MGAS10270]
Length = 321
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 126/272 (46%), Gaps = 21/272 (7%)
Query: 13 YDAIEHFVEEDGWAMASHISLSAL-------LSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
Y+ I+ F+ ++ + LSA+ L+ FP IV AN+ +L + ++ +
Sbjct: 16 YEPIQVFMRH---LQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFRPTSAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR---KFFPALGNLLLIIWNGRI 182
R ++I L+ +L + + L +++F + + A ++ K + N+ I
Sbjct: 131 RDFFIGHLVG---LLTSLIILFLLAFALIFSTFSKAAIQVLDKHYHLSDNITTIFLLLIQ 187
Query: 183 YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T+L +F+GL+ ++ LP K KI ILPG +FT + L +Y+V
Sbjct: 188 PITVLIIFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVD 247
Query: 242 YAGLASIMTCLVFLY--MLGVFFILGAELNAS 271
S+M ++ L+ L ILGA NA+
Sbjct: 248 IKMFGSVMIFIIMLWFIFLARILILGAIFNAT 279
>gi|283771032|ref|ZP_06343923.1| ribonuclease BN [Staphylococcus aureus subsp. aureus H19]
gi|283459626|gb|EFC06717.1| ribonuclease BN [Staphylococcus aureus subsp. aureus H19]
Length = 405
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I + + GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++
Sbjct: 141 IGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VV 196
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVH 197
+V + ++ V +A+P + + F F LG + W N RI ++ +FI I ++
Sbjct: 197 FTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLY 256
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+
Sbjct: 257 SVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYI 316
Query: 258 LGVFFILGAELNA 270
I+GAE+NA
Sbjct: 317 TSFIIIVGAEINA 329
>gi|307294846|ref|ZP_07574688.1| ribonuclease BN [Sphingobium chlorophenolicum L-1]
gi|306879320|gb|EFN10538.1| ribonuclease BN [Sphingobium chlorophenolicum L-1]
Length = 322
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 5/251 (1%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ +L+++FPF + A +A G Q + P +A +
Sbjct: 50 SDGFIHAGNLAYLSLMTLFPFFIVAAAVASIFGHSQDGLAAVRAFLETVPPGVADVVRQP 109
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I+ VL L + L + + +E +R L RAY R ++ RL + G + L
Sbjct: 110 IIDVLNARTGPLLWLGGLVGLWTVGSLIETIRDILRRAYGTKSTRPFWHYRLTAIG-ITL 168
Query: 142 ASVTLVIMSFVFVAIPLAL-AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
SV V+ +F I + ++ + P + I+ ++ A M L + L ++++ L
Sbjct: 169 VSVFAVMFAFSMQVIITGIDQFLHQILPFADQAIQIVALTKL-APMAILCVALYYLYVSL 227
Query: 201 PAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+ K PG I T + W +L + Y Y LA +M L+F +++
Sbjct: 228 TPSLYKDPRFPKWPGAIATALWWYGVTLLLPVTLSLLGGYDLTYGSLAGVMITLIFFFLV 287
Query: 259 GVFFILGAELN 269
G+ ++GAELN
Sbjct: 288 GLGVVIGAELN 298
>gi|298695221|gb|ADI98443.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 405
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVHLFLPAAKSKI 207
V +A+P + + F F LG + W N RI ++ +FI I ++ P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|282917228|ref|ZP_06324983.1| hypothetical protein SATG_01802 [Staphylococcus aureus subsp.
aureus D139]
gi|282318855|gb|EFB49210.1| hypothetical protein SATG_01802 [Staphylococcus aureus subsp.
aureus D139]
Length = 405
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVHLFLPAAKSKI 207
V +A+P + + F F LG + W N RI ++ +FI I ++ P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|94971696|ref|YP_593744.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
gi|94553746|gb|ABF43670.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
Length = 296
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 22/280 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFV 59
MR++ + ++ A +H D +A+A + SA+L++FP + V + L FV
Sbjct: 1 MRDFLDHLRRALWRAFQH----DAFAVAKGAAYSAILTLFPAVLVVASTLTLSHTTAAFV 56
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-----EALRI 114
+ V PE A + + +P K L T + L +++ GV E R
Sbjct: 57 REISYAVGRILPEGTASAVQEYFEGEHPIPMKFLITTAILT--LWTATGVMISWMEGFR- 113
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGN 172
AY++ + R+++ VL+A + SF+ VA L + F LG
Sbjct: 114 ---NAYQLQKTWGLIQERMVAISLVLMAGGPMAFASFL-VAFGLQIENWMIFHAGRELGM 169
Query: 173 LLLIIWN--GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+L++W+ + AT+ ++ + + H +P + +LPG + W VLF
Sbjct: 170 YILLMWSLVRWLIATVTSIAVIALIYHNGVPRTQ-PWHRVLPGAVLATAMWFGSTVLFGW 228
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI F+ Y +Y + + + L++LY++ + ++GAE NA
Sbjct: 229 YIRNFAHYDVIYGSVGTAIALLIWLYLISMVVLVGAEFNA 268
>gi|282911508|ref|ZP_06319308.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WBG10049]
gi|282324517|gb|EFB54829.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WBG10049]
gi|312437652|gb|ADQ76723.1| YihY family protein [Staphylococcus aureus subsp. aureus TCH60]
Length = 405
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVHLFLPAAKSKI 207
V +A+P + + F F LG + W N RI ++ +FI I ++ P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|21283552|ref|NP_646640.1| hypothetical protein MW1823 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486701|ref|YP_043922.1| hypothetical protein SAS1805 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297208908|ref|ZP_06925313.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300913034|ref|ZP_07130472.1| YihY family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|21204993|dbj|BAB95688.1| MW1823 [Staphylococcus aureus subsp. aureus MW2]
gi|49245144|emb|CAG43610.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296886469|gb|EFH25397.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300885812|gb|EFK81019.1| YihY family protein [Staphylococcus aureus subsp. aureus TCH70]
Length = 403
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 149 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 204
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVHLFLPAAKSKI 207
V +A+P + + F F LG + W N RI ++ +FI I ++ P K+K+
Sbjct: 205 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKL 264
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 265 KSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 324
Query: 268 LNA 270
+NA
Sbjct: 325 INA 327
>gi|229916931|ref|YP_002885577.1| ribonuclease BN [Exiguobacterium sp. AT1b]
gi|229468360|gb|ACQ70132.1| ribonuclease BN [Exiguobacterium sp. AT1b]
Length = 281
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL ++SA+ A + +SNG L AY E R + RLI +L S+ VI+
Sbjct: 87 GLLSVSAIIAFWSASNGTARLVKLTVFAYGETEARGYIFRRLIGLLVILAGSIGAVILIV 146
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
+ + + +P + + R + + L I + P + + + L
Sbjct: 147 FHLFGQEFVELIYALYPQVEEFDRLSTVTRYTVSTIILIIAFSLFYKIAPQQRVRFIETL 206
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
PG +F ISW + + ++ Y+ FS Y + +++ ++LY+ ++GAE+NA+
Sbjct: 207 PGAVFAVISWQLLSTGYSIYVERFSILGDTYGTIGAVILLQIWLYLTAATMLIGAEINAA 266
Query: 272 MIIYYWRKKP 281
Y+ ++P
Sbjct: 267 W-PYHMTRQP 275
>gi|325262470|ref|ZP_08129207.1| ribonuclease BN [Clostridium sp. D5]
gi|324032302|gb|EGB93580.1| ribonuclease BN [Clostridium sp. D5]
Length = 282
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 10/221 (4%)
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
Q V + VF E + I D++ Q + + ++ + A + + GV ++
Sbjct: 56 TRQDVMAAVTQVFPTTVEGLISSIVDQVYQ----QSSTIIPVTIIVALWSAGKGVLSMTS 111
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNL 173
+N Y E R+++ RL + Y ++ + +V+ +S +++ +V K P L +
Sbjct: 112 GMNLIYENTETRNYFYLRLRASFYTVIFILAIVLSLSLSVFGNSISM-FVYKHAPVLTTI 170
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPA----AKSKIMSILPGVIFTWISWVVGAVLFT 229
+ + R T++ L + V+ +LP +K+ + LPG +FT W++ + +F+
Sbjct: 171 MDFLIRIRTLLTLVVLTLFWDLVYKYLPNRTNRSKTTMKQQLPGAVFTSCGWLLISFIFS 230
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y+ F+ +S+MY L +I+ +++LY+ +LG ELNA
Sbjct: 231 IYLDIFTGFSSMYGSLTTIILIMLWLYVCMYVILLGGELNA 271
>gi|86159452|ref|YP_466237.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775963|gb|ABC82800.1| ribonuclease BN, putative [Anaeromyxobacter dehalogenans 2CP-C]
Length = 338
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + K + D I Q+ A L AL A + +S AL SLN AY V E R ++
Sbjct: 73 PGEVTKIVGDRIQQLGAQQNVTLLGFGALGALWAASGATLALMRSLNTAYDVKESRPFWK 132
Query: 131 TRLISF-----------GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
R I+ + A T I + + + A+ ++R F AL
Sbjct: 133 VRAIALLMTVVAGVLALAGAVAAVATEPIANAIGGSAGAAILWLRLPFAAL--------- 183
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
M++L+ L +V LP + + I PG +F + WV+ + F Y+ F Y
Sbjct: 184 -----VMMSLWALLYYV---LPDVEQQFKFITPGSVFGVVLWVLASWGFGKYVANFGHYD 235
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y +A ++ L ++++ + ++GAE+NA
Sbjct: 236 KTYGSIAGVIVLLFWMWISSLVLLVGAEINA 266
>gi|297625291|ref|YP_003687054.1| tRNA processing ribonuclease BN [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921056|emb|CBL55594.1| TRNA processing ribonuclease BN [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 364
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 23/275 (8%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGA 69
++ I F + +A+ ++ A+LS+FP ++ +L G +G + V+ ++
Sbjct: 35 VLRKTIREFSSDQCTDIAASLTYYAVLSLFPCLIAIFSLLGVVGQGKAASDAVLGIIEQV 94
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P I I Q+ P G I+ + A +S++G V A ++NR Y + E R +
Sbjct: 95 APGDTVDTIRGPIEQIAESPGAGFALITGILLAIWSASGYVGAFSRAMNRIYEIEEGRPF 154
Query: 129 YITR-------LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + +I+ +++A++ LV+ V AI AL +G++ IW+
Sbjct: 155 WKLKPAQLLVTVITIVLLVIAAIILVVSGDVTKAIGDALG--------IGDVPQTIWS-- 204
Query: 182 IYATMLALFIGLIFVHLF---LPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
I L +FI ++ V + P AK K I G + I + F Y+ FS
Sbjct: 205 IAKWPLLIFIAVLVVAILYYATPNAKQPKFRWISMGALLAIIVLALATAAFGFYVGNFSN 264
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y Y LA ++ L++L++ + + GAE +A +
Sbjct: 265 YDRTYGSLAGVIIFLLWLWIANLALLFGAEFDAEL 299
>gi|225011726|ref|ZP_03702164.1| ribonuclease BN [Flavobacteria bacterium MS024-2A]
gi|225004229|gb|EEG42201.1| ribonuclease BN [Flavobacteria bacterium MS024-2A]
Length = 308
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 26/278 (9%)
Query: 12 IYDAIEHFV----EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA------HQFVPT 61
IYD IE +V + A IS S +++FPF++F NL F+ F T
Sbjct: 30 IYDLIEMYVIGIVKGALSYRAGSISFSFFMALFPFLLFIINLIPFVDMIPFIHIENFDQT 89
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P T + P GL + L + + S+NGV A+ S +Y
Sbjct: 90 FLNYIELFLPSETQTFFTGIFEDIRNKPRGGLLSSVFLLSIFLSANGVSAIFGSFEVSYH 149
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNG 180
V RS++ L S G SV L +S V I F L NL L+
Sbjct: 150 VKLSRSFFRQYLFSMG----ISVVLAFLSLFAVIIFFYFE-----FYILNNLESLVPSEV 200
Query: 181 RIYATMLALFIGLI------FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
R+ F GL ++ F KI PG + T + + + F YI
Sbjct: 201 RLTRISQISFFGLFAYLTVSILYYFGTIEGRKIRFFSPGALMTTLLFFLTTYGFGIYIDN 260
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
FSTY+ +Y + +++ L++++M +LG ELNA++
Sbjct: 261 FSTYNQLYGSIGALLIFLLYIWMNSNILLLGFELNATL 298
>gi|19746326|ref|NP_607462.1| hypothetical protein spyM18_1365 [Streptococcus pyogenes MGAS8232]
gi|21910564|ref|NP_664832.1| hypothetical protein SpyM3_1028 [Streptococcus pyogenes MGAS315]
gi|28895744|ref|NP_802094.1| hypothetical protein SPs0832 [Streptococcus pyogenes SSI-1]
gi|50914420|ref|YP_060392.1| ribonuclease BN [Streptococcus pyogenes MGAS10394]
gi|56808457|ref|ZP_00366201.1| COG1295: Predicted membrane protein [Streptococcus pyogenes M49
591]
gi|71903759|ref|YP_280562.1| ribonuclease BN [Streptococcus pyogenes MGAS6180]
gi|94988776|ref|YP_596877.1| ribonuclease BN [Streptococcus pyogenes MGAS9429]
gi|94992661|ref|YP_600760.1| ribonuclease BN [Streptococcus pyogenes MGAS2096]
gi|139473605|ref|YP_001128321.1| ribonuclease BN-like family protein [Streptococcus pyogenes str.
Manfredo]
gi|209559593|ref|YP_002286065.1| Ribonuclease BN [Streptococcus pyogenes NZ131]
gi|306827129|ref|ZP_07460421.1| YihY family protein [Streptococcus pyogenes ATCC 10782]
gi|19748519|gb|AAL97961.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|21904764|gb|AAM79635.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28810993|dbj|BAC63927.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|50903494|gb|AAT87209.1| Ribonuclease BN [Streptococcus pyogenes MGAS10394]
gi|71802854|gb|AAX72207.1| ribonuclease BN [Streptococcus pyogenes MGAS6180]
gi|94542284|gb|ABF32333.1| ribonuclease BN [Streptococcus pyogenes MGAS9429]
gi|94546169|gb|ABF36216.1| Ribonuclease BN [Streptococcus pyogenes MGAS2096]
gi|134271852|emb|CAM30087.1| ribonuclease BN-like family protein [Streptococcus pyogenes str.
Manfredo]
gi|209540794|gb|ACI61370.1| Ribonuclease BN [Streptococcus pyogenes NZ131]
gi|304430682|gb|EFM33699.1| YihY family protein [Streptococcus pyogenes ATCC 10782]
Length = 321
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 126/272 (46%), Gaps = 21/272 (7%)
Query: 13 YDAIEHFVEEDGWAMASHISLSAL-------LSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
Y+ I+ F+ ++ + LSA+ L+ FP IV AN+ +L + ++ +
Sbjct: 16 YEPIQVFMRH---LQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFRPASAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR---KFFPALGNLLLIIWNGRI 182
R ++I L+ +L + + L +++F + + A ++ K + N+ I
Sbjct: 131 RDFFIGHLVG---LLTSLIILFLLAFALIFSTFSKAAIQVLDKHYHLSDNITTIFLLLIQ 187
Query: 183 YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T+L +F+GL+ ++ LP K KI ILPG +FT + L +Y+V
Sbjct: 188 PITVLIIFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVD 247
Query: 242 YAGLASIMTCLVFLY--MLGVFFILGAELNAS 271
S+M ++ L+ L ILGA NA+
Sbjct: 248 IKMFGSVMIFIIMLWFIFLARILILGAIFNAT 279
>gi|94994597|ref|YP_602695.1| ribonuclease BN [Streptococcus pyogenes MGAS10750]
gi|94548105|gb|ABF38151.1| Ribonuclease BN [Streptococcus pyogenes MGAS10750]
Length = 321
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 126/272 (46%), Gaps = 21/272 (7%)
Query: 13 YDAIEHFVEEDGWAMASHISLSAL-------LSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
Y+ I+ F+ ++ + LSA+ L+ FP IV AN+ +L + ++ +
Sbjct: 16 YEPIQVFMRH---LQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFRPASAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR---KFFPALGNLLLIIWNGRI 182
R ++I L+ +L + + L +++F + + A ++ K + N+ I
Sbjct: 131 RDFFIGHLVG---LLTSLIILFLLAFALIFSTFSKAAIQVLDKHYHLSDNITTIFLLLIQ 187
Query: 183 YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T+L +F+GL+ ++ LP K KI ILPG +FT + L +Y+V
Sbjct: 188 PITVLIIFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVD 247
Query: 242 YAGLASIMTCLVFLY--MLGVFFILGAELNAS 271
S+M ++ L+ L ILGA NA+
Sbjct: 248 IKMFGSVMIFIIMLWFIFLARILILGAIFNAT 279
>gi|255531742|ref|YP_003092114.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
gi|255344726|gb|ACU04052.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
Length = 330
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 125/250 (50%), Gaps = 8/250 (3%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
AS ++ + +L++FP I+F L F+ F ++ ++ P + + +++
Sbjct: 54 ASSLAYNFMLAIFPAIIFLFTLIPFIPKRFHFQDQLMQLIMLILPADAYNAFSATLDEIV 113
Query: 87 AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
+GL + L + +F++NGV L ++ N++ ++E R+W RLI+ L ++++
Sbjct: 114 HKQNRGLLSFGFLLSLFFATNGVHNLMMAFNKSSLIIETRTWLKQRLIAIVLTLTIALSV 173
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-FIGLIFVHLFLPAAKS 205
++ AL Y+ G+ ++ + ++ + L F+ + ++ + PA
Sbjct: 174 IVCIIAMAIGEYALNYIDTGLDIKGDFIVYLIKLTRWSLLGILYFVTISILYRYGPAHAK 233
Query: 206 KIMSILPGVIFTWISWVVGAVL---FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
K G +W++ ++ + F+ YI FS+Y+ +Y + +++ +++LY+ +
Sbjct: 234 KWRFFSAG---SWLATILAFLTIWGFSFYINNFSSYNKIYGSIGTLIVIMIWLYLNSLIL 290
Query: 263 ILGAELNASM 272
++G ELNAS+
Sbjct: 291 LIGFELNASV 300
>gi|322373467|ref|ZP_08048003.1| YihY family protein [Streptococcus sp. C150]
gi|321278509|gb|EFX55578.1| YihY family protein [Streptococcus sp. C150]
Length = 319
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 15/244 (6%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP IV AN+ +L +++ + P+ P + + V + P+ L
Sbjct: 43 ILTVFPLIVIAANVFPYLNID--TTDLLNFMSEHLPKQFYAPAANVVKDVFSTPSGQLLG 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+++L + + +L+ ++N+ Y E R +I+ +I L+ L +
Sbjct: 101 VASLTGFWTMIKSLSSLQKAINKVYGASEHRDVFISHIIGGLLSLVILFLLTFALMLSTI 160
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGV 214
+ L + + +P NL +I N ++ +F+G++ ++ LP K KI I+PG
Sbjct: 161 VQSVLRVINQTYPIGSNLTQLILNSIQPLSVAVVFLGVMVLYFILPNVKIRKIRYIMPGT 220
Query: 215 IFTWISWVVG--AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF-----ILGAE 267
IFT + V+G + LF Y++ + SIM +F++ML F ILGA
Sbjct: 221 IFT--TLVIGYLSNLFGTYVIRTLSRLVDIKLFGSIM---IFVFMLWFIFLARILILGAI 275
Query: 268 LNAS 271
NA+
Sbjct: 276 FNAT 279
>gi|78223975|ref|YP_385722.1| ribonuclease BN [Geobacter metallireducens GS-15]
gi|78195230|gb|ABB32997.1| tRNA-processing RNAse BN [Geobacter metallireducens GS-15]
Length = 453
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 33/267 (12%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFG-ANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
++ F+++ AS ++ S LLS+ PF A L GF + P ++D V E++
Sbjct: 45 VKDFLDDQCLIRASALAFSTLLSIVPFFALAFAVLKGFGVQNTLEPFILDQVAAGSHEIV 104
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFS-----SNGVEALRISLNRAYRVVEMRSWY 129
D+I+ + G LAA + + N EA N + V E RS Y
Sbjct: 105 -----DKIVAYINNTKVGSLGAIGLAALFVTVVTLLGNVEEAF----NAIWGVRETRSLY 155
Query: 130 ------ITRLISFGYVLLASV--TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
++ L+S +L A+V T I S FV + Y LG+ LL ++
Sbjct: 156 RKFSDYLSVLVSGPILLFAAVSTTTTIESQAFVQWIMGYTY-------LGDALLALFRLV 208
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
Y L+++I L+F+++F+P K + S L G I W + H+ V + Y+ +
Sbjct: 209 PY---LSIWIALVFLYMFIPNTKVRFRSALVGGIIAGTIWQGAQWGYIHFQVGVAKYNAI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y LA + +V+LY V +LG E+
Sbjct: 266 YGTLAVLPVFMVWLYASWVIVLLGGEV 292
>gi|284024929|ref|ZP_06379327.1| hypothetical protein Saura13_10091 [Staphylococcus aureus subsp.
aureus 132]
Length = 405
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++ +V + ++
Sbjct: 151 GLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLS----VVFTVVMGVVFV 206
Query: 152 VFVAIPLALAYVRKF-FPALGNLLLIIW--NGRIYATMLALFIGLIFV-HLFLPAAKSKI 207
V +A+P + + F F LG + W N + + + V + P K+K+
Sbjct: 207 VALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIIFIVLYSVAPNVKTKL 266
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+ I+GAE
Sbjct: 267 KSVLPGAVFTSIIWLAGSFGFGWYISIFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAE 326
Query: 268 LNA 270
+NA
Sbjct: 327 INA 329
>gi|83953008|ref|ZP_00961730.1| hypothetical protein NAS141_11906 [Sulfitobacter sp. NAS-14.1]
gi|83841976|gb|EAP81144.1| hypothetical protein NAS141_11906 [Sulfitobacter sp. NAS-14.1]
Length = 303
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 24/283 (8%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+D + A+ E++ +A+ ++ A+LS+FP + + + V ++ + G
Sbjct: 8 WDALKAALVDISEKNVSLIAAGVAFYAMLSLFPALAALVTILSLISDPVVVIAQLEDMRG 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ + + D+++ ++ L S L A + + GV A+ I LN Y
Sbjct: 68 LLPDDVYDILNDQVVSLVTTSTGKLGWAGAASVLVAMWSARAGVGAMMIGLNSVYSERNR 127
Query: 126 ---RSWYITRLISFGYV---LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
R + +++F V L+A +T+VI V IPL V +F A +I W+
Sbjct: 128 NAARHYLRALMLTFTLVMVGLIALITVVIAPIVLSFIPLG---VFGYFVAE----IIRWS 180
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTY 238
+L L G+ ++ F P ++ + L G +F SW V ++ F++Y+ F Y
Sbjct: 181 ----IAILVLLAGVGVLYRFGPNRRAARIGWLTWGAVFAVFSWAVVSIGFSYYVANFGNY 236
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ +Y + +++ LV+L++ ++GA NA + + R +P
Sbjct: 237 NQVYGSIGAVIAMLVWLWISSFLVLMGASWNAQVEL---RTRP 276
>gi|83941959|ref|ZP_00954421.1| conserved hypothetical membrane protein [Sulfitobacter sp. EE-36]
gi|83847779|gb|EAP85654.1| conserved hypothetical membrane protein [Sulfitobacter sp. EE-36]
Length = 308
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 24/283 (8%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+D + A+ E++ +A+ ++ A+LS+FP + + + V ++ + G
Sbjct: 13 WDALKAALVDISEKNVSLIAAGVAFYAMLSLFPALAALVTILSLISDPVVVIAQLEDMRG 72
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ + + D+++ ++ L S L A + + GV A+ I LN Y
Sbjct: 73 LLPDDVYDILNDQVVSLVTTSTGKLGWAGAASVLVAMWSARAGVGAMMIGLNSVYSERNR 132
Query: 126 ---RSWYITRLISFGYV---LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
R + +++F V L+A +T+VI V IPL V +F A +I W+
Sbjct: 133 NAARHYLRALMLTFTLVMVGLIALITVVIAPIVLSFIPLG---VFGYFVAE----IIRWS 185
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTY 238
+L L G+ ++ F P ++ + L G +F SW V ++ F++Y+ F Y
Sbjct: 186 ----IAILVLLAGVGVLYRFGPNRRAARIGWLTWGAVFAVFSWAVVSIGFSYYVANFGNY 241
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ +Y + +++ LV+L++ ++GA NA + + R +P
Sbjct: 242 NQVYGSIGAVIAMLVWLWISSFLVLMGASWNAQVEL---RTRP 281
>gi|49484124|ref|YP_041348.1| hypothetical protein SAR1973 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295428464|ref|ZP_06821091.1| hypothetical protein SIAG_02233 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|49242253|emb|CAG40960.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295127446|gb|EFG57085.1| hypothetical protein SIAG_02233 [Staphylococcus aureus subsp.
aureus EMRSA16]
Length = 405
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I + + GL +I + A + +SNG+ A+ S N AY V + R+ + +L+S ++
Sbjct: 141 IGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYYVEDSRNGIVLKLLS----VV 196
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIW--N-GRIYATMLALFIGLIFVH 197
+V + ++ V +A+P + + F F LG + W N RI ++ +FI I ++
Sbjct: 197 FTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLY 256
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+ L++LY+
Sbjct: 257 SVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYI 316
Query: 258 LGVFFILGAELNA 270
I+GAE+NA
Sbjct: 317 TSFIIIVGAEINA 329
>gi|332711504|ref|ZP_08431435.1| putative membrane protein [Lyngbya majuscula 3L]
gi|332349482|gb|EGJ29091.1| putative membrane protein [Lyngbya majuscula 3L]
Length = 350
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 10/219 (4%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSW 128
P +PI + Q+ LF++S + A + SS + A +L+ + + + R +
Sbjct: 125 PAQAVQPIQEFTEQIHLSTNSSLFSLSFIIAIWVSSGALSAAMNALDHIHHIPREQQRPF 184
Query: 129 YITRLISFGYVLLASVTLVIMSF-VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +LIS G + + + LVI SF VF++ + V ++ L + + +M+
Sbjct: 185 WKAKLISLGLTIGSIILLVIASFLVFISHWVLKTVVDTSGASILLTLWSLLTWPVALSMV 244
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLA 246
A F++ + P+ ILPG + ISW V + LF HY+ FS Y+ +Y +
Sbjct: 245 A--ASFAFIYRYGPSRWQLGTPILPGAVLAAISWAVASGLFRHYVTANFSNYNKVYGTVT 302
Query: 247 SIMTCLVFLYMLGVFFILGAELN----ASMIIYYWRKKP 281
+++ ++LYM + +LG +LN +M + R +P
Sbjct: 303 AVIILQLWLYMTSLLLLLGDQLNVIVGEAMQASHRRPRP 341
>gi|116511406|ref|YP_808622.1| ribonuclease BN-like family protein [Lactococcus lactis subsp.
cremoris SK11]
gi|116107060|gb|ABJ72200.1| Ribonuclease BN-like family enzyme [Lactococcus lactis subsp.
cremoris SK11]
Length = 301
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 28/261 (10%)
Query: 28 ASHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+S +SLS+ LL++FP + N+ FL H ++ + P + + I
Sbjct: 25 SSEMSLSSIAVAYYLLLAIFPLGLIIGNILPFL--HIDTSGLLSFLSEQLPSDVYRGIEP 82
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI----SF 136
I +L GL ++S LA + S + AL++S+N+AY V R + ++R+I F
Sbjct: 83 VINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAYEVFNHRDFIVSRVIGLAAGF 142
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+L ++V+ +F L L V + F +L + N + A +A F+ L+ +
Sbjct: 143 AILLFLYFSIVLSTFG----QLILEQVHRIFAFDDHLYRTLHNMTLPAIAVATFLSLMML 198
Query: 197 HLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS-TMYAGLASIMTCLVF 254
+ LP K K+ +PG IF+ ++V+ V T++I + +++ L I + +VF
Sbjct: 199 YFILPNVKIRKLRYTMPGTIFS--TFVL--VFLTNWIAKYVSFALQRLDDLKLIGSLVVF 254
Query: 255 LYMLGVFF-----ILGAELNA 270
M+ F I+GA LNA
Sbjct: 255 ALMIWFIFIARVLIIGAILNA 275
>gi|226323653|ref|ZP_03799171.1| hypothetical protein COPCOM_01428 [Coprococcus comes ATCC 27758]
gi|225207837|gb|EEG90191.1| hypothetical protein COPCOM_01428 [Coprococcus comes ATCC 27758]
Length = 277
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 6/219 (2%)
Query: 57 QFVP----TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
Q+ P V+ V +PE + I+ + +K + I+A+ A + + GV A+
Sbjct: 47 QYTPVTKADVMTAVVNLFPETSMQDFMVGIVNEVYNQSKTVIPITAIVALWSAGKGVLAV 106
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALG 171
LN AY + E R++ R+ + Y +L + ++M+ V ++ ++ P L
Sbjct: 107 STGLNCAYELRETRNYVFLRIRASIYTILF-IAAIVMALVLSVFGNNISIFIYHKIPFLA 165
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+I R + +A+ + V+ FLP K ++ G IF + W+V + +F+ Y
Sbjct: 166 ETTDMIMRLRTVISFVAMTGISLLVYHFLPNRKLPFRDLILGSIFCSLGWLVISFVFSMY 225
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ F +S +Y + +I+ +++LY +LG +N
Sbjct: 226 LTIFKGFSGLYGSMTAIILVMLWLYFCMYVMLLGGLINC 264
>gi|77164583|ref|YP_343108.1| ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|254434849|ref|ZP_05048357.1| YihY family protein [Nitrosococcus oceani AFC27]
gi|76882897|gb|ABA57578.1| Ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|207091182|gb|EDZ68453.1| YihY family protein [Nitrosococcus oceani AFC27]
Length = 328
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 127/267 (47%), Gaps = 8/267 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI Y + +++ +A+ ++ ALL++FP +V ++ G + V D + G
Sbjct: 28 DIAYRIKDSLDDDNISIVAAGVAFYALLAIFPALVAMVSIYGIIADPADVQRQFDALSGI 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +++++ ++ + + L + + A + ++ G +A I+LN Y E R
Sbjct: 88 LPTEAQVLLSEQLRRITSQASTALSVGVGVGVILALWSATRGTKAFIIALNIVYGEKEKR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ I+ L A V ++ + V +P+ L+Y+ P + +L + + A
Sbjct: 148 GFLKLNAIALMLTLGAIVLAILALGMIVVLPILLSYLD--LPEIFQVLASLLPWLLLA-- 203
Query: 187 LALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+GL ++ + P+ ++++ + G + + W+VG+ LF+ Y+ F+ Y+ Y +
Sbjct: 204 FTFILGLAVLYRYGPSRSEARWRWVSWGAVAATVLWIVGSALFSFYVANFAQYNKTYGSV 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
+++ L++ ++ +L AE NA M
Sbjct: 264 GALIILLMWFFVTAYIILLAAEFNAEM 290
>gi|148271712|ref|YP_001221273.1| putative tRNA processing ribonuclease BN [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829642|emb|CAN00558.1| putative tRNA processing ribonuclease BN [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 363
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 25/276 (9%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGA 69
++ + F + +A+ ++ A+LS+FP ++ +L G G Q V V+D++ G
Sbjct: 36 VLRKTVREFGSDQCTDIAASLTYYAVLSLFPALIAIISLLGVFGQGQQTVTAVLDLLRGF 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P I + + PA G +S + A +S++G V A ++NR Y + E R +
Sbjct: 96 APADALALIEPILTGFVESPAAGFALVSGIVLAIWSASGYVGAFTRAMNRIYEIPEGRPF 155
Query: 129 YITRLISFGYVLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + L+ V L++ + + ++ P+ A LG + I+W+ + +L
Sbjct: 156 LKLKPMQLAVTLIGIVILLVCALIIAISGPVTDAIGEAL--GLGPTVQIVWSIAKW-PVL 212
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL-----------FTHYIVTFS 236
A I L+ L+ +K F W+S VGA + F Y+ FS
Sbjct: 213 AFAIVLLIAILYYATPNAKQPK------FRWMS--VGAAIALVVLVVASVGFAFYVTEFS 264
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y+ Y LA ++ L++L++ + + GAE +A +
Sbjct: 265 SYAKSYGALAGVVVFLLWLWIANLALLFGAEFDAEL 300
>gi|15675286|ref|NP_269460.1| hypothetical protein SPy_1353 [Streptococcus pyogenes M1 GAS]
gi|71910915|ref|YP_282465.1| ribonuclease BN [Streptococcus pyogenes MGAS5005]
gi|13622462|gb|AAK34181.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71853697|gb|AAZ51720.1| ribonuclease BN [Streptococcus pyogenes MGAS5005]
Length = 321
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 127/272 (46%), Gaps = 21/272 (7%)
Query: 13 YDAIEHFVEEDGWAMASHISLSAL-------LSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
Y+ I+ F+ ++ + LSA+ L+ FP IV AN+ +L + ++ +
Sbjct: 16 YEPIQVFMRH---LQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFRPASAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFV-AI--PLALAYVRKFFPALGNLLLIIWNGRI 182
R ++I L+ +L + + L +++F + +I A+ + K + N+ I
Sbjct: 131 RDFFIGHLVG---LLTSLIILFLLAFALIFSIFSKAAIQVLDKHYHLSDNITTIFLLLIQ 187
Query: 183 YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T+L +F+GL+ ++ LP K KI ILPG +FT + L +Y+V
Sbjct: 188 PITVLIIFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVD 247
Query: 242 YAGLASIMTCLVFLY--MLGVFFILGAELNAS 271
S+M ++ L+ L ILGA NA+
Sbjct: 248 IKMFGSVMIFIIMLWFIFLARILILGAIFNAT 279
>gi|126729991|ref|ZP_01745803.1| ribonuclease BN, putative [Sagittula stellata E-37]
gi|126709371|gb|EBA08425.1| ribonuclease BN, putative [Sagittula stellata E-37]
Length = 322
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 30/261 (11%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ I+ ALLS+FP I LAG F+ D + P + + ++ +V+
Sbjct: 37 LAAGIAFYALLSLFPGITAAVALAGLFTDPSFMVETSDALADVVPTAAEEIMLGQLREVV 96
Query: 87 AVPAK--GLFTISALAAAYFS-SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ G + ++ A FS S + I LN Y E R + RL++ L
Sbjct: 97 TTSSSSLGWAVLLSIGLALFSASRATQNFIIGLNVIYGEKERRGFIKLRLLNIALTLGLI 156
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI-----------G 192
+ LVI + A+P A +++ + R + T L L++ G
Sbjct: 157 IGLVIAIAIVAAMPAAASFI---------------SNRTWVTDLVLYLRWPVLFIVGAFG 201
Query: 193 LIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ FV P+ + ++ + PG + WV+G++ F+ Y+ +F TY+ + L ++
Sbjct: 202 IAFVFRVGPSRRYARWRWLTPGALLACALWVIGSIGFSRYVASFGTYNETFGALGGVIVL 261
Query: 252 LVFLYMLGVFFILGAELNASM 272
L +L++ +LGA ++A +
Sbjct: 262 LTWLWLTAYIVLLGAAVDAEL 282
>gi|255038759|ref|YP_003089380.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
gi|254951515|gb|ACT96215.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
Length = 310
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ I+ +++ +H +++ A+A ++L+A FP I+F L ++ ++
Sbjct: 31 YDIILNLVASNRKHEIDQRASAVAYSLTLAA----FPGIIFLFTLIPYIPIENLDQQILV 86
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ P+ + IL +++ P G+ ++ + A S+NG+ +L S + Y E
Sbjct: 87 LLRNNMPQGTFEAADQTILDIVSRPRSGVLSLGFIFAMIASTNGMMSLMRSFDMVYDDKE 146
Query: 125 MRSWYITR------LISFGYVLLASVTLVIMSFVFVAIPLALAYVR-KFFPALGNLLLII 177
R + R + VL SV L+I+ ++I +R + AL N+L
Sbjct: 147 TRGFLAIRGIATLLTLLLIAVLCLSVVLLIVGDAVMSIVGDWHIIRDNWLIALLNIL--- 203
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
R + +L + + ++ F P+ + + G + + + F+ Y+ FS+
Sbjct: 204 ---RYLISFGSLMLTISIIYRFAPSHGRQFTFVNAGSVIASVLILAATYGFSFYLSRFSS 260
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
Y+ +Y + +++ ++++Y+L ILG E+N
Sbjct: 261 YNKLYGSIGTMIALMIWIYLLAFVIILGFEIN 292
>gi|327474796|gb|EGF20201.1| ribonuclease BN [Streptococcus sanguinis SK408]
gi|332362522|gb|EGJ40322.1| ribonuclease BN [Streptococcus sanguinis SK1056]
Length = 302
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 11/243 (4%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
L+SVFP ++ N+ + H V + + PE + + + +VL P+ GL +
Sbjct: 43 LISVFPLLLIVVNILPYF--HIPVADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLS 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
S L+A + S + L+I+ N+AY V + R R++S L + + F+ +
Sbjct: 101 FSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLISHRVMSLFVSLGLQILFALALFLTMF 160
Query: 156 IPLALAYVRKFFPALGNL---LLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSIL 211
++L ++R ++ L L IYA + A+ + L F FLP K +K +L
Sbjct: 161 GHMSLDFLRTYWKLDNQLYQHLQHFTEPLIYALLFAVLVMLYF---FLPNVKINKKRYVL 217
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI-MTCLVFLY-MLGVFFILGAELN 269
PG F +++ + +F+ Y+ + + +SI M ++F + M+ I+GA LN
Sbjct: 218 PGSAFVFLTILALLNIFSVYMDNYLNHLVDVRFFSSIIMVVMMFWFIMIAKILIVGAVLN 277
Query: 270 ASM 272
AS+
Sbjct: 278 ASI 280
>gi|271961924|ref|YP_003336120.1| ribonuclease BN [Streptosporangium roseum DSM 43021]
gi|270505099|gb|ACZ83377.1| ribonuclease BN [Streptosporangium roseum DSM 43021]
Length = 334
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 125/272 (45%), Gaps = 14/272 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+D++ ++ F E++ A+ ++ A+LS+FP ++ ++ G G +++D G
Sbjct: 41 WDVLKRTVKEFQEDNLTDWAAALTYYAVLSIFPALLAVISVLGLFG-QSATQSLVDN-LG 98
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYRVVEM 125
A A+ D +LQ L + + + A + +S+ V A + N Y + E
Sbjct: 99 ALAPGPARQTIDTVLQALQSSQRAAGIAAIIGIAVALWSASSYVGAFMRAANVMYEMPEG 158
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAI--PLALAYVRKFFPALGNLLLIIWNGRIY 183
R + T + G + +V +++M+ VA+ LA +G L +W G +
Sbjct: 159 RPVWKTLPLRLG---ITAVLVILMAVGSVAVVFTGGLAEQAGKVLGVGETGLAVW-GVVK 214
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L + + L+ L+ A + I PG + + W+ + F Y+ F +YS
Sbjct: 215 WPILVIIVALVLALLYWAAPNVQHPGFRWITPGSMIAVVLWIAASAAFGFYVANFGSYSK 274
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
YA LA ++ L++L++ + +LG E +A +
Sbjct: 275 TYAALAGVVVFLIWLWITNIAVLLGVEFDAEL 306
>gi|295136139|ref|YP_003586815.1| ribonuclease BN [Zunongwangia profunda SM-A87]
gi|294984154|gb|ADF54619.1| ribonuclease BN [Zunongwangia profunda SM-A87]
Length = 297
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP----EVIAKPITDEI 82
+++ ++ A L+VFP I+ +L G Q + I+ + P EV+ + + D
Sbjct: 41 VSAGVAFYAFLAVFPAIMALISLYGLATDPQEIQRQINELSAMMPRQAFEVLQQRV-DVF 99
Query: 83 LQVLAVPAKGLFTISALAAAYFSSN-GVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
LQ G T+ + + +S+N G L ++ AY +E + + L++ + +
Sbjct: 100 LQTHG-DQLGWGTVFGIIFSIWSANKGTNGLLTGVDIAYDTIENHNIFKQYLMASVFTIG 158
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ L++ + V P A V K PA L+ + A ++++F L V+ F
Sbjct: 159 GLIMLILSMILIVGFP---ALVHKIGLPAKLEDLISWSRWLLLAFLVSIF--LCLVYKFA 213
Query: 201 PA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
PA K ++PG +F+ I W+ + F+ Y+ F Y +Y +++++ L++LY+
Sbjct: 214 PARPKPTTRWVIPGALFSTIVWLAASYGFSFYVSNFGNYGEVYGSISAVVVLLLWLYITC 273
Query: 260 VFFILGAELNASMIIY 275
+LGAE+N ++ Y
Sbjct: 274 FIILLGAEINTEIVDY 289
>gi|210620881|ref|ZP_03292298.1| hypothetical protein CLOHIR_00241 [Clostridium hiranonis DSM 13275]
gi|210155093|gb|EEA86099.1| hypothetical protein CLOHIR_00241 [Clostridium hiranonis DSM 13275]
Length = 284
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 17/253 (6%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
+ A+ ++ +S+FPF++F + ++ Q + +D++ P V A D +++
Sbjct: 26 SKAAEVAFFLTMSIFPFLMFTVSTVAYVPVLQ-ITKYVDMIEQVVP-VKAIGFVDLVIKS 83
Query: 86 LAVPAKGLFTISALAAAYFS-SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV 144
+ I + ++ S V+AL +N A+ E RS+ +IS +
Sbjct: 84 AVEKRNTHYMIVSFCLTMWTFSRAVKALIKGMNAAFYSPETRSFLKVMMISMIF------ 137
Query: 145 TLVIMSFVFVAIPLALAYVRKF----FPALG--NLLLIIWNGRIYAT-MLALFIGLIFVH 197
TL+++ +F ++ L L Y K F LG + +WN YA +A I ++
Sbjct: 138 TLMLLVLIFTSMIL-LVYGEKIGVVIFSYLGFDKVFFNLWNITRYAVGTVATIIVFTLLY 196
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+ P + PG IF W + + L+++Y FS YS +Y I+ L +LY
Sbjct: 197 KYTPNINLSAKRVAPGAIFATFGWFLMSYLYSYYTNNFSNYSAIYGSFREIIVLLTWLYF 256
Query: 258 LGVFFILGAELNA 270
++G E+NA
Sbjct: 257 SSWVIVIGYEINA 269
>gi|325696058|gb|EGD37949.1| ribonuclease BN [Streptococcus sanguinis SK160]
Length = 313
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 13/244 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
L+SVFP ++ N+ + H V + + PE + + + +VL P+ GL +
Sbjct: 48 LISVFPLLLIVVNILPYF--HIPVADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLS 105
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL----ISFGYVLLASVTLVIMSF 151
S L+A + S + L+I+ N+AY V + R R+ +S G +L ++TL + F
Sbjct: 106 FSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLISHRVMSLFVSLGLQILFALTLFLTMF 165
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSI 210
+++ Y K L L IYA + A+ L+ ++ FLP K K +
Sbjct: 166 GHMSLDFLRTY-WKLDNQLYQHLQHFTEPLIYALLFAV---LVMLYYFLPNVKIKKKRYV 221
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI-MTCLVFLY-MLGVFFILGAEL 268
LPG F ++ + +F+ Y+ + + +SI M ++F + M+ I+GA L
Sbjct: 222 LPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSIIMVVMMFWFIMIAKILIVGAVL 281
Query: 269 NASM 272
NAS+
Sbjct: 282 NASI 285
>gi|325694920|gb|EGD36825.1| ribonuclease BN [Streptococcus sanguinis SK150]
Length = 308
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 11/243 (4%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
L+SVFP ++ N+ + H V + + PE + + + +VL P+ GL +
Sbjct: 43 LISVFPLLLIVVNILPYF--HIPVADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLS 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
S L+A + S + L+I+ N+AY V + R R++S L + F+ +
Sbjct: 101 FSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLISHRVMSLFVSLGLQILFAFALFLTMF 160
Query: 156 IPLALAYVRKFFPALGNLLLIIWN---GRIYATMLALFIGLIFVHLFLPAAK-SKIMSIL 211
++L ++R ++ L + N IYA + A+ L+ ++ FLP K +K +L
Sbjct: 161 GHMSLDFLRTYWKLDSQLYQHLQNFTEPLIYALLFAV---LVMLYYFLPNVKINKKRYVL 217
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI-MTCLVFLY-MLGVFFILGAELN 269
PG F ++ + +F+ Y+ + + +SI M ++F + M+ I+GA LN
Sbjct: 218 PGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSIIMVVMMFWFIMIAKILIVGAVLN 277
Query: 270 ASM 272
AS+
Sbjct: 278 ASI 280
>gi|55823460|ref|YP_141901.1| tRNA-processing ribonuclease BN [Streptococcus thermophilus
CNRZ1066]
gi|55739445|gb|AAV63086.1| tRNA-processing ribonuclease BN,putative [Streptococcus
thermophilus CNRZ1066]
Length = 319
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 15/244 (6%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP IV AN+ +L ++ + P+ P + I + + P+ L
Sbjct: 43 ILTVFPLIVIAANVFPYLNID--TTDLLKFMNEHLPKHFYAPAANVIQDIFSTPSGRLLG 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+S+L + + +L+ ++++ Y E R +I+ +I L+ L + +
Sbjct: 101 VSSLTGFWTMIKSLSSLQKAIDKVYGASEHRDVFISHIIGGLLSLVILFLLTFALMLSII 160
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGV 214
I L + + +P NL +I N ++ +F+G++ ++ LP K KI I+PG
Sbjct: 161 IQSVLRVINQTYPIGSNLTQLILNSIQPLSVAVVFLGMMVLYFILPNVKIRKIRYIMPGT 220
Query: 215 IFTWISWVVG--AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF-----ILGAE 267
IFT + V+G + LF Y++ + SIM +F++ML F I GA
Sbjct: 221 IFT--TLVIGYLSNLFGTYVIHTLSRLVDIKLFGSIM---IFIFMLWFIFLARILIFGAI 275
Query: 268 LNAS 271
NA+
Sbjct: 276 FNAT 279
>gi|269929219|ref|YP_003321540.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
gi|269788576|gb|ACZ40718.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
Length = 369
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 16/275 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW--- 70
+ + F ++D MA+ + + S+ P ++F A L+G + + T +DV FG
Sbjct: 14 EVVREFSDDDVTGMAAQAAYQIIFSLPPLLIFFAALSGLVARY----TGVDV-FGQLLSL 68
Query: 71 -PEVIAKPITDEILQVLA----VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
E + + D + +L + GL + L A + +S + + NRAY V +
Sbjct: 69 AEEGLPASVFDTVEIILGGIQEQSSAGLLSFGFLLAIWSASGALNTMISLFNRAYDVDDT 128
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYA 184
R + RL++ G + +V LVI +FV + F LG ++WN R A
Sbjct: 129 RGFIKKRLLAIGLTIGLAV-LVIGAFVLFVFGQRIGLWIAEFAGLGEAFTLVWNIVRWPA 187
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + L ++ PA + I PG +F + W++ F+ Y+ FS + Y
Sbjct: 188 IVIFMMLALAILYWAGPAIEQTFRWISPGAVFATLLWLLATFGFSLYL-RFSNPGSAYGI 246
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++ L FLY+ + +LG E+NA + Y K
Sbjct: 247 LGGLVVLLFFLYLSSIVLLLGCEVNAVIDKRYDPK 281
>gi|317124596|ref|YP_004098708.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
gi|315588684|gb|ADU47981.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
Length = 355
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 127/270 (47%), Gaps = 21/270 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVV----FGA 69
A F ++ +A+ ++ +LS+FP ++ +L G G V +++D++ G
Sbjct: 40 AAHEFGHDECTDLAAGLTYYGVLSIFPGLLALVSLLGVFGRGRSTVESLLDILEAVGQGD 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
+ + PITD ++ A GL + L A +S++G V A ++NR Y V E R +
Sbjct: 100 SADTLRGPITD----MVNSGAAGLTLVVGLVGAVWSASGYVGAFGRAMNRIYGVDEGRPF 155
Query: 129 YITRLISFG----YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ +V++A+ L+++ V LA LG + W+ +
Sbjct: 156 IRLRPLNLALTVAFVIMAA--LILLGLVLTG---DLARAVGDTIGLGGAAVTTWSIAKWP 210
Query: 185 TMLALFIGLI-FVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L L I ++ ++ P K L G + ++ +V +V F Y+ FS Y Y
Sbjct: 211 VILILVIAMVALLYWATPNVKQPRFRWLSVGAVIAILAAIVASVGFGFYVSGFSNYDKTY 270
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
LA ++ L++++++ + + GAE++A M
Sbjct: 271 GSLAGVIVFLLWMWLMNLALLFGAEVDAEM 300
>gi|228477289|ref|ZP_04061927.1| ribonuclease BN [Streptococcus salivarius SK126]
gi|228251308|gb|EEK10479.1| ribonuclease BN [Streptococcus salivarius SK126]
Length = 313
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 118/247 (47%), Gaps = 21/247 (8%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP IV AN+ +L ++ + P+ P + + + + P+ L
Sbjct: 37 ILTVFPLIVIAANVFPYLNID--TTDLLKFMNEHLPKQFYAPAANVVQDIFSTPSGQLLG 94
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV- 154
+++L + + +L+ ++N+ Y E R +I+ +I G++ L V L +++F +
Sbjct: 95 VASLTGFWTMIKSLSSLQKAINKVYGASEHRDVFISHIIG-GFMSL--VILFLLTFALML 151
Query: 155 --AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSIL 211
I L + + +P + +I N ++ +F+G++ ++ LP K KI ++
Sbjct: 152 STIIQSVLRVINQTYPIGSKMTQLILNSIQPLSIAVVFLGMMVLYFVLPNVKIRKIRYVM 211
Query: 212 PGVIFTWISWVVG--AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF-----IL 264
PG IFT + V+G + LF Y++ + SIM +F++ML F IL
Sbjct: 212 PGTIFT--TLVIGYLSNLFGTYVIRTLSRLVDIKLFGSIM---IFVFMLWFIFLARILIL 266
Query: 265 GAELNAS 271
GA NA+
Sbjct: 267 GAVFNAT 273
>gi|299137399|ref|ZP_07030581.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
gi|298600804|gb|EFI56960.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
Length = 343
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
Q A G T+ +AA + +S G A++ +N Y+V E R ++ R G +L +
Sbjct: 116 QTAAAATGGKITLGLVAALWSASVGFAAIQDGMNTVYKVRESRPYWKAR----GAAILVT 171
Query: 144 VTLVIMSFVFVAIPLA------LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF-- 195
+ L +M + + L L YVR + AL I+ ++ + GL+
Sbjct: 172 MLLSVMVTANLGVLLGGDLIAKLVYVRIWHHALATTTAIV----VHLVQWVVASGLLLLQ 227
Query: 196 ---VHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ F P K+K I PG WV+ ++ Y+ F +S Y L +++
Sbjct: 228 FSTIYYFAPDLKAKRWHWITPGAAIGISGWVLASLGLRVYLHFFDNFSLTYGSLGAVIIL 287
Query: 252 LVFLYMLGVFFILGAELNASM 272
L + Y+ G+ +LGAE+N+ +
Sbjct: 288 LTWFYITGLMLLLGAEINSEI 308
>gi|329116369|ref|ZP_08245086.1| YihY family protein [Streptococcus parauberis NCFD 2020]
gi|326906774|gb|EGE53688.1| YihY family protein [Streptococcus parauberis NCFD 2020]
Length = 310
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 19/246 (7%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP IV AN+ +L + ++ ++ + P I + ++ + + PA G+
Sbjct: 43 ILTVFPLIVIAANIFPYLNID--IRDLLQLMKQSLPNDIYQSARSVVINIFSKPAGGVLG 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV-TLVIMSFVFV 154
++ + S + +L+ ++N+AY R + + L+ LLAS+ L +++FV +
Sbjct: 101 VATFTGLWTMSKSLTSLQRAINKAYDASPHRDFLLGHLVG----LLASIFILFLLAFVLI 156
Query: 155 AIPLALAYVR------KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKI 207
+ A ++ L +L L + T++ + +GL+ ++ LP + KI
Sbjct: 157 FSTFSKAAIQVMDNHYHLSDGLTSLFLTLIQP---VTIIIILLGLMALYFLLPNIRIKKI 213
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFILG 265
I+PG +FT + L HY+V S+M ++ L+ L ILG
Sbjct: 214 RYIMPGALFTGFVMTFLSNLIGHYVVVNVEKMVDIKTFGSVMIFIIMLWFIFLARILILG 273
Query: 266 AELNAS 271
A NA+
Sbjct: 274 AIFNAT 279
>gi|306833155|ref|ZP_07466285.1| possible ribonuclease BN [Streptococcus bovis ATCC 700338]
gi|304424729|gb|EFM27865.1| possible ribonuclease BN [Streptococcus bovis ATCC 700338]
Length = 309
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 24/261 (9%)
Query: 27 MASHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
++ I LSA LL+ FP IV AN+ +L + ++ + P + ++
Sbjct: 27 QSAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--ISVLLSFMEKNLPTNLYPSVS 84
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + P+ + ++ L A + S + +L+ ++N+AY V + R + I RLI V
Sbjct: 85 AITTDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVSQHRDFVIGRLIG---V 141
Query: 140 LLASVTLVIMSFVFVAIPL---ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
L + + L +++FV + AL + + + ++ N T+L + GL+ +
Sbjct: 142 LASLLILFLLTFVLIFSTFSKAALQIISTHYDLSDTVATVVLNLSQPVTVLTIVFGLMLL 201
Query: 197 HLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ LP K + ILPG IFT V LF++YI+ T+ M + + + ++F+
Sbjct: 202 YFILPNVKIRRFRYILPGTIFTSFVIVFLNNLFSNYIL--RTFERM-VDIKTFGSVVIFV 258
Query: 256 YMLGVFF-----ILGAELNAS 271
ML F ILGA NA+
Sbjct: 259 LMLWFIFLAHILILGAIFNAT 279
>gi|227893136|ref|ZP_04010941.1| possible ribonuclease BN [Lactobacillus ultunensis DSM 16047]
gi|227865002|gb|EEJ72423.1| possible ribonuclease BN [Lactobacillus ultunensis DSM 16047]
Length = 307
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 107/217 (49%), Gaps = 9/217 (4%)
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++VVF P+ +++ I + +L + G + + A + SN V A+R+ NR Y V
Sbjct: 67 LNVVF---PDQVSEFIMPIVNSLLKTTSTGYMSFGIILAVWSFSNLVNAIRLGENRLYGV 123
Query: 123 --VEMR----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
VE++ ++ TR+I+ + L + +S V V L ++ F N +
Sbjct: 124 HQVELKLSIVNFIWTRMITIAFTALMIIIFTAVSIVLVFGQQLLNVLQPIFHLPVNEINK 183
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I++ R +L + + + +++ LP K K I PGVI T I W+ + LF+ Y+ F
Sbjct: 184 IFSYRYPVVILVMVLAVSYLNYVLPNIKLKKRVIWPGVITTVIGWLGLSFLFSFYLHNFP 243
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + + + +++L + V F++G +NA++I
Sbjct: 244 ITWENYGIVGTFIIFMLWLNIAAVLFLVGVAVNAAII 280
>gi|184200660|ref|YP_001854867.1| hypothetical protein KRH_10140 [Kocuria rhizophila DC2201]
gi|183580890|dbj|BAG29361.1| hypothetical membrane protein [Kocuria rhizophila DC2201]
Length = 400
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 122/262 (46%), Gaps = 5/262 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEV 73
A+ F ++ +A+ ++ A+LSVFP ++ +L G G + ++D + P
Sbjct: 82 ALSEFTKDGCTDLAASLTYFAVLSVFPALLALVSLLGVFGQGEATTKAILDFLNQYAPSA 141
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITR 132
+ + ++D I Q+ GL + + A ++++G A +LNR Y V E R ++ +
Sbjct: 142 LVELLSDPISQLTTQSGAGLALVVGIVGALWTASGYTGAFSRALNRIYEVSEGRPFWKLK 201
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFI 191
+ V L V +V V V + LA LG+ + +WN +I +L L +
Sbjct: 202 PVML-LVTLIVVLIVAAVMVMVLLSGDLAQTLGDAVGLGSTAVTVWNWVKIPVVLLLLVL 260
Query: 192 GLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + P + K + PG + + +V + F Y+ F+ Y+ Y + S++
Sbjct: 261 LIAILFYATPNVQQPKFRWMSPGAAISLVFMIVAGLAFAFYVANFAKYNATYGVIGSVII 320
Query: 251 CLVFLYMLGVFFILGAELNASM 272
L+ L+++ + GAE++A +
Sbjct: 321 LLLGLWIMNNALLFGAEVDAEL 342
>gi|150376889|ref|YP_001313485.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
gi|150031436|gb|ABR63552.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
Length = 328
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + + E+ +A+ ++ LLSVFP + ++ G + + +
Sbjct: 36 DVFWRVVAQVSEDRISLVAAGVTFYVLLSVFPALASLVSIYGLVSDPGTIAEQASYLAAI 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +TD++ + + L F L A + + NGV AL ++N AY E R
Sbjct: 96 LPAQSLQLMTDQLKALASQNTSSLSLGFIGGLLFALWSARNGVSALFEAMNIAYDETEKR 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI---- 182
+ L+S G+ L L++ + + AI + PAL + L + G I
Sbjct: 156 GFIRLALLSIGFTL---AGLILTAVLIGAIAV--------LPALLSFLDLKLQGIISFAR 204
Query: 183 YATMLALFIGLI-FVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ML L +I ++ + P+ + +K+ + G + + W+V ++ F++YI F+ Y+
Sbjct: 205 WPVMLLLIAAVITLIYRYGPSREPAKLRWLTWGAALSTVCWLVASLAFSYYIDNFANYNA 264
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L +++ ++++++ + I+GAELNA +
Sbjct: 265 TYGALGALIGFMLWIWISTMIVIVGAELNAEL 296
>gi|332359440|gb|EGJ37260.1| putative ribonuclease BN [Streptococcus sanguinis SK355]
Length = 307
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 122/260 (46%), Gaps = 11/260 (4%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ E D + ++ L+SVFP ++ N+ + H + + + PE + +
Sbjct: 26 YKESDSELSSVAVAYYWLISVFPLLLIVVNILPYF--HIPIADFLTAIKDMLPETLYDVV 83
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ +VL P+ GL + S L+A + S + L+I+ N+AY V + R R++S
Sbjct: 84 AKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLISHRVMSLFV 143
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN---GRIYATMLALFIGLIF 195
L + + F+ + ++L ++R ++ L + N IYA + A+ L+
Sbjct: 144 SLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQNFTEPLIYALLFAV---LVM 200
Query: 196 VHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI-MTCLV 253
+ FLP K +K +LPG F ++ + +F+ Y+ + + +SI M ++
Sbjct: 201 FYYFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSIIMVVMM 260
Query: 254 FLY-MLGVFFILGAELNASM 272
F + M+ I+GA LNAS+
Sbjct: 261 FWFIMIAKILIVGAVLNASI 280
>gi|223933150|ref|ZP_03625142.1| ribonuclease BN [Streptococcus suis 89/1591]
gi|223898211|gb|EEF64580.1| ribonuclease BN [Streptococcus suis 89/1591]
Length = 309
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 23/279 (8%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPT 61
+ FC+ F Y + D + ++ L+S+FP ++ LA L + F V
Sbjct: 11 KTFCLTFFSFYRS------ADSDVTSVAVAYYLLISIFPILL---TLANLLPYYPFDVDM 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ VV P+ + ++ I VL P+ IS L + S + L+ + N+AY
Sbjct: 62 ILSVVAEFVPDKLYPSVSSFITSVLTKPSSSWLGISILTTLWTLSRSMTILQKAFNKAYG 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL-AYVRKFFPALGNLLLIIWNG 180
+ E R + I LI ++ + +V++S + A+ +Y+ K P L + +
Sbjct: 122 INEHRDFIIGHLIGI-FLGIGLQVIVLLSITLLTFGQAVFSYINKLVPIEDAWLKGLLSQ 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ALF L+ ++ FLP + K+ + PG +F ++ LF+ Y+ ++
Sbjct: 181 TQLVGLMALFAALVMLYFFLPNVRIKKVRYVFPGTLFVLLTMTSIGKLFSIYVDNYANKL 240
Query: 240 TMYAGLASIMTCLVFL-YMLGVFF-----ILGAELNASM 272
+ I+T +VFL +ML F I+GA +NA++
Sbjct: 241 LDF----RIVTAVVFLVFMLWFIFMAQVLIVGAMINATV 275
>gi|315223035|ref|ZP_07864914.1| YihY family protein [Streptococcus anginosus F0211]
gi|315187985|gb|EFU21721.1| YihY family protein [Streptococcus anginosus F0211]
Length = 316
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 55/301 (18%)
Query: 6 CIVFDIIYDAIEHFVEEDGWA----------MASHISLSA-------LLSVFPFIVFGAN 48
CI ++ D ++ FV + G AS I L++ L+S+FP ++ N
Sbjct: 8 CI---LVGDEMKKFVSKIGQNPFLQSFFKFYQASEIDLTSIAVAYYLLISIFPLLLIVVN 64
Query: 49 LAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS 106
+ + + +F+ + DV+ + EV+AK + +L P+ GL + S L+A + S
Sbjct: 65 ILPYFQIPIAEFLEAMEDVLPESLYEVVAKVTRN----LLTQPSSGLLSFSILSALWAFS 120
Query: 107 NGVEALRISLNRAYRVVEMRSWYITRL----ISFGYVLLASVTLVIMSFVFVAIPLALAY 162
+ L+ + N+AY V + R RL IS G L +++L++ F +++ L ++
Sbjct: 121 QSMSFLQKAFNKAYGVAKDRGLISHRLFSLVISLGLQFLFALSLLLTMFGRMSLRLLHSF 180
Query: 163 VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV---------HLFLPAAK-SKIMSILP 212
++G++YA++ + I+ + FLP K KI +LP
Sbjct: 181 WE-------------FDGQLYASLQRMTQPTIYTLLFLSLLMLYYFLPNVKIRKIRYVLP 227
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFILGAELNA 270
G IF + V LF+ Y+ T+ + +SI +V ++ + I+GA LNA
Sbjct: 228 GTIFVVFTIGVLLNLFSVYLDTYVNHLMDVRFFSSIFVVVVMIWFTFIAQIMIIGAILNA 287
Query: 271 S 271
S
Sbjct: 288 S 288
>gi|288904981|ref|YP_003430203.1| Ribonuclease BN protein [Streptococcus gallolyticus UCN34]
gi|306831051|ref|ZP_07464212.1| possible ribonuclease BN [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325977948|ref|YP_004287664.1| putative ribonuclease BN protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288731707|emb|CBI13268.1| putative Ribonuclease BN protein [Streptococcus gallolyticus UCN34]
gi|304426617|gb|EFM29728.1| possible ribonuclease BN [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325177876|emb|CBZ47920.1| putative ribonuclease BN protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 310
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 24/260 (9%)
Query: 28 ASHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++ I LSA LL+ FP IV AN+ +L + ++ + P + ++
Sbjct: 28 SAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--ISVLLSFMEKNLPTNLYPSVSA 85
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ + P+ + ++ L A + S + +L+ ++N+AY V + R + I RLI VL
Sbjct: 86 ITTDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVSQHRDFVIGRLIG---VL 142
Query: 141 LASVTLVIMSFVFVAIPL---ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ + L +++FV + AL + + + ++ N T+L + GL+ ++
Sbjct: 143 ASLLILFLLTFVLIFSTFSKAALQIISAHYDLSDTVATVVLNLSQPVTVLTIVFGLMLLY 202
Query: 198 LFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
LP K + ILPG IFT V LF++YI+ T+ M + + + ++F+
Sbjct: 203 FILPNVKIRRFRYILPGTIFTSFVIVFLNNLFSNYIL--RTFERM-VDIKTFGSVVIFVL 259
Query: 257 MLGVFF-----ILGAELNAS 271
ML F ILGA NA+
Sbjct: 260 MLWFIFLAHILILGAIFNAT 279
>gi|27382587|ref|NP_774116.1| hypothetical protein blr7476 [Bradyrhizobium japonicum USDA 110]
gi|27355759|dbj|BAC52741.1| blr7476 [Bradyrhizobium japonicum USDA 110]
Length = 376
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + + ++ A A + LL++FP + + G + + +
Sbjct: 81 DIFWRTYQRIDDDRLLATAGGVVFFGLLAIFPAVTALVSSYGLFADPSTISANLQTLATM 140
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTIS-----ALAAAYFSSN-GVEALRISLNRAYRVV 123
PE + + D++ +V++ KG T+ L A +S+N GV+++ +LN AY
Sbjct: 141 LPEGSFQIVEDQVARVVS---KGNTTLGVTFLLGLLLAIWSANAGVKSIFDALNVAYEER 197
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RS+ +S + V L++M VA PLAL ++ P LI+ R
Sbjct: 198 EKRSFIRLNSVSLAFTAGGIVALLLMVGAVVAFPLALDHL-GLAP---ESKLIVALARWP 253
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L L + L ++ F P+ + L G + + W+ G+ L + Y+ F+ Y+ Y
Sbjct: 254 LLFLILLVALAILYRFAPSRDAPRWQWLSLGAVAAALLWIAGSALLSWYLSEFANYNATY 313
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
L + + +++++M + + GAELN+ +
Sbjct: 314 GSLGAAIGLMMWMWMSAIVIMFGAELNSEI 343
>gi|332361950|gb|EGJ39752.1| ribonuclease BN [Streptococcus sanguinis SK49]
Length = 307
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 23/252 (9%)
Query: 36 LLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+SVFP ++ N+ + F+ + D++ PE + + + +VL P+ GL
Sbjct: 43 LISVFPLLLIVVNILPYFNIPIADFLTAIKDML----PETLYDVVAKVMREVLTQPSTGL 98
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL----ISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R R+ +S G +L + TL +
Sbjct: 99 LSFSVLSALWTFSKSMNFLQFAFNKAYGVAKSRGLISHRVMSLVVSIGLQILFAFTLFLT 158
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWN---GRIYATMLALFIGLIFVHLFLPAAK-S 205
F ++L ++R ++ L + N IYA + A+ L+ + FLP K +
Sbjct: 159 MFG----HMSLDFLRTYWKLDNQLYQHLQNFTEPLIYALLFAV---LVMFYYFLPNVKIN 211
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI-MTCLVFLY-MLGVFFI 263
K +LPG +F ++ + +F+ Y+ + + +SI M ++F + M+ I
Sbjct: 212 KKRYVLPGSVFVILTILALMNIFSVYMDNYLNHLVDVRFFSSIIMVVMMFWFIMIAKILI 271
Query: 264 LGAELNASMIIY 275
+GA LNAS+ Y
Sbjct: 272 VGAVLNASIQSY 283
>gi|330833243|ref|YP_004402068.1| ribonuclease BN [Streptococcus suis ST3]
gi|329307466|gb|AEB81882.1| ribonuclease BN [Streptococcus suis ST3]
Length = 309
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 27/251 (10%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
L+S+FP ++ ANL L + F V ++ VV P+ + ++ I VL P+
Sbjct: 38 LISIFPILLTLANL---LPYYPFDVDMILSVVAEFVPDKLYPSVSSFITSVLTKPSSSWL 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS------FGYVLLASVTLVI 148
IS L + S + L+ + N+AY + E R + I LI ++L S+TL+
Sbjct: 95 GISILTTLWTLSRSMTILQKAFNKAYGINEHRDFIIGHLIGIFLGIGLQVIILLSITLLT 154
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKI 207
+Y+ K P L + + ++ALF L+ ++ FLP + K+
Sbjct: 155 FG------QAVFSYINKLVPIEDAWLKGLLSQTQLVGLMALFAALVMLYFFLPNVRIKKV 208
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL-YMLGVFF---- 262
+ PG +F ++ LF+ Y+ ++ + I+T +VFL +ML F
Sbjct: 209 RYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLDF----RIVTAVVFLVFMLWFIFMAQV 264
Query: 263 -ILGAELNASM 272
I+GA +NA++
Sbjct: 265 LIIGAMINATV 275
>gi|253752308|ref|YP_003025449.1| ribonuclease BN-like family protein [Streptococcus suis SC84]
gi|253754134|ref|YP_003027275.1| ribonuclease BN-like family protein [Streptococcus suis P1/7]
gi|253756068|ref|YP_003029208.1| ribonuclease BN-like family protein [Streptococcus suis BM407]
gi|251816597|emb|CAZ52235.1| ribonuclease BN-like family protein [Streptococcus suis SC84]
gi|251818532|emb|CAZ56363.1| ribonuclease BN-like family protein [Streptococcus suis BM407]
gi|251820380|emb|CAR46967.1| ribonuclease BN-like family protein [Streptococcus suis P1/7]
gi|319758704|gb|ADV70646.1| hypothetical protein SSUJS14_1586 [Streptococcus suis JS14]
Length = 307
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 27/251 (10%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
L+S+FP ++ LA L + F V ++ VV P+ + ++ I VL P+
Sbjct: 38 LISIFPILL---TLANLLPYYPFDVDMILSVVAEFVPDKLYPSVSSFITSVLTKPSSSWL 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS------FGYVLLASVTLVI 148
IS L + S + L+ + N+AY + E R + I LI ++L S+TL+
Sbjct: 95 GISILTTLWTLSRSMTILQKAFNKAYGINEHRDFIIGHLIGIFLGIGLQVIILLSITLLT 154
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKI 207
+Y+ K P L + + ++ALF L+ ++ FLP + K+
Sbjct: 155 FG------QAVFSYINKLVPIEDAWLKGLLSQTQLVGLMALFTALVMLYFFLPNVRIKKV 208
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL-YMLGVFF---- 262
+ PG +F ++ LF+ Y+ ++ + I+T +VFL +ML F
Sbjct: 209 RYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLDF----RIVTAVVFLVFMLWFIFMAQV 264
Query: 263 -ILGAELNASM 272
I+GA +NA++
Sbjct: 265 LIIGAMINATV 275
>gi|328956776|ref|YP_004374162.1| putative integral inner membrane protein with ribonuclease fold
[Carnobacterium sp. 17-4]
gi|328673100|gb|AEB29146.1| putative integral inner membrane protein with ribonuclease fold
[Carnobacterium sp. 17-4]
Length = 331
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 14/267 (5%)
Query: 14 DAIEHFVE--EDGWAMA------SHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVI 63
D +HF+E + WA A + ++ LLS+FP ++ AN+ + A +P V
Sbjct: 15 DKFKHFLEVFKPNWARAEVSANAAQLAYFTLLSLFPILLVVANVIPLFPIDAADILPMVE 74
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V V+A PI + L + A + I++L +A S AL+ LN Y V
Sbjct: 75 TAVPPDIYNVLA-PILENYLSSSSGGAISIGLITSLWSA---SKAFNALQDVLNEVYGVE 130
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ ++ I RL+SF L + ++ FVFV L ++ F +L+L +++ +
Sbjct: 131 KRNNFIIVRLVSFLVQLAIVAIVGVVIFVFVFGEFILLFLEDFVGIELDLVLQVFSYKWL 190
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L + + V+ +P + I LPG +F I W+V + FT Y+ + A
Sbjct: 191 VLFIVLILIITMVYFLVPNHRMHIKYALPGAVFATIGWMVLSQAFTLYVQFAGGEAAASA 250
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA 270
+ +++LY+ + +LGA +NA
Sbjct: 251 TFGVFIVLMLWLYLSAIILLLGALINA 277
>gi|315037851|ref|YP_004031419.1| hypothetical protein LA2_03230 [Lactobacillus amylovorus GRL 1112]
gi|325956325|ref|YP_004291737.1| hypothetical protein LAC30SC_03130 [Lactobacillus acidophilus 30SC]
gi|312275984|gb|ADQ58624.1| hypothetical protein LA2_03230 [Lactobacillus amylovorus GRL 1112]
gi|325332890|gb|ADZ06798.1| hypothetical protein LAC30SC_03130 [Lactobacillus acidophilus 30SC]
gi|327183144|gb|AEA31591.1| hypothetical protein LAB52_03085 [Lactobacillus amylovorus GRL
1118]
Length = 305
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 23/224 (10%)
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-- 120
+D VF P+ I+K I I +L + G + + A + S+ V A+R+ NR Y
Sbjct: 67 LDFVF---PDQISKYIMPIINSLLKTTSTGYMSFGIVLAVWSFSSLVNAIRLGENRLYGV 123
Query: 121 RVVEMR----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
R +E++ ++ TR+I+ + L M +F LAL + ++ L + +
Sbjct: 124 RQIELKLSIVNFLWTRMITIAFTTL-------MIILFTGATLALVFGQQLLHFLSPIFQL 176
Query: 177 -------IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
I++ R +L + + + +++ LP K K I PGVI T I W+ + LF+
Sbjct: 177 PVEEIDKIFSYRYPVVLLMMILAVYYLNYVLPNIKLKKRVIWPGVIVTVIGWLALSFLFS 236
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y+ F Y + + + +++L + + F+LG +NA+++
Sbjct: 237 FYLHHFPITWENYGIIGTFIIFMLWLNIAAILFLLGVGVNATIV 280
>gi|218132840|ref|ZP_03461644.1| hypothetical protein BACPEC_00701 [Bacteroides pectinophilus ATCC
43243]
gi|217991713|gb|EEC57717.1| hypothetical protein BACPEC_00701 [Bacteroides pectinophilus ATCC
43243]
Length = 283
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 117/266 (43%), Gaps = 19/266 (7%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ I +D A+ S LLS FPFI L ++P DV+ +
Sbjct: 15 FQIINKIKNDDLPGYAAQSSYFILLSFFPFITL------LLSLIHYLPLEYDVLMQVLND 68
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSS--------NGVEALRISLNRAYRVVE 124
+I + + + GL+ S+++ FS+ G +L N + + E
Sbjct: 69 IIPAYFKEAAVSFVG----GLYNSSSISFTGFSAIVTLWAAGRGFMSLMKGFNAIHGIAE 124
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R++ + R IS LL + + + V L + ++FP L ++ + + +
Sbjct: 125 DRNFIVRRSISSVQTLLFIIIIAALLIFVVFGNKLLGFTSRYFPYLAIIIEAVIDIKWLF 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L + +F+ F+P+ + + + LPG + + + W ++++ Y V +TY+ M+ G
Sbjct: 185 FPVLLTLAFLFMFKFIPSRRLPLFAQLPGAVISSVGWYGFSLIYAVY-VNNNTYTAMFGG 243
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
L +++ LV+LY + GAE N+
Sbjct: 244 LGTLILALVWLYSCMMILFFGAEFNS 269
>gi|146319270|ref|YP_001198982.1| hypothetical protein SSU05_1616 [Streptococcus suis 05ZYH33]
gi|146321474|ref|YP_001201185.1| hypothetical protein SSU98_1627 [Streptococcus suis 98HAH33]
gi|145690076|gb|ABP90582.1| Predicted membrane protein [Streptococcus suis 05ZYH33]
gi|145692280|gb|ABP92785.1| Predicted membrane protein [Streptococcus suis 98HAH33]
gi|292558903|gb|ADE31904.1| RNase BN [Streptococcus suis GZ1]
Length = 313
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 27/250 (10%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
L+S+FP ++ LA L + F V ++ VV P+ + ++ I VL P+
Sbjct: 44 LISIFPILL---TLANLLPYYPFDVDMILSVVAEFVPDKLYPSVSSFITSVLTKPSSSWL 100
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS------FGYVLLASVTLVI 148
IS L + S + L+ + N+AY + E R + I LI ++L S+TL+
Sbjct: 101 GISILTTLWTLSRSMTILQKAFNKAYGINEHRDFIIGHLIGIFLGIGLQVIILLSITLLT 160
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKI 207
+Y+ K P L + + ++ALF L+ ++ FLP + K+
Sbjct: 161 FG------QAVFSYINKLVPIEDAWLKGLLSQTQLVGLMALFTALVMLYFFLPNVRIKKV 214
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL-YMLGVFF---- 262
+ PG +F ++ LF+ Y+ ++ + I+T +VFL +ML F
Sbjct: 215 RYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLDF----RIVTAVVFLVFMLWFIFMAQV 270
Query: 263 -ILGAELNAS 271
I+GA +NA+
Sbjct: 271 LIIGAMINAT 280
>gi|300114181|ref|YP_003760756.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299540118|gb|ADJ28435.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 447
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 130/277 (46%), Gaps = 28/277 (10%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E+ +A+ ++ ALL++FP + ++ G + V ++ + G
Sbjct: 32 DVLLRVKNELSEDKLTVIAAGVAFYALLAIFPALTALVSIYGLVADPADVQQQLNTLSGF 91
Query: 70 WPEVIAKPITDEILQVLA--VPAKGLFTISA-LAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D++ + A A G+ I + L A + ++ G++ L +LN Y E R
Sbjct: 92 IPAEAQTLLNDQLSSITAHSQTALGVGVIGSILLALWGATKGLKTLMEALNVVYDEKETR 151
Query: 127 SW---YITRLI-SFGYVLLASVTLVIMSFVFVAIPLAL------AYVRKFFPALGNLLLI 176
+ T LI +FG ++L VI + VA+P L A VR + + L+
Sbjct: 152 GFLKLNATALILTFGALMLG----VIAIGLVVALPALLGNFGLGADVRTW------VSLL 201
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
W + ML GL V+ + P+ ++ + + G + + W+ +V F++Y+ F
Sbjct: 202 RWPVLAFVAML----GLAVVYRYGPSRSQPRWHWVSWGAVLATVLWIAASVGFSYYVSNF 257
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
S+Y+ Y L ++ L++L++ +LGAELNA M
Sbjct: 258 SSYNETYGSLGGVVVFLMWLFITAFIILLGAELNAEM 294
>gi|261367968|ref|ZP_05980851.1| YihY family protein [Subdoligranulum variabile DSM 15176]
gi|282569951|gb|EFB75486.1| YihY family protein [Subdoligranulum variabile DSM 15176]
Length = 281
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF+ ++ ++ F+P K + LPG IFT + W+V + +F+ YIV F S +Y L +I
Sbjct: 193 LFVLILLIYTFVPGGKRSLRGQLPGTIFTTVGWLVFSRIFSFYIVHFWKLSYIYGSLTAI 252
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ +++L ++ LGA LNA++
Sbjct: 253 ILMILWLDIIINLLFLGAALNAAL 276
>gi|227819758|ref|YP_002823729.1| ribonuclease [Sinorhizobium fredii NGR234]
gi|227338757|gb|ACP22976.1| putative ribonuclease protein [Sinorhizobium fredii NGR234]
Length = 330
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 128/271 (47%), Gaps = 12/271 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + + EE + +A+ +S LL++FP + +L GF+ + + + V+
Sbjct: 34 IRDVFWRVVSEISEERVFLIAAGVSFYLLLALFPALGALVSLYGFVANPSDIGSHMAVLD 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P I D++ + A L F L + + ++NG+ AL ++N AY E
Sbjct: 94 ELLPPGSFDLIADQLKSLTTQKASTLSLGFIGGLLVSLWSAANGIAALFDAMNVAYGEKE 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGRI 182
R L+ + A + VI+ +P LAY+ ++ L + R
Sbjct: 154 KRGIVSRTLLCLAFTFAALLFAVILIVAIGVLPAMLAYLWLDRWVEILTRV------ARW 207
Query: 183 YATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A ++ +G + ++ + P+ ++K+ + G +F+ + W+ + ++++Y+ F+ Y+
Sbjct: 208 PAILILATLGTVLIYRYGPSRERAKLRWLNWGAVFSTLLWLAASWIYSYYLENFANYNAT 267
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L +++ ++++++ V I GA LNA +
Sbjct: 268 YGALGALIGFMMWVWISMVILITGALLNAEL 298
>gi|298490493|ref|YP_003720670.1| ribonuclease BN ['Nostoc azollae' 0708]
gi|298232411|gb|ADI63547.1| ribonuclease BN ['Nostoc azollae' 0708]
Length = 291
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 121/259 (46%), Gaps = 25/259 (9%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLG---AHQFVPTVID----VVFGAWPEVIAKPI 78
+AS I+ +A+LS+FP I+ G + + F+ + V AW +I++
Sbjct: 32 GLASEIAFNAMLSLFPAIIAVLTAIGLVAESLQNTFIQATMQLSQIVPEEAW-SLISEFA 90
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EMRSWYITRLISF 136
T EI + +GLF++S + A + +S V + ++ ++ +R ++ +LIS
Sbjct: 91 TKEIAES---KNRGLFSVSFVIAIWTASGAVSTAMTAFDQIEQISPENVRPFWKAKLISL 147
Query: 137 GYVLLASVTLVIMSF-VFVAIPLALAYVRKFFPALGN----LLLIIWNGRIYATMLALFI 191
G + + L++ SF VF++ L +R GN LL IW ++ L +
Sbjct: 148 GLTIGTILLLILASFLVFISDLLLGILIR------GNGYLAFLLHIWQLLLWPLALVIVA 201
Query: 192 GLI-FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
V+ + P+ ++PG + I W + + LF Y+ F Y+ +Y + + +
Sbjct: 202 ATFSLVYRYGPSLWKPGTPLMPGAVLAAIFWAIVSALFRFYVTNFGNYNKVYGTVGTFIV 261
Query: 251 CLVFLYMLGVFFILGAELN 269
+++L+M ++G +LN
Sbjct: 262 LMLWLWMGAFVLLVGKQLN 280
>gi|16264680|ref|NP_437472.1| hypothetical protein SM_b21356 [Sinorhizobium meliloti 1021]
gi|307318683|ref|ZP_07598116.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|15140818|emb|CAC49332.1| conserved hypothetical membrane protein [Sinorhizobium meliloti
1021]
gi|306895710|gb|EFN26463.1| ribonuclease BN [Sinorhizobium meliloti AK83]
Length = 330
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 127/278 (45%), Gaps = 19/278 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ F VF I EE +A+ +S LLS+FP + ++ G + +
Sbjct: 34 MRDVFWRVFSEIG-------EERVMLIAAGVSFYLLLSLFPALGALVSIYGLVADPSEIG 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLN 117
T + ++ P I D++ + L F +S + + ++NG+ AL ++N
Sbjct: 87 THVGILQALLPADSYGLIMDQLETLTTQKPSTLGIGFFVSLSISLWLAANGIAALFDAMN 146
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLL 175
AY E R + L+ + A + V + +P LAYV ++ L
Sbjct: 147 VAYGEREKRGFLSRTLLCLAFTFAALLFAVALIAAIGVVPAVLAYVWVDRWVE------L 200
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ R A +L + G I ++ F P+ ++K+ + G +F+ + W+ + LF++Y+
Sbjct: 201 VTRAARWPAVLLLVTFGTILIYRFGPSRERAKLRWLNWGAVFSTLFWLAASWLFSYYLEH 260
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F+ Y+ Y L ++ + ++++ + I+GA +NA +
Sbjct: 261 FANYNATYGALGALAGLMTWVWISVMILIIGALINAEL 298
>gi|315125588|ref|YP_004067591.1| ribonuclease protein [Pseudoalteromonas sp. SM9913]
gi|315014101|gb|ADT67439.1| ribonuclease protein [Pseudoalteromonas sp. SM9913]
Length = 315
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 132/277 (47%), Gaps = 26/277 (9%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI ++ ++ +A+ ++ ALL++FP I ++ + + + +
Sbjct: 22 WDITRRIVKQMSRDNLSLVAAGVAFYALLAIFPAIAALVSVYAYFTSPNDISVYLSQFMA 81
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAA----YFSSNGVEALRISLNRAYRVVE 124
P+ + I ++ LA ++ ++SAL + SS G +AL + N +Y E
Sbjct: 82 LLPQSTQEIILSQV-SSLAQKSQTSLSLSALGTLLLTIWSSSKGSQALITACNISYHEYE 140
Query: 125 MRSWYITRLI----SFGYVLLASVTLVIMSFVFVAIPLALAY--VRKFFPALGNLLLIIW 178
RS+ +L+ S G +++A + LVI+ +PLAL +++ L ++LI W
Sbjct: 141 KRSFLKAQLVRLLFSVGAIVVAVIALVIIGI----LPLALNLLGIKESIDFL--IMLISW 194
Query: 179 NGRIYATMLALFIG--LIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+LAL L+ ++ + P K+ K + G + W+V + F+ Y+ F
Sbjct: 195 ------PLLALTFNFALLILYRYAPHRKAAKWRWVTVGSFTATVLWIVASFGFSFYVSHF 248
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
++Y+ Y L ++ L++L++ ILGA +NA++
Sbjct: 249 ASYNETYGSLGGVVIMLMWLFISAYIIILGATINAAL 285
>gi|312863911|ref|ZP_07724149.1| YihY family protein [Streptococcus vestibularis F0396]
gi|311101447|gb|EFQ59652.1| YihY family protein [Streptococcus vestibularis F0396]
Length = 313
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 118/247 (47%), Gaps = 21/247 (8%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP IV AN+ +L ++ + P+ P + + + + P+ L
Sbjct: 37 ILTVFPLIVIAANVFPYLNID--TTDLLKFMNEHLPKQFYAPAANVVQDIFSTPSGQLLG 94
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV- 154
+++L + + +L+ ++N+ Y E R +I+ ++ G++ L V L +++F +
Sbjct: 95 VASLTGFWTMIKSLSSLQKAINKVYGASEHRDVFISHIVG-GFMSL--VILFLLTFALML 151
Query: 155 --AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSIL 211
I L + + +P + +I N ++ +F+G++ ++ LP K KI ++
Sbjct: 152 STIIQSVLRVITQTYPIGSKMTQLILNSIQPLSIAVVFLGMMVLYFVLPNVKIRKIRYVM 211
Query: 212 PGVIFTWISWVVG--AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF-----IL 264
PG IFT + V+G + LF Y++ + SIM +F++ML F IL
Sbjct: 212 PGTIFT--TLVIGYLSNLFGTYVIRTLSRLVDIKLFGSIM---IFVFMLWFIFLARILIL 266
Query: 265 GAELNAS 271
GA NA+
Sbjct: 267 GAVFNAT 273
>gi|294499346|ref|YP_003563046.1| YihY family protein [Bacillus megaterium QM B1551]
gi|295704699|ref|YP_003597774.1| YihY family protein [Bacillus megaterium DSM 319]
gi|294349283|gb|ADE69612.1| YihY family protein [Bacillus megaterium QM B1551]
gi|294802358|gb|ADF39424.1| YihY family protein [Bacillus megaterium DSM 319]
Length = 276
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 16/263 (6%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF-GAWPEVIAK 76
F E + A+ + LLS PFI+F +L F + T ++F + A
Sbjct: 11 RFFTERFFDQAAQTAYYFLLSFVPFIIFLFSLLSFFP----IDTNNLLIFIEPFTPKSAY 66
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY---ITRL 133
+ + ++ + K + + S LA + +S +++L SLN AY + +++ I L
Sbjct: 67 DVIERSIETVNNSGKKVLSFSLLATFWLASMAIQSLVRSLNDAYHIQRKQTFLRGLINDL 126
Query: 134 I-SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFI 191
I +FG++++ +++L + V L L V + ++ W R L L
Sbjct: 127 ILTFGFMVVVAISLFVPIIEEVIRHLVLTKVH-----VPDIWFQSWTTIRWGIGTLFLLG 181
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
I + +P+A+ +LPG +F+ + W V + F +Y V F +YS +Y L SI+
Sbjct: 182 FFILFYKLMPSARVTWKDVLPGAVFSTLGWQVVSTGFGYY-VQFGSYSQIYGQLGSIIIL 240
Query: 252 LVFLYMLGVFFILGAELNASMII 274
+V+ Y+ ++G +N + I
Sbjct: 241 MVWFYLTAAILLIGGLINGNKFI 263
>gi|330991211|ref|ZP_08315163.1| Putative ribonuclease-like protein yfkH [Gluconacetobacter sp.
SXCC-1]
gi|329761704|gb|EGG78196.1| Putative ribonuclease-like protein yfkH [Gluconacetobacter sp.
SXCC-1]
Length = 313
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 7/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V ++ + V + A+ + A LS+FP + +L G L Q V + V+
Sbjct: 19 VRQVLRQVARNIVSDQITLAAAGCAFYATLSLFPAMSTLISLYGLLFDLQTVEPQLVVLR 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P I D I ++A L IS A + +S +L +++N AY E
Sbjct: 79 NLLPPSAYGVIGDRIHLLVAESHSSLTLNLIISTTIATWSASAATRSLIMAMNVAYNTPE 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF---PALGNL-LLIIWNG 180
RS+ + ++ G + ++ + VA+P + Y+ + P G++ LLI G
Sbjct: 139 TRSFVRFQAMAMGLTFCSICGGILTLALMVALPFLIDYLPEHLSLAPPPGSVELLIHMGG 198
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
I + L + + + ILPG + + W++ + F++Y+ + YS
Sbjct: 199 PILMLLFVLSLCSVLYRFGPNRPHTYWRCILPGSVGATLLWLLSSSGFSYYVSHIAGYSA 258
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y L + + +++ Y+ +LGAELNA + I
Sbjct: 259 TYGPLGAFIAIMMWFYVSAYVVLLGAELNAGLEI 292
>gi|322516266|ref|ZP_08069196.1| YihY family protein [Streptococcus vestibularis ATCC 49124]
gi|322125239|gb|EFX96612.1| YihY family protein [Streptococcus vestibularis ATCC 49124]
Length = 319
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 118/247 (47%), Gaps = 21/247 (8%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP IV AN+ +L ++ + P+ P + + + + P+ L
Sbjct: 43 ILTVFPLIVIAANVFPYLNID--TTDLLKFMNEHLPKQFYAPAANVVQDIFSTPSGQLLG 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV- 154
+++L + + +L+ ++N+ Y E R +I+ ++ G++ L V L +++F +
Sbjct: 101 VASLTGFWTMIKSLSSLQKAINKVYGASEHRDVFISHIVG-GFMSL--VILFLLTFALML 157
Query: 155 --AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSIL 211
I L + + +P + +I N ++ +F+G++ ++ LP K KI ++
Sbjct: 158 STIIQSVLRVITQTYPIGSKMTQLILNSIQPLSIAVVFLGMMVLYFVLPNVKIRKIRYVM 217
Query: 212 PGVIFTWISWVVG--AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF-----IL 264
PG IFT + V+G + LF Y++ + SIM +F++ML F IL
Sbjct: 218 PGTIFT--TLVIGYLSNLFGTYVIRTLSRLVDIKLFGSIM---IFVFMLWFIFLARILIL 272
Query: 265 GAELNAS 271
GA NA+
Sbjct: 273 GAVFNAT 279
>gi|328946554|gb|EGG40693.1| ribonuclease BN [Streptococcus sanguinis SK1087]
Length = 313
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 11/243 (4%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
L+SVFP ++ N+ + H + + + PE + + + +VL P+ GL +
Sbjct: 48 LISVFPLLLIVVNILPYF--HIPIADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLS 105
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
S L+A + S + L+I+ N+AY V + R R++S L + + F+ +
Sbjct: 106 FSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLISHRVMSLFVSLGLQILFALALFLTMF 165
Query: 156 IPLALAYVRKFFPALGNLLLIIWN---GRIYATMLALFIGLIFVHLFLPAAK-SKIMSIL 211
++L ++R ++ L + N IYA LF L+ + FLP K +K +L
Sbjct: 166 GHMSLDFLRTYWKLDSQLYQHLQNFTEPLIYAL---LFSVLVMFYYFLPNVKINKKRYVL 222
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI-MTCLVFLY-MLGVFFILGAELN 269
PG F + + +F+ Y+ + + +SI M ++F + M+ I+GA LN
Sbjct: 223 PGSAFVLLIILALLNIFSVYMDNYLNHLVDVRFFSSIIMVVMMFWFIMIAKILIVGAVLN 282
Query: 270 ASM 272
AS+
Sbjct: 283 ASI 285
>gi|325844530|ref|ZP_08168226.1| YihY family protein [Turicibacter sp. HGF1]
gi|325489063|gb|EGC91448.1| YihY family protein [Turicibacter sp. HGF1]
Length = 309
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 125/260 (48%), Gaps = 13/260 (5%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
E + + + I+ + ++++ P +V L +L + +++ + A+ K
Sbjct: 15 EQLKKREIKGLPEQIAFNLVMAIVPLLVVIVQLGTYLSLN---TDLVEYLIMAYAPNELK 71
Query: 77 PITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + + P+ +F + + ++ + S G + + N Y+V M+ Y+ R+
Sbjct: 72 LLLMNLFSTTSTPSGNIFFLITTGISFMWLISKGFYGIAAAANTTYQVPYMKFAYLERIF 131
Query: 135 SFGYVLLASVTLVIMS-FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
SF V+ ++L +++ F L + + + + LL+I+N I ++++ F+G
Sbjct: 132 SFLIVIFMILSLALVTVFALFGQGLIILIFKLLNIHIQSHLLLIFN--IIKSLIS-FLGY 188
Query: 194 I--FVHLFL--PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ LF P+ K ++ I+PG + T I W V ++ FT Y + Y+ Y L+ I+
Sbjct: 189 FSFFLSLFYLAPSIKMRVGEIIPGALVTSIGWSVSSIGFTFYANHIANYNKFYGSLSVII 248
Query: 250 TCLVFLYMLGVFFILGAELN 269
L +L++LG ++G ++N
Sbjct: 249 MLLFWLFILGYTIMIGLQVN 268
>gi|312137801|ref|YP_004005137.1| ribonuclease bn [Rhodococcus equi 103S]
gi|311887140|emb|CBH46449.1| ribonuclease BN [Rhodococcus equi 103S]
Length = 362
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 126/277 (45%), Gaps = 27/277 (9%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGA 69
++ F + +A+ ++ A+L++FP ++ +L G G Q V V+++V
Sbjct: 37 VLRKTAREFGTDQCTDLAAALTYYAVLALFPALLVIVSLLGVFGQGQRTVDAVMEMVGQL 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P + + + Q++A P+ G+ + + A +S++G V A ++NR Y + E R
Sbjct: 97 GPTNAVDTLREPVEQLVAAPSAGIALVIGVLGALWSASGYVGAFARAMNRIYEIEEGRPI 156
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAI-----------PLALAYVRKFFPALGNLLLII 177
+ R + F V+ +F VA+ P+A + LG+ +
Sbjct: 157 WKLRPLMF----------VVTAFCLVAVGASGLMLVISGPVARSVGDVL--GLGDAAVTA 204
Query: 178 WN-GRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
W+ + +L + + + ++ P ++ K I PG + W+ + LF Y+ F
Sbjct: 205 WDIAKWPVLLLVVGVLVAVLYYVTPNVSQPKFRWISPGAAIAIVVWIGASALFAVYVSNF 264
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
++Y+ Y LA + L++L++ + + GAE +A +
Sbjct: 265 ASYNKTYGSLAGAVVFLLWLWITNLALLFGAEFDAEL 301
>gi|325676097|ref|ZP_08155779.1| tRNA processing ribonuclease BN [Rhodococcus equi ATCC 33707]
gi|325553137|gb|EGD22817.1| tRNA processing ribonuclease BN [Rhodococcus equi ATCC 33707]
Length = 362
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 126/277 (45%), Gaps = 27/277 (9%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGA 69
++ F + +A+ ++ A+L++FP ++ +L G G Q V V+++V
Sbjct: 37 VLRKTAREFGTDQCTDLAAALTYYAVLALFPALLVIVSLLGVFGQGQRTVDAVMEMVGQL 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P + + + Q++A P+ G+ + + A +S++G V A ++NR Y + E R
Sbjct: 97 GPTNAVDTLREPVEQLVAAPSAGIALVIGVLGALWSASGYVGAFARAMNRIYEIEEGRPI 156
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAI-----------PLALAYVRKFFPALGNLLLII 177
+ R + F V+ +F VA+ P+A + LG+ +
Sbjct: 157 WKLRPLMF----------VVTAFCLVAVGASGLMLVISGPVARSVGDVL--GLGDAAVTA 204
Query: 178 WN-GRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
W+ + +L + + + ++ P ++ K I PG + W+ + LF Y+ F
Sbjct: 205 WDIAKWPVLLLVVGVLVAVLYYVTPNVSQPKFRWISPGAAIAIVVWIGASALFAVYVSNF 264
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
++Y+ Y LA + L++L++ + + GAE +A +
Sbjct: 265 ASYNKTYGSLAGAVVFLLWLWITNLALLFGAEFDAEL 301
>gi|91215702|ref|ZP_01252672.1| hypothetical protein P700755_02257 [Psychroflexus torquis ATCC
700755]
gi|91186168|gb|EAS72541.1| hypothetical protein P700755_02257 [Psychroflexus torquis ATCC
700755]
Length = 307
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 126/279 (45%), Gaps = 14/279 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVV 66
++D++ I ++ A I+ S +++FPF++F NL F+ F +++
Sbjct: 35 LYDLLSLYISGIIKGTFSTRAGSIAFSFFMAIFPFLLFVLNLIPFVWFIDDFQQELLNYF 94
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D + P GL + + + + SNGV A+ +Y
Sbjct: 95 EELLPPQTSGLFQDIFFDIANNPRAGLLSFVFVLSIFLMSNGVNAIFTGFEFSYHTK--- 151
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAI--PLALAYVRKFFPALG---NLLLIIWNGR 181
I R I Y+ V +++ + +A+ + ++V F ++G + L++ GR
Sbjct: 152 ---INRTIIRQYIAAVGVAIIVAILLLIAVIATVYFSFVIDQFTSIGVVGDSLVLARYGR 208
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L +G+ ++ F K + PG FT I V+ LF+ Y+ FS Y+ +
Sbjct: 209 FAILIIVLILGISILYYFGTREGRKTRFLSPGSFFTTILIVLTTYLFSIYVENFSAYNKL 268
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y + +++ ++++++ +LG ELN ++ Y ++K
Sbjct: 269 YGSIGALLILMLYIWLNSNILLLGFELNGAL--YNLKRK 305
>gi|260907006|ref|ZP_05915328.1| putative ribonuclease BN [Brevibacterium linens BL2]
Length = 312
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 137/281 (48%), Gaps = 22/281 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ + I H + + G +A+ ++ ALLS+ P + ++ G +G + + + V G
Sbjct: 42 ILTNTIRHVISDQGLDLAAGLAFYALLSMAPATLALVSMLGVVGEAK---STTEAVLGLT 98
Query: 71 PEV---IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMR 126
++ A+ I + ++++ PA GL I ++A A +SS+ V A + NRAY V E R
Sbjct: 99 SDLSTEAAQAIRPIVTELVSSPAAGLTLIVSVAVAIWSSSKYVGAFGRAANRAYAVEETR 158
Query: 127 S-WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GR--- 181
W + ++ ++L + + + V+ P+A + + LG + ++IW+ R
Sbjct: 159 PLWKLKPMMLLITLVLLLLMAGLGLLLVVSGPIAESIGK--LVGLGPVAVMIWSIARWPV 216
Query: 182 -IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
I+ MLA+ + L + + K + SI G ++ +V ++ F YI F Y+
Sbjct: 217 VIFFVMLAIAL-LYYATPNVKKVKFRWSSI--GAFVAPMTLIVVSLGFVLYINNFDNYNA 273
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y + ++ +L+M+ + I G+EL+A + R +P
Sbjct: 274 TYGAIGGVIVGFAWLWMVNLALIFGSELDAEIR----RSRP 310
>gi|325690874|gb|EGD32875.1| ribonuclease BN [Streptococcus sanguinis SK115]
Length = 307
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 116/246 (47%), Gaps = 11/246 (4%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
L+SVFP ++ N+ + H V + + PE + + + +VL P+ L +
Sbjct: 43 LISVFPLLLIVVNILPYF--HIPVADFLTAIKDMLPETLYDVVAKVMREVLTQPSTSLLS 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
S L+A + S + L+I+ N+AY V + R R++S L + + F+ +
Sbjct: 101 FSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLISHRVMSLFVSLGLQILFALALFLTMF 160
Query: 156 IPLALAYVRKFFPALGNLLLIIWN---GRIYATMLALFIGLIFVHLFLPAAK-SKIMSIL 211
++L ++R ++ L + N IYA + A+ L+ + FLP K +K +L
Sbjct: 161 GHMSLDFLRTYWKLDNQLYQHLQNFTEPLIYALLFAV---LVMFYYFLPNVKINKKRYVL 217
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI-MTCLVFLY-MLGVFFILGAELN 269
PG F ++ + +F+ Y+ + + +SI M ++F + M+ I+GA LN
Sbjct: 218 PGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSIIMVVMMFWFIMIAKILIVGAVLN 277
Query: 270 ASMIIY 275
AS+ Y
Sbjct: 278 ASIQSY 283
>gi|293374361|ref|ZP_06620688.1| YihY family protein [Turicibacter sanguinis PC909]
gi|292647024|gb|EFF65007.1| YihY family protein [Turicibacter sanguinis PC909]
Length = 309
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 125/260 (48%), Gaps = 13/260 (5%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
E + + + I+ + ++++ P +V L +L + +++ + A+ K
Sbjct: 15 EQLKKREIKGLPEQIAFNLVMAIVPLLVVIVQLGTYLSLN---TDLVEYLIMAYAPNELK 71
Query: 77 PITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + + P+ +F + + ++ + S G + + N Y+V M+ Y+ R+
Sbjct: 72 LLLMNLFSTTSTPSGNIFFLITTGISFMWLISKGFYGIAAAANTTYQVPYMKFAYLERIF 131
Query: 135 SFGYVLLASVTLVIMS-FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
SF V+ ++L +++ F L + + + + LL+I+N I ++++ F+G
Sbjct: 132 SFLIVIFMILSLALVTVFALFGQGLIILIFKILNIHIQSHLLLIFN--IIKSLIS-FLGY 188
Query: 194 I--FVHLFL--PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ LF P+ K ++ I+PG + T I W V ++ FT Y + Y+ Y L+ I+
Sbjct: 189 FSFFLSLFYLAPSIKMRVGEIIPGALVTSIGWSVSSIGFTFYANHIANYNKFYGSLSVII 248
Query: 250 TCLVFLYMLGVFFILGAELN 269
L +L++LG ++G ++N
Sbjct: 249 MLLFWLFILGYTIMIGLQVN 268
>gi|163745189|ref|ZP_02152549.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
gi|161382007|gb|EDQ06416.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
Length = 309
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 24/286 (8%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
I +D +++ ++ +++ ++ A+LS+FP + L G + V ++
Sbjct: 11 AIYWDAFKASLKQAASDNLALISAGVAFFAMLSLFPALAALIALLGLISDPVVVIAQLED 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRV 122
V G P+ + I ++ ++ A L +S L A + + GV A+ I LN Y
Sbjct: 71 VRGLLPDDVYDIINTQVTGLVTARADTLGWAGIVSLLVALWSARAGVGAMVIGLNSVY-- 128
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFV----FVAIPLALAYVR--KFFPALGNLLLI 176
R+ + + + LL +V+LV + V V P+ LA++ F A+ +LL
Sbjct: 129 -NERNRNAAK--HYLHALLLTVSLVAVGIVALLAVVVAPIILAFIPLGPFGNAVADLL-- 183
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTF 235
R + LF G+ ++ F P ++ + L G I +SW V ++ F++Y+ F
Sbjct: 184 ----RWTVATVVLFAGVGVLYRFGPNRRAARLPWLSSGAILAVLSWAVISIGFSYYVANF 239
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y+ +Y + +++ LV+L++ + GA LNA + R KP
Sbjct: 240 GNYNQVYGSIGAVIAMLVWLWISSFLILFGAALNAQV---ERRTKP 282
>gi|58038914|ref|YP_190878.1| t-RNA-processing ribonuclease BN [Gluconobacter oxydans 621H]
gi|58001328|gb|AAW60222.1| t-RNA-processing ribonuclease BN [Gluconobacter oxydans 621H]
Length = 348
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 26/279 (9%)
Query: 17 EHFVEEDGWAMASHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+H E G +S SLSA LS+FP I +L G Q V ++V+
Sbjct: 56 KHLFAEVG---SSQTSLSAAGCAFYATLSLFPAISSLISLYGLAFDLQTVEPQLEVLRHL 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFS-SNGVEALRISLNRAYRVVEMR 126
P I D I ++++ P L I +LA A +S S +++ +LN AY E R
Sbjct: 113 LPPSAYDLIGDRIHELISQPHSSLTIGLIFSLAIALWSASASTKSILSALNMAYNAQETR 172
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----PALGNLLLIIWNGR 181
S+ + I+ L A + + + VA P + Y+ + P LL+ +
Sbjct: 173 SFLKFQAIALSTTLTAILGAALTLALMVAAPALVDYLPRHVSFLSDPPFPVDLLLSYGAP 232
Query: 182 IYATMLA-------LFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ LA +FI + ++ F P ++ I PG I WV+ ++ F+ Y+
Sbjct: 233 MVVHTLAPLLMLLFVFIAVTLLYRFAPCRVHTQWRWIFPGSALATILWVITSLGFSWYVA 292
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F++Y Y L ++ +++ ++ + GAELNAS+
Sbjct: 293 HFASYGATYGPLGAVAAIMMWFFVSAYVVLFGAELNASL 331
>gi|110632679|ref|YP_672887.1| putative ribonuclease BN [Mesorhizobium sp. BNC1]
gi|110283663|gb|ABG61722.1| putative ribonuclease BN [Chelativorans sp. BNC1]
Length = 322
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
F I A + ++NG++AL ++N AY E R + L+S + L A++ L IM +
Sbjct: 115 FLIGLAIALWSANNGIKALFEAMNVAYDETEKRGFIKLNLLSLSFTL-ATLVLGIMLIIA 173
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP- 212
V + A+ + P L+ R +L G++ ++ F P+ + L
Sbjct: 174 VGVVPAVLAILGLSPWAETLIAF---ARWPTLLLVSMFGILMLYRFGPSRERPKWRWLSW 230
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
G + + W+ +V F++Y+ F+ Y Y L +I+ +++ ++ V I+GAE++A +
Sbjct: 231 GAVIATLVWLAASVAFSYYLQNFADYDATYGSLGAIIGLMMWTWISVVVLIVGAEIDAEI 290
>gi|300114541|ref|YP_003761116.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299540478|gb|ADJ28795.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 328
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 125/268 (46%), Gaps = 10/268 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI Y + +++ +A+ ++ ALL++FP +V ++ G + V D + G
Sbjct: 28 DIAYRIKDSLNDDNISIVAAGVAFYALLAIFPALVAMVSIYGIIADPADVQRQFDALSGI 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALA----AAYFSSNGVEALRISLNRAYRVVEM 125
P A+ + E L+ + A ++ A A + ++ G +A I+LN Y E
Sbjct: 88 LP-TEAQVLLSEQLRRITSQASTALSVGVGAGVILALWSATRGTKAFMIALNIVYGEKEK 146
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + I+ L A V ++ + V +P+ L+Y+ P + +L + + A
Sbjct: 147 RGFLKLNAIALILTLGAIVLAILALGMIVVLPILLSYLD--LPEIFQVLASLLPWLLLA- 203
Query: 186 MLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+GL ++ + P+ ++++ + G + + W+ G+ LF+ Y+ F+ Y+ Y
Sbjct: 204 -FTFILGLAVLYRYGPSRSEARWRWVSWGAVAATVLWIAGSALFSFYVANFAQYNKTYGS 262
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM 272
+ +++ L++ ++ +L AE NA M
Sbjct: 263 VGALIILLMWFFVTAYIILLAAEFNAEM 290
>gi|225378186|ref|ZP_03755407.1| hypothetical protein ROSEINA2194_03846 [Roseburia inulinivorans DSM
16841]
gi|225209992|gb|EEG92346.1| hypothetical protein ROSEINA2194_03846 [Roseburia inulinivorans DSM
16841]
Length = 290
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 26/245 (10%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVP----TVIDVVFGAWPEVIAK---PITDEILQVLAV 88
+LS PF++ ++L Q+ P T++ + A P+ I+ ITDE+
Sbjct: 38 ILSTIPFLMVFSSLL------QYTPITEGTLLKMYQTALPDYISAFLISITDEVYN---- 87
Query: 89 PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV---LLASVT 145
+ G+ +I+A+ A + ++ G++ + LN + E R+W++ RL + Y L A V
Sbjct: 88 RSVGIISITAIVAIWSAAKGIQYMTDGLNSVNDLEENRNWFVLRLWAIVYTIVFLFAVVF 147
Query: 146 LVIMSFVFVAI-PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK 204
+++ + LA+ Y+ P L +L +I R + LF+ + LP K
Sbjct: 148 TLVVLVFGNTLHDLAVEYI----PLLQSLTDLIVRLRGFVLFGILFVFFDIIFTMLPNKK 203
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
S +PG ++W V + + Y+ F+ +S MY L +I +++LY ++
Sbjct: 204 LTFKSQIPGAAICAVAWYVFSFALSIYVDYFNGFS-MYGSLTTIALIMLWLYFCMYIMMM 262
Query: 265 GAELN 269
AE+N
Sbjct: 263 SAEVN 267
>gi|229916047|ref|YP_002884693.1| ribonuclease BN [Exiguobacterium sp. AT1b]
gi|229467476|gb|ACQ69248.1| ribonuclease BN [Exiguobacterium sp. AT1b]
Length = 273
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 10/263 (3%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
++ F E + A+ ++ +LS FPF++F + GFL VI + PE
Sbjct: 9 VKRFFTERFFDQAAMLAYYFILSTFPFLLFVLGIVGFLPFTS--GDVIQALSLIMPEASY 66
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
K + I V L + S L A + SS V++L +LN AYR V ++++ L
Sbjct: 67 KLLEGNIEAVFDNSKLKLASFSILPALWISSMAVQSLVRALNDAYRAVRNKAFWRGVLQD 126
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI---IWN--GRIYATMLALF 190
+ LA + ++ S + I AL + + + ++ IW I T L LF
Sbjct: 127 IA-ITLALMFVLPFSLLVPVIETALREISSYVLFIDEIVTTYAQIWFYFRWIIGTSL-LF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+FV+ +LP+ + G F + ++ + +F++Y F+ Y Y L + +
Sbjct: 185 TVFVFVYKWLPSVSGTFKNSWAGAAFATVGILLVSNVFSYY-SQFANYEQFYGQLGAFIV 243
Query: 251 CLVFLYMLGVFFILGAELNASMI 273
L++ Y+ +LG LNA++I
Sbjct: 244 LLIWFYLAASVILLGGLLNATLI 266
>gi|116619409|ref|YP_821565.1| putative ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
gi|116222571|gb|ABJ81280.1| putative ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
Length = 283
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 39/274 (14%)
Query: 22 EDG-WAMASHISLSALLSVFPFIVFGANL-----AGFLGA--HQFVPTVIDVVFGAWPEV 73
+DG + A + SALLS FP + A + AGF+ A F+ ++
Sbjct: 21 DDGCFGFAKGAAYSALLSFFPVLTSAATILVQTRAGFVSATLQSFLSQIVP--------- 71
Query: 74 IAKPITDEIL----QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P T++++ +V+ GL ++ L + + +S +++L AYRV RS+
Sbjct: 72 ---PGTEDLVVQQFRVMGERPFGLLVVAGLISLWAASGVIKSLIEGFQAAYRVPRNRSFL 128
Query: 130 ITRLISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALGNLLLIIWN--GRI-- 182
++ VLL++V L+ S + V + A+ K P L N + +W R+
Sbjct: 129 HQSGVAMSLVLLSAVPLICASLLLVFGNQVERAVLNWMKVDPFL-NPVAWVWQFVSRMAR 187
Query: 183 ----YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+AT +A+ L + + P K + + G I + W + F Y+ + Y
Sbjct: 188 YLLAFATTIAVTASLYY---YGPYRKQRWRYVWRGAILATVLWFFATLGFAWYVRNIARY 244
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ MY + + + LV++Y++ + ++G E NA +
Sbjct: 245 NVMYGSIGAGIALLVWMYLIALIALMGCEFNAEL 278
>gi|27383151|ref|NP_774680.1| hypothetical protein blr8040 [Bradyrhizobium japonicum USDA 110]
gi|27356325|dbj|BAC53305.1| blr8040 [Bradyrhizobium japonicum USDA 110]
Length = 392
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 26/260 (10%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
A+A+ ++ +LL++FP I + G + +D V P + +++ +V
Sbjct: 114 ALAAGMTYYSLLAIFPAIAALVAIYGLFSDPSSITKHLDDVSSFIPGGAVEVAREQLTRV 173
Query: 86 LAVPAKGL-FTIS-ALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ L FT + LA + +S+N +++L +LN Y E R ++ +S G+ + A
Sbjct: 174 ATKSNRTLGFTFAIGLAISLWSANAAMKSLFDTLNIVYGEQEKRGFFKLNAMSLGFTVGA 233
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGRIYATMLALFIGLIFVHLFLP 201
+V V IP+ L YV L N L++ GR A +AL L ++ F P
Sbjct: 234 IAFVVAALGAVVVIPVVLHYV-----GLSNATDLLVRIGRWPALFVALAFALACIYRFGP 288
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVL---------FTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ +TWI+W A F+ Y F T++ Y L +++ +
Sbjct: 289 SRQAPR--------WTWITWGSAAAALLWLAASGLFSFYAANFGTFNATYGSLGAVVGFM 340
Query: 253 VFLYMLGVFFILGAELNASM 272
+L++ + +LGAELNA M
Sbjct: 341 TWLWISAIVILLGAELNAEM 360
>gi|320546458|ref|ZP_08040773.1| YihY family protein [Streptococcus equinus ATCC 9812]
gi|320448843|gb|EFW89571.1| YihY family protein [Streptococcus equinus ATCC 9812]
Length = 305
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 18/257 (7%)
Query: 28 ASHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
++ I LSA LL+ FP IV AN+ +L V ++ + P + ++
Sbjct: 28 SAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--VNILLAFMKKNLPTNLYPSVSA 85
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ + + P+ + ++ L A + S + +L+ ++N+AY V + R I RL+ L
Sbjct: 86 ITIDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVAQHRDVVIGRLVGVIGSL 145
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L L + + + L + + + +I + T++ + IGL+ ++ L
Sbjct: 146 LILFLLTFVLLFSTFLKVVLQIINSNYDLSDTMATVILHLSQPVTVITIVIGLMLLYFIL 205
Query: 201 PAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
P K K + ILPG IFT + V LF+ YI+ T+ M + + + ++F+ ML
Sbjct: 206 PNVKIKRLRYILPGTIFTSVVIVFLNSLFSSYIL--RTFERM-VDIKTFGSVVIFVLMLW 262
Query: 260 VFF-----ILGAELNAS 271
F ILGA NA+
Sbjct: 263 FIFLAHILILGAIFNAT 279
>gi|150376885|ref|YP_001313481.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
gi|150031432|gb|ABR63548.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
Length = 330
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 128/270 (47%), Gaps = 14/270 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + + EE +A+ +S LLS+FP + ++ G + + T + ++
Sbjct: 36 DVFWRVVSEIAEERVVLIAAGVSFYLLLSLFPALGALVSIYGLVADPSEIGTHMGILQAL 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ I D++ + L F IS + + ++NG+ AL ++N AY E R
Sbjct: 96 LPQDSYGLIMDQLKTLTTQKPSTLGMGFFISLSISLWLAANGIAALFDAMNVAYGEREKR 155
Query: 127 SWYITRLISFGYV---LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ ++ + LL +V L++ V A+ LA +V ++ L+ R
Sbjct: 156 GFLFRTVLCIAFTFAALLFAVALIVAIGVVPAV-LAHLWVDRWVE------LVTRVARWP 208
Query: 184 ATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A +L + G + ++ F P+ ++K+ + G +F+ + W + LF++Y+ F+ Y+ Y
Sbjct: 209 ALLLLVTFGTVLIYRFGPSRERAKLRWLNWGAVFSTLFWFAASWLFSYYLEHFANYNATY 268
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
L ++ + ++++ + I+GA +NA +
Sbjct: 269 GALGALAGLMTWVWISVMILIIGALINAEL 298
>gi|262047121|ref|ZP_06020080.1| methionine aminopeptidase [Lactobacillus crispatus MV-3A-US]
gi|295692490|ref|YP_003601100.1| hypothetical protein LCRIS_00628 [Lactobacillus crispatus ST1]
gi|312977780|ref|ZP_07789527.1| putative membrane protein [Lactobacillus crispatus CTV-05]
gi|260572698|gb|EEX29259.1| methionine aminopeptidase [Lactobacillus crispatus MV-3A-US]
gi|295030596|emb|CBL50075.1| Membrane protein [Lactobacillus crispatus ST1]
gi|310895519|gb|EFQ44586.1| putative membrane protein [Lactobacillus crispatus CTV-05]
Length = 307
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 6/209 (2%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMR-- 126
P+ ++K I I +L + G + + A + SN V A+R+ NR Y V VE++
Sbjct: 73 PDQVSKFIMPIINSLLKTTSTGYISFGIVFAVWSLSNMVNAIRLGENRLYGVHQVELKLS 132
Query: 127 --SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ TR I+F + L + I + V L ++ F N + I++ R
Sbjct: 133 MLNFLWTRTITFVFTGLMILVFTIATLALVFGQQVLNFLGPIFQLPLNEISKIFSYRYPV 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + L +++ LP K K I PGV T + W+ + LF+ Y+ F Y
Sbjct: 193 LILVMMLALWYLNYVLPNIKLKKRVIWPGVFVTVVGWLALSFLFSFYLHHFPITWENYGI 252
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + +++L + V F+ G +NA+++
Sbjct: 253 VGTFIIFMLWLNIAAVLFLFGVGVNAAIV 281
>gi|117927634|ref|YP_872185.1| putative ribonuclease BN [Acidothermus cellulolyticus 11B]
gi|117648097|gb|ABK52199.1| putative ribonuclease BN [Acidothermus cellulolyticus 11B]
Length = 300
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 119/283 (42%), Gaps = 25/283 (8%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGA 69
I A+ F + +A+ ++ L S FP + + G + + V V + G
Sbjct: 29 IFGGAVREFSDHRCTLLAAALAYHVLFSFFPLALVAVGIVGLVSSDPAVRNEVATRIVGI 88
Query: 70 WPEVIAKPITDEILQVLA--VPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEMR 126
P A D++ +L A+G LA ++S++GV ALR LN+A+ V R
Sbjct: 89 VPLNTAG--RDQLANLLTSIAGARGAIGFVGLAGLWWSASGVMGALRGGLNQAFDVTAKR 146
Query: 127 SWYITRLISFGYVLLASV--------TLVIMSFVFVA--IPLALAYVRKFFPALGNLLLI 176
++ + + VL A V T+++ F +A +P LA + G L +
Sbjct: 147 RFWRAKFLDLVLVLGAVVVVGVSFGVTILVGIFQHIAHRLPGVLADAGSWLVDTGGLGI- 205
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+L +F + ++ ++P S+I+ + PG + + F Y+ F
Sbjct: 206 --------ALLFIFTMCLLLYRYVPVQSSRIVDLWPGALVAAVGLEALQYGFAFYLSNFG 257
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y+ +Y L I+ L F+Y+ G F GAE+ Y R+
Sbjct: 258 HYNRVYGTLGGIVAFLFFVYVAGAVFFFGAEVADGYARYRLRR 300
>gi|72160655|ref|YP_288312.1| ribonuclease BN [Thermobifida fusca YX]
gi|71914387|gb|AAZ54289.1| ribonuclease BN [Thermobifida fusca YX]
Length = 333
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 5/258 (1%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
F E++ +A+ ++ A+LS+FP ++ +L G G T+ D + P+ +
Sbjct: 42 EFKEDNLTDLAAGLTYYAVLSIFPALLVLVSLLGLAG-QSATDTISDQLSAVAPDETVEI 100
Query: 78 ITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLIS 135
+T + + A A L + +LA A +S++ V A + N Y + E R ++ T +
Sbjct: 101 VTGVLTNLQANQATASLVGLLSLALAVWSASAYVAAFMRAANIVYDIREGRPFWKTLPVR 160
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
G LL +TLV +S + V + +A F G + +WN + ++ L + ++
Sbjct: 161 VGITLLL-LTLVAISALAVILSGGVAQWVGNFIGAGPTAVTLWNIVKWPVLVLLMMFMVS 219
Query: 196 V-HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
V + P K + PG I + W+ + F Y+ F+ Y+ Y LA+++ LV+
Sbjct: 220 VLYWAAPNVKRPFRWVSPGGIVAVLIWLGASAAFAFYVANFANYNRTYGSLAAVVIFLVW 279
Query: 255 LYMLGVFFILGAELNASM 272
L++ + +LG E NA +
Sbjct: 280 LWISNIAILLGIEYNAEI 297
>gi|225868869|ref|YP_002744817.1| ribonuclease BN-like family protein [Streptococcus equi subsp.
zooepidemicus]
gi|225702145|emb|CAW99833.1| ribonuclease BN-like family protein [Streptococcus equi subsp.
zooepidemicus]
Length = 312
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 15/269 (5%)
Query: 13 YDAIEHFVEEDGWAMASHISLSAL-------LSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
Y+ I+ F+ ++ + LSA+ L+ FP IV AN+ +L + ++ +
Sbjct: 16 YEPIQAFMRH---FQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--ISDLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I + + ++ + + P+ G+ I+ L + S + +L+ + N+AY E
Sbjct: 71 MKEQLPKDIYRSASSIVVNIFSKPSGGVLGIATLTGLWTMSRSLASLQKAFNKAYDASEH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + L+ LL L A+ + + + N+ + T
Sbjct: 131 RDFLLGHLVGLLTSLLILFLLTFALIFSTFSKAAIQVLDRHYHLNDNITTLFLFLIQPIT 190
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L +F+GL+ ++ LP K KI ILPG FT + + + +Y+V
Sbjct: 191 ILIIFVGLMLLYFLLPNIKIKKIRYILPGTFFTTFVMIFLSNMVGNYVVHNVERMVDIKT 250
Query: 245 LASIMTCLVFLY--MLGVFFILGAELNAS 271
S+M ++ L+ L I+GA NA+
Sbjct: 251 FGSVMVFIIMLWFIFLARILIMGAVFNAT 279
>gi|120435458|ref|YP_861144.1| ribonuclease BN [Gramella forsetii KT0803]
gi|117577608|emb|CAL66077.1| ribonuclease BN [Gramella forsetii KT0803]
Length = 307
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 36/264 (13%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID---VVFGAWPEVIAKPITDEIL- 83
AS I+ S +++FPF++F NL ++ T ID + F + + + P T +
Sbjct: 55 ASSIAFSFFMAIFPFLLFVLNLIPYI-------TFIDDFQIEFLLFMDTLLPPETSDFFG 107
Query: 84 ----QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + P GL +++ + + + +NG+ A+ +Y RS ++ G
Sbjct: 108 NIFEDIASTPRGGLLSVAFILSIFLMTNGINAIFTGFEFSYHTKTNRSIPRQYAVAVGVS 167
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG---LIFV 196
L+ ++ L+I V I A+ L NL L+ +G L +IG LI+
Sbjct: 168 LILALLLLISVVGAVYITYAI-------DDLSNLGLVNADG--VGARLINYIGFVILIYT 218
Query: 197 HLFL-------PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + A ++K S+ G +FT I ++ VLF+ YI FS Y+ +Y + +++
Sbjct: 219 AVAILYYFGTREARQAKFFSV--GALFTTILIMITTVLFSIYITNFSNYNELYGSIGALL 276
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
+ ++++ +LG ELNAS+I
Sbjct: 277 ILMFYIWLNSNMLLLGFELNASLI 300
>gi|17229562|ref|NP_486110.1| hypothetical protein all2070 [Nostoc sp. PCC 7120]
gi|17131161|dbj|BAB73769.1| all2070 [Nostoc sp. PCC 7120]
Length = 301
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 122/261 (46%), Gaps = 23/261 (8%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL-- 83
+ S I+ +A+LS+FP I+ GF F ++ D F +++ +E +
Sbjct: 32 GLGSEIAFNAMLSLFPAILAVLTAIGF-----FADSLQDT-FRQLAAQLSQVAPEEAMVL 85
Query: 84 -------QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE--MRSWYITRLI 134
++ GLF++S + A + +S V + ++ +++ + MR ++ ++L+
Sbjct: 86 IREFAGREIANSRNSGLFSLSFVIAIWTASGAVSTAMTAFDQIHQIPQEKMRPFWKSKLV 145
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI--- 191
S G + + LV+ SF+ L L V AL LL +W ++ LAL I
Sbjct: 146 SLGLTVGTILLLVLASFLVFISDLLLGMVVNENGAL-IFLLHLW--QLLRWPLALGIVAT 202
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
F++ + + I+PG I I W + + LF Y+ F Y+ +Y + +++
Sbjct: 203 AFSFIYRYGTSVWKPGTPIMPGAIVAAIFWAILSALFRLYVANFGNYNKVYGAVGTVIVL 262
Query: 252 LVFLYMLGVFFILGAELNASM 272
+++L+M ++G +LN ++
Sbjct: 263 MLWLWMSAAVLLIGDQLNVTV 283
>gi|55821532|ref|YP_139974.1| tRNA-processing ribonuclease BN [Streptococcus thermophilus LMG
18311]
gi|55737517|gb|AAV61159.1| tRNA-processing ribonuclease BN,putative [Streptococcus
thermophilus LMG 18311]
Length = 321
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP IV AN+ +L ++ + P+ P + + + + P+ L
Sbjct: 43 ILTVFPLIVIAANVFPYLNID--TTDLLKFMNEHLPKHFYAPAANVVQDIFSTPSGRLLG 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+++L + + +L+ ++++ Y E R +I+ +I L+ L +
Sbjct: 101 VASLTGFWTMIKSLSSLQKAIDKVYGASEHRDVFISHIIGGLLSLVILFLLTFALMLSTI 160
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGV 214
I L + + +P NL +I N ++ +F+G++ ++ LP K KI I+PG
Sbjct: 161 IQSVLRVINQTYPIGSNLTQLILNSIQPLSVAVVFLGMMVLYFILPNVKIRKIRYIMPGT 220
Query: 215 IFTWISWVVG--AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF-----ILGAE 267
IFT + V+G + LF Y++ + SIM +F++ML F I GA
Sbjct: 221 IFT--TLVIGYLSNLFGTYVIHTLSRLIDIKLFGSIM-IFIFIFMLWFIFLARILIFGAV 277
Query: 268 LNAS 271
NA+
Sbjct: 278 FNAT 281
>gi|312278870|gb|ADQ63527.1| Ribonuclease BN-like family enzyme [Streptococcus thermophilus
ND03]
Length = 315
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 13/244 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP IV AN+ +L ++ + P+ P + + + + P+ L
Sbjct: 37 ILTVFPLIVIAANVFPYLNID--TTDLLKFMNEHLPKHFYAPAANVVQDIFSTPSGRLLG 94
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+++L + + +L+ ++++ Y E R +I+ +I L+ L +
Sbjct: 95 VASLTGFWTMIKSLSSLQKAIDKVYGASEHRDVFISHIIGGLLSLVILFLLTFALMLSTI 154
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGV 214
I L + + +P NL +I N ++ +F+G++ ++ LP K KI I+PG
Sbjct: 155 IQSVLRVINQTYPIGSNLTQLILNSIQPLSVAVVFLGMMVLYFILPNVKIRKIRYIMPGT 214
Query: 215 IFTWISWVVG--AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF-----ILGAE 267
IFT + V+G + LF Y++ + SIM +F++ML F I GA
Sbjct: 215 IFT--TLVIGYLSNLFGTYVIHTLSRLIDIKLFGSIM-IFIFIFMLWFIFLARILIFGAV 271
Query: 268 LNAS 271
NA+
Sbjct: 272 FNAT 275
>gi|266625409|ref|ZP_06118344.1| YihY family protein [Clostridium hathewayi DSM 13479]
gi|288862689|gb|EFC94987.1| YihY family protein [Clostridium hathewayi DSM 13479]
Length = 121
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L L I F++ ++P K LPG +F+ + W+ + F+ Y FS +S MY L
Sbjct: 22 LLILTICFTFLYTYVPEKKQHFKKQLPGAVFSTLGWIAFSFAFSIYFNNFSNFSVMYGSL 81
Query: 246 ASIMTCLVFLYMLGVFFILGAELN 269
+I+ +++LY+ LGAE+N
Sbjct: 82 TAIVLLMLWLYVCICILFLGAEIN 105
>gi|89070971|ref|ZP_01158197.1| Ribonuclease BN [Oceanicola granulosus HTCC2516]
gi|89043478|gb|EAR49692.1| Ribonuclease BN [Oceanicola granulosus HTCC2516]
Length = 279
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
LL++FP I +AG + + + + G P+ A + + +V GL
Sbjct: 5 GLLALFPAITAMIAIAGLVMEPAQITEQLQALGGMLPQDAADILIGQAQEVAGSREGGLG 64
Query: 95 TISALA---AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
+ L A Y +S GV +L +N AY + R +I R + L + +++
Sbjct: 65 LAAVLGILLALYSASKGVSSLMEGINVAYDEEDQRG-FIKRTALTLALTLVLIVGIVLGL 123
Query: 152 V-FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG-LIFVHLFLPAAKSKIMS 209
V +P L V LG + I+ +A +L L +G ++ F P S M
Sbjct: 124 ASTVVLPAVLNVVD-----LGPVTEILIAAFRWALLLVLAVGGFALLYRFAPDRSSARMK 178
Query: 210 -ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ PG I I W+V V F Y F +Y+ + L ++ L++L++ ++GAE+
Sbjct: 179 WLTPGAIVGCILWIVATVGFAIYADNFGSYNESFGALGGVIVLLMWLWLSSYAVLMGAEI 238
Query: 269 NASM 272
N+ +
Sbjct: 239 NSEI 242
>gi|88812854|ref|ZP_01128099.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
gi|88789924|gb|EAR21046.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
Length = 322
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 22/255 (8%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
A+ ++ A+L++FP + ++ G + Q V I V G P+ A I + +V A
Sbjct: 46 AAGVAFYAMLALFPALAAIISIWGLVSDPQQVMQQIQSVSGMLPDQTAAIIKSQATKV-A 104
Query: 88 VPAKGLFTISALA----AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ G +++AL A Y +S G++AL LN Y E R G++ L
Sbjct: 105 SASGGAVSLAALGSVLLAVYSASKGMKALIEGLNMVYDEEEKR----------GFIKLNL 154
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLALFI----GLIFVH 197
V L++ + + + AL + LG+L L + I+ LF+ L ++
Sbjct: 155 VALILTIGLVLVMIAALGMIAAIPALLGSLGLGAVTKTAVIWLRWPLLFVVAIASLALIY 214
Query: 198 LFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P+ + + + G + + W+ G+ F+ Y F +Y+ Y L +++ L +L+
Sbjct: 215 RYAPSRTQPRWRWVSVGAVVATLLWIAGSFAFSFYTRNFGSYNETYGSLGAVIILLTWLW 274
Query: 257 MLGVFFILGAELNAS 271
+ +LGAELN+
Sbjct: 275 LSAFVVLLGAELNSE 289
>gi|256844588|ref|ZP_05550073.1| methionine aminopeptidase Map [Lactobacillus crispatus 125-2-CHN]
gi|293379910|ref|ZP_06626020.1| YihY family protein [Lactobacillus crispatus 214-1]
gi|256613129|gb|EEU18333.1| methionine aminopeptidase Map [Lactobacillus crispatus 125-2-CHN]
gi|290923530|gb|EFE00423.1| YihY family protein [Lactobacillus crispatus 214-1]
Length = 307
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 6/209 (2%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMR-- 126
P+ ++K I I +L + G + + A + SN V A+R+ NR Y V VE++
Sbjct: 73 PDQVSKFIMPIINSLLKTTSTGYISFGIVFAVWSLSNMVNAIRLGENRLYGVHQVELKLS 132
Query: 127 --SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ TR I+F + L + I + V L ++ F N + I++ R
Sbjct: 133 MLNFLWTRTITFIFTGLMILVFTIATLALVFGQQVLNFLGPIFQLPLNEISKIFSYRYPV 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + L +++ LP K K I PGV T + W+ + LF+ Y+ F Y
Sbjct: 193 LILVMMLALWYLNYVLPNIKLKKRVIWPGVFVTVVGWLALSFLFSFYLHHFPITWENYGI 252
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + +++L + V F+ G +NA+++
Sbjct: 253 VGTFIIFMLWLNIAAVLFLFGVGVNAAIV 281
>gi|113474045|ref|YP_720106.1| putative ribonuclease BN [Trichodesmium erythraeum IMS101]
gi|110165093|gb|ABG49633.1| putative ribonuclease BN [Trichodesmium erythraeum IMS101]
Length = 371
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 129/297 (43%), Gaps = 37/297 (12%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-----HQFVPTVI 63
F I + ++ +++ ++ SA+L++FP ++ G + Q +I
Sbjct: 69 FTTIKEVFNCVAKKRLSGLSAEMAYSAMLALFPALLTIIAAIGVFESLSSILFQMGSLLI 128
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV- 122
D+V P + I+ + ++ P K +F+ S + + + S+ + + +L+ ++V
Sbjct: 129 DIV----PNQVQDLISSAVYEIQRSPNKKIFSFSFILSIWLFSSVLSSAMAALDEIHQVP 184
Query: 123 -VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK---------------- 165
+ R ++ +L+S G + + L+I S + + L + + +
Sbjct: 185 LDKKRPFWKAKLVSLGLTIGTLILLIIASGLVLVSDLIVYMISRQSCLLEILPNCPSDQV 244
Query: 166 ----FFPALGNL-----LLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVI 215
F + N LL WN + L + I FV+ F P+ + K I+PG I
Sbjct: 245 ASCLFQKPINNCVLKLRLLETWNQLRWPITLGIVSIAFAFVYRFGPSYRRKGTPIIPGAI 304
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ W + LF Y+ F Y+ +Y + + + L++LY+ ++G++LN ++
Sbjct: 305 IAALMWAAASNLFRLYVFYFGNYNRIYGAIGTFIILLLWLYISSFVVLIGSQLNVTV 361
>gi|108804245|ref|YP_644182.1| ribonuclease BN [Rubrobacter xylanophilus DSM 9941]
gi|108765488|gb|ABG04370.1| ribonuclease BN, putative [Rubrobacter xylanophilus DSM 9941]
Length = 317
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT----ISALAAAYFSSNGVE 110
A V T+++ + P+ + + ++L + A+G FT IS L A + S +
Sbjct: 76 ATDLVRTMLENLSRVMPQSALRFVESQLLSITQSQAEGAFTAGAVISILLALWGVSGAMR 135
Query: 111 ALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-- 168
++ ++N Y V E R ++ IS +L++ ++ + + A+
Sbjct: 136 SVMEAMNVMYEVEENRPFWKVYGIS---ILISLAVAALLILALLLLVFGAAFGGGLASLV 192
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIF--VHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
LG + IW+ + +LA F+ F V+ F PA + + I G + ++ W++ ++
Sbjct: 193 GLGPVFAAIWSVAQW-PILACFVLFAFALVYYFAPAVEQRWRWISAGSVLAFVFWLIFSL 251
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
F+ Y+ F +Y+ Y LA I+ L+++Y + +LGAELN
Sbjct: 252 AFSLYVANFGSYNATYGSLAGIIIFLLYVYYSSLIVLLGAELN 294
>gi|297204191|ref|ZP_06921588.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197714118|gb|EDY58152.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 359
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 122/267 (45%), Gaps = 6/267 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ LLS+FP I+ ++ G G TV+ +
Sbjct: 53 VLRGSLREFKDDELTDRAAALTYYGLLSLFPAILVLVSMLGLTG-KSATDTVLKNLKQFT 111
Query: 71 PEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P IT + Q+ G + I L A +S++G V A S NR Y + E R
Sbjct: 112 PGSARDIITGAVEQLQGNAGVGSVMAIVGLVLAVWSASGYVAAFMRSANRVYDMPEGRPI 171
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G ++ V L ++S + V LA+ +G+ L +W + ++
Sbjct: 172 WKILPVRVGLTVVLMV-LAVVSALIVVFTGTLAHKAGTALGIGDTALTVWAIAKWPVLVV 230
Query: 189 LFIGLI-FVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +I ++ P A+ K I PG + + W++ + F Y+ F++Y+ Y +A
Sbjct: 231 LVTIMIALLYWATPNARVKGFRWITPGSVLALLIWLIASAGFAFYVANFASYNKTYGTMA 290
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
++ LV+L++ + +LG E +A +
Sbjct: 291 GVIVFLVWLWISNLAILLGLEFDAETV 317
>gi|146339131|ref|YP_001204179.1| putative ribonuclease [Bradyrhizobium sp. ORS278]
gi|146191937|emb|CAL75942.1| conserved hypothetical protein; putative membrane protein; putative
ribonuclease [Bradyrhizobium sp. ORS278]
Length = 353
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 16/271 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++Y E+ + A+A+ ++ LL++FP + + G + ++ + G
Sbjct: 60 DVLYRVYENVGDHRIVALAAGMTFYTLLAIFPALAAMVAIYGLFSDPAKITGHLEQLQGL 119
Query: 70 WPEVIAKPITDEILQVLAVPAK--GLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMR 126
P D++ +V A ++ G+ + +LA + +S+N +++L +LN YR E R
Sbjct: 120 MPGGAIDIARDQLTRVSAKGSQALGVTFLVSLAISLWSANAAMKSLFDTLNVVYREPERR 179
Query: 127 SW----YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ I+ L + G +L A + + V +P+ L YV +LLL I GR
Sbjct: 180 GFIKLNAISLLFTGGAILFALLAIA----AIVVVPVILQYV--GLSDAADLLLRI--GRW 231
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A + + +GL ++ + P + K I G W+ G+ LF+ Y F +++
Sbjct: 232 PAIFICVSLGLALIYRYGPDREEPKWRWISWGSALAAALWLGGSALFSWYAANFGSFNAT 291
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L + + + ++++ + ++GAEL+A +
Sbjct: 292 YGSLGAAVGFMTWIWISAIVILIGAELDAEL 322
>gi|326803368|ref|YP_004321186.1| YihY family protein [Aerococcus urinae ACS-120-V-Col10a]
gi|326651129|gb|AEA01312.1| YihY family protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 320
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 119/253 (47%), Gaps = 7/253 (2%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
A+ ++ ALL++FP ++ AN+ L ++ + P I + + L
Sbjct: 25 AAELAYYALLAIFPMLLLVANIIPLLPFDS--AQAVEWITAILPNEIEPLLIPTLKSYLD 82
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
+ G +I+ + + SS G AL+ LNR Y + ++ ITR+ SF L +++
Sbjct: 83 STSAGSLSINTILVIWSSSAGFSALQRVLNRVYGNPDHKNAVITRIASFLIAFLLVLSVG 142
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
+ S FV L + F P + + ++ + ++++FI ++F+++ +P +
Sbjct: 143 VFSLFFVFGETLLQIINNFVPLPLDFVELLLGLKWPVLLVSVFILMLFIYIVVPNQPMTL 202
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL-VFLYMLGVFFILGA 266
LPG + I ++ + LF Y V F+ S++ G + L ++LY+ G+ I+G
Sbjct: 203 KYALPGSVTAAIIVLLISSLFGVY-VQFAGGSSVQNGTIGVFIALMLYLYLNGMALIVGG 261
Query: 267 ELNASMIIYYWRK 279
+N IYY K
Sbjct: 262 LVNT---IYYRYK 271
>gi|312874248|ref|ZP_07734282.1| YihY family protein [Lactobacillus iners LEAF 2052A-d]
gi|311090318|gb|EFQ48728.1| YihY family protein [Lactobacillus iners LEAF 2052A-d]
Length = 306
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 118/251 (47%), Gaps = 24/251 (9%)
Query: 36 LLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
L S+FP I+ N+ L + + T ++V+F PE IA+ I + +L + G
Sbjct: 38 LFSIFPVIMIVGNMLPLLQINTSSIATYLNVIF---PEQIAQFILPIVKSLLHQQSNGSI 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WY--ITRLISFGYVLLASVTLVI 148
++ + A + S V ++RI++N+ Y V E WY +TR + +LL S+
Sbjct: 95 SLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTRTL----MLLLSI---F 147
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRI--YATMLALFIGLIF---VHLFLP 201
M ++F+ +A+ + LG L + W ++ Y L + + ++F ++ +P
Sbjct: 148 MIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILFNTYINYTIP 207
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K PG IFT I W + F Y+ F T Y + + + L++L + +
Sbjct: 208 NIGMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGTRWENYGIIGTFIIFLMWLNLAAIL 267
Query: 262 FILGAELNASM 272
F++G LNA++
Sbjct: 268 FLIGVCLNATI 278
>gi|116628245|ref|YP_820864.1| ribonuclease BN-like family protein [Streptococcus thermophilus
LMD-9]
gi|116101522|gb|ABJ66668.1| Ribonuclease BN-like family enzyme [Streptococcus thermophilus
LMD-9]
Length = 314
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 15/244 (6%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP IV AN+ +L ++ + P+ P + + + + P+ L
Sbjct: 43 ILTVFPLIVIAANVFPYLNID--TTDLLKFMNEHLPKHFYAPAANVVQDIFSTPSGRLLG 100
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+++L + + +L+ ++++ Y E R +I+ +I L+ L +
Sbjct: 101 VASLTGFWTMIKSLSSLQKAIDKVYGASEHRDVFISHIIGGLLSLVILFLLTFALMLSTI 160
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGV 214
I L + + +P NL +I N ++ +F+G++ ++ LP K KI I+PG
Sbjct: 161 IQSVLRIINQTYPIGSNLTQLILNSIQPLSVAVVFLGMMVLYFILPNVKIRKIRYIMPGT 220
Query: 215 IFTWISWVVG--AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF-----ILGAE 267
IFT + V+G + LF Y++ + SIM +F++ML F I GA
Sbjct: 221 IFT--TLVIGYLSNLFGTYVIHTLSRLVDIKLFGSIM---IFIFMLWFIFLARILIFGAI 275
Query: 268 LNAS 271
NA+
Sbjct: 276 FNAT 279
>gi|110637484|ref|YP_677691.1| hypothetical protein CHU_1074 [Cytophaga hutchinsonii ATCC 33406]
gi|110280165|gb|ABG58351.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 313
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 116/266 (43%), Gaps = 28/266 (10%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+D A I+ LS+FP I+F L ++ ++ + G P+ I +
Sbjct: 53 NDDINVRAKSITYDFFLSIFPGIIFLFTLIPYIPIPDLDKNILSAISGFLPQNIYVSVES 112
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ ++ +P GL + L A Y ++NG+ ++ + N Y+ + RS+ IS +
Sbjct: 113 TLTDIINIPRGGLLSFGFLFAFYAANNGIISVINTFNHCYKTTDDRSFIAKLGISISILF 172
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL--IFVHL 198
L + LV++ + + L L Y + NG ++ F+ +FV
Sbjct: 173 L--LFLVVVGGIVITWFLKLLYTN------------LENGFDVSSFQLYFVAFLRLFVMF 218
Query: 199 FLPAAKSKIMS-ILPGVIFTWISWVVGAVL-----------FTHYIVTFSTYSTMYAGLA 246
FL IM I P + W + +G+V F YI F++Y+ +Y +
Sbjct: 219 FLIIMSISIMYFIAPSIHKRWKFFSLGSVTASILCFVFNLGFGFYIEHFNSYNKVYGSIG 278
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
+++ L+ +++ + ++G ++NAS+
Sbjct: 279 ALIGFLLLIFVNILMLLVGFQINASL 304
>gi|307303467|ref|ZP_07583221.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
gi|306902858|gb|EFN33450.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
Length = 330
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 126/278 (45%), Gaps = 19/278 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ F VF I EE +A+ +S LLS+FP + ++ G + +
Sbjct: 34 MRDVFWRVFSEIG-------EERVMLIAAGVSFYLLLSLFPALGALVSIYGLVADPSEIG 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLN 117
T + ++ P I D++ + L F +S + + ++NG+ A ++N
Sbjct: 87 THVGILQALLPADSYGLIMDQLETLTTQKPSTLGIGFFVSLSISLWLAANGIAATFDAMN 146
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLL 175
AY E R + L+ + A + V + +P LAYV ++ L
Sbjct: 147 VAYGEREKRGFLSRTLLCLAFTFAALLFAVALIAAIGVVPAVLAYVWVDRWVE------L 200
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ R A +L + G I ++ F P+ ++K+ + G +F+ + W+ + LF++Y+
Sbjct: 201 VTRAARWPAVLLLVTFGTILIYRFGPSRERAKLRWLNWGAVFSTLFWLAASWLFSYYLEH 260
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F+ Y+ Y L ++ + ++++ + I+GA +NA +
Sbjct: 261 FANYNATYGALGALAGLMTWVWISVMILIIGALINAEL 298
>gi|300087710|ref|YP_003758232.1| ribonuclease BN [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527443|gb|ADJ25911.1| ribonuclease BN [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 295
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 124/271 (45%), Gaps = 25/271 (9%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGA 69
+I IE +D +A+ ++ A+LS+FP ++ ++AG FL + + D +
Sbjct: 25 VIVGTIEALGRDDASHLAAGVAYFAVLSLFPLLLGFISIAGLFLPSEAVQQAIFDFMETN 84
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEMRSW 128
P + ++ I + I ++A ++G+ I +L A ++ SSN A+ ++LNR+ V E +
Sbjct: 85 LP-IASEIIVENIDSIIA--SRGVIGIISLLALFWTSSNMFTAIAVALNRSCGVCERHPF 141
Query: 129 YITRLISFGYVLLASVTLV---IMSFVFVAIPLALAYVRKFFPALGN----LLLIIWNGR 181
YI + L A + ++ V IP A P +G+ +L +I G
Sbjct: 142 YIRKPRDMALSLAAGFLFLFSGVLPTVISLIPEA------HLPLVGSTTNVILFLIGAGL 195
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L L+ FLP + I PG + +++ F ++ F+ + +
Sbjct: 196 SFLVFLVLYS-------FLPTHRRPWQFIWPGALLGTVAFEGLRYFFIMFLSNFANFKLV 248
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y + S + ++++Y+ ++GAE N +
Sbjct: 249 YGTIGSAVALMIWIYLSAFILLIGAEFNGQL 279
>gi|325912154|ref|ZP_08174552.1| YihY family protein [Lactobacillus iners UPII 143-D]
gi|325476104|gb|EGC79272.1| YihY family protein [Lactobacillus iners UPII 143-D]
Length = 306
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 118/251 (47%), Gaps = 24/251 (9%)
Query: 36 LLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
L S+FP I+ N+ L + + T ++V+F PE IA+ I + +L + G
Sbjct: 38 LFSIFPVIMIVGNMLPLLQINTSSIATYLNVIF---PEQIAQFILPIVKSLLHQHSNGSI 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WY--ITRLISFGYVLLASVTLVI 148
++ + A + S V ++RI++N+ Y V E WY +TR + +LL S+
Sbjct: 95 SLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTRTL----MLLLSI---F 147
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRI--YATMLALFIGLIF---VHLFLP 201
M ++F+ +A+ + LG L + W ++ Y L + + ++F ++ +P
Sbjct: 148 MIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILFNTYINYTIP 207
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K PG IFT I W + F Y+ F T Y + + + L++L + +
Sbjct: 208 NIGMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGTRWENYGIIGTFIIFLMWLNLAAIL 267
Query: 262 FILGAELNASM 272
F++G LNA++
Sbjct: 268 FLIGVCLNATI 278
>gi|254476019|ref|ZP_05089405.1| ribonuclease BN [Ruegeria sp. R11]
gi|214030262|gb|EEB71097.1| ribonuclease BN [Ruegeria sp. R11]
Length = 309
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 24/273 (8%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+++ A + G +A+ ++ LLSVFP + L G PTVI AW
Sbjct: 43 LMWHAWQRMDRAKGGLLAAGVAFYGLLSVFPGMTAAVALFGMFAD----PTVI-TEQSAW 97
Query: 71 -----PEVIAKPITDEILQV-LAVPAK-GLFTISALAAAYFS-SNGVEALRISLNRAYRV 122
P A + +++ V + P + G I +++ A++S S +L LN Y
Sbjct: 98 LTRLLPPSAADLLNGQLVDVAMERPDRLGWAAILSISIAFWSASRAANSLMQGLNVIYNR 157
Query: 123 VEMRSW---YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
E R YI +LI ++ ++ LV+ V AIP ALA P L ++ ++
Sbjct: 158 AERRGMVMLYIRQLIITFAAIVGALFLVL---VVAAIPAALALFGDS-PLLSDIAQVV-- 211
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R ++ +G+ ++ F P + + I PG + WV G++ F++Y+ F +Y
Sbjct: 212 -RWPLMFVSGMVGISLLYRFGPDRRGEEWHRITPGAFVSCSLWVAGSIGFSYYVRVFGSY 270
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S + L+ ++ L ++++ + GA ++A
Sbjct: 271 SETFGTLSGVVLLLTWMWLSAFVVLYGAGIDAE 303
>gi|312872994|ref|ZP_07733054.1| YihY family protein [Lactobacillus iners LEAF 2062A-h1]
gi|311091516|gb|EFQ49900.1| YihY family protein [Lactobacillus iners LEAF 2062A-h1]
Length = 306
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 118/251 (47%), Gaps = 24/251 (9%)
Query: 36 LLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
L S+FP I+ N+ L + + T ++V+F PE IA+ I + +L + G
Sbjct: 38 LFSIFPVIMIVGNMLPLLQINTSSIATYLNVIF---PEQIAQFILPIVKSLLHQHSNGSI 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WY--ITRLISFGYVLLASVTLVI 148
++ + A + S V ++RI++N+ Y V E WY +TR + +LL S+
Sbjct: 95 SLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTRTL----MLLLSI---F 147
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRI--YATMLALFIGLIF---VHLFLP 201
M ++F+ +A+ + LG L + W ++ Y L + + ++F ++ +P
Sbjct: 148 MIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILFNTYINYTIP 207
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K PG IFT I W + F Y+ F T Y + + + L++L + +
Sbjct: 208 NIGMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGTRWENYGIIGTFIIFLMWLNLAAIL 267
Query: 262 FILGAELNASM 272
F++G LNA++
Sbjct: 268 FLIGVCLNATI 278
>gi|163755344|ref|ZP_02162464.1| hypothetical protein KAOT1_07988 [Kordia algicida OT-1]
gi|161324764|gb|EDP96093.1| hypothetical protein KAOT1_07988 [Kordia algicida OT-1]
Length = 315
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 130/286 (45%), Gaps = 24/286 (8%)
Query: 12 IYDAIEHFVEE--DG--WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
IYD +E ++ +G + A I+ S +++FP ++F NL ++ F + I +
Sbjct: 35 IYDLMEMYIVGIINGALTSRAGSIAFSFFMAIFPSLLFLLNLLPYVPIDGFQGSFIRAIT 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + + I+ ++ GL + + L + + +NGV A+ +Y +++ R
Sbjct: 95 SLLPDESGNFMNEIIVDIVKNKRGGLLSSTFLLSIFLMANGVSAIFAGFETSYYILKKRR 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT-- 185
++ L + G L I++ + ++ + L Y + + + + +I T
Sbjct: 155 FFQQYLYALGVGL-------ILALLLISTVIVLGYTEIYIVRISDFAVKTTGFKISQTNE 207
Query: 186 -----------MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ +++G ++ F + PG + T + V+ + LF YI
Sbjct: 208 FWITIAKFSFLIVMVYLGTAILYYFGTHQGRRAKFFSPGALLTTVLIVLTSYLFGIYIAN 267
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
FS Y+ +Y + +++ ++++++ +LG ELNAS+ + +K+
Sbjct: 268 FSQYNELYGSIGALLILMMYIWLNANILLLGFELNASLDMLRIKKE 313
>gi|217979693|ref|YP_002363840.1| ribonuclease BN [Methylocella silvestris BL2]
gi|217505069|gb|ACK52478.1| ribonuclease BN [Methylocella silvestris BL2]
Length = 360
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 117/268 (43%), Gaps = 29/268 (10%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ LL++FP + +L GF V ID++ G P + DE ++
Sbjct: 103 VAAGVTFYLLLAIFPAVSALVSLYGFFADRSGVGAQIDLLVGLLPAGGLDLLRDEATRIA 162
Query: 87 AVPAKGLFTISA-----LAAAYFSSN-GVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
G T+SA LA + +S+N G++ L ++N Y E RS+ S +
Sbjct: 163 T---SGQSTLSAVFLFGLAVSIWSANAGMKGLFEAMNVVYEEQENRSFIRLNAWSLAFTF 219
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
A + + V +P+ L YV L L W ++ +LAL I ++ +
Sbjct: 220 GALLFALAALGAIVLVPIILDYVGLERSGAAILSLARWPLLFFSLVLALAI----LYRYG 275
Query: 201 PAAKSKIMSILPGVIFTWISW---------VVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
P+ P + WI+W +V ++LF+ Y+ F +Y+ Y L + +
Sbjct: 276 PSRN-------PAPSWRWITWGSAAASALWLVASILFSWYVANFGSYNATYGSLGAAIGF 328
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++++ ++G ELN+ + RK
Sbjct: 329 MTWIWISITVVLVGGELNSQIERQAGRK 356
>gi|319939194|ref|ZP_08013557.1| methionine aminopeptidase Map [Streptococcus anginosus 1_2_62CV]
gi|319811590|gb|EFW07866.1| methionine aminopeptidase Map [Streptococcus anginosus 1_2_62CV]
Length = 302
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 126/270 (46%), Gaps = 42/270 (15%)
Query: 27 MASHISLSA-------LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKP 77
AS I L++ L+S+FP ++ N+ + + +F+ + DV+ + EV+AK
Sbjct: 22 QASEIDLTSIAVAYYLLISIFPLLLIVVNILPYFQIPIAEFLEAMEDVLPESLYEVVAKV 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL---- 133
+ +L P+ GL + S L+A + S + L+ + N+AY V + R RL
Sbjct: 82 TRN----LLTQPSSGLLSFSILSALWAFSQSMSFLQKAFNKAYGVAKDRGLISHRLFSLV 137
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
IS G L +++L++ F +++ L ++ ++ ++YA++ +
Sbjct: 138 ISLGLQFLFALSLLLTMFGRMSLRLLHSFWE-------------FDDQLYASLQRMTQPT 184
Query: 194 IFV---------HLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
I+ + FLP K KI +LPG IF + V LF+ Y+ T+ +
Sbjct: 185 IYTLLFLSLLMLYYFLPNVKIRKIRYVLPGTIFVVFTIGVLLNLFSVYLDTYVNHLMDVR 244
Query: 244 GLASIMTCLVFLY--MLGVFFILGAELNAS 271
+SI +V ++ ++ I+GA LNAS
Sbjct: 245 FFSSIFVVVVMIWFTLIAQIMIIGAILNAS 274
>gi|13476680|ref|NP_108249.1| hypothetical protein mll8068 [Mesorhizobium loti MAFF303099]
gi|14027441|dbj|BAB53710.1| mll8068 [Mesorhizobium loti MAFF303099]
Length = 353
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 9/195 (4%)
Query: 83 LQVLAVPAKGLFTIS---ALAAAYFSSN-GVEALRISLNRAYRVVEMRSWYITRLISFGY 138
LQ LA+ G I L A +SSN G++AL ++N AY E RS+ L+S +
Sbjct: 131 LQALAMQKPGALGIGFFIGLGIALWSSNSGMKALFDAMNIAYEEREKRSFITLNLMSILF 190
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+ A + +++ +P L Y + A L+ + R + A+ G+ ++
Sbjct: 191 TVGALLIGIVLLLTVGVVPALLRYF--YLDAWTETLVAV--SRWPILVAAMLTGISLLYR 246
Query: 199 FLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F P+ ++K + G + +W+ + LF+ Y+ F+ Y+ Y L +++ +++ ++
Sbjct: 247 FGPSRERAKWRWLSSGALIATAAWIAASWLFSFYLQHFANYNATYGSLGAVVGLMMWTWI 306
Query: 258 LGVFFILGAELNASM 272
+ I GA +NA M
Sbjct: 307 SVIILIAGAAINAEM 321
>gi|269929254|ref|YP_003321575.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
gi|269788611|gb|ACZ40753.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
Length = 313
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEMRSWY 129
PE+ + + +L L P G+F + L ++++GV ALR LNR + V RS+
Sbjct: 98 PELGLQEPVEGLLDDLGAPGGGVFGLIGLVGLAWTASGVFGALRRVLNRVFAVPSNRSFV 157
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL--GNLLLIIWNGRIY---- 183
R I LLA + + + + + L L VR F G L+ + W G ++
Sbjct: 158 HARAID----LLAMICVPTLLILSTLLTLGLRLVRTFASDYFDGLLIRVAW-GVVFLLVP 212
Query: 184 -ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
AT A+F+ ++ +P + + + G +F + + + F Y+ + T+Y
Sbjct: 213 LATSFAVFL---LLYRLVPNLRPEFADLWAGALFAAVGFELAKAGFGFYVTEVGDFQTLY 269
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L +T LVF+Y++ I G ++ WR +
Sbjct: 270 GPLGGAVTFLVFVYLVANVVIFG----GGIVAERWRDR 303
>gi|227877143|ref|ZP_03995217.1| possible ribonuclease BN [Lactobacillus crispatus JV-V01]
gi|256848992|ref|ZP_05554426.1| methionine aminopeptidase Map [Lactobacillus crispatus MV-1A-US]
gi|227863197|gb|EEJ70642.1| possible ribonuclease BN [Lactobacillus crispatus JV-V01]
gi|256714531|gb|EEU29518.1| methionine aminopeptidase Map [Lactobacillus crispatus MV-1A-US]
Length = 307
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 6/209 (2%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMR-- 126
P+ ++K I I +L + G + + A + SN V A+R+ N+ Y V VE++
Sbjct: 73 PDQVSKFIMPIINSLLKTTSTGYISFGIVFAVWSLSNMVNAIRLGENKLYGVHQVELKLS 132
Query: 127 --SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ TR I+F + L + I + V L ++ F N + I++ R
Sbjct: 133 MLNFLWTRTITFVFTGLMILVFTIATLALVFGQQVLNFLGPIFQLPLNEISKIFSYRYPV 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + L +++ LP K K I PGV T + W+ + LF+ Y+ F Y
Sbjct: 193 LILVMMLALWYLNYVLPNIKLKKRVIWPGVFVTVVGWLALSFLFSFYLHHFPITWENYGI 252
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + +++L + V F+ G +NA+++
Sbjct: 253 VGTFIIFMLWLNIAAVLFLFGVGVNAAIV 281
>gi|195977831|ref|YP_002123075.1| methionine aminopeptidase Map [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974536|gb|ACG62062.1| methionine aminopeptidase Map [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 599
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 5/239 (2%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+ FP IV AN+ +L + ++ ++ P+ I + + ++ + + P+ G+
Sbjct: 330 ILTAFPLIVIAANIFPYLNID--ISDLLRLMKEQLPKDIYRSASSIVVNIFSKPSGGVLG 387
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
I+ L + S + +L+ + N+AY E R + + L+ LL L
Sbjct: 388 IATLTGLWTMSRSLASLQKAFNKAYDASEHRDFLLGHLVGLLTSLLILFLLTFALIFSTF 447
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGV 214
A+ + + + N+ + T+L +FIGL+ ++ LP K KI ILPG
Sbjct: 448 SKAAIQVLDRHYHLNDNITTLFLFLIQPITILIIFIGLMLLYFLLPNIKIKKIRYILPGT 507
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFILGAELNAS 271
FT + + + +Y+V S+M ++ L+ L I+GA NA+
Sbjct: 508 FFTTFVMIFLSNMVGNYVVHNVERMVDIKTFGSVMVFIIMLWFIFLARILIMGAVFNAT 566
>gi|307706878|ref|ZP_07643680.1| ribonuclease BN-like family protein [Streptococcus mitis SK321]
gi|307617751|gb|EFN96916.1| ribonuclease BN-like family protein [Streptococcus mitis SK321]
Length = 286
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 17/246 (6%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + F+ V + + +V+AK IT +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVSNFLKVVNEFLPDTMYDVVAKIIT----EVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL----ISFGYVLLASVTLVIM 149
+ + L+A + S + L+ + N+AY V + R +L +SFG +L ++ L +
Sbjct: 94 LSFAVLSALWTFSKSMNFLQKAFNKAYGVAKNRGMISHQLMSLFVSFGLQILFALALFLS 153
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIM 208
F + + L +Y + P L + L + +YA + A+ L+ ++ FLP K +I
Sbjct: 154 VFGRMLLNLIKSYWKSDSP-LFDYLQDLTGPLVYALIFAI---LVMLYYFLPNVKVRRIR 209
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTY--STMYAGLASIMTCLVFLYMLGVFFILGA 266
S+LPG F ++ V+ +F+ Y+ + + + ++ + + ++ I+GA
Sbjct: 210 SVLPGSAFVMLTLVLLLNIFSVYVNNYVNHLVDVRFFSSVVVVVMMFWFILIAKILIVGA 269
Query: 267 ELNASM 272
+NAS+
Sbjct: 270 VINASV 275
>gi|283457804|ref|YP_003362396.1| hypothetical protein RMDY18_07440 [Rothia mucilaginosa DY-18]
gi|283133811|dbj|BAI64576.1| predicted membrane protein [Rothia mucilaginosa DY-18]
Length = 455
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 12/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGA 69
I+ AI F G MA+ ++ +LS+FP ++ +L G G + ++ +
Sbjct: 52 ILRRAIYKFGANGGTDMAAALTYFTVLSIFPALLAIVSLLGVFGHGEESAAVILAFLKDN 111
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P + + D I Q+ GL ++ + +A +S++G + +LN Y V E R
Sbjct: 112 APAQMYAILEDPIKQITGDHGAGLVLLTGILSALWSASGYTGSFGRALNTVYNVREGRPG 171
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI--IW-NGRIYAT 185
+I + ++ + + +V+M + + L V ++ P ++ LI IW NGR
Sbjct: 172 WILKPLNVFVTTVIIILVVLMMLMMLLGVTVLDMVGRYVPETVDMELIKLIWLNGRW--- 228
Query: 186 MLALFIGLIFVHLFLPAAKS----KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L LF+ + + L A + K + PG +GA FT Y FS Y+
Sbjct: 229 VLILFMAIALITLLYAATPNVRRYKAWRLSPGAALALFGMGLGAFGFTLYANNFSKYNAT 288
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y + ++ L+F++++ + GA L+A +++
Sbjct: 289 YGLIGGVIVMLLFIWIMNNMLLFGAHLDAEIML 321
>gi|126661844|ref|ZP_01732843.1| hypothetical protein FBBAL38_00795 [Flavobacteria bacterium BAL38]
gi|126625223|gb|EAZ95912.1| hypothetical protein FBBAL38_00795 [Flavobacteria bacterium BAL38]
Length = 307
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
AS I+ S +++FPF +F NL F+ F + V P + I + ++
Sbjct: 55 ASAIAFSFFMALFPFALFILNLIPFIPLENFQADFLKFVENGVPPNTYEAIEMILKDIMG 114
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
+GL + + + +NG+ A+ + + R ++ IS L+ S+ L+
Sbjct: 115 TSHQGLLSSGFILSILLMTNGINAILGGFEMSAHITITRGFFKQYFISLAISLVLSLILI 174
Query: 148 IMSFVFVAIPLALAYVRKF--FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
I AI + ++K + ++ +I W+ R +L + I ++ F S
Sbjct: 175 I---TVAAIVITEVMIQKINVHGYVADVSVIEWS-RYGFIILMILITTSILYKFGAKETS 230
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
KI I G + T I ++ + +F Y+ F+ Y+ +Y + +++ + ++++ + +LG
Sbjct: 231 KISFISYGAVLTTILIILSSYIFGVYVEKFARYNELYGSIGTLLVLMFYIWINCMVLLLG 290
Query: 266 AELNASM 272
ELNA++
Sbjct: 291 FELNATI 297
>gi|86142235|ref|ZP_01060745.1| hypothetical protein MED217_11334 [Leeuwenhoekiella blandensis
MED217]
gi|85830987|gb|EAQ49444.1| hypothetical protein MED217_11334 [Leeuwenhoekiella blandensis
MED217]
Length = 316
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 117/247 (47%), Gaps = 4/247 (1%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
AS I+ S +++FPF +F NL ++ + F + + P + +L + A
Sbjct: 55 ASAIAFSFFMALFPFFLFVLNLIPYVPINGFQSDFLSFINNLLPPQTQEFFDPILLDIAA 114
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
GL + + + A + +NGV A+ ++ + RS ++ G ++ ++ L+
Sbjct: 115 NQRGGLLSFTLIFAIFLMANGVNAIFTGFEYSFHSITNRSIVKQYAVALGVSIMLALLLL 174
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF--LPAAKS 205
++ + + + ++ +++ + L I G A ++ ++ + ++ F +
Sbjct: 175 LVVIAVLYLQITISELKRRGIVNEDNLWISQLGSYIALIVLIYTVVATLYYFGTKEGKDT 234
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ +SI G T ++V LF YI F+TY+ +Y + +++ +V++++ +LG
Sbjct: 235 RFLSI--GATLTTFLFIVTTYLFGVYINNFATYNQLYGSIGALLIMMVYIWLNANLLLLG 292
Query: 266 AELNASM 272
ELNAS+
Sbjct: 293 FELNASL 299
>gi|91978756|ref|YP_571415.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB5]
gi|91685212|gb|ABE41514.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB5]
Length = 384
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 24/259 (9%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
A+A+ ++ +LL++FP I + G + D + G P D++ +V
Sbjct: 106 ALAAGMTYYSLLAIFPAIAALVAVYGLFADPSTIARHSDQLAGFLPGGALDVAQDQLTRV 165
Query: 86 LAVPAK--GLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ A+ GL + L + +S+N +++L +LN Y E R + IS G+ +
Sbjct: 166 ASNGAQTLGLTFLIGLGISLWSANAAMKSLFDTLNVVYGEEEKRGFVKLNAISLGFTIGG 225
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ ++ V IP+ L +V + G+ LL GR A L L + L ++ + P+
Sbjct: 226 VLFVLAALGCIVMIPVILGFV--GMSSFGDRLLSA--GRWPAMYLVLSVALAVIYRYGPS 281
Query: 203 AKSKIMSILPGVIFTWISW---------VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ + WISW + + LF+ Y +F ++ Y L +++ +
Sbjct: 282 REA--------TPWRWISWGSATAAMVWLAASTLFSWYAASFGQFNETYGSLGAVVGFMT 333
Query: 254 FLYMLGVFFILGAELNASM 272
+L+M + +LGAE++A++
Sbjct: 334 WLWMSAIVILLGAEIDAAL 352
>gi|90418256|ref|ZP_01226168.1| putative Ribonuclease BN, possibly membrane-associated
[Aurantimonas manganoxydans SI85-9A1]
gi|90337928|gb|EAS51579.1| putative Ribonuclease BN, possibly membrane-associated
[Aurantimonas manganoxydans SI85-9A1]
Length = 420
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 23/189 (12%)
Query: 94 FTISALAAAYFSSN-GVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
F IS LA A +S+N G++AL ++N AY E RS+ L SF + L A V ++ +
Sbjct: 165 FAIS-LAIALWSANAGMKALFEAMNVAYDEAEKRSFVTLTLTSFVFTLGAIVAAILFIGL 223
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV---------HLFLPAA 203
+A+PLAL LL I + +A + G+ + H
Sbjct: 224 VIALPLALD------------LLGIGTDTKWLVSIASYAGIFLLVSFGIAALYHWGPSRT 271
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
++K I PG + T + VV ++LF+ Y+ F +Y+ Y L +++ + ++++ I
Sbjct: 272 RAKWRWITPGTVLTVVVIVVVSMLFSWYVANFGSYNATYGSLGALIGFMTWIWISTTILI 331
Query: 264 LGAELNASM 272
+G E+NA M
Sbjct: 332 VGGEVNAEM 340
>gi|332142226|ref|YP_004427964.1| putative ribonuclease protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552248|gb|AEA98966.1| putative ribonuclease protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 317
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 121/253 (47%), Gaps = 14/253 (5%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT----VIDVVFGAWPEVIAKPITDEI 82
+A+ ++ LL++FP + L G + + Q + + +++VV +I + +T+ I
Sbjct: 39 IAAGVAFYCLLAIFPLLGATIALYGLMVSPQELQSHMTFLVNVVPTDSRYIIEEQLTNLI 98
Query: 83 LQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
+ + G LFT+ + + + SS G AL + N Y E R ++ L +
Sbjct: 99 EKSNSTLGWGFLFTL--VLSLWSSSKGANALIKACNITYGESEGRGFFKGILARVTCTVF 156
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFL 200
+T+++ +P ++ ++ + + + W ML LF I L ++ +
Sbjct: 157 MILTVIVALACITILPESIQWLSGNTVSAKEAMWVTW-----PVMLGLFNIALSALYRYA 211
Query: 201 PAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
P + ++ + PG IF + WVV + F+ Y+ F +Y+ Y + I+ L++LY+
Sbjct: 212 PHRREAQWRWVTPGSIFATVLWVVASYGFSIYLNEFGSYNKTYGSVGGIIILLMWLYLSA 271
Query: 260 VFFILGAELNASM 272
++GAE+N+++
Sbjct: 272 YIILIGAEVNSAI 284
>gi|218528864|ref|YP_002419680.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|218521167|gb|ACK81752.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 388
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 131/275 (47%), Gaps = 23/275 (8%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI F ++ ++A+ ++ LLS+FP I G + + + + G
Sbjct: 95 WDIATRVYLEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLHG 154
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-FTI-SALAAAYFSSNG-VEALRISLNRAYRVVEM 125
PE + I +++ ++ + L FT ++L + +S+N ++A+ +LN Y E
Sbjct: 155 VLPESAIEIIGEQVKRIATKGSGALGFTFFTSLTLSLWSANAAMKAMFDALNVVYEEEEK 214
Query: 126 RS--WYITRLISFG-----YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
R+ W R ++F +++LA +++V++ VF F LG+ +I
Sbjct: 215 RNFFWLNVRSLTFTAGALLFIILALISIVVLPVVF------------NFLGLGDGARLIA 262
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
GR +L L GL ++ + P+ +++ + G + + W++ ++LF+ Y+ F
Sbjct: 263 MGRWPVLLLVLLGGLAVLYRYGPSRERARWRWVGAGSVVAGVLWLIASILFSWYVANFGN 322
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ Y L +++ + ++++ +LG E+NA +
Sbjct: 323 YNETYGSLGAVIGFMTWIWISATIVLLGGEINAEI 357
>gi|309808686|ref|ZP_07702577.1| YihY family protein [Lactobacillus iners LactinV 01V1-a]
gi|309810203|ref|ZP_07704048.1| YihY family protein [Lactobacillus iners SPIN 2503V10-D]
gi|312875636|ref|ZP_07735637.1| YihY family protein [Lactobacillus iners LEAF 2053A-b]
gi|315653664|ref|ZP_07906584.1| ribonuclease BN [Lactobacillus iners ATCC 55195]
gi|308168065|gb|EFO70192.1| YihY family protein [Lactobacillus iners LactinV 01V1-a]
gi|308169475|gb|EFO71523.1| YihY family protein [Lactobacillus iners SPIN 2503V10-D]
gi|311088890|gb|EFQ47333.1| YihY family protein [Lactobacillus iners LEAF 2053A-b]
gi|315489026|gb|EFU78668.1| ribonuclease BN [Lactobacillus iners ATCC 55195]
Length = 306
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 24/251 (9%)
Query: 36 LLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
L S+FP I+ N+ L + + T ++V+F PE IA+ I + +L + G
Sbjct: 38 LFSIFPVIMIVGNMLPLLQINTSSIATYLNVIF---PEQIAQFILPIVKSLLHQQSNGFI 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WY--ITRLISFGYVLLASVTLVI 148
++ + A + S V ++RI++N+ Y V E WY +TR + +LL S+
Sbjct: 95 SLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTRTL----MLLLSI---F 147
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRI--YATMLALFIGLIF---VHLFLP 201
M ++F+ +A+ + LG L + W ++ Y L + + ++F ++ +P
Sbjct: 148 MIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILFNTYINYTIP 207
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K PG IFT I W + F Y+ F Y + + + L++L + +
Sbjct: 208 NISMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFLMWLNLAAIL 267
Query: 262 FILGAELNASM 272
F++G LNA++
Sbjct: 268 FLIGVCLNATI 278
>gi|326334995|ref|ZP_08201195.1| YihY family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692800|gb|EGD34739.1| YihY family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 304
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 9/249 (3%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
AS IS S +++FPF++ NL ++ F + P D L + +
Sbjct: 56 ASAISYSFFVAIFPFLLVVLNLIPYIPIADFQDDFWVFIDNLLPPGTHDFFKDIFLDIAS 115
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
GL + + + + ++NG+ A+ + +Y V R IS G +L V L+
Sbjct: 116 KKRAGLLSTVFVLSIFLTTNGINAVFGGFDTSYHVHNTRGVVKQYFISMGVAMLL-VFLI 174
Query: 148 IMSFVFVAIPLALAYVRK--FFPAL-GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK 204
+ S V + L+ Y+ + FF L N L + +I+ + I H +A+
Sbjct: 175 LFS---VILWLSFEYISRMGFFETLEANRYLFLLAKKIFFIFVTYLSISILFHF--GSAE 229
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
I G + T + +++ F YI F+ Y+ +Y + +++ L+++++ +L
Sbjct: 230 RGIRFFSAGSLLTLVLFILTTYGFGIYIENFAQYNQLYGSIGALLIFLLYIWLNSTILLL 289
Query: 265 GAELNASMI 273
G ELNAS++
Sbjct: 290 GFELNASLL 298
>gi|300768369|ref|ZP_07078271.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308180130|ref|YP_003924258.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ST-III]
gi|300494047|gb|EFK29213.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308045621|gb|ADN98164.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ST-III]
Length = 309
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 20/274 (7%)
Query: 12 IYDAIEHFVEEDGWAMASH----ISLSALLSVFPFIVFGANL-AGF-LGAHQFVPTVIDV 65
I ++E + G A S+ ++ AL+S+ P I+ NL A F L + Q + +V
Sbjct: 10 ITKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKSGQILAYAQEV 69
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + + ++ L+ + +I L + +S + A+R SLN AY V +
Sbjct: 70 I----PSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAYGVTDA 125
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV-------RKFFPALGNLLLIIW 178
++ TR+I+F L + +V ++ F L L + R P N LL
Sbjct: 126 QNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQLL--- 182
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ T + +F+ + ++ F+P AK K+ I G + T I W+V + F YI F+
Sbjct: 183 ENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFAKR 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
T Y + S++ + +L G+ + G +NAS+
Sbjct: 243 ITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASV 276
>gi|164688039|ref|ZP_02212067.1| hypothetical protein CLOBAR_01684 [Clostridium bartlettii DSM
16795]
gi|164602452|gb|EDQ95917.1| hypothetical protein CLOBAR_01684 [Clostridium bartlettii DSM
16795]
Length = 303
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 24/180 (13%)
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV-----------IMSFVFV 154
S V++L +NR+Y V E RS++ IS + ++ + ++ I FVF
Sbjct: 111 SKAVKSLIRGINRSYGVNENRSFFKVLFISLIFSIMLLLLILISLVLLIGGEKIGIFVFD 170
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPG 213
I L K+F + IWN Y+ + I L+ ++ ++P K K+ +PG
Sbjct: 171 LIGLD-----KYF-------IYIWNILRYSVGILFVISILVILYTYMPNTKMKVRDSVPG 218
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + W++ ++ Y+ FS Y +Y L ++ + +LY+ + G+ELNA ++
Sbjct: 219 AVLSTFLWIIVTYGYSFYVNNFSNYDVIYGSLGGVIVLITWLYLSSWTILAGSELNARLL 278
>gi|296284818|ref|ZP_06862816.1| hypothetical protein CbatJ_14416 [Citromicrobium bathyomarinum
JL354]
Length = 260
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 105/265 (39%), Gaps = 19/265 (7%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D++ E++ +A+ +S A L++ P + L G + V ID +
Sbjct: 1 MLDLLKRTWRGASEDNAGLVAAGVSYYAFLAMVPLLAVCVLLYGLVATPDAVARDIDALG 60
Query: 68 GAWPEVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVE 124
P A I D++ V AKGL ALA A F + N ++ LN + V E
Sbjct: 61 RGLPPSAASLIGDQLQSVTEAKDNAKGLGLAVALAIALFGARNAARSIIGGLNVVFNVEE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + + I+ +V + VF ALA L +A
Sbjct: 121 DRGFLKSNAIAL---------VVTLGAVF-----ALALAGTAISLAAALPGAAAPVASFA 166
Query: 185 TM-LALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
M +A +G F++ F P S +LPG + WV LF Y+ F+ Y+ Y
Sbjct: 167 LMFIAGMLGAGFLYRFAPNRPDPPWSAVLPGAALFALVWVGATALFGSYVANFANYNATY 226
Query: 243 AGLASIMTCLVFLYMLGVFFILGAE 267
L +++ L + Y+ +LG E
Sbjct: 227 GSLGAVVILLTWFYLSAFVLLLGGE 251
>gi|218530643|ref|YP_002421459.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|218522946|gb|ACK83531.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 397
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 121/251 (48%), Gaps = 29/251 (11%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP----EVIAKPITDEILQVLAVPAK 91
LL++FP I ++ G + + I+ + G P +++A+ QV + K
Sbjct: 131 LLAIFPAIAALVSVYGLIADVSTINHQIEALRGVLPSGGVDIVAE-------QVKRLTEK 183
Query: 92 GLFTIS-----ALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
G T+ +A + +S+NG V+ + +LN Y E R ++ L+S + A +
Sbjct: 184 GDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQRGFFKLNLVSLAFTAGALLF 243
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+V+ VA+P+A+ +F G+ L L+ W I ++ L + +++ + P+
Sbjct: 244 VVLALAGIVAVPVAI----QFLGLSGDAWWLALLRWP--ILFVIVILMLAVLY--RYGPS 295
Query: 203 AKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ + + PG +F W+ G++LF+ Y+ F +Y Y L + + + ++++
Sbjct: 296 RDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSLGAAIGFMTWIWLSTTI 355
Query: 262 FILGAELNASM 272
+LGA+LNA +
Sbjct: 356 VLLGAQLNAEL 366
>gi|227510013|ref|ZP_03940062.1| ribonuclease BN [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190508|gb|EEI70575.1| ribonuclease BN [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 299
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 124/264 (46%), Gaps = 8/264 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + H+ + D A+ ++ +L+S+FP + G ++ H +++ V +P
Sbjct: 13 IQTLVSHYSQGDVSDSAAVLAFYSLMSIFPILFIGGSILNLFHIH--TGDIMEYVRPIFP 70
Query: 72 E---VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ V+ +P+ D L+ +I + + +S + A + S+N+AY V E ++
Sbjct: 71 DRIYVMLEPVIDSTLRS---GGTSQLSIGLIVTIWSASRAIAAFQRSINKAYGVAEDQTA 127
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R++SF ++LL V +V + F +++ +++ + + +TM+
Sbjct: 128 ISNRILSFLWMLLLIVVVVAVMIAFALSQFVFSWLSPILHIPQSIISFVSTVKWPSTMIL 187
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+++ L + +P AK K + G +FT + +V A F+ Y+ F+ Y + +
Sbjct: 188 VWLLLSVLFYIVPTAKVKFRYVWFGALFTTLGLMVLAQAFSIYVTFFAHRVDAYKTIGTF 247
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ + +L G+ +LG +NA++
Sbjct: 248 IVLMFWLDFSGLIMLLGGVINATI 271
>gi|332293231|ref|YP_004431840.1| ribonuclease BN [Krokinobacter diaphorus 4H-3-7-5]
gi|332171317|gb|AEE20572.1| ribonuclease BN [Krokinobacter diaphorus 4H-3-7-5]
Length = 315
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 21/258 (8%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP-EVIA-------KP 77
+ AS I+ S +++FP ++F NL ++ F D+ F A+ E+I KP
Sbjct: 55 SRASSIAYSFFMAIFPALLFLLNLVPYVPIENF-----DIKFMAFIYELIPAQSLDFFKP 109
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
I +I Q GL + + L A + ++NGV A+ ++ R+++ ++ G
Sbjct: 110 IIIDISQN---ERAGLASFAGLLALFLTANGVNAIFSGFEGSHYNEISRNFFRQYAVALG 166
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL---LLIIWNGRIYATMLALFIGLI 194
++ ++ LV V + L L +R+ ++ LL I M+ I +
Sbjct: 167 TSIILALLLVTTISVVIYFELLLNSLRERDFMSNDMDIALLSIGKNLFLIIMIYSVIATL 226
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ KS+ S PG + T I +++ LF YI F TY+ +Y + +++ +++
Sbjct: 227 YYFGTKEGRKSRFFS--PGALMTTILFMITTYLFGIYIDNFGTYNELYGSIGALLIMMLY 284
Query: 255 LYMLGVFFILGAELNASM 272
+++ +LG ELNA++
Sbjct: 285 IWLNSNLILLGYELNATL 302
>gi|54023610|ref|YP_117852.1| putative ribonuclease [Nocardia farcinica IFM 10152]
gi|54015118|dbj|BAD56488.1| putative ribonuclease [Nocardia farcinica IFM 10152]
Length = 326
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 16/273 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ + F ++ A+ ++ ++LSVFP I+ L LGA PT D +
Sbjct: 28 WGVLRRTVTEFRADNVTDWAAALTYYSVLSVFPGIIV---LTALLGA--LSPTATDELVT 82
Query: 69 AWPEVIAKPIT----DEILQVLAVPA-KGLFTISALAAAYFSSNG-VEALRISLNRAYRV 122
+ E+ T D I ++ + G + +A A ++++G + A + N Y V
Sbjct: 83 SIREIGPGSGTQLLVDAIEELRGASSLAGPMALFGVATALWTASGYIGAFMRAANAIYEV 142
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R + T + G + A V L+ ++ V V +A + LG + +W
Sbjct: 143 EEGRPLWKTVPVRVG-LTAAMVVLIAVTAVGVVATGGIARRVGDWLGLGPTAVAVWEVAK 201
Query: 183 YATMLALFIGLIFVHLF--LPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ +LA+ + L F L+ P A+ L PG + + WV+ + F Y+ F +Y+
Sbjct: 202 W-PVLAVLVSLAFALLYWVAPNARQPGFRWLSPGSVLAVLVWVLASAGFAFYVANFGSYN 260
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y L + LV++++ V +LGAE +A +
Sbjct: 261 KVYGSLGGVAVFLVWVWISNVAVLLGAEFDAEL 293
>gi|90418703|ref|ZP_01226614.1| possible membrane protein, ribonuclease [Aurantimonas manganoxydans
SI85-9A1]
gi|90336783|gb|EAS50488.1| possible membrane protein, ribonuclease [Aurantimonas manganoxydans
SI85-9A1]
Length = 396
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 125/255 (49%), Gaps = 36/255 (14%)
Query: 36 LLSVFP-FIVFGANLAGF------LGAH-----QFVPTVIDVVFGAWPEVIAKPITDEIL 83
LL++FP F VF +L GF +G H QF+PT A E++ + +
Sbjct: 107 LLALFPAFAVF-VSLYGFVADPVSIGEHIAFIGQFLPT-------AGTELLESQLARLVS 158
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
Q + + G F L A + ++NG++ L ++N AY E RS++ L++F + L A
Sbjct: 159 QDSSSLSLG-FVSGLLFALWSANNGIKTLFEAMNVAYGEREQRSFFKLNLVAFCFTLGA- 216
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV-----HL 198
+ + V + + V F L + I+ I A + GLI V +
Sbjct: 217 ---IFIGIVLIVTVGVVPVVMAVF-GLQSFSEIM----IAAMRWPVVFGLIVVAIAMIYR 268
Query: 199 FLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+ P+ + ++ ++ G + + W++ ++ F+ Y+ F+ Y+ MY L +++ ++++++
Sbjct: 269 YGPSRRRARWKWVVSGALLAAVVWLLASLGFSWYLQNFANYNAMYGSLGAVIGFMMWVWI 328
Query: 258 LGVFFILGAELNASM 272
+ FI+GAE+NA M
Sbjct: 329 SSLIFIIGAEINAEM 343
>gi|227512948|ref|ZP_03942997.1| ribonuclease BN [Lactobacillus buchneri ATCC 11577]
gi|227523075|ref|ZP_03953124.1| ribonuclease BN [Lactobacillus hilgardii ATCC 8290]
gi|227083807|gb|EEI19119.1| ribonuclease BN [Lactobacillus buchneri ATCC 11577]
gi|227089756|gb|EEI25068.1| ribonuclease BN [Lactobacillus hilgardii ATCC 8290]
Length = 299
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 124/264 (46%), Gaps = 8/264 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + H+ + D A+ ++ +L+S+FP + G ++ H +++ V +P
Sbjct: 13 IQTLVSHYSQGDVSDSAAVLAFYSLMSIFPILFIGGSILNLFQIH--TGDIMEYVRPIFP 70
Query: 72 E---VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ V+ +P+ D L+ +I + + +S + A + S+N+AY V E ++
Sbjct: 71 DRIYVMLEPVIDSTLRS---GGTSQLSIGLIVTIWSASRAIAAFQRSINKAYGVAEDQTA 127
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R++SF ++LL V +V + F +++ +++ + + +TM+
Sbjct: 128 ISNRILSFLWMLLLIVVVVAVMIAFALSQFVFSWLSPILHIPQSIISFVSTVKWPSTMIL 187
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+++ L + +P AK K + G +FT + ++ A F+ Y+ F+ Y + +
Sbjct: 188 VWLLLSVLFYIVPTAKVKFRYVWFGALFTTLGLMILAQAFSIYVTFFAHRVDAYKTIGTF 247
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ + +L G+ +LG +NA++
Sbjct: 248 IVLMFWLDFSGLIMLLGGVINATI 271
>gi|254561610|ref|YP_003068705.1| ribonuclease BN family protein [Methylobacterium extorquens DM4]
gi|254268888|emb|CAX24849.1| Ribonuclease BN family protein [Methylobacterium extorquens DM4]
Length = 397
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 121/251 (48%), Gaps = 29/251 (11%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP----EVIAKPITDEILQVLAVPAK 91
LL++FP I ++ G + + I+ + G P +++A+ QV + K
Sbjct: 131 LLAIFPAIAALVSVYGLIADVSTINHQIEALRGVLPSGGVDIVAE-------QVKRLTEK 183
Query: 92 GLFTIS-----ALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
G T+ +A + +S+NG V+ + +LN Y E R ++ L+S + A +
Sbjct: 184 GDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQRGFFKLNLVSLAFTAGALLF 243
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+V+ VA+P+A+ +F G+ L L+ W I ++ L + +++ + P+
Sbjct: 244 VVLALAGIVAVPVAI----QFLGLSGDAWWLALLRWP--ILFVIVILMLAVLY--RYGPS 295
Query: 203 AKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ + + PG +F W+ G++LF+ Y+ F +Y Y L + + + ++++
Sbjct: 296 RDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSLGAAIGFMTWIWLSTTI 355
Query: 262 FILGAELNASM 272
+LGA+LNA +
Sbjct: 356 VLLGAQLNAEL 366
>gi|240139015|ref|YP_002963490.1| Ribonuclease BN family protein [Methylobacterium extorquens AM1]
gi|240008987|gb|ACS40213.1| Ribonuclease BN family protein [Methylobacterium extorquens AM1]
Length = 397
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 118/244 (48%), Gaps = 15/244 (6%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAK--GL 93
LL++FP I ++ G + + I+ + G P + +++ ++ GL
Sbjct: 131 LLAIFPAIAALVSVYGLIADVSTINHQIEALRGVLPSGGVDIVAEQVKRLTEKGDTTLGL 190
Query: 94 FTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
+ +A + +S+NG V+ + +LN Y E R ++ L+S + A + +V+
Sbjct: 191 TALIGIALSVWSANGGVKHVFDALNLVYNEREQRGFFKLNLVSLAFTAGALLFVVLALAG 250
Query: 153 FVAIPLALAYVRKFFPALGN---LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIM 208
VA+P+A+ +F G+ L L+ W I ++ L + +++ + P+ + +
Sbjct: 251 IVAVPVAI----QFLGLSGDAWWLALLRWP--ILFVIVILMLAVLY--RYGPSRDAPRWR 302
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ PG +F W+ G++LF+ Y+ F +Y Y L + + + ++++ +LGA+L
Sbjct: 303 WVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSLGAAIGFMTWIWLSTTIVLLGAQL 362
Query: 269 NASM 272
NA +
Sbjct: 363 NAEL 366
>gi|28377948|ref|NP_784840.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28270782|emb|CAD63687.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 306
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 20/274 (7%)
Query: 12 IYDAIEHFVEEDGWAMASH----ISLSALLSVFPFIVFGANL-AGF-LGAHQFVPTVIDV 65
I ++E + G A S+ ++ AL+S+ P I+ NL A F L + Q + +V
Sbjct: 10 IAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKSGQILAYAQEV 69
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + + ++ L+ + +I L + +S + A+R SLN AY V +
Sbjct: 70 I----PSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAYGVTDA 125
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV-------RKFFPALGNLLLIIW 178
++ TR+I+F L + +V ++ F L L + R P N LL
Sbjct: 126 QNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQLL--- 182
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ T + +F+ + ++ F+P AK K+ I G + T I W+V + F YI F+
Sbjct: 183 ENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFAKR 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
T Y + S++ + +L G+ + G +NAS+
Sbjct: 243 ITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASV 276
>gi|254556183|ref|YP_003062600.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|254045110|gb|ACT61903.1| integral membrane protein [Lactobacillus plantarum JDM1]
Length = 309
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 20/274 (7%)
Query: 12 IYDAIEHFVEEDGWAMASH----ISLSALLSVFPFIVFGANL-AGF-LGAHQFVPTVIDV 65
I ++E + G A S+ ++ AL+S+ P I+ NL A F L + Q + +V
Sbjct: 10 IAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKSGQILAYAQEV 69
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + + ++ L+ + +I L + +S + A+R SLN AY V +
Sbjct: 70 I----PSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAYGVTDA 125
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV-------RKFFPALGNLLLIIW 178
++ TR+I+F L + +V ++ F L L + R P N LL
Sbjct: 126 QNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQLL--- 182
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ T + +F+ + ++ F+P AK K+ I G + T I W+V + F YI F+
Sbjct: 183 ENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFAKR 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
T Y + S++ + +L G+ + G +NAS+
Sbjct: 243 ITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASV 276
>gi|254504096|ref|ZP_05116247.1| YihY family protein [Labrenzia alexandrii DFL-11]
gi|222440167|gb|EEE46846.1| YihY family protein [Labrenzia alexandrii DFL-11]
Length = 305
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR-----KFFPALGNL 173
AYR E R + L + G + A + ++ F+A+P+AL+ + +F L
Sbjct: 122 AYREEEDRPVWEFHLTALGLTIAALLIGLVAVIAFLALPVALSLLPLSGSSEFIARLLRW 181
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYI 232
L+I +A+ GL + F P+ + +K + G I + W+ G++LFT Y+
Sbjct: 182 PLLI---------VAVITGLSITYRFAPSRRQAKARWVTVGAIAGALMWIAGSLLFTTYV 232
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ Y ++ L+SI+ L++ + V I GAELNA +
Sbjct: 233 EKVANYEEVHGALSSIVVLLLWFWFSAVVAIFGAELNAEL 272
>gi|188581649|ref|YP_001925094.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179345147|gb|ACB80559.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 396
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 93/183 (50%), Gaps = 7/183 (3%)
Query: 92 GLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
GL + +A + +S+NG V+ + +LN Y E R ++ L+S + A + +VI
Sbjct: 188 GLTALFGIALSVWSANGGVKHVFDALNLVYNEREQRGFFKLNLVSLAFTAGALLFIVIAL 247
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMS 209
VA+P+A+ ++ A L L+ W A + + + L ++ + P+ + +
Sbjct: 248 AGIVAVPVAIQFLGLSSDAWW-LALLRWP----ALFVVVILMLAVLYRYGPSRDAPRWRW 302
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ PG +F W+ G++LF+ Y+ F +Y Y L + + + ++++ +LGA+LN
Sbjct: 303 VTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSLGAAIGFMTWIWLSTTIVLLGAQLN 362
Query: 270 ASM 272
A +
Sbjct: 363 AEL 365
>gi|332308360|ref|YP_004436211.1| ribonuclease BN [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175689|gb|AEE24943.1| ribonuclease BN [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 318
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 18/273 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA----HQFVPTVID 64
+DI+ ++ ++++ +A+ + LL++FP + ++ G + + Q + ++I
Sbjct: 21 WDILRRTVKKMLDDNLSLIAAGVGFYFLLAIFPMLAAFVSVYGLVVSPDELQQHLNSLIG 80
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
VV E+I K I++ I+ S L A + +S G +A+ + N Y E
Sbjct: 81 VVPAQGREIIQKQISN-IINKSQAELSASVVFSTLFAVWSASKGAQAMVTASNITYDQRE 139
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRI 182
R + ++ VL S LV+ + L + + + L LI W
Sbjct: 140 KRG--LIMMLVMRVVLTLSAVLVLAGALLAIALLPILLNQIGLKEHSSFLVKLITW---- 193
Query: 183 YATMLALFIGLIFVHLFL---PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
LA+ L + + +K + PG I ++WV+ +V F++Y+ F Y
Sbjct: 194 --PFLAIVFNLALASFYRYGPHRSSAKWRWVTPGSILASVTWVMFSVGFSYYLGQFGQYD 251
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L S++ L++ Y+ +LGAE NA+M
Sbjct: 252 KTYGSLGSVVVLLMWFYLTAFIILLGAEFNAAM 284
>gi|110677503|ref|YP_680510.1| ribonuclease BN, putative [Roseobacter denitrificans OCh 114]
gi|109453619|gb|ABG29824.1| ribonuclease BN, putative [Roseobacter denitrificans OCh 114]
Length = 306
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 122/257 (47%), Gaps = 23/257 (8%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFV--PTVIDVVFGAWPEVIAKPITD---- 80
+A+ ++ ++LS+FP LA + + P V+ V E++ + + D
Sbjct: 29 IAAGVAFYSMLSIFP------ALAALIAVLSLIADPEVVVVQLAELQELMPEDVYDILNA 82
Query: 81 EILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+I+ +++ + L +S + A + + GV A+ LN Y +W +
Sbjct: 83 QIVGLVSTSSDTLGWTGLVSVIVALWSARAGVGAMMHGLNVVYATDSRGTWR-----HYL 137
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA-LFIGLIFV 196
+L +V+LV + + + + L +A V F ALG +I + + +A +F G+ +
Sbjct: 138 RAVLLTVSLVAIGIIAL-LALVVAPVILAFLALGGFTSVIIDLLRWGVGIAVIFAGIGLL 196
Query: 197 HLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ F P + I + PG +F +SW ++ F++Y+ F Y+ +Y + +++ LV+L
Sbjct: 197 YRFGPNRRPAITRFVTPGSVFAAVSWAALSIAFSYYVAHFGNYNEVYGSIGAVIAMLVWL 256
Query: 256 YMLGVFFILGAELNASM 272
++ + GA LNA +
Sbjct: 257 WISSFLVLFGAALNAEI 273
>gi|238063813|ref|ZP_04608522.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
gi|237885624|gb|EEP74452.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
Length = 340
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 26/272 (9%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWPEVIA 75
+FV+++ A+ ++ +L++FP + L G + + V TVID+ EV A
Sbjct: 53 RNFVKDNCADWAAALTYYGVLALFPSAIVVVALVGLVSDGERTVDTVIDLAR----EVGA 108
Query: 76 KPITDEILQVLAVPA--------KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ V AV K L + L A + +S + A + N Y V E R
Sbjct: 109 GSVVGNDGFVSAVRGVVDQQSGTKALLSFGLLGALWSASGFIGAFTRASNAIYGVQEGRP 168
Query: 128 WYITRLISFGYVLLASVTLVIMSFV----FVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + G LA+VTLV+++ V V+ P+ A V + A G L +W G
Sbjct: 169 VWKLRPLQIG---LAAVTLVLLAVVATGLIVSGPVTDA-VGELVGA-GGLARTVW-GVAK 222
Query: 184 ATMLALFIGLIFVHLFLPAA---KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+LA+ + ++ LF A + + + PG +SW + + F Y+ F +Y
Sbjct: 223 WPVLAMVMMVLLSLLFWIAPNVRQPRFRWLTPGGAVALVSWALASFGFGLYVANFGSYDV 282
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L +++ LV+LY+ +LG ++NA +
Sbjct: 283 TYGSLGAVIAFLVWLYLSNSALMLGVQINAEL 314
>gi|163851892|ref|YP_001639935.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|163663497|gb|ABY30864.1| ribonuclease BN [Methylobacterium extorquens PA1]
Length = 397
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 121/251 (48%), Gaps = 29/251 (11%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP----EVIAKPITDEILQVLAVPAK 91
LL++FP I ++ G + + I+ + G P +++A+ QV + K
Sbjct: 131 LLAIFPAIAALVSVYGLIADVSTINHQIEALRGVLPSGGVDIVAE-------QVKRLTEK 183
Query: 92 GLFTIS-----ALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
G T+ +A + +S+NG V+ + +LN Y E R ++ L+S + A +
Sbjct: 184 GDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQRGFFKLNLVSLAFTAGALLF 243
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+V+ VA+P+A+ +F G+ L L+ W I ++ L + +++ + P+
Sbjct: 244 VVLALAGIVAVPVAI----QFLGLSGDAWWLALLRWP--ILFVIVILMLAVLY--RYGPS 295
Query: 203 AKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ + + PG +F W+ G++LF+ Y+ F +Y Y L + + + ++++
Sbjct: 296 RDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSLGAAIGFMTWIWLSTTI 355
Query: 262 FILGAELNASM 272
+LGA+LNA +
Sbjct: 356 VLLGAQLNAEL 366
>gi|77361434|ref|YP_341009.1| ribonuclease protein [Pseudoalteromonas haloplanktis TAC125]
gi|76876345|emb|CAI87567.1| putative ribonuclease protein [Pseudoalteromonas haloplanktis
TAC125]
Length = 319
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 105 SSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR 164
SS G +AL + N +Y+ E RS++ +L+ F + + ++ + I + + + I
Sbjct: 121 SSKGSQALITACNISYQEYEKRSFFKAQLVRFLFSI-GAIVVAIFALLIIGI-------- 171
Query: 165 KFFPALGNLLLIIWNGRIYATMLA-------LFIGLIFVHLFLPAAK-SKIMSILPGVIF 216
P + NL+ + N + T ++ L+ ++ + P K +K I G +
Sbjct: 172 --LPVVLNLVGLKENIDLLITFISWPLLAFTFNFALVLLYRYAPHRKPAKWRWITLGSVI 229
Query: 217 TWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
I W+V ++ F+ Y+ F++Y+ Y L ++ L++LY+ ILGA +NA+
Sbjct: 230 ATILWIVASIGFSFYVSKFASYNETYGSLGGVVIMLMWLYISAYIVILGATINAA 284
>gi|220921071|ref|YP_002496372.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
gi|219945677|gb|ACL56069.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
Length = 386
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 127/271 (46%), Gaps = 12/271 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++Y F ++ ++A+ ++ LL++FP I +L G + + I ++ G
Sbjct: 89 DVLYRVYLEFQKDRVLSVAAGVTFYTLLAMFPAIAALVSLYGLIADPATINDHIALLQGV 148
Query: 70 WPEVIAKPITDEILQVLA--VPAKGLFTISALAAAYFSSN-GVEALRISLNRAYRVVEMR 126
P I +++ ++ + GL + LA + +S+N GV+A+ +LN Y E R
Sbjct: 149 LPSGALDIIGEQVKRISSKGGTTLGLTFFTTLALSLWSANAGVKAIFDALNIVYEEEEKR 208
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF----FPALGNLLLIIWNGRI 182
S+ L S + L + +V+ V +P+ L ++ F P + L+ W
Sbjct: 209 SFIKLNLQSLTFTLGGLLFVVVALSGIVVLPVILNFIGNFGISISPKAWYIALLRWP--- 265
Query: 183 YATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L L ++ + P+ + K + PG + + W+VG++ F+ Y+ F +Y+
Sbjct: 266 -LLLAILLFALALLYRYGPSRDEPKWRWVTPGSLIAGVVWLVGSIAFSWYVAHFGSYNET 324
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L + + + ++++ +LG E+NA M
Sbjct: 325 YGSLGAAIGFMTWIWISATIVLLGGEINAEM 355
>gi|239983428|ref|ZP_04705952.1| ribonuclease BN family membrane protein [Streptomyces albus J1074]
Length = 297
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
L + LAA + +S V A S N Y + E R + + G +A V + + S +
Sbjct: 84 LAVVGVLAALWSASGYVGAFIRSSNAVYDMPEGRPVWKVLPVRVG-TTVALVVMAVGSAL 142
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS--- 209
V LA +G+ L +W+ + +L L IG+I + LF A +K
Sbjct: 143 IVVFTGDLARRAGSLLGIGDTALTVWSIAKWPVLLLLVIGMIAL-LFWAAPNTKGPGFRW 201
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ PG + W++ + F Y+ F +Y+ Y LA ++ LV+L++ + +LG E +
Sbjct: 202 VTPGSFLALVIWLLASAGFAVYVANFGSYNKTYGALAGVVVFLVWLWISNIAILLGLEFD 261
Query: 270 ASM 272
A +
Sbjct: 262 AEL 264
>gi|259500503|ref|ZP_05743405.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
gi|302191192|ref|ZP_07267446.1| hypothetical protein LineA_04212 [Lactobacillus iners AB-1]
gi|309805277|ref|ZP_07699329.1| YihY family protein [Lactobacillus iners LactinV 09V1-c]
gi|309806429|ref|ZP_07700437.1| YihY family protein [Lactobacillus iners LactinV 03V1-b]
gi|325912603|ref|ZP_08174986.1| YihY family protein [Lactobacillus iners UPII 60-B]
gi|259167887|gb|EEW52382.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
gi|308165511|gb|EFO67742.1| YihY family protein [Lactobacillus iners LactinV 09V1-c]
gi|308167182|gb|EFO69353.1| YihY family protein [Lactobacillus iners LactinV 03V1-b]
gi|325478024|gb|EGC81153.1| YihY family protein [Lactobacillus iners UPII 60-B]
Length = 306
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 24/251 (9%)
Query: 36 LLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
L S+FP I+ N+ L + + T ++V+F PE IA+ I + +L + G
Sbjct: 38 LFSIFPVIMIVGNMLPLLQINTSSIATYLNVIF---PEQIAQFILPIVKSLLHQQSNGSI 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WY--ITRLISFGYVLLASVTLVI 148
++ + A + S V ++RI++N+ Y V E WY +TR + +LL S+
Sbjct: 95 SLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTRTL----MLLLSI---F 147
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRI--YATMLALFIGLIF---VHLFLP 201
M ++F+ +A+ + LG L + W ++ Y L + + ++F ++ +P
Sbjct: 148 MIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILFNTYINYTIP 207
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K PG IFT I W + F Y+ F Y + + + L++L + +
Sbjct: 208 NISMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFLMWLNLAAIL 267
Query: 262 FILGAELNASM 272
F++G LNA++
Sbjct: 268 FLIGVCLNATI 278
>gi|282866832|ref|ZP_06275868.1| ribonuclease BN [Streptomyces sp. ACTE]
gi|282558324|gb|EFB63890.1| ribonuclease BN [Streptomyces sp. ACTE]
Length = 360
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 123/272 (45%), Gaps = 18/272 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + F +++ A+ ++ +LS+FP ++ +L G G V+D +
Sbjct: 62 VLRRTVREFADDELADRAAALTYYGVLSLFPALLVLVSLLGIAG-ESATQQVMDNLRKLA 120
Query: 71 PEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS- 127
P + ++D + Q+ G L + L A +S++G + A S N Y + E R
Sbjct: 121 PGPVRDILSDAVEQLQGNGGTGSLMAVLGLVLALWSASGYIAAFIRSSNAVYDIPEGRPV 180
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAI-----PLALAYVRKFFPALGNLLLIIWNGRI 182
W + L L +VTL++++ V I PLA +G+ L W+
Sbjct: 181 WKVLPL-----RLALTVTLMVLAVVSALIVVFTGPLAQRAGSAL--GVGDTALTAWSIAK 233
Query: 183 YATMLALFIGLI-FVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ L +I ++ P A+ + + PG + W++ + F Y+ FS+Y+
Sbjct: 234 WPVLVLLVTVMIALLYWAAPNARGRGFKWVTPGSFLALLLWMIASAGFALYVAYFSSYNK 293
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y LA ++ LV+L++ + +LG E +A M
Sbjct: 294 TYGALAGVIVFLVWLWITNLAILLGLEFDAEM 325
>gi|322387480|ref|ZP_08061090.1| ribonuclease BN [Streptococcus infantis ATCC 700779]
gi|321142009|gb|EFX37504.1| ribonuclease BN [Streptococcus infantis ATCC 700779]
Length = 287
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + F+ T+ + + P+ I + + + +VL P+ GL
Sbjct: 38 LISIFPLLMIVVNILPYFQIPISNFLLTIKEFL----PDTIYEVVAKIVREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ + L+A + S ++ L+ + N+AY V + R ++ L+SFG +L ++ L +
Sbjct: 94 LSFAILSALWTFSKSMDFLQKAFNKAYGVAKNRGIISHQLMSLLVSFGLQILFALALFLS 153
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIM 208
F + + L Y + AL + L IYA LF +I ++ FLP K SKI
Sbjct: 154 MFGHMLLDLLKNYWKSE-SALFSYLQDFTGPLIYAF---LFATVIMLYYFLPNVKVSKIR 209
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFILGA 266
++PG +F ++ + +F Y + Y +SI+ ++ + ++ I+GA
Sbjct: 210 YVIPGSLFVLVTTIALLNIFAAYFNNYVNYLVDVRFFSSIVVVVMMFWFIIIAKILIIGA 269
Query: 267 ELNAS 271
LNAS
Sbjct: 270 VLNAS 274
>gi|256394381|ref|YP_003115945.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256360607|gb|ACU74104.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 331
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 9/246 (3%)
Query: 37 LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG-LFT 95
L+VFP ++ ++ G LG V TV+D V P + + I QV A G
Sbjct: 81 LAVFPTLLLAISVLGLLGTST-VNTVLDNVQKLAPGSVHDVLRTAITQVRASGGTGGTLA 139
Query: 96 ISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV 154
I+ + A +S++G V A + N Y V E R + T + G +L VT ++ S V V
Sbjct: 140 IAGVLGALWSASGYVGAFIRASNVVYGVRENRPMWKTTPLRIGLTMLMMVTSMV-SIVIV 198
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS----KIMSI 210
LA LG+ IW+ + +L + + V LF A K+ + I
Sbjct: 199 VFTGPLADRTSQILGLGHTAFTIWS-IVKWPVLVFLVAAMIVLLFWAAPKTHGVRRFRWI 257
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
PG + + W+V + F YI F++Y+ Y +A ++ L++L++ + +LG E +
Sbjct: 258 SPGSLLAVVLWLVLSTGFATYIANFASYNKTYGTVAGVIVFLLWLWLSNLAILLGLEFDV 317
Query: 271 SMIIYY 276
+ +
Sbjct: 318 ELTAEH 323
>gi|182416151|ref|YP_001821217.1| ribonuclease BN [Opitutus terrae PB90-1]
gi|177843365|gb|ACB77617.1| ribonuclease BN [Opitutus terrae PB90-1]
Length = 331
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 77 PITDEILQVL--AVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
P+ E +Q L A A G+ +S L A Y S+ +AL LN AY E R
Sbjct: 104 PLLREQMQRLTSAGEAAGIGALVSLLLAVYASAKATKALITGLNIAYDEEERR------- 156
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG------RIYATML 187
G+V L +V L + + LAL V G+L G R +
Sbjct: 157 ---GFVRLQAVALALTLGAVLGAVLALGLVAVLPSVAGHLGWSDAAGTAVNWLRWPLLVG 213
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+GL ++ F P+ L G + W+V ++ F+ Y+ T Y Y L
Sbjct: 214 GFMLGLGVLYRFGPSRNPPQWRWLSAGAVVATGLWIVASLGFSFYVSTLGNYEKTYGSLG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
+++ L++LY+ G +LGAELNA M
Sbjct: 274 ALVVFLLWLYLTGYVVLLGAELNAEM 299
>gi|148253887|ref|YP_001238472.1| hypothetical protein BBta_2397 [Bradyrhizobium sp. BTAi1]
gi|146406060|gb|ABQ34566.1| putative membrane protein of unknown function with ribonuclease
domain [Bradyrhizobium sp. BTAi1]
Length = 352
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 130/275 (47%), Gaps = 24/275 (8%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++Y ++ E A+A+ ++ LL++FP + + G + ++ + G
Sbjct: 59 DVLYRVYQNITEHRIVALAAGMTFYTLLAIFPALAALVAIYGLFSDPARITGHLEQLQGL 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNG-VEALRISLNRAYRVVEM 125
P D++ +V A ++ L F IS LA + +S+N +++L +LN YR E
Sbjct: 119 LPGGAIDIARDQLTRVSAKGSQALGLTFGIS-LAISLWSANAAMKSLFDTLNVVYREPET 177
Query: 126 RSWY----ITRLISFGYVLLASVTL---VIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
R ++ I+ L + G +L A V + V++ V ++ L+ A +LLL I
Sbjct: 178 RGFFKLNAISLLFTGGAILFALVAIGAIVVVPVVLHSMGLSDA---------ADLLLRI- 227
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
GR A + + +GL ++ + P + K I G W+ G+ LF+ Y F +
Sbjct: 228 -GRWPAIFVCVSLGLALIYRYGPDREEPKWRWISWGSALAAALWLGGSALFSWYAANFGS 286
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
++ Y L + + + ++++ + ++G EL+A +
Sbjct: 287 FNATYGSLGAAIGFMTWIWISAIVILIGGELDAEL 321
>gi|311742300|ref|ZP_07716109.1| ribonuclease BN [Aeromicrobium marinum DSM 15272]
gi|311313928|gb|EFQ83836.1| ribonuclease BN [Aeromicrobium marinum DSM 15272]
Length = 295
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 35/229 (15%)
Query: 53 LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
L + P+ +D +VIA P DE+L+ G F + ++ +G AL
Sbjct: 79 LASQALTPSTVD-------QVIA-PTLDEVLE------GGRFDVVSIGFVLALWSGSRAL 124
Query: 113 RI---SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA---YVRKF 166
+ ++ Y + R TR +SFG L +V LVI V +PL LA VR
Sbjct: 125 NVFIDTITIMYGLGGRRGIVKTRALSFG---LYAVALVIG---IVLVPLVLAGPEVVRAL 178
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLI--FVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
P + ++ + +L + +G + H +P KS LPG FT + WV+G
Sbjct: 179 VPDEATFMTALY----WPAVLLMSVGFLASLYHWAVPERKSWAAG-LPGAAFTLLMWVLG 233
Query: 225 AVLFTHYIVTFSTYST-MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
A F + + FS+ T +Y LA+ + L+ LY+L + ++GA +NA++
Sbjct: 234 A-YFVRWALGFSSGGTSIYGPLAAPIAVLLLLYVLSISVLIGAAINAAI 281
>gi|312871837|ref|ZP_07731925.1| YihY family protein [Lactobacillus iners LEAF 3008A-a]
gi|329920156|ref|ZP_08276987.1| YihY family protein [Lactobacillus iners SPIN 1401G]
gi|311092779|gb|EFQ51135.1| YihY family protein [Lactobacillus iners LEAF 3008A-a]
gi|328936610|gb|EGG33054.1| YihY family protein [Lactobacillus iners SPIN 1401G]
Length = 306
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 24/251 (9%)
Query: 36 LLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
L S+FP I+ N+ L + + T ++V+F PE IA+ I + +L + G
Sbjct: 38 LFSIFPVIMIVGNMLPLLQINTSSIATYLNVIF---PEQIAQFILPIVKSLLHQHSNGSI 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WY--ITRLISFGYVLLASVTLVI 148
++ + A + S V ++RI++N+ Y V E WY +TR + +LL S+
Sbjct: 95 SLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTRTL----MLLLSI---F 147
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRI--YATMLALFIGLIF---VHLFLP 201
M ++F+ +A+ + LG L + W ++ Y L + + ++F ++ +P
Sbjct: 148 MIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILFNTYINYTIP 207
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K PG IFT I W + F Y+ F Y + + + L++L + +
Sbjct: 208 NISMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFLMWLNLAAIL 267
Query: 262 FILGAELNASM 272
F++G LNA++
Sbjct: 268 FLIGVCLNATI 278
>gi|297196223|ref|ZP_06913621.1| ribonuclease BN family membrane protein [Streptomyces
pristinaespiralis ATCC 25486]
gi|197720035|gb|EDY63943.1| ribonuclease BN family membrane protein [Streptomyces
pristinaespiralis ATCC 25486]
Length = 390
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 123/267 (46%), Gaps = 6/267 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ +L++FP ++ +L G +G V++ +
Sbjct: 92 VLRGTLKEFKDDELTDRAAALTYYGILALFPALLVLVSLLGIMG-QSTTQKVLENIQQLA 150
Query: 71 PEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P IT+ + Q+ + G + I L A +S++G V A S N Y V E R
Sbjct: 151 PGPARDVITNAVTQLQGSSSTGSILAIIGLLGALWSASGYVAAFIRSSNAVYDVPEGRPA 210
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATML 187
+ + G V LA + + +S + V + +A +G+ + +W + ++
Sbjct: 211 WKVLPVRLG-VTLALMIMACVSALIVILSGGIAQQLGTALGVGDTAMTVWTYAKWPVLVV 269
Query: 188 ALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + ++ P AK + I PG + W+V + F Y+ F +Y+ Y LA
Sbjct: 270 LVSVMVALLYWATPNAKVRGFKWITPGSFIAVLIWLVASAGFAFYVANFGSYNKTYGTLA 329
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
I+ LV+L++ + +LG E +A ++
Sbjct: 330 GIIIFLVWLWITNLAILLGLEFDAELV 356
>gi|163735479|ref|ZP_02142912.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
gi|161391292|gb|EDQ15628.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
Length = 302
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 121/257 (47%), Gaps = 23/257 (8%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFV--PTVIDVVFGAWPEVIAKPITD---- 80
+A+ ++ ++LS+FP LA + + P V+ V E++ + D
Sbjct: 29 IAAGVAFYSMLSIFP------ALAALIAVLSLIADPEVVIVQLSELQELMPDDVYDILNA 82
Query: 81 EILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+I+ +++ + L +S L A + + GV A+ LN Y +W +
Sbjct: 83 QIVGLVSTSSDTLGWTGIVSVLVALWSARAGVGAMMHGLNVVYATDSRGTWR-----HYL 137
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA-LFIGLIFV 196
+L +++LV + V + + L +A V F ALG +I + + +A +F G+ +
Sbjct: 138 RAVLLTISLVAVGIVAL-LALVIAPVILAFLALGGFTSVIIDLLRWGLGIAVIFAGIGML 196
Query: 197 HLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ F P + + L PG +F +SW ++ F++Y+ F Y+ +Y + +++ LV+L
Sbjct: 197 YRFGPNRRPENTRFLTPGSVFAAVSWAALSIAFSYYVTHFGNYNEVYGSIGAVIAMLVWL 256
Query: 256 YMLGVFFILGAELNASM 272
++ + GA LNA +
Sbjct: 257 WISSFLVLFGAALNAEI 273
>gi|119716581|ref|YP_923546.1| ribonuclease BN [Nocardioides sp. JS614]
gi|119537242|gb|ABL81859.1| ribonuclease BN [Nocardioides sp. JS614]
Length = 327
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 19/265 (7%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
+A+ + A+LSV P I A G++ QF P + V A ++ A+ +TD +
Sbjct: 48 GLAAEAAFFAVLSVPPLIFAMAGAIGYV-TDQFSPAQVADVRAAVVDLSARALTDGAVHK 106
Query: 86 LAVPA------KGLFTISALAAAYFSSNGVEALRI---SLNRAYRVVEMRSWYITRLISF 136
+ P G F + +L +G AL + ++ + + R TR +SF
Sbjct: 107 IIEPTIDDVLRGGRFDVISLGFVLALWSGSRALNVFVDTITIMHGLGGHRGIVKTRALSF 166
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-IIWNGRIYATMLALFIGLIF 195
+LA VT V+ + +A P + V + P +LL+ W + + F+ ++
Sbjct: 167 LLYVLAMVTGVVTIPLVIAGP---SLVEDWLPERLDLLMGFYWP--VVTVVCICFLATLY 221
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASIMTCLVF 254
H+ +P ++ LPG F+ WVVG+ L ++ VT + ++Y LA+ + L++
Sbjct: 222 -HVSVPV-RTNWSFNLPGATFSLFCWVVGSYLLRWFLTVTATDSRSIYGPLAAPIAVLLW 279
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
LY++ + ++GA +NA+ + +K
Sbjct: 280 LYLVSIAVLIGAAVNAAFDTVFPQK 304
>gi|291455251|ref|ZP_06594641.1| membrane protein [Streptomyces albus J1074]
gi|291358200|gb|EFE85102.1| membrane protein [Streptomyces albus J1074]
Length = 382
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
L + LAA + +S V A S N Y + E R + + G +A V + + S +
Sbjct: 169 LAVVGVLAALWSASGYVGAFIRSSNAVYDMPEGRPVWKVLPVRVG-TTVALVVMAVGSAL 227
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS--- 209
V LA +G+ L +W+ + +L L IG+I + LF A +K
Sbjct: 228 IVVFTGDLARRAGSLLGIGDTALTVWSIAKWPVLLLLVIGMIAL-LFWAAPNTKGPGFRW 286
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ PG + W++ + F Y+ F +Y+ Y LA ++ LV+L++ + +LG E +
Sbjct: 287 VTPGSFLALVIWLLASAGFAVYVANFGSYNKTYGALAGVVVFLVWLWISNIAILLGLEFD 346
Query: 270 ASM 272
A +
Sbjct: 347 AEL 349
>gi|300771405|ref|ZP_07081281.1| probable ribonuclease BN [Sphingobacterium spiritivorum ATCC 33861]
gi|300762075|gb|EFK58895.1| probable ribonuclease BN [Sphingobacterium spiritivorum ATCC 33861]
Length = 336
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 129/294 (43%), Gaps = 43/294 (14%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV---------FGANLAGFLGAHQFVPT 61
++ + I F+++ M++ ++ + S+ P I+ +G L G GA
Sbjct: 16 LMMNVINGFLDDKCMKMSASLAYYTVFSIGPLIIIIIWCIGFFYGTQLDGPTGAR----- 70
Query: 62 VIDVVFGAWPEVIAKPITDEI---LQVLAVPAK-------GLFTISALAAAYFSSNGVEA 111
D VF + E+ K + ++ +Q ++ + G+ T+ + F
Sbjct: 71 --DEVFKEFSELFGKDVAVQVQSTIQKISFENRSNIGIIVGIVTLIITSTTIFVD----- 123
Query: 112 LRISLNRAYRVVEM--RSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRK 165
++ S+N ++V + W I RLISF VL L+I S + I +AL Y +
Sbjct: 124 IQDSINTIWKVKAKAKKGWLKLIINRLISFSMVLGLGF-LLIASLMINGIIVALTNYFGQ 182
Query: 166 FFPALGNLLLIIW-NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
+F + +L ++ W N I T++ G IF FLP AK + IL G IFT + ++ G
Sbjct: 183 YFENI-SLPMLDWINTGITFTVITALFGFIFS--FLPDAKVRFRDILGGAIFTALLFMFG 239
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ YI T S ++ Y SI+ L ++Y GAE + I Y +
Sbjct: 240 RYAISLYI-TQSATASAYGAAGSIIVLLGWVYYSSAILYFGAEFTKEIAIRYGK 292
>gi|258543569|ref|YP_003189002.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-01]
gi|256634647|dbj|BAI00623.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-01]
gi|256637703|dbj|BAI03672.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-03]
gi|256640757|dbj|BAI06719.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-07]
gi|256643812|dbj|BAI09767.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-22]
gi|256646867|dbj|BAI12815.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-26]
gi|256649920|dbj|BAI15861.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-32]
gi|256652910|dbj|BAI18844.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655964|dbj|BAI21891.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-12]
Length = 356
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 13/249 (5%)
Query: 37 LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL--- 93
LS+FP I ++ G Q V ++V+ P + D + ++A P L
Sbjct: 100 LSLFPAISSLISIYGLAFDVQTVAPQMEVLRSLLPPNAFNLLYDRVQTLVAEPPSSLTFN 159
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
IS A + +S ++ +LN AY E R+++I ++ +F L + V+ +
Sbjct: 160 LIISVSVALWSASAATRSIIAALNIAYNTRENRNFFIFQITAFALTLCGILGAVLTLALM 219
Query: 154 VAIPLALAYVRKFF---PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS- 209
VA+PL L P + W+G + ++ F L L+ I +
Sbjct: 220 VAMPLLLNLPALLHIPTPPGSIEFMARWSGPV---VMFTFETLALSALYRFGPNRHISTQ 276
Query: 210 ---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+LPG + + ++W+ ++ F++Y+ ++YS Y L + + +++ ++ ++GA
Sbjct: 277 WRWVLPGAVCSTLTWIAASLGFSYYVAHIASYSATYGPLGAFIAIMMWFFVTAWVVLMGA 336
Query: 267 ELNASMIIY 275
ELNA M Y
Sbjct: 337 ELNAEMESY 345
>gi|84501469|ref|ZP_00999674.1| Ribonuclease BN family protein [Oceanicola batsensis HTCC2597]
gi|84390760|gb|EAQ03248.1| Ribonuclease BN family protein [Oceanicola batsensis HTCC2597]
Length = 315
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 10/242 (4%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
LL++FP I LAG V I+ + PE A I D+ + V GL
Sbjct: 49 GLLALFPAITALMALAGLTFDASQVTAQIESISQFVPEAAADIIIDQAVAVTGSQDGGLG 108
Query: 95 TISALA---AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
+ L A + +S GV +L +N AY E R + L G L +V
Sbjct: 109 LAAILGFALAIWAASKGVGSLMEGINIAYDETETRGFVRLTLTRLGLTLFLVFGMVAGLG 168
Query: 152 VFVAIPLALAYVRKFFPALG-NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS- 209
+ +P L+ + LG L+I R A + G+ ++ P K S
Sbjct: 169 ATIVLPSILSLIN-----LGATTELLIGLARWIALLAMTVAGITVLYRVAPDRKDATWSW 223
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
++PG + + W+ + F Y+ F +Y + LA ++ L++L++ +LGAELN
Sbjct: 224 LVPGAVLATLLWIGASAAFAIYVQNFGSYQETFGTLAGVVILLMWLWISAYVILLGAELN 283
Query: 270 AS 271
A
Sbjct: 284 AE 285
>gi|188579427|ref|YP_001922872.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179342925|gb|ACB78337.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 367
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 11/251 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ A+L++FP + ++ G + + T ++ + G P+ + ++ +++
Sbjct: 92 VAAGVTFYAILALFPAVAALVSIYGAVADPSTISTHLNELRGILPDGAIDIVGGQVKRLV 151
Query: 87 --AVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
A GL + ++ + +S+NG ++A+ +LN AY E RS+ + L S + A
Sbjct: 152 DKGDAALGLTALVSILLSLWSANGGMKAIFDALNIAYEEEEKRSFVMLNLQSLAFTAGAL 211
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV-HLFLPA 202
+ +V+ V +P AL + A LL + +LAL IG + V + + P+
Sbjct: 212 LFVVLALTGIVVVPAALQVLGLDQKAWYIALLR------FPALLALVIGTLAVLYRYGPS 265
Query: 203 A-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K K + G W+V + LF+ Y+ F +Y+ Y L + + + ++++
Sbjct: 266 RRKPKWRWVTWGSAVAGTLWLVASGLFSWYVANFGSYNETYGSLGAAIGFMTWIWISTTV 325
Query: 262 FILGAELNASM 272
+LGAELNA M
Sbjct: 326 VLLGAELNAEM 336
>gi|148259057|ref|YP_001233184.1| putative ribonuclease BN [Acidiphilium cryptum JF-5]
gi|326402184|ref|YP_004282265.1| putative ribonuclease [Acidiphilium multivorum AIU301]
gi|146400738|gb|ABQ29265.1| putative ribonuclease BN [Acidiphilium cryptum JF-5]
gi|325049045|dbj|BAJ79383.1| putative ribonuclease [Acidiphilium multivorum AIU301]
Length = 283
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 89/172 (51%), Gaps = 7/172 (4%)
Query: 103 YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY 162
Y S++G+++L +LN ++ E R ++ + ++ L+A + VI V V +PL LA+
Sbjct: 108 YSSASGIKSLIYALNVIHKRQETRGFFEFQAVTLAMTLIAMLGAVIAIAVLVGMPLVLAF 167
Query: 163 VR-KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWIS 220
+ PA+ L ++ + + L +GL++ F PA + ++PG + +
Sbjct: 168 LGLAKAPAV---LTVLPGFALLIGSMGLALGLLY--RFGPAFGRDAGHPVVPGALVAILV 222
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
W+V + F Y+ F+ YS Y LA+I+ +++ Y+ + GA NA++
Sbjct: 223 WLVVSYGFAVYVGQFAAYSRTYGPLATIIGLMMWFYLSAYAVLFGALFNATL 274
>gi|225870127|ref|YP_002746074.1| ribonuclease BN-like family protein [Streptococcus equi subsp. equi
4047]
gi|225699531|emb|CAW93105.1| ribonuclease BN-like family protein [Streptococcus equi subsp. equi
4047]
Length = 312
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 116/269 (43%), Gaps = 15/269 (5%)
Query: 13 YDAIEHFVEEDGWAMASHISLSAL-------LSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
Y+ I+ F+ ++ + LSA+ L+ FP IV AN+ +L + ++ +
Sbjct: 16 YEPIQAFMRH---FQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--ISDLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I + + ++ + + P+ + ++ L + S + +L+ + N+AY E
Sbjct: 71 MKEQLPKDIYRSASSIVVNIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAFNKAYDASEH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + L+ LL L A+ + + + N+ + T
Sbjct: 131 RDFLLGHLVGLLTSLLILFLLTFALIFSTFSKAAIQVLDRHYHLNDNITTLFLFLIQPIT 190
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L +F+GL+ ++ LP K KI ILPG FT + + + +Y+V
Sbjct: 191 ILIIFVGLMLLYFLLPNIKIKKIRYILPGTFFTTFVMIFLSNMVGNYVVHNVERMVDIKT 250
Query: 245 LASIMTCLVFLY--MLGVFFILGAELNAS 271
S+M ++ L+ L I+GA NA+
Sbjct: 251 FGSVMIFIIMLWFIFLARILIMGAVFNAT 279
>gi|146277245|ref|YP_001167404.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
gi|145555486|gb|ABP70099.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
Length = 322
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 114/241 (47%), Gaps = 8/241 (3%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-- 93
LL++FP + +L G + ++ + G P + +T ++ + + L
Sbjct: 54 LLALFPTLAAFVSLYGLFADPAVIADQVESLRGVLPAEGIELVTAQLRTLAGGQSASLTV 113
Query: 94 -FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
F IS L A + +++G++AL ++N A+ E RS+ L+SF L A + +S +
Sbjct: 114 GFAISFLIAFWSANSGMKALIEAMNIAHDEREKRSFLKLTLLSFALTLGA----MTLSIL 169
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS-IL 211
+ + V F +++W R +L + + ++ + P+ K+ +
Sbjct: 170 MITAVAVVPAVLAIFDLGSGASVLVWLVRWPLLLLVVAGAMAALYRWAPSRKAPEWRWVT 229
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
G + W+V ++ FT Y+ F+ YS Y L +++ L+++++ + I+GAE+N+
Sbjct: 230 WGSGIATVVWLVASIAFTIYLENFANYSATYGSLGALVGLLLWIWIAVMILIIGAEINSE 289
Query: 272 M 272
M
Sbjct: 290 M 290
>gi|116334154|ref|YP_795681.1| ribonuclease BN-like family protein [Lactobacillus brevis ATCC 367]
gi|116099501|gb|ABJ64650.1| Ribonuclease BN-like family enzyme [Lactobacillus brevis ATCC 367]
Length = 303
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 2/237 (0%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS+FP ++ A+L +L TV++ + PE I + I L + G+ +
Sbjct: 40 LLSLFPALLVIASLLPYLNIQ--TETVLESIEPMVPESIFSMLKPIIHSFLNTRSGGVLS 97
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
I + A + SS V A + ++N AY V + ++ + R+++F +++ L ++ F
Sbjct: 98 IGVIVALWSSSRAVAAFQRTVNGAYGVAKNQNALVNRIVAFFWMVALIAFLFVLMLFFSF 157
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ L + + ++ I + T L + + L+ + F+P+AK K + PG +
Sbjct: 158 GQIILEQLAPYLHVPHEIIGYINAAKWPVTFLVVLLVLMILLYFVPSAKLKWRFVWPGAL 217
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ W++ + F+ Y+ F Y + + + + +L G+ + GA LNA++
Sbjct: 218 TATVGWLLLSQAFSLYVKYFVHNMDSYRTIGTFIVLMFWLDFTGLILMFGAVLNAAI 274
>gi|319949392|ref|ZP_08023458.1| ribonuclease BN [Dietzia cinnamea P4]
gi|319436939|gb|EFV91993.1| ribonuclease BN [Dietzia cinnamea P4]
Length = 341
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 23/263 (8%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWPEVIAKPITDEI 82
G +A ++ +LS+FP ++ +L G G + V V+D++ P + P+ +
Sbjct: 2 GPDLAGSLTYYGVLSLFPAVLVVVSLLGVFGQGSRTVDAVMDMLSDVAPPEVLDPVRGPV 61
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
++ PA G I A A +S++ V AL ++N + + E R + RL+ G L
Sbjct: 62 EALVTTPAAGTALIVGTAVALWSASRYVRALGRAMNAMFGIEEGRPPW--RLLPAGLALT 119
Query: 142 A-SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLIFVHLF 199
A + LV + V +A +A + LG+ L +W + A ++A+ + L ++ F
Sbjct: 120 ALLIVLVAVGGVALAFSGPVAETVGDWIGLGDTALAVWGVAKWPAAVIAVILALAILYRF 179
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVL---------FTHYIVTFSTYSTMYAGLASIMT 250
P + G F+W+S A L + ++ F ++ +Y LA ++
Sbjct: 180 APN--------ISGRRFSWVSLGAAAALAIMGVATAGLSFFVSNFGNFNRVYGSLAGVIV 231
Query: 251 CLVFLYMLGVFFILGAELNASMI 273
L++L+++ + + G L+A ++
Sbjct: 232 FLLWLWLVNMAVVFGVRLDAEVL 254
>gi|84684451|ref|ZP_01012352.1| putative ribonuclease protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84667430|gb|EAQ13899.1| putative ribonuclease protein [Rhodobacterales bacterium HTCC2654]
Length = 316
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 18/267 (6%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ ALLS+FP I +AG + + P+ A I D+ V
Sbjct: 38 IAAGVAFFALLSLFPAITATIAVAGLFFDPAEITDPLQEFAAVLPDGAASIILDQATSVT 97
Query: 87 AVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
GL + L Y +S GVE L + LN AY + R +L F +
Sbjct: 98 GSDESGLGLAAILGLLLALYSASKGVENLMVGLNVAYAEKDERGLIRAKLTVFALTVFLV 157
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL--P 201
+ ++ V V +P+ L P LG ++ + + +L IG F LF P
Sbjct: 158 IGVIFSLGVMVVLPIVL----NVLP-LGGVVETVVRIVPWLVLLIFTIG-AFSILFRYGP 211
Query: 202 AAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+S + + ILPG + + W +V F+ Y F +Y + LA + L++L++ +
Sbjct: 212 DRRSARWVYILPGAVLACLLWGAASVGFSIYADNFGSYQESFGTLAGAIVLLMWLWISAL 271
Query: 261 FFILGAELNAS------MIIYYWRKKP 281
+LGA+LNA M R +P
Sbjct: 272 VVLLGAKLNAEIEAQHLMDTTVGRDRP 298
>gi|256820860|ref|YP_003142139.1| ribonuclease BN [Capnocytophaga ochracea DSM 7271]
gi|256582443|gb|ACU93578.1| ribonuclease BN [Capnocytophaga ochracea DSM 7271]
Length = 303
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 16/254 (6%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
AS IS S L++FPF++F NL ++ F + P +D +
Sbjct: 52 ASAISYSFFLAIFPFLLFILNLIPYIPIENFQGDFWAFIEDMLPPGTHDFFSDIFFDIAD 111
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
GL + + + +NG+ A+ +Y R+ YI + + Y L+ ++ L
Sbjct: 112 KKRGGLLSSVFFLSIFLMTNGIMAIFGGFEYSYHRQITRT-YIKQYL---YALMVAIILA 167
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNL-------LLIIWNGRIYATMLALF-IGLIFVHLF 199
++ V A+ + + Y P L + L+ + ++ ++ F GL+F
Sbjct: 168 LL--VLFAVIVFIYYEVYLVPYLDKINFITDYETLLKISKIVFVALITYFGTGLLFYFGT 225
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
+ +SK S G +FT + + V LF YI FS Y+ +Y + +++ L+++++
Sbjct: 226 VEGRESKFFS--AGSLFTVLLFGVTTYLFGIYIENFSRYNQLYGSIGALLIFLLYIWLNA 283
Query: 260 VFFILGAELNASMI 273
+LG ELNAS++
Sbjct: 284 NILLLGFELNASLL 297
>gi|225873491|ref|YP_002754950.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
gi|225791248|gb|ACO31338.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
Length = 316
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 74 IAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVE-ALRISLNRAYRVVEMR-SW 128
I P T ++Q P KG + A ++F++ G+ AL L RA R+ ++
Sbjct: 63 ILPPDTMLLVQAYFQPGKGRSAHLVLIAFGISFFAAMGLMLALMEGLRRAERLPRSAWNF 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL----LIIWNGRIYA 184
+ R+++ VLL + TLV M F + I + G+ L L+ W R+
Sbjct: 123 WWQRVVA---VLLVAGTLVPMFFATLLITFGHFIEHWIVDSAGHELRFYVLLFW--RVIR 177
Query: 185 TMLALFIGLIFV----HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+A+ ++ + H +P + LPG + ++W V +LF Y+ FS Y
Sbjct: 178 WGIAVVTSVVMLAMIYHFGVPR-RRHWKHALPGAMMATVTWFVSTLLFGWYVTRFSHYQV 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y L + M +V+LY++ + + GAE NA
Sbjct: 237 VYGSLGAGMATMVWLYIVSLSILFGAEFNAE 267
>gi|329113280|ref|ZP_08242063.1| Putative ribonuclease-like protein YfkH [Acetobacter pomorum DM001]
gi|326697421|gb|EGE49079.1| Putative ribonuclease-like protein YfkH [Acetobacter pomorum DM001]
Length = 356
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 13/249 (5%)
Query: 37 LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL--- 93
LS+FP I ++ G Q V ++V+ P + D + ++A P L
Sbjct: 100 LSLFPAISSLISIYGLAFDVQTVAPQMEVLRNLLPPNAFTLLYDRVQTLVAEPPSSLTFN 159
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
IS A + +S ++ +LN AY E R+++I ++ +F L + V+ +
Sbjct: 160 LIISVSVALWSASAATRSIISALNIAYNTRENRNFFIFQITAFALTLCGILGAVLTLALM 219
Query: 154 VAIPLALAYVRKFF---PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS- 209
VA+PL L P + W+G + ++ F L L+ I +
Sbjct: 220 VAMPLLLNLPALLHIPTPPGSIEFMARWSGPV---VMFTFETLALSALYRFGPNRHISTQ 276
Query: 210 ---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+LPG + + ++W+ ++ F++Y+ ++YS Y L + + +++ ++ ++GA
Sbjct: 277 WRWVLPGAVCSTLTWIAASLGFSYYVAHIASYSATYGPLGAFIAIMMWFFVTAWVVLMGA 336
Query: 267 ELNASMIIY 275
ELNA M Y
Sbjct: 337 ELNAEMESY 345
>gi|24379941|ref|NP_721896.1| hypothetical protein SMU.1555c [Streptococcus mutans UA159]
gi|290580080|ref|YP_003484472.1| hypothetical protein SmuNN2025_0554 [Streptococcus mutans NN2025]
gi|24377923|gb|AAN59202.1|AE014987_1 conserved hypothetical protein [Streptococcus mutans UA159]
gi|254996979|dbj|BAH87580.1| hypothetical protein [Streptococcus mutans NN2025]
Length = 310
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 20/279 (7%)
Query: 16 IEHFVEEDGWAMASHISLSAL-------LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+++F+E + +S + LS++ L++FPF++ ANL +L H ++ +
Sbjct: 14 VQNFLE---YYKSSEMDLSSIAVAYYLILTIFPFLILLANLFPYL--HIDTSELLSFMKN 68
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE + + + + + P+ L ++ + + S + L+ S+N++Y + R
Sbjct: 69 NLPEQLYENTSGIVRGIFNKPSTSLLWLAIVTGLWTMSKSLTFLQKSMNKSYGIQNHRDL 128
Query: 129 YITRLISFGYVLLAS--VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ ++ LL + L IM F L Y F +L I+ N T
Sbjct: 129 ILGHIVGIFSSLLVIFFLALAIMLSTFGKTVLTFLYHNSFLNQ--DLYDILMNLTQPVTA 186
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYI--VTFSTYSTMYA 243
F+ L ++ LP + KI ILPG IFT + LF YI T S +
Sbjct: 187 AIFFVALGVLYYILPNVRIKKIRYILPGTIFTSFLFFTMTSLFGTYINYATASMENLRVF 246
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK-KP 281
G ++ +++ + ILGA LNAS Y ++ KP
Sbjct: 247 GSVTLFVLMLWFIVFARILILGAVLNASYQKKYVKEFKP 285
>gi|332531931|ref|ZP_08407815.1| ribonuclease BN [Pseudoalteromonas haloplanktis ANT/505]
gi|332038558|gb|EGI75001.1| ribonuclease BN [Pseudoalteromonas haloplanktis ANT/505]
Length = 317
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 125/276 (45%), Gaps = 26/276 (9%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI+ + E++ +A+ ++ ALL++FP I ++ + + + + +
Sbjct: 22 WDIVKRIFKQMSEDNLSIVAAGVAFYALLAIFPAIAAMVSVYAYFSSPADISDHLSKIVT 81
Query: 69 AWPEVIAKPITDE-ILQVLAVPAKGLFTI-------SALAAAYFSSNGVEALRISLNRAY 120
P P T E IL ++ AK + + + SS G +AL + N +Y
Sbjct: 82 LLP-----PSTSELILSQVSSLAKTSSASLSLSAIGTLILTIWSSSKGSQALITACNISY 136
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIW 178
R E RS++ +L+ F + + A V + + +P+ L V ++ L + LI W
Sbjct: 137 REYEKRSFFQAQLVRFLFSVGAIVVAIFALLIIGILPIVLNLVGLKESIDLL--IKLISW 194
Query: 179 NGRIYATMLALFIG--LIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+LA L+ ++ + P K +K I G + W++ ++ F+ Y+ F
Sbjct: 195 ------PLLAFTFNFALVLLYRYAPHRKPAKWRWITMGSSIATVLWILASIGFSFYVSRF 248
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S+Y+ Y L ++ L++LY+ LGA +NA+
Sbjct: 249 SSYNETYGSLGGVVIMLMWLYISAYIITLGAVINAA 284
>gi|163794700|ref|ZP_02188670.1| putative ribonuclease protein [alpha proteobacterium BAL199]
gi|159179973|gb|EDP64498.1| putative ribonuclease protein [alpha proteobacterium BAL199]
Length = 297
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 13/189 (6%)
Query: 101 AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL 160
A + S+ G AL +++ AY W R+ + + L A + +++ +A A
Sbjct: 94 AIWSSAKGATALLSAMDIAYNETHRSGWIRPRITALAFTL-AGLVFAVLAIGLLAAVPAA 152
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWI 219
+ F + N+LL R + + L ++ + P +S + + I PG I +
Sbjct: 153 VALLAFRDTVSNMLL---GARWLLLAGVVLVALGLLYRYGPNRRSARTVWITPGSILATV 209
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY---- 275
W+ + F Y+ TY+ + L +++ L++LY+ +GAELNA + ++
Sbjct: 210 LWLAASWGFGRYVANVGTYNETFGALGAVVVLLMWLYISAYIVCIGAELNAELELHTSAD 269
Query: 276 ----YWRKK 280
WR K
Sbjct: 270 TTTGRWRPK 278
>gi|260102705|ref|ZP_05752942.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260083491|gb|EEW67611.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 307
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRS 127
+P+ ++ I I +L + G + + A + SN V A+R+ NR Y V VE++
Sbjct: 72 FPDQVSSFIMPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELK- 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-------IWNG 180
++ L S L+ + +M +F A+ + LA+ ++ + + I I++
Sbjct: 131 --LSMLNSLWTRLIMVIFTTLMIIIFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKIFSY 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R L + + + +++ LP K K I PGV T W+ + LF+ Y+ F
Sbjct: 189 RYPVIFLIIILAVFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFPITWK 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + + + +++L + + F+ G +NA++I
Sbjct: 249 NYGIVGTFIIFMLWLNIASLLFLFGVAVNATII 281
>gi|163850307|ref|YP_001638350.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|240137378|ref|YP_002961849.1| Ribonuclease BN [Methylobacterium extorquens AM1]
gi|163661912|gb|ABY29279.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|240007346|gb|ACS38572.1| Ribonuclease BN [Methylobacterium extorquens AM1]
Length = 388
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 130/275 (47%), Gaps = 23/275 (8%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI F ++ ++A+ ++ LLS+FP I G + + + + G
Sbjct: 95 WDIATRVYLEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLHG 154
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-FTI-SALAAAYFSSNG-VEALRISLNRAYRVVEM 125
PE + I +++ ++ + L FT ++L + +S+N ++A+ +LN Y E
Sbjct: 155 VLPESAIEIIGEQVKRIATKGSGALGFTFFTSLTLSLWSANAAMKAMFDALNVVYEEEEK 214
Query: 126 RS--WYITRLISFG-----YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
R+ W R ++F +++LA +++V++ VF F LG+ +I
Sbjct: 215 RNFFWLNVRSLTFTAGALLFIILALISIVVLPVVF------------NFLGLGDGARLIA 262
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
R +L L GL ++ + P+ +++ + G + + W++ ++LF+ Y+ F
Sbjct: 263 MARWPVLLLVLLGGLAVLYRYGPSRERARWRWVGAGSVVAGVLWLIASILFSWYVANFGN 322
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ Y L +++ + ++++ +LG E+NA +
Sbjct: 323 YNETYGSLGAVIGFMTWIWISATIVLLGGEINAEI 357
>gi|325285231|ref|YP_004261021.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
gi|324320685|gb|ADY28150.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
Length = 328
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 121/267 (45%), Gaps = 28/267 (10%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVP--------TVIDVVFGAW-----PEVI 74
AS I+ S +++FP ++F L FL +P T ++ F A+ P I
Sbjct: 55 ASAIAFSLFMALFPLLIFLVTLIPFL-----IPYVDSGNPDTNLNTEFIAYLEYVLPNAI 109
Query: 75 AKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
D+I ++++ GL + + + + + +NGV A+ +Y V R + L
Sbjct: 110 NDYFFDQIYDEIMSQKRGGLLSSTFVLSIFLIANGVNAIFSGFENSYHVSLNRHFLRQYL 169
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL----ALAYVRKFFPALGNLLLIIWNGRI----YAT 185
+ LL S+ +++ + V++ + ++ + + G IW I Y T
Sbjct: 170 YALMVGLLLSILIIVSAIVYMYFEIYVIENISDTTQVYFGTGLEETDIWTTEIAKVVYFT 229
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L+ ++ + ++ F A K G + T I +V+ + LF Y+ F+ Y+ +Y L
Sbjct: 230 FLS-YLSISILYYFGTAEGKKTKFFSSGSLMTTILFVLTSYLFGVYVDKFARYNELYGAL 288
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
++ +V++++ +LG ELNA++
Sbjct: 289 GGLLILMVYIWLNANILLLGFELNATL 315
>gi|302532125|ref|ZP_07284467.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
gi|302441020|gb|EFL12836.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
Length = 343
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLI-FVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAV 226
+G+ + +W+ + +L L G+I ++ P AK + + PG + + W+V +
Sbjct: 203 GVGDTAMTVWSIAKWPVLLVLVTGMIALLYWAAPNAKGRGFRWVTPGSLLALVIWMVASA 262
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
F Y+ F +Y+ Y LA ++ LV+L++ + +LG E +A ++
Sbjct: 263 GFAFYVANFGSYNKTYGTLAGVIIFLVWLWITNLAVLLGLEFDAELV 309
>gi|290961371|ref|YP_003492553.1| hypothetical protein SCAB_70211 [Streptomyces scabiei 87.22]
gi|260650897|emb|CBG74014.1| putative membrane protein, ribonuclease-like [Streptomyces scabiei
87.22]
Length = 365
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 10/268 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + F +++ A+ ++ +LS+FP I+ ++ G +G + ++D +
Sbjct: 49 VVRRTAKEFQDDELSDRAAALTYYGVLSLFPAILVLVSMLGVVG-QRATDRILDNIGDLA 107
Query: 71 PEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMR-S 127
P + D ++Q+ G L I L AA +S++G V A + N Y + E R +
Sbjct: 108 PGPARDILRDAVVQLSDSGGTGGLLAIVGLLAAVWSASGYVAAFIRTSNAVYDLPEGRPA 167
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFV-AIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W +T L G L+ V L + + V PLA LG + +WN + +
Sbjct: 168 WKVTPL-RIGLTLVLMVMLAASALIVVFTGPLAERAGTTI--GLGGAAIAVWNIAKWPVL 224
Query: 187 LALFIGLI-FVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L +I ++ P + + + PG I + W+ + F Y F +Y+ Y
Sbjct: 225 LVLVTLMIALLYWAAPNVRGRGFRWVSPGGIVATLIWLAASAGFAVYAANFGSYNKTYGT 284
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM 272
LA + L++L++ + +LG E +A +
Sbjct: 285 LAGAVVFLIWLWLTNLAILLGLEFDAEL 312
>gi|315224046|ref|ZP_07865887.1| YihY family protein [Capnocytophaga ochracea F0287]
gi|314946017|gb|EFS98025.1| YihY family protein [Capnocytophaga ochracea F0287]
Length = 303
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 16/254 (6%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
AS IS S L++FPF++F NL ++ F + P +D +
Sbjct: 52 ASAISYSFFLAIFPFLLFILNLIPYIPIENFQGDFWAFIEDMLPPGTHDFFSDIFFDIAD 111
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
GL + + + +NG+ A+ +Y R+ YI + + Y L+ ++ L
Sbjct: 112 KKRGGLLSSVFFLSIFLMTNGIMAIFGGFEYSYHRQITRT-YIKQYL---YALMVAIILA 167
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNL-------LLIIWNGRIYATMLALF-IGLIFVHLF 199
++ V A+ + + Y P L + L+ + ++ ++ F GL+F
Sbjct: 168 LL--VLFAVVVFIYYEVYLVPYLDKINFITDYETLLKISKIVFVALITYFGTGLLFYFGT 225
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
+ +SK S G +FT + + + LF YI FS Y+ +Y + +++ L+++++
Sbjct: 226 VEGKESKFFS--AGSLFTVLLFGLTTYLFGIYIENFSRYNQLYGSIGALLIFLLYIWLNA 283
Query: 260 VFFILGAELNASMI 273
+LG ELNAS++
Sbjct: 284 NILLLGFELNASLL 297
>gi|120434656|ref|YP_860345.1| ribonuclease BN [Gramella forsetii KT0803]
gi|117576806|emb|CAL65275.1| ribonuclease BN [Gramella forsetii KT0803]
Length = 338
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 8/206 (3%)
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE ITD + V+ K + +S L + + ++ G AL +N AY + R
Sbjct: 103 PEQAYGMITDILNPVINQDRKEIGWGLLVSILVSIWSANKGTSALFQGVNIAYDETDNRG 162
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L++ + L V +I + + PL + + P L ++L W ++ ++
Sbjct: 163 LIKKNLLTLLFTLAGVVIGLISLLIVIFFPLLVKNI-GLTPGLEDML--TWLRWVFLGII 219
Query: 188 ALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L V+ P ++ K + G I I W+ G++ F+ Y+ F +Y +Y A
Sbjct: 220 -LISTLSMVYKIAPNRSRPKFRWVSWGAILGTIFWLAGSMGFSWYVGNFGSYDDLYGSFA 278
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
++ +++L++ ++GAE+N+ M
Sbjct: 279 AVAILMLWLFLTAFIVLMGAEINSEM 304
>gi|241896536|ref|ZP_04783832.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
gi|241870258|gb|EER74009.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
Length = 295
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 8/240 (3%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS+FP ++ A+L +L TV++ + PE I + I L + G+ +
Sbjct: 40 LLSLFPALLVIASLLPYLNIQ--TETVLESIEPMVPESIFSMLKPSIHSFLNTRSGGVLS 97
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
I + A + SS V A + ++N AY V + ++ + R+++F +++ L ++ F
Sbjct: 98 IGVIVALWSSSRAVAAFQRTVNGAYGVAKNQNALVNRIVAFFWMVALITFLFVLMLFFSL 157
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ L + + ++ I + T L + + L+ + F+P+AK K + PG +
Sbjct: 158 GQIILEQLAPYLHVPHEIIGYINAAKWPVTFLVVLLVLMILLYFVPSAKLKWRFVWPGAL 217
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS---IMTCLVFLYMLGVFFILGAELNASM 272
+ W++ + F+ Y+ F Y + + +M CL F ++ +F GA LNA++
Sbjct: 218 TATVGWLLLSQAFSLYVKYFMHNMDSYRTIGTFIVLMFCLDFTELILMF---GAVLNAAI 274
>gi|209964739|ref|YP_002297654.1| ribonuclease BN family protein [Rhodospirillum centenum SW]
gi|209958205|gb|ACI98841.1| ribonuclease BN family protein [Rhodospirillum centenum SW]
Length = 327
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 122/270 (45%), Gaps = 12/270 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I+ + ++ W +A+ ++ LL++FP + +L G + Q V + +
Sbjct: 35 WSILKRTLAESSRDNVWVVAAGVAFLTLLAIFPALTATFSLYGLVADPQQVEEQVAALAS 94
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + ++ + + L I A + +S GV+AL +LN Y E
Sbjct: 95 VLPAQGREVLVGQLHALAGQSGEALGFGLVIGLGIALWSASGGVKALMSALNIVYEEEEK 154
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ + L + L+ + V +A P+ L ++ A + L+ W
Sbjct: 155 RSFLHFTGTALALTLGFILLLIFLIAVVIATPVVLGFLGLGGTADVLVRLLRW------P 208
Query: 186 MLALFIG--LIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+LA I L ++ + P+ A+++ + G + W+VG++ F+ YI F+ Y+ Y
Sbjct: 209 LLACGIAGALAVLYRYGPSRARARWRWVSWGSAAATLLWIVGSIAFSLYITHFADYNATY 268
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
L + + L++LY+ +LGAEL+A M
Sbjct: 269 GSLGAGIILLLWLYLGAYAVLLGAELDAEM 298
>gi|13488510|ref|NP_109517.1| hypothetical protein mll9669 [Mesorhizobium loti MAFF303099]
gi|14028264|dbj|BAB54856.1| mll9669 [Mesorhizobium loti MAFF303099]
Length = 356
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 83 LQVLAVPAKGLFTIS---ALAAAYFSSN-GVEALRISLNRAYRVVEMRSWYITRLISFGY 138
LQ LA G I L A +SSN G++AL ++N AY E RS L+S +
Sbjct: 134 LQALASQKPGALGIGFFIGLGIALWSSNSGMKALFDAMNIAYEEREKRSIIALNLMSILF 193
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+ A + +++ +P L Y + A L+ + R + A+ G+ ++
Sbjct: 194 TVGALLIGILLLLTVGVVPALLRYF--YLDAWTETLVAV--SRWPILVGAMLTGISLLYR 249
Query: 199 FLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F P+ ++K + G + ++W+ + LF+ Y+ F+ Y+ Y L +++ +++ ++
Sbjct: 250 FGPSRERAKWRWLSWGSLIATVAWIAASWLFSFYLQHFANYNATYGSLGAVVGLMMWTWI 309
Query: 258 LGVFFILGAELNASM 272
+ I GA +NA M
Sbjct: 310 SVIILIAGAAINAEM 324
>gi|170748550|ref|YP_001754810.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170655072|gb|ACB24127.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 375
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 122/255 (47%), Gaps = 17/255 (6%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
A+A+ ++ LLS+FP I + G + + + P + I D++ ++
Sbjct: 99 AVAAGVTFYTLLSLFPAIAALVSCYGLFADVTVINDHLAQLHAVLPSGAVELIGDQVKRI 158
Query: 86 LAVPAKGLFTI---SALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
A G +I S+L + +S+N ++A+ +LN Y E R+++ ++ L
Sbjct: 159 -AAKGSGSLSITFFSSLLLSIWSANAAMKAMFDALNVVYEEEEKRNFF--------WLNL 209
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKF---FPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
S+T + + +F+ + L + V F LG+ ++ R A ++ L GL ++
Sbjct: 210 RSLTFTVGALLFIIVALNVIVVVPVVLNFLGLGSTAWLLAALRWPAILIVLLGGLSVLYR 269
Query: 199 FLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F P+ + ++ + G + + W+ ++LF+ Y+ F TY+ Y L +++ + ++++
Sbjct: 270 FGPSREHARWRWVGVGSVVAGLLWLAASLLFSWYVANFGTYNETYGSLGAVIGFMTWIWI 329
Query: 258 LGVFFILGAELNASM 272
+LG E+NA +
Sbjct: 330 SSTIVLLGGEINAEL 344
>gi|227540637|ref|ZP_03970686.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
gi|227239499|gb|EEI89514.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
Length = 336
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 45/295 (15%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV---------FGANLAGFLGAHQFVPT 61
++ + I F+++ M++ ++ + S+ P I+ +G L G GA
Sbjct: 16 LMMNVINGFLDDKCMKMSASLAYYTVFSIGPLIIIIIWCIGFFYGTQLDGPTGAR----- 70
Query: 62 VIDVVFGAWPEVIAKPITDEI---LQVLAVPAK-------GLFTISALAAAYFSSNGVEA 111
D VF + E+ K + ++ +Q ++ + G+ T+ + F
Sbjct: 71 --DEVFKEFSELFGKDVAVQVQSTIQKISFENRSNIGIIVGIVTLIITSTTIFVD----- 123
Query: 112 LRISLNRAYRVVEM--RSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRK 165
++ S+N ++V + W I RLISF VL L+I S + I +AL Y +
Sbjct: 124 IQDSINTIWKVKAKAKKGWLKLIINRLISFSMVLGLGF-LLIASLMINGIIVALTNYFGQ 182
Query: 166 FFPALGNLLLIIW--NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
+F + +L ++ W G + + ALF G IF FLP AK + IL G IFT + ++
Sbjct: 183 YFENI-SLPMLDWINTGITFMVITALF-GFIFS--FLPDAKVRFRDILGGAIFTALLFMF 238
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
G + YI T S ++ Y SI+ L ++Y GAE + I Y +
Sbjct: 239 GRYAISLYI-TQSATASAYGAAGSIIVLLGWVYYSSAILYFGAEFTKEIAIRYGK 292
>gi|86742177|ref|YP_482577.1| ribonuclease BN [Frankia sp. CcI3]
gi|86569039|gb|ABD12848.1| ribonuclease BN [Frankia sp. CcI3]
Length = 342
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 5/211 (2%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
V+ + I Q+L+ + +I + + + S + ++ AY E+RS +
Sbjct: 122 SVVDDAVRPTIDQILSRGRPDVISIGFVLSLWTGSTAMATFVNTITIAYGQRELRSAVRS 181
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGRIYATMLAL 189
RL++ L + VI+ V P ++ + P + L+ +++ + LA+
Sbjct: 182 RLLALWLFLAQVASGVILLPALVLGPELISRIFDASRHPLVSTLITLLYWPVVGLVALAM 241
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L HL LP + LPG I + W+VG+ + +Y+ ++ +Y L S +
Sbjct: 242 LTSLY--HLSLPV-RRPWWRALPGAILALVCWLVGSGVLRYYLEIVFSHELVYGSLGSPV 298
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+F Y+ + +LGAELNA++ R++
Sbjct: 299 AALLFFYITALAVLLGAELNAALDEQPPRRR 329
>gi|331696161|ref|YP_004332400.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
gi|326950850|gb|AEA24547.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
Length = 350
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 112/251 (44%), Gaps = 12/251 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A ++ A L++FP ++ + G + V +D + P A+PI + L +
Sbjct: 67 LAGGVAFFAFLALFPALIAAITVYGLVADPAQVGDQVDRLAAILP-AAARPIVADQLGAV 125
Query: 87 AVPAKGLFTI----SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ G + S LAA + +S G L + N AY E R + R + G L A
Sbjct: 126 SSAGTGALGVGLVVSLLAALWSASAGTMNLIRATNLAYDEEETRGFLRLRGTALGLTLAA 185
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
V +++ + A+P V LG L++ + ++ L + + V +
Sbjct: 186 IVFVLLAVALVAAMPAVFEAV-----GLGGAGLVVAQVVRWVLLVVLVVVALAVVYRVAP 240
Query: 203 AKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ K + G + + W+VG+++F+ Y+ F +Y+ Y LA + L++LY+
Sbjct: 241 DRDAPKFRWVSVGAVVATVLWLVGSIVFSVYVDNFGSYNKTYGALAGAVVLLLWLYLTSY 300
Query: 261 FFILGAELNAS 271
+LGAE+NA
Sbjct: 301 IVLLGAEINAE 311
>gi|88854744|ref|ZP_01129410.1| membrane protein [marine actinobacterium PHSC20C1]
gi|88815905|gb|EAR25761.1| membrane protein [marine actinobacterium PHSC20C1]
Length = 336
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 19 FVEEDGWAMASHISLSALLSVFP--FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
F+ G A+ ++ + L++FP V A G G Q V TV+D+ E I +
Sbjct: 26 FLRHRGIDTAATLTFFSALAIFPAALTVVSAFALG-QGRIQAVETVLDLA-----EEILQ 79
Query: 77 PITDEILQVLAVPAKGLFTIS----ALA-----AAYFSSNGVEALRISLNRAYRVVEMRS 127
P T + VL VP LF+I ALA + + S+ A + N Y V E R
Sbjct: 80 PDT---VDVLEVPLAQLFSIGSPGIALAIGIVLSVWSMSSYATAFGRAANSVYEVHEGR- 135
Query: 128 WYITRLISF-GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL------LIIWN- 179
RL+ F G +L+ SV L+I F A+ L A+G L + +W+
Sbjct: 136 ----RLVKFRGLMLILSVFLII---AFAAVIALLLTTPNVATAIGEALGFGEPWVAVWSY 188
Query: 180 GR--IYATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFS 236
GR + A +L L I +++ F P + + M + G +F +W + F Y+ T +
Sbjct: 189 GRWPVLAAILTLIIAVLY--YFTPNIRHERMRWVSTGAVFAIATWGLATAAFGLYVSTIA 246
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y +Y L + L++LY+ + + G E++A
Sbjct: 247 NYDRVYGWLGGALALLIWLYISNLALVAGIEVDAE 281
>gi|301299944|ref|ZP_07206172.1| YihY family protein [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852450|gb|EFK80106.1| YihY family protein [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 295
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 6/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-V 59
++E D+ +E E D + + I+ ALL++ P I+ N+ + + V
Sbjct: 4 LKEKLHKFRDLFLLIVERASEADINSTSITIAYYALLAILPTIILLGNILSIINLKEADV 63
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + KPI + +L+ + G+ ++S + A + S G+ AL+ LN A
Sbjct: 64 LNGLQVIVPSNVFTTLKPIIETMLKK---GSGGIASVSGILALWAVSRGINALKNGLNMA 120
Query: 120 YRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y V + + R+ S ++ + +V + VF +AL Y+ N + +
Sbjct: 121 YGVGKGTGTGAVLGRIFSIFITVVLGLLIVALFLVFSFGQIALDYITPLLNLSTNWIDLF 180
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + +F+ +I ++ +P AK + +LPG I I W+ + F+ Y+ F+
Sbjct: 181 MRWKWPTAAIGIFVIIILIYTLIPNAKLHFILVLPGAILATIGWLGLSQGFSIYVRYFTR 240
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L + + L++L G +LG+ +NA + Y+
Sbjct: 241 TLLSYEALGTFIVLLLWLNYTGWVIMLGSVVNAGLEYYF 279
>gi|90962240|ref|YP_536156.1| ribonuclease BN [Lactobacillus salivarius UCC118]
gi|227892347|ref|ZP_04010152.1| ribonuclease BN [Lactobacillus salivarius ATCC 11741]
gi|90821434|gb|ABE00073.1| Ribonuclease BN [Lactobacillus salivarius UCC118]
gi|227865896|gb|EEJ73317.1| ribonuclease BN [Lactobacillus salivarius ATCC 11741]
Length = 294
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 126/279 (45%), Gaps = 6/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-V 59
++E D+ +E E D + + I+ ALL++ P I+ N+ + + V
Sbjct: 3 LKEKLHKFRDLFLLIVERASEADINSTSITIAYYALLAILPTIILLGNILSIINLKEADV 62
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + KPI + +L+ + G+ ++S + A + S G+ AL+ LN A
Sbjct: 63 LNGLQVIVPSNVFTTLKPIIETMLKK---GSGGIASVSGILALWAVSRGINALKNGLNMA 119
Query: 120 YRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y V + + R+ S ++ + +V + VF +AL Y+ N + +
Sbjct: 120 YGVGKGTGTGAVLGRIFSIFITVVLGLLIVALFLVFSFGQIALDYITPLLNLSTNWIDLF 179
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + +F+ +I ++ +P AK + +LPG I I W+ + F+ Y+ F+
Sbjct: 180 MRWKWPTAAIGIFVIIILIYTLIPNAKLHFILVLPGAILATIGWLGLSQGFSIYVRYFTR 239
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L + + L++L G +LG+ +NA + Y+
Sbjct: 240 TLLSYEALGTFIVLLLWLNYTGWVIMLGSVVNAGLEYYF 278
>gi|322391709|ref|ZP_08065176.1| ribonuclease BN [Streptococcus peroris ATCC 700780]
gi|321145419|gb|EFX40813.1| ribonuclease BN [Streptococcus peroris ATCC 700780]
Length = 287
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + F+ T+ + + P+ I + + + +VL P+ GL
Sbjct: 38 LISIFPLLMIVVNILPYFQIPISNFLLTIKEFL----PDTIYEVVAKIVREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ + L+A + S + L+ + N+AY + + R ++ L+SFG +L ++ L +
Sbjct: 94 LSFAILSALWTFSKSMNFLQKAFNKAYGIAKNRGIISHQLMSLLVSFGLQILFALALFLS 153
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIM 208
F + + L Y + AL + L IYA + A+ +I ++ FLP K SKI
Sbjct: 154 MFGHMLLDLLKNYWKSE-SALFSYLQDFTGPLIYAFLFAI---VIMLYYFLPNVKVSKIR 209
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
++PG +F ++ + +F Y + Y
Sbjct: 210 YVIPGSLFVLVTTIALLNIFAAYFNNYVNY 239
>gi|189502450|ref|YP_001958167.1| hypothetical protein Aasi_1095 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497891|gb|ACE06438.1| hypothetical protein Aasi_1095 [Candidatus Amoebophilus asiaticus
5a2]
Length = 295
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
Query: 2 REYFCIVFDIIYDAIEHFV-EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++C + I+ + H + D + ++ + L++FP +F L ++ + VP
Sbjct: 13 NSHYCSILLQIFKELWHRILANDILERSYAVAFNFTLAIFPATIFIFTLIPYISIPELVP 72
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ID PE I + I L+ GL + + + Y SSNG+ +SL + +
Sbjct: 73 KLIDFFKEGIPETIYGALAPTIQDTLSKHRSGLLSFGFIYSLYLSSNGI----MSLIKNF 128
Query: 121 RVVEM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+V+ RS+ R I+ +TL +M +F +I L L R+ + N
Sbjct: 129 NLVDQPMSHYKRSYLQQRAIA------TILTLALMLALFSSI-LLLIVARQILDYMVNYE 181
Query: 175 LIIWNGRI----YAT----MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
LI I +A+ L FI + ++ P K IL G + + ++ ++
Sbjct: 182 LITHKVHISILPFASSIIVFLIFFIAIAGIYYLAPTNKQNRKFILIGALIATLGCLLASL 241
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F++Y+ F Y +Y L ++ +++L++L + ++G ELN ++
Sbjct: 242 AFSYYVNHFVKYG-LYGSLGVMIALMLWLFLLSLTLLIGFELNITL 286
>gi|221133917|ref|ZP_03560222.1| ribonuclease BN [Glaciecola sp. HTCC2999]
Length = 297
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 42/263 (15%)
Query: 28 ASHISLSALLSVFPFI-VFGANLAGFLG------------AHQFVPTVIDVVFGAWPEVI 74
A H++ +LLS+ PFI VF L+ F + FVPT D V+
Sbjct: 40 AGHLAYVSLLSLVPFIMVFFTMLSAFPAFAEIRLALESFIFNNFVPTSGD--------VL 91
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT--- 131
K I++ + + A G+ ++ +A + + +LN +R E R T
Sbjct: 92 QKYISEFVGNASGMGAVGIASLMVVALLL-----IMNIDKTLNTIWRTPEARPRMFTFAV 146
Query: 132 --RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+I+ G +++ S LV + A +Y ++ P LG LLL ++ ++ A
Sbjct: 147 YWMVITLGPIMMGSSILVSSYLLGFA-----SYAEEYTPGLGTLLL-----KMVPSVTAT 196
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F G + +++ +P + K L G I + + F Y+ +F +Y +Y LA I
Sbjct: 197 F-GFLILYMLVPNTRVKFSHALCGAILATFLFELSKKGFAFYVASFPSYQVIYGALAVIP 255
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE S+
Sbjct: 256 ILFVWVYLSWIVVLVGAEFTCSI 278
>gi|296534422|ref|ZP_06896866.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
gi|296265251|gb|EFH11432.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
Length = 340
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 40/265 (15%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
A+ ++ ALLSVFP + +L G V + G P I DE L+ LA
Sbjct: 71 AAGVTFYALLSVFPALTALVSLFGLFADPAMVGQQLQQAEGFIP-AGGMQIIDEQLRRLA 129
Query: 88 VPAKGLFTISA---LAAAYFSSN-GVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+G SA L A +S+N G +A+ +LN Y E R + LI+ + L A
Sbjct: 130 SGERGSLGFSAVLGLGVALWSANQGTKAMFDALNIVYEEKEKRGFLRRTLITLAFTLGAL 189
Query: 144 V-TLVIMSFVFVAIPLALAYVRKFFPALGNLLLII--WNGRIYATMLALFIGLIFVHL-- 198
V T++ MS V V + F + LLL + W +L LFI + L
Sbjct: 190 VFTMLAMSAVVVLP---VVLAFAGFESSTELLLRLARW------PLLILFITALLATLYR 240
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVL-----------FTHYIVTFSTYSTMYAGLAS 247
F P+ + + W+SW G V F+ Y+ F Y Y L +
Sbjct: 241 FGPSREK--------ARWRWVSW--GGVFAALAWAALSAGFSFYVGNFGNYDATYGSLGA 290
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
++ + ++++ + + GAELNA M
Sbjct: 291 VIGFMTWIWLSAMVVLFGAELNAEM 315
>gi|310829421|ref|YP_003961778.1| putative ribonuclease BN [Eubacterium limosum KIST612]
gi|308741155|gb|ADO38815.1| putative ribonuclease BN [Eubacterium limosum KIST612]
Length = 272
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 116/260 (44%), Gaps = 16/260 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
E D W + + +S +++ FP I+F N G +F+ D +F E + +
Sbjct: 17 EDMDRTDFWGICAQMSFYIIMAFFPLIIFLINFVG-----RFIVQFKDYLFDILKEYLPQ 71
Query: 77 PITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
D + ++ K L I L +F++ A+ +N+ Y E RS L
Sbjct: 72 LSYDYVRTLIDTLTKNLADNNYILVLFTFFFATLAARAIMTGMNQNYGNHESRSHLKIWL 131
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG----NLLLIIWNGRIYATMLAL 189
+SF + +L +++++++ +V Y+ LG N++L+ I++ + ++
Sbjct: 132 LSFLFTILFAISIILIISAYVFSEAISEYI---LVRLGIDQFNIILMNIFTFIFSLVTSI 188
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ V++ P + + M LPG +F+ + + +F ++ + Y+ +Y +
Sbjct: 189 FL-FTCVYVLAPDRQLRFMQGLPGAVFSTLGINIAFRIFLMFMNHSTKYTLLYGNFGGLF 247
Query: 250 TCLVFLYMLGVFFILGAELN 269
LV +Y + V LG ++N
Sbjct: 248 ALLVGIYFVCVILNLGGKIN 267
>gi|114561519|ref|YP_749032.1| ribonuclease BN [Shewanella frigidimarina NCIMB 400]
gi|122300991|sp|Q088X1|Y331_SHEFN RecName: Full=UPF0761 membrane protein Sfri_0331
gi|114332812|gb|ABI70194.1| tRNA-processing RNAse BN [Shewanella frigidimarina NCIMB 400]
Length = 320
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 31/247 (12%)
Query: 35 ALLSVFP-FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
++LS FP F N+ GF+ + F+P D V I + +A +KG
Sbjct: 57 SMLSAFPVFKGIRGNIEGFI-YNNFIPAAGDTV------------QVHINEFVANASKGT 103
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVI 148
F + +A + + + A+ +LN +R+ E RS+ ++ +++ G VL+ + +LV
Sbjct: 104 F-VGIIALVFVAIMLISAIDKALNNIWRITEKRSYVVSFSMYWMVLTLGPVLIGA-SLVA 161
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
S+V +A + P + L +I++ A++L L+ + +P K +
Sbjct: 162 TSYVVSLEVVAGTELSGLVPWIVERLPLIFSA---ASILLLY-------MVVPNKKVHFL 211
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
L G I + + G F Y+ F +Y +Y LA + V++Y+ + +LGAE+
Sbjct: 212 HALLGAIVAAVLFEAGKKGFAFYVTQFPSYEAIYGALAVVPILFVWVYLSWMIVLLGAEI 271
Query: 269 NASMIIY 275
A++ Y
Sbjct: 272 TAALPEY 278
>gi|300214900|gb|ADJ79316.1| Ribonuclease BN [Lactobacillus salivarius CECT 5713]
Length = 294
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 126/279 (45%), Gaps = 6/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-V 59
++E D+ +E E D + + I+ ALL++ P I+ N+ + + +
Sbjct: 3 LKEKLHKFRDLFLLIVERASEADINSTSITIAYYALLAILPTIILLGNILSIINLKEADI 62
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + KPI + +L+ + G+ ++S + A + S G+ AL+ LN A
Sbjct: 63 LNGLQVIVPSNVFTTLKPIIETMLKK---GSGGIASVSGILALWAVSRGINALKNGLNMA 119
Query: 120 YRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y V + + R+ S ++ + +V + VF +AL Y+ N + +
Sbjct: 120 YGVGKGTGTGAVLGRIFSIFITVVLGLLIVALFLVFSFGQIALDYITPLLNLSTNWIDLF 179
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + +F+ +I ++ +P AK + +LPG I I W+ + F+ Y+ F+
Sbjct: 180 MRWKWPTAAIGIFVIIILIYTLIPNAKLHFILVLPGAILATIGWLGLSQGFSIYVRYFTR 239
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L + + L++L G +LG+ +NA + Y+
Sbjct: 240 TLLSYEALGTFIVLLLWLNYTGWVIMLGSVVNAGLEYYF 278
>gi|114704910|ref|ZP_01437818.1| hypothetical protein FP2506_08236 [Fulvimarina pelagi HTCC2506]
gi|114539695|gb|EAU42815.1| hypothetical protein FP2506_08236 [Fulvimarina pelagi HTCC2506]
Length = 373
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
Query: 101 AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL 160
A + ++NG++ L ++N AY E RS+ ++F + ++ ++I+ V + +
Sbjct: 159 AMWSANNGIKTLFEAMNVAYGETEQRSFLKLNAVAFCF----TIGMIIVGIVLITAIGVI 214
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWI 219
+ K + I R L + + ++ + P+ K ++ ++ G T
Sbjct: 215 PAIMKILGLQTFSEIFIAALRWPVVFLLIVAAIAAIYRYGPSRKRARWKWVIGGAFLTAF 274
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
W+V ++ F+ Y+ F+ Y+ Y L +++ ++++++ V FI+GAE+NA M
Sbjct: 275 VWLVASISFSWYLQNFANYNATYGSLGAVIGFMMWVWVSSVIFIIGAEVNAEM 327
>gi|256824738|ref|YP_003148698.1| hypothetical protein Ksed_08810 [Kytococcus sedentarius DSM 20547]
gi|256688131|gb|ACV05933.1| predicted membrane protein [Kytococcus sedentarius DSM 20547]
Length = 417
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 13/266 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV---IDVVFGAWP 71
A+ F ++ +A+ ++ A+LS+FP I+ +L G G + I V GA P
Sbjct: 96 ALYEFTDDGCTDLAAGLTYFAVLSIFPAIIGLVSLLGVFGQGESTTQAFLQIAVDLGADP 155
Query: 72 EVIAKPITDEIL--QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ ++ + Q + A + L A + +SN V +NR Y V E R ++
Sbjct: 156 QSTGYTFIEDFITKQQESSGAGLALALGLLGALWSASNYVNGFSRMMNRIYEVPEGRPFW 215
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIYAT-- 185
+ R + +L + + ++ FV L F LG+L IW +
Sbjct: 216 VLRPVMVLVTVLVLLLVAVLGLSFV---LTGPVAESVFGVVGLGDLATTIWAWAKWPAAA 272
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ +FI + ++ P K + PG I ++ WV+ + F YI F Y Y +
Sbjct: 273 LIVIFI-IRLLYWATPNVKLPRQILTPGAILAFLIWVLASAAFGFYIANFGNYDATYGSM 331
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ L++L++ +LGAE++A
Sbjct: 332 AGVIVFLLWLWLTNTVLLLGAEIDAE 357
>gi|254559558|ref|YP_003066653.1| ribonuclease BN [Methylobacterium extorquens DM4]
gi|254266836|emb|CAX22635.1| Ribonuclease BN [Methylobacterium extorquens DM4]
Length = 388
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 124/258 (48%), Gaps = 23/258 (8%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
++A+ ++ LLS+FP I G + + + + G PE + I +++ ++
Sbjct: 112 SVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLHGVLPESAIEIIGEQVKRI 171
Query: 86 LAVPAKGL-FTI-SALAAAYFSSNG-VEALRISLNRAYRVVEMRS--WYITRLISFG--- 137
+ L FT ++L + +S+N ++A+ +LN Y E R+ W R ++F
Sbjct: 172 ATKGSGALGFTFFTSLTLSLWSANAAMKAMFDALNVVYEEEEKRNFFWLNVRSLTFTAGA 231
Query: 138 --YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+++LA +++V++ VF F LG+ +I R +L L GL
Sbjct: 232 LLFIILALISIVVLPVVF------------NFLGLGDGARLIAMARWPMLLLVLLGGLAV 279
Query: 196 VHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P+ +++ + G I + W++ ++LF+ Y+ F Y+ Y L +++ + +
Sbjct: 280 LYRYGPSRERARWRWVGAGSIVAGVLWLIASILFSWYVANFGNYNETYGSLGAVIGFMTW 339
Query: 255 LYMLGVFFILGAELNASM 272
+++ +LG E+NA +
Sbjct: 340 IWISATIVLLGGEINAEI 357
>gi|298502451|ref|YP_003724391.1| ribonuclease BN [Streptococcus pneumoniae TCH8431/19A]
gi|298238046|gb|ADI69177.1| possible ribonuclease BN [Streptococcus pneumoniae TCH8431/19A]
Length = 291
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 43 LISIFPLLLVVVNILPYFQIPVGEFLCFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 98
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG LL + L ++
Sbjct: 99 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLI 158
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 159 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNISNR 211
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 212 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 271
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 272 LGAVINASM 280
>gi|194398139|ref|YP_002037313.1| ribonuclease BN [Streptococcus pneumoniae G54]
gi|194357806|gb|ACF56254.1| ribonuclease BN, putative [Streptococcus pneumoniae G54]
Length = 286
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG LL + L ++
Sbjct: 94 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLI 153
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 154 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNISNR 206
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 207 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 266
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 267 LGAVINASM 275
>gi|86130265|ref|ZP_01048865.1| YihY family protein [Dokdonia donghaensis MED134]
gi|85818940|gb|EAQ40099.1| YihY family protein [Dokdonia donghaensis MED134]
Length = 313
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 117/256 (45%), Gaps = 17/256 (6%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV---IAKPITDEI 82
+ A I+ S +++FP ++F NL ++ F + ++ P +PI +I
Sbjct: 55 SRAGSIAYSFFMAIFPALIFVLNLIPYVPVPDFDIKFMAFIYELIPSQSLDFFRPIISDI 114
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY---- 138
Q GL +++ L A + ++NGV ++ ++ RS++ ++
Sbjct: 115 AQN---ERAGLLSVAGLLALFLTANGVNSIFSGFEGSHYNEINRSFFRQYAVAIATSIIL 171
Query: 139 -VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA-TMLALFIGLIFV 196
+LL + V++ F ++ + L R F ++ L+ ++ M+ I ++
Sbjct: 172 ALLLVTTISVVVYFEYLLVSLK---ERDFMSTDLDITLLSVGKNVFVLIMIYAVIATLYY 228
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
KS+ S PG + T + +++ LF YI TF Y+ +Y + +++ +++++
Sbjct: 229 FGTKEGRKSRFFS--PGALMTTVLFMITTYLFGIYIDTFGRYNELYGSIGALLIMMLYIW 286
Query: 257 MLGVFFILGAELNASM 272
+ +LG ELNA++
Sbjct: 287 LNSNLILLGFELNATL 302
>gi|225856351|ref|YP_002737862.1| ribonuclease BN [Streptococcus pneumoniae P1031]
gi|225724776|gb|ACO20628.1| ribonuclease BN [Streptococcus pneumoniae P1031]
Length = 286
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLCFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG LL + L ++
Sbjct: 94 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLI 153
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 154 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNISNR 206
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 207 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 266
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 267 LGAVINASM 275
>gi|148992234|ref|ZP_01821957.1| ribonuclease BN, putative [Streptococcus pneumoniae SP9-BS68]
gi|168488338|ref|ZP_02712537.1| ribonuclease BN [Streptococcus pneumoniae SP195]
gi|221231473|ref|YP_002510625.1| ribonuclease BN-like family protein [Streptococcus pneumoniae ATCC
700669]
gi|225854183|ref|YP_002735695.1| ribonuclease BN [Streptococcus pneumoniae JJA]
gi|298230973|ref|ZP_06964654.1| ribonuclease BN [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254128|ref|ZP_06977714.1| ribonuclease BN [Streptococcus pneumoniae str. Canada MDR_19A]
gi|147928860|gb|EDK79872.1| ribonuclease BN, putative [Streptococcus pneumoniae SP9-BS68]
gi|183572912|gb|EDT93440.1| ribonuclease BN [Streptococcus pneumoniae SP195]
gi|220673933|emb|CAR68442.1| ribonuclease BN-like family protein [Streptococcus pneumoniae ATCC
700669]
gi|225723978|gb|ACO19831.1| ribonuclease BN [Streptococcus pneumoniae JJA]
gi|332074462|gb|EGI84938.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA17570]
Length = 286
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLCFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG LL + L ++
Sbjct: 94 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLI 153
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 154 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNISNR 206
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 207 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 266
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 267 LGAVINASM 275
>gi|323466993|gb|ADX70680.1| Methionine aminopeptidase Map [Lactobacillus helveticus H10]
Length = 289
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMR-- 126
P+ ++ I I +L + G + + A + SN V A+R+ NR Y V VE++
Sbjct: 55 PDQVSSFIMPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKLS 114
Query: 127 --SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-------I 177
++ TRLI ++ TL+I+ +F A+ + LA+ ++ + + I I
Sbjct: 115 MLNFLWTRLI-----MVIFTTLMII--IFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKI 167
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
++ R L + + + +++ LP K K I PGV T W+ + LF+ Y+ F
Sbjct: 168 FSYRYPVIFLIIILAVFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFPI 227
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + + + +++L + + F+ G +NA++I
Sbjct: 228 TWKNYGIVGTFIIFMLWLNIASLLFLFGVAVNATII 263
>gi|332992062|gb|AEF02117.1| putative ribonuclease protein [Alteromonas sp. SN2]
Length = 318
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 114/251 (45%), Gaps = 10/251 (3%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ LL++FP + +L G + + + + + ++ P + I +++ +
Sbjct: 39 IAAGVAFYCLLAIFPLLGATISLYGLMVSPEELQNHMALLVNVVPSDSSYIIEEQLKNLT 98
Query: 87 AVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ L F ++ + + SS G AL + N Y R ++ + +
Sbjct: 99 QKSSSALGWGFFLTLFLSLWSSSKGANALITACNITYIEDNGRGFFKGLIARITGTICMI 158
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPA 202
+T+++ +P ++++ + I W +L LF IGL ++ + P
Sbjct: 159 ITVIVALVCITVLPELISWISGGLISFKQASWITW-----PVLLLLFNIGLSALYRYAPH 213
Query: 203 AKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+S + PG +F + W+ + F+ Y+ F++Y+ Y + I+ L++LY+
Sbjct: 214 RRSAQWRWVTPGSLFATLLWIAASYGFSIYLNEFASYNKTYGSVGGIIILLMWLYLSAYI 273
Query: 262 FILGAELNASM 272
++GAE+N+S+
Sbjct: 274 ILIGAEVNSSI 284
>gi|182683583|ref|YP_001835330.1| ribonuclease BN, putative [Streptococcus pneumoniae CGSP14]
gi|182628917|gb|ACB89865.1| ribonuclease BN, putative [Streptococcus pneumoniae CGSP14]
Length = 291
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 43 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 98
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG LL + L ++
Sbjct: 99 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLI 158
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 159 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNLSNR 211
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 212 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 271
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 272 LGAVINASM 280
>gi|301793838|emb|CBW36231.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
INV104]
gi|332204674|gb|EGJ18739.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA47901]
Length = 286
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLCFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG LL + L ++
Sbjct: 94 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLI 153
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 154 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNLSNR 206
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 207 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 266
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 267 LGAVINASM 275
>gi|83949735|ref|ZP_00958468.1| Ribonuclease BN [Roseovarius nubinhibens ISM]
gi|83837634|gb|EAP76930.1| Ribonuclease BN [Roseovarius nubinhibens ISM]
Length = 315
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 116/253 (45%), Gaps = 14/253 (5%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+++ ++ ALLS+FP + + GF G + + DV PE + ++I ++
Sbjct: 16 ISAGVAFYALLSLFPAVTAMVAIWGFAGDPSKLLSQFDVARQFMPEEAYLLVQEQITALI 75
Query: 87 AVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
L IS + + + N AL LN YR ++ ++ ++
Sbjct: 76 VADNTTLQWTTVISLTLSIWSAKNATAALIRGLNSIYREDHRKNPLKRYGVAVALTIVMI 135
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA---LFIGLIFVHLFL 200
++ + +A+P+ALA++ LG + + + +A ++ L GL++ +
Sbjct: 136 AAALVAFALVIALPVALAFLN-----LGIKVEMFVSAAKWAILMGVVLLCFGLLY--RYG 188
Query: 201 PAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
P + +S L PG +F +W G++ F+ Y+ F +++ +Y L +++ L + Y+
Sbjct: 189 PNRRGATVSWLSPGALFALATWAAGSIAFSTYLRNFGSFNEVYGSLGALVALLFWFYISA 248
Query: 260 VFFILGAELNASM 272
++GA +NA +
Sbjct: 249 YVVLIGALINAEL 261
>gi|15900558|ref|NP_345162.1| ribonuclease BN, putative [Streptococcus pneumoniae TIGR4]
gi|148997263|ref|ZP_01824917.1| ribonuclease BN, putative [Streptococcus pneumoniae SP11-BS70]
gi|149002344|ref|ZP_01827286.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS69]
gi|149020271|ref|ZP_01835163.1| ribonuclease BN, putative [Streptococcus pneumoniae SP23-BS72]
gi|168482885|ref|ZP_02707837.1| ribonuclease BN [Streptococcus pneumoniae CDC1873-00]
gi|168487251|ref|ZP_02711759.1| ribonuclease BN [Streptococcus pneumoniae CDC1087-00]
gi|168492815|ref|ZP_02716958.1| ribonuclease BN [Streptococcus pneumoniae CDC3059-06]
gi|168575327|ref|ZP_02721263.1| ribonuclease BN [Streptococcus pneumoniae MLV-016]
gi|169833347|ref|YP_001694130.1| ribonuclease BN [Streptococcus pneumoniae Hungary19A-6]
gi|225858485|ref|YP_002739995.1| ribonuclease BN [Streptococcus pneumoniae 70585]
gi|225860648|ref|YP_002742157.1| ribonuclease BN [Streptococcus pneumoniae Taiwan19F-14]
gi|237650324|ref|ZP_04524576.1| ribonuclease BN, putative [Streptococcus pneumoniae CCRI 1974]
gi|237821691|ref|ZP_04597536.1| ribonuclease BN, putative [Streptococcus pneumoniae CCRI 1974M2]
gi|303254762|ref|ZP_07340863.1| ribonuclease BN, putative [Streptococcus pneumoniae BS455]
gi|303259930|ref|ZP_07345904.1| ribonuclease BN, putative [Streptococcus pneumoniae SP-BS293]
gi|303261335|ref|ZP_07347283.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS292]
gi|303264001|ref|ZP_07349922.1| ribonuclease BN, putative [Streptococcus pneumoniae BS397]
gi|303266315|ref|ZP_07352205.1| ribonuclease BN, putative [Streptococcus pneumoniae BS457]
gi|303268782|ref|ZP_07354570.1| ribonuclease BN, putative [Streptococcus pneumoniae BS458]
gi|307067275|ref|YP_003876241.1| hypothetical protein SPAP_0646 [Streptococcus pneumoniae AP200]
gi|14972130|gb|AAK74802.1| putative ribonuclease BN [Streptococcus pneumoniae TIGR4]
gi|147756963|gb|EDK64003.1| ribonuclease BN, putative [Streptococcus pneumoniae SP11-BS70]
gi|147759659|gb|EDK66650.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS69]
gi|147930573|gb|EDK81555.1| ribonuclease BN, putative [Streptococcus pneumoniae SP23-BS72]
gi|168995849|gb|ACA36461.1| ribonuclease BN [Streptococcus pneumoniae Hungary19A-6]
gi|172043652|gb|EDT51698.1| ribonuclease BN [Streptococcus pneumoniae CDC1873-00]
gi|183569882|gb|EDT90410.1| ribonuclease BN [Streptococcus pneumoniae CDC1087-00]
gi|183576826|gb|EDT97354.1| ribonuclease BN [Streptococcus pneumoniae CDC3059-06]
gi|183578570|gb|EDT99098.1| ribonuclease BN [Streptococcus pneumoniae MLV-016]
gi|225720351|gb|ACO16205.1| ribonuclease BN [Streptococcus pneumoniae 70585]
gi|225727432|gb|ACO23283.1| ribonuclease BN [Streptococcus pneumoniae Taiwan19F-14]
gi|301799695|emb|CBW32260.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
OXC141]
gi|301801520|emb|CBW34212.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
INV200]
gi|302598302|gb|EFL65347.1| ribonuclease BN, putative [Streptococcus pneumoniae BS455]
gi|302637469|gb|EFL67956.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS292]
gi|302638849|gb|EFL69310.1| ribonuclease BN, putative [Streptococcus pneumoniae SP-BS293]
gi|302641647|gb|EFL72006.1| ribonuclease BN, putative [Streptococcus pneumoniae BS458]
gi|302644126|gb|EFL74383.1| ribonuclease BN, putative [Streptococcus pneumoniae BS457]
gi|302646406|gb|EFL76632.1| ribonuclease BN, putative [Streptococcus pneumoniae BS397]
gi|306408812|gb|ADM84239.1| Predicted membrane protein [Streptococcus pneumoniae AP200]
gi|327390387|gb|EGE88728.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA04375]
gi|332075951|gb|EGI86417.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA41301]
gi|332203816|gb|EGJ17883.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA47368]
Length = 286
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG LL + L ++
Sbjct: 94 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLI 153
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 154 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNLSNR 206
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 207 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 266
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 267 LGAVINASM 275
>gi|92119332|ref|YP_579061.1| ribonuclease BN, putative [Nitrobacter hamburgensis X14]
gi|91802226|gb|ABE64601.1| ribonuclease BN, putative [Nitrobacter hamburgensis X14]
Length = 386
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 122/279 (43%), Gaps = 20/279 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + I+ + + EH + +A+A+ ++ +L ++FP + + G +
Sbjct: 78 RRWKDILLRVYANVSEHRI----FALAAGMTYYSLFAIFPALAAMVAVYGLFSDPATIAK 133
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTIS-----ALAAAYFSSNG-VEALRIS 115
D V G P + I Q+ V +KG T+ LA + +S+N +++L +
Sbjct: 134 HFDQVSGFVP---SGAIDVAREQLTRVASKGNQTLGLTFAIGLAVSLWSANAAMKSLFDT 190
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL- 174
LN Y E R + +S + + V ++ V +P+ L YV L N
Sbjct: 191 LNIVYGEKETRGFVKLNAMSLAFTMTGIVFVLAALGAVVVVPVILNYV-----GLSNFAD 245
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
L++ R A + + + L ++ F P ++ + I G I W+ + LF+ Y
Sbjct: 246 LLVRTARWPAMFVGVALALALIYRFGPDREAPRWRWITWGSAVATILWLAASTLFSWYAA 305
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F ++ Y L + + + +L++ + +LGAEL+A M
Sbjct: 306 NFGKFNETYGSLGAAIGFMTWLWISAIVILLGAELDAQM 344
>gi|260575792|ref|ZP_05843788.1| ribonuclease BN [Rhodobacter sp. SW2]
gi|259021945|gb|EEW25245.1| ribonuclease BN [Rhodobacter sp. SW2]
Length = 277
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 71 PEVIAKPITDEILQVLAVPAK--GLFTISALAAAYFSSN-GVEALRISLNRAYRVVE--- 124
P A + D+I ++ P G T+ +L A +S+ G+ AL L+ +R
Sbjct: 71 PHDAAVLVHDQITALITTPKVHLGWATLLSLGIAVYSARAGISALIQGLDVVHRATPRGL 130
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ W++ +++ + T+++ V +PL L +V LL + W A
Sbjct: 131 LQGWWVEFVMTMSLI----TTVLVALATVVIVPLVLNFVTLGVLEGWMLLALPWG----A 182
Query: 185 TMLALFIGLIFVHLFLP-AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L L LI ++ F P + ++ ++PG + W + ++ + Y+ F++Y+ +Y
Sbjct: 183 MVLLLMSCLIILYRFGPNTPQRRVHRVIPGAFLAALVWAMVSIALSAYLANFNSYNRIYG 242
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASM 272
+ +++ L +LY+ +LGA +NA +
Sbjct: 243 SIGAVIALLSWLYLSVWSVLLGAAVNAEI 271
>gi|288962283|ref|YP_003452578.1| ribonuclease BN [Azospirillum sp. B510]
gi|288914549|dbj|BAI76034.1| ribonuclease BN [Azospirillum sp. B510]
Length = 353
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 27/260 (10%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ +S ALL++FP + ++ G + + T + + G P ++D+ +V
Sbjct: 71 LAAGVSYYALLAIFPAVAALVSIFGLVADPAMIETQLSQLRGLLPPEALTIVSDQARKVA 130
Query: 87 AVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA- 142
P++GL L + +S G +L +LN AY E R G+++LA
Sbjct: 131 TAPSQGLGFGLIFGLLLTLWSASRGTNSLVTALNIAYGEKETR----------GFLMLAA 180
Query: 143 -SVTLVIMSFVFVAIPLALAYVR---------KFFPALGNLLLIIWNGRIYATMLALFIG 192
S+ L + +FV + +AL + PA L W +
Sbjct: 181 LSMGLTVAGLLFVIVAMALIIAVPAAIAIVGLQDTPAGWIANLARW---PILAAAIMLAL 237
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+F + + + G + W++G++ F+ Y+ F +Y+ Y + +++ L
Sbjct: 238 AVFYRYAPDRREPRWRWVTWGSAMATMVWLLGSLGFSVYVSNFGSYNETYGSVGAVVILL 297
Query: 253 VFLYMLGVFFILGAELNASM 272
++ + +LGAELNA +
Sbjct: 298 LWFNLTSYVVLLGAELNAEI 317
>gi|58697944|ref|ZP_00372948.1| ribonuclease, BN family [Wolbachia endosymbiont of Drosophila
simulans]
gi|58535551|gb|EAL59534.1| ribonuclease, BN family [Wolbachia endosymbiont of Drosophila
simulans]
Length = 200
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + I ++++ P + L T++ + A + +S+ +E LR LN+AY+V + +
Sbjct: 42 PQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKAYKVPVSPPYIL 101
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML--- 187
R++S I+ F+ + + + L V F + L+ + G Y L
Sbjct: 102 RRVLS------------ILQFLVITLIITLTIV--FSTLVPMLIDFSYQGLSYTRYLLIE 147
Query: 188 -ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
LF + +++ LP K + + PG I W + A F Y+
Sbjct: 148 FVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQYL 193
>gi|161507147|ref|YP_001577101.1| hypothetical protein lhv_0656 [Lactobacillus helveticus DPC 4571]
gi|160348136|gb|ABX26810.1| Predicted membrane protein [Lactobacillus helveticus DPC 4571]
Length = 307
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMR- 126
+P+ ++ I I +L + G + + A + SN V A+R+ NR Y V VE++
Sbjct: 72 FPDQVSSFIMPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKL 131
Query: 127 ---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI------- 176
++ TRLI ++ TL+I+ +F A+ + LA+ ++ + + I
Sbjct: 132 SMLNFLWTRLI-----MVIFTTLMII--IFTAVGVVLAFGQELLDLMDAIFKIPVHEVGK 184
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I++ R L + + + +++ LP K K I PGV T W+ + LF+ Y+ F
Sbjct: 185 IFSYRYPVIFLIIILAVFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFP 244
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + + + +++L + + F+ G +NA++I
Sbjct: 245 ITWKNYGIVGTFIIFMLWLNIASLLFLFGVAVNATII 281
>gi|158313101|ref|YP_001505609.1| ribonuclease BN [Frankia sp. EAN1pec]
gi|158108506|gb|ABW10703.1| ribonuclease BN [Frankia sp. EAN1pec]
Length = 360
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLI 176
AY E+RS +RL++ G L T V++ V P L+ + P + +LL I
Sbjct: 181 AYGQRELRSAVRSRLLALGLFLAQVATGVLLLPALVLGPGLLSDMLNSGRHPVVDDLLKI 240
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
++ + LA+ L HL LP +S LPG W+VG+ L Y+
Sbjct: 241 LFWPVVGVVSLAMLTTLY--HLALPVRRS-WRRALPGAALALFLWLVGSYLLRMYLELVF 297
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ +Y L + + L+F Y+ + +LGAELNA++
Sbjct: 298 SNELVYGSLGAPVAALLFFYITALAVLLGAELNAAI 333
>gi|188580068|ref|YP_001923513.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179343566|gb|ACB78978.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 386
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 122/261 (46%), Gaps = 29/261 (11%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
++A+ ++ LLS+FP I G + + + + G PE I + QV
Sbjct: 110 SVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLHGVLPESAIDIIGE---QV 166
Query: 86 LAVPAKGLFTI-----SALAAAYFSSNG-VEALRISLNRAYRVVEMRS--WYITRLISFG 137
+ AKG T+ ++L + +S+N ++A+ +LN Y E R+ W R ++F
Sbjct: 167 KRISAKGSGTLGVTFFTSLTLSLWSANAAMKAMFDALNVVYEEEEKRNFFWLNVRSLTFT 226
Query: 138 -----YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+++LA +++V++ VF F LG+ +I R +L L G
Sbjct: 227 GGALLFIILALMSIVVLPVVF------------NFLGLGDGARLIAMARWPVLLLVLLGG 274
Query: 193 LIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ + P+ +++ + G + + W+ ++LF+ Y+ F Y+ Y L +++
Sbjct: 275 LAVLYRYGPSRERARWRWVGAGSVVAGLLWLAASILFSWYVANFGNYNETYGSLGAVIGF 334
Query: 252 LVFLYMLGVFFILGAELNASM 272
+ ++++ +LG E+NA +
Sbjct: 335 MTWIWISATIVLLGGEINAEI 355
>gi|209696335|ref|YP_002264266.1| ribonuclease BN [Aliivibrio salmonicida LFI1238]
gi|226736667|sp|B6EGQ7|Y2938_ALISL RecName: Full=UPF0761 membrane protein VSAL_I2938
gi|208010289|emb|CAQ80622.1| tRNA-processing ribonuclease BN [Aliivibrio salmonicida LFI1238]
Length = 310
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 37/247 (14%)
Query: 35 ALLSVFP-FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
++LS FP F G + F+ FVP D V G+ E I+ ++ AV + L
Sbjct: 52 SVLSQFPIFSGAGETVQEFV-IQNFVPAASDAVEGSLKEFISN-----TGKMTAVGSGFL 105
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS--------WYITRLISFGYVLLASVT 145
F S + + A+ SLN +RV + R W I L LL +
Sbjct: 106 FVASVML--------ISAIDRSLNYIWRVKKKRRPMYSFSLYWMILTLGP----LLVWAS 153
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
L S+V + V F+ L L II + + F+GL +L +P K
Sbjct: 154 LAATSYVTSLNIMDDEIVSSFYRTLLGWLPIILS-------FSAFLGL---YLLVPNKKI 203
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++ L G + + V V F YI F +Y +Y LA++ V++Y+ + ++G
Sbjct: 204 RVRHALVGAMSAGCLFEVSKVGFAQYITQFPSYEVIYGALAAVPILFVWIYLCWIIVLIG 263
Query: 266 AELNASM 272
AE+ AS+
Sbjct: 264 AEITASL 270
>gi|168492268|ref|ZP_02716411.1| ribonuclease BN [Streptococcus pneumoniae CDC0288-04]
gi|183573531|gb|EDT94059.1| ribonuclease BN [Streptococcus pneumoniae CDC0288-04]
Length = 286
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG LL + L ++
Sbjct: 94 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLI 153
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 154 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYAFLFAI---LVMLYYFLPNLSNR 206
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 207 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 266
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 267 LGAVINASM 275
>gi|167644948|ref|YP_001682611.1| ribonuclease BN [Caulobacter sp. K31]
gi|167347378|gb|ABZ70113.1| ribonuclease BN [Caulobacter sp. K31]
Length = 414
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 118/251 (47%), Gaps = 9/251 (3%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
A+A ++ LL++FP I +L G V + + +P + I +++L++
Sbjct: 104 AVAGGVTFYTLLAIFPAIGAFVSLYGLFADIGGVEKQLREMSSVFPASVVNIIGEQMLRL 163
Query: 86 LAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ L F +S L + + ++ ++AL LN AY E R++ ++ + A
Sbjct: 164 ASQEQAKLGVAFVVSLLLSIWSANASMKALFDGLNVAYDEDEKRNFVAKTAWTYAFTFCA 223
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
V VI++ V + P+ + + A + + W + T A + ++ F P
Sbjct: 224 LVYAVILAGVLIGAPIVMERI-GLSAAAAVWIPLRWLIVLAVTAFAFAM----LYRFAPC 278
Query: 203 -AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
A+ + ++ G +F +W++G++ F+ Y+ + Y Y L +++ +V+++ +
Sbjct: 279 RARPRWRWVIWGAVFGAAAWLLGSLGFSLYVNNIAHYDATYGPLGAVIAFMVWMWFSILT 338
Query: 262 FILGAELNASM 272
++GAELNA +
Sbjct: 339 VLIGAELNAEI 349
>gi|332995314|gb|AEF05369.1| hypothetical protein ambt_19390 [Alteromonas sp. SN2]
Length = 294
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 36/288 (12%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFG----------ANLAGFLGA-- 55
V D+ I+ E++ A H++ LLS+ PFI+ A++ G L
Sbjct: 17 VVDLFTIFIKRCREDNITISAGHLAYVTLLSLVPFIMVTFTIMSAFPAFASVRGKLEYFI 76
Query: 56 -HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+ FVPT D V + ++D + + A G+ ++ +A S+ +
Sbjct: 77 FNNFVPTASDTVH--------EYMSDFVGNASEMGAIGILSLLVVALMLISN-----VDK 123
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA--LAYVRKFFPALGN 172
+LNR +R R T I + + L L+I S V ++ LA A+ ++ P LG
Sbjct: 124 TLNRIWRTQSDRPIVYTFAIYWMVITLGP--LLIGSSVIISSYLAGLAAFAEEYTPGLGT 181
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
LL + +A MLA FI +++ +P + + G I +++ + F YI
Sbjct: 182 FLLTLVPS--FAAMLAFFI----LYMIVPNRRVFARHAISGAILATVAFELTKSGFALYI 235
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
F +Y +Y LA + +++Y+ + +LGAE S+ + +K
Sbjct: 236 TNFPSYELIYGALAVVPILFLWVYISWILVLLGAEFTCSLGQAFENRK 283
>gi|313892387|ref|ZP_07825979.1| YihY family protein [Dialister microaerophilus UPII 345-E]
gi|313119246|gb|EFR42446.1| YihY family protein [Dialister microaerophilus UPII 345-E]
Length = 281
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 117/263 (44%), Gaps = 14/263 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I ++ F+++D A A+ + +L + PF+VF N F A Q VI P
Sbjct: 14 IKHMVKRFIKDDVTAFAAESTYYFILGLVPFLVFFTNAILFFAAPQI--QVIIKFLHYLP 71
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA-YRVVEMRSWYI 130
+ + + + I +++ + I A + SS G+ + ++++ ++ +++W
Sbjct: 72 QQLEVSMAENIYRIIQGRSTVWLAIGLFGALWTSSQGINVIIRAMDKIFFKNRNIQNWIT 131
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ S + LL + +L I+S + AL YV ++ + + L IWN YA +
Sbjct: 132 VSIKSLLFTLLITFSL-ILSLGMIVFANALIYVIAYYFGIPEMFLEIWNIAKYAIPFIMM 190
Query: 191 I-GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL-----FTHYIVTFSTYSTMYAG 244
I L + F PA K + P ++ T + +V G +L + +YI+ S Y
Sbjct: 191 IFSLAAFYRFAPAKKC---ATWPVILVTSL-FVTGILLLLTGIYGYYILEISKMGATYGS 246
Query: 245 LASIMTCLVFLYMLGVFFILGAE 267
L ++ ++ + + + G+E
Sbjct: 247 LIGLVVLFIWFRLASMVILTGSE 269
>gi|256851526|ref|ZP_05556915.1| methionine aminopeptidase Map [Lactobacillus jensenii 27-2-CHN]
gi|260660949|ref|ZP_05861864.1| methionine aminopeptidase Map [Lactobacillus jensenii 115-3-CHN]
gi|256616588|gb|EEU21776.1| methionine aminopeptidase Map [Lactobacillus jensenii 27-2-CHN]
gi|260548671|gb|EEX24646.1| methionine aminopeptidase Map [Lactobacillus jensenii 115-3-CHN]
Length = 286
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L S+FP I+ N+ + P V++ +++G P +A I + VL + G
Sbjct: 35 LFSMFPIIIIAGNI---MPLFHLKPEVVEEYLIYGL-PTKVADFIMPIVKSVLQKQSTGY 90
Query: 94 FTISALAAAYFSSNGVEALRISLNRAY--RVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
+ L A + S+ A+RIS+NR Y R E+R + +L+ G V+L + ++I+
Sbjct: 91 ISFGILIALWSFSSLTNAMRISMNRIYGVRQQELRFSFGRKLLERGVVVLITGLMIIL-- 148
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNG-------RIYATMLALFIGLIFVHLFLPAAK 204
+ +AL + ++ ++ L I + G + + + + + + + LP K
Sbjct: 149 -LTVLTIALTFGQEILDSVKAFLGINYLGIESIFTYKWLVLLAVMLVVIAYFNFALPNVK 207
Query: 205 SKIMSILPGVIFTWISWVVGAVLF----THYIVTFSTYS 239
+ +I PGV + W + LF +H+ ++F Y
Sbjct: 208 KRKRAIWPGVFINLVGWAGLSYLFGLYLSHFKLSFENYG 246
>gi|289642410|ref|ZP_06474556.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
gi|289507755|gb|EFD28708.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
Length = 299
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
HL LP+ + LPG + + W VG+ L Y+ T + +Y +A+ + L+F Y
Sbjct: 200 HLSLPS-RRPWRRALPGALLAMVVWNVGSYLLRLYLGTVIDHELIYGSVAAPVAALLFFY 258
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
+ + +LGAELNA++ + P
Sbjct: 259 ITALAVLLGAELNAAIDEHSGHTPP 283
>gi|111225044|ref|YP_715838.1| hypothetical protein FRAAL5685 [Frankia alni ACN14a]
gi|111152576|emb|CAJ64318.1| Conserved hypothetical protein; putative membrane protein [Frankia
alni ACN14a]
Length = 453
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 11/167 (6%)
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLL-L 175
AY + RS +RL++ G L + VI+ + P ++ + P++ +LL L
Sbjct: 203 AYGQRDRRSAVRSRLVALGLFLAQVTSGVIILPALILGPGLISRILDADQHPSVDHLLTL 262
Query: 176 IIWN--GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ W G + TML HL LP + LPG + W+VG+ + Y+
Sbjct: 263 LFWPVVGLVALTMLT-----SLYHLSLPV-RRPWWRALPGATLALVCWLVGSDVLRLYLE 316
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ +Y L + + L+F Y+ + +LGAELNA++ +++
Sbjct: 317 IVFSHELVYGSLGAPVAALLFFYITALAVLLGAELNAALDEQSSQRR 363
>gi|149005772|ref|ZP_01829511.1| ribonuclease BN, putative [Streptococcus pneumoniae SP18-BS74]
gi|307126852|ref|YP_003878883.1| ribonuclease BN [Streptococcus pneumoniae 670-6B]
gi|147762712|gb|EDK69672.1| ribonuclease BN, putative [Streptococcus pneumoniae SP18-BS74]
gi|306483914|gb|ADM90783.1| ribonuclease BN [Streptococcus pneumoniae 670-6B]
gi|332077084|gb|EGI87546.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA17545]
Length = 286
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG +L + L ++
Sbjct: 94 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQILFAFALFLI 153
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 154 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNLSNR 206
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 207 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 266
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 267 LGAVINASM 275
>gi|77919575|ref|YP_357390.1| hypothetical protein Pcar_1979 [Pelobacter carbinolicus DSM 2380]
gi|77545658|gb|ABA89220.1| tRNA-processing RNAse BN [Pelobacter carbinolicus DSM 2380]
Length = 479
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 18/275 (6%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANL-AGFLGAHQFVPTVIDVVFGAWPEVI 74
+ FV + AS ++ + LLS+ P + +L GF G + P + + EV+
Sbjct: 67 VRGFVSDGCMLRASALTYATLLSIVPLLALMFSLIKGFGGQNVLEPLLFKIFTHGSGEVV 126
Query: 75 AKPIT-DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
++ E + GL + A S+ + S N + V E RS R
Sbjct: 127 GAILSYIENTNFRRLGTVGLVILVATVLTLLSN-----IEKSFNHIWGVKETRS-LTRRF 180
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGRIYATMLALFI 191
+ V+L S L++ + V++ +G LL+++N Y LA++
Sbjct: 181 ADYFSVVLLSPLLIVAALSLTTTLRNQVLVQRLLETAVIGEALLLLFNVLPY---LAVWA 237
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
F++LF+P + ++ L G +F W + + ++ + S Y+ +Y +A++
Sbjct: 238 AFTFMYLFMPNTRVQLGPALVGGVFGGTLWQLAQWAYVNFQIGVSKYNAIYGTMAALPIL 297
Query: 252 LVFLYMLGVFFILGAEL-----NASMIIYYWRKKP 281
+V+LY+ + +LG EL NA+++ + ++P
Sbjct: 298 IVWLYVSWMIVLLGLELTYAMQNATILREEYSEEP 332
>gi|111656939|ref|ZP_01407757.1| hypothetical protein SpneT_02001818 [Streptococcus pneumoniae
TIGR4]
Length = 269
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 21 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 76
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG LL + L ++
Sbjct: 77 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLI 136
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 137 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNLSNR 189
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 190 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 249
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 250 LGAVINASM 258
>gi|148989029|ref|ZP_01820429.1| ribonuclease BN, putative [Streptococcus pneumoniae SP6-BS73]
gi|147925526|gb|EDK76603.1| ribonuclease BN, putative [Streptococcus pneumoniae SP6-BS73]
gi|332202534|gb|EGJ16603.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA41317]
Length = 286
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG L + L ++
Sbjct: 94 LSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLI 153
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 154 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNLSNR 206
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 207 KISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 266
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 267 LGAVINASM 275
>gi|77165113|ref|YP_343638.1| ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|254433289|ref|ZP_05046797.1| Ribonuclease BN-like family [Nitrosococcus oceani AFC27]
gi|76883427|gb|ABA58108.1| tRNA-processing RNAse BN [Nitrosococcus oceani ATCC 19707]
gi|207089622|gb|EDZ66893.1| Ribonuclease BN-like family [Nitrosococcus oceani AFC27]
Length = 447
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 109 VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-- 166
++ + + N +R+ R ++ R + VLL LV + A + ++++
Sbjct: 135 IQKVEGAFNHVWRIKAERP-FVRRFSDYLSVLLIGPVLVFSAVGATASVMQTSFIQTLLE 193
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
F LG L+++ Y ++ G FV+LFLP K K+ S + G + I W +
Sbjct: 194 FELLGKTLVVVSKLLPYLLVIG---GFTFVYLFLPNTKVKLGSAVVGGVVAGILWESIGI 250
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
LF ++ T + Y +Y+ LA ++ +++LY+ + ++GA+ + Y+ + P
Sbjct: 251 LFAFFVATSTKYDAIYSSLAILILFMIWLYISWLILLVGAQ------VAYYHQNP 299
>gi|170078320|ref|YP_001734958.1| ribonuclease BN-like family protein [Synechococcus sp. PCC 7002]
gi|169885989|gb|ACA99702.1| Ribonuclease BN-like family [Synechococcus sp. PCC 7002]
Length = 399
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 170 LGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L NLL+I+W LA+ I F++ + K M ILPG + +SW + + LF
Sbjct: 266 LANLLVILWRFLSLPVALAIVSIAFAFIYSMGSSRLIKGMPILPGAVLGAVSWAIISSLF 325
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
Y+ F Y+ +Y + + + +++L + + +LG +LN
Sbjct: 326 RLYVANFGQYNRVYGAVGTAIILMLWLQLSALVMLLGDQLN 366
>gi|15902618|ref|NP_358168.1| ribonuclease BN, putative [Streptococcus pneumoniae R6]
gi|15458153|gb|AAK99378.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
Length = 291
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 43 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 98
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG L + L ++
Sbjct: 99 LSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLI 158
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 159 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNLSNR 211
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 212 KISYTLPGSAFVLLVILGVLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 271
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 272 LGAVINASM 280
>gi|313904998|ref|ZP_07838369.1| ribonuclease BN [Eubacterium cellulosolvens 6]
gi|313470255|gb|EFR65586.1| ribonuclease BN [Eubacterium cellulosolvens 6]
Length = 296
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 7/193 (3%)
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
++++ + L IS + + +S G AL LN AY V E R + ++S
Sbjct: 88 SKLIREAYAKSHDLLPISVVTLIWAASQGTVALLRGLNEAYHVKEHRRYLELLILS---- 143
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW---NGRIYATMLALFIGLIFV 196
++ + L+ + +V + + V F + L + W R+ + + + +
Sbjct: 144 IIYTAGLIFLVYVMMTVVFGNQIVDFFQEHMPWLSVPTWFYHRSRVAISFVLAILIFSLL 203
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ PA K LPG +FT + W + F YI F+ Y+ Y L ++ + ++Y
Sbjct: 204 YKLAPAGYRKFSRQLPGAVFTAVVWEIFTFFFQMYIGGFNRYTMFYGSLGTLAIFMFWMY 263
Query: 257 MLGVFFILGAELN 269
F++G +N
Sbjct: 264 CCFYIFLVGGYIN 276
>gi|332877623|ref|ZP_08445367.1| YihY family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684472|gb|EGJ57325.1| YihY family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 299
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 110/248 (44%), Gaps = 4/248 (1%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
AS I+ S L++FPF++F NL ++ F + G P + +D +
Sbjct: 49 ASAIAYSFFLAIFPFLLFILNLIPYIPIDHFQVDFWVFIDGLLPPGTHQFFSDIFFDIAE 108
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
L + + + +NG+ A+ +Y + R++ L + ++ S+ ++
Sbjct: 109 KRRGSLLSSVFFLSIFLMTNGIMAIFGGFEFSYHIQLTRTYVKQYLYALMVAIILSLLVL 168
Query: 148 IMSFVFVAIPLALA-YVRKF-FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
+ F+ + L Y+ + F LL + A M + ++F + +S
Sbjct: 169 FVVITFMGYEIYLVPYLEEINFLTDNETLLKVSKLGFVAVMTYIATSILFYFGTIEGRES 228
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
K S+ G FT I + V LF YI FS Y+ +Y + +++ L+++++ +LG
Sbjct: 229 KFFSV--GSTFTTILFGVTTYLFGIYIENFSQYNQLYGSIGALLIFLLYIWINSNILLLG 286
Query: 266 AELNASMI 273
ELNA+++
Sbjct: 287 FELNATLL 294
>gi|295397716|ref|ZP_06807788.1| YihY family protein [Aerococcus viridans ATCC 11563]
gi|294974045|gb|EFG49800.1| YihY family protein [Aerococcus viridans ATCC 11563]
Length = 329
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 4/243 (1%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIAKPITDEILQVL 86
A+ +S LLS+FP ++ AN+ L F P +V+ ++ P+ + I + L
Sbjct: 29 AAEMSYYFLLSLFPLLMMIANIIPML---PFDPDSVVGLLETLLPDQVEPIIVPTLESYL 85
Query: 87 AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
+ G ++S + + S ++ LNR Y + + ++ I+RL SF + +
Sbjct: 86 SSDTTGALSVSFILILWSGSTAFGTVQNILNRTYGITDKPNFIISRLFSFAIAFVLVIFA 145
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
V +S +FV L V +F L I + + +L L + F++ F+P K
Sbjct: 146 VALSVLFVFGQTLLEAVNQFIDVPMQLFDIFTSVKWPILLLVLILVFTFIYQFIPHHKYP 205
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ +PG + + V + F+ Y+ F S + + +++L++ + I+GA
Sbjct: 206 LKFAVPGAVVATLLSAVLSSGFSFYVNNFGGSSVSNGTIGVFIVLMIYLWLTSIVLIVGA 265
Query: 267 ELN 269
+N
Sbjct: 266 MIN 268
>gi|119487571|ref|ZP_01621181.1| Ribonuclease BN [Lyngbya sp. PCC 8106]
gi|119455740|gb|EAW36876.1| Ribonuclease BN [Lyngbya sp. PCC 8106]
Length = 420
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F P+ + ++PG I ISW V + LF Y+ F Y+ Y + + + L++
Sbjct: 324 LIYRFGPSKRQPETPLVPGAILAAISWAVISNLFRLYVTHFGNYNLTYGAIGAFIILLLW 383
Query: 255 LYMLGVFFILGAELNASM 272
LY+ + ++GA++N ++
Sbjct: 384 LYISSLVMLIGAQVNVTV 401
>gi|282932763|ref|ZP_06338169.1| putative ribonuclease [Lactobacillus jensenii 208-1]
gi|297206340|ref|ZP_06923735.1| possible ribonuclease BN [Lactobacillus jensenii JV-V16]
gi|281303119|gb|EFA95315.1| putative ribonuclease [Lactobacillus jensenii 208-1]
gi|297149466|gb|EFH29764.1| possible ribonuclease BN [Lactobacillus jensenii JV-V16]
Length = 286
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L S+FP I+ N+ + P V++ +++G P +A I + VL + G
Sbjct: 35 LFSMFPIIIIAGNI---MPLFHLKPEVVEEYLIYGL-PTKVADFIMPIVKSVLQKQSTGY 90
Query: 94 FTISALAAAYFSSNGVEALRISLNRAY--RVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
+ L A + S+ A+RIS+NR Y R E+R + +L+ G V+L + ++I+
Sbjct: 91 ISFGILIALWSFSSLTNAMRISMNRIYGVRQQELRFSFGRKLLERGVVVLITGLMIIL-- 148
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNG-------RIYATMLALFIGLIFVHLFLPAAK 204
+ +AL + ++ ++ L I + G + + + + + + + LP K
Sbjct: 149 -LTVLTIALTFGQEILDSVKAFLGINYLGIESIFTYKWLVLLAVMLVVIAYFNFALPNVK 207
Query: 205 SKIMSILPGVIFTWISWVVGAVLF----THYIVTFSTYS 239
+ +I PGV + W + LF +H+ ++F Y
Sbjct: 208 KRKRAIWPGVFINLVGWSGLSYLFGLYLSHFKLSFENYG 246
>gi|269925355|ref|YP_003321978.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
gi|269789015|gb|ACZ41156.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
Length = 319
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 117/287 (40%), Gaps = 41/287 (14%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV---- 65
D++ + E+ A+ ++ + ++FPF+ F L LG V V D
Sbjct: 30 DLLKQVWKEASEDHLGDFAASLTYHGIFAIFPFLTF---LISMLGIFDKVLGVFDTSQLI 86
Query: 66 --------VFGAWPEVIAKPITDEILQVLAVPAKGLFT----ISALAAAYFSSNGVEALR 113
V A P + + +I +++ G FT +S L A + S ++
Sbjct: 87 KDFLSRPQVRQAIPVEVIDFVQQQIDRLIGNIRPGTFTTGAIVSVLLALWGVSGAFRSIM 146
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
SLN Y + + R + LIS +++S + V + L+ + F P + +
Sbjct: 147 ESLNVVYEIKDSRPIWKKYLIS-----------IMLSVIAVLLLLSAGILAVFGPKIADW 195
Query: 174 L--------LIIWNGRIYA---TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
L L W+ +I +L + ++ + P K + + PG I + W+
Sbjct: 196 LARTTGLGTLFAWSWKIAQWPLLILIALLAFALIYHYGPDIKQPLRLVTPGSILALLGWL 255
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
V ++F+ Y+ F Y+ Y LA + ++++Y ++G E+N
Sbjct: 256 VFTLIFSLYVNNFGNYNKTYGTLAGAILLMLYMYYSSYILLMGGEVN 302
>gi|94497190|ref|ZP_01303762.1| putative ribonuclease protein [Sphingomonas sp. SKA58]
gi|94423295|gb|EAT08324.1| putative ribonuclease protein [Sphingomonas sp. SKA58]
Length = 303
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 24/257 (9%)
Query: 29 SHISL-------SALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
+HISL A LS+ P ++ G +G Q V + + P+ AK I ++
Sbjct: 36 NHISLLSAGVAYYAFLSIAPLLLAVVLTYGLIGDPQLVADNVRSLITVVPQEAAKLIYEQ 95
Query: 82 ILQVLAV--PAKGLFTISALA-AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
++ ++ PA GL I ALA A Y ++ A +LN Y E RS + +S G
Sbjct: 96 LMAIVTTTKPAVGLGLIFALAFAVYGATRASSATIEALNIIYEQTEARSIFAFYRVSLGI 155
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGRIYATMLALFIGLIF 195
A + +V+ A V F L N + I I + +F LIF
Sbjct: 156 TFSAVLVVVVGVLT--------ASVIGFLETLTNGWGQIAIFLTKAITWIVAGMFASLIF 207
Query: 196 --VHLFLP-AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ F P K++ + G + + W++ + + Y+ F Y+ Y L +++
Sbjct: 208 ALIYRFGPHRRKARWRWLTAGSVTATVLWLLSTLAVSFYVSKFGNYNETYGSLGAVVVLQ 267
Query: 253 VFLYMLGVFFILGAELN 269
++LY+ +LGA+LN
Sbjct: 268 LWLYVSAFVVLLGAQLN 284
>gi|254381761|ref|ZP_04997125.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340670|gb|EDX21636.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 379
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 26/277 (9%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ +L++FP ++ +L G G V+D V
Sbjct: 49 VLRGTLKEFKDDELADRAAALTYYGVLALFPALLVLVSLIGLAG-ESATKEVLDNVQKLA 107
Query: 71 PEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P +TD + Q+ G L I L A +S++G + A + N Y + E R
Sbjct: 108 PGSARDVVTDAVQQIQGHSGVGSLLAIVGLVVAVWSASGYIAAFIRASNAVYDMPEGRP- 166
Query: 129 YITRLISFGYVLLASVTLVIM---SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ +++S L +VTL+++ S + V LA +G+ L +W+ +
Sbjct: 167 -VWKVLSLRMAL--TVTLMVLACASALIVVFSGNLARQVGSSLGIGDTALTVWS-IVKWP 222
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS---------WVVGAVLFTHYIVTFS 236
+L + + ++ L+ A +K G F W+S W+ + F Y+ F
Sbjct: 223 VLVILVTIMIALLYWAAPNAK------GRGFKWVSPGSFLALAIWMAASAGFAFYVANFG 276
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y+ Y LA ++ LV+L++ + +LG E +A ++
Sbjct: 277 SYNKTYGTLAGVIVFLVWLWITNLAILLGLEFDAELV 313
>gi|116516563|ref|YP_816069.1| ribonuclease BN, putative [Streptococcus pneumoniae D39]
gi|116077139|gb|ABJ54859.1| ribonuclease BN, putative [Streptococcus pneumoniae D39]
Length = 286
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG L + L ++
Sbjct: 94 LSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLI 153
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 154 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNLSNR 206
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG F + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 207 KISYTLPGSAFVLLVILGVLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 266
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 267 LGAVINASM 275
>gi|325955208|ref|YP_004238868.1| ribonuclease BN [Weeksella virosa DSM 16922]
gi|323437826|gb|ADX68290.1| ribonuclease BN [Weeksella virosa DSM 16922]
Length = 328
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 38/256 (14%)
Query: 38 SVFPFIVFGANLA---------GFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI-LQVLA 87
S+FPFI+F +L L HQF+P +I P I K + I +
Sbjct: 60 SLFPFILFLFSLLPKIPHYEELKLLLFHQFLPQII-------PNSIGKEVIGYIDITTQQ 112
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
K + + + SSNGV+ + N +Y+ V +I R + L S+ L
Sbjct: 113 QEQKSVNWWFMIFTIFMSSNGVQGIINGFNVSYQDV-----FIKR--NNNKQRLISLILT 165
Query: 148 IMSFVFVAIPLALAYVR----------KFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
I VF+ + L L Y KFF L +I + + ++ F+ + ++
Sbjct: 166 IFFTVFLILQLTLLYYTGIIWKYLAETKFFFDLSKSSRLI---NMTSVIMFYFLSMCMLY 222
Query: 198 LFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P + K S ++PG + + + ++ F Y+ F+ +Y L +M ++F+Y
Sbjct: 223 HYGPNNQDKSKSTVVPGAVLSTLLFITTLFGFNVYLKHFNNLDLLYGSLGLVMLVMIFVY 282
Query: 257 MLGVFFILGAELNASM 272
+ + ++G ELN S+
Sbjct: 283 VNVIILLVGYELNMSL 298
>gi|313890733|ref|ZP_07824358.1| YihY family protein [Streptococcus pseudoporcinus SPIN 20026]
gi|313120834|gb|EFR43948.1| YihY family protein [Streptococcus pseudoporcinus SPIN 20026]
Length = 319
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 112/246 (45%), Gaps = 19/246 (7%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP I+ AN+ +L + +++++ + P I KP + + + PA +
Sbjct: 44 ILTVFPLIIIAANIFPYLNID--ISDLLNLMKQSLPVDIYKPAASIVTNIFSKPAGSILG 101
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
++ LA + S + +L+ ++N+AY + R + ++ +I +L++ L +++FV +
Sbjct: 102 MATLAGLWTMSRSLTSLQKAINKAYGASQHRDFLVSHIIG---LLISVFILFLLTFVLIF 158
Query: 156 IPLALAYVR---KFFPALGNL----LLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKI 207
+ A ++ K + N+ LL+I I + + + ++ LP K KI
Sbjct: 159 STFSKAAIQVIDKHYHLSDNITSLFLLLIQPITIVIIFIGIMV----LYFLLPNVKIRKI 214
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFILG 265
ILPG T + + +Y+V SIM ++ L+ L I G
Sbjct: 215 RYILPGTFLTAFVMTFMSNMLANYVVHSVERMVDIKMFGSIMIFIIMLWFIFLARILIFG 274
Query: 266 AELNAS 271
A NA+
Sbjct: 275 AICNAT 280
>gi|302548984|ref|ZP_07301326.1| ribonuclease BN family membrane protein [Streptomyces
viridochromogenes DSM 40736]
gi|302466602|gb|EFL29695.1| ribonuclease BN family membrane protein [Streptomyces
viridochromogenes DSM 40736]
Length = 389
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 6/267 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ +L++FP ++ ++ G G V++ V
Sbjct: 89 VLKGSLREFKDDELTDRAAALTYYGVLAMFPALLVLVSILGLTG-RSTTDKVLENVQQFA 147
Query: 71 PEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P IT + Q+ G L + L A +S++G V A S N Y + E R
Sbjct: 148 PGSARDIITRAVEQLQGNAGVGSLMAVVGLVLAVWSASGYVAAFIRSANAVYDIPEGRPV 207
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G ++ V L + S + V LA +G+ L +W+ + ++
Sbjct: 208 WKLLPVRVGVTVVLMV-LAVFSALIVVFTGGLARQAGSVLGIGDTALTVWSIAKWPVLVV 266
Query: 189 LFIGLIFV-HLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +I + + P AK K I PG + + W+V + F Y+ F++Y+ Y +A
Sbjct: 267 LVTIMIAILYWATPNAKVKGFRWITPGSVLALLIWLVASAGFAVYVANFASYNKTYGTMA 326
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
++ LV+L++ + +LG E +A +
Sbjct: 327 GVIVFLVWLWITNLAILLGLEFDAETV 353
>gi|116626071|ref|YP_828227.1| ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
gi|116229233|gb|ABJ87942.1| ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
Length = 275
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 28/223 (12%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
RE+ ++I + +E + A IS S LLS FPF +L L P
Sbjct: 9 REHL----ELIRPTARYIMETEAHVYALAISASVLLSFFPFCNVMLSLCRML----HWPA 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAY 120
+ ++ A + + + + LA+ +G ++++ F++NG+ E L ++LNRA+
Sbjct: 61 AEEAIYLALRDYFPGELAGFLKRNLAL--QGHLQLTSMVLLLFTANGIFEPLEVALNRAW 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNL 173
+ RS+ +LI+ G + + L ++S +F A ALA V+ F
Sbjct: 119 GITRNRSYLKNQLIALGMIFICG-ALAMLSLMFTAFNRQWLGAWSALAPVQSFLN----- 172
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIF 216
LLI + ++LALF+ V+ LP K + P I+
Sbjct: 173 LLIFKIAAVPISILALFL----VYWLLPNRKISPSRVAPAAIY 211
>gi|54293627|ref|YP_126042.1| hypothetical protein lpl0680 [Legionella pneumophila str. Lens]
gi|53753459|emb|CAH14914.1| hypothetical protein lpl0680 [Legionella pneumophila str. Lens]
Length = 412
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 127/289 (43%), Gaps = 59/289 (20%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP--EV 73
I+HF+++D +AS ++ ++LL+V P + G +F ++P +
Sbjct: 22 IQHFIQDDCTYIASALAFTSLLAVVPLMSVGL-----------------AIFSSFPVFQG 64
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI------------------- 114
+A+P+ + I VPA G S L F+S V L I
Sbjct: 65 LAEPVQNFIFDNF-VPATGKIVQSYLQQ--FTSQ-VSKLSIWGIVFLIFTALLVMFTIER 120
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASV----TLVIMSFVFVAIPLALAYVRKFFPAL 170
++N+ +RV R L+ + + LA V +L S++F ++P+ LA R + L
Sbjct: 121 AMNKIWRVSSSRQGVSAFLLYWAIISLAPVLLGLSLAASSYLF-SMPI-LADHRAPYTIL 178
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
Y+ IG F+++ +P KI G + I + F +
Sbjct: 179 H-----------YSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAY 227
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y++ ++TY+ +Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 228 YLIRYNTYALLYGAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|94971210|ref|YP_593258.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
gi|94553260|gb|ABF43184.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
Length = 269
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 28/271 (10%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGAWP 71
+D I + E + A ++ +A+LS FPF+V + + Q VI ++ P
Sbjct: 8 WDTIRYMTETEVHTYAFSVAANAILSFFPFVVLMLTICRRAFHSQQMYEVVISLLRDYLP 67
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEMRSWYI 130
+ + ++ LA A G + +LA +S G+ L ++LN+ + + + RS+
Sbjct: 68 S--NQDFVIKNMRFLA-SAHGKAQVFSLAMLLVTSTGIFLPLEVALNKVWGIHKNRSYLA 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYV---RKFFPALGNLLLIIWNGRIYATML 187
+L+S G + LA TL + S A L + V + F A G +++ + I ATML
Sbjct: 125 NQLLSLG-LALACGTLAMGSVALTAGNLKMLGVVVGYQNFVARGTSFIVMKSIAILATML 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH-----YIVTFS--TYST 240
F+ ++ LP K +++P I + GA FT YI+ +
Sbjct: 184 IFFL----IYWILPNGKVPWRAVMPAAI------IAGA--FTEAAKYIYILLLPWLDFQA 231
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y A +T +++ Y+ G+ + GA L+AS
Sbjct: 232 VYGPFAISVTLMIWAYVSGMLLLGGAHLSAS 262
>gi|332186510|ref|ZP_08388254.1| hypothetical protein SUS17_1621 [Sphingomonas sp. S17]
gi|332013493|gb|EGI55554.1| hypothetical protein SUS17_1621 [Sphingomonas sp. S17]
Length = 385
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 96 ISALAAAYFSSNGV-EALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV 154
+++L A FS+ +L +N AYR+ R + R I+ ++L LV+ + V +
Sbjct: 196 LASLGIALFSARRAGRSLLHGINLAYRIDRERR-GLRRQIASTLLVLGCAALVLTALVSL 254
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYATML---ALFIG----LIFVHLFLPAAKSKI 207
++ LA+++ + P + R +T+L +L +G L+ ++ + PAA+ I
Sbjct: 255 SV---LAFLKSYVPD------GLPGARTASTILLFGSLTLGAGGALLLIYRYAPAAEEPI 305
Query: 208 --MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++PG I W+ LF Y+ + + Y L++++ +++L + +LG
Sbjct: 306 PWRRVVPGTIAAVAMWLGATTLFRAYVAHVARFDDTYGSLSAVIVLMLWLLVSAWALLLG 365
Query: 266 AELNAS 271
A LNA
Sbjct: 366 ARLNAE 371
>gi|308177256|ref|YP_003916662.1| ribonuclease BN-like protein [Arthrobacter arilaitensis Re117]
gi|307744719|emb|CBT75691.1| ribonuclease BN-like protein [Arthrobacter arilaitensis Re117]
Length = 376
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWPEV 73
+I F + +A+ ++ A+LS+FP ++ +L G G A ++ ++ +
Sbjct: 51 SIREFSRKKCTDLAASLTYFAMLSIFPALLAVVSLLGVAGQAENMTRNILSLIQELASKE 110
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITR 132
+ + + I Q+ + P+ GL ++ L A +S++G V A ++N+ Y V E R +Y R
Sbjct: 111 VVETLRQPIEQLASAPSAGLALVAGLLGALWSASGYVGAFGRAMNQIYEVYEGRPFYKLR 170
Query: 133 LISFGYVLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ L+ V + ++ + V+ PLA A LG + IWN + ++ I
Sbjct: 171 PLMLALTLVLLVAVSVLGMLLIVSGPLAQAIGNVL--GLGESAVAIWNIAKWPVIVLCAI 228
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWIS---------WVVGAVLFTHYIVTFSTYSTMY 242
L+ V L+ A K F W+S V V F Y+ F Y+ Y
Sbjct: 229 VLVAV-LYYGAPNVKQPK------FRWVSLGSAIALLVLAVATVGFFFYVSNFGNYNKTY 281
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ ++ L++L++ + + GA +A
Sbjct: 282 GAIGGVIVLLLWLWIANLSLLFGAVFDAE 310
>gi|213962463|ref|ZP_03390725.1| ribonuclease BN [Capnocytophaga sputigena Capno]
gi|213954789|gb|EEB66109.1| ribonuclease BN [Capnocytophaga sputigena Capno]
Length = 303
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 111/254 (43%), Gaps = 16/254 (6%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
AS IS S L++FPF++F NL ++ F + P +D +
Sbjct: 52 ASAISYSFFLAIFPFLLFILNLIPYIPIDDFQVDFWGFIDDMLPPGTHDFFSDIFFDIAE 111
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
GL + + + +NG+ A+ +Y R++ L Y L+ ++ L
Sbjct: 112 KKRGGLLSSVFFLSIFLMTNGIMAIFGGFEFSYHRQITRTYVKQYL----YALMVAIILS 167
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNL-------LLIIWNGRIYATMLALF-IGLIFVHLF 199
++ V A+ + Y FP L + L+ + ++ ++ F G++F
Sbjct: 168 LL--VLFAVVTFIYYEIYLFPYLDKINFITDYETLLKISKIVFVALITYFGTGVLFYFGT 225
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
+ +SK S G + T + + + LF YI FS Y+ +Y + +++ L+++++
Sbjct: 226 VEGKESKFFS--AGSLLTVLLFGLTTFLFGIYIENFSQYNQLYGSIGALLIFLLYIWINA 283
Query: 260 VFFILGAELNASMI 273
+LG ELNAS++
Sbjct: 284 NILLLGFELNASLL 297
>gi|295690772|ref|YP_003594465.1| ribonuclease BN [Caulobacter segnis ATCC 21756]
gi|295432675|gb|ADG11847.1| ribonuclease BN [Caulobacter segnis ATCC 21756]
Length = 403
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 118/267 (44%), Gaps = 9/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + A+A ++ LL++ P I +L G + V + + G
Sbjct: 84 DIVWRTWREITVDRLPAVAGGVTFYTLLALIPAIGAFVSLYGLFADVRTVEQQLRDMAGV 143
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+P + + + +++L++ + L F S L + + ++ + L LN AY E R
Sbjct: 144 FPPSVVQIVGEQMLRLASQGEAKLGLAFAFSLLLSVWSANASMRTLFDGLNIAYDEEEKR 203
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
L+S+ + A V V +S V + PL L R AL + I R M
Sbjct: 204 HIVRRTLLSYAFTFCALVYAVAVSAVLIVTPLLLKAAR--LSALDSYWAPI---RWLMVM 258
Query: 187 LALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ ++ F P+ A+++ + G W++G++ F+ Y+ + + Y L
Sbjct: 259 AMTAVAFAVLYRFAPSRAQARWRWVWIGAATASGGWLIGSLGFSTYVNRVAHFDAAYGPL 318
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
+I+ +V+++ + ++GAELNA +
Sbjct: 319 GAIIAFMVWVWFSIMAILVGAELNAEI 345
>gi|149372594|ref|ZP_01891706.1| ribonuclease BN, putative [unidentified eubacterium SCB49]
gi|149354637|gb|EDM43201.1| ribonuclease BN, putative [unidentified eubacterium SCB49]
Length = 313
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 29/267 (10%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
AS I+ S +++FPF++F NL ++ F + + A P A I +
Sbjct: 55 ASSIAYSFFVALFPFLLFILNLLPYIKIEGFQTRFLIFIEEALPAQTADLFYPVIADIAV 114
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
P GL + + + + ++NGV A + +Y V R ++ + Y S+ L
Sbjct: 115 NPRGGLLSFVIILSLFLAANGVNAAFSAFEESYYVTLNRGFFK----QYAYAFAVSLLLA 170
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI------------- 194
++ + V + + Y G L+ GR Y +I L+
Sbjct: 171 LLLIITVGV---IVY--------GEFLINDLAGRAYIENDFFWISLLQVSVFVVMVYVAV 219
Query: 195 -FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F KI G + T + ++V LF YI FS Y+ +Y L +++ ++
Sbjct: 220 ATLYYFGTRESRKIRFFSLGALITTLLFIVTTYLFGIYINNFSNYNELYGSLGALLIMML 279
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++++ +LG ELN ++ ++K
Sbjct: 280 YIWINANLLLLGFELNITLFKLDVKRK 306
>gi|58336949|ref|YP_193534.1| hypothetical protein LBA0624 [Lactobacillus acidophilus NCFM]
gi|227903506|ref|ZP_04021311.1| possible ribonuclease BN [Lactobacillus acidophilus ATCC 4796]
gi|58254266|gb|AAV42503.1| predicted membrane protein [Lactobacillus acidophilus NCFM]
gi|227868393|gb|EEJ75814.1| possible ribonuclease BN [Lactobacillus acidophilus ATCC 4796]
Length = 308
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++VF P+ ++ I + +L + G + + A + SN V A+R+ NR Y V
Sbjct: 68 LNIVF---PDQVSSFIMPIVNSLLKTTSTGYMSFGIVLAIWSFSNLVNAIRLGENRLYGV 124
Query: 123 --VEMRSWYITRLISFGYVLLASV---TLVIMSFVFVAIPLALAY-VRKFFPALGNL--- 173
+E+R +I+F + + +V L+I+ F F +I L V F + NL
Sbjct: 125 HQIELR----LSIINFIWTRVITVVFTALMIIIFTFASIVLVFGQQVLNFLKPITNLPVE 180
Query: 174 -LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ +++ R +L + + + +++ LP K K + PGV T I W+ + LF+ Y+
Sbjct: 181 EISRVFSYRYPVVLLMMVLAVFYLNYVLPNIKLKKRVVWPGVFATVIGWLALSFLFSFYL 240
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
F Y + + + +++L + F+ G +NA++I
Sbjct: 241 HHFPITWENYGIVGTFIIFMLWLNIAAFLFLFGVAVNAAII 281
>gi|299138188|ref|ZP_07031368.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
gi|298600118|gb|EFI56276.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
Length = 330
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
LPG + + W V ++F Y+ F+ YS +Y L + + + +LY++ + + GAE NA
Sbjct: 251 LPGAMVATLLWFVSTLIFGLYVTRFANYSRVYGSLGAAIALMFWLYIIALCVLAGAEFNA 310
Query: 271 SMIIYYWRKKP 281
++ + P
Sbjct: 311 QLVAHRRNSDP 321
>gi|160880810|ref|YP_001559778.1| ribonuclease BN [Clostridium phytofermentans ISDg]
gi|160429476|gb|ABX43039.1| ribonuclease BN [Clostridium phytofermentans ISDg]
Length = 266
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
F P K ++ SI G I T I WV+ F Y+ F+ YS +Y + + + ++LY++
Sbjct: 179 FTPNLKVRVRSISIGAIITAIGWVITTWGFEVYMKLFNNYSALYGSIGAFLGLTLWLYIV 238
Query: 259 GVFFILGAELN 269
+ + GAE+N
Sbjct: 239 SIVLLCGAEIN 249
>gi|52840880|ref|YP_094679.1| ribonuclease BN [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|81378036|sp|Q5ZXT8|Y643_LEGPH RecName: Full=UPF0761 membrane protein lpg0643
gi|52627991|gb|AAU26732.1| ribonuclease BN [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 412
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 127/289 (43%), Gaps = 59/289 (20%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP--EV 73
I+HF+++D +AS ++ ++LL+V P + G +F ++P +
Sbjct: 22 IQHFIQDDCTYIASALAFTSLLAVVPLMSVGL-----------------AIFSSFPVFQG 64
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI------------------- 114
+A+P+ + I VPA G S L F+S V L I
Sbjct: 65 LAEPVQNFIFDNF-VPATGKIVQSYLQQ--FTSQ-VSKLSIWGIVFLIFTALLVMFTIER 120
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASV----TLVIMSFVFVAIPLALAYVRKFFPAL 170
++N+ +RV R L+ + + LA V +L S++F ++P+ LA R + L
Sbjct: 121 AMNKIWRVSSSRHGVSAFLLYWAIISLAPVLLGLSLAASSYLF-SMPI-LADHRAPYTIL 178
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
Y+ IG F+++ +P KI G + I + F +
Sbjct: 179 H-----------YSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAY 227
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y++ ++TY+ +Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 228 YLIRYNTYALLYGAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|307609441|emb|CBW98931.1| hypothetical protein LPW_07171 [Legionella pneumophila 130b]
Length = 412
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 127/289 (43%), Gaps = 59/289 (20%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP--EV 73
I+HF+++D +AS ++ ++LL+V P + G +F ++P +
Sbjct: 22 IQHFIQDDCTYIASALAFTSLLAVVPLMSVGL-----------------AIFSSFPVFQG 64
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI------------------- 114
+A+P+ + I VPA G S L F+S V L I
Sbjct: 65 LAEPVQNFIFDNF-VPATGKIVQSYLQQ--FTSQ-VSKLSIWGIVFLIFTALLVMFTIER 120
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASV----TLVIMSFVFVAIPLALAYVRKFFPAL 170
++N+ +RV R L+ + + LA V +L S++F ++P+ LA R + L
Sbjct: 121 AMNKIWRVSSSRHGVSAFLLYWAIISLAPVLLGLSLAASSYLF-SMPI-LADHRAPYTIL 178
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
Y+ IG F+++ +P KI G + I + F +
Sbjct: 179 H-----------YSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAY 227
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y++ ++TY+ +Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 228 YLIRYNTYALLYGAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|163789761|ref|ZP_02184198.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
gi|159874983|gb|EDP69050.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
Length = 329
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 121/267 (45%), Gaps = 14/267 (5%)
Query: 14 DAIEHFVE--EDGWAMASHISLSA------LLSVFPFIVFGANLAGF--LGAHQFVPTVI 63
D + +E + WA A S +A LLS+FP ++ AN+ + A +P +
Sbjct: 12 DKFKSLIEVVKPNWARAEVSSNAAELAYFTLLSLFPILLVIANIIPLFPINASDILPMLE 71
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V V+A P+ + L + A + I++L +A S AL+ LN Y V
Sbjct: 72 TAVPPDIYNVLA-PVLESYLSSSSGGAISIGLITSLWSA---SKAFNALQNVLNDVYGVE 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ ++ I RL+SF L+ + + F+FV L +++ F +L+L ++ +
Sbjct: 128 KRNNFIIVRLVSFLVQLVIVAIVGALIFIFVFGEQILLFIQDFIGIDLSLILQVFGYKWL 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ L + + V+ +P + I LPG IF + W++ + FT Y+ + A
Sbjct: 188 VLLVVLILVITMVYFLVPNHRLHIKYALPGAIFATVGWLILSQAFTLYVKYAGGEAAASA 247
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA 270
+ +++LY+ + ++G +N
Sbjct: 248 TFGVFIVLMLWLYLSAIILLIGGLINT 274
>gi|29827533|ref|NP_822167.1| ribonuclease BN family membrane protein [Streptomyces avermitilis
MA-4680]
gi|29604633|dbj|BAC68702.1| putative membrane protein, ribonuclease BN-like family
[Streptomyces avermitilis MA-4680]
Length = 393
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 122/267 (45%), Gaps = 10/267 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVF 67
++ ++ F +++ A+ ++ +L++FP ++ +L G G + + V +
Sbjct: 93 VLKGSLREFKDDELTDRAAALTYYGVLALFPALLVLVSLLGITGKSTTDKVLTNVQKLAP 152
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G+ ++I + + E LQ A + I + A + +S V A + N Y + E R
Sbjct: 153 GSARDIITRAV--EQLQNNAGTGSVVAIIGLVLAVWSASGYVAAFIRASNAVYDIPEGRP 210
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I G ++ V L ++S + V LA +G+ L +W+ + +L
Sbjct: 211 VWKILPIRVGVTVVLMV-LAVISALIVVFTGGLARQAGDALGIGDTALTVWSIAKWP-VL 268
Query: 188 ALFIGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + L+ L+ + +K+ I PG + W++ + F Y+ F++Y+ Y
Sbjct: 269 VILVTLMIAILYWASPNAKVKGWRWITPGSFLALVIWMIASAGFAFYVANFASYNKTYGT 328
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
+A ++ LV+L++ + +LG E +A
Sbjct: 329 MAGVIVFLVWLWITNLAILLGLEFDAE 355
>gi|329121368|ref|ZP_08249994.1| YihY family protein [Dialister micraerophilus DSM 19965]
gi|327469777|gb|EGF15243.1| YihY family protein [Dialister micraerophilus DSM 19965]
Length = 265
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 116/259 (44%), Gaps = 14/259 (5%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
++ F+++D A A+ + +L + PF+VF N F A Q VI P+ +
Sbjct: 2 VKRFIKDDVTAFAAESTYYFILGLVPFLVFFTNAILFFAAPQI--QVIIKFLHYLPQQLE 59
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA-YRVVEMRSWYITRLI 134
+ + I +++ + I A + SS G+ + ++++ ++ +++W +
Sbjct: 60 VSMAENIYRIIQGRSTVWLAIGLFGALWTSSQGINVIIRAMDKIFFKNRNIQNWITVSIK 119
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI-GL 193
S + LL + +L I+S + AL YV ++ + + L +WN YA + I L
Sbjct: 120 SLLFTLLITFSL-ILSLGMIVFANALIYVIAYYFGIPEMFLEMWNIAKYAIPFTMMIFSL 178
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL-----FTHYIVTFSTYSTMYAGLASI 248
+ F PA K + P ++ T + +V G +L + +YI+ S Y L +
Sbjct: 179 AAFYRFAPAKKC---ATWPVILVTSL-FVTGILLLLTGIYGYYILEISKMGATYGSLIGL 234
Query: 249 MTCLVFLYMLGVFFILGAE 267
+ ++ + + + G+E
Sbjct: 235 VVLFIWFRLASMVILTGSE 253
>gi|291165672|gb|EFE27720.1| YihY family protein [Filifactor alocis ATCC 35896]
Length = 298
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 119/264 (45%), Gaps = 27/264 (10%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAWPEVIA 75
+ +V ++ + ++ +LS+FPF++ + G LG + + + +P+ +
Sbjct: 29 KRYVADNLSQLGGQLAYFFILSLFPFLI---AVNGILGRFDLNIKEQLGNLSHFFPDNVI 85
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + + +F +S + + +++ + +L SLN A+R R +S
Sbjct: 86 YVLQQYLSHLSHSDHNKMFVMSMIIMIWMATSAIRSLLFSLNHAFRS--------ERPLS 137
Query: 136 FGYVLLASVTLVIMSFVFVAIPL--------ALAYVRKFFPALGNLLLIIWNGRIYATML 187
L AS LV++ +F+ + L A V +FF L +W +I ++
Sbjct: 138 LQKQL-ASFPLVVLMILFIFVSLISSSIGKNACETVLRFF-KLNQDWTDVW--QIIRWII 193
Query: 188 ALF--IGLIFV-HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
F + ++F+ + +P + G +F+ W+V +++ + Y F YS +Y
Sbjct: 194 PFFGVVTIVFLLYNIIPDRNFPRKYTIIGALFSVSLWIVTSMILSFYTSNFGRYSIIYGS 253
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
L +I+ L+FLY G+ +LG EL
Sbjct: 254 LGAIIIMLLFLYWSGIIIVLGGEL 277
>gi|148360703|ref|YP_001251910.1| ribonuclease BN [Legionella pneumophila str. Corby]
gi|288559231|sp|A5IGR4|Y2650_LEGPC RecName: Full=UPF0761 membrane protein LPC_2650
gi|148282476|gb|ABQ56564.1| ribonuclease BN [Legionella pneumophila str. Corby]
gi|158512137|gb|ABW69098.1| ribonuclease BN [Legionella pneumophila]
Length = 412
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 126/289 (43%), Gaps = 59/289 (20%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP--EV 73
I+HF+++D +AS ++ ++LL+V P + G +F ++P +
Sbjct: 22 IQHFIQDDCTYIASALAFTSLLAVVPLMSVGL-----------------AIFSSFPVFQG 64
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI------------------- 114
+A+P+ + I VPA G S L F+S V L I
Sbjct: 65 LAEPVQNFIFDNF-VPATGKIVQSYLQQ--FTSQ-VSKLSIWGVVFLIFTALLVMFTIER 120
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASV----TLVIMSFVFVAIPLALAYVRKFFPAL 170
++N+ +RV R L+ + + LA V +L S++F ++P+ LA R + L
Sbjct: 121 AMNKIWRVSSSRHGVSAFLLYWAIISLAPVLLGLSLAASSYLF-SMPI-LADHRAPYTIL 178
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
Y+ IG F+++ +P KI G + I + F +
Sbjct: 179 H-----------YSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAY 227
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y++ ++TY +Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 228 YLIRYNTYELLYGAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|126736136|ref|ZP_01751879.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
gi|126714302|gb|EBA11170.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
Length = 315
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 103 YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY 162
Y +S G+ +L +N AY +E R + +L + G LL + L+I +A+P+A+
Sbjct: 116 YSASKGMGSLMDGMNVAYDEIEERGFIRLKLETLGLTLLLIIGLLIGLSAMIAVPVAINA 175
Query: 163 VR--KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWI 219
+ LG +++I + LA+ + + P+ + M PG I
Sbjct: 176 LSLGVVTETLGTVVVIAVLLGLTLVGLAVL------YRYGPSRDAAEMQWATPGAIAACF 229
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
W++G+ F Y+ F +Y+ + L ++ L++L++ ILGAELNA M
Sbjct: 230 LWLLGSAGFAFYVANFGSYNESFGALGGVVILLMWLWISAYVIILGAELNAEM 282
>gi|315503112|ref|YP_004081999.1| ribonuclease bn [Micromonospora sp. L5]
gi|315409731|gb|ADU07848.1| ribonuclease BN [Micromonospora sp. L5]
Length = 340
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 22/270 (8%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVV--FGAWPEV 73
+ FV ++ A+ ++ +L++FP + L G + + V TVID+ GA V
Sbjct: 38 KGFVTDNCADWAAALTYYGVLALFPSTIVVVALVGLVSDGPRTVDTVIDLAREIGAGSVV 97
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ V+ AK L + L A + +S + A + N Y V E R +Y
Sbjct: 98 GNDAFVGVVRNVVEQQGSAKVLLSFGLLGALWSASGFIGAFTRASNAIYGVREGRPFYRL 157
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL------LIIWNGRIYAT 185
R + G +A+VT+V+++ V L A+G+LL W+ +
Sbjct: 158 RPLQIG---MAAVTIVLLAVVATG----LIVSGPVTDAVGDLLHAGAVARTTWSVAKWP- 209
Query: 186 MLALFIGLIFVHLFLPAA---KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+LA+ + LF A + + + PG ++WV+ + F Y+ F +Y Y
Sbjct: 210 LLAVVAMTLLSLLFWIAPNVRQPRFRWLTPGGALALVAWVLASFGFGLYVANFGSYDVTY 269
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
L +++ LV+LY+ +LG ++NA +
Sbjct: 270 GSLGAVIAFLVWLYLSNCALMLGVQVNAEL 299
>gi|225872705|ref|YP_002754162.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
gi|225793213|gb|ACO33303.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
Length = 279
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
++L+VFP ++ L FL ++ ++ P A+ I + L
Sbjct: 36 SVLAVFPAMILILALLPFLSIPHLQQAILQLLHQVLPAQAARLFDGTIDYLSEHKRNALL 95
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV 154
S + + +S+GV +L LN V + R ++ +R G +L + +++ + +
Sbjct: 96 VFSVIFTLWSASSGVFSLMEQLNLICDVTDRRPFWKSR----GTAILLMLFFYLVTILSL 151
Query: 155 AIPLALAYVRKFFPAL--GNLLLIIWNG--RIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
++ + L ++ + + N LL+ + R A + + F P A+ + +
Sbjct: 152 SLVIGLGALQDWLATMLGRNWLLLGFFATLRWIVLAAATLLAFAVAYRFGPDARIRFRFL 211
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
PG IF + + ++ F Y+ FS+YS MY LA+I+ +V++Y+ G+ + G E+++
Sbjct: 212 SPGNIFAAVMVALISIGFRFYVGHFSSYSAMYGSLAAIIILMVWMYLAGIAVLTGWEIDS 271
>gi|54296667|ref|YP_123036.1| hypothetical protein lpp0698 [Legionella pneumophila str. Paris]
gi|53750452|emb|CAH11846.1| hypothetical protein lpp0698 [Legionella pneumophila str. Paris]
Length = 412
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 126/289 (43%), Gaps = 59/289 (20%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP--EV 73
I+HF+++D +AS ++ ++LL+V P + G +F ++P +
Sbjct: 22 IQHFIQDDCTYIASALAFTSLLAVVPLMSVGL-----------------AIFSSFPVFQG 64
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI------------------- 114
+A+P+ + I VPA G S L F+S V L I
Sbjct: 65 LAEPVQNFIFDNF-VPATGKIVQSYLQQ--FTSQ-VSKLSIWGIVFLIFTALLVMFTIEQ 120
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASV----TLVIMSFVFVAIPLALAYVRKFFPAL 170
++N+ +RV R L+ + + LA V +L S++F ++P+ LA R + L
Sbjct: 121 AMNKIWRVSSSRHGVSAFLLYWAIISLAPVLLGLSLAASSYLF-SMPI-LADHRAPYTIL 178
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
Y+ IG F+++ +P KI G + I + F +
Sbjct: 179 H-----------YSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAY 227
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y++ ++TY +Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 228 YLIRYNTYELLYGAFAAVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|254411294|ref|ZP_05025071.1| YihY family protein [Microcoleus chthonoplastes PCC 7420]
gi|196181795|gb|EDX76782.1| YihY family protein [Microcoleus chthonoplastes PCC 7420]
Length = 312
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 121/250 (48%), Gaps = 10/250 (4%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP--TVIDVVFGAWPEVIAKPITDEIL 83
+++S ++ +A+L++FP I+ + QF P D + PE + + +
Sbjct: 35 SLSSQMAYNAMLALFPAILVIFTVIELF--KQFFPWTNPADQLGEVAPEQAMELMRNFAE 92
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISFGYVLL 141
+ +GLF++S + A + SS + A +L++ ++ + R ++ +LI+ G L
Sbjct: 93 GINLTDNRGLFSLSFIMAIWVSSGALNAAMNALDQINQIPSEKTRPFWKAKLIAMGLTLG 152
Query: 142 ASVTLVIMSFVFVAIPLALAYVR-KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L I SF+ + V K + LL + + I +++A+ +I+ F
Sbjct: 153 SVLLLFIASFILFISNWVVNLVEYKSIVVILLTLLRLLSWLIALSLVAIVFAIIY--RFG 210
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIMTCLVFLYMLG 259
+ + ILPG + + W + + +F +Y+ + FS Y +Y L +++ ++LYM
Sbjct: 211 ISHWRQGTPILPGAVLAAVLWAIVSGVFRNYVASNFSNYHKIYGALGAVIVLQLWLYMTS 270
Query: 260 VFFILGAELN 269
+ +LG +LN
Sbjct: 271 LVVLLGDQLN 280
>gi|160933187|ref|ZP_02080576.1| hypothetical protein CLOLEP_02032 [Clostridium leptum DSM 753]
gi|156868261|gb|EDO61633.1| hypothetical protein CLOLEP_02032 [Clostridium leptum DSM 753]
Length = 145
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF+ L+ ++ +P + ++PG + +SW+V ++ F Y+ YS +Y + +
Sbjct: 46 LFMVLLTLYYLVPNRLYTVRQVMPGTFASLLSWLVFSIGFAFYVENMGRYSVVYGSIGAA 105
Query: 249 MTCLVFLYMLGVFFILGAELN 269
+ L++LY + I+GAELN
Sbjct: 106 IVLLLWLYFSAITLIMGAELN 126
>gi|56552587|ref|YP_163426.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762169|ref|ZP_04760252.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|260753757|ref|YP_003226650.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|56544161|gb|AAV90315.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373419|gb|EER63019.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|258553120|gb|ACV76066.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 340
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 133/319 (41%), Gaps = 59/319 (18%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF--------GANLAGFL 53
R+ + F II + V +G+ A + + ALL++FPF++ G AGF
Sbjct: 19 RKRYAAFFRII-KQVASGVINNGFPHAGNFAYMALLTLFPFMILTIIVASTIGRGAAGFA 77
Query: 54 GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
F+ A P ++ ++ I QVL+ + L SAL + + S + ++R
Sbjct: 78 AVRSFL--------SALPPNVSSQLSGPIFQVLSTKSGSLIWWSALVSLWSVSGFIASIR 129
Query: 114 ISLNRAYRVVEMRSWYITRL----ISFGYVLLASVTLVI------------------MSF 151
L R Y + + RL I+ G VL+ + L I M +
Sbjct: 130 ELLYRTYHMEPPTEFIRYRLGAMAINIGAVLMMFIILSIQVLIATLQNVFSQRFGWVMEY 189
Query: 152 VFVAIP-LALAYVRKFFPALGNLLLIIWNGRIYA-----TMLALFI-----GLIFVHLFL 200
A+P ++L+ L L+ + + RI+A T+L++ GL+F L++
Sbjct: 190 AKAALPHISLSDNHSLIDQLN--LIGLTSDRIHAFFEHITILSIISRVISGGLLFGALYV 247
Query: 201 -------PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
P + PG T W + +++ + Y+ Y GLA + L+
Sbjct: 248 LFYSITPPQYRKARYYKWPGAFLTAFWWQMVSMILPIALNNMLDYNRSYGGLAGSVIVLI 307
Query: 254 FLYMLGVFFILGAELNASM 272
+ +++G+ ++G LNA++
Sbjct: 308 YFWIIGLGLVVGIHLNATL 326
>gi|298506496|gb|ADI85219.1| membrane-bound transcriptional regulator, ribonuclease BN-related
[Geobacter sulfurreducens KN400]
Length = 438
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 117/264 (44%), Gaps = 25/264 (9%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFG-ANLAGFLGAHQFVPTVIDVVFGAWPEV 73
A+ +F+++ AS ++ S LLS+ PF A L G + P ++D V E+
Sbjct: 41 AVGNFMDDQCLLHASALTYSTLLSIVPFFALAFAVLKGLGVQNTLEPFILDQVAAGSHEI 100
Query: 74 IAKPIT-DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT- 131
+ + +T +V ++ A GL T+ + + + N + V E RS Y
Sbjct: 101 VDRIVTYINNTKVGSLGAVGLVTLVVSTVTLLGN-----IEETFNSIWGVRETRSLYRRF 155
Query: 132 ----RLISFGYVLL---ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ FG +L+ SVT + S V + AY LG++L+ + Y
Sbjct: 156 SDYLSVVVFGPILIFAAISVTTTLESQKAVQWLIGTAY-------LGDVLVAAFRLVPY- 207
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+++++ L+F+++ +P K + S L G + W + H+ V + Y+ +Y
Sbjct: 208 --ISIWLALVFLYMLIPNTKVRFRSALVGGVIAGTLWQAAQWGYIHFQVGVAKYNAIYGT 265
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
LA + +++LY + G E+
Sbjct: 266 LAVLPVFMIWLYASWSIVLFGVEV 289
>gi|312194341|ref|YP_004014402.1| ribonuclease BN [Frankia sp. EuI1c]
gi|311225677|gb|ADP78532.1| ribonuclease BN [Frankia sp. EuI1c]
Length = 360
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 127/275 (46%), Gaps = 24/275 (8%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + F E+ A+ ++ ++L++FP ++ +L G +G TV+D +
Sbjct: 43 VLRRTVAEFNEDALSDRAAALTYYSILAIFPALLVLVSLLGVIG-QSATTTVLDNLQNLT 101
Query: 71 PEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMR-S 127
P ++ + V G + I LA A +S++G V A + N Y + E R +
Sbjct: 102 PASARDVVSGAVDGVRGSAGTGSVLAIVGLAGALWSASGYVAAFIRAANAVYDIPEGRPA 161
Query: 128 WYITRL---ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLLIIWNGRI 182
W I L ++ ++LA+++ VI+ F + R+ ALG + +W+
Sbjct: 162 WKIAPLRIGLTVALMVLAALSAVIVVF-------SGKVARQAGSALGIGQTAVDVWS--- 211
Query: 183 YAT--MLALFIGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFST 237
YA +L +F+ L+ L+ A + + PG + W+V + F Y+ F +
Sbjct: 212 YAKWPVLVVFVILMIAILYWAAPNVRHQGFRWLTPGTVLALAIWMVASAAFAFYVSNFGS 271
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ Y +A ++ LV+L++ + +LG E +A +
Sbjct: 272 YNKTYGAVAGVIIFLVWLWLTNLAILLGLEFDAEL 306
>gi|254424387|ref|ZP_05038105.1| YihY family protein [Synechococcus sp. PCC 7335]
gi|196191876|gb|EDX86840.1| YihY family protein [Synechococcus sp. PCC 7335]
Length = 311
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 126/263 (47%), Gaps = 35/263 (13%)
Query: 26 AMASHISLSALLSVFPFI--------VFGANLAGFLGAHQFVPTVIDVVFGAWPEVI--- 74
++AS ++ +++L +FP I +F + FL Q + +V PE+I
Sbjct: 32 SLASEMAYNSMLGLFPAILALFTAIGIFSPLQSTFLKLAQ---QLSEVAPAGVPELIYGF 88
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITR 132
+TD+ P++GLF++S A + SS + A +L++ ++ R ++ R
Sbjct: 89 EAVVTDQ-------PSRGLFSVSFAFALWASSGAMSAAMRALDQMQQIPIRRRRPFWKAR 141
Query: 133 LISFGYVLLASVTLVIMSFVFV-----AIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L+S + L ++ L+I + FV A+ + Y R +G+ + W + L
Sbjct: 142 LVSI-TLTLGTIALLISASCFVFISEWAVGQLIYYSRG---DIGSWMAKAWGYSRWPLAL 197
Query: 188 ALFI-GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
++ F++ F P+ + I+PG + +SW V + LF Y+ F + +Y+ +A
Sbjct: 198 SIMSSAFAFIYRFGPSRWTPGKPIMPGAVLAALSWAVISSLFRLYVAHFGNF--VYSAVA 255
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
+++ L++L++ + ++G LN
Sbjct: 256 TVIVLLLWLWLTSLVMLIGDLLN 278
>gi|332701683|ref|ZP_08421771.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
gi|332551832|gb|EGJ48876.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
Length = 373
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 31/268 (11%)
Query: 25 WAMASHISLS---------ALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
WA S +LS A+L++FP I ++ G L + + I V G P
Sbjct: 86 WAEQSKDNLSLVAAGVAFYAMLALFPAIAALISIYGLLADPAQLQSQIGEVSGVLPGDAR 145
Query: 76 KPITDEILQVLAVPAKGLFTISA----LAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I ++ +V++ A G ++ A L A + +S G++ L +LN +Y E R
Sbjct: 146 SIIQSQLSKVVSG-AGGALSLGAAVGLLLALWSASKGMKGLIQALNISYGEEESR----- 199
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWN---GRIYAT 185
G++ L +++L++ + LAL V L NL L ++W R
Sbjct: 200 -----GFLKLNAISLLLTVSGLIFFILALTAVVAMPALLDNLGLPDAVMWTVSIARWPLL 254
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
LA + L ++ + P + G ++W+ ++LF+ Y+ F Y+ Y
Sbjct: 255 ALAGMLALAVLYRYAPDRDEPRWRWVSWGSAGATMAWIAASLLFSLYVSQFGNYNETYGT 314
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM 272
L +++ L +L++ +LGAELNA M
Sbjct: 315 LGAVVILLTWLFLTAYVVLLGAELNAEM 342
>gi|332523215|ref|ZP_08399467.1| YihY family protein [Streptococcus porcinus str. Jelinkova 176]
gi|332314479|gb|EGJ27464.1| YihY family protein [Streptococcus porcinus str. Jelinkova 176]
Length = 319
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 19/246 (7%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+L+VFP I+ AN+ +L + +++++ + P I KP + + + PA +
Sbjct: 44 ILTVFPLIIIAANIFPYLNID--ISDLLNLMKQSLPVDIYKPAASIVTNIFSKPAGSILG 101
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
++ +A + S + +L+ ++N+AY + R + ++ +I +L++ L +++FV +
Sbjct: 102 MATVAGLWTMSRSLTSLQKAINKAYGASQHRDFLVSHIIG---LLISVFILFLLTFVLIF 158
Query: 156 IPLALAYVR---KFFPALGNL----LLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKI 207
+ A ++ K + N+ LL+I I + + + ++ LP K KI
Sbjct: 159 STFSKAAIQVIDKHYHLSDNITSLFLLLIQPITIVIIFIGIMV----LYFLLPNVKIRKI 214
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFILG 265
ILPG T + + +Y+V SIM ++ L+ L I G
Sbjct: 215 RYILPGTFLTAFVMTFMSNMLANYVVHSVERMVDIKMFGSIMIFIIMLWFIFLARILIFG 274
Query: 266 AELNAS 271
A NA+
Sbjct: 275 AICNAT 280
>gi|222053928|ref|YP_002536290.1| ribonuclease BN [Geobacter sp. FRC-32]
gi|221563217|gb|ACM19189.1| ribonuclease BN [Geobacter sp. FRC-32]
Length = 440
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFG-ANLAGFLGAHQFV 59
++ Y+ I+ I++F +++ AS +S + +LS+ PF A L GF ++
Sbjct: 26 IKRYWVKYLQIMALVIKNFWDDNCLLRASALSFTTILSIVPFFALTFAVLKGFDVQNKVE 85
Query: 60 PTVIDVVFGAWPEVIAKPIT-DEILQVLAVPAKGLFTISALAAAYFSS-----N---GVE 110
P +++ V E++ K +T + ++ GL T+ A + N GV+
Sbjct: 86 PYILEQVTAGSEELVDKIVTYINNTNMTSMGTIGLATLVVTAITLLGNIEEAFNVIWGVK 145
Query: 111 ALRISLNRAYRVVEMRSWYITRLISFGYVLLA--SVTLVIMSFVFVAIPLALAYVRKFFP 168
R SL R + S Y++ L+S ++LA SVT + S V L +Y
Sbjct: 146 GTR-SLQRKF------SDYLSVLLSGPLLMLAAISVTTTLQSQSVVRWLLQTSY------ 192
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
LG++LL + Y +++++ L F+++ +P + K S L G + W +
Sbjct: 193 -LGDVLLFSFRLIPY---ISVWLALFFLYILIPNTRVKAKSALIGGVLAGTVWQAAQWGY 248
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
++ V Y+ +Y LA + +V++Y V + G E+ A+
Sbjct: 249 LYFQVGVGKYNAIYGTLALLPIFMVWIYTSWVIVLFGVEVVAA 291
>gi|255327084|ref|ZP_05368160.1| tRNA processing ribonuclease BN [Rothia mucilaginosa ATCC 25296]
gi|255296301|gb|EET75642.1| tRNA processing ribonuclease BN [Rothia mucilaginosa ATCC 25296]
Length = 463
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 8/271 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGA 69
I+ AI F G MA+ ++ +LS+FP ++ +L G G + ++ +
Sbjct: 52 ILRRAIYKFGANGGTDMAAALTYFTVLSIFPALLAIVSLLGVFGHGEESAAVILAFLKDN 111
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSW 128
P + + D I Q+ GL ++ + +A +S++G + +LN Y V E R
Sbjct: 112 APAQMYAILEDPIKQITGDHGAGLVLLTGILSALWSASGYTGSFGRALNTVYNVREGRPG 171
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI--IW-NGRIYAT 185
+I + ++ + + +V+M + + L V ++ P ++ LI IW NGR +
Sbjct: 172 WILKPLNVFVTTVLIILVVLMMLMMLLGVTVLDMVGQYVPETVDMELIKLIWLNGR-WIL 230
Query: 186 MLALFIGLI-FVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + IGLI ++ P + K + PG +G FT Y FS Y+ Y
Sbjct: 231 ILFMAIGLITLLYAATPNVRRFKQWKLSPGAALALFGMGLGGFGFTLYANNFSKYNATYG 290
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ ++ L+F++++ + GA L+A +++
Sbjct: 291 LIGGVIVMLLFIWIMNNMLLFGAHLDAEIML 321
>gi|119513701|ref|ZP_01632699.1| hypothetical protein N9414_21923 [Nodularia spumigena CCY9414]
gi|119461650|gb|EAW42689.1| hypothetical protein N9414_21923 [Nodularia spumigena CCY9414]
Length = 186
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%)
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
V+ + P+ + ++PG I +SW + + LF Y+ F Y+ +Y + +++ +++
Sbjct: 96 LVYRYGPSVWNSGTPMMPGAISASVSWAILSALFRTYVANFGNYNKVYGAVGAVIVLMLW 155
Query: 255 LYMLGVFFILGAELNAS 271
L+M ++G +LN S
Sbjct: 156 LWMSAAVMLIGDQLNVS 172
>gi|313207383|ref|YP_004046560.1| ribonuclease bn [Riemerella anatipestifer DSM 15868]
gi|312446699|gb|ADQ83054.1| ribonuclease BN [Riemerella anatipestifer DSM 15868]
gi|315023278|gb|EFT36288.1| Ribonuclease BN [Riemerella anatipestifer RA-YM]
gi|325335161|gb|ADZ11435.1| ribonuclease BN [Riemerella anatipestifer RA-GD]
Length = 301
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 30/262 (11%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA--WPEVIAKPITDEIL 83
A+ IS S LS+FPF++F ++ ++ + + I VF A P + +T+ I
Sbjct: 46 KQAASISWSFFLSIFPFLLFLLSILPYMPHYDKLQFYIFEVFMANILPTHMLHDVTEYIQ 105
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEAL--RISLNRAYRVVEMRSWYITRLISFGYVLL 141
+ K + ++ L A F++NG +L + N + +R + I+ L++ L
Sbjct: 106 NSIIPNMKSISKLTILFALVFATNGTFSLINGFNENTDSKRTFIREYTISILVT-----L 160
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI---------YATMLALF-- 190
A VTL+ +S I + ++ F P LI+ +I Y +L+LF
Sbjct: 161 AFVTLIFLSLF--GIYYSEVVLKLFTPKYNLNWLIVNLSKIIGFISFPLFYFILLSLFYW 218
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+G + V +L A PG + T + +V+ F Y F+ Y+ +Y + +I+
Sbjct: 219 VGCVKVKRWLSAV--------PGAVLTTLLFVLITYGFIFYATNFARYNVLYGSIGTIIL 270
Query: 251 CLVFLYMLGVFFILGAELNASM 272
++++ + + +LG ELN ++
Sbjct: 271 AMIWVNLNIILILLGNELNLAI 292
>gi|255019177|ref|ZP_05291303.1| transport protein [Listeria monocytogenes FSL F2-515]
Length = 76
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ +F+ F++ P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y +
Sbjct: 1 MVIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIG 60
Query: 247 SIM 249
I+
Sbjct: 61 VII 63
>gi|239994832|ref|ZP_04715356.1| ribonuclease BN [Alteromonas macleodii ATCC 27126]
Length = 294
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 44/284 (15%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------------HQFVPTV 62
I+ E++ A H++ LLS+ PFI+ + A FVPT
Sbjct: 25 IKRCREDNITISAGHLAYVTLLSLVPFIMVTFTIMSAFPAFASVRSKLEHFVFSNFVPTA 84
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
DVV K +TD + + A G+ ++ +A S+ + +LNR +R
Sbjct: 85 SDVVH--------KYMTDFVGNASQMSAIGILSLLVVALMLISN-----VDKTLNRIWRT 131
Query: 123 VEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-I 176
R T +I+ G +L+ S ++V+ S++ LA A+ ++ P LG LL +
Sbjct: 132 QSDRPIVYTFAIYWMVITLGPMLIGS-SVVVSSYL---TGLA-AFTEEYTPGLGTFLLSL 186
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ +G A MLA I +++ +P + L G I I++ + F Y+ F
Sbjct: 187 VPSG---AAMLAFTI----LYMVVPNRRVFARHALVGAIVATIAFEITKSGFALYVTNFP 239
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y +Y LA + +++Y+ + + GAE S+ + +K
Sbjct: 240 SYELIYGALAVVPILFLWVYLSWIIVLFGAEFTCSLGEAFENRK 283
>gi|300786173|ref|YP_003766464.1| ribonuclease [Amycolatopsis mediterranei U32]
gi|299795687|gb|ADJ46062.1| putative ribonuclease [Amycolatopsis mediterranei U32]
Length = 337
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ PG + + WV+ + F Y+ F +Y+ Y LA ++ LV+L++ + +LGAEL+
Sbjct: 234 LTPGGLLAVVLWVLASAGFALYVANFGSYNKTYGSLAGVIAFLVWLWISNLAILLGAELD 293
Query: 270 ASM 272
A +
Sbjct: 294 AEL 296
>gi|320108436|ref|YP_004184026.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
gi|319926957|gb|ADV84032.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
Length = 291
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ PG F I+W + V F Y+ F+ YS +Y L + + +V++++ + + GAEL
Sbjct: 219 EVFPGAAFATITWFLTTVGFGWYVTRFADYSQVYGSLGTGIVLMVWMFLTALSVLCGAEL 278
Query: 269 NASM 272
NA +
Sbjct: 279 NAEL 282
>gi|163815794|ref|ZP_02207165.1| hypothetical protein COPEUT_01974 [Coprococcus eutactus ATCC 27759]
gi|158448935|gb|EDP25930.1| hypothetical protein COPEUT_01974 [Coprococcus eutactus ATCC 27759]
Length = 365
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
LP K +I + +PG FT I W++ + + YI + MY LAS++ ++LYM
Sbjct: 216 LPVGKVRIKTAMPGAAFTTILWMLLSFGVSSYINLVGINTYMYGSLASVILLALWLYMCM 275
Query: 260 VFFILGAELNASM 272
++GAE+N M
Sbjct: 276 YVMLIGAEINKFM 288
>gi|326330668|ref|ZP_08196972.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
gi|325951509|gb|EGD43545.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
Length = 328
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 101 AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI-PLA 159
A + +S GV ++ ++N AY E R + +L+S G + +A++ VI++ VA+ P
Sbjct: 122 ALWSASGGVGSIMSAVNIAYDEEETRGFVKRKLLSLG-LTVAAIVFVIVTISLVAVAPAL 180
Query: 160 LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
L + P L W G + A +AL + L V A+ + +S+ G + +
Sbjct: 181 LDNLVDAGPVRWGLEAARWVGLVVAMSIALAV-LYKVAPDRDDAELRWVSV--GAVVATV 237
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
W+V +V F+ Y+ F +Y+ Y LA ++ L++L++ +LGAE+NA
Sbjct: 238 LWLVASVGFSLYVDNFGSYNKTYGALAGVVVLLLWLWLTMYVVLLGAEINAE 289
>gi|85714544|ref|ZP_01045531.1| hypothetical protein NB311A_20216 [Nitrobacter sp. Nb-311A]
gi|85698429|gb|EAQ36299.1| hypothetical protein NB311A_20216 [Nitrobacter sp. Nb-311A]
Length = 305
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
A+A+ ++ LL+VFP + +L G + +D + P + + + +I +V
Sbjct: 36 AVAAGVTFYGLLAVFPAVAALVSLYGLFADPVAIKRHLDQLSWLLPGGVVQVVGGQIQRV 95
Query: 86 LAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ L F I A + ++ GV+A+ ++N AY E RS+ LIS + L A
Sbjct: 96 SSAGTGTLGVSFIIGVAIAIWGANAGVKAVFDAINVAYGANEERSFVKLNLISLAFTLGA 155
Query: 143 SVTLVIMSFVFVAIP--LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+I V +P L A + F AL + GR LA+ I L ++ F
Sbjct: 156 IAFAIIALATVVVLPVFLQCAGLDALFDAL------LRYGRWPLIWLAIAIALSLLYRFG 209
Query: 201 PAAKSKIMSILPGVIFTWISW---------VVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
P S+ P + WI+W + + +F+ Y F +++ Y L + +
Sbjct: 210 PTD-----SLDPK--WRWITWGSALASLLWLAASAIFSWYAANFGSFNATYGSLGAAIGF 262
Query: 252 LVFLYMLGVFFILGAELNASM 272
+ ++++ + +LGAELN+ +
Sbjct: 263 MTWMWISAIVIMLGAELNSEI 283
>gi|114763244|ref|ZP_01442668.1| Ribonuclease BN [Pelagibaca bermudensis HTCC2601]
gi|114544042|gb|EAU47052.1| Ribonuclease BN [Roseovarius sp. HTCC2601]
Length = 313
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 13/264 (4%)
Query: 16 IEHFVEEDGWAM-ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
++ + ED ++ A+ ++ LL++FP I +AG V I + P+
Sbjct: 26 VKDGIGEDRLSLIAAGVAFFGLLAIFPAITALMAVAGLFLTPADVTDQIQQISAMLPDRA 85
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + D+ V GL + L Y +S GV L LN AY E R +
Sbjct: 86 AEIVIDQAKSVAGSDQGGLGLAALLGLGLALYSASAGVGNLVAGLNVAYGERESRGFVKL 145
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA--- 188
+L + L V LV+ + +P LA + LG ++ +G + +L
Sbjct: 146 KLTTMALTFLLIVGLVLAFAGVLILPGVLAVI-----PLGGTAELLVSGLRWVLLLGFTV 200
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + LI+ H ++ + PG + W+V +V F+ Y F +Y + LA +
Sbjct: 201 LAVALIY-HFGPDRRPARWRWVTPGAAIACLLWIVTSVGFSIYAENFGSYQETFGSLAGV 259
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ L +L++ +LG ++NA +
Sbjct: 260 VILLFWLWISAFVVLLGGKINAEL 283
>gi|149185280|ref|ZP_01863597.1| hypothetical protein ED21_19542 [Erythrobacter sp. SD-21]
gi|148831391|gb|EDL49825.1| hypothetical protein ED21_19542 [Erythrobacter sp. SD-21]
Length = 287
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 15/236 (6%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+++ +A+ ++ A L++ P + G + + G P A+ I
Sbjct: 37 KDNAGIVAAGVAYYAFLAIVPLLAAMVMGYGLFADPATAAAHAETLAGTLPRDAAELING 96
Query: 81 EILQV--LAVPAKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVEMRSWYITRLISFG 137
++ A AKG + AL A + G AL +LN AY + E R ++ L++ G
Sbjct: 97 QLKSAAEAATGAKGFGLLIALGVALMGARGGANALVKALNIAYDIEEERGFFRKNLLALG 156
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ A++ L+++ V A + L +L + +A + A + + H
Sbjct: 157 MTVGAAIGLIVV----VGAVTAAGVLEGITGQLASLFVTFG----FAALGAALVYRVAPH 208
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
PA K + LPG +F ++ VV LF Y+ F +Y+ Y L +++ L
Sbjct: 209 RDAPAFKFQ----LPGAVFFAVAIVVLTALFGFYVANFGSYNATYGSLGAVVVLLT 260
>gi|304320880|ref|YP_003854523.1| hypothetical protein PB2503_06577 [Parvularcula bermudensis
HTCC2503]
gi|303299782|gb|ADM09381.1| hypothetical protein PB2503_06577 [Parvularcula bermudensis
HTCC2503]
Length = 318
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
PG + I WV ++LF++Y+ + +S Y LA++ +++ Y+ F++G ELNA+
Sbjct: 228 PGALLGTILWVGTSLLFSYYVRHVNNFSATYGSLATVTVVMLWSYLSAFVFLIGGELNAA 287
Query: 272 M 272
+
Sbjct: 288 L 288
>gi|84500374|ref|ZP_00998623.1| ribonuclease BN [Oceanicola batsensis HTCC2597]
gi|84391327|gb|EAQ03659.1| ribonuclease BN [Oceanicola batsensis HTCC2597]
Length = 284
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 115/254 (45%), Gaps = 11/254 (4%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
E++ + +A+ ++ +L++FP + + G L + ++++ P + + I +
Sbjct: 19 EKNLFLIAAGVAFYGMLALFPAMAAIIAIWGLLSDPNVLVEQLELIRNILPVEVTRIIEN 78
Query: 81 EILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+I + L +S + A + + +GV AL + LN + S
Sbjct: 79 QINALSTASGDKLGWAGLVSMMVAIWSARSGVAALMLGLNAIHGRANRGSLRHYLTALVL 138
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFV 196
+ L V++V +S V +A P+ A++ LG + I+ R A + L GL V
Sbjct: 139 TLALLGVSVVTLSAVVIA-PIIFAFI-----PLGPVTAILVEAFRWVAAIFVLMAGLAVV 192
Query: 197 HLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ F P + + M + PG + W V + F+ Y+ F+ Y+ +Y + + + L++L
Sbjct: 193 YRFGPNNRGERMKWVTPGAVMAVALWAVASYGFSLYLANFANYNEVYGSIGAAVAMLMWL 252
Query: 256 YMLGVFFILGAELN 269
++ +LGA +N
Sbjct: 253 FISAFLVLLGAVVN 266
>gi|238854937|ref|ZP_04645267.1| YihY family protein [Lactobacillus jensenii 269-3]
gi|260664223|ref|ZP_05865076.1| methionine aminopeptidase Map [Lactobacillus jensenii SJ-7A-US]
gi|282931649|ref|ZP_06337142.1| putative ribonuclease [Lactobacillus jensenii 208-1]
gi|313472424|ref|ZP_07812916.1| putative YihY family protein [Lactobacillus jensenii 1153]
gi|238832727|gb|EEQ25034.1| YihY family protein [Lactobacillus jensenii 269-3]
gi|239529703|gb|EEQ68704.1| putative YihY family protein [Lactobacillus jensenii 1153]
gi|260562109|gb|EEX28078.1| methionine aminopeptidase Map [Lactobacillus jensenii SJ-7A-US]
gi|281304260|gb|EFA96369.1| putative ribonuclease [Lactobacillus jensenii 208-1]
Length = 286
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
L S+FP I+ N+ H V + + P +A I + VL + G +
Sbjct: 35 LFSMFPIIIIAGNIMPLF--HLKSGVVEEYLIYGLPAKVADFIMPIVKAVLQKQSTGYIS 92
Query: 96 ISALAAAYFSSNGVEALRISLNRAY--RVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
L A + S+ A+RIS+NR Y R E+R + +L+ G V+L + +++++
Sbjct: 93 FGVLIALWSFSSLTNAMRISMNRIYGVRQQELRFSFGRKLLERGVVVLITGSMIVL---L 149
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNG-------RIYATMLALFIGLIFVHLFLPAAKSK 206
+ + +AL + ++ ++ L I + G + ++ + + + + + LP + +
Sbjct: 150 MLLTIALTFGQEILNSVKAFLGISYLGIESIFTYKWLVLIVVMLVVIAYFNFALPNVQKR 209
Query: 207 IMSILPGVIFTWISWVVGAVLF----THYIVTFSTYS 239
+I PGV I W + LF +H+ ++F Y
Sbjct: 210 KRAIWPGVFVNLIGWAGLSYLFGLYLSHFKLSFENYG 246
>gi|297204551|ref|ZP_06921948.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197710614|gb|EDY54648.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 353
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 53 LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VE 110
+ H V+D + P ++ + Q+ G + I L A +S++G V
Sbjct: 95 IAGHSATQKVLDNIQKLAPGAARDVLSSAVKQMQGNAGIGSIMAIVGLVLAVWSASGYVA 154
Query: 111 ALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL 170
A S N Y V E R + + G V + + L ++S + V +LA +
Sbjct: 155 AFIRSANAVYDVPEGRPVWKVLPVRVG-VTVVLLILAVISALIVVFTGSLAQQLGTTLGI 213
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVL 227
G+ L +W+ + ++ L +I + L+ +K+ I PG + + W++ +
Sbjct: 214 GDTFLTVWSIAKWPVLVLLVTTMIAI-LYWATPNAKVRGFRWITPGSLLALVIWMIVSAG 272
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F Y+ F++Y+ Y A ++ LV+L++ + +LG E +A M
Sbjct: 273 FALYVANFASYNKTYGTFAGVIIFLVWLWITNLAILLGLEFDAEM 317
>gi|149010721|ref|ZP_01832092.1| ribonuclease BN, putative [Streptococcus pneumoniae SP19-BS75]
gi|147765202|gb|EDK72131.1| ribonuclease BN, putative [Streptococcus pneumoniae SP19-BS75]
Length = 286
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 23/249 (9%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG L + L ++
Sbjct: 94 LSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLI 153
Query: 150 SFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKS 205
F + + L Y K + AL L IYA + A+ L+ ++ FLP +
Sbjct: 154 LFGQMILALLAHYWTKDGIIYQALQGLA----GPLIYALLFAI---LVMLYYFLPNLSNR 206
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--MLGVFFI 263
KI LPG + + LF+ Y+ + + L S++ ++ + ++ I
Sbjct: 207 KISYTLPGSAVVLLVILGVLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVI 266
Query: 264 LGAELNASM 272
LGA +NASM
Sbjct: 267 LGAVINASM 275
>gi|269795024|ref|YP_003314479.1| hypothetical protein Sked_17180 [Sanguibacter keddieii DSM 10542]
gi|269097209|gb|ACZ21645.1| predicted membrane protein [Sanguibacter keddieii DSM 10542]
Length = 381
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLI 134
+P+ D++ + GL + LA A +S++G V A +LNR Y + E R + R
Sbjct: 104 EPLVDQVASQSS--GAGLALVIGLAGALWSASGYVGAFGRALNRVYEIEEGRPVWKLRPA 161
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + V + + +A LG++ L +W+ + +L + IG++
Sbjct: 162 NL-LITLVVAVGAALVVVALVLSGGVAQAVGDTIGLGSVALTVWSVAKWPVVLLVVIGMV 220
Query: 195 FV--HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ H + + + G + + W V + F Y+ T +Y + Y L +++ L
Sbjct: 221 ALLYHSTPNVRQPRFRWLSVGALVAILVWAVASAGFGVYVATLGSYGSTYGTLGTVIVFL 280
Query: 253 VFLYMLGVFFILGAELNASM 272
++L++ + + GAEL++ +
Sbjct: 281 LWLWITNLALLFGAELDSEL 300
>gi|59710707|ref|YP_203483.1| ribonuclease BN [Vibrio fischeri ES114]
gi|67460602|sp|Q5E8Q1|Y100_VIBF1 RecName: Full=UPF0761 membrane protein VF_0100
gi|59478808|gb|AAW84595.1| predicted inner membrane protein [Vibrio fischeri ES114]
Length = 310
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 37/247 (14%)
Query: 35 ALLSVFP-FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
++LS FP F G + F+ FVP D V + E I+ ++ AV + L
Sbjct: 52 SVLSQFPVFSGAGETVQAFV-IQNFVPAASDAVEASLKEFISN-----TGKMTAVGSGFL 105
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS--------WYITRLISFGYVLLASVT 145
F S + + ++ SLN +RV + R W I L LL +
Sbjct: 106 FVASVML--------ISSIDRSLNYIWRVKKKRRPMYSFSLYWMILTLGP----LLVGAS 153
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
L S+V + V F+ L L II + + F+GL +L +P K
Sbjct: 154 LAATSYVTSLKIMDDEIVSSFYRTLLGWLPIILS-------FSAFVGL---YLLVPNKKV 203
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++ L G + + V F YI F +Y +Y LA++ V++Y+ + ++G
Sbjct: 204 RVTHALIGAMSAGCLFEFSKVGFAQYITQFPSYQVIYGALAAVPILFVWVYLCWIIVLIG 263
Query: 266 AELNASM 272
AE+ AS+
Sbjct: 264 AEITASL 270
>gi|288559219|sp|B5FFD1|Y098_VIBFM RecName: Full=UPF0761 membrane protein VFMJ11_0098
Length = 310
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 37/247 (14%)
Query: 35 ALLSVFP-FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
++LS FP F G + F+ FVP D V + E I+ ++ AV + L
Sbjct: 52 SVLSQFPVFSGAGDTVQAFV-IQNFVPAASDAVEASLKEFISN-----TGKMTAVGSGFL 105
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS--------WYITRLISFGYVLLASVT 145
F S + + ++ SLN +RV + R W I L LL +
Sbjct: 106 FVASVML--------ISSIDRSLNYIWRVKKKRRPMYSFSLYWMILTLGP----LLVGAS 153
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
L S+V + V F+ L L II + + F+GL +L +P K
Sbjct: 154 LAATSYVTSLKIMDDEIVSSFYRTLLGWLPIILS-------FSAFVGL---YLLVPNKKV 203
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++ L G + + V F YI F +Y +Y LA++ V++Y+ + ++G
Sbjct: 204 RVTHALIGAMSAGCLFEFSKVGFAQYITQFPSYQVIYGALAAVPILFVWVYLCWIIVLIG 263
Query: 266 AELNASM 272
AE+ AS+
Sbjct: 264 AEITASL 270
>gi|197333895|ref|YP_002154869.1| tRNA-processing ribonuclease BN [Vibrio fischeri MJ11]
gi|197315385|gb|ACH64832.1| tRNA-processing ribonuclease BN [Vibrio fischeri MJ11]
Length = 316
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 37/247 (14%)
Query: 35 ALLSVFP-FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
++LS FP F G + F+ FVP D V + E I+ ++ AV + L
Sbjct: 58 SVLSQFPVFSGAGDTVQAFV-IQNFVPAASDAVEASLKEFISN-----TGKMTAVGSGFL 111
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS--------WYITRLISFGYVLLASVT 145
F S + + ++ SLN +RV + R W I L LL +
Sbjct: 112 FVASVML--------ISSIDRSLNYIWRVKKKRRPMYSFSLYWMILTLGP----LLVGAS 159
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
L S+V + V F+ L L II + + F+GL +L +P K
Sbjct: 160 LAATSYVTSLKIMDDEIVSSFYRTLLGWLPIILS-------FSAFVGL---YLLVPNKKV 209
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++ L G + + V F YI F +Y +Y LA++ V++Y+ + ++G
Sbjct: 210 RVTHALIGAMSAGCLFEFSKVGFAQYITQFPSYQVIYGALAAVPILFVWVYLCWIIVLIG 269
Query: 266 AELNASM 272
AE+ AS+
Sbjct: 270 AEITASL 276
>gi|239933081|ref|ZP_04690034.1| ribonuclease BN family membrane protein [Streptomyces ghanaensis
ATCC 14672]
gi|291441431|ref|ZP_06580821.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291344326|gb|EFE71282.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 359
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--N 172
S N Y + E R + + G ++ V VI S + V R+ ALG +
Sbjct: 164 SANAVYDMPEGRPIWKVLPVRVGMTVVLMVLAVISSLIVV---FTGGLARRAGDALGLGD 220
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFT 229
+ +W+ + +L + + ++ L+ A +KI I PG + + W++ + F
Sbjct: 221 TAVTVWSIAKW-PVLVVLVTIMIALLYWAAPNTKIRGFRWITPGSLLALVIWLIASAGFA 279
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ F++Y+ Y +A ++ LV+L++ + +LG E +A +
Sbjct: 280 FYVANFASYNKTYGTMAGVIVFLVWLWITNLAILLGLEFDAEI 322
>gi|148262717|ref|YP_001229423.1| putative ribonuclease BN [Geobacter uraniireducens Rf4]
gi|146396217|gb|ABQ24850.1| tRNA-processing RNAse BN [Geobacter uraniireducens Rf4]
Length = 449
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 134/291 (46%), Gaps = 26/291 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFP-FIVFGANLAGFLGAHQFV 59
+R Y I+ ++F++++ AS +S + +LS+ P F + A L G ++
Sbjct: 30 VRHYGVKYLQIMALVAKNFLDDNCMLRASALSFTTILSIVPLFALTFALLKGLGVQNKLE 89
Query: 60 PTVIDVVFGAWPEVIAKPIT-DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
P +++ V E++ K +T + ++ A GL T+ + + + N
Sbjct: 90 PLILEQVTAGSHELVDKIVTYINNTNMTSMGAIGLVTLIVTVITLLGN-----IEKAFNV 144
Query: 119 AYRVVEMRS------WYITRLISFGYVLLA--SVTLVIMSFVFVAIPLALAYVRKFFPAL 170
+ V E RS Y++ L+S ++LA S+T + S V + AY+
Sbjct: 145 VWGVRETRSPYRKFSDYLSVLVSGPLLMLAAISITTSLQSQAMVKWLVETAYI------- 197
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
G+L+L+ + Y ++++ + F+++F+P K + S + G + W + + H
Sbjct: 198 GDLMLLFFRLIPY---FSIWLAMFFLYIFIPNTKVRFKSAIIGGVLAGTIWQIAQWGYIH 254
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE-LNASMIIYYWRKK 280
+ V + Y+ +Y LA + +V++Y + + G E ++A I +R++
Sbjct: 255 FQVGVAKYNAIYGTLALLPIFMVWIYTSWLIVLFGVEVVSAHQNIRTFRRE 305
>gi|116249043|ref|YP_764884.1| ribonuclease domain-containing protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115253693|emb|CAK12086.1| putative transmembrane ribonuclease domain protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 359
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 101 AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL 160
A + + +G A+ ++N AY E R LI + L A + V+M + +P+ L
Sbjct: 159 ALWSTHSGTLAIFDAMNVAYEEEEKRGLIRLNLIGLCFTLCAMLLTVVMVALVGVMPVVL 218
Query: 161 AYV--RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFT 217
+Y+ +F + LL +L + + + V+ F P+ + +K+ + G + T
Sbjct: 219 SYLWLDQFKEHMALLLRWP------LLLLVVAVAVTSVYRFGPSREPAKLRWMTWGAVLT 272
Query: 218 WISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
++W ++ F++Y+ F+ Y+ Y L +++ L+++++ V I+G ELNA +
Sbjct: 273 TVAWTAMSLGFSYYLDHFANYNATYGTLGALIGFLIWIWLSVVILIVGGELNAEL 327
>gi|39997555|ref|NP_953506.1| ribonuclease BN [Geobacter sulfurreducens PCA]
gi|39984446|gb|AAR35833.1| ribonuclease BN, putative [Geobacter sulfurreducens PCA]
Length = 397
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 115/261 (44%), Gaps = 25/261 (9%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFG-ANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+F+++ AS ++ S LLS+ PF A L G + P ++D V E++ +
Sbjct: 3 NFMDDQCLLHASALTYSTLLSIVPFFALAFAVLKGLGVQNTLEPFILDQVAAGSHEIVDR 62
Query: 77 PIT-DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT---- 131
+T +V ++ A GL T+ + + + N + V E RS Y
Sbjct: 63 IVTYINNTKVGSLGAVGLVTLVVSTVTLLGN-----IEETFNSIWGVRETRSLYRRFSDY 117
Query: 132 -RLISFGYVLL---ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ FG +L+ SVT + S V + AY LG++L+ + Y +
Sbjct: 118 LSVVVFGPILIFAAISVTTTLESQKAVQWLIGTAY-------LGDVLVAAFRLVPY---V 167
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++++ L+F+++ +P K + S L G + W + H+ V + Y+ +Y LA
Sbjct: 168 SIWLALVFLYMLIPNTKVRFRSALVGGVIAGTLWQAAQWGYIHFQVGVAKYNAIYGTLAV 227
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
+ +++LY + G E+
Sbjct: 228 LPVFMIWLYASWSIVLFGVEV 248
>gi|305667292|ref|YP_003863579.1| Ribonuclease BN [Maribacter sp. HTCC2170]
gi|88709339|gb|EAR01572.1| Ribonuclease BN [Maribacter sp. HTCC2170]
Length = 326
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 121/284 (42%), Gaps = 29/284 (10%)
Query: 12 IYDAIEHF----VEEDGWAMASHISLSALLSVFPFIVFGANLAGFL------GAHQFVPT 61
+YD IE + V+ + AS I+ S +++FP ++F L FL G F
Sbjct: 35 LYDLIEMYILGIVQGALSSRASSIAFSLFMALFPLLIFLVTLVPFLIPYASVGNENFDAQ 94
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + P ++ + Q+ GL + + + + +NGV A+ +Y
Sbjct: 95 FLLFLESFLPTATSEYFGEIYQQIKNQQRGGLLSSAFFISIFLMANGVNAIFGGFENSYH 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIM-----------SFVFVAIPLALAYVRKFFPAL 170
+ R++ + + Y L+ + L ++ F V A + +
Sbjct: 155 IELTRNF----IRQYAYALMVGLILSVLLMFGAAAYVYFEFYIVDYLSEWAAKTRGYDLT 210
Query: 171 GNLLLIIWNGRI-YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLF 228
N ++ G++ + +L+ F I + K +K S+ G + T I +++ + LF
Sbjct: 211 ENDIVGAQIGKVLFFVLLSYFTTAILYYFGTAEGKQAKFFSV--GALMTTILFLLTSYLF 268
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ F+ Y+ +Y L ++ +VF+++ +LG ELNAS+
Sbjct: 269 GVYVEKFARYNELYGALGGLLILMVFIWLNSNILLLGFELNASL 312
>gi|258406232|ref|YP_003198974.1| ribonuclease BN [Desulfohalobium retbaense DSM 5692]
gi|257798459|gb|ACV69396.1| ribonuclease BN [Desulfohalobium retbaense DSM 5692]
Length = 425
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 182 IYATMLAL------FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+Y +L+L ++ LIF++ +P + + + L G + W L HY + F
Sbjct: 181 VYGGLLSLAPFFMAWLALIFIYTVMPNTRVRFLPALGGGLVAGFLWQATQKLLIHYQIGF 240
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
S Y+ +Y A + LV++Y+ + + GAE++
Sbjct: 241 SKYNAIYGSFAQVPLLLVWMYLSWIIVLFGAEIS 274
>gi|91794795|ref|YP_564446.1| ribonuclease BN [Shewanella denitrificans OS217]
gi|123356418|sp|Q12IK3|Y3448_SHEDO RecName: Full=UPF0761 membrane protein Sden_3448
gi|91716797|gb|ABE56723.1| tRNA-processing RNAse BN [Shewanella denitrificans OS217]
Length = 313
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ +LN +R E RS ++ +++ G VL+ S +LV S+V + + +
Sbjct: 118 ISAIDKALNNIWRTTEKRSLVVSFSMYWMVLTLGPVLMGS-SLVATSYVVSLELFSQSEL 176
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
P L L ML ++ +++ +P K + L G + + +
Sbjct: 177 SGLLPWLVERL----------PMLFSVASILLLYMVVPTQKVRFFHALLGAVVAALLFEA 226
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
G F +Y+ F +Y +Y LA+I V++Y+ + ++GAE+ A++ Y
Sbjct: 227 GKRAFAYYVTQFPSYEAIYGALATIPILFVWVYLSWMIVLVGAEITAALPEY 278
>gi|322436851|ref|YP_004219063.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
gi|321164578|gb|ADW70283.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
Length = 386
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 188 ALFIGLIF--VHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
AL L+F ++ F P K+K PG WV+ +V+ Y+ F++YS Y
Sbjct: 268 ALLCVLLFAVIYYFAPDVKNKHWRWFTPGAAVGIGGWVLASVILRVYLHYFNSYSVTYGS 327
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM 272
L +++ L + YM G+ + GAE+N+ +
Sbjct: 328 LGAVIILLTWFYMTGLMLLTGAEMNSEI 355
>gi|311742752|ref|ZP_07716561.1| YihY family protein [Aeromicrobium marinum DSM 15272]
gi|311314380|gb|EFQ84288.1| YihY family protein [Aeromicrobium marinum DSM 15272]
Length = 311
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 13/251 (5%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ A LS+FP ++ G G + + + + V A P A IT + ++ L
Sbjct: 23 LAAGVAFYAFLSLFPAMIAGILTYGLVVSPETLTRHTQAVGDALPADAASLITGQ-MESL 81
Query: 87 AVPAKGLFTIS-ALA---AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A + G ALA A Y +S GV L ++N + E RS+ +L+S G
Sbjct: 82 ADSSGGSLGFGLALAVVLALYSASGGVGNLVTAVNEMFGFPETRSFIKRKLLSLGLTA-G 140
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
++ +++ VA+ A+ P L + + GR + AL +G+ + P
Sbjct: 141 ALLFFVVTITLVAVAPAVLDALIDVP---GLRIALEAGRWAMLLGALVVGVGVLFRLAPD 197
Query: 203 AKSKIMSIL--PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ + L GV+ W+V ++ F+ Y+ F +Y Y LA ++ L++L+ G+
Sbjct: 198 RTDEQATPLVNRGVVVAAALWLVVSLGFSLYVDNFGSYGETYGALAGVVILLLWLWA-GL 256
Query: 261 F-FILGAELNA 270
F +LGA + +
Sbjct: 257 FAMLLGASIES 267
>gi|269126031|ref|YP_003299401.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
gi|268310989|gb|ACY97363.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
Length = 300
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 24/222 (10%)
Query: 55 AHQFV--PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
AH+ + P V DVV P+ DE+++ V L ++S L + + S
Sbjct: 80 AHKILAGPAVDDVV---------TPLIDEVIRGGGVD---LISVSFLLSLWAGSRATNVY 127
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
++ AY + +R TRL +F L+ V++ + VA P A VR+ P +G
Sbjct: 128 VDTITIAYGLSGLRGVIRTRLRAFTLYLIGLAVAVVVIPLLVAGP---ALVRQALP-VGE 183
Query: 173 --LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+ L+ W + T+ +F+ ++ H+ +P S + ++ PG + W++G+V
Sbjct: 184 AFVRLLYWP--VVVTLSIMFLATLY-HMSVPVRTSWLRTV-PGAVLALAIWILGSVALRV 239
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ + +++ L + + + +LY+ + ++GA LNA +
Sbjct: 240 YLAGSLSGVSVHGSLGAPIAVMAWLYVTALAVLIGAMLNAEI 281
>gi|320106965|ref|YP_004182555.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
gi|319925486|gb|ADV82561.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
Length = 331
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 36/234 (15%)
Query: 15 AIEHFV-EEDGWAMASHISLSALLSVFPFIVF----------GANLAGFLGA--HQFVPT 61
A+ H++ + D A ++ + +LS+FPFIV A + G G H F+PT
Sbjct: 62 ALLHYLGQTDVHTYAFSVAANVILSLFPFIVLLLTLSRRVFHSAAMEGVAGEMMHYFLPT 121
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAY 120
D V +Q+LA P KG+ I ++ FSS GV L ++LN +
Sbjct: 122 GQDFVM-------------RNMQLLAHPQKGV-QIFSVFMLLFSSTGVFLPLEVALNNVW 167
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA-LAYVRKFFPALGNLLLIIWN 179
V + R++ +++S G + A L + S F A LAY+ FF N + +
Sbjct: 168 HVKKNRNYLQNQIVSLG-LAFAVGALAMASIAFTAGQQTLLAYL--FFGHTQNATYRVVS 224
Query: 180 GRIYATMLALFIGLI---FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+ + +LA+ G++ ++ LP K M++LP I + W L+ H
Sbjct: 225 -QNFMHLLAVLAGILLFFLIYWILPNRKVPAMAVLPTAIVIGLLWEACKELYIH 277
>gi|152998866|ref|YP_001364547.1| ribonuclease BN [Shewanella baltica OS185]
gi|166199584|sp|A6WI45|Y314_SHEB8 RecName: Full=UPF0761 membrane protein Shew185_0314
gi|151363484|gb|ABS06484.1| putative ribonuclease BN [Shewanella baltica OS185]
Length = 323
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 16/172 (9%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ SLN +R E RS + +++ G VL+ + +LV S+V +
Sbjct: 118 ISAIDKSLNNIWRTKEKRSVVVAFSMYWMVLTLGPVLVGA-SLVASSYVI--------SL 168
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
+ F + +L I+ R+ ML + +++ +P K K + L G I + + +
Sbjct: 169 KVFEAEALSGMLPIFIARL--PMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFEL 226
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
G F Y+ F +Y +Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 227 GKKGFALYVTQFPSYEAIYGALATIPIVFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|309812239|ref|ZP_07705997.1| YihY family protein [Dermacoccus sp. Ellin185]
gi|308433926|gb|EFP57800.1| YihY family protein [Dermacoccus sp. Ellin185]
Length = 522
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 114/276 (41%), Gaps = 28/276 (10%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A F ++ +A+ ++ ++ ++FP I+ + G G Q D V A E++
Sbjct: 24 AAAKFSQDQCTDLAASLTYYSVQAMFPAIIAAVSTIGLFGNGQ---KTTDSVIEAIAEIV 80
Query: 75 AKPITD------EILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS 127
K D + L GL I + + +S++G V A NR Y V E R
Sbjct: 81 GKNKDDIPEGFTTFINNLQGGGAGLAFILGILVSLWSASGYVNAFSRMSNRIYDVAEGRP 140
Query: 128 WYITRL-------ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN- 179
+ RL ++F +LA+ +LV+ + I ++ LG +W+
Sbjct: 141 VFKLRLWLYFVTIVAFVLAILAAFSLVVSGGIAEQIFDSVG--------LGTQAATVWDW 192
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSIL--PGVIFTWISWVVGAVLFTHYIVTFST 237
++ ++ + + + P K + PG + ++ W +G + F Y+
Sbjct: 193 AKVPFVVVVVIFIISLLFWGTPNVKRPFKQAMFNPGAVLAFVIWAIGTIAFAWYVSNMGN 252
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y Y +A+ + L++L++ + + GAE ++ +
Sbjct: 253 YGKTYGPMATPIILLLWLWITNLAMLFGAEFDSETL 288
>gi|307709513|ref|ZP_07645969.1| ribonuclease BN-like family protein [Streptococcus mitis SK564]
gi|307619732|gb|EFN98852.1| ribonuclease BN-like family protein [Streptococcus mitis SK564]
Length = 286
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 36 LLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
L+S+FP ++ N+ + + +F+ + DV+ P + + + +VL P+ GL
Sbjct: 38 LISIFPLLLVVVNILPYFQIPVGEFLGFMKDVL----PPSLYEGVEKIAREVLTQPSTGL 93
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYITRLISFGYVLLASVTLVIM 149
+ S L+A + S + L+ + N+AY V + R ++ L+SFG LL + L +
Sbjct: 94 LSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMVSLLVSFGLQLLFAFALFLS 153
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA---------LFIGLIFVHLFL 200
F + + L Y K +G IY + LF L+ ++ FL
Sbjct: 154 LFGQMILDLLAHYWTK-------------DGIIYQALQGLAGPLTYALLFAILVMLYYFL 200
Query: 201 PA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY--M 257
P + KI LPG F + + LF+ Y+ + + L S++ ++ + +
Sbjct: 201 PNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFIL 260
Query: 258 LGVFFILGAELNAS 271
+ ILGA +NAS
Sbjct: 261 IAKIVILGAVINAS 274
>gi|119469197|ref|ZP_01612181.1| putative ribonuclease protein [Alteromonadales bacterium TW-7]
gi|119447449|gb|EAW28717.1| putative ribonuclease protein [Alteromonadales bacterium TW-7]
Length = 317
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 105 SSNGVEALRISLNRAYRVVEMRSWYITRLISF----GYVLLASVTLVIMSFVFVAIPLAL 160
SS G +AL + N +Y E RS+ + + F G +L+A L+I+ +P+ L
Sbjct: 121 SSKGSQALITACNISYHEYEKRSFLRAQFVRFMFSVGAILVAIFALLIIGI----LPIVL 176
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWI 219
V +LL+ + + I A L L+ ++ + P K+ K I G +
Sbjct: 177 NLVG--LKDSIDLLIKVVSWPILA--LKFNFALVLLYRYAPHRKAAKWRWITLGSAIATV 232
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
W++ ++ F+ Y+ FS+Y+ Y L ++ L++LY+ +GA +NA
Sbjct: 233 FWIIASIGFSFYVSRFSSYNETYGSLGGVVIMLMWLYISAYIVTMGAVINAE 284
>gi|294675580|ref|YP_003576195.1| ribonuclease BN [Rhodobacter capsulatus SB 1003]
gi|294474400|gb|ADE83788.1| ribonuclease BN [Rhodobacter capsulatus SB 1003]
Length = 269
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT----ISALAAAYFSSNGVE 110
A F+P PE A I D + +L +G+ +S L A + + GV+
Sbjct: 58 AQNFIP----------PEAYA--ILDAQVSMLLAGPRGVIGWGTLVSVLFALFSARAGVD 105
Query: 111 ALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-- 168
AL LN + E R+ L FGY++ +V LV + + +A +AL + F P
Sbjct: 106 ALVQGLNVIHGS-EPRNTIFGFL--FGYLM--TVALVGVMLMAMATIVALPILANFLPFH 160
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFV----HLFLPAAKSKIMSILPGVIFTWISWVVG 224
A+ +LL +G + M+AL + ++ V + P + I S+ G + + W
Sbjct: 161 AVTTVLL---SGLPWIAMVALMLTVLGVLYRFAPYRPRRRDPIFSL--GSVVATLVWGGA 215
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL-GAELNASM 272
++ T Y+ F TY+ +Y L +++ L++LY LG F +L GA LNA +
Sbjct: 216 SIGLTTYLANFGTYNKVYGSLGAVIALLMWLY-LGAFSVLFGAALNAEL 263
>gi|330504179|ref|YP_004381048.1| tRNA-processing RNAse BN [Pseudomonas mendocina NK-01]
gi|328918465|gb|AEB59296.1| tRNA-processing RNAse BN [Pseudomonas mendocina NK-01]
Length = 405
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 116/293 (39%), Gaps = 61/293 (20%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFP--------------FIVFGANLAGFLGAHQFVPTV 62
+ FVE G A+ ++ + L +V P F G + GF+ H FVP+
Sbjct: 17 QRFVENRGAGNAAALTYTTLFAVVPMMTVTFAMLSAIPAFQGVGEEIQGFI-FHNFVPST 75
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAY 120
+ V E L+ A+ L F + LA F + + + N +
Sbjct: 76 GETV-------------QEYLREFTTQARQLTWFGVGLLAVTAFLM--LVTIEKTFNVIW 120
Query: 121 RVVEMRS--------WYITRLISFGYVLLAS---VTLVIMSFVFVAIPLALAYVRKFFPA 169
RV + R W I +S G +LL + V+ I S ++ P A+ +
Sbjct: 121 RVRQPRRGMSSFLLYWAI---LSLGPLLLGAGFAVSTYIASLSLISGPDAVVGAKTLLS- 176
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+A +L+ ++ +P + + L G +F+ I + + LF
Sbjct: 177 -------------FAPLLSSIAAFTLLYAAVPNTRVPLRHALLGGLFSAILFEIAKALFG 223
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM-IIYYWRKKP 281
Y+ F Y +Y A++ LV++Y+ + +LGAEL + YWR++P
Sbjct: 224 LYVRLFPGYHLIYGAFATVPLFLVWIYLSWLIVLLGAELVYGLSQPRYWRREP 276
>gi|329940661|ref|ZP_08289942.1| ribonuclease [Streptomyces griseoaurantiacus M045]
gi|329300722|gb|EGG44619.1| ribonuclease [Streptomyces griseoaurantiacus M045]
Length = 393
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 14/264 (5%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVIDVVFGAWPEV 73
+ F ++ A+ ++ +LS+FP ++ L FLG ++D V P
Sbjct: 94 LREFKNDELTDRAAALTYYGVLSLFPALLV---LVSFLGMTGKSTTDKLLDQVDSLAPGS 150
Query: 74 IAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS-WYI 130
+ +T + Q+ G + + + A +S++G + A + N Y V E R W +
Sbjct: 151 ASDIVTKAVRQLQDNGGTGSIMAVVGIVLALWSASGYIAAFIRTANAVYDVPEGRPVWKV 210
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L V+L + L I+S V +A LG+ L +W+ + +L +
Sbjct: 211 LPLRLAVTVVL--MVLAIISSCIVVFTGGIAKRAGDALGLGDTALTVWSIAKWP-VLVIL 267
Query: 191 IGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ ++ L+ +K+ I PG + + W+V + F Y+ F +Y+ Y +A
Sbjct: 268 VTIMIAILYWSTPNAKVRGFRWITPGSLLALLIWLVASAGFAFYVANFGSYNKTYGTMAG 327
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
++ LV+L++ + +LG E +A
Sbjct: 328 VIVFLVWLWISNLAILLGLEFDAE 351
>gi|192292202|ref|YP_001992807.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
gi|192285951|gb|ACF02332.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
Length = 310
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 21/279 (7%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ CIV + F + AS ++ LL P + +L G V ++
Sbjct: 23 RWGCIVLRVG----RQFFRDGLSTAASSVAFYILLGSVPGLAAVISLYGLFADPHDVGSL 78
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA-----LAAAYFSSN-GVEALRISL 116
G P IAK + +I ++ + G S +A +S+N G++ +L
Sbjct: 79 SRATAGIVPTDIAKLLGQQIDRLAEQDSSGSHGPSLDYLVWIALLLWSANRGIKGFSDAL 138
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N Y VE R+W L+ G LL +V + +A L L V P+ + +
Sbjct: 139 NIIYNRVEERTW----LLRTGVTLLITVGAIGFLVFTLAAVLVLPIVLAALPSENTIATL 194
Query: 177 I----WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
W + T LA+ +I + +S SIL G + W+V ++ F Y
Sbjct: 195 TGWLRWPIMLVLTTLAI---MILLRCGPSRKESHWPSILRGSLIGAALWIVVSLGFAWYA 251
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ +S +Y L S++ + +L++ + ++GAE +A+
Sbjct: 252 QNIANFSALYGSLGSVIAFMTWLWLSALAVLVGAEFDAA 290
>gi|298208253|ref|YP_003716432.1| Ribonuclease BN [Croceibacter atlanticus HTCC2559]
gi|83848174|gb|EAP86044.1| Ribonuclease BN [Croceibacter atlanticus HTCC2559]
Length = 307
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 120/261 (45%), Gaps = 32/261 (12%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID---VVFGAWPEVIAKPITDEILQ 84
AS I+ S ++VFPF++F NL F+ T ID + F + + + P T E
Sbjct: 55 ASAIAFSFFMAVFPFLLFMLNLIPFI-------TFIDDFQLEFLTFMDALLPPTTTEFFN 107
Query: 85 -----VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + GL + + + + + +NGV A+ ++ RS +++ G
Sbjct: 108 GIFADIASNQRGGLLSFTFVLSIFLMANGVNAVFTGFEYSFHTSINRSIIRQYMVAVG-- 165
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA---LFIGLIFV 196
S+ L ++ V + ++Y+ ++G I+N ++ +A +F+ +++V
Sbjct: 166 --VSIILALLLLTTVIATVYISYIIDGLTSMG-----IFNDDVFWLQIARYGVFVIIVYV 218
Query: 197 ---HLFLPAAKSKIMSIL--PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L+ + + G +FT + ++ LF YI FS Y+ +Y + +++
Sbjct: 219 ITALLYYTGTREGKHTSFWSAGALFTTLLIMLTTYLFGIYIENFSNYNELYGSIGTLLIL 278
Query: 252 LVFLYMLGVFFILGAELNASM 272
+V++++ +LG ELNAS+
Sbjct: 279 MVYIWINSNIILLGFELNASI 299
>gi|126172568|ref|YP_001048717.1| ribonuclease BN [Shewanella baltica OS155]
gi|160873444|ref|YP_001552760.1| ribonuclease BN [Shewanella baltica OS195]
gi|166199583|sp|A3CZD5|Y315_SHEB5 RecName: Full=UPF0761 membrane protein Sbal_0315
gi|189039572|sp|A9KXA4|Y319_SHEB9 RecName: Full=UPF0761 membrane protein Sbal195_0319
gi|125995773|gb|ABN59848.1| tRNA-processing RNAse BN [Shewanella baltica OS155]
gi|160858966|gb|ABX47500.1| ribonuclease BN [Shewanella baltica OS195]
gi|315265673|gb|ADT92526.1| ribonuclease BN [Shewanella baltica OS678]
Length = 323
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ SLN +R E RS + +++ G VL+ + +LV S+V I L
Sbjct: 118 ISAIDKSLNNIWRTKEKRSVVVAFSMYWMVLTLGPVLVGA-SLVASSYV---ISL----- 168
Query: 164 RKFFPALG-NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
K F A + +L I+ R+ ML + +++ +P K K + L G I + +
Sbjct: 169 -KVFEAEALSGMLPIFIARL--PMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFE 225
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+G F Y+ F +Y +Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 226 LGKKGFALYVTQFPSYEAIYGALATIPIVFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|310816214|ref|YP_003964178.1| ribonuclease BN [Ketogulonicigenium vulgare Y25]
gi|308754949|gb|ADO42878.1| ribonuclease BN [Ketogulonicigenium vulgare Y25]
Length = 288
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 107/224 (47%), Gaps = 23/224 (10%)
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAK---GLFTISALAAAYFSSN-GVE 110
AH F+P GA+ E++A +T L P G TI + A +S+ GV
Sbjct: 73 AHDFLPP------GAY-ELVADQVTR-----LVEPGPRTLGWATIVSTGVALWSARAGVG 120
Query: 111 ALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL 170
AL LN A + R+ ++ +++ +L ++ +V ++ V + + + + + F
Sbjct: 121 ALAEGLN-AVQGTGSRNGFVHIMVA----MLMTIAMVGITMVGLLVTILVPIIVLIFQPP 175
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLF 228
GN+ ++ R + ++ I L ++ + P+ + + I PG + + W+ + LF
Sbjct: 176 GNVATLLEFMRWVVMLTSVLIALGLLYRYGPSRRRGLRFSWITPGSVIVLVLWLGVSYLF 235
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ Y+ F Y+ +Y + +++ +++LY+ +LG LNA +
Sbjct: 236 SLYVGNFGNYNEVYGSIGAVIALMMWLYISAFLVLLGGALNAEI 279
>gi|217971528|ref|YP_002356279.1| ribonuclease BN [Shewanella baltica OS223]
gi|254789781|sp|B8E4B5|Y320_SHEB2 RecName: Full=UPF0761 membrane protein Sbal223_0320
gi|217496663|gb|ACK44856.1| ribonuclease BN [Shewanella baltica OS223]
Length = 323
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ SLN +R E RS + +++ G VL+ + +LV S+V I L
Sbjct: 118 ISAIDKSLNNIWRTKEKRSVVVAFSMYWMVLTLGPVLVGA-SLVASSYV---ISL----- 168
Query: 164 RKFFPALG-NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
K F A + +L I+ R+ ML + +++ +P K K + L G I + +
Sbjct: 169 -KVFEAEALSGMLPIFIARL--PMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFE 225
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+G F Y+ F +Y +Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 226 LGKKGFALYVTQFPSYEAIYGALATIPIVFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|24375881|ref|NP_719924.1| ribonuclease BN [Shewanella oneidensis MR-1]
gi|32699638|sp|Q8E985|Y4401_SHEON RecName: Full=UPF0761 membrane protein SO_4401
gi|24350851|gb|AAN57368.1|AE015873_11 ribonuclease BN [Shewanella oneidensis MR-1]
Length = 295
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 36/182 (19%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ SLN +R E RS + +I+ G VL+ + +LV S+V
Sbjct: 118 ISAIDKSLNNIWRTKEKRSVVVAFSMYWMVITLGPVLVGA-SLVATSYV----------- 165
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFI----------GLIFVHLFLPAAKSKIMSILPG 213
+ L ++ G + M+ LFI + +++ +P K K L G
Sbjct: 166 ---------VSLKLFEGDALSGMMPLFIERLPLLFSVAAFLLLYMVVPNQKVKFWHALLG 216
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + +G F Y+ F +Y +Y LA+I V++Y+ + +LGAE+ A+M
Sbjct: 217 AVVAALLFELGKKGFAFYVTKFPSYEAIYGALATIPILFVWVYLSWMIVLLGAEITAAMP 276
Query: 274 IY 275
Y
Sbjct: 277 EY 278
>gi|288920775|ref|ZP_06415075.1| ribonuclease BN [Frankia sp. EUN1f]
gi|288347851|gb|EFC82128.1| ribonuclease BN [Frankia sp. EUN1f]
Length = 367
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLI 176
AY ++RS +RL++ + T VI+ V P L+ + PA+ LL
Sbjct: 197 AYGQRDLRSAVRSRLLALWLFMAQVATGVILLPALVLGPSLLSDLLDAGRHPAVDELLRD 256
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
++ + LA+ L HL LP + LPG W+VG+ L Y+
Sbjct: 257 VFWPVVGVVALAMLTTLY--HLALPQ-RRPWRRALPGAALALFLWLVGSYLLRMYLELVF 313
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ +Y LA+ + L+F Y+ + +LGAELNA++
Sbjct: 314 SNELVYGSLAAPVAALLFFYITALAVLLGAELNAAL 349
>gi|325287381|ref|YP_004263171.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
gi|324322835|gb|ADY30300.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
Length = 301
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 62 VIDVVFGAWP-EVIAKPITDEILQVLAVPA---------------KGLF-TISALAAAYF 104
+I+VV W +++ +T+EI L A K L TI + F
Sbjct: 53 IINVVGSIWGIDIVQGNLTNEISSALGSDAAKAIENIIGETQNSNKNLTSTIIGIGTLLF 112
Query: 105 SSNGV-EALRISLNRAYRVV---EMRSWYI--TRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ GV L+ISLN +++ + + W I R ISF ++L+ L++ V AI
Sbjct: 113 GATGVFYQLKISLNEIWKIKPNPKAKIWKIVTDRAISFAFILVIGFLLLVSFIVTTAISA 172
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
Y+R+ P + L I + + ++++ L+F +LP AK K ++ G I T
Sbjct: 173 LNNYIREVLPEVLLYLAYILDFSLSVGIISILFALMFK--YLPDAKIKWKTVWIGAILTA 230
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ +V+G +L Y ST Y SI+ L+++ + GAE
Sbjct: 231 LLFVIGKLLLGIYFGQADPGST-YGAAGSIVLILLWVSYSSLILFFGAE 278
>gi|289773646|ref|ZP_06533024.1| ribonuclease BN family membrane protein [Streptomyces lividans
TK24]
gi|289703845|gb|EFD71274.1| ribonuclease BN family membrane protein [Streptomyces lividans
TK24]
Length = 394
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
F +++ A+ ++ +L++FP ++ +L G G V+D V P
Sbjct: 100 EFKDDELTDRAAALTYYGILALFPALLVLVSLLGIAG-DSATQEVLDNVKKLAPGSARDV 158
Query: 78 ITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS-WYITRLI 134
+T+ + Q+ A G + + L A +S++G V A S N Y V E R W + L
Sbjct: 159 LTNAVEQLQAKAGLGSVLAVVGLVGAVWSASGYVAAFIRSANAVYDVPEGRPVWKV--LP 216
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + + L ++S + V +LA +G+ L +W+ + +L L + +
Sbjct: 217 LRVALTVVLLVLAVVSALIVVFTGSLARQAGTALGVGDTALTVWSIAKW-PVLVLLVTFM 275
Query: 195 FVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L+ A +++ I PG + + W++ + F Y+ F +Y+ Y LA ++
Sbjct: 276 IAILYWAAPNARVKGFKWISPGSLVALLIWLLASAGFAFYVANFGSYNKTYGTLAGVIIF 335
Query: 252 LVFLYMLGVFFILGAELNASM 272
LV+L++ + +LG E +A +
Sbjct: 336 LVWLWVTNLAILLGLEFDAEL 356
>gi|292493155|ref|YP_003528594.1| ribonuclease BN [Nitrosococcus halophilus Nc4]
gi|291581750|gb|ADE16207.1| ribonuclease BN [Nitrosococcus halophilus Nc4]
Length = 456
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 119/277 (42%), Gaps = 16/277 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVF 67
+ Y F E + A+ + + LLS+ P + ++ G H Q P + +
Sbjct: 35 LKLTYVVSREFFEGELTLRATSLVYTTLLSLAPLLAVSFSVLKAFGVHNQMEPVLHHFLL 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVEMR 126
P A+ IT I+Q + G L +++ + ++ + + N +R+ R
Sbjct: 95 PLGPR--AEEITTRIIQYVENLKVGALGSIGLGLLFYTVVSLIQKIESAFNHVWRIKRER 152
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWNGRIYA 184
++ R + VLL LV + A + ++++ F LG L+ + Y
Sbjct: 153 P-FLRRFSDYLSVLLIGPVLVFSAVGATASVMQTSFIQTLLEFEVLGKALVAMSKLLPY- 210
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + G F++ FLP K + + L G + W +LF +I T + Y +Y+
Sbjct: 211 --LLVIGGFTFIYAFLPNTKVRFGNALVGGAVAGVLWETIGLLFAFFITTSTKYDAIYSS 268
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
LA ++ +++LY+ + ++GA+ + Y+R+ P
Sbjct: 269 LAILILFMIWLYISWLILLVGAQ------VAYYRQNP 299
>gi|111224904|ref|YP_715698.1| hypothetical protein FRAAL5539 [Frankia alni ACN14a]
gi|111152436|emb|CAJ64172.1| Putative membrane protein (partial) [Frankia alni ACN14a]
Length = 388
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 90 AKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS-WYITRLISFGYVLLASVTLV 147
+ G+ I LA A +S++G + A + N Y + E R W I L LL ++TLV
Sbjct: 168 SGGVVAIIGLAGALWSASGYIAAFIRAANAVYDMPEGRPVWKIAPL-----RLLITITLV 222
Query: 148 IM---SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI-FVHLFLPAA 203
++ S V V ALA LG+ + W+ + ++ + +I ++ P
Sbjct: 223 VLLAVSSVIVVFSGALAEQAGTAIGLGHEAITAWSFAKWPVLVLIVTAVIALLYWSTPNV 282
Query: 204 KSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ + PG + + W+V + F Y+ TF +Y+ Y LA ++ LV+L++ +
Sbjct: 283 RPHGFRWLTPGSVLAVVIWLVASGAFAFYVATFGSYNKTYGTLAGVIVFLVWLWLSNLAI 342
Query: 263 ILGAELN 269
+LG E +
Sbjct: 343 LLGLEFD 349
>gi|332142905|ref|YP_004428643.1| hypothetical protein MADE_1017605 [Alteromonas macleodii str. 'Deep
ecotype']
gi|332143050|ref|YP_004428788.1| hypothetical protein MADE_1018330 [Alteromonas macleodii str. 'Deep
ecotype']
gi|288559237|sp|B4RYA6|Y3526_ALTMD RecName: Full=UPF0761 membrane protein MADE_03526
gi|327552927|gb|AEA99645.1| hypothetical protein MADE_1017605 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327553072|gb|AEA99790.1| hypothetical protein MADE_1018330 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 294
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 123/284 (43%), Gaps = 44/284 (15%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------------HQFVPTV 62
I+ E++ A H++ LLS+ PFI+ + A FVPT
Sbjct: 25 IKRCKEDNITISAGHLAYVTLLSLVPFIMVTFTIMSAFPAFASVRSKLEHFVFSNFVPTA 84
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
DVV K +TD + + A G+ ++ +A S+ + +LNR +R
Sbjct: 85 SDVVH--------KYMTDFVGNASQMSAIGILSLLVVALMLISN-----VDKTLNRIWRT 131
Query: 123 VEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-I 176
R T +I+ G +L+ S ++V+ S++ LA A+ ++ P LG LL +
Sbjct: 132 QSDRPIVYTFAIYWMVITLGPMLIGS-SVVVSSYL---TGLA-AFTEEYTPGLGTFLLSL 186
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ +G A +LA I +++ +P + G I I++ + F Y+ F
Sbjct: 187 VPSG---AALLAFAI----LYMVVPNRRVYARHAFVGAIVATIAFEITKSGFALYVTNFP 239
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y +Y LA + +++Y+ + + GAE S+ + KK
Sbjct: 240 SYELIYGALAVVPILFLWVYLSWIIVLFGAEFTCSLGEAFENKK 283
>gi|256789758|ref|ZP_05528189.1| hypothetical protein SlivT_35203 [Streptomyces lividans TK24]
Length = 402
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
F +++ A+ ++ +L++FP ++ +L G G V+D V P
Sbjct: 108 EFKDDELTDRAAALTYYGILALFPALLVLVSLLGIAG-DSATQEVLDNVKKLAPGSARDV 166
Query: 78 ITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS-WYITRLI 134
+T+ + Q+ A G + + L A +S++G V A S N Y V E R W + L
Sbjct: 167 LTNAVEQLQAKAGLGSVLAVVGLVGAVWSASGYVAAFIRSANAVYDVPEGRPVWKV--LP 224
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + + L ++S + V +LA +G+ L +W+ + +L L + +
Sbjct: 225 LRVALTVVLLVLAVVSALIVVFTGSLARQAGTALGVGDTALTVWSIAKW-PVLVLLVTFM 283
Query: 195 FVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L+ A +++ I PG + + W++ + F Y+ F +Y+ Y LA ++
Sbjct: 284 IAILYWAAPNARVKGFKWISPGSLVALLIWLLASAGFAFYVANFGSYNKTYGTLAGVIIF 343
Query: 252 LVFLYMLGVFFILGAELNASM 272
LV+L++ + +LG E +A +
Sbjct: 344 LVWLWVTNLAILLGLEFDAEL 364
>gi|300114145|ref|YP_003760720.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299540082|gb|ADJ28399.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 455
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 109 VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-- 166
++ + + N +R+ R + R + VLL LV + A + ++++
Sbjct: 135 IQKVEGAFNHVWRIKAERP-FARRFSDYLSVLLIGPVLVFSAVGATASVMQTSFIQTLLD 193
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
F LG L+++ Y ++A G F++LFLP K ++ S L G I W +
Sbjct: 194 FELLGKTLVVMSKLLPYLLVIA---GFTFIYLFLPNTKVRLGSALVGGAVAGILWETIGI 250
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
LF ++ T + Y +Y+ A ++ +++LY+ + ++GA+ + Y+ + P
Sbjct: 251 LFAFFVTTSTKYDAIYSSFAIVILFMIWLYISWLVLLVGAQ------VAYYHQNP 299
>gi|304411738|ref|ZP_07393350.1| ribonuclease BN [Shewanella baltica OS183]
gi|307306210|ref|ZP_07585955.1| ribonuclease BN [Shewanella baltica BA175]
gi|304349926|gb|EFM14332.1| ribonuclease BN [Shewanella baltica OS183]
gi|306911083|gb|EFN41510.1| ribonuclease BN [Shewanella baltica BA175]
Length = 326
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ SLN +R E RS + +++ G VL+ + +LV S+V +
Sbjct: 118 ISAIDKSLNNIWRTKEKRSVVVAFSMYWMVLTLGPVLVGA-SLVASSYVI--------SL 168
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
+ F + +L I+ R+ ML + +++ +P K K + L G I + + +
Sbjct: 169 KVFEAEAISGMLPIFIARL--PMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFEL 226
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
G F Y+ F +Y +Y LA I V++Y+ + +LGAE+ A+M Y
Sbjct: 227 GKKAFALYVTQFPSYEAIYGALAVIPIIFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|260429445|ref|ZP_05783422.1| ribonuclease BN [Citreicella sp. SE45]
gi|260420068|gb|EEX13321.1| ribonuclease BN [Citreicella sp. SE45]
Length = 306
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-FIGLIFVHLFL 200
A+V +V +FVF+ +P + + +A +LA+ F + ++ +
Sbjct: 177 AAVVIVPATFVFLGLPFHVELMVSMLK--------------WAILLAVVFFAIALLYRYG 222
Query: 201 PAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
P + M PG + + W +G+ + T Y+ F + +Y L +++ L++ Y+
Sbjct: 223 PNRRQARMRWFTPGAVLALLGWALGSWVLTTYVRNFDRLNEVYGSLGAVVALLLWFYVSA 282
Query: 260 VFFILGAELNASM 272
+ +LGA+LN +
Sbjct: 283 LVTLLGAQLNGEL 295
>gi|260063160|ref|YP_003196240.1| hypothetical protein RB2501_00081 [Robiginitalea biformata
HTCC2501]
gi|88783254|gb|EAR14426.1| hypothetical protein RB2501_00081 [Robiginitalea biformata
HTCC2501]
Length = 323
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 116/265 (43%), Gaps = 15/265 (5%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFL------GAHQFVPTVIDVVFGAWPEVIAKPITDE 81
AS I+ S L++FP ++F L F+ G F + + P+ + T+
Sbjct: 55 ASAIAFSLFLAIFPLLIFLVTLIPFVIPLVSVGNSNFDAQFLSFLEAFLPQATGEYFTEV 114
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
Q+ GL + + L + +NGV A+ +Y + R+++ + L+
Sbjct: 115 YQQIRDQKQGGLVSSAFLISILLMANGVNAIFGGFENSYHIELTRNFFKQYAYALFVGLI 174
Query: 142 ASVTLVIMSFVFVAIPL-ALAYVRKFFPALGNLLLI------IWNGRIYATMLALFIGLI 194
SV L++ + +V L Y+ +F ++L + G++ +L ++
Sbjct: 175 LSVLLIVGAVFYVYFEFYVLGYLTEFTARNSGVVLDEGEILGVRVGKVLFFILLTYLTTA 234
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F K G + T + ++ + LF YI F+ Y+ +Y L+ ++ +++
Sbjct: 235 ILYYFGTTEGKKAKFFSYGALMTTLLILLTSYLFGVYIDNFARYNELYGALSGLLILMIY 294
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
+++ +LG ELNA++ Y RK
Sbjct: 295 IWLNSNILLLGFELNATL--NYLRK 317
>gi|312113317|ref|YP_004010913.1| ribonuclease BN [Rhodomicrobium vannielii ATCC 17100]
gi|311218446|gb|ADP69814.1| ribonuclease BN [Rhodomicrobium vannielii ATCC 17100]
Length = 344
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 22/254 (8%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGA----HQFVPTVIDVV-FGAWPEVIAKPITDE 81
+A+ ++ ALL++FP +VF + G L F+ T+ DV+ AW + A+ E
Sbjct: 91 LAAGVAFYALLAIFPGLVFFVAVFGLLAETGQVQNFLLTLKDVLPTEAWEAINAQV---E 147
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSN-GVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+L + L T+ +L A+ ++ GV AL +LN YR E RS+ T ++ + L
Sbjct: 148 VLVRQNTTSLSLATMISLGLAFINARLGVYALMSALNGVYRRTETRSFAHTNSLAILFTL 207
Query: 141 LASVTLVIMSFVFVAIP--LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
A L V A+P L + +F A ++ R A + + + L V+
Sbjct: 208 GALAVLAFNILVVAAVPGIFRLVGISEFTNA------VLHYARWPALAIIVALSLAVVYR 261
Query: 199 FLPAAKS---KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ P K + +S+ G + W+ + F+ Y+ F++Y +Y +++ L +L
Sbjct: 262 YGPDRKDAHWRWVSL--GSLAATALWLAASTGFSWYVSAFNSYDRIYGSFGAVVILLYWL 319
Query: 256 YMLGVFFILGAELN 269
++ ++GAEL+
Sbjct: 320 WLTAFAALMGAELD 333
>gi|295093026|emb|CBK82117.1| Predicted membrane protein [Coprococcus sp. ART55/1]
Length = 330
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
LP + +I + +PG FT I W++ + + YI + MY LAS++ ++LYM
Sbjct: 207 LPVERVRIKTAVPGAAFTTILWMLLSFGVSSYINIVGINTYMYGSLASVILLALWLYMCM 266
Query: 260 VFFILGAELNASM 272
++GAE+N M
Sbjct: 267 YVMLIGAEINKFM 279
>gi|284029889|ref|YP_003379820.1| ribonuclease BN [Kribbella flavida DSM 17836]
gi|283809182|gb|ADB31021.1| ribonuclease BN [Kribbella flavida DSM 17836]
Length = 346
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 81 EILQVLAVPAKGLFT--ISALAAAYFS-SNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
++ + A P +GL + ALA A +S S GV L ++N AY E R ++ R +
Sbjct: 129 QVESLAAAPQQGLGIGLVIALATALWSASGGVGYLISAVNLAYDEEETRG-FVKRKLLAL 187
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L ++ V+++ +A+ A + + LL + R+ ++ + I L V+
Sbjct: 188 GLTLGAIVFVLLAAGLLAVG---ALIDDSSTVVRVLLQV---ARLAVAIILITIALAVVY 241
Query: 198 LFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
P + M + G + W++ ++ F+ Y+ TF Y+ Y LA++ L++L+
Sbjct: 242 RVAPDRDAPRMRWVSVGAAVATVIWLLASIGFSVYVSTFGNYAKTYGSLAAVAILLLWLW 301
Query: 257 MLGVFFILGAELNAS 271
+ +LGAE+NA
Sbjct: 302 LTAYAILLGAEINAE 316
>gi|77414094|ref|ZP_00790262.1| putative ribonuclease BN [Streptococcus agalactiae 515]
gi|77159846|gb|EAO70989.1| putative ribonuclease BN [Streptococcus agalactiae 515]
Length = 196
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 23/180 (12%)
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV----AIPLALA 161
S + +L+ ++N+AY V + R + I+RL+ G L + L +++FV + + P+
Sbjct: 1 SKSLTSLQKAINKAYGVDQHRDFVISRLVGVGTGL---IILFLLTFVLIFSTFSKPVLQI 57
Query: 162 YVRKFFPALGNLLLI-IWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWI 219
V + LG+ L + N T L +F+G+ ++ LP A+ K+ ++PG +F+
Sbjct: 58 IVNMY--DLGDTLTAWLLNLAQPVTFLTIFLGIGILYFILPNARIRKVRYVIPGTLFS-- 113
Query: 220 SWVVG--AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF-----ILGAELNASM 272
++V+G + L + Y++ + + + ++F+ ML F ILGA LNAS+
Sbjct: 114 TFVIGFFSNLISQYVL---NRVEKMVDIKTFGSVVIFILMLWFIFLAHIMILGAILNASV 170
>gi|227890331|ref|ZP_04008136.1| possible ribonuclease BN [Lactobacillus johnsonii ATCC 33200]
gi|227849145|gb|EEJ59231.1| possible ribonuclease BN [Lactobacillus johnsonii ATCC 33200]
Length = 302
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 16/246 (6%)
Query: 36 LLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
LLS+FP I+ N+ L + + ++++F P I+ I I +L + G
Sbjct: 40 LLSIFPIIIIIGNVLPLLNIDTEPIARYLELIF---PSQISSLIMPIINALLKKHSSGFI 96
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEM---RSWYITRLISFGYVLLASVTLVIMSF 151
++ + A + S V ++R++ N+ Y V + +SW+ L++ + + SV LV+
Sbjct: 97 SLGIVIAIWSLSCLVNSIRLAANKIYGVDKKEKGKSWW-NYLLARTFTFVLSVILVVGFS 155
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIW------NGRIYATMLALFIGLIFVHLFLPAAKS 205
+ + + + +F + NL L W N R +L + I ++++ +P
Sbjct: 156 IIIFVVTFGRQIMEFLAPIFNLSL--WWVYKLENYRWPIIILVMVIINLYINYVIPNITV 213
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + PGV FT +SW + F Y+ F T Y + S + +++L + +LG
Sbjct: 214 RKRIVWPGVWFTVVSWSALSYFFGLYLRQFGTRWQNYGIVGSFIIFMLWLNVGSFLLLLG 273
Query: 266 AELNAS 271
LNA+
Sbjct: 274 ICLNAT 279
>gi|77359142|ref|YP_338717.1| ribonuclease BN [Pseudoalteromonas haloplanktis TAC125]
gi|123588858|sp|Q3IJ43|Y171_PSEHT RecName: Full=UPF0761 membrane protein PSHAa0171
gi|76874053|emb|CAI85274.1| tRNA processing exoribonuclease BN; required for maturation of tRNA
encoded by bacteriophages; dimer [Pseudoalteromonas
haloplanktis TAC125]
Length = 300
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 48/278 (17%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFG----ANLAGFLGAH---------QFVPTV 62
I +++ A +++ LLS+ P I G + GF FVPT
Sbjct: 27 INRCIDDQITVNAGYLAYVTLLSLVPLIAVGVAIFSAFPGFESTRLAIESFLFTNFVPTS 86
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
DV I + I+ + A G+ ++A+A + + +LNR +R+
Sbjct: 87 SDV--------IKEHISSFAGNANQMTAVGIGFLAAIALLL-----IRNVDATLNRIWRI 133
Query: 123 VEMRSWYIT-----RLISFGYVLLA---SVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ R I+ ++S G V L +VT I+S V ++ + P L
Sbjct: 134 KKKRPMMISFAVYWMVLSLGPVFLGGSIAVTSYIVSLV--------SFADQGIPGFSGFL 185
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
L + I +G I ++ +P + + +PG +F + + + F YI
Sbjct: 186 LKLLPYGIS------MVGFIMLYTLVPNTRVSFKAAIPGALFAAMLFELTKKGFALYISH 239
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F +Y +Y +A+I V++Y+ + +LGAEL A +
Sbjct: 240 FPSYEVIYGAVATIPILFVWIYLSWIVVLLGAELTACI 277
>gi|21219215|ref|NP_624994.1| hypothetical protein SCO0686 [Streptomyces coelicolor A3(2)]
gi|6425606|emb|CAB60467.1| putative membrane protein [Streptomyces coelicolor A3(2)]
Length = 407
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
F +++ A+ ++ +L++FP ++ +L G G V+D V P
Sbjct: 113 EFKDDELTDRAAALTYYGILALFPALLVLVSLLGIAG-DSATQEVLDNVKKLAPGSARDV 171
Query: 78 ITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS-WYITRLI 134
+T+ + Q+ A G + + L A +S++G V A S N Y V E R W + L
Sbjct: 172 LTNAVEQLQAKAGLGSVLAVVGLVGAVWSASGYVAAFIRSANAVYDVPEGRPVWKV--LP 229
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + + L ++S + V +LA +G+ L +W+ + +L L + +
Sbjct: 230 LRVALTVVLLVLAVVSALIVVFTGSLARQAGTALGVGDTALTVWSIAKW-PVLVLLVTFM 288
Query: 195 FVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L+ A +++ I PG + + W++ + F Y+ F +Y+ Y LA ++
Sbjct: 289 IAILYWAAPNARVKGFKWISPGSLVALLIWLLASAGFAFYVANFGSYNKTYGTLAGVIIF 348
Query: 252 LVFLYMLGVFFILGAELNASM 272
LV+L++ + +LG E +A +
Sbjct: 349 LVWLWVTNLAILLGLEFDAEL 369
>gi|302539626|ref|ZP_07291968.1| ribonuclease BN [Streptomyces hygroscopicus ATCC 53653]
gi|302457244|gb|EFL20337.1| ribonuclease BN [Streptomyces himastatinicus ATCC 53653]
Length = 395
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 118/264 (44%), Gaps = 12/264 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
++ F +++ A+ ++ +LS+FP ++ +L G G V+ + P
Sbjct: 99 SLREFKDDELTDRAAALTYYGVLSLFPALLVLVSLVGIAG-KSTTDEVLSNLKQLAPGSA 157
Query: 75 AKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITR 132
IT + Q+ G + I+ L A +S++G V A + N Y + E R +
Sbjct: 158 RDLITRTVEQLQGNGGTGSIMAITGLVLAVWSASGYVAAFIRASNAVYEMPEGRPAWKIL 217
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLLIIWNGRIYATMLALF 190
+ G ++ V V + + V R+ ALG + L +W+ + +L +
Sbjct: 218 PVRVGVTVVLMVLTVASALIVV---FTGGLARQTGAALGIGDTTLTVWSIAKW-PVLVIL 273
Query: 191 IGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
I ++ L+ A +K+ I PG + W++ + FT Y+ F++Y+ Y +A
Sbjct: 274 ITVMLALLYWAAPNAKVKKFRWITPGSFLALVIWMIVSAGFTFYVANFASYNKTYGTMAG 333
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
++ LV+L++ + +LG E +A
Sbjct: 334 VIVFLVWLWISNLAILLGLEFDAE 357
>gi|75909322|ref|YP_323618.1| ribonuclease BN [Anabaena variabilis ATCC 29413]
gi|75703047|gb|ABA22723.1| Ribonuclease BN [Anabaena variabilis ATCC 29413]
Length = 321
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 121/260 (46%), Gaps = 23/260 (8%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL-- 83
+ S I+ +A+LS+FP I+ GF F ++ D F +++ +E +
Sbjct: 53 GLGSEIAFNAMLSLFPAILAVLTAIGF-----FADSLQDT-FRQLAAQLSQVAPEEAMVL 106
Query: 84 -------QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE--MRSWYITRLI 134
++ GLF++S + A + +S V + ++ +++ + +R ++ ++L+
Sbjct: 107 IREFAGREIANSRNSGLFSLSFVIAIWTASGAVSTAMTAFDQIHQIPQEKIRPFWQSKLV 166
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI--- 191
S G + + LV+ SF+ L L V AL LL +W ++ LAL I
Sbjct: 167 SLGLTVGTILLLVLASFLVFISDLLLGMVVNKNGAL-IFLLHLW--QLLRWPLALGIVAT 223
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
F++ + + I+PG I I W + + LF Y+ F Y+ +Y + +++
Sbjct: 224 AFSFIYRYGTSVWKPGTPIMPGAIIAAIFWAILSALFRLYVANFGNYNKVYGAVGTVIVL 283
Query: 252 LVFLYMLGVFFILGAELNAS 271
+++L+M ++G +LN +
Sbjct: 284 MLWLWMSAAVLLIGDQLNVT 303
>gi|332670932|ref|YP_004453940.1| ribonuclease BN [Cellulomonas fimi ATCC 484]
gi|332339970|gb|AEE46553.1| ribonuclease BN [Cellulomonas fimi ATCC 484]
Length = 361
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 216 FTWIS---------WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
F WIS W + +V F Y+ TF++Y Y LA ++ L++L++ + + GA
Sbjct: 239 FRWISVGAAVALLVWALASVAFGFYVTTFASYDATYGSLAGVVVFLLWLWISNLALLFGA 298
Query: 267 ELNASM 272
EL+A +
Sbjct: 299 ELDAEL 304
>gi|254418863|ref|ZP_05032587.1| Ribonuclease BN-like family [Brevundimonas sp. BAL3]
gi|196185040|gb|EDX80016.1| Ribonuclease BN-like family [Brevundimonas sp. BAL3]
Length = 434
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 20/255 (7%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A ++ LLS+FP + L G + + ++G P IA + E ++ L
Sbjct: 125 VAGGVTFFTLLSLFPLLGTFVTLYGLFADPADAWSRLQFLYGVMPSSIAAFLGGE-MERL 183
Query: 87 AVPAKGLFTIS---ALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A + G T + LA + +++NG V+ L LN AY VE R+ L+ G+ L A
Sbjct: 184 AANSNGQLTFTLIWTLALSLWTANGAVKVLFYGLNIAYHEVERRNIVRYNLLCMGFTLGA 243
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG----LIFVHL 198
++ S + V +P+ + L W L +G L ++
Sbjct: 244 VAAVLFSSLLVVGVPVVVGLF---------GLQEEWGLLALLRWPLLLVGYVAALTLIYR 294
Query: 199 FLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F P K++ + PG IF + + + +F+ Y+ F + Y LA++M L++ ++
Sbjct: 295 FGPCRQKARWRWLTPGAIFAAVVSLTVSFVFSWYLTNF-VRTDSYGPLAAMMGFLLWTWL 353
Query: 258 LGVFFILGAELNASM 272
++GAELNA +
Sbjct: 354 SVQVILMGAELNAEI 368
>gi|297561757|ref|YP_003680731.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296846205|gb|ADH68225.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 336
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 19/221 (8%)
Query: 53 LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
L A P +D V +P+ D+ L VP G+ +++ L + + S +
Sbjct: 89 LTARVLTPDTVDSVV--------EPLVDDFLG--GVPG-GVLSVTFLVSLWSGSRAMNVF 137
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALG 171
S+ +Y + E+R W R+++F L + +++ V VA P V + P +G
Sbjct: 138 IRSITISYGLDELRGWVRQRVLAFVAYLGGLLFAILLLPVLVAGP---DLVNRLLPMTVG 194
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
L L W +LA+ + L +P ++ + LPG + + + G+V Y
Sbjct: 195 RLNLFYWP---TVALLAVAAVTLLYALSVPV-RTPLWRHLPGALLAALVLITGSVALRVY 250
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ T+Y LA+ + L +L+++ + ++G+ NA +
Sbjct: 251 LDASFGQVTIYGSLAAPIAILAWLFVMAIAVLVGSSFNAEI 291
>gi|332638721|ref|ZP_08417584.1| hypothetical protein WcibK1_08523 [Weissella cibaria KACC 11862]
Length = 296
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 14/277 (5%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M E +F+ +I I+ + D +S I+ LLS+FP I+ A L + G
Sbjct: 1 MSEIIKRIFNNRVIKTIIDVSMRVDIVTASSSIAYFGLLSIFPAIIIIATLLPYFGLT-- 58
Query: 59 VPTVIDVVFGAWPEVI---AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ T + V A P + A+PI + IL V G+ + S + + S V ++R +
Sbjct: 59 ISTALSYVQMAVPTSVYDFARPIIESILGQKGV---GVLSASIIITLWSLSRVVASIRTA 115
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
N Y V I R IS +++L L IM + + + + + + P NL+
Sbjct: 116 QNGIYGVQPKTIAIIDRFISMAWMIL---VLGIMGILLIIASVG-SNILEALPISANLVQ 171
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I + + + LFIG + LP K ++ L G I + A +F Y+
Sbjct: 172 QIESAKSPVVIGGLFIGASLFNWVLPVKKPRLQWALVGTIVQVAIVIWLAKIFGWYVSLA 231
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
S T Y L+S + L+++ + + ++G + A++
Sbjct: 232 SQAYTFYQALSSAIILLLWINFIALAALIGTIVTATL 268
>gi|290958769|ref|YP_003489951.1| ribonuclease [Streptomyces scabiei 87.22]
gi|260648295|emb|CBG71406.1| putative ribonuclease [Streptomyces scabiei 87.22]
Length = 356
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 11/218 (5%)
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNG-VEALRISLNRA 119
V+D + P +T+ + Q+ G + I L A +S++G V A S N
Sbjct: 101 VLDNIQKLAPGAARDVLTNAVQQMQNNAGLGSVMAIVGLVLAVWSASGYVAAFIRSANAV 160
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLLII 177
Y + E R + + G ++ V VI + + V R+ ALG + L +
Sbjct: 161 YDIPEGRPVWKVLPVRVGLTMVLMVMAVISALIVV---FTGGLAREVGTALGVGDTALTV 217
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVT 234
W+ + ++ L + ++ L+ +K+ I PG + + W+ + F Y+
Sbjct: 218 WSIAKWPVLI-LLVTMMIAVLYWATPNAKVRGFRWITPGSLLALLIWMAASAGFAFYVAN 276
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F +Y+ Y +A ++ LV+L++ + +LG E +A +
Sbjct: 277 FGSYNKTYGAVAGVIIFLVWLWITNLAILLGLEFDAEL 314
>gi|83591770|ref|YP_425522.1| ribonuclease BN [Rhodospirillum rubrum ATCC 11170]
gi|83574684|gb|ABC21235.1| Ribonuclease BN [Rhodospirillum rubrum ATCC 11170]
Length = 313
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 20/256 (7%)
Query: 27 MASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
+A+ ++ +LL+ FP +V L G F G + V + + G + + E L
Sbjct: 46 LAAGVAFFSLLASFPALVTLITLYGLFTGPQEAVRQIAEA--GVYLPRGVHDLLAEHLPR 103
Query: 86 LAVPAKGLFTISALAAAYFS----SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
LA + G + A+ + FS S G+ A+ ++ AY+V + R + ++ G L
Sbjct: 104 LAQASPGSLGLGAITSLLFSIWSASRGMGAMVDGVDIAYQVGDGRGFLRKSILVVGLTLA 163
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI--YATMLALFIGLIFVHLF 199
V I + V +P F L L I W + + + AL +G + V LF
Sbjct: 164 GLVVSAIALPLIVGLP-------ALFDRLPLPLEIRWALALARWPLLFALVLGALAV-LF 215
Query: 200 LPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
A + + PG + W++ + + Y+ S+Y Y LA ++ +++LY
Sbjct: 216 RYAPDRENPRWRWVTPGALAAATLWILASGGLSLYVGLVSSYDQTYGTLAGVVVAMMWLY 275
Query: 257 MLGVFFILGAELNASM 272
+ +LGAE+NA +
Sbjct: 276 LASYAVLLGAEINAEL 291
>gi|126462086|ref|YP_001043200.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17029]
gi|126103750|gb|ABN76428.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17029]
Length = 324
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
F +S L A + +++G++AL ++N A+ E RS+ L+SF L A V V M
Sbjct: 117 FVLSFLIAFWSANSGMKALIEAMNIAHEEREKRSFVKLTLLSFALTLGAMVLAVTM---- 172
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS-ILP 212
+ + V F ++W R +L + + ++ + P+ + +
Sbjct: 173 IVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLLLLVATAMAGLYRWAPSRNAPEWRWVTW 232
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
G + W++ ++ FT Y+ F+ YS Y L +++ L+++++ + I+GAE+N+ M
Sbjct: 233 GSGLATLVWLIASIAFTIYLENFANYSATYGSLGALVGLLLWVWIAVMILIVGAEVNSEM 292
>gi|157373443|ref|YP_001472043.1| ribonuclease BN [Shewanella sediminis HAW-EB3]
gi|157315817|gb|ABV34915.1| putative ribonuclease BN [Shewanella sediminis HAW-EB3]
Length = 298
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ +LN +R E RS ++ +++ G VL+ + +LV S+V + +
Sbjct: 98 ISAIDKALNNIWRTTEKRSMVVSFSMYWMVLTLGPVLMGA-SLVATSYVVSLKVFNGSDL 156
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
P L L + ++ +A F+ +++ +P K K L G I + +
Sbjct: 157 SGVVPVLVERLPMFFS-------VATFL---LIYMVVPNIKVKFFHALLGAIVAALLFEF 206
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
G F Y+ F TY +Y LA+I +++Y+ + +LGAE+ A+M Y +++
Sbjct: 207 GKKGFAIYLTKFPTYEAIYGALATIPILFMWVYLSWIIVLLGAEITAAMPEYLDKRQ 263
>gi|332558089|ref|ZP_08412411.1| Ribonuclease BN family protein [Rhodobacter sphaeroides WS8N]
gi|332275801|gb|EGJ21116.1| Ribonuclease BN family protein [Rhodobacter sphaeroides WS8N]
Length = 322
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
F +S L A + +++G++AL ++N A+ E RS+ L+SF L A V V M
Sbjct: 115 FVLSFLIAFWSANSGMKALIEAMNIAHEEREKRSFVKLTLLSFALTLGAMVLAVTM---- 170
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS-ILP 212
+ + V F ++W R +L + + ++ + P+ + +
Sbjct: 171 IVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLLLLVATAMAGLYRWAPSRNAPEWRWVTW 230
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
G + W++ ++ FT Y+ F+ YS Y L +++ L+++++ + I+GAE+N+ M
Sbjct: 231 GSGLATLVWLIASIAFTIYLENFANYSATYGSLGALVGLLLWVWIAVMILIVGAEVNSEM 290
>gi|190894365|ref|YP_001984658.1| putative ribonuclease [Rhizobium etli CIAT 652]
gi|190700026|gb|ACE94108.1| putative ribonuclease protein [Rhizobium etli CIAT 652]
Length = 358
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + V+ F P+ + ++I + G T ++W V ++ F+ Y+ F+ Y+ Y L +++
Sbjct: 244 VAVTLVYRFGPSREPARIRWMTWGAALTTLAWAVMSIGFSFYLDHFANYNATYGTLGALI 303
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L+++++ V I+GAELNA +
Sbjct: 304 GFLIWIWLSVVILIVGAELNAEL 326
>gi|312864831|ref|ZP_07725062.1| YihY family protein [Streptococcus downei F0415]
gi|311099958|gb|EFQ58171.1| YihY family protein [Streptococcus downei F0415]
Length = 322
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LL++FP IV AN+ +L +P V+ + P I + + + A P+ G+
Sbjct: 37 LLTIFPLIVIAANIFPYLDID--LPDVLSFLRANLPSEIYANVAGIVRNLFATPSNGILG 94
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
++ LA + S + +L+ + N+AY V + R
Sbjct: 95 VATLAGFWTMSRSLTSLQKAFNKAYDVSQHRD 126
>gi|221639073|ref|YP_002525335.1| Ribonuclease BN family protein [Rhodobacter sphaeroides KD131]
gi|221159854|gb|ACM00834.1| Ribonuclease BN family protein [Rhodobacter sphaeroides KD131]
Length = 322
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
F +S L A + +++G++AL ++N A+ E RS+ L+SF L A V V M
Sbjct: 115 FVLSFLIAFWSANSGMKALIEAMNIAHEEREKRSFVKLTLLSFALTLGAMVLAVTM---- 170
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
+ + V F ++W R +L + + ++ + P+ + +
Sbjct: 171 IVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLLLLVATAMAGLYRWAPSRNAPEWRWV-- 228
Query: 214 VIFTWIS------WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
TW S W++ ++ FT Y+ F+ YS Y L +++ L+++++ + I+GAE
Sbjct: 229 ---TWGSGIATLVWLIASIAFTIYLENFANYSATYGSLGALVGLLLWVWIAVMILIVGAE 285
Query: 268 LNASM 272
+N+ M
Sbjct: 286 VNSEM 290
>gi|288559253|sp|A8FPZ2|Y302_SHESH RecName: Full=UPF0761 membrane protein Ssed_0302
Length = 318
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 31/252 (12%)
Query: 35 ALLSVFP-FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
++LS FP F + GF+ + F+P D V E ++ + + A+ +
Sbjct: 57 SMLSAFPVFSGIRGQIEGFI-YNNFLPAAGDTVQVYINEFVSNASKGTAVGIAALMVVAI 115
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVI 148
ISA+ A LN +R E RS ++ +++ G VL+ + +LV
Sbjct: 116 MLISAIDKA-------------LNNIWRTTEKRSMVVSFSMYWMVLTLGPVLMGA-SLVA 161
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
S+V + + P L L + ++ +A F+ +++ +P K K
Sbjct: 162 TSYVVSLKVFNGSDLSGVVPVLVERLPMFFS-------VATFL---LIYMVVPNIKVKFF 211
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
L G I + + G F Y+ F TY +Y LA+I +++Y+ + +LGAE+
Sbjct: 212 HALLGAIVAALLFEFGKKGFAIYLTKFPTYEAIYGALATIPILFMWVYLSWIIVLLGAEI 271
Query: 269 NASMIIYYWRKK 280
A+M Y +++
Sbjct: 272 TAAMPEYLDKRQ 283
>gi|312887237|ref|ZP_07746841.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
gi|311300549|gb|EFQ77614.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
Length = 320
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLIIWN 179
++++ R + +I+ G++LL +S V LAL+ ++ F P + +LL + N
Sbjct: 140 KLIKDRLLSSSLIITLGFLLL-------VSLVVNGALLALSDRLKNFLPDITVILLSVIN 192
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I ++A+ G+IF LP AK ++ G IFT I +++G ++ YI T S
Sbjct: 193 IVISFIVIAVLFGIIFK--MLPDAKIAWKDVVSGAIFTAILFMIGRLVIGIYIDQSGTSS 250
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAE 267
T Y S++ L+++Y GAE
Sbjct: 251 T-YGAAGSLIVILLWIYYTAAILYFGAE 277
>gi|242279976|ref|YP_002992105.1| ribonuclease BN [Desulfovibrio salexigens DSM 2638]
gi|242122870|gb|ACS80566.1| ribonuclease BN [Desulfovibrio salexigens DSM 2638]
Length = 456
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 120/262 (45%), Gaps = 21/262 (8%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGAWPEVIAKPITDEILQV 85
AS ++ + +LS+ PF+ +L +G ++ ++ V EV+ K + E +
Sbjct: 56 ASALTFTTMLSIVPFLAVAFSLMKGMGFQDSSYIQEMLLKVSAGREEVVGKIL--EYVDN 113
Query: 86 LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
V G ++ L S+ G + + N ++V R+++ F + + V
Sbjct: 114 TNVQTLGWIGVATLLFTVLSTVGT--VEKAFNIIWKVSHGRTFWRKFTDFFSVIFICPVA 171
Query: 146 LVIMSFVFVAIPLALAYVRKF-----FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+++ + V V+I A +++F L + L+ + A ++ +++ F++ F+
Sbjct: 172 VIVATSVSVSIK-KQAVLQQFGSIYGITELESFLISL------APLVLIWLSFTFIYAFM 224
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P K +I S L G + W + + ++ + + Y+ +Y A + LV+LY V
Sbjct: 225 PNTKVRITSALAGGVVAGTVWQMAQWAYINWQIGVTKYNAIYGSFAQLPLFLVWLYASWV 284
Query: 261 FFILGAELN---ASMIIYYWRK 279
+LG+E++ ++++Y +K
Sbjct: 285 IVLLGSEISYAVQNVMLYRQQK 306
>gi|117918768|ref|YP_867960.1| ribonuclease BN [Shewanella sp. ANA-3]
gi|166199586|sp|A0KRY5|Y311_SHESA RecName: Full=UPF0761 membrane protein Shewana3_0311
gi|117611100|gb|ABK46554.1| tRNA-processing RNAse BN [Shewanella sp. ANA-3]
Length = 337
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 36/182 (19%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ SLN +R E RS + +I+ G VL+ + +LV S+V
Sbjct: 118 ISAIDKSLNNIWRTKEKRSVVVAFSMYWMVITLGPVLVGA-SLVATSYV----------- 165
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFI----------GLIFVHLFLPAAKSKIMSILPG 213
+ L ++ G + ++ LFI + +++ +P K K L G
Sbjct: 166 ---------VSLKLFEGDALSGVMPLFIERLPMLFSVAAFLLLYMVVPNQKVKFWHALLG 216
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + +G F Y+ F +Y +Y LA+I V++Y+ + +LGAE+ A+M
Sbjct: 217 AVVAALLFELGKKGFALYVTKFPSYEAIYGALATIPILFVWVYLSWMIVLLGAEITAAMP 276
Query: 274 IY 275
Y
Sbjct: 277 EY 278
>gi|197105285|ref|YP_002130662.1| hypothetical protein PHZ_c1822 [Phenylobacterium zucineum HLK1]
gi|196478705|gb|ACG78233.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 367
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 214 VIFTWISWVVGAVL---------FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
V + WISW A L F+ Y+ F+ Y Y L +++ L++LY+ +L
Sbjct: 269 VRWRWISWGSAAALILWLAVSAAFSIYVANFADYEKTYGSLGAVIGFLMWLYLSAQVVLL 328
Query: 265 GAELNASM 272
GAELN+ +
Sbjct: 329 GAELNSEI 336
>gi|114777916|ref|ZP_01452830.1| hypothetical protein SPV1_05824 [Mariprofundus ferrooxydans PV-1]
gi|114551703|gb|EAU54255.1| hypothetical protein SPV1_05824 [Mariprofundus ferrooxydans PV-1]
Length = 433
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 121/275 (44%), Gaps = 43/275 (15%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFG----ANLAGF--LGAH-------QFV 59
Y E F+ + AS ++ ++LL++ P + G + F + H +
Sbjct: 24 YRVAERFIVDKCIQRASALAYASLLAIVPMVALGFSIFTSFQAFDAISGHVRDALLGYLI 83
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
PT V V K I VL + LFT +AL N VE + N
Sbjct: 84 PTSQQAVENYLGTVTDKTTAISIFGVLGL----LFTATALL------NTVEE---AFNTI 130
Query: 120 YRVVEMRSWYITRLISFGYVL-----LASVTLVIMSFVFVAIPLALAYVRKFFPALGNL- 173
+R+ R+W +++ I+F L L +L I S+ F A+PL L +V + L ++
Sbjct: 131 WRITRARAW-LSKFITFWATLTLTPILIGASLSITSY-FAAMPL-LQHVAEGAGYLSHIP 187
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L+ W I +++ + ++ + +P + + ++ G +F W + FT YI
Sbjct: 188 FLLPW---ILSSLALTTLYVVLPNTTVPFRYAVVGGLVGGALFEWTK-----IGFTFYIT 239
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ Y +Y L+++ L++LY+ V +LG+E+
Sbjct: 240 EIADYEKLYGALSTLPVFLIWLYLTWVVVLLGSEI 274
>gi|114049195|ref|YP_739745.1| ribonuclease BN [Shewanella sp. MR-7]
gi|122944315|sp|Q0HQB7|Y3708_SHESR RecName: Full=UPF0761 membrane protein Shewmr7_3708
gi|113890637|gb|ABI44688.1| tRNA-processing RNAse BN [Shewanella sp. MR-7]
Length = 337
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 36/182 (19%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ SLN +R E RS + +I+ G VL+ + +LV S+V
Sbjct: 118 ISAIDKSLNNIWRTKEKRSVVVAFSMYWMVITLGPVLVGA-SLVATSYV----------- 165
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFI----------GLIFVHLFLPAAKSKIMSILPG 213
+ L ++ G + ++ LFI + +++ +P K K L G
Sbjct: 166 ---------VSLKLFEGDALSGVMPLFIERLPMLFSVAAFLLLYMVVPNQKVKFWHALLG 216
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + +G F Y+ F +Y +Y LA+I V++Y+ + +LGAE+ A+M
Sbjct: 217 AVVAALLFELGKKGFALYVTKFPSYEAIYGALATIPILFVWVYLSWMIVLLGAEITAAMP 276
Query: 274 IY 275
Y
Sbjct: 277 EY 278
>gi|113968660|ref|YP_732453.1| ribonuclease BN [Shewanella sp. MR-4]
gi|123325453|sp|Q0HNH1|Y316_SHESM RecName: Full=UPF0761 membrane protein Shewmr4_0316
gi|113883344|gb|ABI37396.1| tRNA-processing RNAse BN [Shewanella sp. MR-4]
Length = 337
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 36/182 (19%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ SLN +R E RS + +I+ G VL+ + +LV S+V
Sbjct: 118 ISAIDKSLNNIWRTKEKRSVVVAFSMYWMVITLGPVLVGA-SLVATSYV----------- 165
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFI----------GLIFVHLFLPAAKSKIMSILPG 213
+ L ++ G + ++ LFI + +++ +P K K L G
Sbjct: 166 ---------VSLKLFEGDALSGVMPLFIERLPLFFSVAAFLLLYMVVPNQKVKFWHALLG 216
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + +G F Y+ F +Y +Y LA+I V++Y+ + +LGAE+ A+M
Sbjct: 217 AVVAALLFELGKKGFALYVTKFPSYEAIYGALATIPILFVWVYLSWMIVLLGAEITAAMP 276
Query: 274 IY 275
Y
Sbjct: 277 EY 278
>gi|159043554|ref|YP_001532348.1| putative ribonuclease BN [Dinoroseobacter shibae DFL 12]
gi|157911314|gb|ABV92747.1| putative ribonuclease BN [Dinoroseobacter shibae DFL 12]
Length = 318
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 14/243 (5%)
Query: 23 DGWAM---ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
DGW + ++ ++ LL++FP + + G + V + +V P+ + I
Sbjct: 35 DGWNIGLISAGVAFYGLLAIFPALAAVIAIWGLVADPMVVDQQMALVGELMPQEAYRLID 94
Query: 80 ---DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
D + Q + +S LAA + + GV AL LN Y +SW L +
Sbjct: 95 AQIDALTQTTSSTLGWATLLSILAALWSTRAGVSALMRGLNAIYGTPNRKSWR-HYLAAL 153
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA-LFIGLIF 195
+ + ++ V P+ LA F P LG+ + G + + L GL
Sbjct: 154 SLTAVLVLVALVALTAVVITPIVLA----FLP-LGSWTELALRGTRWVVAIGVLLAGLSI 208
Query: 196 VHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
V+ + P K+ + PG I + W ++ F++Y+ F Y+ +Y + +++ L++
Sbjct: 209 VYRYGPNRTCVKMQWLTPGSIAVVVLWAAASLGFSYYLSNFGNYNEVYGSIGAVIALLMW 268
Query: 255 LYM 257
LY+
Sbjct: 269 LYI 271
>gi|42519468|ref|NP_965398.1| hypothetical protein LJ1594 [Lactobacillus johnsonii NCC 533]
gi|268319158|ref|YP_003292814.1| hypothetical protein FI9785_671 [Lactobacillus johnsonii FI9785]
gi|41583756|gb|AAS09364.1| hypothetical protein LJ_1594 [Lactobacillus johnsonii NCC 533]
gi|262397533|emb|CAX66547.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
gi|329667010|gb|AEB92958.1| ribonuclease [Lactobacillus johnsonii DPC 6026]
Length = 302
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 114/246 (46%), Gaps = 16/246 (6%)
Query: 36 LLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
LLS+FP I+ N+ L + + ++++F + + PI + +L+ + G
Sbjct: 40 LLSIFPIIIIIGNVLPLLNIDTEPIARYLELIFPSQVSSLIMPIINALLKK---HSSGFI 96
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEM---RSWYITRLISFGYVLLASVTLVIMSF 151
++ + A + S V ++R++ N+ Y V + +SW+ L++ + + SV LV+
Sbjct: 97 SLGIVIAIWSLSCLVNSIRLAANKIYGVDKKEKGKSWW-NYLLARTFTFVLSVILVVGFS 155
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIW------NGRIYATMLALFIGLIFVHLFLPAAKS 205
+ + + + +F + NL L W N R +L + I ++++ +P
Sbjct: 156 IIIFVVTFGRQIMEFLAPIFNLSL--WWVYKLENYRWPIIILVMVIINLYINYVIPNITV 213
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + PGV FT +SW + F Y+ F T Y + S + +++L + +LG
Sbjct: 214 QKRIVWPGVWFTVVSWSALSYFFGLYLRQFGTRWQNYGIVGSFIIFMLWLNVGSFLLLLG 273
Query: 266 AELNAS 271
LNA+
Sbjct: 274 ICLNAT 279
>gi|302532213|ref|ZP_07284555.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
gi|302441108|gb|EFL12924.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
Length = 381
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 121/267 (45%), Gaps = 8/267 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN---LAGFLGAHQFVPTVIDVVF 67
++ + F +++ A+ ++ +L++FP ++ + +AG Q + + +
Sbjct: 65 VLRGTVREFGDDELADRAAALTYYGVLALFPGLLVLVSLLGIAGDSVTRQVLDQLQALTP 124
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
GA +VI++ + E L+ A + L + + A + +S V A + N Y V E R
Sbjct: 125 GAARDVISEAV--ERLRADAGVSSFLAAVGPVVAVWSASGYVGAFIRAANAVYDVPEGRP 182
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + G + + L + S + V LA +G+ + +W+ + +L
Sbjct: 183 VWRVLPLRLGLTVTL-MGLAVASALIVVFTGGLARRAGAALGVGDTAMAVWSTVKWPVLL 241
Query: 188 ALFIGLIFV-HLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L +I + + P A+ + + PG + + W+ + F Y+ F++Y+ Y L
Sbjct: 242 VLVTAMIAILYWAAPNARGRGFRWVSPGSVLALVIWMTASGGFAFYVAHFASYNRTYGTL 301
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
A ++ LV+L++ + +LG E +A +
Sbjct: 302 AGVIIFLVWLWITNLAVLLGLEFDAEL 328
>gi|149375985|ref|ZP_01893751.1| ribonuclease BN-like family protein [Marinobacter algicola DG893]
gi|149359622|gb|EDM48080.1| ribonuclease BN-like family protein [Marinobacter algicola DG893]
Length = 440
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 110/243 (45%), Gaps = 18/243 (7%)
Query: 34 SALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG 92
+ LLS+ P + ++ LG HQ + P + P+ + I ++IL + G
Sbjct: 61 TTLLSIVPLLALSFSVLKALGVHQRMEPFLFQFFRPMGPQGVE--IAEQILGFVDNMKVG 118
Query: 93 LFTISALAA-AYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
+ LA Y + V+ + S N +RV +MRS R ++ V++ L++ +
Sbjct: 119 VLGSVGLALLVYTVVSLVQKIERSFNMIWRVPDMRS-MAQRFSNYLSVIMVGPLLMVSAI 177
Query: 152 VFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIYATMLALFI----GLIFVHLFLPAAKS 205
A + A+V+ LG+++ ++AT F+ FV++F+P +
Sbjct: 178 GISATIFSSAFVQALMEIEPLGSMI-------VFATRFTPFMLVVGAFTFVYVFIPNTRV 230
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
K+ G + ISW +LF ++ + Y+ +Y+ A + L+++Y+ + +LG
Sbjct: 231 KLRYAFIGGLVAGISWQAAGMLFASFVAGSAKYAAIYSSFAIGIILLIWVYLNWMILLLG 290
Query: 266 AEL 268
+ +
Sbjct: 291 SSI 293
>gi|162454801|ref|YP_001617168.1| putative tRNA processing ribonuclease BN [Sorangium cellulosum 'So
ce 56']
gi|161165383|emb|CAN96688.1| putative tRNA processing ribonuclease BN [Sorangium cellulosum 'So
ce 56']
Length = 368
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 32/269 (11%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
++ I +G AS ++ A LS+ P F AG++ ++ V+ + A
Sbjct: 32 VWSVIVSLDRHNGPRAASAMAFDAFLSLIPLAAF----AGYVLSRVQRWSDVVVRPILQA 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P +A +++E++++ A +I+ + +S+G+ + Y E R WY
Sbjct: 88 APPDVATLVSEELIRLSQSSAVAPISITGFL--WITSSGISTAMGVFDTIYNTRE-RPWY 144
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R I+ V+ AS+ +V + + +G L RI A AL
Sbjct: 145 VRRAIAAACVM-ASLAVVPVVAGVGVL-------------IGTLSGST-GARIVA--FAL 187
Query: 190 FIGLI------FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
GL+ F + + + I PG + T + W + LF+ Y+ T Y+T Y
Sbjct: 188 PGGLVICMVAAFFRISIQRPNIERRRIFPGAVLTVVLWSAVSTLFSLYVATLGRYATFYG 247
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASM 272
LA++ L +L++L + ++G ELNA +
Sbjct: 248 SLATVAIFLFWLWLLALALLIGGELNARL 276
>gi|291566221|dbj|BAI88493.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 418
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 170 LGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L + LL WN + L + F++ + P+ + ++PG I I W + + LF
Sbjct: 301 LQSTLLDTWNRLQWPITLGIVSTNFAFIYRYGPSYRKPKTPLIPGSILAAIFWALISNLF 360
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y+ Y+ +Y + + + L++L + + ++GA+LNA++ R+K
Sbjct: 361 RWYVYQSEYYNLIYGAIGTFIVLLLWLNISSLVVLMGAQLNATVGDEIRRRK 412
>gi|77463212|ref|YP_352716.1| ribonuclease BN family protein [Rhodobacter sphaeroides 2.4.1]
gi|77387630|gb|ABA78815.1| Ribonuclease BN family protein [Rhodobacter sphaeroides 2.4.1]
Length = 373
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
F +S L A + +++G++AL ++N A+ E RS+ L+SF L A V V M
Sbjct: 166 FVLSFLIAFWSANSGMKALIEAMNIAHEEREKRSFVKLTLLSFALTLGAMVLAVTM---- 221
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
+ + V F ++W R +L + + ++ + P+ + +
Sbjct: 222 IVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLLLLVATAMAGLYRWAPSRNAPEWRWV-- 279
Query: 214 VIFTWIS------WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
TW S W++ ++ FT Y+ F+ YS Y L +++ L+++++ + I+GAE
Sbjct: 280 ---TWGSGIATLVWLIASIAFTIYLENFANYSATYGSLGALVGLLLWVWIAVMILIVGAE 336
Query: 268 LNASM 272
+N+ M
Sbjct: 337 VNSEM 341
>gi|146278656|ref|YP_001168815.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
gi|145556897|gb|ABP71510.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
Length = 278
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+YD ++ D A+ I+ L++FP + + G+ + ID+ P
Sbjct: 17 LYDRVD---SADLNLAAAGIAFYGFLAIFPAVAALIAIWGWASDPSVIRAQIDLAADFLP 73
Query: 72 EVIAKPITDEILQVLAVPAK-----GLFTISALAAAYFSSNGVEALRISLNRAYRVV-EM 125
E ++ +LA ++ LFT A A + + GV AL LN +R+ M
Sbjct: 74 EQAYALFRGQVEALLAANSRHLGWASLFTTGA--AIWSARAGVAALIRGLNATHRLPNRM 131
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYA 184
W+I R I L+ V LV M VA PL L + LG+ ++ +
Sbjct: 132 GPWHIVRAIVLTLTLV-GVGLVAMLLSVVA-PLVLNVI-----PLGDFNQRVLELANVAV 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW------ISWVVGAVLFTHYIVTFSTY 238
ML + G+ V+ P P + TW W + + Y+ F+ Y
Sbjct: 185 GMLVVIFGVALVYRLGPNRPKGS----PKPVVTWGLLTAVTLWALASRALVFYLANFANY 240
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ +Y + +++ LV+LY+ +LGA ++A
Sbjct: 241 NEVYGSIGAVVALLVWLYLSAFAVLLGAAVDA 272
>gi|170017722|ref|YP_001728641.1| hypothetical protein LCK_01373 [Leuconostoc citreum KM20]
gi|169804579|gb|ACA83197.1| Predicted membrane protein [Leuconostoc citreum KM20]
Length = 292
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 17/266 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMAS------HISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
FDIIY V +D + A + ALL++FP I+ L +Q +
Sbjct: 9 FDIIYKRYHLAVLKDLFDRAQIGYVGPTFAYYALLTIFPTIMSVVMLISITNVNQ--KDM 66
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I VV P+ I + + VL+ L + S + S + R+S NR V
Sbjct: 67 IAVVSSILPQNIQAIVLPILRSVLSSTHLTLLSFSVPFTLWTVSQVLAVFRMSFNRIADV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI-PLALAYVRKFFPALGNLLLIIWNGR 181
E S +TR+ SF ++L L+I +F + I LA V ++ P + II +G
Sbjct: 127 EEHISGLLTRVWSFLWLL-----LIIAAFGVLMIGSNILAIVVRYIPG-SQVQNIIISGS 180
Query: 182 IYATMLALFIGLIFVHLFLPA--AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L +F+ L+ ++ FLP ++ I + G I + V FT Y
Sbjct: 181 KWFIWLGMFLLLVMLNYFLPTKMGRAPIKWVALGSFIELIMLNLLNVGFTWYAQVGIKQY 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
Y + SI+ L++L ++G +LG
Sbjct: 241 NFYQSIGSIIVLLIWLNLIGTILVLG 266
>gi|331701997|ref|YP_004398956.1| ribonuclease BN [Lactobacillus buchneri NRRL B-30929]
gi|329129340|gb|AEB73893.1| ribonuclease BN [Lactobacillus buchneri NRRL B-30929]
Length = 299
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 12 IYDAIEHFVE--------EDGWAMASHISLSALLSVFP-FIVFGANLAGFLGAHQFVPTV 62
+Y+A+++F+E D A+ ++ LLS+FP F + G+ L F H + V
Sbjct: 4 LYEAVKNFIEIIIKRYSSGDVSDSAAVLAFYTLLSIFPIFFIVGSILNLF---HIHITEV 60
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +P+ I + I L ++ + + +S + A + S+N+ Y V
Sbjct: 61 EVYLRPLFPDRIYSMLEPIINSTLQSGGASQLSVGLIVTIWSASRAIAAFQRSINKTYGV 120
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII----W 178
++ RLISF ++L+ + LV++ VF + ++ G +L +I W
Sbjct: 121 AADQTAISNRLISFVWMLVLVLALVVLMMVFAFGQMFFQWLTPILNVPGWILNLISTVKW 180
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G I + L L L+F F+P AK K + G + + ++ A FT Y+ FS
Sbjct: 181 PGTIAVSWLLL--SLLF--YFVPTAKVKFRYVWVGALIATLGLMLLAQAFTVYLKFFSQR 236
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y + + + + +L GV + G +NA++
Sbjct: 237 IDAYKTIGTFIVLMFWLDFSGVIMLFGGVVNATI 270
>gi|302556884|ref|ZP_07309226.1| ribonuclease BN [Streptomyces griseoflavus Tu4000]
gi|302474502|gb|EFL37595.1| ribonuclease BN [Streptomyces griseoflavus Tu4000]
Length = 320
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 120/263 (45%), Gaps = 8/263 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG---AHQFVPTVIDVVFGAWP 71
++ F +++ A+ ++ +LS+FP ++ ++ G G + + + D+ G+
Sbjct: 24 SLREFKDDELTDRAAALTYYGVLSLFPALLALVSVLGLTGRSTTDKVLENLQDLAPGSAR 83
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
++I + + LQ A + + L A + +S V A S N Y V E R +
Sbjct: 84 DIITQAVRQ--LQDNAGVGSLMAVVGLLLAVWSASGYVAAFIRSANAVYDVPEGRPVWKV 141
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALF 190
+ FG V +A + L ++S + V LA LG+ L +W+ + +L +
Sbjct: 142 LPVRFG-VTVALLVLAVLSALIVVFTGGLARRAGDALGLGDTALTVWSIAKWPVLVLLVV 200
Query: 191 IGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ P AK + I PG W+V + F Y+ F +Y+ Y +A ++
Sbjct: 201 VMIALLYWAAPNAKVRGFRWITPGSFLALAIWLVASAGFAFYVANFGSYNKTYGTMAGVI 260
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++L++ + +LG E +A +
Sbjct: 261 VFLIWLWITNLAILLGLEFDAEI 283
>gi|284052833|ref|ZP_06383043.1| putative ribonuclease BN [Arthrospira platensis str. Paraca]
Length = 422
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 170 LGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L + LL WN + L + F++ + P+ + ++PG I I W + + LF
Sbjct: 305 LQSTLLDTWNRLQWPITLGIVSTNFAFIYRYGPSYRKPKTPLIPGSILAAIFWALISNLF 364
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y+ Y+ +Y + + + L++L + + ++GA+LNA++ R+K
Sbjct: 365 RWYVYQSEYYNLIYGAIGTFIVLLLWLNISSLVVLMGAQLNATVGDEIRRRK 416
>gi|284041388|ref|YP_003391318.1| ribonuclease BN [Spirosoma linguale DSM 74]
gi|283820681|gb|ADB42519.1| ribonuclease BN [Spirosoma linguale DSM 74]
Length = 347
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 22/279 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
+ +F + ++ D+ F+++ +++ ++ + S+ P +V +LA FLG
Sbjct: 32 KGFFANAWIVLRDSFNGFLDDRCLKLSAALAYYTIFSLAPLLVLVMSLASIFLGEEAIQG 91
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAK-------GLFTISALAAAYFSSNGVEALR 113
+ + G AK I E+++ + + K G+ T+ A + F VE ++
Sbjct: 92 QIFGQINGLVGNDAAKQI-QEMIKNVGLSGKTNTALIIGIGTLLLGATSLF----VE-IQ 145
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVT----LVIMSFVFVAIPLALA-YVRKFFP 168
S+N +RV +LI + + + L+++S V I LAL+ + +F P
Sbjct: 146 DSVNLIWRVKAKPKQGWLKLIKDRLLSSSLIVSLGFLLLVSLVVNGIVLALSDQLTRFMP 205
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
LG ++ N + ++ + G+IF LP AK + G IFT + +++G L
Sbjct: 206 GLGVYIISAINFLVSTAVVTILFGVIFK--VLPDAKIAWKDVRWGAIFTALLFMLGRYLI 263
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
YI T +T S+ Y S++ L ++Y GAE
Sbjct: 264 GLYIDTTAT-SSAYGAAGSLIVLLTWIYYTAAILYFGAE 301
>gi|317506481|ref|ZP_07964282.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974]
gi|316255242|gb|EFV14511.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974]
Length = 345
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 72 EVIAKPITDEILQ--VLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYRVVEMR 126
+ +++ + +E+++ ++AV A G +++L+ + + S+ + A S+ RA+ E+R
Sbjct: 86 QALSQQLVNEVIRPTLMAVTAHGREEVTSLSFVLSLWAGSSAISAFVDSIVRAHNQTELR 145
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPL---ALAYVRKFFPALGNLLLIIWNGRIY 183
R+ + G + +V ++ A+PL V P + +L +Y
Sbjct: 146 HPVRQRIFALG------LYIVFLACAMFALPLLSVTPHEVTTRLPQETHPVLSSAYNDLY 199
Query: 184 ATMLALFIGLI-----FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
ALF+G+ F + LP S ++PG + + ++VG Y+ ++
Sbjct: 200 GP--ALFVGVTLFLSWFYRIALPVPPS-WWRLVPGAVLAVLFFLVGRSGLLWYLNWVTST 256
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA+ + L+ + +G+ ILGAELN S I ++W +
Sbjct: 257 GYTYGALATPIAMLLLAFFIGMSVILGAELN-SAIEHFWPTR 297
>gi|86140856|ref|ZP_01059415.1| hypothetical protein MED217_16930 [Leeuwenhoekiella blandensis
MED217]
gi|85832798|gb|EAQ51247.1| hypothetical protein MED217_16930 [Leeuwenhoekiella blandensis
MED217]
Length = 334
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 96 ISALAAAYFSSNGVE-ALRISLNRAYRVVEMRSWY----ITRLISFGYVLLASVTLVIMS 150
I ++AA + + GV ++ ++N + V E +S + I R I+FG VL+ L++
Sbjct: 104 IISIAALIYGATGVFFQMKKTMNTIWNVTEKKSNFKRMLINRAIAFGMVLVLGFMLLVAF 163
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF--LPAAKSKIM 208
+ V + L Y+ +F P+ + +++ + + LFI +F +F LP K
Sbjct: 164 VITVLLNLLTDYLSQFAPS----ITVVFADALRFLISFLFIASLFAAIFKILPDVKMGYK 219
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ + G T I +++G + +Y + S +++Y G ASI+ L+++ + GAE+
Sbjct: 220 TTVLGASITAILFLIGESILGYYFAS-SNPASVYGGAASIVLILLWVNYTCLILFFGAEI 278
Query: 269 NASMIIYYWRK 279
I K
Sbjct: 279 TVQYAIAKKHK 289
>gi|209523376|ref|ZP_03271931.1| ribonuclease BN [Arthrospira maxima CS-328]
gi|209496118|gb|EDZ96418.1| ribonuclease BN [Arthrospira maxima CS-328]
Length = 387
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 170 LGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L + LL WN + L + ++ + P+ + ++PG I I W + + LF
Sbjct: 269 LQSTLLDTWNRLQWPITLGIVSTNFALIYRYGPSYRKPKTPLIPGSILAAIFWALISNLF 328
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y+ Y+ +Y L + + L++L + + +LGA+LN+++ R+K
Sbjct: 329 RWYVYQSEYYNVLYGALGTFIVLLLWLNISSLVVLLGAQLNSTVGDEIRRRK 380
>gi|149175144|ref|ZP_01853767.1| hypothetical protein PM8797T_25731 [Planctomyces maris DSM 8797]
gi|148846122|gb|EDL60462.1| hypothetical protein PM8797T_25731 [Planctomyces maris DSM 8797]
Length = 301
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
PG +F ISWV+ F Y+ F+ Y+ Y + + LV+LY+ G + G E+N
Sbjct: 229 PGSMFVIISWVLMLQGFRLYVENFAHYNETYGTIGGFIVLLVWLYLTGAILMTGGEING 287
>gi|120555963|ref|YP_960314.1| putative ribonuclease BN [Marinobacter aquaeolei VT8]
gi|120325812|gb|ABM20127.1| tRNA-processing RNAse BN [Marinobacter aquaeolei VT8]
Length = 451
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 109 VEALRISLNRAYRVVEMRSW------YITRLISFGYVLLASVTLVIMSFVFVAIPLALAY 162
V+ + S N +RV EMRS Y++ +I G +L+ S V + I L
Sbjct: 136 VQKIERSFNMIWRVPEMRSMAQRFSNYLS-VIMVGPLLMVSAIGVTATIFSSEIAQNLMA 194
Query: 163 VRKFFPALGNLLLIIWNGRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+ F G+L I+ R T L +G FV++F+P + K+ + +SW
Sbjct: 195 IEPF----GSL--IVLASRF--TPFFLVVGAFTFVYIFIPNTRVKLRYAFIAGLVAGVSW 246
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
G +LF ++ + Y+ +Y+G A + L++ Y+ + +LGA L
Sbjct: 247 QAGGMLFASFVAGSAKYAAIYSGFAVGIILLIWTYLNWMILLLGASL 293
>gi|119961246|ref|YP_949390.1| YihY family protein [Arthrobacter aurescens TC1]
gi|119948105|gb|ABM07016.1| YihY family protein [Arthrobacter aurescens TC1]
Length = 359
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRI 114
QF P G + + +PI +E+ Q A G I + A +S++G A
Sbjct: 97 QQFAP-------GPGVDAMRQPI-EELTQSNAA---GFALILGILVALWSASGYTTAFSR 145
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV-AIPLALAYVRKFFPALGNL 173
++NR Y V E R + R +++ V +++ + V + P+A A +
Sbjct: 146 AMNRVYEVDEGRGFVKLRGTMLAVTVVSVVGAALVAGMLVLSGPVAEAVGGAI--GMSET 203
Query: 174 LLIIWN-GRIYATMLALFIGLIFVHLFLPAAKS---KIMSILPGVIFTWISWVVGAVLFT 229
L +WN + ++ + + ++ F P K + MS+ G + + + + ++ F
Sbjct: 204 FLTVWNIAKWPILIIIVVAIIAVLYYFTPNVKQPKFRWMSM--GSLIALVIFALASLGFG 261
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ FS Y+ Y LA ++ L++L++L + + GAE +A M
Sbjct: 262 FYVANFSNYNKTYGALAGVIIMLLWLWILNMSLLFGAEFDAEM 304
>gi|325922977|ref|ZP_08184686.1| tRNA-processing RNAse BN [Xanthomonas gardneri ATCC 19865]
gi|325546536|gb|EGD17681.1| tRNA-processing RNAse BN [Xanthomonas gardneri ATCC 19865]
Length = 425
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M F+ ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 190 APMAVEFVCIVLIYRVVPQHGVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 250 ALSALPILLLWIYLSWVSVLLGASLASSMAAFRYQPE 286
>gi|83644372|ref|YP_432807.1| ribonuclease BN-like family protein [Hahella chejuensis KCTC 2396]
gi|83632415|gb|ABC28382.1| ribonuclease BN-like family protein [Hahella chejuensis KCTC 2396]
Length = 455
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 18/267 (6%)
Query: 29 SHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
H++L A LLS+ P + ++ G H + +++ VF A+ E + + +
Sbjct: 50 GHVTLHAMGLVYTTLLSIVPLLALSFSVLKGFGVHNQLEPLLENVFQAFGEKGPELVQNV 109
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
+ V V L ++ Y + V+ + S N +RV ++RS R S+ V++
Sbjct: 110 LAFVDNVKVGVLGSVGLGLLIYTVISLVQKVERSFNEIWRVSQIRS-LAQRFSSYLSVIV 168
Query: 142 ASVTLV--IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
L M + +A G L + Y ++ALF F++ F
Sbjct: 169 VGPLLAFSAMGATATLVGTDMAQTVLSIEPFGRLFSLATRMAPYVIIVALFT---FMYRF 225
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
+P K + G + I+W +F ++V S Y +Y+G A + L++LY+
Sbjct: 226 IPNTKVRTRYAFIGGLGAGIAWQTTGYVFAKFVVGTSNYEAIYSGFAVGILVLIWLYISW 285
Query: 260 VFFILGAEL-----NASMIIYYWRKKP 281
+ ++GA + ++ I R +P
Sbjct: 286 LILLMGASVAFYGQHSHQITRQRRVRP 312
>gi|209546746|ref|YP_002278664.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209537990|gb|ACI57924.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 359
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 119/252 (47%), Gaps = 12/252 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ LL++FP + +L G + + + + G P + D+I +++
Sbjct: 82 IAAGVTFYLLLALFPAMAALVSLYGLVADPVTISEHLRELAGLLPPGAFDLLADQIKELV 141
Query: 87 AVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ L F + A + + +G A+ ++N AY E R L+ + L A
Sbjct: 142 SKRESALGITFFVGLGIALWSTHSGTLAIFDAMNVAYEENEKRGLIRLNLVGLCFTLSAM 201
Query: 144 VTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
+ V+M + +P+ L+Y+ +F + LL +L + + + V+ F P
Sbjct: 202 LLTVVMVALVGVMPVVLSYLWLDQFKEHMALLLRWP------LLLLVVAVAVTSVYRFGP 255
Query: 202 AAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ + +K+ + G T ++W ++ F+ Y+ F+ Y+ Y L +++ L+++++ V
Sbjct: 256 SREPAKLRWMTWGAALTTVAWAAMSLGFSFYLDHFANYNATYGTLGALIGFLIWIWLSVV 315
Query: 261 FFILGAELNASM 272
++GAELNA +
Sbjct: 316 ILVIGAELNAEL 327
>gi|259047107|ref|ZP_05737508.1| ribonuclease [Granulicatella adiacens ATCC 49175]
gi|259036157|gb|EEW37412.1| ribonuclease [Granulicatella adiacens ATCC 49175]
Length = 306
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 25/254 (9%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS+ P I+ AN+ L P +DV+F + I + ++ +L G F
Sbjct: 48 LLSIIPIIMLIANIIPLL------PIPVDVIFKTMRTIFPADINEVLIPILR-NYLGNFN 100
Query: 96 ISALAAAYF-----SSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
AL+ +S +L+ +LN Y R++ R + + A + + +S
Sbjct: 101 GGALSVGLLILFWPASQMFSSLQRALNVLYGAPVRRNFIFERFFAIVIAMAAILMIFAVS 160
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWN------GRIYATMLALFIGLIFVHLFLPAAK 204
+F+ L + +FF NL II + G ++ T +F+ L F++ +P K
Sbjct: 161 VLFIFGEQFLRLIGEFFSL--NLSTIILDFSFIKWGMLFIT---VFLLLSFMYFAIPNVK 215
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ LPG F I +V+ + LF+ YI T +++ +++LY + IL
Sbjct: 216 WSFLYALPGGFFATIGFVLISQLFSIYIHYAGRNLTANGAFGTLIVFMIWLYFIANVMIL 275
Query: 265 GAELNASMIIYYWR 278
G LN +IIY +R
Sbjct: 276 GGVLN--VIIYRFR 287
>gi|154496145|ref|ZP_02034841.1| hypothetical protein BACCAP_00429 [Bacteroides capillosus ATCC
29799]
gi|150274700|gb|EDN01764.1| hypothetical protein BACCAP_00429 [Bacteroides capillosus ATCC
29799]
Length = 295
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P K + +L G I + V ++LF+ +I S YS +Y L S++ L++LY+ G
Sbjct: 202 PRGKPR-PPLLTGAILASAALVASSILFSWFIGLSSRYSLVYGSLTSVVILLLWLYLCGN 260
Query: 261 FFILGAELNASMIIYYWRKK 280
ILG N ++Y RKK
Sbjct: 261 ILILGNVFNC---VWYRRKK 277
>gi|86608508|ref|YP_477270.1| YihY family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557050|gb|ABD02007.1| YihY family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 324
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAG-FLG-AHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+AS ++ S++L++FPFI+ G F+G + Q +++ + P+ + +
Sbjct: 48 GLASEMAYSSMLALFPFILTLLTGVGLFVGSSEQAFERLMEQLSQIAPQEALTLLDRYVR 107
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE--MRSWYITRLISFGYVL- 140
++ +GL ++ L + +S + A+ +L+ ++ + + R ++ +LIS ++L
Sbjct: 108 ELRFGQNRGLLSLGFLGTLWAASGAMGAVMTALDLSHEIPQDRRRPFWRRKLISLVWMLA 167
Query: 141 -LASVTLVIMSFVFVAIPLALAYVRKFFPA-----------LGNLLLIIWNGRIYATMLA 188
L L + F+F A L Y + F A L L L +W + L
Sbjct: 168 TLGLTGLASLIFLFSASFLRFLYRKAGFLAQEVGGPTQLDPLRELGLNLWGILTWPISLG 227
Query: 189 LFIGLIFV-HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + +V + F P+ + + I PG I + WV + Y+ F ++ +Y + +
Sbjct: 228 LVVFSCWVLYRFGPSLRRPQIPIWPGAIVASLLWVGVSWGLRIYVEHFGQFNQVYGAVGA 287
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
++ L+++++ + + G ++N ++
Sbjct: 288 VIVLLLWVWLTSLALLFGDQINIAL 312
>gi|302381611|ref|YP_003817434.1| ribonuclease BN [Brevundimonas subvibrioides ATCC 15264]
gi|302192239|gb|ADK99810.1| ribonuclease BN [Brevundimonas subvibrioides ATCC 15264]
Length = 406
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 126/271 (46%), Gaps = 18/271 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + + + +A ++ LLS+FP + + G I ++
Sbjct: 86 DIVWRVVNGYFNDQVGFVAGGVTFLMLLSLFPTLAAFVTVYGLFADPADASARIQFLYSF 145
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTIS---ALAAA-YFSSNGVEALRISLNRAYRVVEM 125
P +A + E+ + LA + G T + LA + + ++NGV+ L +N AY VE
Sbjct: 146 LPANVAGFLAQELTR-LAAGSTGSLTFTLIWTLALSLWTANNGVKTLFHGINVAYHEVEK 204
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIP--LALAYVRKFFPALGNLLLIIWNGRIY 183
R + L+ F + L +++ + + V +P L L + + L L +
Sbjct: 205 RDFVQYNLLCFAFTLSGLAAVLLSAALVVGVPIFLGLFGLADDWERLAPLR--------W 256
Query: 184 ATMLALFI-GLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ A+++ L+ ++ F P+ +++I ++PG +F V + F+ Y+ TF +
Sbjct: 257 PMLFAIYVLTLVTMYRFGPSRTRARIRWLVPGALFAASVSVFISFAFSWYLTTFVRMDS- 315
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y LA+ M L+++++ ++GA+LNA +
Sbjct: 316 YGPLATAMGFLLWVWLSVQVVLMGAKLNAEI 346
>gi|328461932|gb|EGF34140.1| hypothetical protein AAULH_03626 [Lactobacillus helveticus MTCC
5463]
Length = 282
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMR-- 126
P+ ++ I I +L + G + + A + SN V A+R+ NR Y V VE++
Sbjct: 73 PDQVSSFIMPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKLS 132
Query: 127 --SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-------I 177
++ TRLI ++ TL+I+ +F A+ + LA+ ++ + + I I
Sbjct: 133 MLNFLWTRLI-----MVIFTTLMII--IFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKI 185
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ R L + + + +++ LP K K I PGV T W+ + LF+ Y+ F
Sbjct: 186 FSYRYPVIFLIIILAVFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNF 243
>gi|188992885|ref|YP_001904895.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. campestris str. B100]
gi|226737462|sp|B0RUB3|Y3490_XANCB RecName: Full=UPF0761 membrane protein xcc-b100_3490
gi|167734645|emb|CAP52855.1| Ribonuclease BN,probable [Xanthomonas campestris pv. campestris]
Length = 425
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M F+ ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 190 APMAVEFVCIVLIYRVVPQHAVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 250 ALSALPILLLWIYLSWVSVLLGASLASSMSAFRYQPE 286
>gi|89054703|ref|YP_510154.1| ribonuclease BN, putative [Jannaschia sp. CCS1]
gi|88864252|gb|ABD55129.1| ribonuclease BN putative [Jannaschia sp. CCS1]
Length = 307
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 14/245 (5%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL- 93
LL++FP I + G + + +FG P+ + ITD+ + G
Sbjct: 37 GLLALFPNITALIAVNGLPVEPSAIVDQLRSLFGVVPQELIAIITDQATAIAGSREDGFG 96
Query: 94 --FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
L A Y +S G+ +L +N AY E R + +L +F + + LVI
Sbjct: 97 LAVVTGVLVALYSASKGMSSLMEGINIAYDEHEKRGFIRLKLATFAQTIFLILGLVITLL 156
Query: 152 VFVAIPLALAYVRKFFPALGNLLL-IIWNGRIYATMLALFIGLIFVHLFLPAAKS---KI 207
+ P AL LG ++ +I G A + +GL ++ + P+ K
Sbjct: 157 AMLGRPAALGIAD-----LGGVVEPLISIGLFLALPVLTMLGLSVLYPYAPSRDEPEWKW 211
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
S+ G I + + + F Y+ F +Y+ LA + L + ++ + GAE
Sbjct: 212 ASL--GRIERCLLRLAASAGFPFYVSNFGSYNDGIGALAGDIVVLTWFWISAFIILKGAE 269
Query: 268 LNASM 272
LNA +
Sbjct: 270 LNAEL 274
>gi|21230334|ref|NP_636251.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769672|ref|YP_244434.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. campestris str. 8004]
gi|32699642|sp|Q8PC75|Y860_XANCP RecName: Full=UPF0761 membrane protein XCC0860
gi|81175005|sp|Q4URA9|Y3370_XANC8 RecName: Full=UPF0761 membrane protein XC_3370
gi|21111886|gb|AAM40175.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66575004|gb|AAY50414.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. 8004]
Length = 425
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M F+ ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 190 APMAVEFVCIVLIYRVVPQHAVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 250 ALSALPILLLWIYLSWVSVLLGASLASSMSAFRYQPE 286
>gi|326571351|gb|EGE21368.1| putative ribonuclease BN [Moraxella catarrhalis BC8]
Length = 500
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 124/280 (44%), Gaps = 32/280 (11%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFI----VFGANLAGFLGAHQFVPTVIDV-VFGAW 70
+ HF+++D A+ ++ + LL++ P + V +++ G + V I +F
Sbjct: 23 VRHFIDDDTQQKAASLTYTTLLALVPILTVVLVIFSSVPALEGLREQVQQTISANLFPTA 82
Query: 71 PEVIA---KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
E +A + ++ + V GLF + + + + + N+ +RV E RS
Sbjct: 83 SEQVAGYIRSFAEKSSNLGLVGVAGLFVTAIMT--------LNTIEYAFNKIWRVQE-RS 133
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+I + ++ ++ ++F + ++ ++ + G I W Y L
Sbjct: 134 GGAASIIRYWTIITLGPVILGVAFGASSAIQSMDFLNRQIAGYG----IDWGIWAYLVSL 189
Query: 188 ALFI-GLIFVHLFLPAAK-----SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
AL G I ++ F+P A+ + I I+ ++F I V G V+ F++Y +
Sbjct: 190 ALMTCGFILLYWFIPKAQVPIKNAAIAGIVTAILFESIKQVFGTVM-----TNFTSYEAI 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y A++ L++LY+ +LG +++ ++ I+ ++ P
Sbjct: 245 YGAFAALPIFLLWLYISWNLILLGVQISYTLTIFDTKEVP 284
>gi|85375451|ref|YP_459513.1| hypothetical protein ELI_13120 [Erythrobacter litoralis HTCC2594]
gi|84788534|gb|ABC64716.1| hypothetical protein ELI_13120 [Erythrobacter litoralis HTCC2594]
Length = 245
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 31/210 (14%)
Query: 71 PEVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVEMRS 127
P A+ I ++ V+ P +KG + ALA + F + +G AL L+ AY E R
Sbjct: 48 PASAAELIGSQLEGVVEGPDSSKGFGLLLALAISLFGARSGATALMAGLDIAYDTTETRG 107
Query: 128 W----YITRLISFGYVL---LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + LI+ G VL + ++ L + + A+ LA +Y+ F
Sbjct: 108 FVEKNALALLITGGAVLGLGIVALALTVAGLIGDALGLAASYLVLFSSGA---------- 157
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+G + ++ P + + PG + W++ LF Y+ F Y+
Sbjct: 158 ----------LGAVLLYRHAPDRPTATWNRTWPGAVVFAALWLLATSLFGFYVANFGNYN 207
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELN 269
Y L ++M L +LY+ +LGAELN
Sbjct: 208 ATYGSLGAVMVLLTWLYLSAYLLLLGAELN 237
>gi|296113710|ref|YP_003627648.1| putative ribonuclease BN [Moraxella catarrhalis RH4]
gi|295921404|gb|ADG61755.1| putative ribonuclease BN [Moraxella catarrhalis RH4]
gi|326562819|gb|EGE13114.1| putative ribonuclease BN [Moraxella catarrhalis 46P47B1]
gi|326563460|gb|EGE13723.1| putative ribonuclease BN [Moraxella catarrhalis 103P14B1]
gi|326570644|gb|EGE20680.1| putative ribonuclease BN [Moraxella catarrhalis BC7]
gi|326572954|gb|EGE22933.1| putative ribonuclease BN [Moraxella catarrhalis CO72]
gi|326573770|gb|EGE23727.1| putative ribonuclease BN [Moraxella catarrhalis 101P30B1]
gi|326574808|gb|EGE24742.1| putative ribonuclease BN [Moraxella catarrhalis O35E]
Length = 500
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 124/280 (44%), Gaps = 32/280 (11%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFI----VFGANLAGFLGAHQFVPTVIDV-VFGAW 70
+ HF+++D A+ ++ + LL++ P + V +++ G + V I +F
Sbjct: 23 VRHFIDDDTQQKAASLTYTTLLALVPILTVVLVIFSSVPALEGLREQVQQTISANLFPTA 82
Query: 71 PEVIA---KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
E +A + ++ + V GLF + + + + + N+ +RV E RS
Sbjct: 83 SEQVAGYIRSFAEKSSNLGLVGVAGLFVTAIMT--------LNTIEYAFNKIWRVQE-RS 133
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+I + ++ ++ ++F + ++ ++ + G I W Y L
Sbjct: 134 GGAASIIRYWTIITLGPVILGVAFGASSAIQSMDFLNRQIAGYG----IDWGIWAYLVSL 189
Query: 188 ALFI-GLIFVHLFLPAAK-----SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
AL G I ++ F+P A+ + I I+ ++F I V G V+ F++Y +
Sbjct: 190 ALMTCGFILLYWFIPKAQVPIKNAAIAGIVTAILFESIKQVFGTVM-----TNFTSYEAI 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y A++ L++LY+ +LG +++ ++ I+ ++ P
Sbjct: 245 YGAFAALPIFLLWLYISWNLILLGVQISYTLTIFDTKEVP 284
>gi|50953981|ref|YP_061269.1| membrane protein [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50950463|gb|AAT88164.1| membrane protein [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 348
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 30/278 (10%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------------AHQF 58
I+ + F + +A+ ++ +L++FP ++ ++ G +G A Q
Sbjct: 20 ILKRTLRSFGRDACTDLAAGLTYFGVLALFPALIALVSVLGLVGQSKTGIDALFGMADQL 79
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLN 117
P ++DV G PI E L PA G + + A +S++G V +LN
Sbjct: 80 APGMLDVAHG--------PI--EALST--SPATGWGLVIGIVGALWSASGYVGGFGRALN 127
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV-AIPLALAYVRKFFPALGNLLLI 176
R Y V E RS ++ R + G + A + I++ V V + P+A LG+
Sbjct: 128 RVYGVEEGRSAFVLRPVQLGVTVAAVALVAIVAVVLVVSGPIARTIGGAI--GLGDAAQT 185
Query: 177 IWN-GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV-VGAVLFTHYIVT 234
W R A +AL + + ++ P K L FT I + V +VLF Y+
Sbjct: 186 AWEILRWPAVAVALVVLVALLYSATPNVKRPGFRWLTAGSFTAIVLLGVASVLFAFYVAN 245
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y Y LA ++ L+++++ V +LGAEL++ +
Sbjct: 246 VGSYDKTYGALAGVIVFLLWIWIANVALLLGAELDSEI 283
>gi|84496269|ref|ZP_00995123.1| putative integral membrane protein [Janibacter sp. HTCC2649]
gi|84383037|gb|EAP98918.1| putative integral membrane protein [Janibacter sp. HTCC2649]
Length = 381
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 28/262 (10%)
Query: 26 AMASHISLSALLSVFPFIV--FGANLAGFLG---AHQFVPTVIDVVFGAWPEVIAKPITD 80
+AS ALLS+ P ++ FG G++G V TV + + E A+ +TD
Sbjct: 39 GLASEAGFFALLSLPPLVLGLFGG--VGYIGRWLGQDTVATVREAIT----EYAARFLTD 92
Query: 81 EILQVLAVPA------KGLFTISALA---AAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+++ P G F + ++ + + S + L +++ Y +R T
Sbjct: 93 DVISSTLAPTVDDVFTAGRFDLISVGFVLSLWSGSRALNVLVDTVSIMYGQSGVRGIVPT 152
Query: 132 RLISFG-YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R++SF Y++ V ++ + V + P L V P + L ++ + ++A F
Sbjct: 153 RVLSFSLYIVALVVGIITIPLVLIG-PTLLGEV---LPDTWDFLTFLYWPVVSLVVIAAF 208
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L V L +S +PG + T + WVV + I +++Y L++ +
Sbjct: 209 TSLYHVSTPL---RSPWTRDIPGAVLTLLIWVVASFAVRGSIAASLGGTSIYGPLSAPIV 265
Query: 251 CLVFLYMLGVFFILGAELNASM 272
L++LYML + ++GA LNA +
Sbjct: 266 LLIWLYMLAIAVLIGAALNAGI 287
>gi|326562450|gb|EGE12769.1| putative ribonuclease BN [Moraxella catarrhalis 7169]
gi|326563224|gb|EGE13492.1| putative ribonuclease BN [Moraxella catarrhalis 12P80B1]
gi|326569158|gb|EGE19220.1| putative ribonuclease BN [Moraxella catarrhalis BC1]
Length = 500
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 124/280 (44%), Gaps = 32/280 (11%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFI----VFGANLAGFLGAHQFVPTVIDV-VFGAW 70
+ HF+++D A+ ++ + LL++ P + V +++ G + V I +F
Sbjct: 23 VRHFIDDDTQQKAASLTYTTLLALVPILTVVLVIFSSVPALEGLREQVQQTISANLFPTA 82
Query: 71 PEVIA---KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
E +A + ++ + V GLF + + + + + N+ +RV E RS
Sbjct: 83 SEQVAGYIRSFAEKSSNLGLVGVAGLFVTAIMT--------LNTIEYAFNKIWRVQE-RS 133
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+I + ++ ++ ++F + ++ ++ + G I W Y L
Sbjct: 134 GGAASIIRYWTIITLGPVILGVAFGASSAIQSMDFLNRQIAGYG----IDWGIWAYLVSL 189
Query: 188 ALFI-GLIFVHLFLPAAK-----SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
AL G I ++ F+P A+ + I I+ ++F I V G V+ F++Y +
Sbjct: 190 ALMTCGFILLYWFIPKAQVPIKNAAIAGIVTAILFESIKQVFGTVM-----TNFTSYEAI 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y A++ L++LY+ +LG +++ ++ I+ ++ P
Sbjct: 245 YGAFAALPIFLLWLYISWNLILLGVQISYTLTIFDTKEVP 284
>gi|289424063|ref|ZP_06425849.1| putative membrane-associated ribonuclease [Peptostreptococcus
anaerobius 653-L]
gi|289155488|gb|EFD04167.1| putative membrane-associated ribonuclease [Peptostreptococcus
anaerobius 653-L]
Length = 282
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 128/286 (44%), Gaps = 30/286 (10%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I I+ F D ++ A+ +S +S+FP ++F + A +VP V +VV +
Sbjct: 6 NCIRALIQKFDIGDSYSRAAEMSFYLTMSIFPSLIF------VICALAYVPEV-NVVTTS 58
Query: 70 WPEVIAKPITDE--------ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
P I I E I + ++ L +SA A + S V ++ ++ N Y
Sbjct: 59 EP--IKNIIPAEAHTIVVYFIKSAVTHKSQKLLIVSAGLAVWTFSKAVNSILVAQNAYYG 116
Query: 122 VVEMRSWYITRLIS-------FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ ++ I +L S F ++L V LV S + I L V LG +
Sbjct: 117 FEDKKNPIIAKLTSLIFAALFFIEIILCIVFLVYGSKISEFIIGLLGNVEGSNMVLGIIF 176
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I+ M+ +F+G ++ F P+ K LPG + T + W++ ++L++ Y
Sbjct: 177 TIVRYLVPILVMIVIFLG---IYSFGPSKKIPYKYCLPGAVVTSLLWLLFSMLYSVYANN 233
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
F +Y +++++ + +LY + +G ++NA +IY+ + +
Sbjct: 234 FFN-GEIYGSISTMIVLMTWLYFCSLSVSVGYKVNA--LIYFSKNE 276
>gi|89890230|ref|ZP_01201740.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
gi|89517145|gb|EAS19802.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
Length = 333
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 128/266 (48%), Gaps = 14/266 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+++++ + + ++D W +++ ++ +L++ +V N+ G + + + +
Sbjct: 19 LLWESAKKWNDDDVWQLSASVAYYTILALPGLLVIMINIVGAVWDTEIATGRLTSSLTSL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGV-EALRISLNRAYR--VVEMR 126
+ + ILQ + + F I ++ F++ GV L++SLN+ ++ +
Sbjct: 79 IGYDSAESINGILQAASKDTESWFAKIIGVSTLVFAATGVFYQLQLSLNKIWKLKINPKT 138
Query: 127 SWY---ITRLISFGYVLLASVTLVIMSFVFVAI-PLALAYVRKFFPA-LGNLLLIIWNGR 181
W+ R+ SFG++L+ L+++SF+ AI + +++ A LG L L++ N
Sbjct: 139 PWWKIITDRVKSFGFILVLGF-LILISFILSAIIGILQDWIQVHIAAYLGKLALLV-NYI 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++++ GL+F +LP A+ K + PG + T I + G L Y T S+ ++
Sbjct: 197 VSLSIISFLFGLMF--RYLPDARLKWKMVWPGALLTGILFETGKFLLEIYF-TQSSPASA 253
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAE 267
Y I+ L+++ + GAE
Sbjct: 254 YGAAGLIVLLLLWVSYSSLILFYGAE 279
>gi|300362065|ref|ZP_07058242.1| ribonuclease BN [Lactobacillus gasseri JV-V03]
gi|300354684|gb|EFJ70555.1| ribonuclease BN [Lactobacillus gasseri JV-V03]
Length = 307
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 12/244 (4%)
Query: 36 LLSVFPFIVFGAN-LAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
LLS+FP I+ N L F + + ++++F + + PI + +L+ + G
Sbjct: 40 LLSIFPIIIIIGNVLPLFSIDTKPIARYLELIFPSQVSSLIMPIVNALLKK---HSSGFI 96
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEM---RSWYITRLISFGYVLLASVTLVIMSF 151
++ + A + S V ++R+ N+ Y V + +SW+ L++ + SV LV+
Sbjct: 97 SLGIVVAIWSLSCLVNSIRLGANKIYGVDKQEKGKSWW-NYLLARTFTFALSVILVVGFS 155
Query: 152 VFVAIPLALAYVRKFFPALGNLLL----IIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
+ + I + +F + NL L + N R +L I ++++ +P + +
Sbjct: 156 IIIFIFTFGRQIMEFLAPIFNLSLWWVYKLENYRWPIIILMTVIVNLYINYVIPNIRVQK 215
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ PGV FT ISW + F Y+ F T Y + S + +++L + +LG
Sbjct: 216 RVVWPGVWFTVISWSALSYFFGLYLRQFGTRWQNYGIVGSFIIFMLWLNVGSFLLLLGIC 275
Query: 268 LNAS 271
+NA+
Sbjct: 276 INAA 279
>gi|330466829|ref|YP_004404572.1| ribonuclease bn [Verrucosispora maris AB-18-032]
gi|328809800|gb|AEB43972.1| ribonuclease bn [Verrucosispora maris AB-18-032]
Length = 326
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 90 AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
A+ L + A + +SN + + + N Y V+E R + R + G LA+++LV++
Sbjct: 117 ARVLLSFGLFGALWSASNFIASFTRASNAIYGVIEGRPMWRLRPMQIG---LAALSLVLI 173
Query: 150 SFV----FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA-- 203
+ V V+ P+A A V A G W + LA+ L+ LF A
Sbjct: 174 ATVAAGLIVSGPVADA-VGDLIGA-GGAARTAWAVAKWPA-LAMIAMLLLSLLFWVAPNV 230
Query: 204 -KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ + + PG + ++W++ + F Y+ F +Y Y L +++ LV+L++
Sbjct: 231 RQPRFRWLTPGGVVALLAWMISSFGFGLYVANFGSYDATYGSLGAVIAFLVWLFLSNSAL 290
Query: 263 ILGAELNASM 272
+LG ++NA +
Sbjct: 291 MLGVQINAEL 300
>gi|312195054|ref|YP_004015115.1| ribonuclease BN [Frankia sp. EuI1c]
gi|311226390|gb|ADP79245.1| ribonuclease BN [Frankia sp. EuI1c]
Length = 452
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
H LP + LPG +F + W+VG+ + Y+ +Y LA+ L+F Y
Sbjct: 327 HQALPQ-RRPWRRALPGAVFALVGWLVGSYVLRLYLERVFGNELVYGSLAAPAAALLFFY 385
Query: 257 MLGVFFILGAELNASM 272
+ G+ +LGAELNA++
Sbjct: 386 ITGLAVLLGAELNAAL 401
>gi|289663480|ref|ZP_06485061.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. vasculorum NCPPB702]
Length = 425
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M F+ ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 190 APMAVEFVCIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 250 ALSALPILLLWIYLSWVSVLLGASLASSMAAFRYQPE 286
>gi|89056049|ref|YP_511500.1| ribonuclease BN, putative [Jannaschia sp. CCS1]
gi|88865598|gb|ABD56475.1| ribonuclease BN putative [Jannaschia sp. CCS1]
Length = 325
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 9/175 (5%)
Query: 101 AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL 160
A Y SS G+ L LN AY E R + +L + A + ++ +PLA
Sbjct: 122 AIYSSSRGMANLVSGLNVAYEEEEERGFLALQLRITALTVFALIVGLLSLGALAVLPLAT 181
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF--VHLFLPAAK-SKIMSILPGVIFT 217
+ + L++ W +L F + F ++ F P+ + +K I PG +
Sbjct: 182 ELIFRSELLTQVALILRW------PLLLGFASVAFTIIYRFGPSRRQAKWRWIAPGGVLA 235
Query: 218 WISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ WV F Y+ F Y+ + LA ++ L++L++ +LGA L+A M
Sbjct: 236 VLIWVTATFGFAWYVQAFGAYNETFGTLAGVIVLLMWLWLSAFSILLGATLDAEM 290
>gi|258510959|ref|YP_003184393.1| ribonuclease BN [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477685|gb|ACV58004.1| ribonuclease BN [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 285
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 121/261 (46%), Gaps = 27/261 (10%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA----WPEVI-AK 76
D ++A+ I+ A+ S+ P ++ A + H+ + +++V GA +P++ A
Sbjct: 22 HDITSLAAQIAFYAMFSLLPLLILVMYGASLVVPHRII---VEMVLGALRPYYPDLQNAN 78
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS- 135
+ + L L+ +S ++ A+ +++ + A++ +L+R + V RS+ R I+
Sbjct: 79 QMLENSLNKLSDIGARAGLVSFISLAWSATSALIAVQQALDRIFEVGVPRSFLARRAIAA 138
Query: 136 ---FGYVLLASVTLVIMSF---VFVAIPLALAYVRKF--FPALGNLLLIIWNGRIYATML 187
V+LA V+ + M+ V IP +V F F + +L L
Sbjct: 139 LFLVALVILAVVSALAMALYPWVVHHIPAGTWFVTAFTRFSGVTRMLY----------PL 188
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+LF+ V+ +LP+ + + + G + + + +LF Y TY +Y GL
Sbjct: 189 SLFVTCFVVYRYLPSRRVNLNCTILGALAATVLLDLARLLFVVYAAHAVTYHAVYGGLTV 248
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
++ + ++Y+ + +LGAE+
Sbjct: 249 VILLIFWMYIALIILLLGAEI 269
>gi|289670867|ref|ZP_06491942.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 416
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M F+ ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 190 APMAVEFVCIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 250 ALSALPILLLWIYLSWVSVLLGASLASSMAAFRYQPE 286
>gi|166710796|ref|ZP_02242003.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas oryzae
pv. oryzicola BLS256]
Length = 425
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M F+ ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 190 APMAVEFVCIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 250 ALSALPILLLWIYLSWVSVLLGASLASSMAAFRYQPE 286
>gi|241113097|ref|YP_002972932.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240861305|gb|ACS58971.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 359
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 196 VHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
V+ F P+ + +K+ + G + T I+W ++ F+ Y+ F+ Y+ Y L +++ L++
Sbjct: 250 VYRFGPSREPAKLRWMTWGAVLTTIAWAAMSLGFSFYLDHFANYNATYGTLGALIGFLIW 309
Query: 255 LYMLGVFFILGAELNASM 272
+++ V I+G ELNA +
Sbjct: 310 IWLSVVILIVGGELNAEL 327
>gi|170747781|ref|YP_001754041.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170654303|gb|ACB23358.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 406
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 36/63 (57%)
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ PG + W+V ++LF+ Y+ F +Y+ Y L + + + ++++ + + GA++N
Sbjct: 312 VTPGGALAALLWIVASLLFSWYVAHFGSYNKTYGSLGAAIGFMTWIWLSTMIVLTGAQVN 371
Query: 270 ASM 272
A M
Sbjct: 372 AEM 374
>gi|58583238|ref|YP_202254.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|84625074|ref|YP_452446.1| fused ribonuclease BN/uncharacterized domain-containing protein
[Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188575458|ref|YP_001912387.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|67460605|sp|Q5GWQ2|Y3615_XANOR RecName: Full=UPF0761 membrane protein XOO3615
gi|123521141|sp|Q2NZV5|Y3417_XANOM RecName: Full=UPF0761 membrane protein XOO3417
gi|226737463|sp|B2SQM8|Y4555_XANOP RecName: Full=UPF0761 membrane protein PXO_04555
gi|58427832|gb|AAW76869.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84369014|dbj|BAE70172.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188519910|gb|ACD57855.1| tRNA-processing ribonuclease BN [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 425
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M FI ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 190 APMAVEFICIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGVYLGNFQTYQRIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 250 ALSALPILLLWIYLSWVSVLLGASLASSMAAFRYQPE 286
>gi|300710106|ref|YP_003735920.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299123789|gb|ADJ14128.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 442
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 46/260 (17%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG----AWPEVIAKPITDEI 82
+A+ I+ A +S+ P ++F +G +F ++D A E I IT E
Sbjct: 23 LAASIAYYAFVSLIPLLLFTFAAVSAVGGQEFANQILDRTSAFLAPAGQEAIEGAITGET 82
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRI--SLNRAYRVV-------EMRSWYITRL 133
+G TI+ +S AL++ L+ A+ ++ + L
Sbjct: 83 -------GRGGATIAGSVVLLWS-----ALKLFRGLDTAFSIIYDSGLDKSIVGQIANAL 130
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLA--LAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
I F +LLA V ++++ VF +P + YV F ++AL +
Sbjct: 131 IVFLSILLAIVGMLVLGTVFALVPTIPFIGYVTPLF-----------------ALIALSV 173
Query: 192 GLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ F+P + + +PG + + W + +F Y Y Y + I+
Sbjct: 174 VFLPMYYFMPDVEGLTVRDAIPGAVLAGVGWALLQSVFGIYASNAGQYEA-YGVIGGILL 232
Query: 251 CLVFLYMLGVFFILGAELNA 270
L +LY+ GV ILGA LN+
Sbjct: 233 LLTWLYIGGVLIILGAVLNS 252
>gi|78046524|ref|YP_362699.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325929450|ref|ZP_08190578.1| tRNA-processing RNAse BN [Xanthomonas perforans 91-118]
gi|123730411|sp|Q3BX14|Y968_XANC5 RecName: Full=UPF0761 membrane protein XCV0968
gi|78034954|emb|CAJ22599.1| ribonuclease BN [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|325540225|gb|EGD11839.1| tRNA-processing RNAse BN [Xanthomonas perforans 91-118]
Length = 425
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M F+ ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 190 APMAVEFVCIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 250 ALSALPILLLWIYLSWVSVLLGASLASSMSAFRYQPE 286
>gi|21241707|ref|NP_641289.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
axonopodis pv. citri str. 306]
gi|32699643|sp|Q8PNV2|Y937_XANAC RecName: Full=UPF0761 membrane protein XAC0937
gi|21107075|gb|AAM35825.1| ribonuclease BN [Xanthomonas axonopodis pv. citri str. 306]
Length = 422
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M F+ ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 187 APMAVEFVCIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYG 246
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 247 ALSALPILLLWIYLSWVSVLLGASLASSMSAFRYQPE 283
>gi|152965485|ref|YP_001361269.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151360002|gb|ABS03005.1| putative ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 317
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 26/258 (10%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ A L++FP + + G G + + I+ + A PE +T ++ V
Sbjct: 41 LAAGVAFKAFLAIFPALTAAFLIWGIFGDTAQITSQINGIT-AIPEEARNLVTSQVQNVA 99
Query: 87 -AVPAKGLFTISALAAAYFS-SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV 144
G+ I A+ A +S S+GV+ L + N AY E R G+V L
Sbjct: 100 NGKSTAGITAIVAVVLALWSASSGVQNLMAATNTAYDEKETR----------GFVKLKGT 149
Query: 145 TLVIM--SFVFVAIPLALAYVR----KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
L++ + VF+ + +AL V K A G + L++ R + L + L V+
Sbjct: 150 ALLLTLGAIVFMLLAIALIGVAPVLVKALGASGLVSLVVNVLRWVLLLGLLLVALAVVYR 209
Query: 199 FLP---AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF--STYSTMYAGLASIMTCLV 253
P A ++K +S+ GV + W++ + F+ Y+ T S+Y+ Y +A ++ L+
Sbjct: 210 VAPDRDAPRAKWVSVGAGVAT--VLWLIVSAGFSIYVSTAGQSSYAKNYGSMAGVVVLLM 267
Query: 254 FLYMLGVFFILGAELNAS 271
+L++ +LGAE+NA
Sbjct: 268 WLWLTSYAILLGAEVNAE 285
>gi|239981438|ref|ZP_04703962.1| hypothetical protein SalbJ_18513 [Streptomyces albus J1074]
gi|291453289|ref|ZP_06592679.1| membrane protein [Streptomyces albus J1074]
gi|291356238|gb|EFE83140.1| membrane protein [Streptomyces albus J1074]
Length = 336
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
AA+ + SI PG W+ + Y STYS +Y LA I+ LV+L++ V
Sbjct: 216 AARRRAHSI-PGGALAATLWLTASAGLALYASVLSTYSRLYGSLAGIVVFLVWLWLSNVA 274
Query: 262 FILGAELNASMI 273
+LGA+ A +
Sbjct: 275 LLLGAQFTAELC 286
>gi|118581183|ref|YP_902433.1| putative ribonuclease BN [Pelobacter propionicus DSM 2379]
gi|118503893|gb|ABL00376.1| tRNA-processing RNAse BN [Pelobacter propionicus DSM 2379]
Length = 417
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
++++I L+F+++++P + + S L G I +W + + H+ V + Y+ +Y LA
Sbjct: 181 VSVWIALVFLYIYIPNTRVRFRSALLGGILAGTAWQMAQWAYFHFQVGVANYNAIYGTLA 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ LV++Y + +LG E+ + I+ R+
Sbjct: 241 ALPVFLVWVYTSWLIVLLGLEI---VCIHQRRR 270
>gi|325914257|ref|ZP_08176607.1| tRNA-processing RNAse BN [Xanthomonas vesicatoria ATCC 35937]
gi|325539512|gb|EGD11158.1| tRNA-processing RNAse BN [Xanthomonas vesicatoria ATCC 35937]
Length = 425
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M F+ ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 190 APMAVEFVCIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 250 ALSALPILLLWIYLSWVSVLLGASLASSMSAFRYQPE 286
>gi|332655162|ref|ZP_08420903.1| YihY family protein [Ruminococcaceae bacterium D16]
gi|332516022|gb|EGJ45631.1| YihY family protein [Ruminococcaceae bacterium D16]
Length = 292
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
V +VLF+ +I S YS +Y LAS++ LV+LY G ++GA + I WR P
Sbjct: 232 VACSVLFSWFIDMSSRYSLVYGSLASLIILLVWLYFCGNILVIGAVVGQVWIRGRWRGDP 291
>gi|294626113|ref|ZP_06704720.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666019|ref|ZP_06731281.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599562|gb|EFF43692.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604211|gb|EFF47600.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 425
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A M F+ ++ ++ +P ++ LPG + I + F Y+ F TY +Y
Sbjct: 190 APMAVEFVCIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ L+++Y+ V +LGA L +SM + ++ +
Sbjct: 250 ALSALPILLLWIYLSWVSVLLGASLASSMSAFRYQPE 286
>gi|218460097|ref|ZP_03500188.1| ribonuclease BN [Rhizobium etli Kim 5]
Length = 179
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
G T ++W ++ F+ Y+ F+ Y+ Y L +++ LV++++ V I+GAELNA +
Sbjct: 88 GAALTTVTWAAMSLGFSFYLEHFANYNATYGALGALIGFLVWIWLSVVILIIGAELNAEL 147
>gi|300866202|ref|ZP_07110917.1| putative ribonuclease BN [Oscillatoria sp. PCC 6506]
gi|300335795|emb|CBN56077.1| putative ribonuclease BN [Oscillatoria sp. PCC 6506]
Length = 340
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F++ + P+ + ILPG I I W + L Y+ F Y+ Y + + + L++
Sbjct: 255 FIYRYGPSRHRRGTPILPGAILAAICWAGISGLLRFYVSHFGNYNWTYGTIGTFIILLLW 314
Query: 255 LYMLGVFFILGAELNASM 272
L + +LGA+LN ++
Sbjct: 315 LNFSSLVMLLGAQLNVTV 332
>gi|85711512|ref|ZP_01042570.1| Ribonuclease BN [Idiomarina baltica OS145]
gi|85694664|gb|EAQ32604.1| Ribonuclease BN [Idiomarina baltica OS145]
Length = 282
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI + ++ +P K G F+ I + V LF+ YI F TY +Y LA++
Sbjct: 186 FIAFVLLYQLVPNRPVKFRYAAFGAAFSAILFEVSKQLFSLYITHFPTYQAIYGALATVP 245
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
+V++Y+ + + GAE+ S+ Y
Sbjct: 246 ILIVWIYLSWLIVLAGAEMTVSLEEY 271
>gi|254485604|ref|ZP_05098809.1| ribonuclease BN [Roseobacter sp. GAI101]
gi|214042473|gb|EEB83111.1| ribonuclease BN [Roseobacter sp. GAI101]
Length = 303
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 119/256 (46%), Gaps = 21/256 (8%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A+ ++ A+LS+FP + + + V ++ + G P + I +++ ++
Sbjct: 26 IAAGVAFYAMLSLFPALAALVAILSLVSDPVVVIAQLEDMRGLMPNDVYDIINGQVVSMV 85
Query: 87 AVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMRS---WYITRLISFGYVL 140
++ L T+S L A + + GV A+ I LN Y + + L++FG V+
Sbjct: 86 TTSSETLGWAGTVSLLVALWSARAGVGAMMIGLNSVYNERNRNAAFHYLRALLLTFGLVM 145
Query: 141 ---LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+A +T+VI V +PL + G+++ + R + L GL ++
Sbjct: 146 VGIIALITVVIAPIVLSFVPLGI---------FGSIVAEV--TRWTIAISVLLAGLGVLY 194
Query: 198 LFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P + + L G +F +W V ++ F++Y+ F Y+ +Y + +++ LV+L+
Sbjct: 195 RYGPNRRPARVGWLTFGAVFAVAAWAVVSIGFSYYVANFGNYNQVYGSIGAVIAMLVWLW 254
Query: 257 MLGVFFILGAELNASM 272
+ ++GA NA +
Sbjct: 255 ISSFLVLMGASWNAQV 270
>gi|55378011|ref|YP_135861.1| ribonuclease BN-like [Haloarcula marismortui ATCC 43049]
gi|55230736|gb|AAV46155.1| ribonuclease BN-like [Haloarcula marismortui ATCC 43049]
Length = 345
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P + +PGV F I V VLFT F + ST +ASI+ L +LY++G+
Sbjct: 185 PDTDVSPLEAVPGVAFAAIGLTVAQVLFT----AFKSGSTGGNIIASILVLLSWLYIIGL 240
Query: 261 FFILGAELNA 270
+LGA +NA
Sbjct: 241 VILLGAAINA 250
>gi|313127667|ref|YP_004037937.1| membrane protein [Halogeometricum borinquense DSM 11551]
gi|312294032|gb|ADQ68492.1| predicted membrane protein [Halogeometricum borinquense DSM 11551]
Length = 428
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 56/279 (20%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV----V 66
++ IE E + +A+ IS L+S+ P + G +A F+G V+D+ +
Sbjct: 11 VVRSVIETIQEREVTFLAASISYYTLVSLVPLLTLGLVVASFVGGEALRAYVLDLAQQYL 70
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYR---- 121
A E++A + D Q G ++ +LA + + + L I+ +R Y
Sbjct: 71 LPAGSEIVASALEDPTGQ-------GALSVVSLAVTLWGALKLFRGLDIAFSRIYGSETG 123
Query: 122 --VVEMRSWYITRLISFGY----VLLASVTLVIMSFVFVAI----PLALAYVRKFFPALG 171
V ++R I L S G V LA+ + I+ FV + L + FFP
Sbjct: 124 GIVDQLRDGLIA-LGSLGAGTIGVALATTVVAILDIPFVGVLSPLLLFGLLIAAFFP--- 179
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
F ++F P A + LPG +F + W V +F Y
Sbjct: 180 -----------------------FYYIF-PDAGLTVREALPGTLFAAVGWAVLGAVFGIY 215
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
T +++ L +I+ + + Y G+ + GA +NA
Sbjct: 216 ASTAG--ASVAGALGAILLLVTWFYFSGILILTGAVINA 252
>gi|218962155|ref|YP_001741930.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
gi|167730812|emb|CAO81724.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
Length = 359
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ ++F+++ LP+ + S+ G +T + WV+G F YI + Y +Y +A +
Sbjct: 222 FLAIMFLYMLLPSVRINRASLFRGAFWTTVIWVIGKSAFDFYIYNLTNYERLYGVMAVLP 281
Query: 250 TCLVFLYM 257
L+++Y+
Sbjct: 282 IFLLWIYI 289
>gi|300778688|ref|ZP_07088546.1| YihY family protein [Chryseobacterium gleum ATCC 35910]
gi|300504198|gb|EFK35338.1| YihY family protein [Chryseobacterium gleum ATCC 35910]
Length = 337
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 42/266 (15%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF--------GAWPEVIAKPIT 79
A+ IS S +S+FPFI+F L ++P + F +P + I
Sbjct: 48 AAAISWSFTISLFPFILF------LLSVLPYMPHYAKLQFYIFEVLMHNVFPSNMEGDIR 101
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEAL--RISLNRAYRVVEMRSWYITRLISFG 137
I + KG+ ++ L A F++NG +L + N ++ +++ + ++ I+ G
Sbjct: 102 GYIEANIVPNMKGISNLTILLALLFATNGTFSLINGFNENSDEKLSDVKEFILSFFITIG 161
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPA------LGNLLLIIWNGRI-----YATM 186
++ + + L + A +R F PA + NL II G + Y +
Sbjct: 162 FITIVFLAL-------FGVYYAEVVMRPFTPAYEITWLVDNLSKII--GFVSFPLFYFIL 212
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L LF L V + ++ +PG I T + +VV +F Y+ + Y+ +Y +
Sbjct: 213 LTLFYWLGTVKI------TRFRQAVPGAILTTVLFVVTTYIFAIYVKDIARYNVLYGSIG 266
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
S++ +V++ + + G ELN ++
Sbjct: 267 SMILLMVWVNVNVYLLLFGNELNMAI 292
>gi|256376128|ref|YP_003099788.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
gi|255920431|gb|ACU35942.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
Length = 306
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
I PG + + WV+ + F Y +Y Y LA ++ LV+L++ + +LGAEL+
Sbjct: 218 ITPGGLLAVLLWVIASFGFGFYATHAGSYDKTYGPLAGVVVFLVWLWISNIALLLGAELD 277
Query: 270 ASM 272
A +
Sbjct: 278 AEL 280
>gi|260771961|ref|ZP_05880878.1| ribonuclease BN [Vibrio metschnikovii CIP 69.14]
gi|260612828|gb|EEX38030.1| ribonuclease BN [Vibrio metschnikovii CIP 69.14]
Length = 307
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+GL ++ +P K +++ L G + + + F YI F +Y +Y LA+I
Sbjct: 189 FVGL---YVLVPNKKVRLVHALSGAFVAALLFELSKKAFAAYITQFPSYQLIYGALAAIP 245
Query: 250 TCLVFLYMLGVFFILGAELNASM-IIYYWRKKP 281
V++Y+ + ++GAE A++ W+++P
Sbjct: 246 ILFVWVYLCWLIVLIGAEFTAALGESEQWKREP 278
>gi|190572510|ref|YP_001970355.1| putative ribonuclease [Stenotrophomonas maltophilia K279a]
gi|190010432|emb|CAQ44040.1| putative ribonuclease [Stenotrophomonas maltophilia K279a]
Length = 306
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 30/283 (10%)
Query: 1 MREYFCIVFDIIYDAI-EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQ 57
+R+Y + D A+ + FV+ D A+ +S ALLS+ P +V L L A Q
Sbjct: 12 LRKYIKRLQDSFPMAVAKRFVDVDVLTQAASVSFYALLSMAPLLVLLLWLTASLYPPAQQ 71
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA-KGLFTISAL---AAAYFSSNGVEALR 113
+ I V G+ +A+ + V + G+++ L A A F+ L+
Sbjct: 72 ALIDQISSVAGSSAATVAETVLKNADNQPDVGSLAGVWSTLLLFVGATAVFAQ-----LQ 126
Query: 114 ISLN-----RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+LN R+ +++W R+ SFG VL L++ + +A A + P
Sbjct: 127 NALNLIFRTSGERLEGLKAWLRKRVFSFGVVLALGFLLILSMTATTVLQVAFAQLPSILP 186
Query: 169 ALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
ALG Y T L L+ +G F++ +LP + G + T + +G
Sbjct: 187 ALG-----------YVTSLLLYAVGFAFMYHYLPDRRVAWRQAFIGGVITSALFALGRYG 235
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 236 IGVYIATVAPGSA-YGSMGALVISLVWIYYATVVFFVGALMTA 277
>gi|254381013|ref|ZP_04996378.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194339923|gb|EDX20889.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 337
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
PA + PG W+ + LFT Y F TYS +Y LA ++ LV+L+ +
Sbjct: 252 PAEARGVRRGFPGGALAAFLWLGASALFTLY-TQFGTYSRLYGSLAGVVVFLVWLWFTNL 310
Query: 261 FFILGAELNA 270
+ GA+ NA
Sbjct: 311 ALLAGAQFNA 320
>gi|298528711|ref|ZP_07016115.1| ribonuclease BN [Desulfonatronospira thiodismutans ASO3-1]
gi|298512363|gb|EFI36265.1| ribonuclease BN [Desulfonatronospira thiodismutans ASO3-1]
Length = 443
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 31/270 (11%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A++ F D AS ++ LLS+ P + +A G + + ++ GA E+
Sbjct: 38 ALQGFSRNDCSMRASSLTYYTLLSIVPVMALAFGIAKGFGLDDMLQSQLEQYLGAHEEIF 97
Query: 75 AKPITDEILQ----VLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
DE++Q +L V G+ + L + ++ + +S N + V E RSW
Sbjct: 98 -----DEVVQFSYSMLEVTRGGVIAGVGFLFLLWAVIKVLDHIELSFNAVWGVQEGRSW- 151
Query: 130 ITRLISFGYVLLASVTLVIMS---FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + V++ + LVI+S VF+ + + + +L W + +
Sbjct: 152 VRKFTEYLSVMVLAPVLVILSGSLTVFLTTEIYKYLAEGWLALVADLFQ--WGAQFTPYV 209
Query: 187 LALFIGLIFVHLFLPAAKSK-------IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ I L+F LF+ ++ I I+ G +F + W + ++ V Y+
Sbjct: 210 I---IWLLFTFLFMAMPNTRVNFKAALIAGIISGTMFQLLQWG-----YVNFQVGVVRYN 261
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+Y A++ LV+L + + +LGAEL+
Sbjct: 262 AIYGSFAALPLFLVWLQLSWMIVLLGAELS 291
>gi|167622301|ref|YP_001672595.1| ribonuclease BN [Shewanella halifaxensis HAW-EB4]
gi|167352323|gb|ABZ74936.1| putative ribonuclease BN [Shewanella halifaxensis HAW-EB4]
Length = 326
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ +++ +P K K + L G + + + +G F +Y+ F +Y +Y LA+I V
Sbjct: 192 LLLYMVVPIKKVKFLHALLGALVAAMLFELGKKGFAYYVTQFPSYEAIYGALATIPILFV 251
Query: 254 FLYMLGVFFILGAELNASMIIY 275
++Y+ V ++GAE+ A + Y
Sbjct: 252 WVYVSWVIVLVGAEITAGLPEY 273
>gi|332977963|gb|EGK14707.1| ribonuclease BN [Psychrobacter sp. 1501(2011)]
Length = 523
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 125/278 (44%), Gaps = 40/278 (14%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP--EV 73
I +F+E+D A+ ++ + LLS+ P + TV+ ++ + P E
Sbjct: 23 IRNFIEDDSQQKAASLTYTTLLSIVPIL-----------------TVLLMILSSIPALES 65
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAA-AYFSSN----GVEALRIS-------LNRAYR 121
+ + I+D I L +P GL L A SSN G AL ++ + RA+
Sbjct: 66 VREQISDLIYSNL-LPQSGLQVSQYLNDFAEKSSNLTAIGAMALFVTSIMTLTTIERAFN 124
Query: 122 V---VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
VE RS + ++ + ++ ++ +F+ + +L+++ + G I W
Sbjct: 125 QIWRVEDRSGGVKSILRYWTIITLGPLVLGTAFIVSSTVQSLSFLNQQIGGYG----IDW 180
Query: 179 NGRIYATMLALFI-GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N I A+ I G I ++ F+P AK + + +F +++ + F + F++
Sbjct: 181 NFWIQLVSFAITIAGFIGMYWFIPKAKVPLKNAAIAGVFVAVTFELLKYSFGIVMTNFTS 240
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y +Y A++ L+++Y+ +LG E++ ++ I+
Sbjct: 241 YEAIYGAFAALPIFLLWIYLSWNIILLGVEISYTLTIF 278
>gi|209963912|ref|YP_002296827.1| tRNA-processing ribonuclease BN [Rhodospirillum centenum SW]
gi|288559240|sp|B6IRC8|Y578_RHOCS RecName: Full=UPF0761 membrane protein RC1_0578
gi|209957378|gb|ACI98014.1| tRNA-processing ribonuclease BN [Rhodospirillum centenum SW]
Length = 444
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 29/277 (10%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFG-ANLAGFLGAHQFVPTVIDVVFGA 69
++ A+ F +G+A+A+ ++ + LL++ P + A + F + T +++F
Sbjct: 24 VVRHAVPRFWNNNGFAIAASLTYTTLLALVPLLTVTFAIFSAFPAYGRLRDTARELIF-- 81
Query: 70 WPEVIAKPITDE--------ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +A ++DE I A+ G+ +S + F S VEA +LN +R
Sbjct: 82 --DSLAPSVSDEVQAYFDQFISNAAALTGFGVIGLSLTSILLFFS--VEA---ALNVIFR 134
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R I RL+SF VL IM + A + V A G + +
Sbjct: 135 ATEPRPLVI-RLLSFWAVL------TIMPLLLGASLSVTSGVVADLQATGRDAVTVLRFM 187
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + A L+F L +P + + L G I + V V F YI F TY T+
Sbjct: 188 LPGLLEAAAFTLMF--LMIPNREVQWFDALVGGIAAALLMEVSKVGFGLYIAAFPTYETI 245
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L+ I L +LY + + GAE+ A++ WR
Sbjct: 246 YGALSVIPIFLFWLYTVWSVVLFGAEITATL--PEWR 280
>gi|126665845|ref|ZP_01736826.1| ribonuclease BN-like family protein [Marinobacter sp. ELB17]
gi|126629779|gb|EBA00396.1| ribonuclease BN-like family protein [Marinobacter sp. ELB17]
Length = 441
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 120/263 (45%), Gaps = 12/263 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA-W 70
+Y I F+ A + + LLS+ P + ++ LG HQ + + F
Sbjct: 39 LYALIRDFISGQLTLHAMSLVYTTLLSIVPLLALSFSVLKALGVHQKMEPFLYQFFQPLG 98
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAA-AYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ I I + IL + G+ LA Y + V+ + S N +RV EMRS
Sbjct: 99 PQGIE--IAERILGFVDNMKVGVLGSVGLAVLVYTVVSLVQKIERSFNMIWRVPEMRS-L 155
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIYATML 187
R ++ V++ L++ + A + ++V+ G+++L++ + ++
Sbjct: 156 AQRFSNYLSVIMVGPLLMVSAIGISATIFSSSFVQTLIEIEPFGSVILLVSRFTPFFLVV 215
Query: 188 ALFIGLIFVHLFLPAAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
F FV++F+P + K+ + L G+I +SW +LF ++ + Y+ +Y+ A
Sbjct: 216 GAFT---FVYVFIPNTRVKLRYAFLAGLI-AGVSWQGAGMLFASFVAGSAKYAAIYSSFA 271
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
+ L+++Y+ + +LGA L+
Sbjct: 272 IGIIMLIWIYLNWMILLLGASLS 294
>gi|126736678|ref|ZP_01752417.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
gi|126713793|gb|EBA10665.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
Length = 188
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 141 LASVTLVIMSF-VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
+A V+L I++ V V +P+ LA F P + ++ R + L GL ++ F
Sbjct: 44 VALVSLAIVALTVVVIVPIGLA----FIPVANSTAWLLEGIRWLVALGVLMTGLSLLYRF 99
Query: 200 LPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
PA S+ I G + WV + ++Y+ F++Y+ +Y + +++ L++LY+
Sbjct: 100 GPARIGSRGRWITVGAFAVVVLWVAASAGLSYYLTNFASYNEVYGSIGAVIGLLLWLYVS 159
Query: 259 GVFFILGAELN 269
+LGA LN
Sbjct: 160 AYLILLGAALN 170
>gi|256390949|ref|YP_003112513.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256357175|gb|ACU70672.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 355
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 21/233 (9%)
Query: 38 SVFPFIVFGAN----LAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI----LQVLAVP 89
S+ P + A L G++GA + V + + GA +++ P +I +LA
Sbjct: 78 SLPPLAIGLAGTLGYLNGWIGAARIV-EIKHHIEGAAGTMLSGPGVQKIDGLLTNLLANG 136
Query: 90 AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
L +I L A + S + ++ AY + R TRL++FG +L L++
Sbjct: 137 HPELISIGFLLALWAGSRAMNVYVDTITIAYGLSGRRGIVRTRLLAFGMYMLG---LLLG 193
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLII-WNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
S + + + P + +L+ + W + T+LA F+ ++ HL +P ++
Sbjct: 194 SVALPLLVIGPDLLVSALPPITDLIHAVYWP--LMLTVLAAFLNTLY-HLAVP-VRTPWS 249
Query: 209 SILPGVIFTWISWVVGAVLFTHYI-VTFS---TYSTMYAGLASIMTCLVFLYM 257
LPG + + W+ G+ L Y+ TFS + +++Y GLA+ + LV+LY+
Sbjct: 250 QDLPGTVLALLLWLGGSALLRDYVSTTFSDTKSTNSLYGGLAAAVAILVWLYV 302
>gi|227539060|ref|ZP_03969109.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
gi|227241116|gb|EEI91131.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
Length = 320
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 26/273 (9%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
F II + F+ ED ++ ++ + S+ P +V +LAG F G V +
Sbjct: 16 FSIIKTSAMGFINEDCLKYSASLAYYTIFSIGPILVLIISLAGVFFGQDAIEGKVFTEMK 75
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAY------ 120
G A+ I + I+ + L + ++ + V ++ S+NR +
Sbjct: 76 GLVGPSAARQIQEVIMNLKLSGKSNLALVVSIITLLIGATSVFGDIQNSINRIWHVRAKP 135
Query: 121 -----RVVEMRSWYITRLISFGYVLLAS--VTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+V++ R + +IS G++L+ + V VI++F ++++FP +
Sbjct: 136 KKGWVKVIKDRLLSSSLVISLGFLLMVTLVVNGVILAFT--------DRLQRYFPDITVH 187
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
LL N I ++ + G+IF L P K + ++ G FT I +V+G + Y+
Sbjct: 188 LLDAINFSISFGVIFILFGIIFRAL--PDVKIEWRTVRSGAFFTAILFVIGRFVIGLYLQ 245
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
T T ST Y SI+ L+++Y GA
Sbjct: 246 TSGTEST-YGAAGSIILVLLWVYYTAAILYFGA 277
>gi|294626489|ref|ZP_06705088.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292599179|gb|EFF43317.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 299
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 101 LQNALNLIFRTDKQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 160
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 161 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGR 209
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 210 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 253
>gi|21244599|ref|NP_644181.1| ribonuclease BN [Xanthomonas axonopodis pv. citri str. 306]
gi|21110279|gb|AAM38717.1| ribonuclease BN [Xanthomonas axonopodis pv. citri str. 306]
Length = 299
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 101 LQNALNLIFRTDKQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 160
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 161 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGR 209
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 210 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 253
>gi|284993043|ref|YP_003411597.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284066288|gb|ADB77226.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 347
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 18/266 (6%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ F E++ A+ ++ L++FP ++ ++ G L Q + + V A
Sbjct: 60 LTEFSEDNLTDWAAALTYYGTLALFPALIALVSIVGLLTNPQQLTDALTAVVPAQAADTL 119
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRS-WYITRL 133
P+ +++ A GL + LAAA +S++G V A + N Y E R W + L
Sbjct: 120 NPVIEQLAGNTAPVGIGL--VIGLAAAIWSASGYVGAFTRAANVVYETPEGRKVWKLKPL 177
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLLIIWNGRIYAT--MLAL 189
+L+ + ++ + + + L+ V A+G + ++ +W+ YA ++ +
Sbjct: 178 ----QLLVTLIGVLFAALIVAMLVLSGGVVDAVAGAIGLPDAVVTVWS---YAKWPVVVV 230
Query: 190 FIGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L+ L+ K+ PG + W + LF Y+ FS Y+ Y LA
Sbjct: 231 LVALMIAVLYYSTPNVKLRGFRFTSPGAAVALLVWAAASALFAFYVANFSNYNATYGALA 290
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
++ LV+ ++ + + G EL+A +
Sbjct: 291 GVIVFLVWFWITNLALLFGIELDAEI 316
>gi|256395761|ref|YP_003117325.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256361987|gb|ACU75484.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 365
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 4/186 (2%)
Query: 90 AKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
A G + LA A +S++G V A + N Y + E R + T + G LL + L++
Sbjct: 148 AGGTLAVVGLAGALWSASGYVAAFIRASNVVYDMREGRPVWKTTPLRVGLTLL-MMALLL 206
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI-FVHLFLPAAKSKI 207
S V V LA LG+ L+ W+ + ++ L +I ++ P + +
Sbjct: 207 ASAVIVVFTGPLAQRAGDLLGLGHTALVAWSIAKWPVLVVLVAFMIALLYWAAPNVRDRG 266
Query: 208 MS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ PG + + W++ + F Y+ F++Y+ Y +A ++ LV+L++ + +LG
Sbjct: 267 FRWVSPGSLLAVVLWLILSAGFALYVANFASYNKTYGTVAGVIVFLVWLWLSNLAILLGL 326
Query: 267 ELNASM 272
E +A +
Sbjct: 327 EFDAEL 332
>gi|298208650|ref|YP_003716829.1| hypothetical protein CA2559_10418 [Croceibacter atlanticus
HTCC2559]
gi|83848573|gb|EAP86442.1| hypothetical protein CA2559_10418 [Croceibacter atlanticus
HTCC2559]
Length = 323
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I R+ISFG +L+ + L++ + I YV + P + T +AL
Sbjct: 136 IDRVISFGMILVVGLMLLVSLVISATIGAISEYVEQIAPNI--------------TAIAL 181
Query: 190 FIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT------HYIVTF----STY 238
IG +F ++F+ A + I ILP V W ++GA + T Y++ F S
Sbjct: 182 DIGNFLFSYIFITALFASIFKILPDVKLKWRVTLLGASVTTLLFLIGEYLLGFYFGHSEP 241
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y G +S++ L+++Y + GA +Y K
Sbjct: 242 ASVYGGASSVVLILLWVYYTCLIVFFGACFTVEYALYKNEK 282
>gi|294666747|ref|ZP_06731982.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292603492|gb|EFF46908.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 299
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 101 LQNALNLIFRTDKQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 160
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 161 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGR 209
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 210 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 253
>gi|304393249|ref|ZP_07375177.1| ribonuclease BN [Ahrensia sp. R2A130]
gi|303294256|gb|EFL88628.1| ribonuclease BN [Ahrensia sp. R2A130]
Length = 318
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE + + + + +L+ P GL +S A + S G AL +++R YR + R
Sbjct: 84 PEAVQAVVYERLDALLSQPQVGLGIGLIVSFAVALWSGSRGTNALVATISRIYRETDDRG 143
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-------------YVRKFFPALGNLL 174
+ + +S L A V L A+P+A+ +VR +P L L
Sbjct: 144 FLASAALSLSLTLGALVFLTASLLAIAAVPIAVNLLPLPSWMETAALWVR--WPLLAIL- 200
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+YA +L LF L +K I G + + W+ + LF+ Y+
Sbjct: 201 -------VYAAILILF------RLAPDREDAKWRWISLGAAVSAVLWLALSSLFSFYVKE 247
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F YS + L+ + ++++Y + LGA LNA +
Sbjct: 248 FGNYSATFGSLSVAVILMLWIYYSTMIVSLGAALNAEI 285
>gi|284164911|ref|YP_003403190.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284014566|gb|ADB60517.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 397
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+ P S ++PGV+ + W + LF Y V+F++ S L +I+ L +LY
Sbjct: 185 YFPDVGSSKRQVIPGVVVAALGWTLLQSLFRVY-VSFASSSESAGPLGAILLLLTWLYFG 243
Query: 259 GVFFILGAELNA 270
G+ ++GA +NA
Sbjct: 244 GMILLVGAVINA 255
>gi|255535679|ref|YP_003096050.1| Ribonuclease BN [Flavobacteriaceae bacterium 3519-10]
gi|255341875|gb|ACU07988.1| Ribonuclease BN [Flavobacteriaceae bacterium 3519-10]
Length = 338
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 24/254 (9%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF--GAWPEVIAKPITDEILQV 85
A+ IS S LS+FPFI+F +L +L + + I V +P I + ++ I
Sbjct: 55 AASISWSFFLSLFPFILFLLSLLPYLPHYDKLQFYIFEVLMLNVFPAHIQQEVSGYINSF 114
Query: 86 LAVPAKGLFTISALAAAYFSSNGVEAL--RISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ + + T++ + A F+ NG +L +LN + ++ +++ I+ ++ L
Sbjct: 115 IIPNMQNISTLTIVFAMVFAVNGTHSLINGFNLNTNLQRGAVKEYFVAFGITIAFIFLII 174
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG-----LIFVHL 198
+L + + V + L F P + I W R ++ FI LI + L
Sbjct: 175 ASLFGVYYSEVVLKL-------FTPEIN----ISWLVRNMTKIIG-FISFPVFYLILLAL 222
Query: 199 FLPAAKSKIMSI---LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
F KI S LPG + T + ++V F Y+ F+TY+ +Y + +I+ ++++
Sbjct: 223 FYWVGCLKITSFKQALPGAVLTTLLFIVLTYFFAIYVRNFATYNVLYGSIGTIILVMIWV 282
Query: 256 YMLGVFFILGAELN 269
+ + +LG ELN
Sbjct: 283 NLNIILILLGNELN 296
>gi|237807236|ref|YP_002891676.1| ribonuclease BN [Tolumonas auensis DSM 9187]
gi|288559245|sp|C4L9W1|Y461_TOLAT RecName: Full=UPF0761 membrane protein Tola_0461
gi|237499497|gb|ACQ92090.1| ribonuclease BN [Tolumonas auensis DSM 9187]
Length = 302
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F +YI F TY ++Y LA I +++LYM + +LGAE A++
Sbjct: 240 FGYYIAHFGTYKSIYGALAGIPILMIWLYMSWLVVLLGAEFTATL 284
>gi|163733662|ref|ZP_02141104.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
gi|161392773|gb|EDQ17100.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
Length = 112
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
AA+ K S+ G + + W+V + F Y+ F +Y+ + LA ++ L++ ++
Sbjct: 10 DAAEWKWASV--GAVVGCLMWIVASAGFAFYVSNFGSYNESFGTLAGVIVLLMWFWISAF 67
Query: 261 FFILGAELNASM 272
+LGAELNA +
Sbjct: 68 IILLGAELNAEL 79
>gi|298386552|ref|ZP_06996108.1| ribonuclease [Bacteroides sp. 1_1_14]
gi|298260929|gb|EFI03797.1| ribonuclease [Bacteroides sp. 1_1_14]
Length = 310
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 16/275 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH--QFV 59
++ + F II D ++ FV+++ +++ ++ + L S+ P + FL +
Sbjct: 8 KQKLSLAFKIIKDTVQGFVDDNVMRLSASLAYATLFSIIPLFSLLITIGVFLQIDLTDQL 67
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNR 118
T I+ V G P+V+ + + I TI ++ FS+ V A ++ SLN
Sbjct: 68 YTQIEPVVG--PKVV-EALRSIIENATEADVSSFATIISVGVTIFSATTVFAEIQSSLNT 124
Query: 119 AY--RVVEMRSW--YI-TRLISFGYVLL-ASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+ + V +SW YI RL+SF +L+ A + L+ + + L+ Y+ +
Sbjct: 125 IWGIKAVPRKSWLKYIKNRLLSFSVILVFAFILLITFTITNLITDLSNRYIANNPDVAES 184
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L+ +I I+ ++ I + LP AK K + G + T + + G + YI
Sbjct: 185 LVKVI---GIFVNIVVTTIIFTLIFKILPDAKIKSKDVFIGALVTTVLLLAGQWGISFYI 241
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ T+Y A + ++++Y + GAE
Sbjct: 242 A-IANIETVYGAAAFMAIFIIWIYYSAIIIYTGAE 275
>gi|188993400|ref|YP_001905410.1| Putative ribonuclease BN [Xanthomonas campestris pv. campestris
str. B100]
gi|167735160|emb|CAP53372.1| Putative ribonuclease BN [Xanthomonas campestris pv. campestris]
Length = 315
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 122 LQNALNLIFRTDKQRLDGIMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 181
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 182 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVNWRQAFVGGVITSLLFALGR 230
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI + S Y + +++ LV++Y V F +GA L A
Sbjct: 231 YAIGMYIAKAAPGSA-YGSMGTLVILLVWMYYASVVFFIGALLTA 274
>gi|182440418|ref|YP_001828137.1| hypothetical protein SGR_6625 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326781087|ref|ZP_08240352.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
gi|178468934|dbj|BAG23454.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326661420|gb|EGE46266.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
Length = 309
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 186 MLALFIGLIFVHLFL--PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L L + + + LF P + + LPG + W+ + LF Y +YS +Y
Sbjct: 198 LLVLLVACLIMVLFSTGPRSARGVRRGLPGGVLAAFCWLTASALFALYATQVGSYSRLYG 257
Query: 244 GLASIMTCLVFLYMLGVFFILGAELN 269
LA ++ L++++ + + GA+ N
Sbjct: 258 SLAGLVVFLIWVWFANLSLLAGAQFN 283
>gi|297198844|ref|ZP_06916241.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197711235|gb|EDY55269.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 354
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
I PG + + WV + F Y F +Y+ Y LA + LV+L++ + +LG E +
Sbjct: 253 ISPGSVVATLVWVAASAGFAVYAANFGSYNKTYGTLAGAIVFLVWLWLTNLAILLGLEFD 312
Query: 270 ASM 272
A +
Sbjct: 313 AEL 315
>gi|322368243|ref|ZP_08042812.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
gi|320552259|gb|EFW93904.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
Length = 417
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 29/273 (10%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ I++ E++ +A+ I+ A +S+ P ++ +A F+G F TV+ V +
Sbjct: 18 ETIDYAREQEITFLAAGIAYYAFVSILPALLLALAIASFVGGDAFANTVVGTV-----QS 72
Query: 74 IAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ P I+Q A G + + +L + + L + +R Y V + +I
Sbjct: 73 LLSPKAKSIVQDSLSSASGRRSATVVGSLVLVWSTLRVFRGLDEAFSRVYD-VNVTEPFI 131
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ A+V L +++ + A V P+L + R +AL
Sbjct: 132 DTMTD------AAVVLAVIALGVAGV----AVVNILLPSLSWVPF-----RRTIVSVALL 176
Query: 191 IGLIFVHL----FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
GLI V L F P + +LPG +F + W +F Y+ + + +S Y L
Sbjct: 177 FGLIPVFLPLYYFFPDTDVTVREVLPGTLFATLGWTALQAIFGVYVDSAAQFSA-YGVLG 235
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + +LY+ G+ + GA +NA + ++RK
Sbjct: 236 GALLVVTWLYLGGIVLLFGAVINAVLAGRHFRK 268
>gi|289583130|ref|YP_003481596.1| ribonuclease BN [Natrialba magadii ATCC 43099]
gi|289532683|gb|ADD07034.1| ribonuclease BN [Natrialba magadii ATCC 43099]
Length = 378
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+ P +LPGV+ I W V LF H V+F+ S + +++ L +LY
Sbjct: 185 YFPDVDVTAREVLPGVVVAAIGWTVLQSLF-HVYVSFAGDSEAAGPVGAVLLLLTWLYFG 243
Query: 259 GVFFILGAELNA 270
G+ ++GA +NA
Sbjct: 244 GLILLVGAVINA 255
>gi|170728937|ref|YP_001762963.1| ribonuclease BN [Shewanella woodyi ATCC 51908]
gi|226737458|sp|B1KLY8|Y4618_SHEWM RecName: Full=UPF0761 membrane protein Swoo_4618
gi|169814284|gb|ACA88868.1| ribonuclease BN [Shewanella woodyi ATCC 51908]
Length = 336
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ +++ +P K K L G I + + G F Y+ F TY +Y LA+I +
Sbjct: 197 LLIYMVVPNTKVKFFHALLGAIVAALMFEFGKKGFALYLTKFPTYEAIYGALATIPILFL 256
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y+ + +LGA + A+M Y +K+
Sbjct: 257 WVYLSWMIVLLGAVITAAMPEYLDKKQ 283
>gi|149908553|ref|ZP_01897215.1| ribonuclease BN [Moritella sp. PE36]
gi|149808387|gb|EDM68324.1| ribonuclease BN [Moritella sp. PE36]
Length = 300
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
FT Y+V F +Y +Y LA+I LV++Y+ + +LGAE+ AS+
Sbjct: 241 FTWYLVQFPSYEVIYGALATIPILLVWIYLCWLIVLLGAEITASL 285
>gi|78049549|ref|YP_365724.1| putative ribonuclease BN [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78037979|emb|CAJ25724.1| putative ribonuclease BN [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 347
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 149 LQNALNLIFRTDKQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 208
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 209 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGR 257
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 258 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 301
>gi|325928844|ref|ZP_08190011.1| putative membrane protein [Xanthomonas perforans 91-118]
gi|325540817|gb|EGD12392.1| putative membrane protein [Xanthomonas perforans 91-118]
Length = 347
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 149 LQNALNLIFRTDKQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 208
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 209 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGR 257
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 258 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 301
>gi|289666290|ref|ZP_06487871.1| ribonuclease BN [Xanthomonas campestris pv. vasculorum NCPPB702]
gi|289670010|ref|ZP_06491085.1| ribonuclease BN [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 320
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 122 LQNALNLIFRTDKQRLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 181
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 182 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFALGR 230
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 231 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 274
>gi|325918192|ref|ZP_08180341.1| putative membrane protein [Xanthomonas vesicatoria ATCC 35937]
gi|325535599|gb|EGD07446.1| putative membrane protein [Xanthomonas vesicatoria ATCC 35937]
Length = 322
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 126 LQNALNLIFRTDKQRLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 185
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 186 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFALGR 234
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 235 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 278
>gi|29827757|ref|NP_822391.1| ribonuclease BN family membrane protein [Streptomyces avermitilis
MA-4680]
gi|29604858|dbj|BAC68926.1| putative membrane protein, ribonuclease BN-like family
[Streptomyces avermitilis MA-4680]
Length = 339
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P ++ LPG + + W+ + FT Y YS +Y LA ++ LV+L++ +
Sbjct: 253 PREVRELRHALPGGMLAALLWLTASAGFTAYASGLGAYSKLYGSLAGVIVFLVWLWVSNL 312
Query: 261 FFILGAELNASMI 273
+ GA+ A +
Sbjct: 313 ALLAGAQFTAELT 325
>gi|322385717|ref|ZP_08059361.1| ribonuclease BN [Streptococcus cristatus ATCC 51100]
gi|321270455|gb|EFX53371.1| ribonuclease BN [Streptococcus cristatus ATCC 51100]
Length = 306
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA-WPEVIAKPITDEILQVLAVPAKGLF 94
L+S+FP ++ AN+ + Q P + V PE + I + VL P+ GL
Sbjct: 38 LISIFPLLLIAANILPYF---QIRPDELLVALKDLLPESLYLTIAKVVRDVLTKPSTGLL 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+IS L+A + S + L+ + N+ Y + R R+ +F
Sbjct: 95 SISILSALWTFSQSMTFLQKAFNKCYGTKQGRGLIWERIFAF 136
>gi|196231818|ref|ZP_03130674.1| ribonuclease BN [Chthoniobacter flavus Ellin428]
gi|196223940|gb|EDY18454.1| ribonuclease BN [Chthoniobacter flavus Ellin428]
Length = 311
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 110/283 (38%), Gaps = 37/283 (13%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPTVIDVVFGA 69
I++ A+ + E DG A+ + A ++FP IV ++ F G I
Sbjct: 25 ILWRAVVKYDETDGEQRAASFAYYAFFAMFPLIVLLVTISTNFFGNRAVATDRIMSYIAP 84
Query: 70 WPEVIAKP------ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + K D ++Q F I A +A F +AL +NRA+
Sbjct: 85 YMPLDTKDSKMIVTTIDGVVQSRKSAGIIAFGILAWSALKF----FQALVHGVNRAWGTK 140
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF---------------P 168
+ SW+ + + + + L++ + IP YV F+ P
Sbjct: 141 QY-SWWRMPIKNLAMTAILASALLLGTI----IPAIFKYVEYFYWTHSWEVHLDFWFVKP 195
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
N+L + ++ LF G + + F P ++ + + P +F ++ + LF
Sbjct: 196 LFDNVLYPL------VPLVVLFYGFVMFYKFAPRRRTLLREVWPAALFVTLALEILQRLF 249
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y ++ +Y +++ L+++Y+ G I+G L A+
Sbjct: 250 ILYTRNIGHFNALYGTFGTVVALLLWIYLSGSIIIMGGCLCAA 292
>gi|284031261|ref|YP_003381192.1| ribonuclease BN [Kribbella flavida DSM 17836]
gi|283810554|gb|ADB32393.1| ribonuclease BN [Kribbella flavida DSM 17836]
Length = 420
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 17/246 (6%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA---- 90
A+LS+ P I A GF+ + F I+ + ++ A+ +TD+ ++ + VP
Sbjct: 35 AILSLPPLIFGLAGSIGFIASRYFEVETIEDIKVQIADLAARALTDDSVKTVIVPTLNQV 94
Query: 91 -----KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
+ +I + A + S + ++ Y + R TR +SF A V
Sbjct: 95 LNGGRPDVISIGFVLALWSGSRALNVFVDTITIMYGMGGKRGIVRTRALSFSLYCAALVI 154
Query: 146 LVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK 204
VI+ + +A P A V PA L L + W + + A F+ ++ HL +P +
Sbjct: 155 GVIVLPLVLAGPDA---VNALLPARLDFLNQLYWP--VVTILSAGFLNTLY-HLSVPV-R 207
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ +S LPG W++G+ + + + +++Y LA+ + L++LYM + ++
Sbjct: 208 TPWVSDLPGSFLALSIWILGSFVLRWILQSTVGGTSIYGPLAAPIAVLMWLYMSAIAVLI 267
Query: 265 GAELNA 270
GA LNA
Sbjct: 268 GAALNA 273
>gi|254523442|ref|ZP_05135497.1| tRNA-processing ribonuclease BN [Stenotrophomonas sp. SKA14]
gi|219721033|gb|EED39558.1| tRNA-processing ribonuclease BN [Stenotrophomonas sp. SKA14]
Length = 414
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+IL VI + W +GA Y+ +F +Y +Y +A + L+++Y+ V +LGA L
Sbjct: 210 AILAAVILELVKWGIGA-----YLGSFQSYQKLYGTVAFVPILLLWIYLCWVAVLLGASL 264
Query: 269 NASMIIYYWR 278
++SM + ++
Sbjct: 265 SSSMAAFRYQ 274
>gi|197104295|ref|YP_002129672.1| ribonuclease RNase BN (RBN) transmembrane protein [Phenylobacterium
zucineum HLK1]
gi|196477715|gb|ACG77243.1| ribonuclease RNase BN (RBN) transmembrane protein [Phenylobacterium
zucineum HLK1]
Length = 315
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 114/250 (45%), Gaps = 11/250 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A I+ LL++FP + ++ G + V + + +P + + + ++++++
Sbjct: 4 VAGSITFFTLLAIFPALGAFVSIYGLIADVAAVNDQLAQLSLVFPAEVVRIVGEQMMRLA 63
Query: 87 AVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ L F +S L + + ++ G++AL LN AY E R+++ +++ + L
Sbjct: 64 TERSANLSVAFLVSLLLSIWTANAGMKALFDGLNIAYGETETRNFFYRTALTYAFTLAFL 123
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ + ++S + VA P+AL + F G + + W A + F P
Sbjct: 124 LFITLVSAILVAAPIAL---KTFGLRSGWMFGVRW----LALFFVAAAAFSVAYRFGPCR 176
Query: 204 K-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ ++ + G + + W+ G+ F+ Y+ + Y L + + +++++ +
Sbjct: 177 RRARWRWVTWGAVVAAVLWMAGSAGFSWYVNNIAHLQVTYGSLGAAIGFMLWVWFSVLVV 236
Query: 263 ILGAELNASM 272
+ GAELNA +
Sbjct: 237 LTGAELNAEI 246
>gi|157963720|ref|YP_001503754.1| ribonuclease BN [Shewanella pealeana ATCC 700345]
gi|189039573|sp|A8H9I2|Y3909_SHEPA RecName: Full=UPF0761 membrane protein Spea_3909
gi|157848720|gb|ABV89219.1| putative ribonuclease BN [Shewanella pealeana ATCC 700345]
Length = 340
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 112/284 (39%), Gaps = 44/284 (15%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFP-----------FIVFGA---NLAGFLGAHQFVPT 61
+ F E+ A H++ LLS+ P F VF L GF+ F+P
Sbjct: 25 LSRFKEDQVNIKAGHLAYVTLLSLVPIVAVMFSMLSAFPVFSGIREKLEGFV-YDNFLPA 83
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
D V E +A + ++A+ L ISA+ A LN +R
Sbjct: 84 AGDTVQIYINEFVANASKGTSVGIVALMVVALMLISAIDKA-------------LNSIWR 130
Query: 122 VVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
E R ++ +++ G VL+ + +LV S++ + + P L L
Sbjct: 131 TKEKRQAAVSFSMYWMVLTLGPVLVGA-SLVATSYIVSLKLFSETELSGVVPILIERL-- 187
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
ML + +++ +P K K + L G + + + +G F Y+ F
Sbjct: 188 --------PMLFSVAAFLLLYMVVPIKKVKFLHALLGALVAAMLFELGKKGFAFYVTQFP 239
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y +Y LA+I V++Y+ V ++GAE+ A + Y K
Sbjct: 240 SYEAIYGALATIPILFVWVYVSWVIVLVGAEITAGLPEYLHECK 283
>gi|84625563|ref|YP_452935.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84369503|dbj|BAE70661.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 299
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 101 LQNALNLIFRTDKERLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 160
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 161 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGR 209
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 210 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 253
>gi|190572909|ref|YP_001970754.1| ribonuclease BN/unknown domain fusion protein [Stenotrophomonas
maltophilia K279a]
gi|226737461|sp|B2FQ10|Y865_STRMK RecName: Full=UPF0761 membrane protein Smlt0865
gi|190010831|emb|CAQ44440.1| putative ribonuclease [Stenotrophomonas maltophilia K279a]
Length = 424
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+IL VI + W +GA Y+ +F +Y +Y +A + L+++Y+ V +LGA L
Sbjct: 220 AILAAVILELVKWGIGA-----YLGSFQSYQKLYGTVAFVPILLLWIYLCWVAVLLGASL 274
Query: 269 NASMIIYYWR 278
++SM + ++
Sbjct: 275 SSSMAAFRYQ 284
>gi|333023117|ref|ZP_08451181.1| putative ribonuclease BN family membrane protein [Streptomyces sp.
Tu6071]
gi|332742969|gb|EGJ73410.1| putative ribonuclease BN family membrane protein [Streptomyces sp.
Tu6071]
Length = 298
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 176 IIWNGRIYATMLALFIGLIFVHLFL-PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ W + +L L GL +V P + LPG + + W++ FT Y
Sbjct: 176 LAWRVLRWPALLCLVSGLAWVAFSNGPRIARRRRYSLPGGVLATVLWLLATAGFTLYTSL 235
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
TYS +Y LA I+ L++L++ + + GA+ A +
Sbjct: 236 IGTYSALYGSLAGIVVFLIWLWLSNLALLAGAQFAAEL 273
>gi|194364494|ref|YP_002027104.1| ribonuclease BN/unknown domain fusion protein [Stenotrophomonas
maltophilia R551-3]
gi|226737460|sp|B4SKS3|Y716_STRM5 RecName: Full=UPF0761 membrane protein Smal_0716
gi|194347298|gb|ACF50421.1| ribonuclease BN [Stenotrophomonas maltophilia R551-3]
Length = 424
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+IL VI + W +GA Y+ +F +Y +Y +A + L+++Y+ V +LGA L
Sbjct: 220 AILAAVILELVKWGIGA-----YLGSFQSYQKLYGTVAFVPILLLWIYLCWVAVLLGASL 274
Query: 269 NASMIIYYWR 278
++SM + ++
Sbjct: 275 SSSMAAFRYQ 284
>gi|218289811|ref|ZP_03494011.1| ribonuclease BN [Alicyclobacillus acidocaldarius LAA1]
gi|218240102|gb|EED07287.1| ribonuclease BN [Alicyclobacillus acidocaldarius LAA1]
Length = 285
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 119/261 (45%), Gaps = 27/261 (10%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA----WPEVI-AK 76
D ++A+ I+ A+ S+ P ++ A + H+ + +++V GA +P++ A
Sbjct: 22 HDITSLAAQIAFYAMFSLLPLLILVMYGASLVVPHRII---VEMVLGALRPYYPDLQNAN 78
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS- 135
+ + L L+ +S ++ A+ +++ + A++ +L+R + V RS+ R I+
Sbjct: 79 QMLENSLNKLSDIGARAGLVSFISLAWSATSALIAVQQALDRIFEVDVPRSFLARRAIAA 138
Query: 136 ---FGYVLLASVTLVIMSF---VFVAIPLALAYVRKF--FPALGNLLLIIWNGRIYATML 187
V+LA V+ M+ V IP +V F F + +L L
Sbjct: 139 LFLVALVILAVVSAFAMALYPWVVHHIPAGTWFVTAFTRFSGVTRMLY----------PL 188
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+LF+ V+ +LP+ + + G + + + +LF Y TY +Y GL
Sbjct: 189 SLFVTCFVVYRYLPSRRVNPNCTILGALAATVLLDLARLLFVVYAAHAVTYHAVYGGLTV 248
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
++ + ++Y+ + +LGAE+
Sbjct: 249 VILLIFWMYIALIILLLGAEI 269
>gi|300770567|ref|ZP_07080446.1| ribonuclease II [Sphingobacterium spiritivorum ATCC 33861]
gi|300763043|gb|EFK59860.1| ribonuclease II [Sphingobacterium spiritivorum ATCC 33861]
Length = 320
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 26/273 (9%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
F II + F+ ED ++ ++ + S+ P +V +LAG F G V +
Sbjct: 16 FSIIKTSAMGFINEDCLKYSASLAYYTIFSIGPILVLIISLAGVFFGQDAIEGKVFTEMK 75
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAY------ 120
G A+ I + I+ + L + ++ + V ++ S+NR +
Sbjct: 76 GLVGPSAARQIQEVIMNLKLSGKSNLALVVSIITLLIGATSVFGDIQNSINRIWHVRAKP 135
Query: 121 -----RVVEMRSWYITRLISFGYVLLAS--VTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+V++ R + +IS G++L+ + V VI++F ++++FP +
Sbjct: 136 KKGWVKVLKDRLLSSSLVISLGFLLMVTLVVNGVILAFT--------DRLQRYFPDITVH 187
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
LL N I ++ + G+IF L P K + ++ G FT + +V+G + Y+
Sbjct: 188 LLDAINFSISFGVIFILFGIIFRAL--PDVKIEWRTVRSGAFFTAVLFVIGRFVIGLYLQ 245
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
T T ST Y SI+ L+++Y GA
Sbjct: 246 TSGTEST-YGAAGSIILVLLWVYYTAAILYFGA 277
>gi|323494559|ref|ZP_08099663.1| hypothetical protein VIBR0546_13332 [Vibrio brasiliensis LMG 20546]
gi|323311162|gb|EGA64322.1| hypothetical protein VIBR0546_13332 [Vibrio brasiliensis LMG 20546]
Length = 304
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+GL +L +P K +I + G I + + F YI F +Y +Y LA+I
Sbjct: 189 FVGL---YLLVPNKKVRISHAMVGAIIAALLFEASKKGFAAYITQFPSYQLIYGALAAIP 245
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 246 ILFVWVYLCWLIVLVGAEVTAAL 268
>gi|262202456|ref|YP_003273664.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
gi|262085803|gb|ACY21771.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
Length = 337
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 25/260 (9%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPEVIA 75
F ++ G +A+ I+ +S+FP ++ ++ G + + ++D P
Sbjct: 26 KFFDDQGGYLAALITYYGFISLFPLLLVFTSVLGLVLEDNPELQERIVDSALSQIPV--- 82
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMRSWYITRLI 134
I D++ Q + L + + +A + + GV A++ ++N + V ++
Sbjct: 83 --IGDQLGQPGQLSGSTLAVVIGVVSAVYGALGVSVAIQNAMNIVWTVPRNERPNPIQVR 140
Query: 135 SFGYVLLASVTLVIMSFVF---VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
G +LLA+V LVI+ V+ + L + +G LLL I A+F+
Sbjct: 141 VKGALLLATVGLVIIGLTALNGVSAAIDLGSDGRVLATVGTLLLYI----------AVFV 190
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL-ASIMT 250
F F A I +LPG + + W + T +I S+ G+ A ++
Sbjct: 191 ---FGFRFGTARDVSIRDVLPGAVGAAVGWQILQTFGTVFIQRVIANSSATTGVFAVVLG 247
Query: 251 CLVFLYMLGVFFILGAELNA 270
L FLY+ V ++ E NA
Sbjct: 248 LLAFLYIAAVMVVICLECNA 267
>gi|284991960|ref|YP_003410514.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284065205|gb|ADB76143.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 354
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F H+ LP + LPG + +VV A+ Y+ T + Y LA+ + L+F
Sbjct: 247 FYHVVLPR-RLPWHRHLPGTVLAVAFFVVTALATRTYVADILTTTLPYGALATPIAVLLF 305
Query: 255 LYMLGVFFILGAELNASM 272
+ G+ +LGAELNA++
Sbjct: 306 CFFFGMSVLLGAELNATI 323
>gi|163741955|ref|ZP_02149344.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
gi|161384676|gb|EDQ09056.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
Length = 285
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
PG I + WV G++ F+ Y+ F +Y+ + L+ ++ L ++++ + GA L+A
Sbjct: 194 PGAILSCTLWVAGSIGFSLYVQAFGSYNETFGALSGVILLLTWMWLSAFVILFGAGLDAE 253
>gi|311744221|ref|ZP_07718025.1| ribonuclease BN family integral membrane protein [Aeromicrobium
marinum DSM 15272]
gi|311312394|gb|EFQ82307.1| ribonuclease BN family integral membrane protein [Aeromicrobium
marinum DSM 15272]
Length = 325
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 8/251 (3%)
Query: 26 AMASHISLSAL-LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQ 84
A+ + ISL AL L V + F A+ G GA + V ++ G + + + + +
Sbjct: 51 ALFTMISLPALILVVLGSLGFVADALGPAGAQELNRIVFELPRGFFSDRVYASYENLATR 110
Query: 85 VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV 144
VLA + +I AL + + S ++ AY + R + RL++ G + +
Sbjct: 111 VLADGRADVISIGALLSLWTGSRATNRALETITIAYDIDRPRPGWRRRLLALGLTVAGLL 170
Query: 145 TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV---HLFLP 201
+ + + V P + ++ A L ++ G +Y +L L HL +P
Sbjct: 171 AAIAILPLLVLGPRVVEWLAPEAVASATLTVL---GALYWPVLGLLAITALASLYHLGVP 227
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
++ LPG I W++ A Y+ +++ LA + +++LY+ V
Sbjct: 228 W-RTPWRRDLPGAALAMIVWLLAAAGLRAYLAATIGSDAVFSQLAVPIAIVLWLYVSSVA 286
Query: 262 FILGAELNASM 272
+LGAELNA +
Sbjct: 287 VLLGAELNAEI 297
>gi|296106232|ref|YP_003617932.1| ribonuclease BN [Legionella pneumophila 2300/99 Alcoy]
gi|295648133|gb|ADG23980.1| ribonuclease BN [Legionella pneumophila 2300/99 Alcoy]
Length = 364
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 49/97 (50%)
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
Y+ IG F+++ +P KI G + I + F +Y++ ++TY +Y
Sbjct: 132 YSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYELLY 191
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 192 GAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 228
>gi|163739520|ref|ZP_02146930.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
gi|161387273|gb|EDQ11632.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
Length = 285
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%)
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
PG I + WV G++ F+ Y+ F +Y+ + L+ ++ L ++++ + GA L+A
Sbjct: 194 PGAILSCTLWVAGSIGFSLYVQAFGSYNETFGALSGVILLLTWMWLSAFVILFGAGLDAE 253
>gi|21233247|ref|NP_639164.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66770189|ref|YP_244951.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. 8004]
gi|21115081|gb|AAM43055.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66575521|gb|AAY50931.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. 8004]
Length = 330
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 137 LQNALNLIFRTDKQRLDGIMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 196
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 197 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVNWRQAFVGGVITSLLFALGR 245
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI + S Y + +++ LV++Y V F +GA L A
Sbjct: 246 YAIGVYIAKAAPGSA-YGSMGTLVILLVWMYYASVVFFIGALLTA 289
>gi|95928810|ref|ZP_01311556.1| ribonuclease BN, putative [Desulfuromonas acetoxidans DSM 684]
gi|95135155|gb|EAT16808.1| ribonuclease BN, putative [Desulfuromonas acetoxidans DSM 684]
Length = 437
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF---PALG 171
S N ++V E RS + F V L L +++ V + + +V ++ P G
Sbjct: 134 SFNDLWQVQETRSLFRRFADYFSVVTLGP--LFVLAAVSMNTSIRSQHVVQWLLSKPVFG 191
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ LL+++ A++ IF+++F+P K K++S L G I W++ + ++
Sbjct: 192 DALLLLFE---VLPFFAIWAAFIFLYMFVPNTKVKLVSALVGGISAGSLWLLTQWAYINF 248
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ +Y +A++ +++LY+ + +LG EL
Sbjct: 249 QYGVGKYNAIYGTMAALPIFMIWLYVSWMITLLGVEL 285
>gi|261250579|ref|ZP_05943154.1| ribonuclease BN [Vibrio orientalis CIP 102891]
gi|260939148|gb|EEX95135.1| ribonuclease BN [Vibrio orientalis CIP 102891]
Length = 305
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+GL +L +P K +I L G I + + F YI F +Y +Y LA+I
Sbjct: 189 FVGL---YLLVPNKKVRISHALIGAIVAALLFEASKKGFAAYITQFPSYQLIYGALAAIP 245
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 246 ILFVWVYLCWLIVLVGAEVTAAL 268
>gi|158316017|ref|YP_001508525.1| putative ribonuclease BN [Frankia sp. EAN1pec]
gi|158111422|gb|ABW13619.1| putative ribonuclease BN [Frankia sp. EAN1pec]
Length = 420
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 186 MLALFIGLIFVHLFLPAAKSKIMS---ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L LF+ ++ L+ +++ + PG + + W+ + F Y+ F +Y+ Y
Sbjct: 273 VLVLFVVVMIALLYWSTPNARVRGFRWMTPGSLLAVLIWLAASAAFAFYVSNFGSYNKTY 332
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
LA ++ LV+L++ + +LG E + +
Sbjct: 333 GALAGVIVFLVWLWLSNLAILLGLEFDTEI 362
>gi|298293294|ref|YP_003695233.1| ribonuclease BN [Starkeya novella DSM 506]
gi|296929805|gb|ADH90614.1| ribonuclease BN [Starkeya novella DSM 506]
Length = 375
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
W+ +V F+ Y+ F++Y Y L +++ +V++++ +LGAELNA +
Sbjct: 293 WLATSVGFSWYVSRFASYEQTYGSLGAVVGFMVWIWLSVTVVLLGAELNAEI 344
>gi|289581131|ref|YP_003479597.1| ribonuclease BN [Natrialba magadii ATCC 43099]
gi|289530684|gb|ADD05035.1| ribonuclease BN [Natrialba magadii ATCC 43099]
Length = 484
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGA----HQFVPTVIDVVFGAWPEVIAKPITDEI 82
+++ ++ +S+ P ++ +A +G +Q DV+ A EV+A+ I D+
Sbjct: 27 LSAGVAFYGFISLVPLMLLALGIAASIGGDALVNQLTAGAGDVLTPAAQEVLAETIVDDT 86
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT--------RLI 134
+ A + AL + +S + L + + Y +S T I
Sbjct: 87 GRQSAT------VVGALGLLWGASRVLRGLDRAFSEVYGTAGSKSLLDTFWDAMVVFLAI 140
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
S G L+ + LVI FV + VR A+G L + +LALF+ +
Sbjct: 141 SAGLALVGGLELVIQ---FVPV------VR----AIGPLFI----------LLALFVMFL 177
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+++ P +PG + + W+ + F+ Y + Y+ +Y L ++ L++
Sbjct: 178 PLYIVFPGKDVGFREAIPGALLAAVGWLALSRAFSLYANVATGYA-LYGALGAVFLVLIW 236
Query: 255 LYMLGVFFILGAELNA 270
LY + I GA NA
Sbjct: 237 LYAGAIILIFGAICNA 252
>gi|13488528|ref|NP_109535.1| BrkB (serum resistance)-like protein [Mesorhizobium loti
MAFF303099]
gi|14028282|dbj|BAB54874.1| BrkB (serum resistance) homolog [Mesorhizobium loti MAFF303099]
Length = 384
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 123/284 (43%), Gaps = 14/284 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F V+++ +A+ FV++D + + ++ A S+ P ++ +AG H +
Sbjct: 49 FKDVWNVAREAVVGFVDDDALSHGAAMAFYATTSLAPVLLIVVAIAGLAFGHDAAQLALS 108
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGV-EALRISLNRAY 120
+ I ++IL+ AK T++A+ + +++GV ++ SLN+ +
Sbjct: 109 AQISGLMGAGSAGILEDILK--GASAKSSGTVAAILGTVTLFITASGVFGEMQQSLNKIW 166
Query: 121 RVVEMRSWYITRLISFGYVLLASV-TLVIMSFVFVAIPLALAYVRKFFPA---LGNLLLI 176
+ VE I+RL+ V L V L M V + A++ + F A G ++L
Sbjct: 167 K-VEPNGGSISRLVRARAVSLGLVAALGFMLLVSLVASAAISTLGDFISARLPFGTIVLS 225
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ N + +++ I+ LP K + G + T + +G L Y+ T S
Sbjct: 226 VINTFVSFVLISAMFAAIYK--VLPDRTLKWRDVAIGALVTAALFTIGKSLIGWYLGT-S 282
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ Y ++ L+++Y F+LGAE + I + +
Sbjct: 283 AVASSYGAAGGLLVILLWVYYSSEIFLLGAEFTRAFSIRHGSRS 326
>gi|188574977|ref|YP_001911906.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188519429|gb|ACD57374.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 320
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 122 LQNALNLIFRTDKERLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 181
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 182 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGR 230
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 231 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 274
>gi|295835521|ref|ZP_06822454.1| membrane protein [Streptomyces sp. SPB74]
gi|197698571|gb|EDY45504.1| membrane protein [Streptomyces sp. SPB74]
Length = 299
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
LPG + + W++ FT Y TYS +Y LA I+ L++L++ + + GA+ A
Sbjct: 212 LPGGVLATVLWLLATAGFTLYTSLIGTYSALYGSLAGIVVFLIWLWLSNLALLAGAQFAA 271
Query: 271 SM 272
+
Sbjct: 272 EL 273
>gi|297156417|gb|ADI06129.1| putative integral membrane protein [Streptomyces bingchenggensis
BCW-1]
Length = 439
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 16/147 (10%)
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPL---ALAYVRKFFPALGNLLLIIWNGRIYATML 187
TRL+SF LL V L+I + VA+PL V PA G+L+ +++ + ++
Sbjct: 133 TRLLSF---LLYLVALIIGA---VALPLMVIGPEAVVHLVPASGDLVRVLY----WPVVI 182
Query: 188 ALFIGLIFV--HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + H+ +P +S +PG + WV+G+VL Y+V T+Y L
Sbjct: 183 LLSVAFLTTLYHVSVPV-RSPWREDIPGALVALAIWVLGSVLLRIYLVHTVEGPTIYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
A+ + L+++ + ++GA +NA++
Sbjct: 242 AAPVAVLLWIGVSAFAVLVGAAVNAAI 268
>gi|288940217|ref|YP_003442457.1| ribonuclease BN [Allochromatium vinosum DSM 180]
gi|288895589|gb|ADC61425.1| ribonuclease BN [Allochromatium vinosum DSM 180]
Length = 439
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 48/88 (54%)
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R+ A L + F++ F+P + +++S L G + + W LF H++ + Y+
Sbjct: 204 RLVAPYLMISATFAFIYRFVPNTQVRLVSALIGGLVAGLLWQSVGALFAHFMAGSTQYTA 263
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y+ LA ++ ++++Y+ + ++G+ L
Sbjct: 264 IYSSLAILILLMIWIYLGWLILLVGSSL 291
>gi|322436384|ref|YP_004218596.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
gi|321164111|gb|ADW69816.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
Length = 305
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 42/281 (14%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++DA+ H D + + SA++S+FP ++ A + L + + + F
Sbjct: 26 LFDALAH----DCLNLGQSAAYSAMVSLFPAMIVTAAIIALLPDTAPLRSQVGDFFD--- 78
Query: 72 EVIAKPITDEILQVL-----AVPAKGLFTISALAAAYF-----SSNGVEALRISLNRA-- 119
+ + ++L +L A P TI AL A F +S+ + L + RA
Sbjct: 79 ----QVLPADVLPLLTSYFVASPGASPHTIRALILAAFVSFTGASSVIATLMEGIARANG 134
Query: 120 -------YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALG 171
+ MR++ + IS ++LA++ +V F + + L LA ++R F A+
Sbjct: 135 LPRDCWTFGQRRMRAFLLVP-ISLIPLVLATILVVFGQFFSIWLALHLAPFIRPTFYAIA 193
Query: 172 NLLLIIWNGRIYATMLALFIGL--IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
L + W LA +GL + HL P K LPG I W V + F
Sbjct: 194 --LAVRW-----IVSLAGVVGLTALIYHLGTPL-KQHWRRTLPGAIAATAIWFVSTLAFG 245
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y+ F+ Y +Y L + + L +LY++ + ++GAE N+
Sbjct: 246 WYVTRFANYGQVYGSLGAGIALLFWLYIVFLSVLVGAEFNS 286
>gi|253989336|ref|YP_003040692.1| proton/sodium-glutamate symport protein [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253780786|emb|CAQ83948.1| similar to proton/sodium-glutamate symport protein [Photorhabdus
asymbiotica]
Length = 463
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E SW+ ++ GYV L + +VIM VF +I A+A + K +LG + +
Sbjct: 58 VKESISWF--NIVGNGYVQL--LQMVIMPLVFASILSAVARLHKA-SSLGKISFLTIGTL 112
Query: 182 IYATMLALFIGLIFVHLF 199
++ TM+A FIG+I +LF
Sbjct: 113 LFTTMIAAFIGIIITNLF 130
>gi|166710400|ref|ZP_02241607.1| ribonuclease BN [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 320
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 122 LQNALNLIFRTDKERLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 181
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 182 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGR 230
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 231 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 274
>gi|223937010|ref|ZP_03628918.1| ribonuclease BN [bacterium Ellin514]
gi|223894291|gb|EEF60744.1| ribonuclease BN [bacterium Ellin514]
Length = 345
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 128/301 (42%), Gaps = 41/301 (13%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M V+ ++ ++ +F+ ++ + + +S +L++ P V +AG + H
Sbjct: 1 MASTLKAVWGLLKQSVNNFINDNAQRLGAALSYYTVLALPPLFVILFFVAGLVLRHH--- 57
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL--FTISALA--AAYFSSNGV-EALRIS 115
V VF +I K + I ++A P + F SA+A A +S G+ L+ +
Sbjct: 58 DVQKDVFNQVGGLIGKQGGEAIKSIMANPQQQQKGFVASAIAIGALLVTSTGLFLELQNA 117
Query: 116 LNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL 170
LN + V E +T RL+SFG +++ L+ V + + AL + K+F L
Sbjct: 118 LNSIWGVREKPGQGVTGFIKNRLLSFGMIVIIGFLLL----VSMVVSTALTALNKYFAGL 173
Query: 171 GNLLLIIWNGRIYATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
L I+W +I +++ I ++F LF +LP V W +GA + T
Sbjct: 174 VPDLHILW--QILNVVVSFGVITVLFAMLF---------KVLPDVKIAWKDVWIGAAI-T 221
Query: 230 HYIVTF-----------STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ T S ++ Y S++ L+++Y GAE+ + +
Sbjct: 222 AFLFTLGKFGLGLYLGKSATASAYGAAGSLVIILLWVYYSAQILFFGAEVTQAYACRFGE 281
Query: 279 K 279
K
Sbjct: 282 K 282
>gi|257069185|ref|YP_003155440.1| hypothetical protein Bfae_20430 [Brachybacterium faecium DSM 4810]
gi|256560003|gb|ACU85850.1| predicted membrane protein [Brachybacterium faecium DSM 4810]
Length = 388
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
I PG +F + V AV + Y+ T + YS+ Y + IM L L+++ + I+GAE++
Sbjct: 245 ISPGGVFAILGIAVAAVALSIYMGTVAGYSS-YGAIGGIMAVLFALWVVNIVIIMGAEVD 303
Query: 270 AS 271
A
Sbjct: 304 AE 305
>gi|86606321|ref|YP_475084.1| YihY family protein [Synechococcus sp. JA-3-3Ab]
gi|86554863|gb|ABC99821.1| YihY family protein [Synechococcus sp. JA-3-3Ab]
Length = 324
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 118/269 (43%), Gaps = 32/269 (11%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
+AS ++ S++L++FPFI L G FV + + F E + + E L +
Sbjct: 36 GLASEMAYSSMLALFPFI-----LTLLTGIGLFVGSS-EQAFQRLMEQLGQIAPQEALVL 89
Query: 86 LAVPA--------KGLFTISALAAAYFSSNGVEALRISLNRAYRVVE--MRSWYITRLIS 135
L A +GL ++S L + +S + A+ +L+ ++ + + R ++ +LIS
Sbjct: 90 LERYARELRFGENRGLLSLSFLGTLWAASGALGAVMTALDLSHEIPQEMRRPFWRRKLIS 149
Query: 136 FGYVL--LASVTLVIMSFVFVA------------IPLALAYVRKFFPALGNLLLIIWNGR 181
++L L L + F+F A + +A + P L L +W
Sbjct: 150 MVWMLATLGLTGLASLIFLFSASFFRFLSAQAKSLAEGVAGPDQLDP-WRELALKLWEAL 208
Query: 182 IYATMLALFIGLIFV-HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L + + +V + F P+ + M I PG I + WV + Y+ F +
Sbjct: 209 TWPISLGMIVVSCWVLYRFGPSLRRPQMPIWPGAIVASLLWVGVSWGLRVYVEHFGQLNQ 268
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELN 269
+Y + +++ L+++++ + + G ++N
Sbjct: 269 VYGAVGAVIVLLLWVWLTSLALLFGDQIN 297
>gi|58583750|ref|YP_202766.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58428344|gb|AAW77381.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 338
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 140 LQNALNLIFRTDKERLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 199
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 200 LPAVG-----------YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGR 248
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI T + S Y + +++ LV++Y V F +GA + A
Sbjct: 249 YAIGVYIATAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITA 292
>gi|116491549|ref|YP_811093.1| ribonuclease BN-like family protein [Oenococcus oeni PSU-1]
gi|290891155|ref|ZP_06554217.1| hypothetical protein AWRIB429_1607 [Oenococcus oeni AWRIB429]
gi|116092274|gb|ABJ57428.1| Ribonuclease BN-like family enzyme [Oenococcus oeni PSU-1]
gi|290479119|gb|EFD87781.1| hypothetical protein AWRIB429_1607 [Oenococcus oeni AWRIB429]
Length = 282
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF LI ++ F+P AK K + G +FT + W++ A F Y+ F+ + Y +
Sbjct: 186 LVGLFSLLILIYYFVPQAKIKWRYVWIGAVFTSLGWLLLAQGFQLYVEYFAQRVSSYQTI 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
S + + +L ++G +NAS Y+
Sbjct: 246 GSFILLMFWLNFSSSIILIGGVINASCQNYF 276
>gi|313202033|ref|YP_004040691.1| cyclic nucleotide-binding protein [Methylovorus sp. MP688]
gi|312441349|gb|ADQ85455.1| cyclic nucleotide-binding protein [Methylovorus sp. MP688]
Length = 426
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
++++ F+F + L L V FF +I N + + ++ + IF +F PA S
Sbjct: 166 ILLLFFIFTLMGLGLEKVIDFFNPSATHTKLIDN--VSSIVICTVLIAIFYRIFFPARIS 223
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ +IL G T I W+ F ++ +Y T++ G+ ++ + +LY F+LG
Sbjct: 224 -LKNILIGSTITGIMWIAMRPAFGLFLSLNQSYDTVFGGMKNMFISIGWLYYTFAVFLLG 282
Query: 266 AEL 268
EL
Sbjct: 283 TEL 285
>gi|254507312|ref|ZP_05119448.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus 16]
gi|219549772|gb|EED26761.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus 16]
Length = 306
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+GL +L +P K I L G + I + F YI F +Y +Y LA+I
Sbjct: 189 FVGL---YLLVPNKKVHISHALIGAVVAAILFEASKKGFAAYITQFPSYQLIYGALAAIP 245
Query: 250 TCLVFLYMLGVFFILGAELNASM-IIYYWRK 279
V++Y+ + ++GAE+ A++ +W K
Sbjct: 246 ILFVWVYLCWLIVLVGAEVTAALGEKEHWSK 276
>gi|116629359|ref|YP_814531.1| ribonuclease BN-like family protein [Lactobacillus gasseri ATCC
33323]
gi|238853046|ref|ZP_04643439.1| YihY family protein [Lactobacillus gasseri 202-4]
gi|311110986|ref|ZP_07712383.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116094941|gb|ABJ60093.1| Ribonuclease BN-like family enzyme [Lactobacillus gasseri ATCC
33323]
gi|238834344|gb|EEQ26588.1| YihY family protein [Lactobacillus gasseri 202-4]
gi|311066140|gb|EFQ46480.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 307
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 113/249 (45%), Gaps = 22/249 (8%)
Query: 36 LLSVFPFIVFGAN-LAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
LLS+FP I+ N L F + + ++++F + + PI + +L+ + G
Sbjct: 40 LLSIFPIIIIIGNVLPLFSIDTKPIARYLELIFPSQVSSLIMPIINALLKK---HSSGFI 96
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEM---RSWY---ITRLISFGY--VLLASVTL 146
++ + A + S V ++R++ N+ Y V + +SW+ + R +F +L+A ++
Sbjct: 97 SLGIVIAIWSLSCLVNSVRLAANKIYGVDKKEKGKSWWNYLLARTFTFALSVILVAGFSI 156
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLL----IIWNGRIYATMLALFIGLIFVHLFLPA 202
+I F F + +F + NL L + N R +L I ++++ +P
Sbjct: 157 IIFVFTFGR------QIMEFLAPIFNLSLWWVYKLENYRWPIIILMTVIINLYINYVIPN 210
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ + PGV FT SW + F Y+ F T Y + S + +++L +
Sbjct: 211 ISVQKRVVWPGVCFTVASWGALSYFFGLYLRQFGTRWQNYGIVGSFIIFMLWLNIGSFLL 270
Query: 263 ILGAELNAS 271
+LG +NA+
Sbjct: 271 LLGICINAT 279
>gi|254000056|ref|YP_003052119.1| cyclic nucleotide-binding protein [Methylovorus sp. SIP3-4]
gi|253986735|gb|ACT51592.1| cyclic nucleotide-binding protein [Methylovorus sp. SIP3-4]
Length = 426
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 7/158 (4%)
Query: 111 ALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL 170
ALR + + +VE S +I R I ++ + ++++ F+F + L L V FF
Sbjct: 135 ALRSAFHTIAAMVEEPS-FIKRKIK---DVIGVLGILLLFFIFTLMGLGLEKVIDFFNPS 190
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+I N + + ++ + IF +F PA S + +IL G T I W+ F
Sbjct: 191 ATHTKLIDN--VSSIVICTVLIAIFYRIFFPARIS-LKNILIGSAITGIMWIAMRPAFGL 247
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ +Y T++ G+ ++ + +LY F+LG EL
Sbjct: 248 FLSLNQSYDTVFGGMKNMFISIGWLYYTFAVFLLGTEL 285
>gi|251793486|ref|YP_003008215.1| ribonuclease BN [Aggregatibacter aphrophilus NJ8700]
gi|288559226|sp|C6AQL9|Y1801_AGGAN RecName: Full=UPF0761 membrane protein NT05HA_1801
gi|247534882|gb|ACS98128.1| tRNA-processing ribonuclease BN (RNase BN) [Aggregatibacter
aphrophilus NJ8700]
Length = 278
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+++ +P K I G + + + +G F YIVTF +Y +Y +A++ L+++
Sbjct: 184 IYMVVPNKKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQLIYGAMATLPIMLLWI 243
Query: 256 YMLGVFFILGAELNA 270
+ F +LGA+L A
Sbjct: 244 QLSWTFVLLGAQLAA 258
>gi|261867366|ref|YP_003255288.1| ribonuclease BN [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412698|gb|ACX82069.1| tRNA-processing ribonuclease BN (RNase BN) [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 276
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+++ +P K I G + + + +G F YIVTF +Y +Y +A++ L+++
Sbjct: 184 IYMVVPNKKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQLIYGAMATLPIMLLWI 243
Query: 256 YMLGVFFILGAELNASMIIYYWRKK 280
+ F +LGA+L A + +K+
Sbjct: 244 QLSWTFVLLGAQLAAVLAEVQSKKQ 268
>gi|282864766|ref|ZP_06273820.1| ribonuclease BN [Streptomyces sp. ACTE]
gi|282560191|gb|EFB65739.1| ribonuclease BN [Streptomyces sp. ACTE]
Length = 399
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
TRL++F LL V LV+ S V + + V +F P LL +++ + ++ L
Sbjct: 162 TRLLAF---LLYVVALVLGSVVLPLLVVGPDRVVEFVPWGTELLAVLY----WPLVIVLS 214
Query: 191 IGLIFV--HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I + H+ +P +S M +PG + WV+G+ L Y+ + T+Y LA+
Sbjct: 215 IAFLTTLYHVSVPV-RSPWMEDVPGALVALAMWVLGSFLLRIYLTSTVEGPTIYGSLAAP 273
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ L+++ + ++GA +NA++
Sbjct: 274 IAVLLWIGISAFAVLVGAAVNAAI 297
>gi|258620385|ref|ZP_05715423.1| tRNA processing ribonuclease BN [Vibrio mimicus VM573]
gi|262170328|ref|ZP_06038006.1| ribonuclease BN [Vibrio mimicus MB-451]
gi|258587264|gb|EEW11975.1| tRNA processing ribonuclease BN [Vibrio mimicus VM573]
gi|261891404|gb|EEY37390.1| ribonuclease BN [Vibrio mimicus MB-451]
Length = 309
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 43/83 (51%)
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + ++L +P K ++ + G + + + + F YI F +Y +Y LA+I
Sbjct: 191 FCAFVGLYLLVPNKKVRLPHAMAGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIP 250
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 251 ILFVWVYLCWLIVLVGAEVTAAL 273
>gi|319424695|gb|ADV52769.1| ribonuclease BN [Shewanella putrefaciens 200]
Length = 294
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 36/182 (19%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ SLN +R E RS + +I+ G VL+ + +LV S+V
Sbjct: 118 ISAIDKSLNNIWRTKEKRSVVVAFSMYWMVITLGPVLVGA-SLVATSYV----------- 165
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFI----------GLIFVHLFLPAAKSKIMSILPG 213
+ L ++ ++ ++ LFI + +++ +P K K + L G
Sbjct: 166 ---------VSLKLFEDETFSGVVPLFIERLPMLFSVAAFLLLYMVVPNQKVKFLHALLG 216
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + +G F Y+ F +Y +Y LA+I V++Y+ + +LGAE+ A+M
Sbjct: 217 ALVAALLFELGKKAFALYVTQFPSYEAIYGALATIPILFVWVYLSWMIVLLGAEITAAMP 276
Query: 274 IY 275
Y
Sbjct: 277 EY 278
>gi|312882854|ref|ZP_07742586.1| ribonuclease BN [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369373|gb|EFP96893.1| ribonuclease BN [Vibrio caribbenthicus ATCC BAA-2122]
Length = 304
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 30/247 (12%)
Query: 33 LSALLSVFP-FIVF---GANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAV 88
L+ LLSV F VF G + F+ H FVP D V A E ++ ++ AV
Sbjct: 45 LTVLLSVLSSFSVFQNTGDAIQDFVITH-FVPAAGDAVKSALYEFVSNTG-----KMSAV 98
Query: 89 PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY---VLLASVT 145
LF ++ + + N LN +RV E R + SF +L
Sbjct: 99 GGGFLFAVALMLISNIDKN--------LNYIWRVTEKRR----AVFSFSMYWMILTLGPI 146
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
LV MS V + +L + +L L++ W I + A F+GL +L +P +
Sbjct: 147 LVGMSIVMSSYLTSLKLINNEALSLLYELILRWLPFILS--FAAFVGL---YLLVPNKRV 201
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
K+ + G + + + + F YI F +Y +Y LA+I +++Y+ + ++G
Sbjct: 202 KLSHAVIGGVIAALLFEMSKKAFALYITQFPSYQLIYGALAAIPILFIWVYLCWLIVLVG 261
Query: 266 AELNASM 272
AE+ A++
Sbjct: 262 AEITAAL 268
>gi|120435843|ref|YP_861529.1| ribonuclease BN-like family protein [Gramella forsetii KT0803]
gi|117577993|emb|CAL66462.1| ribonuclease BN-like family protein [Gramella forsetii KT0803]
Length = 336
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 116/255 (45%), Gaps = 13/255 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ + +A ++ I+ AL S+ ++ ++AG+ + V I + + A +
Sbjct: 21 KNEPYARSATIAYYALFSLPSLLIIVVSIAGYFYGREAVQGRITGQIVDFIGLDAATAIE 80
Query: 81 EILQVLAVPAKGLFTIS-ALAAAYFSSNGVE-ALRISLNRAYRVVEMRSWY----ITRLI 134
+++ A+ + ++ A F + GV L++++N + V ++ + + R+I
Sbjct: 81 NMIESAALSQDSILAVAFGFAMLIFGATGVFFQLKVAMNNIWNVAARKTNFFKMVVDRMI 140
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
S G + + + L+I V + + V + FP + + I N + + LFI +
Sbjct: 141 SLGMIFVIGLLLLITLVVSTLLQIIADEVGELFPNITESAVDISN----SVLSFLFITTL 196
Query: 195 FVHLF--LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
F +F LP + K+ + G T I +++G L + Y S +++Y +S++ L
Sbjct: 197 FALIFKLLPDIRIKLKTTYTGAALTAILFLIGKFLISFYFGQ-SEPASVYGAASSVVLIL 255
Query: 253 VFLYMLGVFFILGAE 267
+++Y + GAE
Sbjct: 256 LWVYYTCLILFFGAE 270
>gi|293390889|ref|ZP_06635223.1| ribonuclease BN [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951423|gb|EFE01542.1| ribonuclease BN [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 122
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+++ +P K I G + + + +G F YIVTF +Y +Y +A++ L+++
Sbjct: 30 IYMAVPNKKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQLIYGAMATLPIMLLWI 89
Query: 256 YMLGVFFILGAELNA 270
+ F +LGA+L A
Sbjct: 90 QLSWTFVLLGAQLAA 104
>gi|258624619|ref|ZP_05719555.1| tRNA processing ribonuclease BN [Vibrio mimicus VM603]
gi|262166747|ref|ZP_06034484.1| ribonuclease BN [Vibrio mimicus VM223]
gi|258583083|gb|EEW07896.1| tRNA processing ribonuclease BN [Vibrio mimicus VM603]
gi|262026463|gb|EEY45131.1| ribonuclease BN [Vibrio mimicus VM223]
Length = 309
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 43/83 (51%)
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + ++L +P K ++ + G + + + + F YI F +Y +Y LA+I
Sbjct: 191 FCAFVGLYLLVPNKKVRLPHAMAGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIP 250
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 251 ILFVWVYLCWLIVLVGAEVTAAL 273
>gi|90414677|ref|ZP_01222648.1| ribonuclease BN [Photobacterium profundum 3TCK]
gi|90324219|gb|EAS40794.1| ribonuclease BN [Photobacterium profundum 3TCK]
Length = 321
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 179 NGRIYATMLAL--------FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
NG T+ AL F+GL +L +P K K L G + I + + F
Sbjct: 181 NGLFQQTLRALPVIMSSCAFLGL---YLLVPNLKVKFSHALFGALVASILFELSKKGFAL 237
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
YI F +Y +Y LA I V++Y+ +LGAE+ AS+
Sbjct: 238 YISNFPSYQVIYGALAVIPILFVWVYLCWCIVLLGAEITASL 279
>gi|322368510|ref|ZP_08043078.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
gi|320551794|gb|EFW93440.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
Length = 347
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 189 LFIGLIFVHLF--LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST-MYAGL 245
L +G+ F+ ++ P +I ILPGV + W V +F H S Y+T +Y +
Sbjct: 154 LVLGIAFLPMYYVFPNIDVEIGEILPGVAIAAVGWQVLHSVF-HMYAQVSAYNTSLYGTV 212
Query: 246 ASIMTCLVFLYMLGVFFILGAELNA 270
I+ +V+LY+ + + GA +NA
Sbjct: 213 GKILLVIVWLYVGSIVILFGAAVNA 237
>gi|261211303|ref|ZP_05925592.1| ribonuclease BN [Vibrio sp. RC341]
gi|260839804|gb|EEX66415.1| ribonuclease BN [Vibrio sp. RC341]
Length = 309
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+GL +L +P K + + G + + + + F YI F +Y +Y LA+I
Sbjct: 194 FVGL---YLLVPNKKVHLQHAMTGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIP 250
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 251 ILFVWVYLCWLIVLVGAEVTAAL 273
>gi|194291492|ref|YP_002007399.1| ribonuclease; ribonuclease bn family [Cupriavidus taiwanensis LMG
19424]
gi|193225396|emb|CAQ71342.1| putative ribonuclease; ribonuclease BN family [Cupriavidus
taiwanensis LMG 19424]
Length = 301
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 120 YRV-VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV + R + ++ L+ + Y+ + S+ L++++ V A+ LA + LG+ W
Sbjct: 128 HRVAIRRRHFLVSALLPYCYIAVLSIGLLLVTVVSGAL---LAIGERHVEVLGH----DW 180
Query: 179 N-GRIYATMLAL--FIG----LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ R+ +L L FIG L +++ +P + + L G + + W + + Y
Sbjct: 181 SLDRLSTGLLYLLGFIGEVLMLTSIYMVMPVGRLSLRHALSGAVIAAVLWEISRHVLVWY 240
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
T S +Y L + + L+ L + +LGA++ A W K P
Sbjct: 241 FTTLSQVGRVYGSLTTAIVVLLSLEIAATLLLLGAQVIAEFERGAWHKLP 290
>gi|296128677|ref|YP_003635927.1| ribonuclease BN [Cellulomonas flavigena DSM 20109]
gi|296020492|gb|ADG73728.1| ribonuclease BN [Cellulomonas flavigena DSM 20109]
Length = 359
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 107/223 (47%), Gaps = 10/223 (4%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRI 114
+ V +V+D+ GA + + ++ VPA G ++ L A +S++G V A
Sbjct: 89 EEVVESVVDLAAGAGAGDQVDGVRPVLERLTEVPAAGFALVAGLVVALWSASGYVAAFSR 148
Query: 115 SLNRAYRVVEMRS-WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+NR Y V E R W + ++ +L + +++++ + ++ P+A + L +
Sbjct: 149 GMNRIYEVDEGRPIWKLRPVLLLLTAVLVVIAVLVVALLVLSGPVAESVGGAV--GLSSA 206
Query: 174 LLIIWN-GRIYATMLALFIGLIFVHLFLPAAKS---KIMSILPGVIFTWISWVVGAVLFT 229
+ +W + +L + + + ++ P + + +SI G + + WV+ V F
Sbjct: 207 AVTVWQVAKWPVVLLLVVVAVALLYHGTPNVRQPRFRWLSI--GAVVAIVVWVLATVGFG 264
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ FS+Y Y LA I+ L++L++ + + GAEL+A +
Sbjct: 265 LYVANFSSYDETYGSLAGIVVLLLWLWLTNLALLFGAELDAEL 307
>gi|56461547|ref|YP_156828.1| ribonuclease BN [Idiomarina loihiensis L2TR]
gi|67460627|sp|Q5QV33|Y2447_IDILO RecName: Full=UPF0761 membrane protein IL2447
gi|56180557|gb|AAV83279.1| Ribonuclease BN [Idiomarina loihiensis L2TR]
Length = 284
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 16/176 (9%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ +LN +R R W ++ L++ G VL+ S L S++ A YV
Sbjct: 114 MSAIDKALNSIWRDSSSRHWLVSFAVYWMLLTLGPVLIGS-GLAATSYLMSLSQFADEYV 172
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
G ++W + ++ F+ + ++ +P + K G + + + +
Sbjct: 173 S------GIQSFVLW----FVPIVTSFVFFVLMYQLVPNRQVKFRYAAFGAVIAALLFEL 222
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LF+ YI F TY +Y LA+I +V++Y+ + ++GA L S+ Y ++
Sbjct: 223 SKQLFSLYITFFPTYQAIYGALATIPILIVWIYLSWLIVLIGAVLTVSLEEYQLQQ 278
>gi|111223692|ref|YP_714486.1| hypothetical protein FRAAL4293 [Frankia alni ACN14a]
gi|111151224|emb|CAJ62935.1| conserved hypothetical protein; putative membrane protein; putative
Ribonuclease BN domain [Frankia alni ACN14a]
Length = 366
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 192 GLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL-ASIM 249
GL+ V + A+S ++ I PG +F + W + L ++YI ST GL ++
Sbjct: 192 GLVLVAFKVLTARSVRVREIAPGAVFAALGWQLVQTLGSYYIAHQLKGSTQVYGLFGLVL 251
Query: 250 TCLVFLYMLGVFFILGAELNA 270
+ +LY L V +L E+NA
Sbjct: 252 GLMTWLYFLAVVVVLAMEINA 272
>gi|237746063|ref|ZP_04576543.1| ribonuclease BN transmembrane protein [Oxalobacter formigenes
HOxBLS]
gi|229377414|gb|EEO27505.1| ribonuclease BN transmembrane protein [Oxalobacter formigenes
HOxBLS]
Length = 433
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 21/258 (8%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF--VPTVIDVVF--GAWPE 72
E E + +A +IS + +LS+ P + LA F +F + ++ F G P+
Sbjct: 35 ERLKENNLTDVAGNISFTVILSLVPMLAIV--LAVFTTFPEFGTLQDTLETYFAQGMIPD 92
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
IA+ I + L A A + + LA + + + + + + +R + ++ R +
Sbjct: 93 NIARTILN-YLGEFASNAANVSIVGGLALLFTTLSTISTIESAFDRIWHIMNPRPLWKRV 151
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN----LLLIIWNGRIYATMLA 188
++ +LA V L I ++ + L+ + + P L L+ IIW
Sbjct: 152 ILYIAIAVLAPVLLGISIYLTSHLVLSEHGLIGWLPFLNGVSAPLIAIIWTA-------- 203
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I ++ LP G +F+ +S+ + LF +IV FS+Y +Y LA+
Sbjct: 204 --IAFTLLYRILPNRLVLWKDAAAGGLFSAVSFEIAIRLFAFFIVNFSSYERIYGALAAF 261
Query: 249 MTCLVFLYMLGVFFILGA 266
+++LY+ + +LGA
Sbjct: 262 PIFMMWLYISSLIMLLGA 279
>gi|325920512|ref|ZP_08182437.1| putative membrane protein [Xanthomonas gardneri ATCC 19865]
gi|325548995|gb|EGD19924.1| putative membrane protein [Xanthomonas gardneri ATCC 19865]
Length = 315
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 112 LRISLNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
L+ +LN +R + R +W R+ SFG +L L++ A+ + A +
Sbjct: 122 LQNALNLIFRTDKERLEGVVAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSV 181
Query: 167 FPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
PA+G Y T LAL+ + F++ +LP G + T + + +G
Sbjct: 182 LPAIG-----------YVTTLALYSLAFAFLYRYLPDRTVNWRQAFVGGVITALLFALGR 230
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
YI + S Y + +++ LV++Y V F +GA L A
Sbjct: 231 YGIGLYIAKAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALLTA 274
>gi|296537248|ref|ZP_06899146.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
gi|296262424|gb|EFH09151.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
Length = 311
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 117/268 (43%), Gaps = 21/268 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+I + F+E+D + + I+ + S+ P ++ +AG + I G
Sbjct: 7 LIRQTVLGFIEDDALSRGAAIAFYTVTSLAPVLIIAIAIAGSVFGEDAARGAIVEQLGGL 66
Query: 71 PEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGV-EALRISLNRAYR------- 121
+ I+ + P GL ++ +A +++GV ++ SLN+ +R
Sbjct: 67 MGAAGAELVQSIIVSASNPTSGLLASVFGIATLLLTASGVFGEIQASLNQIWRAEPRTSV 126
Query: 122 --VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+++ R+ + + + G++LL S+ ++S A+ AL PA+ L + + N
Sbjct: 127 SRLLQARAASLGLVATLGFLLLVSL---VVSAALTALGQAL---DGHLPAVA-LAVRLAN 179
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I ++AL I+ LP K + ++ G I T + + +G L Y+ + S
Sbjct: 180 VVISFALVALLFAAIYK--ILPDRKLEWRDVMVGAIATTLLFNLGKTLIGLYLGS-SAIG 236
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAE 267
T Y S + L+++Y F+LGAE
Sbjct: 237 TTYGAAGSAVIVLLWIYYSAQIFLLGAE 264
>gi|55378716|ref|YP_136566.1| ribonuclease BN [Haloarcula marismortui ATCC 43049]
gi|55231441|gb|AAV46860.1| ribonuclease BN [Haloarcula marismortui ATCC 43049]
Length = 252
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 21/138 (15%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-GNLLLIIWNGRIYATMLALFIGLI 194
G V+ S T V +++V +P +P L GN+ A AL + +
Sbjct: 133 LGAVVFLSATSVALTYVKFQVP---------YPTLVGNV----------AAFAALGVAFV 173
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ LP K+ + + PG +F W+ V F +Y T Y+ Y L +++ +
Sbjct: 174 PIYYVLPPVKTSLTHVAPGALFAAAGWITIQVGFFYYAGTAGRYAA-YGYLGALLLFVTA 232
Query: 255 LYMLGVFFILGAELNASM 272
LY+ + +LG +NA++
Sbjct: 233 LYLAAIVLLLGVVVNATL 250
>gi|290955032|ref|YP_003486214.1| hypothetical protein SCAB_4401 [Streptomyces scabiei 87.22]
gi|260644558|emb|CBG67643.1| putative membrane protein [Streptomyces scabiei 87.22]
Length = 314
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
PA LPG + W+V + F+ Y YS +Y LA ++ LV+L++ +
Sbjct: 219 PAPARHSGRSLPGGVLAAALWLVVSAGFSSYASALGAYSRLYGSLAGVVVFLVWLWLSNL 278
Query: 261 FFILGAELNASM 272
+ GA+ A +
Sbjct: 279 ALLTGAQFAAEL 290
>gi|120597103|ref|YP_961677.1| ribonuclease BN [Shewanella sp. W3-18-1]
gi|146291525|ref|YP_001181949.1| ribonuclease BN [Shewanella putrefaciens CN-32]
gi|166199585|sp|A4Y2G7|Y418_SHEPC RecName: Full=UPF0761 membrane protein Sputcn32_0418
gi|166199587|sp|A1REM8|Y272_SHESW RecName: Full=UPF0761 membrane protein Sputw3181_0272
gi|120557196|gb|ABM23123.1| tRNA-processing RNAse BN [Shewanella sp. W3-18-1]
gi|145563215|gb|ABP74150.1| tRNA-processing RNAse BN [Shewanella putrefaciens CN-32]
Length = 294
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 36/182 (19%)
Query: 109 VEALRISLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ A+ SLN +R E RS + +I+ G VL+ + +LV S+V
Sbjct: 118 ISAIDKSLNNIWRTKEKRSVVVAFSMYWMVITLGPVLVGA-SLVATSYV----------- 165
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFI----------GLIFVHLFLPAAKSKIMSILPG 213
+ L ++ ++ ++ LFI + +++ +P K K + L G
Sbjct: 166 ---------VSLKLFEDDTFSGVVPLFIERLPMLFSVAAFLLLYMVVPNQKVKFLHALLG 216
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + +G F Y+ F +Y +Y LA+I V++Y+ + +LGAE+ A+M
Sbjct: 217 ALVAALLFELGKKAFALYVTQFPSYEAIYGALATIPILFVWVYLSWMIVLLGAEITAAMP 276
Query: 274 IY 275
Y
Sbjct: 277 EY 278
>gi|241896654|ref|ZP_04783950.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
gi|241870135|gb|EER73886.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
Length = 311
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 10/245 (4%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
+S I+ LLS+FP IV L +LG + T + A PE + I I +L+
Sbjct: 42 SSSIAYFGLLSIFPAIVILGTLLPYLGLK--IDTALKYAQTAVPESVFTFIEPIIRSILS 99
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
G+ + S + + S V ++RI+ N Y V R IS +++ + L
Sbjct: 100 QNGVGVLSASIIITLWSLSRVVSSIRIAQNGIYNVQANSVAIFDRFISMFWLI---IILA 156
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
I+ + + + + + + P N++ I + + +L LFIG + LP K +I
Sbjct: 157 IIGVLLIIASVG-SNILEALPISSNIVYQIESAKRLVVILGLFIGAFLFNTLLPIKKPRI 215
Query: 208 MSILPGVI--FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ IL G I T + W+ A F Y+ + T Y L+S + L+++ + + ++G
Sbjct: 216 IWILIGTIIQITLVIWLAKA--FGWYVNIAAQAFTFYQALSSAIILLLWINFIALASLIG 273
Query: 266 AELNA 270
+ A
Sbjct: 274 TIITA 278
>gi|322389286|ref|ZP_08062846.1| ribonuclease BN [Streptococcus parasanguinis ATCC 903]
gi|321144030|gb|EFX39448.1| ribonuclease BN [Streptococcus parasanguinis ATCC 903]
Length = 323
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA-WPEVIAKPITDEILQVLAVPAKGLF 94
L+S+FP ++ AN+ + PT I + P + + + I VL P+ GL
Sbjct: 38 LISIFPLMLIAANILPYFHIR---PTQILLSLQKVLPASLYRIVAQMISSVLTKPSTGLL 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ S ++A + S + L+ + N++Y V + R RL SF
Sbjct: 95 SFSIISALWIFSQSIAYLQKAYNKSYGVEKERGIIWGRLFSF 136
>gi|312867757|ref|ZP_07727963.1| YihY family protein [Streptococcus parasanguinis F0405]
gi|311096820|gb|EFQ55058.1| YihY family protein [Streptococcus parasanguinis F0405]
Length = 323
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA-WPEVIAKPITDEILQVLAVPAKGLF 94
L+S+FP ++ AN+ + PT I + P + + + I VL P+ GL
Sbjct: 38 LISIFPLMLIAANILPYFHIR---PTQILLSLQKVLPASLYRIVAQMISSVLTKPSTGLL 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ S ++A + S + L+ + N++Y V + R RL SF
Sbjct: 95 SFSIISALWIFSQSIAYLQKAYNKSYGVEKERGIIWGRLFSF 136
>gi|296876699|ref|ZP_06900747.1| possible ribonuclease BN [Streptococcus parasanguinis ATCC 15912]
gi|296432201|gb|EFH18000.1| possible ribonuclease BN [Streptococcus parasanguinis ATCC 15912]
Length = 323
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA-WPEVIAKPITDEILQVLAVPAKGLF 94
L+S+FP ++ AN+ + PT I + P + + + I VL P+ GL
Sbjct: 38 LISIFPLMLIAANILPYFHIR---PTQILLSLQKVLPASLYRIVAQMISSVLTKPSTGLL 94
Query: 95 TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ S ++A + S + L+ + N++Y V + R RL SF
Sbjct: 95 SFSIVSALWIFSQSIAYLQRAYNKSYGVEKERGIIWGRLFSF 136
>gi|152981654|ref|YP_001355206.1| ribonuclease BN [Janthinobacterium sp. Marseille]
gi|151281731|gb|ABR90141.1| ribonuclease BN [Janthinobacterium sp. Marseille]
Length = 301
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 127/273 (46%), Gaps = 24/273 (8%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVF 67
+ + +A++ ++++ +M + ++ + S+ P ++ +AGF G + +I +
Sbjct: 10 WSLTKEAVQAWMQDFAPSMGAALAYYTIFSLAPMLIIVIAIAGFFFGQNTAQGEIIAQLR 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEM 125
G + A + + IL+ ++ P +G+ T+ L ++ L+ +LNR ++V
Sbjct: 70 GLVGDTGAAAV-EGILRSVSQPGQGIVAATLGTLTLMIGATAVFGELQSALNRIWKVTAN 128
Query: 126 RS----WY--ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ W TRL+SFG V+ L M + + + ALA + K++ ++ L W
Sbjct: 129 NNTGGVWKFVCTRLLSFGMVM----GLGFMLLISMILSAALAALGKWWGSM----LGDWT 180
Query: 180 GRIYATMLALFIGLI-----FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ LA+ G+I ++ F+P A ++ G + T + + VG L Y+
Sbjct: 181 IVLEILNLAVSFGVITTLFAMIYKFMPRATIAWRNVWFGAVITALLFTVGKFLIGLYLGK 240
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ ++ + S++ L ++Y F+LGAE
Sbjct: 241 -TNMASGFGAAGSLVVLLAWIYYSAQIFLLGAE 272
>gi|89093622|ref|ZP_01166569.1| probable ribonuclease [Oceanospirillum sp. MED92]
gi|89082018|gb|EAR61243.1| probable ribonuclease [Oceanospirillum sp. MED92]
Length = 420
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 113/264 (42%), Gaps = 16/264 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFG----ANLAGFLGAHQFVPT-VIDVVFGAWP 71
F++ G A+ ++ + L +V P + A + F G Q + V D A
Sbjct: 18 RQFLKNQGILNAAALTYTTLFAVVPLMTVSYAMLAAVPSFQGVGQELQGWVFDNFVPATG 77
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+V+ + L + A+ L + A S ++ + + NR +RV E R +
Sbjct: 78 QVV-----QDYLNEFSSQARKLTAVGVALLAVTSIMMMKNIEAAFNRIWRVTEPRKGLSS 132
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L+ + + L + L+ + V + +L ++ + +G L+ + T+L+
Sbjct: 133 FLLYWAILSLGPI-LIGLGLVLTSYIASLPFINEATEVVGRARLL----SLLPTILSA-A 186
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+++ +P + S L G + + + FT ++ F +Y +Y A++
Sbjct: 187 AFTLMYIAVPNCRVPFKSALLGGVVVALLFETAKRSFTAFVTQFPSYELIYGAFAAVPLF 246
Query: 252 LVFLYMLGVFFILGAELNASMIIY 275
L+++++ V ++GAEL +M +Y
Sbjct: 247 LLWIFISWVIILMGAELTRTMAVY 270
>gi|311695820|gb|ADP98693.1| ribonuclease BN [marine bacterium HP15]
Length = 453
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%)
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
FV++F+P + K+ G + +SW +LF ++ + Y+ +Y+ A + L++
Sbjct: 220 FVYVFMPNTRVKLRYAAIGGLVAGVSWQAAGMLFASFVAGSAKYAAIYSSFAIGIILLIW 279
Query: 255 LYMLGVFFILGAELN 269
+Y+ + +LGA +
Sbjct: 280 IYLNWMILLLGASIG 294
>gi|284166459|ref|YP_003404738.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284016114|gb|ADB62065.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 258
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
F LG+L+LI+ L I + ++ LP + S+LPG I I WV+
Sbjct: 155 FANVLGSLVLIV----------VLAIAFLPIYYVLPPMDVSVRSVLPGTIVAAIGWVLLQ 204
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ F Y Y+ Y + +++ + +LY + +LGA +NA
Sbjct: 205 IGFRIYAANAGKYAA-YGVIGAVLLFVTWLYFGSIVILLGAAVNA 248
>gi|262384858|ref|ZP_06077990.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262293574|gb|EEY81510.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 316
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 36/281 (12%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF----IVFGA----NLAGFLGAHQ 57
++F I+ D ++ F+++ +++ ++ + L S+ P I G ++AG L A Q
Sbjct: 18 SLLFKILKDMVQGFIDDSVPRLSASLAYATLFSIIPLLSLLITIGVFLKMDMAGQLYA-Q 76
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISL 116
P + V A VI + TI +LA + F + + A ++ SL
Sbjct: 77 LEPILGISVVNALNSVIENAANSN--------SSTFATIVSLAVSVFGATAIFAEIQSSL 128
Query: 117 NRAY--RVVEMRSW--YI-TRLISFGYVLL-ASVTLVIMSFVFVAIPLALAYVRKFFPAL 170
N + + + +SW Y+ RL+SF +L+ A + LV V L++ ++ + P +
Sbjct: 129 NTIWGIKAIPKKSWLKYLKNRLLSFSIILVFAFILLVTFMISNVIENLSVRFMTNY-PDV 187
Query: 171 GNLLL----IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
L+ I N + T+ AL + LP AK KI I G I T I +VG
Sbjct: 188 AESLVKVTGIFLNIIVTTTIFAL------IFKILPDAKIKIKDIFTGAIVTTILLLVGQW 241
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ YI + T+Y A + + ++Y + GAE
Sbjct: 242 GISLYI-NIANVGTVYGTAAFLAVLITWIYYSAIIIYTGAE 281
>gi|309811250|ref|ZP_07705041.1| YihY family protein [Dermacoccus sp. Ellin185]
gi|308434790|gb|EFP58631.1| YihY family protein [Dermacoccus sp. Ellin185]
Length = 389
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%)
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
LPG FT I+WV+ ++ ++ ++Y LA+ + L++LY L + ++GA LN+
Sbjct: 235 LPGAGFTLIAWVIISLFLRSWLSASVGGISIYGPLAAAIIALIWLYSLSIAVLIGAALNS 294
Query: 271 SM 272
++
Sbjct: 295 AV 296
>gi|292656690|ref|YP_003536587.1| ribonuclease BN-like protein [Haloferax volcanii DS2]
gi|291372769|gb|ADE04996.1| ribonuclease BN-like protein [Haloferax volcanii DS2]
Length = 352
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-GNLLLIIWNGRIYATMLALFIGLIF 195
G V+L +V+L ++ A A + PAL G L +++ G + A + F + +
Sbjct: 133 GIVVLVTVSLAVV---------AGALIESALPALDGALGWVVYRGLLVAVLFVTFYPMYY 183
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ P + ++PG + + LF Y V FS+ + + +A I+ L +L
Sbjct: 184 I---FPDENVTSLEVVPGTLVAAVGLTTFESLFRLY-VEFSSRTPESSVVAGILVLLTWL 239
Query: 256 YMLGVFFILGAELNA 270
Y G+ +LGA +NA
Sbjct: 240 YFSGLVILLGAAVNA 254
>gi|146308010|ref|YP_001188475.1| tRNA-processing RNAse BN [Pseudomonas mendocina ymp]
gi|166918691|sp|A4XWM7|Y2988_PSEMY RecName: Full=UPF0761 membrane protein Pmen_2988
gi|145576211|gb|ABP85743.1| tRNA-processing RNAse BN [Pseudomonas mendocina ymp]
Length = 405
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 114/293 (38%), Gaps = 61/293 (20%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFP--------------FIVFGANLAGFLGAHQFVPTV 62
+ F+E G A+ ++ + L +V P F G + GF+ + FVP+
Sbjct: 17 QRFIENRGAGNAAALTYTTLFAVVPMMTVTFAMLSAIPAFQGVGEEIQGFI-FNNFVPST 75
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAY 120
+ V E L+ A+ L F + LA F + + + N +
Sbjct: 76 GETV-------------QEYLREFTAQARQLTWFGVGLLAVTAFLM--LVTIEKTFNVIW 120
Query: 121 RVVEMRS--------WYITRLISFGYVLLAS---VTLVIMSFVFVAIPLALAYVRKFFPA 169
RV + R W I +S G +LL + V+ I S ++ P A+ +
Sbjct: 121 RVRQPRRGMSSFLLYWAI---LSLGPLLLGAGFAVSTYIASLSLISGPDAVVGAKTLL-- 175
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ +L+ ++ +P + + L G +F+ I + + LF
Sbjct: 176 ------------AFTPLLSSIAAFTLLYAAVPNTRVPLRHALLGGLFSAILFEIAKALFG 223
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM-IIYYWRKKP 281
Y+ F Y +Y A++ LV++Y+ + +LGAEL + WR++P
Sbjct: 224 LYVRLFPGYHLIYGAFATVPLFLVWIYLSWLIVLLGAELVYGLSQPRRWRRQP 276
>gi|145225446|ref|YP_001136124.1| putative ribonuclease [Mycobacterium gilvum PYR-GCK]
gi|315445799|ref|YP_004078678.1| ribonuclease [Mycobacterium sp. Spyr1]
gi|145217932|gb|ABP47336.1| putative ribonuclease [Mycobacterium gilvum PYR-GCK]
gi|315264102|gb|ADU00844.1| ribonuclease, putative [Mycobacterium sp. Spyr1]
Length = 346
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD + A E + + G A+ I+ + ++FP ++ G ++AGF+ A+Q P ++ V
Sbjct: 27 FDHVMRAQERYKDSKGDFYAAGITYFTIFALFPLLMLGFSVAGFVLANQ--PELLQDV-- 82
Query: 69 AWPEVIAKPITDEILQVL------AVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYR 121
E I + ++ Q L A+ ++G + LA A ++ G + LR +L++
Sbjct: 83 --EERIRSTFSGDLGQQLVTLMDSAIESRGAVGLIGLATAAWAGLGWMANLREALSQM-- 138
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
W + R + G+V LV + FVAI + LA ALGN L+
Sbjct: 139 ------WGLFRGETPGFVKTKLSDLVALLTTFVAIIVTLA-----LSALGNSSLV 182
>gi|88810285|ref|ZP_01125542.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
gi|88791915|gb|EAR23025.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
Length = 466
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 189 LFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L IG F++ F+P + ++ S L G + I W + +F I T S Y+ +Y+ A
Sbjct: 211 LIIGAFTFIYAFVPNTRVQVSSALVGGMVAGILWQITGWIFAAVIATSSKYTAIYSAFAG 270
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ +++LY+ + ++G+ I Y+ + P
Sbjct: 271 LILFMMWLYLSWLILLIGSN------IAYYHQHP 298
>gi|262402026|ref|ZP_06078591.1| ribonuclease BN [Vibrio sp. RC586]
gi|262351998|gb|EEZ01129.1| ribonuclease BN [Vibrio sp. RC586]
Length = 309
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+GL +L +P K + + G + + + + F YI F +Y +Y LA+I
Sbjct: 194 FVGL---YLLVPNKKVHLNHAMAGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIP 250
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 251 ILFVWVYLCWLIVLVGAEVTAAL 273
>gi|219871529|ref|YP_002475904.1| ribonuclease BN [Haemophilus parasuis SH0165]
gi|288559218|sp|B8F6K4|Y1376_HAEPS RecName: Full=UPF0761 membrane protein HAPS_1376
gi|219691733|gb|ACL32956.1| ribonuclease BN [Haemophilus parasuis SH0165]
Length = 282
Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
V+L +P + K G +F + + +G +F YI TF +Y +Y LA+I +V++
Sbjct: 186 VYLIVPNTQVKFRHAAVGALFAGVFFTLGKQIFIWYITTFPSYQAIYGALATIPIMIVWI 245
Query: 256 YMLGVFFILGAE 267
++ +LG +
Sbjct: 246 HLSWQVVLLGGQ 257
>gi|271967948|ref|YP_003342144.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270511123|gb|ACZ89401.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length = 324
Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY + E R TRL+SFG+ L + +++ V V P AL R P L+ I
Sbjct: 160 AYGLGEERGIIRTRLMSFGFYLAGLLVGLLVMPVLVLGPAAL---RGALPPDYAPLVDIL 216
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ F+ L++ H+ +P +++ LPG + +I W+ A + + + +
Sbjct: 217 YWPVVIIGSVFFLTLLY-HVSVPV-RTRWWRELPGAVLAFIIWIACAAVLRAVLAAWFSP 274
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
++Y LA+ + L++LY+ + ++GA LNA +
Sbjct: 275 VSIYGSLAAPIAVLLWLYITALAVLIGATLNAEV 308
>gi|149574853|ref|XP_001515450.1| PREDICTED: similar to solute carrier family 5 (sodium-dependent
vitamin transporter), member 6 [Ornithorhynchus
anatinus]
Length = 907
Score = 35.4 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV--IMSFVFVAIPLALAYV 163
S+ E L + N+A RV ++ +I G VL A + + F LAL V
Sbjct: 318 SSAYEYLELRFNKAVRVCGTLTFIFQMVIYMGVVLYAPALALNAVTGFHLWGSVLALGVV 377
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
F+ LG L +IW A L +F+G + V
Sbjct: 378 CTFYTTLGGLKAVIWTDVFQA--LVMFLGQVTV 408
>gi|53803574|ref|YP_114581.1| ribonuclease BN [Methylococcus capsulatus str. Bath]
gi|53757335|gb|AAU91626.1| putative ribonuclease BN [Methylococcus capsulatus str. Bath]
Length = 430
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
F + F+P K L G +F +SW LF + V + YS +Y+G A I+ ++
Sbjct: 207 FAYSFIPNTAVKWRPALAGGLFAGLSWKATGFLFAEFTVNSAHYSAIYSGFAVILLSMI 265
>gi|302523065|ref|ZP_07275407.1| ribonuclease BN family membrane protein [Streptomyces sp. SPB78]
gi|302431960|gb|EFL03776.1| ribonuclease BN family membrane protein [Streptomyces sp. SPB78]
Length = 305
Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 176 IIWNGRIYATMLALFIGLIFVHLFL-PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ W + +L L GL +V P + LPG + + W++ FT Y
Sbjct: 183 LAWRVLRWPALLCLVSGLAWVAFSNGPRIARRRRYSLPGGVLATVLWLLATAGFTLYTSL 242
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
TYS +Y LA + L++L++ + + GA+ A +
Sbjct: 243 IGTYSALYGSLAGSVVFLIWLWLSNLALLTGAQFAAEL 280
>gi|258650769|ref|YP_003199925.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
gi|258553994|gb|ACV76936.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
Length = 298
Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P K + M LPG ++ + Y+ + Y LA+ +T L+F Y + +
Sbjct: 212 PKDKHRWMRGLPGAFLAAAVFLTASTGLRLYLSYVYEHGLTYGALATPITFLLFYYFISM 271
Query: 261 FFILGAELNASMIIYY 276
I+GA+ N +++ YY
Sbjct: 272 AIIIGAQFNNALLEYY 287
Searching..................................................done
Results from round 2
>gi|323464029|gb|ADX76182.1| ribonuclease BN-like family protein [Staphylococcus
pseudintermedius ED99]
Length = 445
Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 5/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +LS+FP ++F +L T+ +
Sbjct: 85 NFFNYLIYRIGKDDASGLAAQLAYYFMLSLFPMLIFILSLVPLFNIDS--DTITAQISKN 142
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + IT I V+ + GL +I + A + +SNG+ A+ + N AY V + R++
Sbjct: 143 APAETSSIITGIIDDVMGNASGGLLSIGLILALWTASNGMTAMMNAFNVAYDVEDSRNFV 202
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+++L++ + LL +TL + +F + + + R +LA+
Sbjct: 203 VSKLLAIFFTLLIGITLPLTLVLFTFGEQIGNLLFGPLGLDEQVRWVFSLLRTALPVLAV 262
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ P K + S++PG +F+ I W++G++ F Y+ F+ YS Y + ++
Sbjct: 263 LIVFTIIYTLAPNVKIRFKSVIPGALFSTIVWILGSLAFGFYVSNFANYSKTYGSIGGVI 322
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++LY+ G I+GAE+NA I + RK
Sbjct: 323 VLMLWLYITGFILIIGAEINA---IVHQRK 349
>gi|319892923|ref|YP_004149798.1| Ribonuclease BN [Staphylococcus pseudintermedius HKU10-03]
gi|317162619|gb|ADV06162.1| Ribonuclease BN [Staphylococcus pseudintermedius HKU10-03]
Length = 445
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 5/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +LS+FP ++F +L T+ +
Sbjct: 85 NFFNYLIYRIGKDDASGLAAQLAYYFMLSLFPMLIFILSLVPLFNIDS--DTITAQISKN 142
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + IT I V+ + GL +I + A + +SNG+ A+ + N AY V + R++
Sbjct: 143 APAETSSIITGIIDDVMGNASGGLLSIGLILALWTASNGMTAMMNAFNVAYDVEDSRNFV 202
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+++L++ + LL +TL + +F + + + R +LA+
Sbjct: 203 VSKLLAIFFTLLIGITLPLTLVLFTFGEQIGNLLFGPLGLDEQVRWVFSLLRTALPVLAV 262
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ P K + S++PG +F+ I W++G++ F Y+ F+ YS Y + ++
Sbjct: 263 LIVFTIIYTLAPNVKIRFKSVIPGALFSTIVWILGSLAFGFYVSNFANYSKTYGSIGGVI 322
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++LY+ G I+GAE+NA I + RK
Sbjct: 323 VLMLWLYITGFILIIGAEINA---IVHQRK 349
>gi|254780367|ref|YP_003064780.1| ribonuclease protein [Candidatus Liberibacter asiaticus str. psy62]
gi|254040044|gb|ACT56840.1| ribonuclease protein [Candidatus Liberibacter asiaticus str. psy62]
Length = 281
Score = 254 bits (650), Expect = 8e-66, Method: Composition-based stats.
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP
Sbjct: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY
Sbjct: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG
Sbjct: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST
Sbjct: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP
Sbjct: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
>gi|242371808|ref|ZP_04817382.1| ribonuclease BN [Staphylococcus epidermidis M23864:W1]
gi|242350509|gb|EES42110.1| ribonuclease BN [Staphylococcus epidermidis M23864:W1]
Length = 418
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 5/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++FP ++F L G + V
Sbjct: 73 NFLKYLIYRIGKDDASGLAAQMTYHFVLAMFPMLIFLLTLLGQFITIN-TDQINHKVSQY 131
Query: 70 WPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ A +T + G+ +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 132 IPDQSTADVVTKIFSSISDSANGGVLSIGLILAIWSASNGMSAIINSFNVAYDVEDARNG 191
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +++S Y L+ + V+ + P+ ++ + I RI ++
Sbjct: 192 IVLKILSVIYTLVLGIVFVVAIVLITLGPVISKFLFGPLGLDKQVEWIFDVVRIVLPLII 251
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ I ++ P K+K+ S+LPG +FT I W+VG+ LF YI F Y+ Y LA I
Sbjct: 252 IIILFTVLYSVAPNVKTKLRSVLPGALFTSIIWLVGSFLFGWYISNFGNYNKTYGSLAGI 311
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++LY+ I+GAE+NA + + RK
Sbjct: 312 IILFLWLYITSFIIIIGAEINAII---HQRK 339
>gi|73662219|ref|YP_301000.1| hypothetical protein SSP0910 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494734|dbj|BAE18055.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 390
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 132/270 (48%), Gaps = 5/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + ++D +++ +S +LS+FP ++F ++ +G Q T+ D++
Sbjct: 73 NFFSYLVYRIGKDDASGLSAQLSYYFMLSLFPMLLFLLSIVPVVGVKQ--STIRDLIKDH 130
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A ++ I ++ + GL +I +AA + +SNG+ AL + N AY V + R++
Sbjct: 131 VPSDYAPQVSGIIGDIMENASGGLLSIGLIAALWSASNGMTALMNAFNVAYDVEDSRNFV 190
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L S + L + + + + + + + R ++ +
Sbjct: 191 VAKLYSVLFTLAMIIVMPVALVLPTFGQQIGDLLFGPLGLGDQVKWLFDTIRFVLPVIVV 250
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + ++ P K K++S++PG IF I ++ G+ LF YI F+ YS Y +A I+
Sbjct: 251 LIAFMVLYTLAPNVKIKLLSVIPGAIFATIVFLGGSYLFGIYISNFANYSKTYGSIAGII 310
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++LY+ G I+GAE+NA I++ RK
Sbjct: 311 ILMLWLYITGFIIIIGAEINA---IFHQRK 337
>gi|223044001|ref|ZP_03614041.1| transporter [Staphylococcus capitis SK14]
gi|222442544|gb|EEE48649.1| transporter [Staphylococcus capitis SK14]
Length = 417
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++FP ++F L G + V
Sbjct: 73 NFLNYLIYRIGKDDASGLAAQMTYHFVLAMFPMLIFLLTLLGQFITIN-TDQINQKVSQY 131
Query: 70 WPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ A IT + G+ +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 132 VPDQSTADVITKIFSGISDSANGGVLSIGLILAIWSASNGMSAIINSFNVAYDVEDSRNG 191
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ +++S Y L+ + V+ + P+ ++ + + RI ++
Sbjct: 192 FVLKILSVLYTLVLGIVFVVAIVLITLGPVISKFLFGPLGLDKQVEWVFDLVRIVLPLII 251
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ I ++ P K+K+ S+LPG +FT I W+VG+ LF YI F Y+ Y LA I
Sbjct: 252 IIILFTVLYSVAPNVKTKLRSVLPGALFTSIIWLVGSFLFGWYISNFGNYNKTYGSLAGI 311
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ ++LY+ I+GAE+NA +
Sbjct: 312 IILFLWLYITSFIIIIGAEINAII 335
>gi|325961896|ref|YP_004239802.1| YihY family protein [Arthrobacter phenanthrenivorans Sphe3]
gi|323467983|gb|ADX71668.1| YihY family protein [Arthrobacter phenanthrenivorans Sphe3]
Length = 404
Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
I+ + F ++ +A+ ++ A+LS+FP I+ +L G G Q ++ +V G
Sbjct: 40 ILKKTLREFNKDQCPDLAAALTYYAVLSLFPAILALVSLIGLFGDPQKTTDALLQIVRGF 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P A + + + + PA GL I A + +S V A ++NR Y V E R +
Sbjct: 100 VPAETADTVGGVVSDLASAPAAGLTLIIGLATALWSASGYVGAFGRAMNRIYEVDEGRPF 159
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R LLA V + I++ + V V L + L IW+ + M+
Sbjct: 160 VKLRGTMLVVTLLAVVIVAILAGMLVLSGPVAEAVGGLI-GLSGVFLAIWDIAKWPVMVG 218
Query: 189 LFIGLI-FVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L I +I ++ P K K + G ++V ++ F Y+ F Y+ Y L
Sbjct: 219 LIIVIIAVLYYATPNVKQPKFKWMSMGSGIALFVFLVASLGFGFYVGNFGNYNKTYGTLG 278
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L++L + + GAE +A M
Sbjct: 279 GVIVMLLWLWILNMSLLFGAEFDAEMER 306
>gi|314934048|ref|ZP_07841411.1| YihY family protein [Staphylococcus caprae C87]
gi|313653159|gb|EFS16918.1| YihY family protein [Staphylococcus caprae C87]
Length = 417
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 2/264 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ + +L++FP ++F L G + V
Sbjct: 73 NFLNYLIYRIGKDDASGLAAQMMYHFVLAMFPMLIFLLTLLGQFITIN-TDQINQKVSQY 131
Query: 70 WPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ A IT + G+ +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 132 VPDQSTADVITKIFSGISDSANGGVLSIGLILAIWSASNGMSAIINSFNVAYDVEDSRNG 191
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ +++S Y L+ + V+ + P+ ++ + + RI ++
Sbjct: 192 FVLKILSVLYTLVLGIVFVVAIVLITLGPVISKFLFGPLGLDKQVEWVFDLVRIVLPLII 251
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ I ++ P K+K+ S+LPG +FT I W+VG+ LF YI F Y+ Y LA I
Sbjct: 252 IIILFTVLYSVAPNVKTKLRSVLPGALFTSIIWLVGSFLFGWYISNFGNYNKTYGSLAGI 311
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ ++LY+ I+GAE+NA +
Sbjct: 312 IILFLWLYITSFIIIIGAEINAII 335
>gi|315121834|ref|YP_004062323.1| ribonuclease protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495236|gb|ADR51835.1| ribonuclease protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 284
Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 225/280 (80%), Positives = 255/280 (91%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++YF I+F+I+YDA+EHFVEEDGWAMASHISL+ALLSVFPFIVF ANLAGFLGAH+FVP
Sbjct: 1 MQKYFGIIFNIVYDAVEHFVEEDGWAMASHISLAALLSVFPFIVFCANLAGFLGAHEFVP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TVI V FGAWP+VIAKPITDEI QVLAVP KGLFTISALAA YFSSNG+EALR+SLNRAY
Sbjct: 61 TVISVFFGAWPDVIAKPITDEIFQVLAVPRKGLFTISALAAVYFSSNGIEALRVSLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVVEMRSWYITRLIS GYVLLAS+TLVIMSF+FV +PLALAYV+ FP+LGN++ I+WNG
Sbjct: 121 RVVEMRSWYITRLISLGYVLLASITLVIMSFIFVVVPLALAYVKTLFPSLGNMVEIVWNG 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R+Y +LALFIGLIFVHLFLPA K K+ +LPG+IFT ISW++GAVLFTHYIVTFSTYS
Sbjct: 181 RLYGAVLALFIGLIFVHLFLPAGKRKVWIVLPGIIFTSISWLIGAVLFTHYIVTFSTYSA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
MYAGLASI CLVFLYMLGV FI+GAE+NAS II+YW K+
Sbjct: 241 MYAGLASITICLVFLYMLGVIFIIGAEINASTIIHYWEKR 280
>gi|222087339|ref|YP_002545876.1| ribonuclease protein [Agrobacterium radiobacter K84]
gi|221724787|gb|ACM27943.1| ribonuclease protein [Agrobacterium radiobacter K84]
Length = 310
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 145/279 (51%), Positives = 206/279 (73%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++ ++YDA+ HFVE+DG+AMASH++LS LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPTFVRALYKVVYDAVFHFVEDDGFAMASHVALSTLLAVFPFLIFGTALASFLGASQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + ++F WPE IAKP+ D+++QVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAVHLIFDTWPEAIAKPVADQVVQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY RL S GYVL+A + ++S + VA+PLAL Y R++ P L ++L ++++
Sbjct: 121 RVPETRPWYFNRLASLGYVLIAVLIFALLSILLVAVPLALNYTRQWLPGLADILDVVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T+ L GL+ +HL+L A + ++ ++PGV T + W +GA+LF +Y+ TF+ Y+
Sbjct: 181 RIYGTIFLLVAGLLILHLWLAAGRRRLFDVIPGVFLTLVFWSIGALLFAYYLSTFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M L+FLYML V FI+GAE+NA+++ + R+
Sbjct: 241 TYAGLASVMIVLIFLYMLAVIFIMGAEINAALMKFKVRR 279
>gi|220911338|ref|YP_002486647.1| ribonuclease BN [Arthrobacter chlorophenolicus A6]
gi|219858216|gb|ACL38558.1| ribonuclease BN [Arthrobacter chlorophenolicus A6]
Length = 402
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
I + F ++ +A+ ++ A+LS+FP I+ +L G G Q ++ +V G
Sbjct: 40 IAKKTLREFSKDQCPDLAASLTYYAVLSLFPAILALVSLVGLFGDPQKTTDALLQIVSGF 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALA-AAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I + + PA G + L A + +S V A +LNR Y V E R +
Sbjct: 100 VPGETMDTIGGVVKDLANAPAAGFTLVIGLGTALWSASGYVGAFGRALNRVYEVDEGRPF 159
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
R LLA V + I++ + V V F L + L +WN + ++
Sbjct: 160 VKLRGTMLAVTLLAIVIIAILAGMLVLSGPVAEAVGGFI-GLSGVFLAVWNIAKWPVMVV 218
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + ++ P K K + G + +++ ++ F Y+ F Y+ Y L
Sbjct: 219 LIIVIIAVLYYATPNVKQPKFKWMSMGSGIALVVFLLASLGFGFYVGNFGNYNKTYGALG 278
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L++L + + GAE +A
Sbjct: 279 GVIVMLLWLWILNMSLLFGAEFDAETER 306
>gi|300114181|ref|YP_003760756.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299540118|gb|ADJ28435.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 447
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 8/268 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E+ +A+ ++ ALL++FP + ++ G + V ++ + G
Sbjct: 32 DVLLRVKNELSEDKLTVIAAGVAFYALLAIFPALTALVSIYGLVADPADVQQQLNTLSGF 91
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D++ + A L S L A + ++ G++ L +LN Y E R
Sbjct: 92 IPAEAQTLLNDQLSSITAHSQTALGVGVIGSILLALWGATKGLKTLMEALNVVYDEKETR 151
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + A + VI + VA+P L F ++ + R
Sbjct: 152 GFLKLNATALILTFGALMLGVIAIGLVVALPALL----GNFGLGADVRTWVSLLRWPVLA 207
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+GL V+ + P+ + + G + + W+ +V F++Y+ FS+Y+ Y L
Sbjct: 208 FVAMLGLAVVYRYGPSRSQPRWHWVSWGAVLATVLWIAASVGFSYYVSNFSSYNETYGSL 267
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
++ L++L++ +LGAELNA M
Sbjct: 268 GGVVVFLMWLFITAFIILLGAELNAEME 295
>gi|332716378|ref|YP_004443844.1| ribonuclease [Agrobacterium sp. H13-3]
gi|325063063|gb|ADY66753.1| ribonuclease [Agrobacterium sp. H13-3]
Length = 305
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 144/269 (53%), Positives = 195/269 (72%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ +DA HF E+DGWAMASH++LS LL++FPF++FG LAGFLGA QF T + ++F
Sbjct: 10 KVAFDAYSHFAEDDGWAMASHMALSILLALFPFLIFGTALAGFLGADQFSETAVHLIFDT 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WPE IA P+ ++ QVL +P GL TIS LAAAYF+SNGVEALRISLNRAYRV E R WY
Sbjct: 70 WPEAIAGPLAAQVQQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAYRVTETRWWY 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
ITRL+S YVL+A V +S V VA+P+A ++ + FP L + L + + +Y T++ L
Sbjct: 130 ITRLLSLLYVLIAVVVFTGISIVLVAVPVATSFAEQRFPWLTDALNTVSSLGLYGTIVVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+GL+ HL+LPA K +I + PG++ T I WV+GA +F +Y+ TF+ Y+ YAGLAS+M
Sbjct: 190 TVGLVAAHLWLPAGKRRIWDVWPGILLTMIFWVIGAAIFAYYLSTFANYAATYAGLASVM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
LVFLYM+GV F+LGAE+NA+++ Y R
Sbjct: 250 VVLVFLYMVGVIFMLGAEVNAALMKYKVR 278
>gi|319399849|gb|EFV88096.1| YihY family protein [Staphylococcus epidermidis FRI909]
Length = 392
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 5/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +L++FP ++F L G + V
Sbjct: 66 NFFSYLIYRIGKDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQF-ITIDANQINQKVSQY 124
Query: 70 WPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ A + + + + G+ ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 125 VPDQETASIVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNG 184
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +L+S Y L+ V+ + P+ ++ + I RI ++
Sbjct: 185 IVVKLLSILYTLVLGAVFVVAVVLITLGPVINKFLFGPLGIDNQIEWIFNLVRIVIPLII 244
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+FI ++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I
Sbjct: 245 IFIIFTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGI 304
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++LY+ I+GAE+NA + + RK
Sbjct: 305 IILFLWLYITSFIIIIGAEINAII---HQRK 332
>gi|159185810|ref|NP_357022.2| transporter [Agrobacterium tumefaciens str. C58]
gi|159140944|gb|AAK89807.2| transporter [Agrobacterium tumefaciens str. C58]
Length = 305
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 144/269 (53%), Positives = 194/269 (72%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ +DA HF E+DGWAMASH++LS LL++FPF++FG LAGFLGA QF T + ++F
Sbjct: 10 KVAFDAYSHFAEDDGWAMASHMALSILLALFPFLIFGTALAGFLGADQFSETAVHLIFDT 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WPE IA P+ ++ QVL +P GL TIS LAAAYF+SNGVEALRISLNRAYRV E R WY
Sbjct: 70 WPEAIAGPLAAQVQQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAYRVTETRWWY 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+TRL+S YVL+A V +S V VA+P+A ++ FP L +LL + + +Y T++ L
Sbjct: 130 VTRLLSLLYVLIAVVVFTGISIVLVAVPVATSFAEARFPWLTDLLNTVSSLGLYGTIVVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
GL+ HL+LPA K +I + PG++ T I WV+GA +F +Y+ TF+ Y+ YAGLAS+M
Sbjct: 190 TAGLVAAHLWLPAGKRRIWDVWPGILLTMIFWVIGAAIFAYYLSTFANYAATYAGLASVM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
LVFLYM+GV F+LGAE+NA+++ Y R
Sbjct: 250 VVLVFLYMVGVIFMLGAEVNAALMKYKVR 278
>gi|57867339|ref|YP_188990.1| ribonuclease BN [Staphylococcus epidermidis RP62A]
gi|251809911|ref|ZP_04824384.1| ribonuclease BN [Staphylococcus epidermidis BCM-HMP0060]
gi|282874567|ref|ZP_06283452.1| YihY family protein [Staphylococcus epidermidis SK135]
gi|293367803|ref|ZP_06614452.1| YihY family protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|57637997|gb|AAW54785.1| ribonuclease BN, putative [Staphylococcus epidermidis RP62A]
gi|251806576|gb|EES59233.1| ribonuclease BN [Staphylococcus epidermidis BCM-HMP0060]
gi|281296706|gb|EFA89215.1| YihY family protein [Staphylococcus epidermidis SK135]
gi|291318142|gb|EFE58539.1| YihY family protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|329726921|gb|EGG63379.1| YihY family protein [Staphylococcus epidermidis VCU144]
gi|329734775|gb|EGG71081.1| YihY family protein [Staphylococcus epidermidis VCU045]
gi|329734799|gb|EGG71104.1| YihY family protein [Staphylococcus epidermidis VCU028]
Length = 392
Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 5/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +L++FP ++F L G + V
Sbjct: 66 NFFSYLIYRIGKDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQF-ITIDANQINQKVSQY 124
Query: 70 WPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ A + + + + G+ ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 125 VPDQETASIVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNG 184
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +L+S Y L+ V+ + P+ ++ + I RI ++
Sbjct: 185 VVVKLLSILYTLVLGAVFVVAVVLITLGPVINKFLFGPLGIDNQIEWIFNLVRIVIPLII 244
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+FI ++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I
Sbjct: 245 IFIIFTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGI 304
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++LY+ I+GAE+NA + + RK
Sbjct: 305 IILFLWLYITSFIIIIGAEINAII---HQRK 332
>gi|170739721|ref|YP_001768376.1| ribonuclease BN [Methylobacterium sp. 4-46]
gi|168193995|gb|ACA15942.1| ribonuclease BN [Methylobacterium sp. 4-46]
Length = 386
Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats.
Identities = 61/274 (22%), Positives = 126/274 (45%), Gaps = 4/274 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+Y F ++ ++A+ ++ LL++FP I +L G + + ++ G
Sbjct: 89 DILYRVYVEFQKDRVLSVAAGVTFYTLLAIFPAIAALVSLYGLFTDPATINDHLSLLQGV 148
Query: 70 WPEVIAKPITDEILQVLAVPAK--GLFTISALA-AAYFSSNGVEALRISLNRAYRVVEMR 126
P I D++ ++ A GL ++LA + + ++ GV+A+ +LN Y E R
Sbjct: 149 LPSGALDIIGDQVKRITAKGGTTLGLTFFTSLAISLWSANAGVKAIFDALNIVYEEEEKR 208
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L S + L + +V V +P+ L +V F ++ I R +
Sbjct: 209 SFIRLNLQSLAFTLGGLLFVVFALTGIVVLPVILNFVGTFGISISPKAWYIALLRWPILL 268
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + L ++ + P+ K + + PG + + W++G++ F+ Y+ F +Y+ Y L
Sbjct: 269 AVLLLALAVLYRYGPSRDKPQWRWVTPGSLIAGVVWIIGSIAFSWYVAHFGSYNETYGSL 328
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + ++++ +LG E+NA + R
Sbjct: 329 GAAVGFMTWIWISATIVLLGGEINAELEHQTIRD 362
>gi|27468486|ref|NP_765123.1| transporter [Staphylococcus epidermidis ATCC 12228]
gi|27316033|gb|AAO05167.1|AE016749_113 transporter [Staphylococcus epidermidis ATCC 12228]
Length = 392
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 5/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +L++FP ++F L G + V
Sbjct: 66 NFFSYLIYRIGKDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQF-ITIDANQINQKVSQY 124
Query: 70 WPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ A + + + + G+ ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 125 VPDQETASIVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNG 184
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +L+S Y L+ V+ + P+ ++ + I RI ++
Sbjct: 185 VVVKLLSILYTLVLGAVFVVAVVLITLGPVINKFLFGPLGIDNQIEWIFNLVRIVIPLII 244
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+FI ++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I
Sbjct: 245 IFIIFTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGI 304
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++LY+ I+GAE+NA + + RK
Sbjct: 305 IILFLWLYITSFIIIIGAEINAII---HQRK 332
>gi|313632903|gb|EFR99846.1| transport protein [Listeria seeligeri FSL N1-067]
gi|313637503|gb|EFS02939.1| transport protein [Listeria seeligeri FSL S4-171]
Length = 289
Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 134/273 (49%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F + + D A+ ++ L S+FP ++ A L ++ + +V +++
Sbjct: 14 IFQVGQTVTGRVGQNDVSGNAAQLAYYMLFSIFPMMLIAATLLAYMHIDK--DSVFNMLK 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + + + +L GL +I +A + +SNG+ A+ +LN+AY V R+
Sbjct: 72 EFAPEQILDFLEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKALNKAYGVTNKRN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + RL+S + L T+ + V ++ + L N R T++
Sbjct: 132 YVVQRLLSMLFTLAMLATVGATLLLIVFGQQIGLFLINHLNFSEDFLSFWNNLRWTVTLI 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ F++ P +S ++S+LPG IF+ I W V +V F +Y+ F+ YS Y +
Sbjct: 192 VIFVVFTFLYWVAPNRRSTLISVLPGAIFSTIGWTVASVGFAYYVNNFANYSATYGSIGV 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 252 IIILMLWFYLTGIILMVGGELNATLAIRKKKKQ 284
>gi|315303543|ref|ZP_07874107.1| transporter [Listeria ivanovii FSL F6-596]
gi|313628085|gb|EFR96654.1| transporter [Listeria ivanovii FSL F6-596]
Length = 289
Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats.
Identities = 66/273 (24%), Positives = 134/273 (49%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F + + D A+ ++ L S+FP ++ A L ++ + +V +++
Sbjct: 14 IFQVGQTVTGRVGQNDVSGNAAQLAYYMLFSIFPMMLIAATLLAYMHIDK--DSVFNMLK 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + + + +L GL +I +A + +SNG+ A+ SLN+AY V R+
Sbjct: 72 EFAPEQILDFLEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + RL+S + L T+ + V ++ + L N R T++
Sbjct: 132 YVMQRLLSMLFTLAMLATVGATLLLIVFGQQIGLFLINHLNFSEDFLDFWNNLRWTVTLI 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ F++ P +S ++S+LPG IF+ + W + +V F +Y+ F+ YS Y +
Sbjct: 192 VIFVVFTFLYWVAPNRRSTLISVLPGAIFSTVGWTIASVGFAYYVNNFANYSATYGSIGV 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +++
Sbjct: 252 IIILMLWFYLTGIILMVGGELNATLAIRKKKRQ 284
>gi|242241721|ref|ZP_04796166.1| ribonuclease BN [Staphylococcus epidermidis W23144]
gi|242234811|gb|EES37122.1| ribonuclease BN [Staphylococcus epidermidis W23144]
Length = 392
Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 5/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +L++FP ++F L G + V
Sbjct: 66 NFFSYLIYRIGKDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQF-ITIDANQINQKVSQY 124
Query: 70 WPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ A + + + + G+ ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 125 VPDQETASIVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNG 184
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +L+S Y L+ V+ + P+ ++ + I RI ++
Sbjct: 185 IVVKLLSILYTLVLGAVFVVAVVLITLGPVINKFLFGPLGIDNQIEWIFNLVRIVIPLII 244
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+FI ++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I
Sbjct: 245 IFIIFTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGI 304
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++LY+ I+GAE+NA + + RK
Sbjct: 305 IILFLWLYITSFIIIIGAEINAII---HQRK 332
>gi|289435039|ref|YP_003464911.1| hypothetical protein lse_1674 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171283|emb|CBH27825.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 289
Score = 231 bits (590), Expect = 8e-59, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 134/273 (49%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F + + D A+ ++ L S+FP ++ A L ++ + +V +++
Sbjct: 14 IFQVGQTVTGRVGQNDVSGNAAQLAYYMLFSIFPMMLIAATLLAYMHIDK--DSVFNMLK 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + + + +L GL +I +A + +SNG+ A+ +LN+AY V R+
Sbjct: 72 EFAPEQILDFLEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKALNKAYGVTNKRN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + RL+S + L T+ + V ++ + L N R T++
Sbjct: 132 YVVQRLLSMFFTLAMLATVGATLLLIVFGQQIGLFLINHLNFSEDFLSFWNNLRWTVTLI 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ F++ P +S ++S+LPG IF+ I W V +V F +Y+ F+ YS Y +
Sbjct: 192 VIFVVFTFLYWVAPNRRSTLISVLPGAIFSTIGWTVASVGFAYYVNNFANYSATYGSIGV 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 252 IIILMLWFYLTGIILMVGGELNATLAIRKKKKQ 284
>gi|313608345|gb|EFR84318.1| transport protein [Listeria monocytogenes FSL F2-208]
Length = 289
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 130/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
+ D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGKNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|46907937|ref|YP_014326.1| ribonuclease BN [Listeria monocytogenes serotype 4b str. F2365]
gi|47094251|ref|ZP_00231961.1| ribonuclease BN, putative [Listeria monocytogenes str. 4b H7858]
gi|217964144|ref|YP_002349822.1| transporter [Listeria monocytogenes HCC23]
gi|226224309|ref|YP_002758416.1| transport protein [Listeria monocytogenes Clip81459]
gi|254826046|ref|ZP_05231047.1| YihY family protein [Listeria monocytogenes FSL J1-194]
gi|254853622|ref|ZP_05242970.1| YihY family protein [Listeria monocytogenes FSL R2-503]
gi|254932848|ref|ZP_05266207.1| YihY family protein [Listeria monocytogenes HPB2262]
gi|255520201|ref|ZP_05387438.1| transport protein [Listeria monocytogenes FSL J1-175]
gi|300764677|ref|ZP_07074668.1| ribonuclease BN [Listeria monocytogenes FSL N1-017]
gi|46881206|gb|AAT04503.1| YihY family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47017379|gb|EAL08202.1| ribonuclease BN, putative [Listeria monocytogenes str. 4b H7858]
gi|217333414|gb|ACK39208.1| transporter [Listeria monocytogenes HCC23]
gi|225876771|emb|CAS05480.1| Putative transport protein [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606997|gb|EEW19605.1| YihY family protein [Listeria monocytogenes FSL R2-503]
gi|293584402|gb|EFF96434.1| YihY family protein [Listeria monocytogenes HPB2262]
gi|293595286|gb|EFG03047.1| YihY family protein [Listeria monocytogenes FSL J1-194]
gi|300514563|gb|EFK41619.1| ribonuclease BN [Listeria monocytogenes FSL N1-017]
gi|307571289|emb|CAR84468.1| ribonuclease BN, putative [Listeria monocytogenes L99]
gi|328466464|gb|EGF37607.1| transport protein [Listeria monocytogenes 1816]
gi|332312148|gb|EGJ25243.1| Transporter [Listeria monocytogenes str. Scott A]
Length = 289
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|332701683|ref|ZP_08421771.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
gi|332551832|gb|EGJ48876.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
Length = 373
Score = 230 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 117/275 (42%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI+ +++ +A+ ++ A+L++FP I ++ G L + + I V G
Sbjct: 79 RDILKRTWAEQSKDNLSLVAAGVAFYAMLALFPAIAALISIYGLLADPAQLQSQIGEVSG 138
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P I ++ +V++ L + L A + +S G++ L +LN +Y E
Sbjct: 139 VLPGDARSIIQSQLSKVVSGAGGALSLGAAVGLLLALWSASKGMKGLIQALNISYGEEES 198
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + IS + + ++ VA+P L + ++ + R
Sbjct: 199 RGFLKLNAISLLLTVSGLIFFILALTAVVAMPALLDNLG----LPDAVMWTVSIARWPLL 254
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
LA + L ++ + P + + + G ++W+ ++LF+ Y+ F Y+ Y
Sbjct: 255 ALAGMLALAVLYRYAPDRDEPRWRWVSWGSAGATMAWIAASLLFSLYVSQFGNYNETYGT 314
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ L +L++ +LGAELNA M +
Sbjct: 315 LGAVVILLTWLFLTAYVVLLGAELNAEMERQTRKD 349
>gi|163759906|ref|ZP_02166990.1| putative ribonuclease rnase bn (rbn) transmembrane protein [Hoeflea
phototrophica DFL-43]
gi|162282864|gb|EDQ33151.1| putative ribonuclease rnase bn (rbn) transmembrane protein [Hoeflea
phototrophica DFL-43]
Length = 317
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 133/272 (48%), Positives = 192/272 (70%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+I+DA+ HF ++DGWAMASH++LS L+++FPF++FG LA FLGA+ + T ++F
Sbjct: 39 RSVIWDAVTHFNDDDGWAMASHVALSILMALFPFMIFGTALASFLGANAYAETASHLIFD 98
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
WPE IA PI++E+++VL V GL T+S LAAA+FS+NGVEALR+SLNRAYRV E R+W
Sbjct: 99 TWPESIAAPISNEVVKVLTVERGGLLTLSVLAAAFFSANGVEALRVSLNRAYRVTETRAW 158
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
Y+TR+ S +V++A + ++ +SF+ V PLAL R+F P + L+ + N RI
Sbjct: 159 YVTRIQSLLFVVVAVLVIMAISFLLVLAPLALKLARQFVPWMETLISAVDNWRILIAAAV 218
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L IGLI HL+LP + K+ +LPG+ T ++W+ GA++F Y+ F+TY + YAGLASI
Sbjct: 219 LVIGLIVSHLWLPDGRRKLFDVLPGIGVTLVAWMAGALMFASYLKEFATYVSTYAGLASI 278
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M LVFLY++ FILGAE+NA+++ R K
Sbjct: 279 MIALVFLYIVAAIFILGAEINAALLKAAERAK 310
>gi|319650226|ref|ZP_08004372.1| hypothetical protein HMPREF1013_00977 [Bacillus sp. 2_A_57_CT2]
gi|317398057|gb|EFV78749.1| hypothetical protein HMPREF1013_00977 [Bacillus sp. 2_A_57_CT2]
Length = 300
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 2/254 (0%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ F ++ +A+ + +LS+FP ++ ++ +L + + P
Sbjct: 13 KEFKKDRATGLAAEQAYYYMLSIFPLLILLISIVPYLSLDP--QKALSYLQSVMPSDSFN 70
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I D ++ ++ P GL T + + +SNG++A ++N A+ V E RS+ +RLIS
Sbjct: 71 VIEDNVVDIITKPNGGLLTFGIIGTLWSASNGMQAFIRAMNDAFDVEETRSFIKSRLISI 130
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
G L +I + V + + +V F + ++I R + + L +
Sbjct: 131 GLTLGLLAAFIIAMVLPVFGKVIMNFVENFINIPDGMQILINVLRWAIAFVIMVTVLAIL 190
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P +LPG I + W + + + Y+ F YS Y L ++ +++ +
Sbjct: 191 YKVAPNKHFPFKQVLPGAIAATVMWQLISFGLSFYVSNFGNYSATYGSLGGVIVLMLWFF 250
Query: 257 MLGVFFILGAELNA 270
+ G+ ++G E++A
Sbjct: 251 LTGLALVIGGEISA 264
>gi|313623420|gb|EFR93635.1| transport protein [Listeria innocua FSL J1-023]
Length = 289
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|16803746|ref|NP_465231.1| hypothetical protein lmo1706 [Listeria monocytogenes EGD-e]
gi|224499572|ref|ZP_03667921.1| hypothetical protein LmonF1_07697 [Listeria monocytogenes Finland
1988]
gi|224503369|ref|ZP_03671676.1| hypothetical protein LmonFR_12785 [Listeria monocytogenes FSL
R2-561]
gi|255028332|ref|ZP_05300283.1| hypothetical protein LmonL_02181 [Listeria monocytogenes LO28]
gi|16411160|emb|CAC99784.1| lmo1706 [Listeria monocytogenes EGD-e]
Length = 289
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|47097606|ref|ZP_00235132.1| ribonuclease BN, putative [Listeria monocytogenes str. 1/2a F6854]
gi|254829230|ref|ZP_05233917.1| YihY family protein [Listeria monocytogenes FSL N3-165]
gi|254832411|ref|ZP_05237066.1| hypothetical protein Lmon1_13734 [Listeria monocytogenes 10403S]
gi|254900789|ref|ZP_05260713.1| hypothetical protein LmonJ_13274 [Listeria monocytogenes J0161]
gi|254913725|ref|ZP_05263737.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254938112|ref|ZP_05269809.1| YihY family protein [Listeria monocytogenes F6900]
gi|284802152|ref|YP_003414017.1| hypothetical protein LM5578_1907 [Listeria monocytogenes 08-5578]
gi|284995294|ref|YP_003417062.1| hypothetical protein LM5923_1859 [Listeria monocytogenes 08-5923]
gi|47014019|gb|EAL05026.1| ribonuclease BN, putative [Listeria monocytogenes str. 1/2a F6854]
gi|258601641|gb|EEW14966.1| YihY family protein [Listeria monocytogenes FSL N3-165]
gi|258610724|gb|EEW23332.1| YihY family protein [Listeria monocytogenes F6900]
gi|284057714|gb|ADB68655.1| hypothetical protein LM5578_1907 [Listeria monocytogenes 08-5578]
gi|284060761|gb|ADB71700.1| hypothetical protein LM5923_1859 [Listeria monocytogenes 08-5923]
gi|293591740|gb|EFG00075.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 289
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|227823215|ref|YP_002827187.1| putative ribonuclease protein [Sinorhizobium fredii NGR234]
gi|227342216|gb|ACP26434.1| putative ribonuclease protein [Sinorhizobium fredii NGR234]
Length = 295
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 137/279 (49%), Positives = 195/279 (69%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M I++ +++DA+ HF E+DGWAMASH++LS+L++VFPF++FG L FLGA QF
Sbjct: 1 MPASLRIIWKVVFDALWHFSEDDGWAMASHVALSSLMAVFPFLIFGTALGSFLGADQFAV 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + ++F AWPE IAKP+ DEI++VL + G+ T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHLIFDAWPESIAKPVADEIVEVLTIQRGGVLTLSVVAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WYITRL S G+VL + L ++S + VA+PLA+ ++ P L +L + N
Sbjct: 121 RVAESRPWYITRLASLGFVLAGVLILAVISILLVAVPLAVRNADQWLPWLDAVLATVDNW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ L GL+ HL+LP KI+ +LPGV+ T + W +GA F Y+ TFS Y
Sbjct: 181 GLALALVMLTGGLLVSHLWLPDGHRKIVDVLPGVLLTLLLWSIGAYAFASYLATFSNYVA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLASI+ LVFLYM+G FI+GAE+NA+++ + ++
Sbjct: 241 TYAGLASIVVVLVFLYMVGAIFIIGAEINAAILKFKVKR 279
>gi|315282669|ref|ZP_07871025.1| transport protein [Listeria marthii FSL S4-120]
gi|313613685|gb|EFR87473.1| transport protein [Listeria marthii FSL S4-120]
Length = 289
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 68/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ D + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEDNLNTLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLVVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|222151855|ref|YP_002561015.1| hypothetical protein MCCL_1612 [Macrococcus caseolyticus JCSC5402]
gi|222120984|dbj|BAH18319.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 342
Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 123/263 (46%), Gaps = 2/263 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + ++D +++ ++ LLS+FP ++F L T+ +++
Sbjct: 73 NFLSMLLFRIGKDDAAGLSAQLAYYFLLSLFPMLIFLLTLVPLFKVSP--ETITNMIAKN 130
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A ITD I V+ GL + +AA + +SNG+ AL + N +Y V + R+
Sbjct: 131 APGDAANMITDVISDVMNNANGGLLSFGLIAALWSASNGMTALMNAFNVSYEVEDARNPI 190
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+++L+S + ++ + + + V Y+ F I ++ ++
Sbjct: 191 VSKLLSVLFTVVMVLVFGVALALPVFGEQIGNYLFGQFGLESQFKWIFSLVKVALPLIVT 250
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI ++ P K + S++PG +F I W+ + LF +Y+ F YS Y + I+
Sbjct: 251 FIVFTTLYAIAPNIKLQFKSVIPGALFATIVWIGASFLFGYYVSNFGNYSKTYGSIGGII 310
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
+++LY+ G I+G+++NA +
Sbjct: 311 VLMLWLYLTGFIIIIGSQINAII 333
>gi|290893364|ref|ZP_06556349.1| YihY family protein [Listeria monocytogenes FSL J2-071]
gi|290557015|gb|EFD90544.1| YihY family protein [Listeria monocytogenes FSL J2-071]
Length = 308
Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|220921071|ref|YP_002496372.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
gi|219945677|gb|ACL56069.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
Length = 386
Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 122/274 (44%), Gaps = 4/274 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++Y F ++ ++A+ ++ LL++FP I +L G + + I ++ G
Sbjct: 89 DVLYRVYLEFQKDRVLSVAAGVTFYTLLAMFPAIAALVSLYGLIADPATINDHIALLQGV 148
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMR 126
P I +++ ++ + L + + ++ GV+A+ +LN Y E R
Sbjct: 149 LPSGALDIIGEQVKRISSKGGTTLGLTFFTTLALSLWSANAGVKAIFDALNIVYEEEEKR 208
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L S + L + +V+ V +P+ L ++ F ++ I R +
Sbjct: 209 SFIKLNLQSLTFTLGGLLFVVVALSGIVVLPVILNFIGNFGISISPKAWYIALLRWPLLL 268
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L ++ + P+ + K + PG + + W+VG++ F+ Y+ F +Y+ Y L
Sbjct: 269 AILLFALALLYRYGPSRDEPKWRWVTPGSLIAGVVWLVGSIAFSWYVAHFGSYNETYGSL 328
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + ++++ +LG E+NA M R
Sbjct: 329 GAAIGFMTWIWISATIVLLGGEINAEMEHQTVRD 362
>gi|86359370|ref|YP_471262.1| putative ribonuclease protein [Rhizobium etli CFN 42]
gi|86283472|gb|ABC92535.1| putative ribonuclease protein [Rhizobium etli CFN 42]
Length = 307
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 151/276 (54%), Positives = 208/276 (75%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY TRL S GYVL+A + +S + VA+PLAL Y RK+ P + L ++++
Sbjct: 121 RVQETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARKWLPLFADTLDVVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L IGL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTIGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALVFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
YAGLAS+M L+FLYM+GV FI+GAE+NA++I +
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALIKFR 276
>gi|16800885|ref|NP_471153.1| hypothetical protein lin1818 [Listeria innocua Clip11262]
gi|16414320|emb|CAC97049.1| lin1818 [Listeria innocua Clip11262]
gi|313618455|gb|EFR90462.1| transport protein [Listeria innocua FSL S4-378]
Length = 289
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNTLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLVVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W + +V F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTIASVGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|190893623|ref|YP_001980165.1| ribonuclease [Rhizobium etli CIAT 652]
gi|190698902|gb|ACE92987.1| putative ribonuclease protein [Rhizobium etli CIAT 652]
Length = 307
Score = 228 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 152/276 (55%), Positives = 209/276 (75%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++
Sbjct: 121 RVQETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
YAGLAS+M L+FLYM+GV FI+GAE+NA++I +
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALIKFR 276
>gi|218674258|ref|ZP_03523927.1| putative ribonuclease protein [Rhizobium etli GR56]
Length = 314
Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats.
Identities = 149/274 (54%), Positives = 205/274 (74%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
E ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF T
Sbjct: 10 EVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSSTA 69
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAYRV
Sbjct: 70 IHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAYRV 129
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++ RI
Sbjct: 130 QETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLDIVFSWRI 189
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
Y T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+ Y
Sbjct: 190 YGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTATY 249
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
AGLAS+M L+FLYM+G FI+GAE+NA++I +
Sbjct: 250 AGLASVMIVLIFLYMVGAIFIIGAEINAALIKFR 283
>gi|330685613|gb|EGG97259.1| YihY family protein [Staphylococcus epidermidis VCU121]
Length = 411
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + ++D +A+ ++ +L++FP ++F L F Q + I + +
Sbjct: 71 NFFSYLVYRIGKDDASGLAAQMTYHFVLAMFPMLIFLLTLLPFFNIEQ---SQITSMLSS 127
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I V + GL ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 128 APSETSSIIKGVIGDVTKNSSGGLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 187
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V I + Y+ + + R+ ++ +
Sbjct: 188 LLKLLSVVFTVVMGVVFAIAMALPTLGSAISHYLFGPLGLDSEVKWVFNLIRVVLPLIII 247
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ I ++ P K+KI+S+LPG IFT I W++G+ F YI F YS Y +A I+
Sbjct: 248 LVLFIVLYSVAPNVKTKILSVLPGAIFTSIIWLLGSFAFGWYISNFGNYSKTYGSIAGII 307
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + + K
Sbjct: 308 ILLIWLYLTSFIIIIGAEINAIIHQRHVIK 337
>gi|15966391|ref|NP_386744.1| putative ribonuclease RNase BN (RBN) transmembrane protein
[Sinorhizobium meliloti 1021]
gi|307313022|ref|ZP_07592649.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
gi|307321028|ref|ZP_07600434.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|15075662|emb|CAC47217.1| Probable transporter [Sinorhizobium meliloti 1021]
gi|306893303|gb|EFN24083.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|306899341|gb|EFN29975.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
Length = 291
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 143/278 (51%), Positives = 195/278 (70%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + I++ +++DA+ HF E+DGWAMASH++LS+L++VFPF++FG LA FLGA QF
Sbjct: 1 MPAFVRIIWKVVFDALWHFSEDDGWAMASHVALSSLMAVFPFLIFGTALASFLGADQFAQ 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + ++F WPE IAKP+ DE+++VL +P L TIS LAAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHLIFDTWPESIAKPVADEVVRVLTIPRGSLLTISVLAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY+TRL S G+VL A + L +S + VA+PLA+ ++FP L L+ + +
Sbjct: 121 RVAESRYWYVTRLASLGFVLGAVLILAALSILLVAVPLAVRNADQWFPWLDALMAAVDDW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T+ L GL+ HL+LPA ++ +LPG+ T + W VGA F YI FS Y T
Sbjct: 181 GLPLTLTMLTAGLLVAHLWLPAGHRNVVDVLPGIFLTLVLWSVGAYAFASYIANFSNYVT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YAGLASIM LVFLYMLG FI+GAE+NA+++ Y +
Sbjct: 241 TYAGLASIMIVLVFLYMLGAIFIIGAEINAAILKYKVK 278
>gi|188580068|ref|YP_001923513.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179343566|gb|ACB78978.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 386
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 123/275 (44%), Gaps = 9/275 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI F ++ ++A+ ++ LLS+FP I G + + + + G
Sbjct: 93 WDIATRVYLEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLHG 152
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
PE I +++ ++ A + L F S + + ++ ++A+ +LN Y E
Sbjct: 153 VLPESAIDIIGEQVKRISAKGSGTLGVTFFTSLTLSLWSANAAMKAMFDALNVVYEEEEK 212
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+++ + S + A + +++ V +P+ ++ LG+ +I R
Sbjct: 213 RNFFWLNVRSLTFTGGALLFIILALMSIVVLPVVFNFL-----GLGDGARLIAMARWPVL 267
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L L GL ++ + P+ +++ + G + + W+ ++LF+ Y+ F Y+ Y
Sbjct: 268 LLVLLGGLAVLYRYGPSRERARWRWVGAGSVVAGLLWLAASILFSWYVANFGNYNETYGS 327
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ + ++++ +LG E+NA + R
Sbjct: 328 LGAVIGFMTWIWISATIVLLGGEINAEIEHQTARD 362
>gi|111019911|ref|YP_702883.1| tRNA processing ribonuclease BN [Rhodococcus jostii RHA1]
gi|110819441|gb|ABG94725.1| tRNA processing ribonuclease BN [Rhodococcus jostii RHA1]
Length = 346
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 5/270 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVF 67
+ +I F + +A+ ++ A+LS+FP ++ +L G G Q V+ +V
Sbjct: 29 WYVIRKTAHEFTRDQCTDLAAALTYYAVLSLFPALLALVSLLGVFGQGQRTTDAVLQMVD 88
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D I Q++A P G+ + L A + +S + A ++NR Y V E R
Sbjct: 89 DLGPSSAVDTLRDPIAQLVAAPTAGMALVLGLLGAVWSASGYIGAFGRAMNRMYEVEEGR 148
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYAT 185
+ R ++ V + + + V G+ L +WN R
Sbjct: 149 PVWKLRPQMLAVTIVGLVLVAAAAAMLALSGPVARSVGDTI-GFGDTALTVWNIARWPFV 207
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + + ++ P K K I G ++W+V +VLF Y+ F +Y+ Y
Sbjct: 208 LGIVVVAVAILYYVTPNVKQPKFRWISAGAFLAIVTWIVASVLFGLYVANFGSYNKTYGS 267
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMII 274
LA ++ L++L++ + + GAEL+A +
Sbjct: 268 LAGVIVFLLWLWITNLALLFGAELDAELER 297
>gi|16264688|ref|NP_437480.1| hypothetical protein SM_b21363 [Sinorhizobium meliloti 1021]
gi|15140826|emb|CAC49340.1| conserved hypothetical membrane protein [Sinorhizobium meliloti
1021]
Length = 364
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 127/276 (46%), Gaps = 10/276 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + + E+ +A+ ++ LLSVFP + ++ G + + ++
Sbjct: 70 LRDVFWRVVSQISEDRISLIAAGVTFYVLLSVFPALASLVSIYGLVSDPATIAEQATLLA 129
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + +TD++ + + L F L A + + NGV AL ++N AY E
Sbjct: 130 AVLPAQSLQMMTDQLETLSSQKTSSLSFGFIAGLLFALWSARNGVGALFEAMNIAYDETE 189
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS+ L+S G+ L + ++ +P LA++ L + R
Sbjct: 190 KRSFIRLTLLSIGFTLAGLILTAVLIAAIAVLPAVLAFLHLELEGL------LRFVRWPV 243
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + G+ ++ + P+ + +K+ + G + I W+V ++ F++YI F+ Y+ Y
Sbjct: 244 MLLLIAAGITLIYRYGPSREPAKLRWLTWGAALSTICWLVASLAFSYYIDNFANYNATYG 303
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ ++++++ + I+GAELNA + R
Sbjct: 304 ALGALIGFMLWIWISTMIVIIGAELNAELEHQTARD 339
>gi|209551132|ref|YP_002283049.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209536888|gb|ACI56823.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 307
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 151/276 (54%), Positives = 208/276 (75%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPKALRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++
Sbjct: 121 RVQETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
YAGLAS+M L+FLYM+GV FI+GAE+NA++I +
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALIKFR 276
>gi|239638059|ref|ZP_04679018.1| transporter [Staphylococcus warneri L37603]
gi|239596342|gb|EEQ78880.1| transporter [Staphylococcus warneri L37603]
Length = 411
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + ++D +A+ ++ +L++FP ++F L F Q + I + +
Sbjct: 71 NFFSYLVYRIGKDDASGLAAQMTYHFVLAMFPMLIFLLTLLPFFNIEQ---SQITNMLSS 127
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I V + GL ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 128 APSETSSIIKGVIGDVTKNSSGGLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 187
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V I + Y+ + + R+ ++ +
Sbjct: 188 LLKLLSVVFTVVMGVVFAIAMALPTLGSAISHYLFGPLGLDSEVKWVFNLIRVVLPLIII 247
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ I ++ P K+KI+S+LPG IFT I W++G+ F YI F YS Y +A I+
Sbjct: 248 LVLFIVLYSVAPNVKTKILSVLPGAIFTSIIWLLGSFAFGWYISNFGNYSKTYGSIAGII 307
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + + K
Sbjct: 308 ILLIWLYLTSFIIIIGAEINAIIHQRHVIK 337
>gi|295704377|ref|YP_003597452.1| putative ribonuclease BN [Bacillus megaterium DSM 319]
gi|294802036|gb|ADF39102.1| putative Ribonuclease BN [Bacillus megaterium DSM 319]
Length = 282
Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 119/254 (46%), Gaps = 2/254 (0%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ E+ +A+ + +LS+FP ++ ++ +L IDV+ P A
Sbjct: 13 KEIQEDQATGLAAEQAYYYMLSLFPMLILLISIVPYLSIKP--EEAIDVLQSVMPGETAA 70
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
D ++Q ++ P GL T+ L + +SNG+ A ++N+AY V E RS+ R +S
Sbjct: 71 IFKDNVVQFVSQPNGGLLTVGILGTIWSASNGMNAFIRAMNQAYDVKEQRSFIKVRGLSI 130
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+ VT+V+ + V + L ++ ++F +I+ R + + + L +
Sbjct: 131 LLTIGLIVTIVVSLLLPVFGGVLLNWISEWFSLPSGTTVILNVLRWIIGVGIMVLVLSVL 190
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P + PG + + W + ++ F+ Y+ F YS Y L ++ +++L+
Sbjct: 191 YRLAPNKTFPFAHVWPGALAATLLWQLTSLGFSFYVSNFGNYSATYGSLGGVIVLMLWLF 250
Query: 257 MLGVFFILGAELNA 270
+ G+ ++G E+NA
Sbjct: 251 LTGLILVIGGEINA 264
>gi|294499057|ref|YP_003562757.1| putative Ribonuclease BN [Bacillus megaterium QM B1551]
gi|294348994|gb|ADE69323.1| putative Ribonuclease BN [Bacillus megaterium QM B1551]
Length = 282
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 118/254 (46%), Gaps = 2/254 (0%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ E+ +A+ + +LS+FP ++ ++ +L ID++ P A
Sbjct: 13 KEIQEDQATGLAAEQAYYYMLSLFPMLILLISIVPYLSIKP--EEAIDLLQSVMPGETAA 70
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
D + Q ++ P GL T+ L + +SNG+ A ++N+AY V E RS+ R +S
Sbjct: 71 IFKDNVAQFVSQPNGGLLTVGILGTIWSASNGMNAFIRAMNQAYDVKEQRSFIKVRGLSI 130
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+ VT+V+ + V + L ++ ++F +++ R + + + L +
Sbjct: 131 LLTIGLIVTIVVSLLLPVFGGVLLNWISEWFSLPSGTTVVLNILRWIVGVGIMVLVLSVL 190
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ P + PG + + W + ++ F+ Y+ F YS Y L ++ +++L+
Sbjct: 191 YRLAPNKTFPFAHVWPGALAATLLWQLTSLGFSFYVSNFGNYSATYGSLGGVIVLMLWLF 250
Query: 257 MLGVFFILGAELNA 270
+ G+ ++G E+NA
Sbjct: 251 LTGLILVIGGEINA 264
>gi|116873142|ref|YP_849923.1| hypothetical protein lwe1726 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742020|emb|CAK21144.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 289
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNTLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ + T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTMSMLATVGATLLLLVFGQQIGMFLINHLHFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|254559558|ref|YP_003066653.1| ribonuclease BN [Methylobacterium extorquens DM4]
gi|254266836|emb|CAX22635.1| Ribonuclease BN [Methylobacterium extorquens DM4]
Length = 388
Score = 225 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 124/275 (45%), Gaps = 9/275 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI F ++ ++A+ ++ LLS+FP I G + + + + G
Sbjct: 95 WDIATRVYLEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLHG 154
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
PE + I +++ ++ + L F S + + ++ ++A+ +LN Y E
Sbjct: 155 VLPESAIEIIGEQVKRIATKGSGALGFTFFTSLTLSLWSANAAMKAMFDALNVVYEEEEK 214
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+++ + S + A + +++ V +P+ ++ LG+ +I R
Sbjct: 215 RNFFWLNVRSLTFTAGALLFIILALISIVVLPVVFNFL-----GLGDGARLIAMARWPML 269
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L L GL ++ + P+ +++ + G I + W++ ++LF+ Y+ F Y+ Y
Sbjct: 270 LLVLLGGLAVLYRYGPSRERARWRWVGAGSIVAGVLWLIASILFSWYVANFGNYNETYGS 329
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ + ++++ +LG E+NA + R
Sbjct: 330 LGAVIGFMTWIWISATIVLLGGEINAEIEHQTARD 364
>gi|116254049|ref|YP_769887.1| transmembrane ribonuclease protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115258697|emb|CAK09802.1| putative transmembrane ribonuclease protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 307
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 152/276 (55%), Positives = 210/276 (76%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R+WY TRL S GYVL+A + +S + VA+PLAL Y RK+FP + L I+++
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFTAISILLVALPLALDYSRKWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
YAGLAS+M L+FLYM+GV FI+GAE+NA++I +
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALIKFR 276
>gi|196040219|ref|ZP_03107521.1| YihY family protein [Bacillus cereus NVH0597-99]
gi|196029074|gb|EDX67679.1| YihY family protein [Bacillus cereus NVH0597-99]
Length = 289
Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKEIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|218663736|ref|ZP_03519666.1| putative ribonuclease protein [Rhizobium etli IE4771]
Length = 307
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 150/276 (54%), Positives = 208/276 (75%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R+WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLGIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
YAGLAS+M L+FLYM+G FI+GAE+NA++I +
Sbjct: 241 TYAGLASVMIVLIFLYMVGAIFIIGAEINAALIKFR 276
>gi|162456942|ref|YP_001619309.1| hypothetical protein sce8659 [Sorangium cellulosum 'So ce 56']
gi|161167524|emb|CAN98829.1| hypothetical protein sce8659 [Sorangium cellulosum 'So ce 56']
Length = 337
Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats.
Identities = 66/264 (25%), Positives = 130/264 (49%), Gaps = 7/264 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D + D + +++ +A+ ++ +L++FPF++F LAG + ++ ++
Sbjct: 12 DFLNDIKQECIKDKIDTIAASLAFFGVLAIFPFLLFAVALAGLVIDPAESAQLMSELYQV 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P +A + + + + + L T+ AL A + +S GV AL +LN AY V + RS+
Sbjct: 72 APPAVANILGERLQALTGGQSPALLTVGALGAVWAASGGVTALMDALNSAYGVEDKRSYL 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R I+ L +V L I S + VA P A+ LG ++ R+ + L +
Sbjct: 132 KRRGIALLVTLGGAVLLTIASALAVATPALAAH-------LGPFATLVLWLRMPVSALIV 184
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ LP + + I PG + + WV+ ++ F+ Y+ F +Y Y L ++
Sbjct: 185 MVVLATLYYLLPDVEQQFKFITPGSVVAVVIWVLASLGFSFYVSRFGSYEVSYGALGGVI 244
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L+++++ + +LGAE+NA +
Sbjct: 245 ILLLWMWISSLAVLLGAEINAIIE 268
>gi|241206535|ref|YP_002977631.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860425|gb|ACS58092.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 307
Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats.
Identities = 152/276 (55%), Positives = 210/276 (76%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R+WY TRL S GYVL+A + +S + VA+PLAL Y RK+FP + L I+++
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFTAISILLVALPLALDYSRKWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
YAGLAS+M L+FLYM+GV FI+GAE+NA++I +
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALIKFR 276
>gi|150397725|ref|YP_001328192.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
gi|150029240|gb|ABR61357.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
Length = 290
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 141/275 (51%), Positives = 195/275 (70%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
I++ +++DA+ HF E+DGWAMASH++LS+L++VFPF++FG LA FLGA QF T +
Sbjct: 3 VIRIIWKVVFDALWHFSEDDGWAMASHVALSSLMAVFPFLIFGTALASFLGADQFAETAV 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++F WPE IAKP+ DE+++VL +P L TIS LAAAYF+SNGVEALRI+LNRAYRV
Sbjct: 63 HLIFDTWPESIAKPVADEVVRVLTIPRGSLLTISVLAAAYFASNGVEALRIALNRAYRVA 122
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RSWY+TRL S G+VL A + L +S + VA+PLA+ ++FP L ++ + + +
Sbjct: 123 ESRSWYVTRLSSLGFVLGAVLILAALSLLLVAVPLAVRNADQWFPWLDTVMAAVDDWGLT 182
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+ L GL+ HL+LP+ I+ +LPG+ T + W VG F YI FS+Y+T YA
Sbjct: 183 LTLAMLTAGLLVAHLWLPSGHRNIVDVLPGIFLTLVLWSVGGYAFASYIANFSSYATTYA 242
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
GLASIM LVFLYMLG FI+GAE+NA+++ Y +
Sbjct: 243 GLASIMVVLVFLYMLGAIFIIGAEINAAILKYKVK 277
>gi|269125476|ref|YP_003298846.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
gi|268310434|gb|ACY96808.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
Length = 445
Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 5/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ F E++ A+ ++ A+LS+FP ++ +L G LG ++I V
Sbjct: 140 DLLKRTFREFKEDNLTDWAAALTYYAVLSIFPAMLVIISLIG-LGGASLSESIIRNVGDL 198
Query: 70 WPEVIAKPITDEILQV-LAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + + ++ A GL I +AA + +S V A + N Y + E R
Sbjct: 199 APGAVRDVLATALTELQRGAGAAGLVAVIGLVAAVWSASGYVAAFMRASNAIYDLPEGRP 258
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ T I L+ S+TL+ S + V I LA LG+ + +WN + +
Sbjct: 259 IWKTLPIRIAVTLV-SLTLLSASAIAVVISGPLARKAGDLLGLGDAAVTVWNIAKWPVLL 317
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+A+ ++ P AK + PG + W++ +V F Y+ F +Y+ Y LA
Sbjct: 318 VAIAFLFALLYWASPNAKRGFTWVTPGGLLALAVWLLASVGFAFYVANFGSYNKTYGSLA 377
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG ELNA +
Sbjct: 378 GVIIFLVWLWISNIALLLGVELNAELQRAR 407
>gi|301052124|ref|YP_003790335.1| putative ribonuclease BN [Bacillus anthracis CI]
gi|300374293|gb|ADK03197.1| probable ribonuclease BN [Bacillus cereus biovar anthracis str. CI]
Length = 289
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKVIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|222149946|ref|YP_002550903.1| ribonuclease transmembrane protein [Agrobacterium vitis S4]
gi|221736928|gb|ACM37891.1| ribonuclease transmembrane protein [Agrobacterium vitis S4]
Length = 298
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 138/279 (49%), Positives = 201/279 (72%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR Y ++ + +DA+ HF E+DGWAMASH++LS LL+VFPF++FG LAG LGA+ F P
Sbjct: 1 MRSYLGRLYKVAFDAVWHFTEDDGWAMASHVALSILLAVFPFLIFGTALAGLLGANTFAP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I +F WPE IAKPI+++++QVL +P GL TIS LAAAYF+SNGVEALR +LNRAY
Sbjct: 61 TAIHFIFDTWPEEIAKPISEQVVQVLTIPRGGLLTISVLAAAYFASNGVEALRTALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WYITRLIS G+V++ ++S + +A+P+AL + + FP L + L ++ N
Sbjct: 121 RVTETRPWYITRLISLGFVIMGVAAFAVISVLLIAVPIALRFAERQFPLLKDFLALVSNW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T++ L +GL HL+LPA + +++ +LPG+ T + W++GA+ F Y+ TF+ Y+
Sbjct: 181 SVLGTLILLAVGLTISHLWLPADRRRLIDVLPGICLTLLLWLLGALAFAAYLATFANYAA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M ++FLYMLGV F++GAE NA+++ + +
Sbjct: 241 TYAGLASVMVVIIFLYMLGVLFLIGAEFNAALMKFSRPR 279
>gi|229165407|ref|ZP_04293191.1| YihY [Bacillus cereus AH621]
gi|228618005|gb|EEK75046.1| YihY [Bacillus cereus AH621]
Length = 288
Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLLEV 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPDDAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKALGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|315444784|ref|YP_004077663.1| hypothetical protein Mspyr1_32120 [Mycobacterium sp. Spyr1]
gi|315263087|gb|ADT99828.1| predicted membrane protein [Mycobacterium sp. Spyr1]
Length = 401
Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 116/268 (43%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
++ F + +A+ ++ A+LS+FP +V +L G +G + V+ +V
Sbjct: 78 VLRKTAREFTHDQCTDLAAALTYYAVLSLFPALVVVMSLLGVIGQSERTADAVLGIVDDV 137
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + I Q++ P+ GL + + A + +S V A ++NR Y V E R
Sbjct: 138 SPGAAVDVLREPIQQLVNAPSAGLTLVLGIVGALWSASGFVGAFGRAMNRIYEVEEGRPG 197
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ RL L+ + + + V + +G L +WN R ++
Sbjct: 198 WKLRLQQLFLTLVGLIVAATAALLLAVSGPVAEAVGGYL-GVGATGLTVWNITRWPLLLV 256
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ G+ ++ P + K I G ++WV ++ F Y+ F Y+ + LA
Sbjct: 257 LVVFGVAMLYYVSPNVRQPKFRWISVGAAIAIVTWVCASLGFGFYVANFGNYNKTFGTLA 316
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L++ + + GAE++A +
Sbjct: 317 GVIVFLLWLWLTNLALLFGAEVDAELER 344
>gi|218530643|ref|YP_002421459.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|218522946|gb|ACK83531.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 397
Score = 223 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 118/268 (44%), Gaps = 9/268 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E +++ ++ LL++FP I ++ G + + I+ + G
Sbjct: 105 DVLKRTYRDIGENRLTLVSAGVTFFVLLAIFPAIAALVSVYGLIADVSTINHQIEALRGV 164
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ ++ L I + + ++ GV+ + +LN Y E R
Sbjct: 165 LPSGGVDIVAEQVKRLTEKGDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQR 224
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L+S + A + +V+ VA+P+A+ ++ L + R
Sbjct: 225 GFFKLNLVSLAFTAGALLFVVLALAGIVAVPVAIQFL-----GLSGDAWWLALLRWPILF 279
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ + P+ + + + PG +F W+ G++LF+ Y+ F +Y Y L
Sbjct: 280 VIVILMLAVLYRYGPSRDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSL 339
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + ++++ +LGA+LNA +
Sbjct: 340 GAAIGFMTWIWLSTTIVLLGAQLNAELE 367
>gi|145224451|ref|YP_001135129.1| putative ribonuclease BN [Mycobacterium gilvum PYR-GCK]
gi|145216937|gb|ABP46341.1| putative ribonuclease BN [Mycobacterium gilvum PYR-GCK]
Length = 401
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 116/268 (43%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
++ F + +A+ ++ A+LS+FP +V +L G +G + V+ +V
Sbjct: 78 VLRKTAREFTHDQCTDLAAALTYYAVLSLFPALVVVMSLLGVIGQSERTADAVLGIVDDV 137
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + I Q++ P+ GL + + A + +S V A ++NR Y V E R
Sbjct: 138 SPGAAVDVLREPIQQLVNAPSAGLTLVLGIVGALWSASGFVGAFGRAMNRIYEVEEGRPG 197
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ RL L+ + + + V + +G L +WN R ++
Sbjct: 198 WKLRLQQLFLTLVGLIVAATAALLLAVSGPVAEAVGGYL-GVGATGLTVWNIARWPLLLV 256
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ G+ ++ P + K I G ++WV ++ F Y+ F Y+ + LA
Sbjct: 257 LVVFGVAMLYYVSPNVRQPKFRWISVGAAIAIVTWVCASLGFGFYVANFGNYNKTFGTLA 316
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L++ + + GAE++A +
Sbjct: 317 GVIVFLLWLWLTNLALLFGAEVDAELER 344
>gi|229492024|ref|ZP_04385838.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
gi|229321048|gb|EEN86855.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
Length = 516
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ F + +A+ ++ A+LS+FP I+ +L G G V V+ +V
Sbjct: 33 VLRSTARQFSRDQCTDLAAALTYYAVLSLFPAILAVVSLLGVFGQGQSTVDAVLQIVGAL 92
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALA-AAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + I Q++ PA G I+ +A A + +S V A ++NR Y V E R
Sbjct: 93 GPSSAVDTLRGPIQQLVQAPAAGFALIAGIAGALWSASGYVGAFGRAMNRMYEVDEGRPV 152
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ R + ++ ++TL+ + +AI +A G+ L +WN R ++
Sbjct: 153 WKLRPVMLLVTIV-ALTLIGCAAAMLAISGPVARAIGDVIGAGDTALTVWNIARWPVVLV 211
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + ++ P + K I G + W++ +V F Y+ FS+Y+ Y LA
Sbjct: 212 FVVLAVAILYYATPNIQQPKFRWISGGAALAIVVWILASVGFGFYVANFSSYNKTYGSLA 271
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
+ L++L++ + + GAEL++ +
Sbjct: 272 GAIVFLLWLWITNLALLFGAELDSELER 299
>gi|240139015|ref|YP_002963490.1| Ribonuclease BN family protein [Methylobacterium extorquens AM1]
gi|240008987|gb|ACS40213.1| Ribonuclease BN family protein [Methylobacterium extorquens AM1]
Length = 397
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 118/268 (44%), Gaps = 9/268 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E +++ ++ LL++FP I ++ G + + I+ + G
Sbjct: 105 DVLKRTYRDIGENRLTLVSAGVTFFVLLAIFPAIAALVSVYGLIADVSTINHQIEALRGV 164
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ ++ L I + + ++ GV+ + +LN Y E R
Sbjct: 165 LPSGGVDIVAEQVKRLTEKGDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQR 224
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L+S + A + +V+ VA+P+A+ ++ L + R
Sbjct: 225 GFFKLNLVSLAFTAGALLFVVLALAGIVAVPVAIQFL-----GLSGDAWWLALLRWPILF 279
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ + P+ + + + PG +F W+ G++LF+ Y+ F +Y Y L
Sbjct: 280 VIVILMLAVLYRYGPSRDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSL 339
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + ++++ +LGA+LNA +
Sbjct: 340 GAAIGFMTWIWLSTTIVLLGAQLNAELE 367
>gi|254561610|ref|YP_003068705.1| ribonuclease BN family protein [Methylobacterium extorquens DM4]
gi|254268888|emb|CAX24849.1| Ribonuclease BN family protein [Methylobacterium extorquens DM4]
Length = 397
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 118/268 (44%), Gaps = 9/268 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E +++ ++ LL++FP I ++ G + + I+ + G
Sbjct: 105 DVLKRTYRDIGENRLTLVSAGVTFFVLLAIFPAIAALVSVYGLIADVSTINHQIEALRGV 164
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ ++ L I + + ++ GV+ + +LN Y E R
Sbjct: 165 LPSGGVDIVAEQVKRLTEKGDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQR 224
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L+S + A + +V+ VA+P+A+ ++ L + R
Sbjct: 225 GFFKLNLVSLAFTAGALLFVVLALAGIVAVPVAIQFL-----GLSGDAWWLALLRWPILF 279
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ + P+ + + + PG +F W+ G++LF+ Y+ F +Y Y L
Sbjct: 280 VIVILMLAVLYRYGPSRDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSL 339
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + ++++ +LGA+LNA +
Sbjct: 340 GAAIGFMTWIWLSTTIVLLGAQLNAELE 367
>gi|224476940|ref|YP_002634546.1| hypothetical protein Sca_1456 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421547|emb|CAL28361.1| hypothetical protein SCA_1456 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 358
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 57/271 (21%), Positives = 122/271 (45%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ I ++D +A+ +S +LS+FP ++F +L + +++++
Sbjct: 68 NLLSYLIYRIGKDDASGLAAQLSYYFMLSLFPMLLFLMSLLPLFKIDR--DKIVNMIANN 125
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A +T I ++ + + ++ + A + +SNG+ AL + N AY V + R+
Sbjct: 126 APASTADLLTGIIGDIMKNASGSILSVGLILALWSASNGMTALMNAFNVAYDVEDGRNPI 185
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +LIS + ++ + V + + I + +
Sbjct: 186 VLKLISVLFTVIMGAVFIAAMIFPVFGQQIGHLLFGPLGLDSQIKWIFNILSYALPFVVI 245
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ + ++ P K K+ S++PG +F + W++G F Y+ F+ YS Y + I+
Sbjct: 246 FLLFVTLYTLAPNIKIKMKSVIPGALFASVVWILGTAAFGLYVSNFANYSKTYGSIGGII 305
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++LY+ G I+GAE+NA + K
Sbjct: 306 VLMLWLYITGFIIIVGAEINAIINQRRTLKN 336
>gi|163851892|ref|YP_001639935.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|163663497|gb|ABY30864.1| ribonuclease BN [Methylobacterium extorquens PA1]
Length = 397
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 118/268 (44%), Gaps = 9/268 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E +++ ++ LL++FP I ++ G + + I+ + G
Sbjct: 105 DVLKRTYRDIGENRLTLVSAGVTFFVLLAIFPAIAALVSVYGLIADVSTINHQIEALRGV 164
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ ++ L I + + ++ GV+ + +LN Y E R
Sbjct: 165 LPSGGVDIVAEQVKRLTEKGDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQR 224
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L+S + A + +V+ VA+P+A+ ++ L + R
Sbjct: 225 GFFKLNLVSLAFTAGALLFVVLALAGIVAVPVAIQFL-----GLSGDAWWLALLRWPILF 279
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ + P+ + + + PG +F W+ G++LF+ Y+ F +Y Y L
Sbjct: 280 VIVILMLAVLYRYGPSRDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSL 339
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + ++++ +LGA+LNA +
Sbjct: 340 GAAIGFMTWIWLSTTIVLLGAQLNAELE 367
>gi|47567234|ref|ZP_00237948.1| ribonuclease BN, putative [Bacillus cereus G9241]
gi|228983665|ref|ZP_04143867.1| YihY [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|47556077|gb|EAL14414.1| ribonuclease BN, putative [Bacillus cereus G9241]
gi|228776072|gb|EEM24436.1| YihY [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 289
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMSLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|228989594|ref|ZP_04149578.1| YihY [Bacillus pseudomycoides DSM 12442]
gi|228770131|gb|EEM18711.1| YihY [Bacillus pseudomycoides DSM 12442]
Length = 289
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 2/269 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+ D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++
Sbjct: 13 VYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLLE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS
Sbjct: 71 AYVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSTLWFASNGVNAVMNAFNRAYDVKETRS 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ TR +S L +V V V + A V K + + R+ A+ L
Sbjct: 131 FIATRALSIVLTLAMIFMIVFALIVPVFGQVIGAAVFKALGLSESFSFVWSIIRLVASFL 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 191 VLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ +LG E+N + Y
Sbjct: 251 IIILMLWFYLTAWVILLGGEINGLLHFYR 279
>gi|30260576|ref|NP_842953.1| ribonuclease BN, putative [Bacillus anthracis str. Ames]
gi|42779603|ref|NP_976850.1| ribonuclease BN, putative [Bacillus cereus ATCC 10987]
gi|47525680|ref|YP_017029.1| ribonuclease BN [Bacillus anthracis str. 'Ames Ancestor']
gi|49183423|ref|YP_026675.1| ribonuclease BN [Bacillus anthracis str. Sterne]
gi|49480098|ref|YP_034736.1| ribonuclease BN [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52144837|ref|YP_081992.1| ribonuclease BN [Bacillus cereus E33L]
gi|65317837|ref|ZP_00390796.1| COG1295: Predicted membrane protein [Bacillus anthracis str. A2012]
gi|165870787|ref|ZP_02215440.1| YihY family protein [Bacillus anthracis str. A0488]
gi|167634706|ref|ZP_02393025.1| YihY family protein [Bacillus anthracis str. A0442]
gi|167641273|ref|ZP_02399526.1| YihY family protein [Bacillus anthracis str. A0193]
gi|170688965|ref|ZP_02880166.1| YihY family protein [Bacillus anthracis str. A0465]
gi|170707108|ref|ZP_02897564.1| YihY family protein [Bacillus anthracis str. A0389]
gi|177654535|ref|ZP_02936391.1| YihY family protein [Bacillus anthracis str. A0174]
gi|190567539|ref|ZP_03020452.1| YihY family protein [Bacillus anthracis Tsiankovskii-I]
gi|217958004|ref|YP_002336548.1| YihY family protein [Bacillus cereus AH187]
gi|222094204|ref|YP_002528261.1| ribonuclease bn [Bacillus cereus Q1]
gi|227813080|ref|YP_002813089.1| YihY family protein [Bacillus anthracis str. CDC 684]
gi|228913156|ref|ZP_04076795.1| YihY [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229089528|ref|ZP_04220797.1| YihY [Bacillus cereus Rock3-42]
gi|229137270|ref|ZP_04265886.1| YihY [Bacillus cereus BDRD-ST26]
gi|229194786|ref|ZP_04321574.1| YihY [Bacillus cereus m1293]
gi|229604696|ref|YP_002865023.1| YihY family protein [Bacillus anthracis str. A0248]
gi|254686797|ref|ZP_05150655.1| YihY family protein [Bacillus anthracis str. CNEVA-9066]
gi|254724872|ref|ZP_05186655.1| YihY family protein [Bacillus anthracis str. A1055]
gi|254738978|ref|ZP_05196680.1| YihY family protein [Bacillus anthracis str. Western North America
USA6153]
gi|254744565|ref|ZP_05202244.1| YihY family protein [Bacillus anthracis str. Kruger B]
gi|254756177|ref|ZP_05208206.1| YihY family protein [Bacillus anthracis str. Vollum]
gi|254761995|ref|ZP_05213844.1| YihY family protein [Bacillus anthracis str. Australia 94]
gi|300119033|ref|ZP_07056744.1| YihY family protein [Bacillus cereus SJ1]
gi|4584097|emb|CAB40586.1| yfkH [Bacillus cereus ATCC 10987]
gi|30253944|gb|AAP24439.1| YihY family protein [Bacillus anthracis str. Ames]
gi|42735519|gb|AAS39458.1| ribonuclease BN, putative [Bacillus cereus ATCC 10987]
gi|47500828|gb|AAT29504.1| YihY family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49177350|gb|AAT52726.1| ribonuclease BN, putative [Bacillus anthracis str. Sterne]
gi|49331654|gb|AAT62300.1| probable ribonuclease BN [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51978306|gb|AAU19856.1| probable ribonuclease BN [Bacillus cereus E33L]
gi|164713621|gb|EDR19145.1| YihY family protein [Bacillus anthracis str. A0488]
gi|167510781|gb|EDR86174.1| YihY family protein [Bacillus anthracis str. A0193]
gi|167529780|gb|EDR92528.1| YihY family protein [Bacillus anthracis str. A0442]
gi|170127886|gb|EDS96757.1| YihY family protein [Bacillus anthracis str. A0389]
gi|170667066|gb|EDT17828.1| YihY family protein [Bacillus anthracis str. A0465]
gi|172080647|gb|EDT65730.1| YihY family protein [Bacillus anthracis str. A0174]
gi|190561326|gb|EDV15298.1| YihY family protein [Bacillus anthracis Tsiankovskii-I]
gi|217067694|gb|ACJ81944.1| YihY family protein [Bacillus cereus AH187]
gi|221238259|gb|ACM10969.1| probable ribonuclease BN [Bacillus cereus Q1]
gi|227003880|gb|ACP13623.1| YihY family protein [Bacillus anthracis str. CDC 684]
gi|228588697|gb|EEK46727.1| YihY [Bacillus cereus m1293]
gi|228646173|gb|EEL02391.1| YihY [Bacillus cereus BDRD-ST26]
gi|228693835|gb|EEL47529.1| YihY [Bacillus cereus Rock3-42]
gi|228846561|gb|EEM91574.1| YihY [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229269104|gb|ACQ50741.1| YihY family protein [Bacillus anthracis str. A0248]
gi|298723649|gb|EFI64380.1| YihY family protein [Bacillus cereus SJ1]
gi|324324508|gb|ADY19768.1| YihY family protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 289
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|229154172|ref|ZP_04282296.1| YihY [Bacillus cereus ATCC 4342]
gi|228629308|gb|EEK86011.1| YihY [Bacillus cereus ATCC 4342]
Length = 289
Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMSLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRKEVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|228995781|ref|ZP_04155441.1| YihY [Bacillus mycoides Rock3-17]
gi|229003401|ref|ZP_04161222.1| YihY [Bacillus mycoides Rock1-4]
gi|228757849|gb|EEM07073.1| YihY [Bacillus mycoides Rock1-4]
gi|228763942|gb|EEM12829.1| YihY [Bacillus mycoides Rock3-17]
Length = 289
Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 2/269 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+ D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++
Sbjct: 13 VYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLLE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS
Sbjct: 71 AYVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSTLWFASNGVNAVMNAFNRAYDVKETRS 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ TR +S L +V V V + A V K + + R+ A+ L
Sbjct: 131 FIATRALSIVLTLAMIFMIVFALIVPVFGQVIGAAVFKALGLSESFSFVWSIIRLVASFL 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 191 VLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ +LG E+N + Y
Sbjct: 251 IIILMLWFYLTAWVILLGGEINGLLHFYR 279
>gi|229171254|ref|ZP_04298844.1| YihY [Bacillus cereus MM3]
gi|228612211|gb|EEK69443.1| YihY [Bacillus cereus MM3]
Length = 289
Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G IF + W++ + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGAIFATVGWIMVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|229015792|ref|ZP_04172770.1| YihY [Bacillus cereus AH1273]
gi|229022000|ref|ZP_04178557.1| YihY [Bacillus cereus AH1272]
gi|228739306|gb|EEL89745.1| YihY [Bacillus cereus AH1272]
gi|228745508|gb|EEL95532.1| YihY [Bacillus cereus AH1273]
Length = 289
Score = 222 bits (567), Expect = 4e-56, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 FSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|307942625|ref|ZP_07657973.1| YihY family protein [Roseibium sp. TrichSKD4]
gi|307774264|gb|EFO33477.1| YihY family protein [Roseibium sp. TrichSKD4]
Length = 284
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 124/275 (45%), Positives = 167/275 (60%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ DA+ HFV +DG+AMASH++LSALL+VFP ++F A LAGF+G H
Sbjct: 5 RTITTTYLVLKDALGHFVNDDGYAMASHVALSALLAVFPLLIFIAALAGFMGFHDAADRA 64
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++VF AWPE +AKP+ DEI +VL VP L T + A +F+SNGVEA+R +LNRAYR
Sbjct: 65 SNLVFDAWPENVAKPLVDEIHRVLTVPRGDLLTFGVVGALWFASNGVEAMRSALNRAYRQ 124
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS RL S G V+L +V L+ +F+ V PL + V + PA L+ I R
Sbjct: 125 QEKRSIVFLRLQSLGLVILGAVVLIAYTFLVVLAPLVIKTVVNWIPAAEEFLVTIDVARY 184
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L IGL+ H LP+ K +LPGV+ T + W+V +F Y+ F+TY T Y
Sbjct: 185 SVAGSLLTIGLLLTHWILPSGSRKFRELLPGVVATLVMWMVAGAVFGAYLAKFATYVTTY 244
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
GLA IM+ +VFLY+ + FILG ELNASMI
Sbjct: 245 GGLAGIMSAVVFLYICSLGFILGGELNASMIRLRR 279
>gi|196034774|ref|ZP_03102182.1| YihY family protein [Bacillus cereus W]
gi|218901611|ref|YP_002449445.1| YihY family protein [Bacillus cereus AH820]
gi|228925661|ref|ZP_04088749.1| YihY [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228931903|ref|ZP_04094798.1| YihY [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228944214|ref|ZP_04106592.1| YihY [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|229120067|ref|ZP_04249321.1| YihY [Bacillus cereus 95/8201]
gi|195992817|gb|EDX56777.1| YihY family protein [Bacillus cereus W]
gi|218539779|gb|ACK92177.1| YihY family protein [Bacillus cereus AH820]
gi|228663386|gb|EEL18972.1| YihY [Bacillus cereus 95/8201]
gi|228815464|gb|EEM61707.1| YihY [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228827757|gb|EEM73496.1| YihY [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228833997|gb|EEM79546.1| YihY [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 286
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 7/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V+D++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLDLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
TR +S + L +V V V + A + L + W+ R+ ++
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALLVPVFGQVIGAEII----GLSDTYSYAWSVTRLVSSFF 187
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF F++ F P K K ++ G +F I W+V + F +Y+ F+ Y+ Y GL
Sbjct: 188 VLFALFSFLYTFAPDRKLKRREVVSGALFATIGWIVVSYSFAYYVDKFANYANTYGGLGG 247
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 248 IIVLMLWFYLTGWVILLGGEINGLLHHYR 276
>gi|254472479|ref|ZP_05085879.1| YihY family protein [Pseudovibrio sp. JE062]
gi|211958762|gb|EEA93962.1| YihY family protein [Pseudovibrio sp. JE062]
Length = 296
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 102/269 (37%), Positives = 161/269 (59%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA+ HF +DG+A+ASH++LS+L+++FPF++F A +GFLG + + +++F
Sbjct: 11 YQVLADALGHFNSDDGYAVASHVALSSLMALFPFLIFVAAFSGFLGLNSVAQSATELIFD 70
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
WPE +A P++ EI VL P L T + +FSSNGVEA+R+ LNRAYRV + RSW
Sbjct: 71 VWPERVAGPVSGEIKAVLTQPRGDLLTFGVVVTLWFSSNGVEAMRVGLNRAYRVRDNRSW 130
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R S VL+ + L++ +F+ V PLA + P + R T L
Sbjct: 131 FFCRTQSILAVLIGTAVLMVSTFLIVFGPLAWEWAVHLAPVMEKFSYKANIVRYGITSLL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L+ H++LPA + + + +LPG+ T I W+V F Y+ ++ Y ++YAGLA I
Sbjct: 191 LLFALLAAHMYLPAGRRRFLEVLPGIALTMILWIVAGTAFGAYLARWANYVSLYAGLAGI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
MT ++F+Y+ V FILG E NA+++
Sbjct: 251 MTAIIFMYLTAVIFILGGEFNAALMRVRR 279
>gi|297625291|ref|YP_003687054.1| tRNA processing ribonuclease BN [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921056|emb|CBL55594.1| TRNA processing ribonuclease BN [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 364
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ I F + +A+ ++ A+LS+FP ++ +L G +G V+ ++
Sbjct: 35 VLRKTIREFSSDQCTDIAASLTYYAVLSLFPCLIAIFSLLGVVGQGKAASDAVLGIIEQV 94
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I I Q+ P G I L A + +S V A ++NR Y + E R +
Sbjct: 95 APGDTVDTIRGPIEQIAESPGAGFALITGILLAIWSASGYVGAFSRAMNRIYEIEEGRPF 154
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + ++ V LVI + + V + +G++ IW+ + +
Sbjct: 155 WKLKPAQLLVTVITIVLLVIAAIILVVSGDVTKAIGDAL-GIGDVPQTIWSIAKWPLLIF 213
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ P AK K I G + I + F Y+ FS Y Y LA
Sbjct: 214 IAVLVVAILYYATPNAKQPKFRWISMGALLAIIVLALATAAFGFYVGNFSNYDRTYGSLA 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L++ + + GAE +A +
Sbjct: 274 GVIIFLLWLWIANLALLFGAEFDAELER 301
>gi|229028258|ref|ZP_04184396.1| YihY [Bacillus cereus AH1271]
gi|228733064|gb|EEL83908.1| YihY [Bacillus cereus AH1271]
Length = 289
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSIMRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|152974229|ref|YP_001373746.1| putative ribonuclease BN [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152022981|gb|ABS20751.1| putative ribonuclease BN [Bacillus cytotoxicus NVH 391-98]
Length = 289
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 2/269 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+ D + + +D +A+ ++ LL++FP +VF L GF+ V++++
Sbjct: 13 VYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFVITLLGFIDLQ--TENVLNLLE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + QV+ GL + L+ +F+SNGV A+ + NRAY V E RS
Sbjct: 71 PYVPEEAMNLIEVNVDQVINNQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRS 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +TR +S + L +V V V + A V K + + R+ A+ L
Sbjct: 131 FIVTRALSIVFTLAMIFMIVFALIVPVFGQVIGAAVFKVLGLSESFSFVWSIIRLVASFL 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 191 VLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ +LG E+N + Y
Sbjct: 251 IIILMLWFYLTAWVILLGGEINGLLYFYR 279
>gi|118476162|ref|YP_893313.1| ribonuclease BN [Bacillus thuringiensis str. Al Hakam]
gi|196045195|ref|ZP_03112427.1| YihY family protein [Bacillus cereus 03BB108]
gi|225862450|ref|YP_002747828.1| YihY family protein [Bacillus cereus 03BB102]
gi|229182794|ref|ZP_04310033.1| YihY [Bacillus cereus BGSC 6E1]
gi|118415387|gb|ABK83806.1| ribonuclease BN [Bacillus thuringiensis str. Al Hakam]
gi|196023779|gb|EDX62454.1| YihY family protein [Bacillus cereus 03BB108]
gi|225790204|gb|ACO30421.1| YihY family protein [Bacillus cereus 03BB102]
gi|228600674|gb|EEK58255.1| YihY [Bacillus cereus BGSC 6E1]
Length = 289
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFIYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|226362631|ref|YP_002780409.1| ribonuclease [Rhodococcus opacus B4]
gi|226241116|dbj|BAH51464.1| putative ribonuclease [Rhodococcus opacus B4]
Length = 363
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 61/271 (22%), Positives = 126/271 (46%), Gaps = 7/271 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVF 67
+ +I F ++ +A+ ++ A+LS+FP ++ +L G G Q TV+ +V
Sbjct: 29 WYVIRKTAHEFTRDECTDLAAALTYYAVLSLFPALLAMVSLLGVFGQGQRTTDTVLQIVD 88
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D I Q++ P+ G + L A + +S + A ++NR Y V E R
Sbjct: 89 DLGPSSAVDTLRDPITQLVQTPSAGAALILGLLGAVWSASGYIGAFGRAMNRIYEVEEGR 148
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWNG-RIYA 184
+ R + L+ V + + + + ++ P+A + G+ L +WN R
Sbjct: 149 PVWKLRPLQLLVTLVGLVLVALAALMLAISGPVARSVGDAI--GFGDTALTVWNIARWPF 206
Query: 185 TMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + + ++ P + K + G + ++W++ +VLF Y+ F +Y+ Y
Sbjct: 207 ILGVVIVAVAILYYVTPNVQQPKFRWVSAGALVGIVTWILVSVLFGLYVSNFGSYNKTYG 266
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA ++ L++L++ + + GAEL+A +
Sbjct: 267 SLAGVIVFLLWLWITNLALLFGAELDAELER 297
>gi|329940661|ref|ZP_08289942.1| ribonuclease [Streptomyces griseoaurantiacus M045]
gi|329300722|gb|EGG44619.1| ribonuclease [Streptomyces griseoaurantiacus M045]
Length = 393
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 110/271 (40%), Gaps = 6/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F ++ A+ ++ +LS+FP ++ + G G ++D V
Sbjct: 88 EVFKGTLREFKNDELTDRAAALTYYGVLSLFPALLVLVSFLGMTG-KSTTDKLLDQVDSL 146
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + +T + Q+ G + + A + +S + A + N Y V E R
Sbjct: 147 APGSASDIVTKAVRQLQDNGGTGSIMAVVGIVLALWSASGYIAAFIRTANAVYDVPEGRP 206
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ + ++ V +I S + V LG+ L +W+ + +
Sbjct: 207 VWKVLPLRLAVTVVLMVLAIISSCIVVFTGGIAKRAGDAL-GLGDTALTVWSIAKWPVLV 265
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + I + ++ P AK + I PG + + W+V + F Y+ F +Y+ Y +
Sbjct: 266 ILVTIMIAILYWSTPNAKVRGFRWITPGSLLALLIWLVASAGFAFYVANFGSYNKTYGTM 325
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A ++ LV+L++ + +LG E +A
Sbjct: 326 AGVIVFLVWLWISNLAILLGLEFDAETARQR 356
>gi|262202449|ref|YP_003273657.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
gi|262085796|gb|ACY21764.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
Length = 349
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 5/271 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVV 66
V+ I F + +A+ ++ A+LS+FP ++ +L G G Q V V+ +V
Sbjct: 28 VWYITRKVAREFSRDQCTDLAAALTYYAVLSLFPALLAVVSLLGVFGQGQRTVDAVLQMV 87
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + D + Q+++ P+ G + A + +S V A ++NR Y + E
Sbjct: 88 DDVGPSSAVDTLRDPVQQLVSAPSAGFALVLGLAGALWSASGYVGAFGRAMNRMYEIDEG 147
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYA 184
R + R + ++ + V +AI +A G+ L +WN R
Sbjct: 148 RPIWKLRPQMLLVTAV-ALLMAGAIAVMLAISGPVAKAVGDAIGAGDAALTVWNIARWPL 206
Query: 185 TMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + + ++ P K K I G + W++ +VLF Y+ FS+Y+ Y
Sbjct: 207 VLIFAILVVAILYYSTPNVKQPKFRWISIGATVAIVVWILASVLFGLYVANFSSYNKTYG 266
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA ++ L++L++ + + GAE++A ++
Sbjct: 267 ALAGVVVFLLWLWITNLALLFGAEIDAELVR 297
>gi|228906214|ref|ZP_04070101.1| YihY [Bacillus thuringiensis IBL 200]
gi|228919337|ref|ZP_04082707.1| YihY [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228956886|ref|ZP_04118667.1| YihY [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228963518|ref|ZP_04124675.1| YihY [Bacillus thuringiensis serovar sotto str. T04001]
gi|228796212|gb|EEM43663.1| YihY [Bacillus thuringiensis serovar sotto str. T04001]
gi|228802729|gb|EEM49565.1| YihY [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228840444|gb|EEM85715.1| YihY [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228853370|gb|EEM98140.1| YihY [Bacillus thuringiensis IBL 200]
Length = 289
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLLEV 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPDDAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 ITTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKALGLSDSFSFVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|163938399|ref|YP_001643283.1| putative ribonuclease BN [Bacillus weihenstephanensis KBAB4]
gi|229056246|ref|ZP_04195667.1| YihY [Bacillus cereus AH603]
gi|163860596|gb|ABY41655.1| putative ribonuclease BN [Bacillus weihenstephanensis KBAB4]
gi|228721051|gb|EEL72589.1| YihY [Bacillus cereus AH603]
Length = 289
Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 FSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L F++ F P K K ++ G IF + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LIALFSFLYTFAPDRKLKRREVISGAIFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ +LG E+N + Y
Sbjct: 252 IILMLWFYLTAWVILLGGEINGLLHHYR 279
>gi|229131406|ref|ZP_04260303.1| YihY [Bacillus cereus BDRD-ST196]
gi|228652052|gb|EEL07992.1| YihY [Bacillus cereus BDRD-ST196]
Length = 289
Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 FSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L F++ F P K K ++ G IF + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LIALFSFLYTFAPDRKLKRREVISGAIFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ +LG E+N + Y
Sbjct: 252 IILMLWFYLTAWVILLGGEINGLLHHYR 279
>gi|296114390|ref|ZP_06833044.1| ribonuclease BN [Gluconacetobacter hansenii ATCC 23769]
gi|295979151|gb|EFG85875.1| ribonuclease BN [Gluconacetobacter hansenii ATCC 23769]
Length = 397
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 120/277 (43%), Gaps = 7/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ + + A+ + A LS+FP + ++ G L Q V + V
Sbjct: 82 RHILPVMKQVATNIASDQITLAAAGCAFYATLSLFPAMSTMISIYGLLFDPQTVEPQLVV 141
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I D I ++A L +S A + +S +L +++N AY
Sbjct: 142 LRNLLPPAAYDLICDRIHVLVAQSHSSLTLNLIVSTTIAMWSASAATRSLLLAMNVAYNT 201
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF---PALGNLLLIIWN 179
E RS+ + + L A ++ + VA+P+ L Y+ + P G+L L++
Sbjct: 202 PETRSFLRFQAMGMIMTLCAICGGILTLALMVALPILLDYLPQKLSLAPPPGSLELLVRM 261
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G +L + G ++ F P +S ILPG + + W++ + F++Y+ + Y
Sbjct: 262 GGPALMLLFVLSGCSLLYRFGPNRRSPSWRCILPGSVAATLLWLLTSFGFSYYVSHIAGY 321
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L + + +++ Y+ +LGAELNA + I
Sbjct: 322 GATYGPLGAFVATMMWFYVSAYVVLLGAELNAGLEIQ 358
>gi|218528864|ref|YP_002419680.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|218521167|gb|ACK81752.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 388
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 125/275 (45%), Gaps = 9/275 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI F ++ ++A+ ++ LLS+FP I G + + + + G
Sbjct: 95 WDIATRVYLEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLHG 154
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
PE + I +++ ++ + L F S + + ++ ++A+ +LN Y E
Sbjct: 155 VLPESAIEIIGEQVKRIATKGSGALGFTFFTSLTLSLWSANAAMKAMFDALNVVYEEEEK 214
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+++ + S + A + +++ V +P+ ++ LG+ +I GR
Sbjct: 215 RNFFWLNVRSLTFTAGALLFIILALISIVVLPVVFNFL-----GLGDGARLIAMGRWPVL 269
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L L GL ++ + P+ +++ + G + + W++ ++LF+ Y+ F Y+ Y
Sbjct: 270 LLVLLGGLAVLYRYGPSRERARWRWVGAGSVVAGVLWLIASILFSWYVANFGNYNETYGS 329
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ + ++++ +LG E+NA + R
Sbjct: 330 LGAVIGFMTWIWISATIVLLGGEINAEIEHQTARD 364
>gi|229074335|ref|ZP_04207373.1| YihY [Bacillus cereus Rock4-18]
gi|229095110|ref|ZP_04226105.1| YihY [Bacillus cereus Rock3-29]
gi|229101212|ref|ZP_04231976.1| YihY [Bacillus cereus Rock3-28]
gi|229114064|ref|ZP_04243489.1| YihY [Bacillus cereus Rock1-3]
gi|228669334|gb|EEL24751.1| YihY [Bacillus cereus Rock1-3]
gi|228682180|gb|EEL36293.1| YihY [Bacillus cereus Rock3-28]
gi|228688295|gb|EEL42178.1| YihY [Bacillus cereus Rock3-29]
gi|228708777|gb|EEL60912.1| YihY [Bacillus cereus Rock4-18]
Length = 288
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMYLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G IF + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGAIFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|197116537|ref|YP_002136964.1| ribonuclease BN family protein [Geobacter bemidjiensis Bem]
gi|197085897|gb|ACH37168.1| ribonuclease BN family protein [Geobacter bemidjiensis Bem]
Length = 316
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 128/277 (46%), Gaps = 4/277 (1%)
Query: 1 MREYFCI----VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH 56
+R YF + ++ A + F EED A+ ++ L + FPF++F L +L
Sbjct: 4 LRRYFKLGDTSYKELAKRAFKKFSEEDCPEHAAAMAYYFLFASFPFLLFLTTLIAYLPIP 63
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ V+D P I D I + +GL ++ + A + SSN + ++ ++
Sbjct: 64 HLLDYVLDNASRVLPGETFTLIEDNIQALFTNKKQGLLSMGIVLALWASSNAIVSVMDAM 123
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N Y V E R ++ RLI+ G V+ SV ++ + YV G +
Sbjct: 124 NNLYDVKEGRPFWKVRLIAIGLVIGLSVLFLVAMAALMFGNQIGDYVAGLINFGGAFKVA 183
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + T+ L + + ++ F P + + + I PG + SW++ ++ F++YI F
Sbjct: 184 WFAALVPVTLFVLVLAVAVIYYFTPDVEHQWVWISPGAVIAIPSWILMSLAFSYYINNFG 243
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y Y + +++ L++LY+ G+ + GA +N+ +
Sbjct: 244 SYDKTYGSIGAVIVLLLWLYLTGLIILAGAVVNSVIE 280
>gi|229009893|ref|ZP_04167112.1| YihY [Bacillus mycoides DSM 2048]
gi|228751324|gb|EEM01131.1| YihY [Bacillus mycoides DSM 2048]
Length = 289
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++
Sbjct: 14 FSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLLEV 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPDDAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L F++ F P K K ++ G +F I W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LIALFSFLYTFAPDRKLKRREVVSGALFATIGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|30018660|ref|NP_830291.1| ribonuclease BN [Bacillus cereus ATCC 14579]
gi|75762510|ref|ZP_00742370.1| Ribonuclease BN [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|206967706|ref|ZP_03228662.1| YihY family protein [Bacillus cereus AH1134]
gi|218234197|ref|YP_002365252.1| YihY family protein [Bacillus cereus B4264]
gi|218895526|ref|YP_002443937.1| YihY family protein [Bacillus cereus G9842]
gi|228899127|ref|ZP_04063399.1| YihY [Bacillus thuringiensis IBL 4222]
gi|228937697|ref|ZP_04100333.1| YihY [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228950960|ref|ZP_04113081.1| YihY [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228970585|ref|ZP_04131235.1| YihY [Bacillus thuringiensis serovar thuringiensis str. T01001]
gi|228977155|ref|ZP_04137556.1| YihY [Bacillus thuringiensis Bt407]
gi|229042309|ref|ZP_04190060.1| YihY [Bacillus cereus AH676]
gi|229068157|ref|ZP_04201464.1| YihY [Bacillus cereus F65185]
gi|229077762|ref|ZP_04210390.1| YihY [Bacillus cereus Rock4-2]
gi|229108075|ref|ZP_04237700.1| YihY [Bacillus cereus Rock1-15]
gi|229125902|ref|ZP_04254927.1| YihY [Bacillus cereus BDRD-Cer4]
gi|229143195|ref|ZP_04271627.1| YihY [Bacillus cereus BDRD-ST24]
gi|229148807|ref|ZP_04277055.1| YihY [Bacillus cereus m1550]
gi|229176994|ref|ZP_04304389.1| YihY [Bacillus cereus 172560W]
gi|229188674|ref|ZP_04315713.1| YihY [Bacillus cereus ATCC 10876]
gi|296501234|ref|YP_003662934.1| ribonuclease BN [Bacillus thuringiensis BMB171]
gi|29894201|gb|AAP07492.1| Ribonuclease BN [Bacillus cereus ATCC 14579]
gi|74490006|gb|EAO53362.1| Ribonuclease BN [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|206736626|gb|EDZ53773.1| YihY family protein [Bacillus cereus AH1134]
gi|218162154|gb|ACK62146.1| YihY family protein [Bacillus cereus B4264]
gi|218544049|gb|ACK96443.1| YihY family protein [Bacillus cereus G9842]
gi|228594863|gb|EEK52643.1| YihY [Bacillus cereus ATCC 10876]
gi|228606469|gb|EEK63895.1| YihY [Bacillus cereus 172560W]
gi|228634601|gb|EEK91182.1| YihY [Bacillus cereus m1550]
gi|228640276|gb|EEK96674.1| YihY [Bacillus cereus BDRD-ST24]
gi|228657560|gb|EEL13373.1| YihY [Bacillus cereus BDRD-Cer4]
gi|228675350|gb|EEL30569.1| YihY [Bacillus cereus Rock1-15]
gi|228705553|gb|EEL57911.1| YihY [Bacillus cereus Rock4-2]
gi|228714971|gb|EEL66839.1| YihY [Bacillus cereus F65185]
gi|228727029|gb|EEL78235.1| YihY [Bacillus cereus AH676]
gi|228782603|gb|EEM30780.1| YihY [Bacillus thuringiensis Bt407]
gi|228789172|gb|EEM37101.1| YihY [Bacillus thuringiensis serovar thuringiensis str. T01001]
gi|228808687|gb|EEM55185.1| YihY [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228821984|gb|EEM67976.1| YihY [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228860568|gb|EEN04956.1| YihY [Bacillus thuringiensis IBL 4222]
gi|296322286|gb|ADH05214.1| ribonuclease BN [Bacillus thuringiensis BMB171]
gi|326938192|gb|AEA14088.1| ribonuclease BN [Bacillus thuringiensis serovar chinensis CT-43]
Length = 288
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLLEV 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPDDAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 ITTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKALGLSDSFSFVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|188581649|ref|YP_001925094.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179345147|gb|ACB80559.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 396
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 119/268 (44%), Gaps = 9/268 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ E +++ ++ LL++FP + ++ G + + I+ + G
Sbjct: 104 DILKRTYRDIGENRLTLVSAGVTFFVLLAIFPAVAALVSVYGLVADVATINQQIESLRGI 163
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ ++ L + + ++ GV+ + +LN Y E R
Sbjct: 164 LPSGGVDILAEQVKRLTEKGDTTLGLTALFGIALSVWSANGGVKHVFDALNLVYNEREQR 223
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L+S + A + +VI VA+P+A+ ++ L + + R A
Sbjct: 224 GFFKLNLVSLAFTAGALLFIVIALAGIVAVPVAIQFL-----GLSSDAWWLALLRWPALF 278
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ + P+ + + + PG +F W+ G++LF+ Y+ F +Y Y L
Sbjct: 279 VVVILMLAVLYRYGPSRDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSL 338
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + ++++ +LGA+LNA +
Sbjct: 339 GAAIGFMTWIWLSTTIVLLGAQLNAELE 366
>gi|163850307|ref|YP_001638350.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|240137378|ref|YP_002961849.1| Ribonuclease BN [Methylobacterium extorquens AM1]
gi|163661912|gb|ABY29279.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|240007346|gb|ACS38572.1| Ribonuclease BN [Methylobacterium extorquens AM1]
Length = 388
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 124/275 (45%), Gaps = 9/275 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI F ++ ++A+ ++ LLS+FP I G + + + + G
Sbjct: 95 WDIATRVYLEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLHG 154
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
PE + I +++ ++ + L F S + + ++ ++A+ +LN Y E
Sbjct: 155 VLPESAIEIIGEQVKRIATKGSGALGFTFFTSLTLSLWSANAAMKAMFDALNVVYEEEEK 214
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+++ + S + A + +++ V +P+ ++ LG+ +I R
Sbjct: 215 RNFFWLNVRSLTFTAGALLFIILALISIVVLPVVFNFL-----GLGDGARLIAMARWPVL 269
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L L GL ++ + P+ +++ + G + + W++ ++LF+ Y+ F Y+ Y
Sbjct: 270 LLVLLGGLAVLYRYGPSRERARWRWVGAGSVVAGVLWLIASILFSWYVANFGNYNETYGS 329
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ + ++++ +LG E+NA + R
Sbjct: 330 LGAVIGFMTWIWISATIVLLGGEINAEIEHQTARD 364
>gi|254502756|ref|ZP_05114907.1| YihY family protein [Labrenzia alexandrii DFL-11]
gi|222438827|gb|EEE45506.1| YihY family protein [Labrenzia alexandrii DFL-11]
Length = 294
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 118/266 (44%), Positives = 162/266 (60%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ DAI HF +DG+AMASH++LS LL++FP ++F A+LAGF G TV ++VF AW
Sbjct: 16 VLKDAIGHFSRDDGFAMASHVALSGLLAIFPLLIFIASLAGFFGMVGAADTVSELVFDAW 75
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ +A P+ EI VL VP L T A+AA +F+SNGVEALR +LNRAYR +E RS+ +
Sbjct: 76 PKTVAAPVVREIENVLTVPRSDLLTFGAVAALWFASNGVEALRTALNRAYRQIEKRSFIL 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R+ S V+L +V L+ +F+ V PL + +R F P + LL I R L
Sbjct: 136 LRIQSLALVILGAVILLAYTFLVVLAPLGIEALRGFVPQVEPFLLSINIARYTLAGSLLI 195
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+GL H LP+ K I PGVI T + W+V F Y+ F+ Y + Y GLA IMT
Sbjct: 196 VGLFMTHWLLPSGKRSFSDIWPGVIATLLLWIVSGSAFGAYLARFANYVSTYGGLAGIMT 255
Query: 251 CLVFLYMLGVFFILGAELNASMIIYY 276
L+FLY+ + FILG ELNA++
Sbjct: 256 ALIFLYICSLAFILGGELNAAIARQR 281
>gi|325676097|ref|ZP_08155779.1| tRNA processing ribonuclease BN [Rhodococcus equi ATCC 33707]
gi|325553137|gb|EGD22817.1| tRNA processing ribonuclease BN [Rhodococcus equi ATCC 33707]
Length = 362
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
++ F + +A+ ++ A+L++FP ++ +L G G Q V V+++V
Sbjct: 37 VLRKTAREFGTDQCTDLAAALTYYAVLALFPALLVIVSLLGVFGQGQRTVDAVMEMVGQL 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + Q++A P+ G+ I L A + +S V A ++NR Y + E R
Sbjct: 97 GPTNAVDTLREPVEQLVAAPSAGIALVIGVLGALWSASGYVGAFARAMNRIYEIEEGRPI 156
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ R + F V + + V V LG+ + W+ + +L
Sbjct: 157 WKLRPLMFVVTAFCLVAVGASGLMLVISGPVARSVGDVL-GLGDAAVTAWDIAKWPVLLL 215
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + ++ P K I PG + W+ + LF Y+ F++Y+ Y LA
Sbjct: 216 VVGVLVAVLYYVTPNVSQPKFRWISPGAAIAIVVWIGASALFAVYVSNFASYNKTYGSLA 275
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
+ L++L++ + + GAE +A +
Sbjct: 276 GAVVFLLWLWITNLALLFGAEFDAELER 303
>gi|312137801|ref|YP_004005137.1| ribonuclease bn [Rhodococcus equi 103S]
gi|311887140|emb|CBH46449.1| ribonuclease BN [Rhodococcus equi 103S]
Length = 362
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
++ F + +A+ ++ A+L++FP ++ +L G G Q V V+++V
Sbjct: 37 VLRKTAREFGTDQCTDLAAALTYYAVLALFPALLVIVSLLGVFGQGQRTVDAVMEMVGQL 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + Q++A P+ G+ I L A + +S V A ++NR Y + E R
Sbjct: 97 GPTNAVDTLREPVEQLVAAPSAGIALVIGVLGALWSASGYVGAFARAMNRIYEIEEGRPI 156
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ R + F V + + V V LG+ + W+ + +L
Sbjct: 157 WKLRPLMFVVTAFCLVAVGASGLMLVISGPVARSVGDVL-GLGDAAVTAWDIAKWPVLLL 215
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + ++ P K I PG + W+ + LF Y+ F++Y+ Y LA
Sbjct: 216 VVGVLVAVLYYVTPNVSQPKFRWISPGAAIAIVVWIGASALFAVYVSNFASYNKTYGSLA 275
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
+ L++L++ + + GAE +A +
Sbjct: 276 GAVVFLLWLWITNLALLFGAEFDAELER 303
>gi|229159554|ref|ZP_04287568.1| YihY [Bacillus cereus R309803]
gi|228623856|gb|EEK80668.1| YihY [Bacillus cereus R309803]
Length = 287
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMYLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|118593797|ref|ZP_01551163.1| Ribonuclease BN [Stappia aggregata IAM 12614]
gi|118433592|gb|EAV40257.1| Ribonuclease BN [Stappia aggregata IAM 12614]
Length = 296
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 119/282 (42%), Positives = 166/282 (58%), Gaps = 2/282 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ +++ ++ DAI HF +DG+AMASH++LS LL++FP ++F A+LA FLG T
Sbjct: 4 RQTVLVIYAVLKDAIGHFARDDGFAMASHVALSGLLAIFPLLIFIASLAAFLGMTGAADT 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V +++F AWP +A P+ EI VL + L T A+AA +FSSNGVEALR +LNRAYR
Sbjct: 64 VSELLFDAWPRSVASPVVREIQNVLTIRRGDLVTFGAVAALWFSSNGVEALRTALNRAYR 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS + RL S G VLL + L+ +F+ V PLA+ ++ F P + LL I R
Sbjct: 124 QHETRSIVLLRLQSIGLVLLGASILLAYTFLVVLAPLAIEGLKVFVPQVETFLLSINVAR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L IGL H LPA + PGV T W++ F Y+ +F+ Y +
Sbjct: 184 YTLAGSLLIIGLFITHWLLPAGHRTFRDLWPGVFATLFMWIIAGSAFGAYLASFANYVST 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM--IIYYWRKKP 281
Y GLA IMT L+FLY+ + FILG ELNA++ YW ++
Sbjct: 244 YGGLAGIMTALIFLYICALVFILGGELNAAISRQRRYWHRRK 285
>gi|284991775|ref|YP_003410329.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284065020|gb|ADB75958.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 374
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 10/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ A ++ + ++ L++FP ++ N+ G + + + V ++ +
Sbjct: 71 QIVQRAWAENNADNMPIIGGGVAFFGFLAIFPALIAMMNIYGLVASPETVARQVEDLSAQ 130
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE A I D++ ++ L S L A + +S GV L ++N AY VE R
Sbjct: 131 LPESAADLIGDQLNAIVTNSGGALSFGLAASVLGALWSASGGVGNLVTAVNLAYDEVETR 190
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + IS G L A V ++I + +P L + LG ++ + +
Sbjct: 191 GFVKRKAISLGLTLGAIVFVLITFTLVAVVPNVLDAL-----PLGPFATVLAQVVRWVVL 245
Query: 187 LALFIG-LIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L +F G L ++ P + + + G I + W V ++ F+ Y+ F +Y Y
Sbjct: 246 LGIFAGSLAVLYRVAPDRDAPQLRWVSLGAIVVTVIWAVVSLGFSIYVDNFGSYDKTYGA 305
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
+A ++ +++LY+ +LGAE+N+
Sbjct: 306 IAGVIVLMLWLYLTCYLILLGAEINSE 332
>gi|282866832|ref|ZP_06275868.1| ribonuclease BN [Streptomyces sp. ACTE]
gi|282558324|gb|EFB63890.1| ribonuclease BN [Streptomyces sp. ACTE]
Length = 360
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 108/271 (39%), Gaps = 4/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ + F +++ A+ ++ +LS+FP ++ +L G + V+D +
Sbjct: 60 WAVLRRTVREFADDELADRAAALTYYGVLSLFPALLVLVSLLG-IAGESATQQVMDNLRK 118
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + ++D + Q+ G + + A + +S + A S N Y + E R
Sbjct: 119 LAPGPVRDILSDAVEQLQGNGGTGSLMAVLGLVLALWSASGYIAAFIRSSNAVYDIPEGR 178
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + V V+ + + V L + +
Sbjct: 179 PVWKVLPLRLALTVTLMVLAVVSALIVVFTGPLAQRAGSALGVGDTALTAWSIAKWPVLV 238
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + + ++ P A+ + + PG + W++ + F Y+ FS+Y+ Y L
Sbjct: 239 LLVTVMIALLYWAAPNARGRGFKWVTPGSFLALLLWMIASAGFALYVAYFSSYNKTYGAL 298
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A ++ LV+L++ + +LG E +A M
Sbjct: 299 AGVIVFLVWLWITNLAILLGLEFDAEMARQR 329
>gi|116668913|ref|YP_829846.1| putative ribonuclease BN [Arthrobacter sp. FB24]
gi|116609022|gb|ABK01746.1| putative ribonuclease BN [Arthrobacter sp. FB24]
Length = 377
Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 119/268 (44%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
I F ++ +A+ ++ ++LS+FP ++ +L G G Q ++D+V G
Sbjct: 53 IAKKTFREFTKDQCPDLAAALTYYSVLSIFPALLALVSLLGIFGDAQKTTSGLLDIVQGI 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I + + + PA G I L A + +S V A ++NR Y V E R +
Sbjct: 113 APGDTVNTIRPVVEDLSSSPAAGFTLVIGLLTALWSASGYVGAFGRAMNRVYEVDEGRPF 172
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R G ++ + +V+++ + V V LG+ L +WN + ML
Sbjct: 173 LKLRGTMLGVTVVNLLIVVVLAAMLVLSGPVAESVGNVI-GLGDAFLAVWNIAKWPVMLV 231
Query: 189 LFIG-LIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L I + + P K K + G + +++ ++ F Y+ F++Y+ Y +
Sbjct: 232 LVIAAIAVLFYATPNVKQPKFRWMSMGSAIALVVFLLASLAFGFYVANFNSYNKTYGAIG 291
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L++L + + GAE +A M
Sbjct: 292 GVIIALLWLWILNMSLLFGAEFDAEMER 319
>gi|89097736|ref|ZP_01170624.1| hypothetical protein B14911_15112 [Bacillus sp. NRRL B-14911]
gi|89087595|gb|EAR66708.1| hypothetical protein B14911_15112 [Bacillus sp. NRRL B-14911]
Length = 286
Score = 218 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 117/259 (45%), Gaps = 2/259 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + ++ +A+ + +LS+FP ++ ++ +L I + P
Sbjct: 8 LKKLGKEIKDDRATGLAAEQAYYYMLSIFPILILLLSIVPYLNIDP--QKAISFLQTVMP 65
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + ++ ++ P+ GL T + + +SNG++A ++N+A+ V E RS+
Sbjct: 66 SETAAVFEENVVNIVTQPSGGLLTFGIIGTLWSASNGMQAFIRAMNQAFDVEETRSFIKA 125
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RLIS G L +L++ + V + L V+ F + ++ R ++ +
Sbjct: 126 RLISIGLTLGLIFSLIVALVLPVFGNVILDLVQSFINIPDEMQILFSVLRWVVAIIVIAA 185
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ P ++PG + + W + ++ + YI F+ YS Y L ++
Sbjct: 186 VLSVLYKLAPNKHYPFKHVIPGAVAATVIWQLISLGLSIYIGNFANYSGTYGSLGGVIVL 245
Query: 252 LVFLYMLGVFFILGAELNA 270
+++ Y+ G+ ++G E+NA
Sbjct: 246 MLWFYLTGLTLVVGGEINA 264
>gi|29827533|ref|NP_822167.1| ribonuclease BN family membrane protein [Streptomyces avermitilis
MA-4680]
gi|29604633|dbj|BAC68702.1| putative membrane protein, ribonuclease BN-like family
[Streptomyces avermitilis MA-4680]
Length = 393
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ +L++FP ++ +L G G V+ V
Sbjct: 93 VLKGSLREFKDDELTDRAAALTYYGVLALFPALLVLVSLLGITG-KSTTDKVLTNVQKLA 151
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P IT + Q+ G + I + A + +S V A + N Y + E R
Sbjct: 152 PGSARDIITRAVEQLQNNAGTGSVVAIIGLVLAVWSASGYVAAFIRASNAVYDIPEGRPV 211
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ I G ++ V VI + + V +G+ L +W+ + ++
Sbjct: 212 WKILPIRVGVTVVLMVLAVISALIVVFTGGLARQAGDAL-GIGDTALTVWSIAKWPVLVI 270
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + ++ P AK K I PG + W++ + F Y+ F++Y+ Y +A
Sbjct: 271 LVTLMIAILYWASPNAKVKGWRWITPGSFLALVIWMIASAGFAFYVANFASYNKTYGTMA 330
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A
Sbjct: 331 GVIVFLVWLWITNLAILLGLEFDAETARQR 360
>gi|254381761|ref|ZP_04997125.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340670|gb|EDX21636.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 379
Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 111/270 (41%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ +L++FP ++ +L G L V+D V
Sbjct: 49 VLRGTLKEFKDDELADRAAALTYYGVLALFPALLVLVSLIG-LAGESATKEVLDNVQKLA 107
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +TD + Q+ G L + + A + +S + A + N Y + E R
Sbjct: 108 PGSARDVVTDAVQQIQGHSGVGSLLAIVGLVVAVWSASGYIAAFIRASNAVYDMPEGRPV 167
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + + V + + V V +G+ L +W+ + ++
Sbjct: 168 WKVLSLRMALTVTLMVLACASALIVVFSGNLARQVGSSL-GIGDTALTVWSIVKWPVLVI 226
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ I + ++ P AK + + PG W+ + F Y+ F +Y+ Y LA
Sbjct: 227 LVTIMIALLYWAAPNAKGRGFKWVSPGSFLALAIWMAASAGFAFYVANFGSYNKTYGTLA 286
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A ++
Sbjct: 287 GVIVFLVWLWITNLAILLGLEFDAELVRQR 316
>gi|302548984|ref|ZP_07301326.1| ribonuclease BN family membrane protein [Streptomyces
viridochromogenes DSM 40736]
gi|302466602|gb|EFL29695.1| ribonuclease BN family membrane protein [Streptomyces
viridochromogenes DSM 40736]
Length = 389
Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 114/270 (42%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ +L++FP ++ ++ G G V++ V
Sbjct: 89 VLKGSLREFKDDELTDRAAALTYYGVLAMFPALLVLVSILGLTG-RSTTDKVLENVQQFA 147
Query: 71 PEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P IT + Q+ G + + A + +S V A S N Y + E R
Sbjct: 148 PGSARDIITRAVEQLQGNAGVGSLMAVVGLVLAVWSASGYVAAFIRSANAVYDIPEGRPV 207
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + G ++ V V + + V +G+ L +W+ + ++
Sbjct: 208 WKLLPVRVGVTVVLMVLAVFSALIVVFTGGLARQAGSVL-GIGDTALTVWSIAKWPVLVV 266
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ I + ++ P AK K I PG + + W+V + F Y+ F++Y+ Y +A
Sbjct: 267 LVTIMIAILYWATPNAKVKGFRWITPGSVLALLIWLVASAGFAVYVANFASYNKTYGTMA 326
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 327 GVIVFLVWLWITNLAILLGLEFDAETVRQR 356
>gi|253698774|ref|YP_003019963.1| ribonuclease BN [Geobacter sp. M21]
gi|251773624|gb|ACT16205.1| ribonuclease BN [Geobacter sp. M21]
Length = 316
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 61/274 (22%), Positives = 122/274 (44%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ A + F EED A+ ++ L + FPF++F L +L + V++
Sbjct: 15 YKELGKRAYKKFSEEDCPEHAAAMAYYFLFASFPFLLFLTTLIAYLPVPHLLDYVLENAS 74
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I D I + +GL ++ + A + SSN + ++ ++N Y V E R
Sbjct: 75 RLLPGETFTLIKDNIQALFTNKKEGLLSMGIVLALWASSNAIVSVMDAMNNLYDVKEGRP 134
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ RLI+ G V+ SV ++ + YV ++ + + T+
Sbjct: 135 FWKVRLIAIGLVVGLSVLFLLAMAALMFGNQIGDYVAGLIHFGEAFKVVWFAALVPITLF 194
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ F P + + + I PG + SW+ ++ F+ YI F +Y Y + +
Sbjct: 195 VLILAVAVIYYFTPDVEHQWVWISPGAVIAIPSWIFMSLGFSAYINNFGSYDKTYGSIGA 254
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ L++LY+ G+ + GA +N+ + K
Sbjct: 255 VIVLLLWLYLTGLIILAGAVINSVIEHSSEEGKK 288
>gi|115372638|ref|ZP_01459945.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|310823830|ref|YP_003956188.1| ribonuclease bn family protein [Stigmatella aurantiaca DW4/3-1]
gi|115370359|gb|EAU69287.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|309396902|gb|ADO74361.1| Ribonuclease BN family protein [Stigmatella aurantiaca DW4/3-1]
Length = 349
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 1/262 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWP 71
I+ F E+ A+ +S L S+FP + F LA +L A V ++ + P
Sbjct: 16 RRFIKEFQEDTATDCAAQLSYYFLFSLFPLLFFLVTLAAYLPFAPGTVEAMLQRIAPLVP 75
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + + ++ P L T+ L A + +S GV+ALR +LN AY V E R + T
Sbjct: 76 GDALSLIDEHLRSLVNQPRPKLLTLGFLVALWSASRGVDALRKALNLAYDVPESRPVWKT 135
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ ++ L+ ++ L + VF+ + + + L R T + +
Sbjct: 136 QGVAMLMTLVGTLLLPLSFTVFLLGGRVGQWFAERLQLIDAFHLFWSWLRWPFTASLVML 195
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L + LP K + I PG + + W+V FT Y+ F Y+ Y + ++
Sbjct: 196 MLALCYYVLPDVKQRFKYITPGSVLGTVLWLVSTWGFTQYVDEFGNYNVTYGSIGGVVVL 255
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L +LY+ G+ FI+G E+NA +
Sbjct: 256 LTWLYISGLIFIVGGEVNAILE 277
>gi|77460571|ref|YP_350078.1| ribonuclease BN [Pseudomonas fluorescens Pf0-1]
gi|77384574|gb|ABA76087.1| putative ribonuclease [Pseudomonas fluorescens Pf0-1]
Length = 316
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 63/266 (23%), Positives = 124/266 (46%), Gaps = 1/266 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ I FV+++ AS ++ L S+FPFI+F L GFL F +
Sbjct: 11 LHRVMVRTITEFVDDEMSTYASALAYQMLFSLFPFILFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A Y +S GV + ++N AY VVE R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALYTASAGVRLMMSAMNAAYDVVEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L++ + + V P + ++ ++ + R ++
Sbjct: 130 LWKRFPLSVIYTVGIAGMLLVAAALMVLGPQVMGWIAAQVGLEEVIVTLWTIARWPVIVI 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ +P K + I PG + + W++ ++ F Y+ TF+ Y+ MY + +
Sbjct: 190 LMMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIIASLGFAFYVKTFANYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
I+ L++ Y+ +LGAE+NA +
Sbjct: 250 IIVLLLYFYISSAVLLLGAEMNAVIE 275
>gi|297196223|ref|ZP_06913621.1| ribonuclease BN family membrane protein [Streptomyces
pristinaespiralis ATCC 25486]
gi|197720035|gb|EDY63943.1| ribonuclease BN family membrane protein [Streptomyces
pristinaespiralis ATCC 25486]
Length = 390
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 120/280 (42%), Gaps = 9/280 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ F ++ ++ F +++ A+ ++ +L++FP ++ +L G +G
Sbjct: 85 LKKSFG---QVLRGTLKEFKDDELTDRAAALTYYGILALFPALLVLVSLLGIMG-QSTTQ 140
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNR 118
V++ + P IT+ + Q+ + G L I L A + +S V A S N
Sbjct: 141 KVLENIQQLAPGPARDVITNAVTQLQGSSSTGSILAIIGLLGALWSASGYVAAFIRSSNA 200
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y V E R + + G L + + + + + + +G+ + +W
Sbjct: 201 VYDVPEGRPAWKVLPVRLGVTLALMIMACVSALIVILSGGIAQQLGTAL-GVGDTAMTVW 259
Query: 179 N-GRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ ++ + + + ++ P AK + I PG + W+V + F Y+ F
Sbjct: 260 TYAKWPVLVVLVSVMVALLYWATPNAKVRGFKWITPGSFIAVLIWLVASAGFAFYVANFG 319
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y+ Y LA I+ LV+L++ + +LG E +A ++
Sbjct: 320 SYNKTYGTLAGIIIFLVWLWITNLAILLGLEFDAELVRER 359
>gi|23010564|ref|ZP_00051208.1| COG1295: Predicted membrane protein [Magnetospirillum
magnetotacticum MS-1]
Length = 310
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 107/278 (38%), Positives = 159/278 (57%), Gaps = 1/278 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
VFD+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG G+
Sbjct: 12 SRLRKVFDVAGLAAQRFVAHDGWAIASHIALSMLTSLFPFLILVAALAGLFGSKSLADEA 71
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 72 GTLIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGI 131
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
EMR W++TRL S GYV+ + ++ +F+ V PL + P L L L + GRI
Sbjct: 132 REMRPWWLTRLESIGYVVCGAFAMLAFAFLVVLGPLIWRQLVFVAPGLEPLGLTVAIGRI 191
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTM 241
T + + + L+ H F+ A + +S++PG+ T W + + F Y+ FS Y++
Sbjct: 192 VITAVLIAMVLVIAHKFVAAGRRPFLSVMPGIAVTLGLWFLAGLGFGFYLDRFSNAYAST 251
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y GLA+ M LVFLY L F+ G E+N ++I ++
Sbjct: 252 YGGLATAMIFLVFLYWLAAMFLFGGEVNGTVIAARRQR 289
>gi|170748550|ref|YP_001754810.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170655072|gb|ACB24127.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 375
Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 126/274 (45%), Gaps = 9/274 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI F ++ A+A+ ++ LLS+FP I + G + + +
Sbjct: 83 DIAVRVYLEFNKDRVLAVAAGVTFYTLLSLFPAIAALVSCYGLFADVTVINDHLAQLHAV 142
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I D++ ++ A + L F S L + + ++ ++A+ +LN Y E R
Sbjct: 143 LPSGAVELIGDQVKRIAAKGSGSLSITFFSSLLLSIWSANAAMKAMFDALNVVYEEEEKR 202
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+++ L S + + A + +++ V V +P+ L ++ LG+ ++ R A +
Sbjct: 203 NFFWLNLRSLTFTVGALLFIIVALNVIVVVPVVLNFL-----GLGSTAWLLAALRWPAIL 257
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L GL ++ F P+ ++ + G + + W+ ++LF+ Y+ F TY+ Y L
Sbjct: 258 IVLLGGLSVLYRFGPSREHARWRWVGVGSVVAGLLWLAASLLFSWYVANFGTYNETYGSL 317
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ + ++++ +LG E+NA + R
Sbjct: 318 GAVIGFMTWIWISSTIVLLGGEINAELEHQTARD 351
>gi|288962283|ref|YP_003452578.1| ribonuclease BN [Azospirillum sp. B510]
gi|288914549|dbj|BAI76034.1| ribonuclease BN [Azospirillum sp. B510]
Length = 353
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 121/274 (44%), Gaps = 7/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ + ++ +A+ +S ALL++FP + ++ G + + T + + G
Sbjct: 54 DILLRVWDEQSGDNVSMLAAGVSYYALLAIFPAVAALVSIFGLVADPAMIETQLSQLRGL 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P ++D+ +V P++GL L + +S G +L +LN AY E R
Sbjct: 114 LPPEALTIVSDQARKVATAPSQGLGFGLIFGLLLTLWSASRGTNSLVTALNIAYGEKETR 173
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + +S G + + +++ + +A+P A+A V G I R
Sbjct: 174 GFLMLAALSMGLTVAGLLFVIVAMALIIAVPAAIAIVGLQDTPAG---WIANLARWPILA 230
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+ + L + + P + + + G + W++G++ F+ Y+ F +Y+ Y +
Sbjct: 231 AAIMLALAVFYRYAPDRREPRWRWVTWGSAMATMVWLLGSLGFSVYVSNFGSYNETYGSV 290
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ L++ + +LGAELNA + R
Sbjct: 291 GAVVILLLWFNLTSYVVLLGAELNAEIEHQTARD 324
>gi|184200660|ref|YP_001854867.1| hypothetical protein KRH_10140 [Kocuria rhizophila DC2201]
gi|183580890|dbj|BAG29361.1| hypothetical membrane protein [Kocuria rhizophila DC2201]
Length = 400
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
+ A+ F ++ +A+ ++ A+LSVFP ++ +L G G ++D +
Sbjct: 78 VFKRALSEFTKDGCTDLAASLTYFAVLSVFPALLALVSLLGVFGQGEATTKAILDFLNQY 137
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + ++D I Q+ GL + + A + +S A +LNR Y V E R +
Sbjct: 138 APSALVELLSDPISQLTTQSGAGLALVVGIVGALWTASGYTGAFSRALNRIYEVSEGRPF 197
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + + L+ V +V V V + LA LG+ + +WN +I +L
Sbjct: 198 WKLKPVMLLVTLI-VVLIVAAVMVMVLLSGDLAQTLGDAVGLGSTAVTVWNWVKIPVVLL 256
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + + + P + K + PG + + +V + F Y+ F+ Y+ Y +
Sbjct: 257 LLVLLIAILFYATPNVQQPKFRWMSPGAAISLVFMIVAGLAFAFYVANFAKYNATYGVIG 316
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
S++ L+ L+++ + GAE++A +
Sbjct: 317 SVIILLLGLWIMNNALLFGAEVDAELER 344
>gi|307318689|ref|ZP_07598122.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|306895716|gb|EFN26469.1| ribonuclease BN [Sinorhizobium meliloti AK83]
Length = 328
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 126/276 (45%), Gaps = 10/276 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + + E+ +A+ ++ LLSVFP + ++ G + + ++
Sbjct: 34 LRDVFWRVVSQISEDRISLIAAGVTFYVLLSVFPALASLVSIYGLVSDPATIAEQATLLA 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + +TD++ + + L F L A + + NGV AL ++N AY E
Sbjct: 94 AVLPAQSLQMMTDQLETLSSQKTSSLSFGFIAGLLFALWSARNGVGALFEAMNIAYDETE 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS+ L+S G+ L + ++ +P LA++ L + R
Sbjct: 154 KRSFIRLTLLSIGFTLAGLILTAVLIAAIAVLPAVLAFLHLELEGL------LRFVRWPV 207
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + G+ ++ + P+ + +K+ + G + I W+ ++ F++YI F+ Y+ Y
Sbjct: 208 MLLLIAAGITLIYRYGPSREPAKLRWLTWGAALSTICWLGASLAFSYYIDNFANYNATYG 267
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ ++++++ + I+GAELNA + R
Sbjct: 268 ALGALIGFMLWIWISTMIVIIGAELNAELEHQTARD 303
>gi|327438684|dbj|BAK15049.1| predicted membrane protein [Solibacillus silvestris StLB046]
Length = 311
Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I D I D M + ++ LLS FP ++F L +L Q + D +
Sbjct: 33 FIQDLIYRTKNVDMSGMGAQLAYFFLLSFFPMLIFMVTLLPYLNLEQ--GQIFDFLSDVM 90
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + I + VL GL +I + + +S GV+AL SLNRAY V E R+ ++
Sbjct: 91 PEEVYGLIETTLTDVLNNQNGGLLSIGIIGTLWSASRGVDALMKSLNRAYDV-EGRAGFL 149
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S + + ++I V V + + + R +F
Sbjct: 150 NRLWSLVFTIALVAVILIALVFPVFGQQIGNIVFGYLGVEESFANVWTFVRWITPPTLIF 209
Query: 191 IGLIFVHLFLPA--AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I + ++ +P + + S++PG +F + W+V F+ YI F YS+ Y + +
Sbjct: 210 IVISVMYWIVPNTDPRLTMFSVIPGAVFATLGWLVLTYGFSFYINNFGNYSSTYGSIGGV 269
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++LY G+ ILG LNAS K+
Sbjct: 270 IILMLWLYFTGMIIILGGLLNASFQKRQLAKE 301
>gi|158426274|ref|YP_001527566.1| ribonuclease BN [Azorhizobium caulinodans ORS 571]
gi|158333163|dbj|BAF90648.1| ribonuclease BN [Azorhizobium caulinodans ORS 571]
Length = 324
Score = 215 bits (549), Expect = 5e-54, Method: Composition-based stats.
Identities = 108/278 (38%), Positives = 163/278 (58%), Gaps = 1/278 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ DA+ F+ +DGWA+ASHI+LS L+S+FPF++F LAGFL
Sbjct: 28 NMLRRTYRVVMDAVWTFLADDGWAIASHIALSILMSLFPFLIFLTALAGFLDLRPLANEA 87
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I ++ WP+ +A+PI EI V+ + T+ A YFSSNG+E+LRI LNRAY +
Sbjct: 88 IQLILETWPDAVAEPIAREIHNVVNQVRADVLTVGVALAIYFSSNGIESLRIGLNRAYGM 147
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R+WY R+ S +VL+ + ++ +SF+ + PL + PAL + ++ R
Sbjct: 148 KEHRAWYRLRVSSVLFVLVGAAGMLALSFLVILGPLIWQTMVNNVPALKPISGVVTFARF 207
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTM 241
+T L L I L+ HL+LPA + +++ +LPG+ T W+V A +F Y+ F S Y T
Sbjct: 208 ASTALILIIALLMAHLWLPAGRRRLLDVLPGIGVTLTLWLVAATVFGIYLGEFSSNYVTT 267
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M LVFLY+ FI G ELNA+++ +
Sbjct: 268 YAGLASVMIALVFLYLTATAFIFGGELNAAILRDRRAR 305
>gi|290961371|ref|YP_003492553.1| hypothetical protein SCAB_70211 [Streptomyces scabiei 87.22]
gi|260650897|emb|CBG74014.1| putative membrane protein, ribonuclease-like [Streptomyces scabiei
87.22]
Length = 365
Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 110/271 (40%), Gaps = 4/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ + F +++ A+ ++ +LS+FP I+ ++ G +G + ++D +
Sbjct: 47 WAVVRRTAKEFQDDELSDRAAALTYYGVLSLFPAILVLVSMLGVVG-QRATDRILDNIGD 105
Query: 69 AWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D ++Q+ G L + LAA + +S V A + N Y + E R
Sbjct: 106 LAPGPARDILRDAVVQLSDSGGTGGLLAIVGLLAAVWSASGYVAAFIRTSNAVYDLPEGR 165
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + G L+ V L + + V G + + + +
Sbjct: 166 PAWKVTPLRIGLTLVLMVMLAASALIVVFTGPLAERAGTTIGLGGAAIAVWNIAKWPVLL 225
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + + ++ P + + + PG I + W+ + F Y F +Y+ Y L
Sbjct: 226 VLVTLMIALLYWAAPNVRGRGFRWVSPGGIVATLIWLAASAGFAVYAANFGSYNKTYGTL 285
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A + L++L++ + +LG E +A +
Sbjct: 286 AGAVVFLIWLWLTNLAILLGLEFDAELSRER 316
>gi|153005865|ref|YP_001380190.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
gi|152029438|gb|ABS27206.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
Length = 359
Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 6/257 (2%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
E ++ +A+ ++ +LS+FPF++F LA + +++ + P + +
Sbjct: 12 EELSKDQVTDIAATVTYYGVLSLFPFVLFLVALASVVIEPSDAERMVEELGQVAPGAVTQ 71
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I D I Q+ A L A+AA + +S GV A+ +LN AY V E R ++ R I+
Sbjct: 72 IIGDRIRQLGAEQNVSLLGFGAVAALWAASGGVTAVMRALNTAYDVKEGRPFWKVRGIAI 131
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
LLA +I + V +A + G L I R+ L + + V
Sbjct: 132 LMTLLAGALGLIAALVAIAAAPLAEAIG------GPLGTAITWLRLPVAGLVMMLLWALV 185
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ LP + + I PG +F + WV+ + F+ Y+ +F +Y Y LA ++ L++++
Sbjct: 186 YYVLPDVEQRFRFITPGSVFGVLVWVLASWGFSRYVTSFGSYDKTYGSLAGVIVLLLWMW 245
Query: 257 MLGVFFILGAELNASMI 273
+ + ++GAE+NA +
Sbjct: 246 ITSLVLLVGAEVNAFIE 262
>gi|70726074|ref|YP_252988.1| hypothetical protein SH1073 [Staphylococcus haemolyticus JCSC1435]
gi|68446798|dbj|BAE04382.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 403
Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 124/267 (46%), Gaps = 3/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++FP ++F L Q + I +
Sbjct: 66 NFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLIFLLTLLPLFNLDQ---SQITGLLSN 122
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I V + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 123 APADTSSLIKGVISDVTKNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDNRNGI 182
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +++S + ++ V ++ + + ++ + I R+ ++ +
Sbjct: 183 LLKILSVIFTIVLGVVFLVAMALPTMGSVIAHFLFGPLGLDSQVKWIFSLIRVVLPLIII 242
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ P K+K+ S+LPG IFT + W++G+ F YI F YS Y +A I+
Sbjct: 243 LILFTILYSVAPNVKTKLKSVLPGAIFTSVIWLLGSFAFGFYISNFGNYSKTYGSIAGII 302
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L++LY+ I+GAE+NA + +
Sbjct: 303 ILLIWLYLTSFIIIIGAEINAIIHQRH 329
>gi|239832980|ref|ZP_04681309.1| YihY family protein [Ochrobactrum intermedium LMG 3301]
gi|239825247|gb|EEQ96815.1| YihY family protein [Ochrobactrum intermedium LMG 3301]
Length = 306
Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats.
Identities = 129/280 (46%), Positives = 184/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ + I +D I HF +DGWA ASHI+LS L+++FPF++F LA FLG +F
Sbjct: 21 MRKIRRFLRQITWDVIGHFSSDDGWAFASHIALSGLMALFPFLIFATTLASFLGTKEFAD 80
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E++ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 81 TAVHVIFDMWPSNIAAPIANEVMNVLTVQRSGLLTLSVIAAAYFASNGVEALRIALNRAY 140
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 141 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A+ F Y+ TF+ Y T
Sbjct: 201 RYTVAVAVLVLALFMVHIWLPAGRRSLGDILPGILVTLIAWLAAAMAFAKYLETFANYVT 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 261 TYAGLASIMVAIVFLYMLSAIFIIGAEINAAIMIFRKREQ 300
>gi|297204191|ref|ZP_06921588.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197714118|gb|EDY58152.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 359
Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 119/270 (44%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ LLS+FP I+ ++ G G TV+ +
Sbjct: 53 VLRGSLREFKDDELTDRAAALTYYGLLSLFPAILVLVSMLGLTG-KSATDTVLKNLKQFT 111
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P IT + Q+ G + + + A + +S V A S NR Y + E R
Sbjct: 112 PGSARDIITGAVEQLQGNAGVGSVMAIVGLVLAVWSASGYVAAFMRSANRVYDMPEGRPI 171
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + G ++ V V+ + + V LA+ +G+ L +W + ++
Sbjct: 172 WKILPVRVGLTVVLMVLAVVSALIVVFTGT-LAHKAGTALGIGDTALTVWAIAKWPVLVV 230
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ I + ++ P A+ K I PG + + W++ + F Y+ F++Y+ Y +A
Sbjct: 231 LVTIMIALLYWATPNARVKGFRWITPGSVLALLIWLIASAGFAFYVANFASYNKTYGTMA 290
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 291 GVIVFLVWLWISNLAILLGLEFDAETVRQR 320
>gi|15597947|ref|NP_251441.1| hypothetical protein PA2751 [Pseudomonas aeruginosa PAO1]
gi|107102287|ref|ZP_01366205.1| hypothetical protein PaerPA_01003345 [Pseudomonas aeruginosa PACS2]
gi|116050744|ref|YP_790435.1| hypothetical protein PA14_28530 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218891066|ref|YP_002439932.1| hypothetical protein PLES_23291 [Pseudomonas aeruginosa LESB58]
gi|254241206|ref|ZP_04934528.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296388780|ref|ZP_06878255.1| hypothetical protein PaerPAb_11543 [Pseudomonas aeruginosa PAb1]
gi|313107873|ref|ZP_07794045.1| putative membrane protein [Pseudomonas aeruginosa 39016]
gi|9948830|gb|AAG06139.1|AE004703_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115585965|gb|ABJ11980.1| putative membrane protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126194584|gb|EAZ58647.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218771291|emb|CAW27056.1| putative membrane protein [Pseudomonas aeruginosa LESB58]
gi|310880547|gb|EFQ39141.1| putative membrane protein [Pseudomonas aeruginosa 39016]
Length = 299
Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 126/274 (45%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F ++ + F+E+D AS ++ L S+FPF++ L G+L +F + +
Sbjct: 11 LFGLVKRTVNEFLEDDMPTYASALAYQMLFSLFPFLLVLITLVGYLHLPEFFAWLREQAA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I Q L GL +I A + SS G+ ++ I+LN AY V E R
Sbjct: 71 LLLPPEAMDQVNPVIDQ-LQQQKGGLLSIGIAVALWTSSAGIRSMMIALNAAYDVKESRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y L ++ L++ + + V P +A++ L+ + R +
Sbjct: 130 VWKRFSLSILYTLGIALLLLVAAGLMVTGPQVIAWIAGLVGLEQYLVTLWTWLRWPLAVF 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + + +P + + I PG + + I+W+ ++ + Y+ F+ Y+ MY + +
Sbjct: 190 LLMLAVALFYYLVPDVEQRFRFITPGSVLSVIAWIAASLAYGFYVKNFANYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
I+ L++ Y+ + GAELNA + + K
Sbjct: 250 IIILLLYFYLSAAVVLFGAELNAVIEHHSEDGKD 283
>gi|152983785|ref|YP_001347855.1| hypothetical protein PSPA7_2488 [Pseudomonas aeruginosa PA7]
gi|150958943|gb|ABR80968.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
Length = 299
Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 126/274 (45%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F ++ + F+E+D AS ++ L S+FPF++ L G+L +F + +
Sbjct: 11 LFGLVKRTVNEFLEDDMPTYASALAYQMLFSLFPFLLVLITLVGYLHLPEFFAWLREQAA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I Q L GL +I A + SS G+ ++ I+LN AY V E R
Sbjct: 71 LLLPPEAMDQVNPVIDQ-LQQQKGGLLSIGIAVALWTSSAGIRSMMIALNAAYDVKESRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y L ++ L++ + + V P +A++ L+ + R +
Sbjct: 130 VWKRFSLSILYTLGIALLLLVAAGLMVTGPQVIAWIASLVGLEQYLVTLWTWLRWPLAVF 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + + +P + + I PG + + I+W+ ++ + Y+ F+ Y+ MY + +
Sbjct: 190 LLMLAVALFYYLVPDVEQRFRFITPGSVLSVIAWIGASLAYGFYVKNFANYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
I+ L++ Y+ + GAELNA + + K
Sbjct: 250 IIILLLYFYLSAAVVLFGAELNAVIEHHSKDGKD 283
>gi|311067277|ref|YP_003972200.1| YfkH protein [Bacillus atrophaeus 1942]
gi|310867794|gb|ADP31269.1| YfkH [Bacillus atrophaeus 1942]
Length = 279
Score = 214 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 5/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D I + F +G + ++ ++ LLS+FPF++F LA +L V+ VV
Sbjct: 2 DFIKELFGRFTLHEGQSKSAELAYFFLLSLFPFMIFILTLAAYLPLTS--DDVLGVVDQY 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ I Q L GL + +AA + +SNG+ A+ + N AY V E RS+
Sbjct: 60 APDGAMSLIQSITEQTLNNRNGGLLSFGIIAALWSASNGMNAIVRAFNHAYEVEENRSFI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I RL S + T+++ + V +F A L + R + L L
Sbjct: 120 IVRLTSIFLTIGMVFTILVALLLPVFGKQIGLLTAEFVGASDMFLAVWAAVRWGISPLIL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++LF P K + + PG +F I W+ + LF+ Y+ T++ YS Y + I+
Sbjct: 180 LIVFSALYLFAPNKKLSLRFVFPGALFATIGWIAVSTLFSFYVGTYANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ Y+ G+ ILG E+NA + + RKK
Sbjct: 240 VLMIWFYLSGILIILGGEINALL---HKRKK 267
>gi|90418703|ref|ZP_01226614.1| possible membrane protein, ribonuclease [Aurantimonas manganoxydans
SI85-9A1]
gi|90336783|gb|EAS50488.1| possible membrane protein, ribonuclease [Aurantimonas manganoxydans
SI85-9A1]
Length = 396
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI F ++ +A+ + LL++FP +L GF+ + I +
Sbjct: 81 DICLRIYASFFDDRVMLIAAGATFYLLLALFPAFAVFVSLYGFVADPVSIGEHIAFIGQF 140
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + ++ ++++ + L F L A + ++NG++ L ++N AY E R
Sbjct: 141 LPTAGTELLESQLARLVSQDSSSLSLGFVSGLLFALWSANNGIKTLFEAMNVAYGEREQR 200
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S++ L++F + L A V + + V F ++I R
Sbjct: 201 SFFKLNLVAFCFTLGAIFI----GIVLIVTVGVVPVVMAVFGLQSFSEIMIAAMRWPVVF 256
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + ++ + P+ + + ++ G + + W++ ++ F+ Y+ F+ Y+ MY L
Sbjct: 257 GLIVVAIAMIYRYGPSRRRARWKWVVSGALLAAVVWLLASLGFSWYLQNFANYNAMYGSL 316
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+++ ++++++ + FI+GAE+NA M
Sbjct: 317 GAVIGFMMWVWISSLIFIIGAEINAEME 344
>gi|307303461|ref|ZP_07583215.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
gi|306902852|gb|EFN33444.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
Length = 328
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 127/276 (46%), Gaps = 10/276 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + + E+ +A+ ++ LLSVFP + ++ G + + ++
Sbjct: 34 LRDVFWRVVSQISEDRISLIAAGVTFYVLLSVFPALASLVSIYGLVSDPATIAEQATLLA 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + +TD++ + + L F L A + + NGV AL ++N AY E
Sbjct: 94 AVLPAQSLQMMTDQLETLSSQKTSSLSFGFIAGLLFALWSARNGVGALFEAMNIAYDETE 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS+ L+S G+ L + ++ +P LA++ L + R
Sbjct: 154 KRSFIRLTLLSIGFTLAGLILTAVLIAAIAVLPAVLAFLHLELEGL------LRFVRWPV 207
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + G+ ++ + P+ + +K+ + G + I W+V ++ F++YI F+ Y+ Y
Sbjct: 208 MLLLIAAGITLIYRYGPSREPAKLSWLTWGAALSTICWLVASLAFSYYIDNFANYNATYG 267
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ ++++++ + I+GAELNA + R
Sbjct: 268 ALGALIGFMLWIWISTMIVIIGAELNAELEHQTARD 303
>gi|92119332|ref|YP_579061.1| ribonuclease BN, putative [Nitrobacter hamburgensis X14]
gi|91802226|gb|ABE64601.1| ribonuclease BN, putative [Nitrobacter hamburgensis X14]
Length = 386
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 115/269 (42%), Gaps = 10/269 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ + E +A+A+ ++ +L ++FP + + G + D V G
Sbjct: 82 DILLRVYANVSEHRIFALAAGMTYYSLFAIFPALAAMVAVYGLFSDPATIAKHFDQVSGF 141
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +++ +V + + L F I + + ++ +++L +LN Y E R
Sbjct: 142 VPSGAIDVAREQLTRVASKGNQTLGLTFAIGLAVSLWSANAAMKSLFDTLNIVYGEKETR 201
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGRIYAT 185
+ +S + + V ++ V +P+ L YV L N L++ R A
Sbjct: 202 GFVKLNAMSLAFTMTGIVFVLAALGAVVVVPVILNYV-----GLSNFADLLVRTARWPAM 256
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + L ++ F P ++ + I G I W+ + LF+ Y F ++ Y
Sbjct: 257 FVGVALALALIYRFGPDREAPRWRWITWGSAVATILWLAASTLFSWYAANFGKFNETYGS 316
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
L + + + +L++ + +LGAEL+A M
Sbjct: 317 LGAAIGFMTWLWISAIVILLGAELDAQME 345
>gi|188579427|ref|YP_001922872.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179342925|gb|ACB78337.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 367
Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 121/274 (44%), Gaps = 9/274 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + F + +A+ ++ A+L++FP + ++ G + + T ++ + G
Sbjct: 75 DIALRLYQEFGNDRILLVAAGVTFYAILALFPAVAALVSIYGAVADPSTISTHLNELRGI 134
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + ++ +++ L +S L + + ++ G++A+ +LN AY E R
Sbjct: 135 LPDGAIDIVGGQVKRLVDKGDAALGLTALVSILLSLWSANGGMKAIFDALNIAYEEEEKR 194
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ + L S + A + +V+ V +P AL + L I R A +
Sbjct: 195 SFVMLNLQSLAFTAGALLFVVLALTGIVVVPAALQVL-----GLDQKAWYIALLRFPALL 249
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L ++ + P+ + K + G W+V + LF+ Y+ F +Y+ Y L
Sbjct: 250 ALVIGTLAVLYRYGPSRRKPKWRWVTWGSAVAGTLWLVASGLFSWYVANFGSYNETYGSL 309
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + ++++ +LGAELNA M R
Sbjct: 310 GAAIGFMTWIWISTTVVLLGAELNAEMEHQTARD 343
>gi|239825980|ref|YP_002948604.1| ribonuclease BN [Geobacillus sp. WCH70]
gi|239806273|gb|ACS23338.1| ribonuclease BN [Geobacillus sp. WCH70]
Length = 277
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 2/274 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I I + + F +++ +++ ++ LLS+FPF++F L +L ++ ++
Sbjct: 3 INLTFIREMVRRFQKDEIPRLSAELAYYFLLSLFPFLIFLFTLLAYLPIPH--EDILSII 60
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + I +V+ L + S +AA + +SNG+ A+ + NRAY V E R
Sbjct: 61 RQYAPKEALHLVEANIRRVMDDQNWKLLSFSIIAAIWSASNGMNAIVRAFNRAYDVEENR 120
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++I R +S + +++ F+ V ++ F L I R +
Sbjct: 121 PFFIARGMSVLLTIGMIFVIIVALFLPVFGKTIGLFLFSAFGFSETFLTIWNALRWVISS 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF+ ++ F P K + +I+ G IF + W++ ++ F++Y+ F+ Y+ MY L
Sbjct: 181 FILFVVFTALYYFAPNKKLRCANIVRGAIFATVGWIMTSLAFSYYVNNFANYTAMYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ +V+ Y+ G+ +LG E+NA +K
Sbjct: 241 GMIILMVWFYLSGMIIVLGGEMNAIFDCEREGRK 274
>gi|115374664|ref|ZP_01461942.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|310820812|ref|YP_003953170.1| ribonuclease bn [Stigmatella aurantiaca DW4/3-1]
gi|115368332|gb|EAU67289.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|309393884|gb|ADO71343.1| Ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
Length = 352
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 119/264 (45%), Gaps = 6/264 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + + +A ++ SA+L++FPF++F +LA + +I +
Sbjct: 12 EFFKSLKDEYTRDKVGDVAGALTFSAILAIFPFLLFLVSLASVIIDPAQAEQLIQELARV 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + + D + + A GL T+ + A + +S G+ AL +LN AY V E R ++
Sbjct: 72 APKEVVTILGDRLHALAASNNVGLLTLGGVGAVWAASGGMVALMTALNTAYGVEESRPFW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R ++ L+ + ++ + V P V FP L L R+ + +
Sbjct: 132 KVRGVALLVTLVTAAISILAAAAAVVTPALAEKVGGPFPTLVTWL------RLPVAGVMM 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ LP + + I PG + + W++ + F+ Y+ F +Y Y + ++
Sbjct: 186 MFVWALLYYALPDVQQRFRFITPGSVAGVLIWLLASWGFSQYVANFGSYDANYGAIGGVI 245
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L+++++ ++GAE+NA +
Sbjct: 246 VLLMWMWISSQVILVGAEINAILE 269
>gi|295400591|ref|ZP_06810569.1| ribonuclease BN [Geobacillus thermoglucosidasius C56-YS93]
gi|294977494|gb|EFG53094.1| ribonuclease BN [Geobacillus thermoglucosidasius C56-YS93]
Length = 275
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I + F E++ +++ ++ LLS+FPF++F L +L ++ V+
Sbjct: 7 FIREMARRFQEDEIPRLSAELAYYFLLSLFPFLIFLITLLAYLPIPH--EDLLSVIRQYA 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + +V+ L ++S + A + +SNG+ A+ + NRAY VVE R + +
Sbjct: 65 PKEAIHLVEANVHRVMDEQNGRLLSLSIIGAIWSASNGMNAIVRAFNRAYDVVENRPFLV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S L V +++ + V + ++ F L I R + L LF
Sbjct: 125 ARGMSVLLTLGMIVVIIVALVLPVFGKMIGLFLFSAFGFSATFLTIWNAMRWVISSLILF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ F P K + +++ G IF I W++ ++ F++Y+ F+ Y+ MY L ++
Sbjct: 185 AVFTALYYFAPNKKLRCANVVRGAIFATIGWIITSLAFSYYVNHFAHYAAMYGSLGGMII 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+V+ Y+ G+ +LG E+NA +K
Sbjct: 245 LMVWFYLSGMIIVLGGEMNAIFDCEREGRK 274
>gi|312112319|ref|YP_003990635.1| ribonuclease BN [Geobacillus sp. Y4.1MC1]
gi|311217420|gb|ADP76024.1| ribonuclease BN [Geobacillus sp. Y4.1MC1]
Length = 275
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I + F E++ +++ ++ LLS+FPF++F L +L ++ V+
Sbjct: 7 FIREMARRFQEDEIPRLSAELAYYFLLSLFPFLIFLITLLAYLPIPH--EDLLSVIRQYA 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + +V+ L ++S + A + +SNG+ A+ + NRAY VVE R + +
Sbjct: 65 PKEAIHLVEANVHRVMDEQNGRLLSLSIIGAIWSASNGMNAIVRAFNRAYDVVENRPFLV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S + V +++ + V + ++ F L I R + L LF
Sbjct: 125 ARGMSVLLTIGMIVVIIVALVLPVFGKMIGLFLFSAFGFSATFLTIWNAMRWVISSLILF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ F P K + +++ G IF I W++ ++ F++Y+ F+ Y+ MY L ++
Sbjct: 185 AVFTALYYFAPNKKLRCANVVRGAIFATIGWIITSLAFSYYVNHFAHYAAMYGSLGGMII 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+V+ Y+ G+ +LG E+NA +K
Sbjct: 245 LMVWFYLSGMIIVLGGEMNAIFDCEREGRK 274
>gi|284043536|ref|YP_003393876.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283947757|gb|ADB50501.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 328
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 106/274 (38%), Gaps = 4/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVV 66
+F + + + E++ A+ ++ LLS+FP ++ ++ G G Q ++ D+V
Sbjct: 29 LFATLKRTVREYSEDNMSDWAAALTYYGLLSLFPALIALVSILGLFGDPQSTTRSLTDIV 88
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P A I + + LF + AA + +S V A + N Y E
Sbjct: 89 TRLGPSSAADTFEGPIRSITSNRGAAGVLFFVGLGAAIWSASGYVGAFTRAANIVYETPE 148
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ R + L V L +++ V + V + + +
Sbjct: 149 GRPFWKLRPLQLLVTLAMVVMLALVALALVMTGPVVETVADSIGIGSTAVTVWEFAKWPV 208
Query: 185 TMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + ++ P K + PG + + W++ + LF Y+ F +Y Y
Sbjct: 209 MLAVVVLMFAVLYHVSPNVKLPGFRWVTPGALLAIVVWLIASALFAFYVANFGSYDKTYG 268
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L I+ LV+ ++ V +LG ELN+
Sbjct: 269 TLGGIVVLLVWFWITNVALLLGMELNSERERSRE 302
>gi|317124596|ref|YP_004098708.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
gi|315588684|gb|ADU47981.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
Length = 355
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 116/273 (42%), Gaps = 5/273 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVID 64
I + A F ++ +A+ ++ +LS+FP ++ +L G G V +++D
Sbjct: 31 KIWRTSLKRAAHEFGHDECTDLAAGLTYYGVLSIFPGLLALVSLLGVFGRGRSTVESLLD 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ A + I ++ A GL + + A + +S V A ++NR Y V
Sbjct: 91 ILEAVGQGDSADTLRGPITDMVNSGAAGLTLVVGLVGAVWSASGYVGAFGRAMNRIYGVD 150
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + R ++ + + ++ V V LG + W+ +
Sbjct: 151 EGRPFIRLRPLNLALTVAFVIMAALILLGLVLTGDLARAVGDTI-GLGGAAVTTWSIAKW 209
Query: 184 ATMLALFIGL-IFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L L I + ++ P K + + G + ++ +V +V F Y+ FS Y
Sbjct: 210 PVILILVIAMVALLYWATPNVKQPRFRWLSVGAVIAILAAIVASVGFGFYVSGFSNYDKT 269
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y LA ++ L++++++ + + GAE++A M
Sbjct: 270 YGSLAGVIVFLLWMWLMNLALLFGAEVDAEMER 302
>gi|153008339|ref|YP_001369554.1| putative ribonuclease BN [Ochrobactrum anthropi ATCC 49188]
gi|151560227|gb|ABS13725.1| putative ribonuclease BN [Ochrobactrum anthropi ATCC 49188]
Length = 288
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 131/280 (46%), Positives = 185/280 (66%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ + I YD I HF +DGWA ASHI+LS L+++FPF++F LA FLG +F
Sbjct: 1 MRKIRRFLRQITYDVIGHFSSDDGWAFASHIALSGLMALFPFLIFATTLASFLGTKEFAD 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E++ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVMNVLTVQRSGLLTLSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRLAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A+ F Y+ TF+TY T
Sbjct: 181 RYTVAVGVLVLALFMVHIWLPAGRRSLGDILPGILITLIAWLAAAMAFAKYLETFATYVT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIIGAEINAAIMIFRKREQ 280
>gi|27382587|ref|NP_774116.1| hypothetical protein blr7476 [Bradyrhizobium japonicum USDA 110]
gi|27355759|dbj|BAC52741.1| blr7476 [Bradyrhizobium japonicum USDA 110]
Length = 376
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 60/274 (21%), Positives = 119/274 (43%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + + ++ A A + LL++FP + + G + + +
Sbjct: 81 DIFWRTYQRIDDDRLLATAGGVVFFGLLAIFPAVTALVSSYGLFADPSTISANLQTLATM 140
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE + + D++ +V++ L F + L A + ++ GV+++ +LN AY E R
Sbjct: 141 LPEGSFQIVEDQVARVVSKGNTTLGVTFLLGLLLAIWSANAGVKSIFDALNVAYEEREKR 200
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ +S + V L++M VA PLAL LI+ R
Sbjct: 201 SFIRLNSVSLAFTAGGIVALLLMVGAVVAFPLALD----HLGLAPESKLIVALARWPLLF 256
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L + L ++ F P+ + + + G + + W+ G+ L + Y+ F+ Y+ Y L
Sbjct: 257 LILLVALAILYRFAPSRDAPRWQWLSLGAVAAALLWIAGSALLSWYLSEFANYNATYGSL 316
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + +++++M + + GAELN+ + R
Sbjct: 317 GAAIGLMMWMWMSAIVIMFGAELNSEIERQTLRD 350
>gi|289550401|ref|YP_003471305.1| Ribonuclease BN [Staphylococcus lugdunensis HKU09-01]
gi|289179933|gb|ADC87178.1| Ribonuclease BN [Staphylococcus lugdunensis HKU09-01]
Length = 409
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 61/276 (22%), Positives = 122/276 (44%), Gaps = 2/276 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + I I ++D +A+ ++ +L++FP ++F L V
Sbjct: 63 KYTKKPNFISYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDP--QQVK 120
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D+V P A ++ + + + ++ + + +SNG+ A+ S N AY V
Sbjct: 121 DMVSQNAPAETASVVSKIFNDITKNASGSILSVGLILTIWSASNGMTAIMNSFNVAYDVE 180
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R+ + +L+S + ++ + L + + ++ + I R+
Sbjct: 181 DGRNPIVLKLLSVVFTVVMGLVLAVALTLPTFGTFIKDHLFGAIGLDKQVAWIFDLIRVI 240
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + I ++ P K+KI S+ PG +FT I W++G+ F Y+ F YS Y
Sbjct: 241 LPFIIILLLFITLYSVAPNVKTKIKSVFPGALFTSIIWLLGSFGFGWYLSNFGNYSKTYG 300
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA I+ L++LY+ I+GAE+NA + + K
Sbjct: 301 SLAGIIILLLWLYITCFIIIIGAEINAIIHQRHVIK 336
>gi|315660133|ref|ZP_07912990.1| YihY family protein [Staphylococcus lugdunensis M23590]
gi|315494814|gb|EFU83152.1| YihY family protein [Staphylococcus lugdunensis M23590]
Length = 409
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 61/276 (22%), Positives = 122/276 (44%), Gaps = 2/276 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + I I ++D +A+ ++ +L++FP ++F L V
Sbjct: 63 KYTKKPNFISYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDP--QQVK 120
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D+V P A ++ + + + ++ + + +SNG+ A+ S N AY V
Sbjct: 121 DMVSQNAPAETASVVSKIFNDITKNASGSILSVGLILTIWSASNGMTAIMNSFNVAYDVE 180
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R+ + +L+S + ++ + L + + ++ + I R+
Sbjct: 181 DGRNPIVLKLLSVVFTVVMGLVLAVALTLPTFGTFIKDHLFGAIGLDKQVAWIFDLIRVI 240
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + I ++ P K+KI S+ PG +FT I W++G+ F Y+ F YS Y
Sbjct: 241 LPFIIILLLFITLYSVAPNVKTKIKSVFPGALFTSIIWLLGSFGFGWYLSNFGNYSKTYG 300
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA I+ L++LY+ I+GAE+NA + + K
Sbjct: 301 SLAGIIILLLWLYITCFIIIIGAEINAIIHQRHVIK 336
>gi|319948212|ref|ZP_08022371.1| TRNA processing ribonuclease BN [Dietzia cinnamea P4]
gi|319438147|gb|EFV93108.1| TRNA processing ribonuclease BN [Dietzia cinnamea P4]
Length = 357
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 5/270 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAW 70
I A+ F + +A+ ++ A+LS+FP ++ +L G G Q V V++++ GA
Sbjct: 38 IKRALSEFSRDKCTDLAASLTYFAVLSLFPALLAVVSLLGVFGQGQATVDAVMELLEGAA 97
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALA-AAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + I V+ PA G+ I+ LA A + +S V A ++NR Y + E R ++
Sbjct: 98 PEETLAALRGPIESVVNTPAAGIALITGLAGALWSASGYVGAFGRAMNRIYEIEEGRPFW 157
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+ ++ + + + + + V + LG + +W + +L
Sbjct: 158 KLKPVTVLLTAVLLLLVCLAGLILVVSGPIAEWAGNLI-GLGETAVTVWGIAKWPVLVLV 216
Query: 189 LFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + L ++ F P K K I G + I W V F Y+ FS+Y+ Y LA
Sbjct: 217 VVVILAVLYGFAPNVKQPKFRWISIGAVIALIVWAVATGGFVFYVTNFSSYNATYGSLAG 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L++L++ + GAE++A +
Sbjct: 277 VIIFLLWLWITNNALLFGAEVDAEVERARE 306
>gi|229543009|ref|ZP_04432069.1| ribonuclease BN [Bacillus coagulans 36D1]
gi|229327429|gb|EEN93104.1| ribonuclease BN [Bacillus coagulans 36D1]
Length = 280
Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 2/266 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I +E+ D MA+ +S LLS+FP ++F L +L V+++V P
Sbjct: 15 IAALVENSKRNDITGMAAQLSYFFLLSLFPLLIFLFTLLPYLPIKS--DDVLNMVRHFAP 72
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
K I + +VL GL + +A + +SNG+ A+ +LNRAY+V E R +
Sbjct: 73 SQSFKLIETTLKEVLTNRHGGLLSFGMIATLWSASNGMNAVIKALNRAYKVEESRPPVMQ 132
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RL+S L + + + + V + YV +F +L +I R T + LFI
Sbjct: 133 RLMSVMLTLGMIIVFIAVILIPVFGEQLIHYVFSYFGLPNDLKNMINILRWVLTPVLLFI 192
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ F P K ++++PG IF + W+V ++ + Y+ F Y+ Y L ++
Sbjct: 193 VFALLYFFAPNEKFGCLTVVPGAIFATVGWIVASLALSFYVSHFGNYNATYGSLGGMIIM 252
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
+++ Y+ G+ I G ELNA + +
Sbjct: 253 MLWFYISGIILIFGGELNAVLNDKHK 278
>gi|49086024|gb|AAT51322.1| PA2751 [synthetic construct]
Length = 300
Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F ++ + F+E D AS ++ L S+FPF++ L G+L +F + +
Sbjct: 11 LFGLVKRTVNEFLEGDMPTYASALAYQMLFSLFPFLLVLITLVGYLHLPEFFAWLREQAA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I Q L GL I A + SS G+ ++ I+LN AY V E R
Sbjct: 71 LLLPPEAMDQVNPVIDQ-LQQQKGGLLPIGIAVALWTSSAGIRSMMIALNAAYDVKESRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y L ++ L++ + + V P +A++ L+ + R +
Sbjct: 130 VWKRFSLSILYTLGIALLLLVAAGLMVTGPQVIAWIAGLVGLEQYLVTLWTWLRWPLAVF 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + + +P + + I PG + + I+W+ ++ + Y+ F+ Y+ MY + +
Sbjct: 190 LLMLAVALFYYLVPDVEQRFRFITPGSVLSVIAWIAASLAYGFYVKNFANYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
I+ L++ Y+ + GAELNA + + K
Sbjct: 250 IIILLLYFYLSAAVVLFGAELNAVIEHHSEDGKD 283
>gi|88812854|ref|ZP_01128099.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
gi|88789924|gb|EAR21046.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
Length = 322
Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 110/267 (41%), Gaps = 8/267 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI+ + A+ ++ A+L++FP + ++ G + Q V I V G
Sbjct: 27 RDILLRTKSEISNDHLSMAAAGVAFYAMLALFPALAAIISIWGLVSDPQQVMQQIQSVSG 86
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ A I + +V + + S L A Y +S G++AL LN Y E
Sbjct: 87 MLPDQTAAIIKSQATKVASASGGAVSLAALGSVLLAVYSASKGMKALIEGLNMVYDEEEK 146
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + L++ + + ++ + AIP L + +IW R
Sbjct: 147 RGFIKLNLVALILTIGLVLVMIAALGMIAAIPALLGSLGL---GAVTKTAVIW-LRWPLL 202
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L ++ + P+ + + + G + + W+ G+ F+ Y F +Y+ Y
Sbjct: 203 FVVAIASLALIYRYAPSRTQPRWRWVSVGAVVATLLWIAGSFAFSFYTRNFGSYNETYGS 262
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
L +++ L +L++ +LGAELN+
Sbjct: 263 LGAVIILLTWLWLSAFVVLLGAELNSE 289
>gi|302539626|ref|ZP_07291968.1| ribonuclease BN [Streptomyces hygroscopicus ATCC 53653]
gi|302457244|gb|EFL20337.1| ribonuclease BN [Streptomyces himastatinicus ATCC 53653]
Length = 395
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 110/270 (40%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ ++ F +++ A+ ++ +LS+FP ++ +L G + V+ +
Sbjct: 95 VFKGSLREFKDDELTDRAAALTYYGVLSLFPALLVLVSLVG-IAGKSTTDEVLSNLKQLA 153
Query: 71 PEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P IT + Q+ G + A + +S V A + N Y + E R
Sbjct: 154 PGSARDLITRTVEQLQGNGGTGSIMAITGLVLAVWSASGYVAAFIRASNAVYEMPEGRPA 213
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + G ++ V V + + V +G+ L +W+ + ++
Sbjct: 214 WKILPVRVGVTVVLMVLTVASALIVVFTGGLARQTGAAL-GIGDTTLTVWSIAKWPVLVI 272
Query: 188 ALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ P AK K I PG + W++ + FT Y+ F++Y+ Y +A
Sbjct: 273 LITVMLALLYWAAPNAKVKKFRWITPGSFLALVIWMIVSAGFTFYVANFASYNKTYGTMA 332
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A
Sbjct: 333 GVIVFLVWLWISNLAILLGLEFDAETARQR 362
>gi|170745562|ref|YP_001767019.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170659163|gb|ACB28217.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 351
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 63/274 (22%), Positives = 128/274 (46%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+++ + F + A A ++ ALL+ FP + ++ + + ++ G
Sbjct: 57 DVLFRVVYSFPRDRVLATAGGVAFFALLATFPALATIVSVYSLFADPHAISQHVSLLAGV 116
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + ++D++++V L T +S L A + +++GV AL +LN YR E R
Sbjct: 117 LPSGVLDLLSDQLIRVAQQSTGALSTASLVSVLIAFWSANSGVSALFDALNVIYREREKR 176
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S +F + L + + + + V +P+AL + AL + LL + R +
Sbjct: 177 SLMRFYATTFLFTLSGILFALTATSLVVVLPIALNQLG--LGALTDALLRL--VRWPGLL 232
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + +GL + + P + +K + G +SWV +V F+ Y+ +F +Y+ +Y L
Sbjct: 233 ILVSLGLAVTYRYGPGRRDAKWRWVSWGGAAAAVSWVCASVSFSWYVASFDSYNRIYGSL 292
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + +++ V +LGA+LNA + R
Sbjct: 293 GAGIGFMTWIWFSVVIVLLGAKLNAEIERQTARD 326
>gi|115525638|ref|YP_782549.1| putative ribonuclease BN [Rhodopseudomonas palustris BisA53]
gi|115519585|gb|ABJ07569.1| putative ribonuclease BN [Rhodopseudomonas palustris BisA53]
Length = 370
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 125/275 (45%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DII+ E ++ A+A+ + LL++FP I + + Q + + + G
Sbjct: 75 RDIIWRTYEQINDDRLLAVAAGVVFYGLLALFPAITALVSSYALVADPQTIRDHLSFLAG 134
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + D+I +VLA L F S A + ++ G++A+ +LN Y E
Sbjct: 135 VLPAGTFSVVEDQIARVLAKGEVKLGAAFLFSFALALWSANGGMKAIIDALNVVYDEEEK 194
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + +S + L + ++ + VA P+ L+ V +G+LLL GR A
Sbjct: 195 RGFIKLNAVSLAFTLGGLLAVLAAIGLVVAAPILLSMVG--LGTIGDLLLRF--GRWPAL 250
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + GL ++ F P+ +S I G + + W+VG+ ++Y+ + Y Y
Sbjct: 251 AVMILAGLAVLYRFAPSRRSPQWKWISVGSVSATVIWLVGSAALSYYLANYGAYDATYGS 310
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L + + +++++M + +LGAELN+ + +
Sbjct: 311 LGAAIGLMIWMWMSTIVVLLGAELNSEIEHQTVKD 345
>gi|226950854|ref|YP_002805945.1| YihY family protein [Clostridium botulinum A2 str. Kyoto]
gi|226843946|gb|ACO86612.1| YihY family protein [Clostridium botulinum A2 str. Kyoto]
gi|322807727|emb|CBZ05302.1| ribonuclease BN [Clostridium botulinum H04402 065]
Length = 285
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 129/278 (46%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F I+ I F+E++ A++S ++ + ++SVFPF++F L G+L H
Sbjct: 3 KNLFKIIPKSIKKLANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--ED 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P + + I +++ L + S + + +S G A+ LNRAY
Sbjct: 61 LLLGLKEIMPSNTYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYD 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ ++++ L + LV+ F+ V + I R
Sbjct: 121 VKERRSFVKVQIMTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +
Sbjct: 181 YIIMIGVTIFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRL 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + +++ LV+LY+ + I G E+NA ++ +
Sbjct: 241 YGSIGAVIVFLVWLYLTSIIVITGGEINALLVSSREKD 278
>gi|187776658|ref|ZP_02993131.1| hypothetical protein CLOSPO_00173 [Clostridium sporogenes ATCC
15579]
gi|187775317|gb|EDU39119.1| hypothetical protein CLOSPO_00173 [Clostridium sporogenes ATCC
15579]
Length = 285
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F I+ I + F+E++ A++S ++ + ++SVFPF++F L G+L H
Sbjct: 3 KNLFKIIPKGIKELTNRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--ED 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P + + I +++ L + S + + +S G A+ LN+AY
Sbjct: 61 LLLGLKEIIPSNAYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNKAYD 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ ++++ L + LV+ F+ V + I R
Sbjct: 121 VKERRSFVKVQIMTIFCTLGMAFVLVMSIFLLVFGRTIGRTLVYKLGFSWEFNRIWNLIR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +
Sbjct: 181 YTIMIGVTIFILAALYYYTPSKRLRWRDVLPGSIFATIAWIIASMGFSFYVDNFNNYSRL 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + +++ LV+LY+ + I G E+NA ++ +
Sbjct: 241 YGSIGAVIVFLVWLYLTSIIVITGGEINALLVSSREKD 278
>gi|220923045|ref|YP_002498347.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
gi|219947652|gb|ACL58044.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
Length = 347
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 129/274 (47%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ ++ A A ++ ALL+VFP + +L G + + + ++ G
Sbjct: 53 DIVWRVFWSLPQDRVLATAGGVAFFALLAVFPGLATIVSLYGLVADPSVIYQHLSLLTGV 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + E+ ++ A L T +S L A + +++GV AL +LN Y+ E R
Sbjct: 113 LPSGVLDLLASELTRITKQGAGTLSTTSVLSLLIAFWSANSGVSALFDALNVIYKEREKR 172
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + L + V +I + + VA+P+ L + A L L+ R A +
Sbjct: 173 TLVRFYGTTLLFTLSSVVFALIATGMVVAMPIILNQIGLRSSADAALRLV----RWPALL 228
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + +GL ++ + P+ + +K + G + WV + LF+ Y+ +F +Y+ Y L
Sbjct: 229 VVVSLGLSAIYRYGPSRREAKWRWVTWGSSVAALLWVCASALFSWYVASFDSYNRTYGSL 288
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + ++++ V +LGAELNA M R
Sbjct: 289 GAGVGFMTWIWLSVVIVLLGAELNAEMERQTARD 322
>gi|13473007|ref|NP_104574.1| hypothetical protein mll3481 [Mesorhizobium loti MAFF303099]
gi|14023755|dbj|BAB50360.1| mll3481 [Mesorhizobium loti MAFF303099]
Length = 310
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 117/275 (42%), Positives = 167/275 (60%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + ++YDA+ HF +DGWAMASH+++++L+++FPF++F L FLGA F
Sbjct: 28 LLRNIVALRRVLYDALGHFNTDDGWAMASHLAITSLMALFPFLIFATTLGSFLGAQAFAD 87
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + +VF WP+ IAKPI E+L VL V L T L AAYF+SNG+EALR SLNRAY
Sbjct: 88 TAVHLVFDTWPDQIAKPIAHEVLNVLTVRRTDLLTYGVLLAAYFASNGIEALRTSLNRAY 147
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R R+ S +VL+A+ + +S + V PL F + I
Sbjct: 148 RVTETRGIIYRRVQSIFFVLIATAGFLAISVLLVFAPLLARLAEAHFEWIKPYTGTITLW 207
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + GL VH +LPA K + +S++PG++FT +W++G+ +F Y+ FS+Y T
Sbjct: 208 RYVIASAVIIGGLFAVHYWLPAGKRRFVSLVPGIVFTLAAWLIGSTMFATYLDHFSSYVT 267
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
YAGLASIM +VFLY++ FILG ELNA++ Y
Sbjct: 268 TYAGLASIMIAVVFLYIVSAIFILGGELNAAISRY 302
>gi|146339131|ref|YP_001204179.1| putative ribonuclease [Bradyrhizobium sp. ORS278]
gi|146191937|emb|CAL75942.1| conserved hypothetical protein; putative membrane protein; putative
ribonuclease [Bradyrhizobium sp. ORS278]
Length = 353
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 121/274 (44%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++Y E+ + A+A+ ++ LL++FP + + G + ++ + G
Sbjct: 60 DVLYRVYENVGDHRIVALAAGMTFYTLLAIFPALAAMVAIYGLFSDPAKITGHLEQLQGL 119
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P D++ +V A ++ L F +S + + ++ +++L +LN YR E R
Sbjct: 120 MPGGAIDIARDQLTRVSAKGSQALGVTFLVSLAISLWSANAAMKSLFDTLNVVYREPERR 179
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ IS + A + ++ V +P+ L YV L++ GR A
Sbjct: 180 GFIKLNAISLLFTGGAILFALLAIAAIVVVPVILQYVG----LSDAADLLLRIGRWPAIF 235
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + +GL ++ + P + K I G W+ G+ LF+ Y F +++ Y L
Sbjct: 236 ICVSLGLALIYRYGPDREEPKWRWISWGSALAAALWLGGSALFSWYAANFGSFNATYGSL 295
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + ++++ + ++GAEL+A + R
Sbjct: 296 GAAVGFMTWIWISAIVILIGAELDAELEHQTLRD 329
>gi|168178914|ref|ZP_02613578.1| YihY family protein [Clostridium botulinum NCTC 2916]
gi|182670173|gb|EDT82149.1| YihY family protein [Clostridium botulinum NCTC 2916]
Length = 285
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 128/278 (46%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ I+ I F+E++ A++S ++ + ++SVFPF++F L G+L H
Sbjct: 3 KNLIKIMPKSIKKLANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--ED 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P + + I +++ L + S + + +S G A+ LNRAY
Sbjct: 61 LLLGLKEIMPSNTYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYD 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ ++++ L + LV+ F+ V + I R
Sbjct: 121 VKERRSFVKVQIMTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +
Sbjct: 181 YIIMIGVTIFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRL 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + +++ LV+LY+ + I G E+NA ++ +
Sbjct: 241 YGSIGAVIVFLVWLYLTSIIVITGGEINALLVSSREKD 278
>gi|299820568|ref|ZP_07052458.1| YihY family protein [Listeria grayi DSM 20601]
gi|299818063|gb|EFI85297.1| YihY family protein [Listeria grayi DSM 20601]
Length = 285
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 132/273 (48%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
F + + + D A+ ++ L S+FP ++ L GFL + ++ +V
Sbjct: 10 FFRFVQLLLARMKKNDVTGNAAQLAYYMLFSIFPLLLVAVALLGFLNLDK--DSIFQMVE 67
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ I I + QVL+ + GL ++ LA + +SNG+ A+ +LN+AY +++ R+
Sbjct: 68 DFAPKQIIDFIQTNLDQVLSNRSGGLLSVGILATLWSASNGMAAVMKALNKAYGIIDRRN 127
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I +L+S + + VT+ I + V ++ ++ + R ++L
Sbjct: 128 FIIQKLLSVLFTVAMLVTVAITLVLLVFGQQIGDFLLHSLHMPSQVIDVWNGLRELLSVL 187
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + F++ F P K I ++LPG +F I W + ++ F Y+ F Y+ Y +
Sbjct: 188 VILVVFTFLYWFAPNRKGTIKTVLPGALFASIGWSLASIGFAFYVNNFGNYTATYGSIGI 247
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ +++ ++ G+ I+G ELN ++ +K+
Sbjct: 248 VIVLMLWFFLTGIILIVGGELNGTLAFIKQKKE 280
>gi|70731937|ref|YP_261679.1| ribonuclease BN [Pseudomonas fluorescens Pf-5]
gi|68346236|gb|AAY93842.1| ribonuclease BN, putative [Pseudomonas fluorescens Pf-5]
Length = 316
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ + F+ ++ AS ++ L S+FPFI+F L GFL F +
Sbjct: 11 LHRVLIRTVNEFIADEMSTYASALAYQMLFSLFPFILFLIALIGFLHLPDFFTWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL +I + A + +S GV + ++N AY VVE R
Sbjct: 71 LVLPHEALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ +S Y + + L+ + + V P +A++ L + ++ +W R +
Sbjct: 130 IWKRFPLSVFYTVGIAGMLLAAAALMVLGPQVMAWLAGQV-GLEDFIVTLWTILRWPVIV 188
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + + + ++ +P + K I PG + + W+V ++ F +Y+ TF+ Y+ MY +
Sbjct: 189 LLMMVAVALMYYVMPDVQQKFRFITPGSVLAVVVWIVASLGFAYYVKTFANYNAMYGSIG 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+I+ L++ Y+ +LGAE+NA +
Sbjct: 249 AIIVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|170741936|ref|YP_001770591.1| ribonuclease BN [Methylobacterium sp. 4-46]
gi|168196210|gb|ACA18157.1| ribonuclease BN [Methylobacterium sp. 4-46]
Length = 348
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 7/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ ++ A A ++ ALL+VFP + +L G + + + ++ G
Sbjct: 53 DILWRVAWSVPQDRVLATAGGVAFFALLAVFPGLALIVSLYGLVADPGAIYKHLSLLTGL 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + + E+ +V L +S L A + +++GV AL +LN Y+ E R
Sbjct: 113 LPQAVLDLLAAELSRVAGKSTGALGAASGVSLLVAFWSANSGVSALFDALNVIYKEREKR 172
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+F + L + ++ + + VA+P+ L V A L ++ R A +
Sbjct: 173 PLLHFYATTFLFTLTGVLFALVATGMVVALPVVLNQVGFQSYASDAALRLL---RWPALL 229
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + +GL ++ + P+ +K + G + WV + LF+ Y+ F +Y+ MY L
Sbjct: 230 VLVSLGLAAIYRYGPSRHEAKWRWVTWGSGIAALLWVCASALFSWYVARFDSYNRMYGSL 289
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + +++ V +LGAELNA M R
Sbjct: 290 GAGVGFMTWIWFSIVIVLLGAELNAEMERQTVRD 323
>gi|319781313|ref|YP_004140789.1| ribonuclease BN [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167201|gb|ADV10739.1| ribonuclease BN [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 283
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 119/275 (43%), Positives = 168/275 (61%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++YDA+ HF +DGWAMASH+++++L+++FPF++F LA FLGA F
Sbjct: 1 MLRKIVALKRVLYDALGHFNTDDGWAMASHLAITSLMALFPFLIFATTLASFLGAQAFSD 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + +VF WPE IAKPI E+L VL V L T + AAYF+SNG+EALR SLNRAY
Sbjct: 61 TAVHLVFDTWPEQIAKPIAREVLNVLTVRRTDLLTYGVVLAAYFASNGIEALRTSLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R R+ S +VL+A+ + +S + V PL + + I
Sbjct: 121 RVSETRGIIYRRVQSIIFVLIATAGFLAISVLLVFAPLLARLAEAHIDWIKPYMGTITLW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + GL VH +LPA K + +S++PG++FT +W++G+ +F Y+ FS+Y T
Sbjct: 181 RYVIASAVIVGGLFAVHFWLPAGKRRFVSLVPGIVFTLAAWLIGSTIFATYLDHFSSYVT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
YAGLASIM +VFLYM+ FILG ELNA++ Y
Sbjct: 241 TYAGLASIMIAVVFLYMVSAIFILGGELNAAISRY 275
>gi|148381344|ref|YP_001255885.1| YihY family protein [Clostridium botulinum A str. ATCC 3502]
gi|153933068|ref|YP_001385721.1| YihY family protein [Clostridium botulinum A str. ATCC 19397]
gi|153935062|ref|YP_001389128.1| YihY family protein [Clostridium botulinum A str. Hall]
gi|148290828|emb|CAL84963.1| putative membrane-associated ribonuclease [Clostridium botulinum A
str. ATCC 3502]
gi|152929112|gb|ABS34612.1| YihY family protein [Clostridium botulinum A str. ATCC 19397]
gi|152930976|gb|ABS36475.1| YihY family protein [Clostridium botulinum A str. Hall]
Length = 285
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 127/278 (45%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ I+ I F+E++ A++S ++ + ++SVFPF++F L G+L H
Sbjct: 3 KNLSKIIPKSIKKLANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--ED 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P + + I +++ L + S + + +S G A+ LNRAY
Sbjct: 61 LLLGLKEIMPSNTYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYD 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ + ++ L + LV+ F+ V + I R
Sbjct: 121 VKERRSFVKVQTMTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +
Sbjct: 181 YIIMIGVTIFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRL 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + +++ LV+LY+ + I G E+NA ++ +
Sbjct: 241 YGSIGAVIVFLVWLYLTSIIVITGGEINALLVSSREKD 278
>gi|17986373|ref|NP_539007.1| ribonuclease BN [Brucella melitensis bv. 1 str. 16M]
gi|62290826|ref|YP_222619.1| ribonuclease BN [Brucella abortus bv. 1 str. 9-941]
gi|82700738|ref|YP_415312.1| ribonuclease BN [Brucella melitensis biovar Abortus 2308]
gi|189025045|ref|YP_001935813.1| Ribonuclease BN [Brucella abortus S19]
gi|237816340|ref|ZP_04595333.1| YihY family protein [Brucella abortus str. 2308 A]
gi|254690116|ref|ZP_05153370.1| Ribonuclease BN [Brucella abortus bv. 6 str. 870]
gi|254694606|ref|ZP_05156434.1| Ribonuclease BN [Brucella abortus bv. 3 str. Tulya]
gi|254696231|ref|ZP_05158059.1| Ribonuclease BN [Brucella abortus bv. 2 str. 86/8/59]
gi|254731149|ref|ZP_05189727.1| Ribonuclease BN [Brucella abortus bv. 4 str. 292]
gi|256045579|ref|ZP_05448459.1| Ribonuclease BN [Brucella melitensis bv. 1 str. Rev.1]
gi|256258370|ref|ZP_05463906.1| Ribonuclease BN [Brucella abortus bv. 9 str. C68]
gi|260546093|ref|ZP_05821833.1| ribonuclease BN [Brucella abortus NCTC 8038]
gi|260562890|ref|ZP_05833376.1| ribonuclease BN [Brucella melitensis bv. 1 str. 16M]
gi|260755655|ref|ZP_05868003.1| ribonuclease BN [Brucella abortus bv. 6 str. 870]
gi|260758880|ref|ZP_05871228.1| ribonuclease BN [Brucella abortus bv. 4 str. 292]
gi|260760604|ref|ZP_05872947.1| ribonuclease BN [Brucella abortus bv. 2 str. 86/8/59]
gi|260884680|ref|ZP_05896294.1| ribonuclease BN [Brucella abortus bv. 9 str. C68]
gi|261214930|ref|ZP_05929211.1| ribonuclease BN [Brucella abortus bv. 3 str. Tulya]
gi|265992003|ref|ZP_06104560.1| ribonuclease BN [Brucella melitensis bv. 1 str. Rev.1]
gi|297247212|ref|ZP_06930930.1| ribonuclease BN [Brucella abortus bv. 5 str. B3196]
gi|17981963|gb|AAL51271.1| ribonuclease bn [Brucella melitensis bv. 1 str. 16M]
gi|62196958|gb|AAX75258.1| ribonuclease BN, hypothetical [Brucella abortus bv. 1 str. 9-941]
gi|82616839|emb|CAJ11935.1| Ribonuclease BN [Brucella melitensis biovar Abortus 2308]
gi|189020617|gb|ACD73339.1| Ribonuclease BN [Brucella abortus S19]
gi|237788407|gb|EEP62622.1| YihY family protein [Brucella abortus str. 2308 A]
gi|260096200|gb|EEW80076.1| ribonuclease BN [Brucella abortus NCTC 8038]
gi|260152906|gb|EEW87998.1| ribonuclease BN [Brucella melitensis bv. 1 str. 16M]
gi|260669198|gb|EEX56138.1| ribonuclease BN [Brucella abortus bv. 4 str. 292]
gi|260671036|gb|EEX57857.1| ribonuclease BN [Brucella abortus bv. 2 str. 86/8/59]
gi|260675763|gb|EEX62584.1| ribonuclease BN [Brucella abortus bv. 6 str. 870]
gi|260874208|gb|EEX81277.1| ribonuclease BN [Brucella abortus bv. 9 str. C68]
gi|260916537|gb|EEX83398.1| ribonuclease BN [Brucella abortus bv. 3 str. Tulya]
gi|263003069|gb|EEZ15362.1| ribonuclease BN [Brucella melitensis bv. 1 str. Rev.1]
gi|297174381|gb|EFH33728.1| ribonuclease BN [Brucella abortus bv. 5 str. B3196]
Length = 286
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 182/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVKSVLTVQRHGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|108801303|ref|YP_641500.1| ribonuclease BN, putative [Mycobacterium sp. MCS]
gi|119870454|ref|YP_940406.1| putative ribonuclease BN [Mycobacterium sp. KMS]
gi|126437284|ref|YP_001072975.1| putative ribonuclease BN [Mycobacterium sp. JLS]
gi|108771722|gb|ABG10444.1| ribonuclease BN, putative [Mycobacterium sp. MCS]
gi|119696543|gb|ABL93616.1| putative ribonuclease BN [Mycobacterium sp. KMS]
gi|126237084|gb|ABO00485.1| putative ribonuclease BN [Mycobacterium sp. JLS]
Length = 350
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 7/271 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVF 67
F ++ F + +A+ ++ A+LS+FP ++ +L G G + ++D+V
Sbjct: 32 FYVLRKTAREFGHDQCTDLAAALTYYAVLSLFPAVLVMVSLLGVFGQGRRTTDALLDIVS 91
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I Q++ P+ G I L A + +S V A ++NR Y V E R
Sbjct: 92 DVAPASTVDTLRPTIEQLVESPSAGFALVIGILTALWSASGYVGAFGRAMNRIYEVAEGR 151
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVF-VAIPLALAYVRKFFPALGNLLLIIWN-GRIYA 184
+ R + A + +++F+ V+ P+A A LG + W+ GR
Sbjct: 152 PVWKLRPLQLVLTFAALLGAALVAFMLAVSGPVAEALGNAI--GLGEAAVTAWSIGRWPV 209
Query: 185 TMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + + + ++ P + K I G ++W+V +V F Y+ FS+Y+ Y
Sbjct: 210 ILLLVVVAVAVLYYATPNVQQPKFRWISLGAGLAILTWIVASVGFGFYVANFSSYNKTYG 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA ++ L++L++ + + GAEL+A +
Sbjct: 270 TLAGVIIFLLWLWITNLALLFGAELDAELER 300
>gi|260466711|ref|ZP_05812898.1| ribonuclease BN [Mesorhizobium opportunistum WSM2075]
gi|259029574|gb|EEW30863.1| ribonuclease BN [Mesorhizobium opportunistum WSM2075]
Length = 283
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 120/275 (43%), Positives = 167/275 (60%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++YDAI HF +DGWAMASH+++++L+++FPF++F L FLGA F
Sbjct: 1 MLRNIVALRRVLYDAIGHFNTDDGWAMASHLAITSLMALFPFLIFATTLGSFLGAQAFAD 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + +VF WP+ IAKPI E+L VL V L T L AAYF+SNG+EALR SLNRAY
Sbjct: 61 TAVHLVFDTWPDQIAKPIAHEVLNVLTVRRTDLLTYGVLLAAYFASNGIEALRTSLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R R+ S +VL+A+ + +S + V PL F + I
Sbjct: 121 RVTETRGIIYRRVQSIFFVLIATAGFLAISVLLVFAPLLARLAEAHFEWIKPYTGTITLW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + GL VH +LPA K + +S++PG+IFT +W++G+ +F Y+ FS+Y T
Sbjct: 181 RYVIASAVIIGGLFAVHYWLPAGKRRFVSLVPGIIFTLAAWLIGSTIFATYLDHFSSYVT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
YAGLASIM +VFLY++ FILG ELNA++ Y
Sbjct: 241 TYAGLASIMIAVVFLYIVSAIFILGGELNAAISRY 275
>gi|294851216|ref|ZP_06791889.1| yihY [Brucella sp. NVSL 07-0026]
gi|294819805|gb|EFG36804.1| yihY [Brucella sp. NVSL 07-0026]
Length = 286
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 183/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVKSVLTVQRRGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIVVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|23502826|ref|NP_698953.1| ribonuclease BN [Brucella suis 1330]
gi|148559336|ref|YP_001259795.1| YihY family protein [Brucella ovis ATCC 25840]
gi|161619896|ref|YP_001593783.1| YihY family protein [Brucella canis ATCC 23365]
gi|225628177|ref|ZP_03786212.1| YihY family protein [Brucella ceti str. Cudo]
gi|254704986|ref|ZP_05166814.1| YihY family protein [Brucella suis bv. 3 str. 686]
gi|254707499|ref|ZP_05169327.1| YihY family protein [Brucella pinnipedialis M163/99/10]
gi|254708961|ref|ZP_05170772.1| YihY family protein [Brucella pinnipedialis B2/94]
gi|254713610|ref|ZP_05175421.1| YihY family protein [Brucella ceti M644/93/1]
gi|254716036|ref|ZP_05177847.1| YihY family protein [Brucella ceti M13/05/1]
gi|254718029|ref|ZP_05179840.1| YihY family protein [Brucella sp. 83/13]
gi|256030488|ref|ZP_05444102.1| YihY family protein [Brucella pinnipedialis M292/94/1]
gi|256059950|ref|ZP_05450134.1| YihY family protein [Brucella neotomae 5K33]
gi|256158474|ref|ZP_05456372.1| YihY family protein [Brucella ceti M490/95/1]
gi|256253893|ref|ZP_05459429.1| YihY family protein [Brucella ceti B1/94]
gi|256370380|ref|YP_003107891.1| ribonuclease BN, putative [Brucella microti CCM 4915]
gi|260169395|ref|ZP_05756206.1| ribonuclease BN, putative [Brucella sp. F5/99]
gi|260567540|ref|ZP_05838010.1| ribonuclease BN [Brucella suis bv. 4 str. 40]
gi|261217804|ref|ZP_05932085.1| ribonuclease BN [Brucella ceti M13/05/1]
gi|261221030|ref|ZP_05935311.1| ribonuclease BN [Brucella ceti B1/94]
gi|261314982|ref|ZP_05954179.1| ribonuclease BN [Brucella pinnipedialis M163/99/10]
gi|261316460|ref|ZP_05955657.1| ribonuclease BN [Brucella pinnipedialis B2/94]
gi|261321348|ref|ZP_05960545.1| ribonuclease BN [Brucella ceti M644/93/1]
gi|261323921|ref|ZP_05963118.1| ribonuclease BN [Brucella neotomae 5K33]
gi|261755687|ref|ZP_05999396.1| ribonuclease BN [Brucella suis bv. 3 str. 686]
gi|261758917|ref|ZP_06002626.1| ribonuclease BN [Brucella sp. F5/99]
gi|265982976|ref|ZP_06095711.1| ribonuclease BN [Brucella sp. 83/13]
gi|265987530|ref|ZP_06100087.1| ribonuclease BN [Brucella pinnipedialis M292/94/1]
gi|265996990|ref|ZP_06109547.1| ribonuclease BN [Brucella ceti M490/95/1]
gi|306837589|ref|ZP_07470460.1| YihY family protein [Brucella sp. NF 2653]
gi|306842886|ref|ZP_07475523.1| YihY family protein [Brucella sp. BO2]
gi|306843415|ref|ZP_07476016.1| YihY family protein [Brucella sp. BO1]
gi|23348851|gb|AAN30868.1| ribonuclease BN, putative [Brucella suis 1330]
gi|148370593|gb|ABQ60572.1| YihY family protein [Brucella ovis ATCC 25840]
gi|161336707|gb|ABX63012.1| YihY family protein [Brucella canis ATCC 23365]
gi|225617002|gb|EEH14049.1| YihY family protein [Brucella ceti str. Cudo]
gi|256000543|gb|ACU48942.1| ribonuclease BN, putative [Brucella microti CCM 4915]
gi|260157058|gb|EEW92138.1| ribonuclease BN [Brucella suis bv. 4 str. 40]
gi|260919614|gb|EEX86267.1| ribonuclease BN [Brucella ceti B1/94]
gi|260922893|gb|EEX89461.1| ribonuclease BN [Brucella ceti M13/05/1]
gi|261294038|gb|EEX97534.1| ribonuclease BN [Brucella ceti M644/93/1]
gi|261295683|gb|EEX99179.1| ribonuclease BN [Brucella pinnipedialis B2/94]
gi|261299901|gb|EEY03398.1| ribonuclease BN [Brucella neotomae 5K33]
gi|261304008|gb|EEY07505.1| ribonuclease BN [Brucella pinnipedialis M163/99/10]
gi|261738901|gb|EEY26897.1| ribonuclease BN [Brucella sp. F5/99]
gi|261745440|gb|EEY33366.1| ribonuclease BN [Brucella suis bv. 3 str. 686]
gi|262551458|gb|EEZ07448.1| ribonuclease BN [Brucella ceti M490/95/1]
gi|264659727|gb|EEZ29988.1| ribonuclease BN [Brucella pinnipedialis M292/94/1]
gi|264661568|gb|EEZ31829.1| ribonuclease BN [Brucella sp. 83/13]
gi|306276106|gb|EFM57806.1| YihY family protein [Brucella sp. BO1]
gi|306286973|gb|EFM58490.1| YihY family protein [Brucella sp. BO2]
gi|306407296|gb|EFM63504.1| YihY family protein [Brucella sp. NF 2653]
Length = 286
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 183/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVKSVLTVQRRGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|256112306|ref|ZP_05453227.1| Ribonuclease BN [Brucella melitensis bv. 3 str. Ether]
gi|265993739|ref|ZP_06106296.1| ribonuclease BN [Brucella melitensis bv. 3 str. Ether]
gi|262764720|gb|EEZ10641.1| ribonuclease BN [Brucella melitensis bv. 3 str. Ether]
Length = 286
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 182/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVKSVLTVQRHGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLELFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|254700616|ref|ZP_05162444.1| YihY family protein [Brucella suis bv. 5 str. 513]
gi|261751125|ref|ZP_05994834.1| ribonuclease BN [Brucella suis bv. 5 str. 513]
gi|261740878|gb|EEY28804.1| ribonuclease BN [Brucella suis bv. 5 str. 513]
Length = 286
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 183/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVKSVLTVQHRGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|330807955|ref|YP_004352417.1| ribonuclease, ribonuclease_BN-like family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376063|gb|AEA67413.1| putative ribonuclease, Ribonuclease_BN-like family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 316
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 1/266 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ + F++++ AS ++ L S+FPFI+F L GFL F +
Sbjct: 11 LHRVMMRTVTEFLDDEMSTYASALAYQMLFSLFPFILFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A + +S GV + ++N AY VVE R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVVEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R +
Sbjct: 130 AWKRFPLSIFYTIGIAGMLLAAAALMVLGPQVMGWIAAQVGLETFIVTLWTIVRWPVIVF 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +
Sbjct: 190 LLMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLGFAFYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
I+ L++ Y+ +LGAE+NA +
Sbjct: 250 IIVLLLYFYISSAVLLLGAEMNAVIE 275
>gi|109900439|ref|YP_663694.1| putative ribonuclease BN [Pseudoalteromonas atlantica T6c]
gi|109702720|gb|ABG42640.1| putative ribonuclease BN [Pseudoalteromonas atlantica T6c]
Length = 320
Score = 209 bits (533), Expect = 4e-52, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 120/275 (43%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI+ ++ ++++ +A+ + LL+VFP +V ++ G L + + ++ + G
Sbjct: 21 WDILRRTVKKMLDDNLSLIAAGVGFYFLLAVFPLLVAFISIYGLLVSPDELQQHLNQLIG 80
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ + I+ ++ ++++ L T S L A + +S G +A+ + N Y +
Sbjct: 81 VVPDQGRQIISQQVERIMSKSNTALSTGVVFSTLFAVWSASKGAQAMVTACNITYGQNQN 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + ++ A + LV F +P+ +YV +++
Sbjct: 141 RGFLMMLVMRVLLTASAVMLLVAALFTIAVLPILFSYVGLHH----YASILVQWLTWPFL 196
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + L + + P + K + PG + WV + F+ Y+ F Y MY
Sbjct: 197 ALVFNLALSAFYRYGPHRSTAKWRWVTPGSLLASTLWVAFSFAFSFYLGQFGQYDKMYGS 256
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L S++ L++ Y+ +LGAE NA+M +
Sbjct: 257 LGSVVVLLMWFYLTAYIILLGAEFNAAMEHQTEKD 291
>gi|300114541|ref|YP_003761116.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299540478|gb|ADJ28795.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 328
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 119/269 (44%), Gaps = 8/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI Y + +++ +A+ ++ ALL++FP +V ++ G + V D + G
Sbjct: 27 RDIAYRIKDSLNDDNISIVAAGVAFYALLAIFPALVAMVSIYGIIADPADVQRQFDALSG 86
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +++++ ++ + + L + A + ++ G +A I+LN Y E
Sbjct: 87 ILPTEAQVLLSEQLRRITSQASTALSVGVGAGVILALWSATRGTKAFMIALNIVYGEKEK 146
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + I+ L A V ++ + V +P+ L+Y+ ++
Sbjct: 147 RGFLKLNAIALILTLGAIVLAILALGMIVVLPILLSYL----DLPEIFQVLASLLPWLLL 202
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+GL ++ + P+ +++ + G + + W+ G+ LF+ Y+ F+ Y+ Y
Sbjct: 203 AFTFILGLAVLYRYGPSRSEARWRWVSWGAVAATVLWIAGSALFSFYVANFAQYNKTYGS 262
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
+ +++ L++ ++ +L AE NA M
Sbjct: 263 VGALIILLMWFFVTAYIILLAAEFNAEME 291
>gi|316936222|ref|YP_004111204.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
gi|315603936|gb|ADU46471.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
Length = 297
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 111/276 (40%), Positives = 162/276 (58%), Gaps = 2/276 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGF+G+ +
Sbjct: 2 RQIRTAYAVAVDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFIGSRELADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP +A ++ EI VL G+ TI L A YF+SNGVE+LR+ LNRAY V
Sbjct: 62 AELLLDVWPAQVASTLSGEIHDVLTTTRGGVLTIGLLLALYFASNGVESLRVGLNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-GNLLLIIWNGR 181
VE R WY+ RL S GY L+A+ T + M F+ V PL LA R + P L N ++ R
Sbjct: 122 VEPRPWYLLRLESIGYTLVAAFTALAMGFLIVLGPLILATARHYVPVLVQNNEPLLTIAR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
+ AL + L +H +LPA + ILPG++FT + ++ V F Y+ F+ Y T
Sbjct: 182 YGIAITALTVALFLLHAYLPAGRRSFKQILPGIVFTIAASLISGVAFGMYLARFANNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
MYAGL S++ LVFLY + F+ G ELNA++I
Sbjct: 242 MYAGLGSVIIALVFLYFIAAIFVYGGELNAAIIKSR 277
>gi|163844000|ref|YP_001628404.1| YihY family protein [Brucella suis ATCC 23445]
gi|163674723|gb|ABY38834.1| YihY family protein [Brucella suis ATCC 23445]
Length = 286
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 127/280 (45%), Positives = 184/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+FG WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFGMWPSNIAAPIANEVKSVLTVQRRGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|77164583|ref|YP_343108.1| ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|254434849|ref|ZP_05048357.1| YihY family protein [Nitrosococcus oceani AFC27]
gi|76882897|gb|ABA57578.1| Ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|207091182|gb|EDZ68453.1| YihY family protein [Nitrosococcus oceani AFC27]
Length = 328
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 121/269 (44%), Gaps = 8/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI Y + +++ +A+ ++ ALL++FP +V ++ G + V D + G
Sbjct: 27 RDIAYRIKDSLDDDNISIVAAGVAFYALLAIFPALVAMVSIYGIIADPADVQRQFDALSG 86
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +++++ ++ + + L + + A + ++ G +A I+LN Y E
Sbjct: 87 ILPTEAQVLLSEQLRRITSQASTALSVGVGVGVILALWSATRGTKAFIIALNIVYGEKEK 146
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + I+ L A V ++ + V +P+ L+Y+ ++
Sbjct: 147 RGFLKLNAIALMLTLGAIVLAILALGMIVVLPILLSYL----DLPEIFQVLASLLPWLLL 202
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+GL ++ + P+ +++ + G + + W+VG+ LF+ Y+ F+ Y+ Y
Sbjct: 203 AFTFILGLAVLYRYGPSRSEARWRWVSWGAVAATVLWIVGSALFSFYVANFAQYNKTYGS 262
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
+ +++ L++ ++ +L AE NA M
Sbjct: 263 VGALIILLMWFFVTAYIILLAAEFNAEME 291
>gi|225853414|ref|YP_002733647.1| YihY family protein [Brucella melitensis ATCC 23457]
gi|256263106|ref|ZP_05465638.1| ribonuclease BN [Brucella melitensis bv. 2 str. 63/9]
gi|225641779|gb|ACO01693.1| YihY family protein [Brucella melitensis ATCC 23457]
gi|263093007|gb|EEZ17157.1| ribonuclease BN [Brucella melitensis bv. 2 str. 63/9]
gi|326409977|gb|ADZ67042.1| YihY family protein [Brucella melitensis M28]
gi|326539694|gb|ADZ87909.1| YihY family protein [Brucella melitensis M5-90]
Length = 286
Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 182/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAVPIANEVKSVLTVQRHGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|150376889|ref|YP_001313485.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
gi|150031436|gb|ABR63552.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
Length = 328
Score = 208 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 57/276 (20%), Positives = 124/276 (44%), Gaps = 10/276 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + + E+ +A+ ++ LLSVFP + ++ G + + +
Sbjct: 34 LRDVFWRVVAQVSEDRISLVAAGVTFYVLLSVFPALASLVSIYGLVSDPGTIAEQASYLA 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + +TD++ + + L F L A + + NGV AL ++N AY E
Sbjct: 94 AILPAQSLQLMTDQLKALASQNTSSLSLGFIGGLLFALWSARNGVSALFEAMNIAYDETE 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L+S G+ L + ++ +P L+++ II R
Sbjct: 154 KRGFIRLALLSIGFTLAGLILTAVLIGAIAVLPALLSFLDLKLQG------IISFARWPV 207
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + + ++ + P+ + +K+ + G + + W+V ++ F++YI F+ Y+ Y
Sbjct: 208 MLLLIAAVITLIYRYGPSREPAKLRWLTWGAALSTVCWLVASLAFSYYIDNFANYNATYG 267
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ ++++++ + I+GAELNA + R
Sbjct: 268 ALGALIGFMLWIWISTMIVIVGAELNAELEHQTARD 303
>gi|240851358|ref|YP_002972761.1| ribonuclease RNAse BN transmembrane protein [Bartonella grahamii
as4aup]
gi|240268481|gb|ACS52069.1| ribonuclease RNAse BN transmembrane protein [Bartonella grahamii
as4aup]
Length = 288
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 111/278 (39%), Positives = 172/278 (61%), Gaps = 1/278 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F + I+ DA+ H+ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P
Sbjct: 2 LRNIFWYSYRILVDAVSHYWRDNGSAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ EI+ VL + G+ T+S + AAYF+SNGVEALR +LNRAY
Sbjct: 62 QKIKALVQLLPDVIAEPLSQEIINVLTIQRGGVLTVSVIGAAYFASNGVEALRTALNRAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS R S +V+L +V L+++S + + PL + ++ + + +I
Sbjct: 122 RVVDRRSLLFCRFQSLFFVILGAVGLIVISVLLILTPLLIKIMQNHPFFITEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LF+ L+ VH +LPA + K + ILPG++ T W + ++ F Y+ F Y +
Sbjct: 182 RYIIAAVVLFVSLLIVHKWLPAERRKFIDILPGIVLTMFVWFMASIAFAQYLTMFD-YIS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YAGLASIM ++FLY+L FILG E+NA+++ +
Sbjct: 241 TYAGLASIMVAIIFLYILSAIFILGGEINAAIMFHRKH 278
>gi|163851653|ref|YP_001639696.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218530460|ref|YP_002421276.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|163663258|gb|ABY30625.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218522763|gb|ACK83348.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 315
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 105/278 (37%), Positives = 161/278 (57%), Gaps = 1/278 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
F + D+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G+
Sbjct: 17 SRFKKILDVTGIAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGSKSLADEA 76
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 77 GTLIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGI 136
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R W++TRL S GYV+ ++ ++ + + V PL + P L L L + GRI
Sbjct: 137 REARPWWLTRLESIGYVVCGALAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRI 196
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTM 241
T + + L+ H F+ A + ++S+LPG++ T W + + F +Y+ FS Y++
Sbjct: 197 GVTAFLIALVLVIAHKFVAAGRRPVLSVLPGIVVTLCLWFLAGLGFGYYLDRFSNAYAST 256
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y GLA+ M LVFLY L F+ G E+N ++I ++
Sbjct: 257 YGGLATAMIFLVFLYWLAAMFLFGGEINGTVIAARRQR 294
>gi|154244265|ref|YP_001415223.1| putative ribonuclease BN [Xanthobacter autotrophicus Py2]
gi|154158350|gb|ABS65566.1| putative ribonuclease BN [Xanthobacter autotrophicus Py2]
Length = 300
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 116/271 (42%), Positives = 159/271 (58%), Gaps = 1/271 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ I DA F +DGWA+ASHI+LSAL+S+FPF++F LAGFL I
Sbjct: 10 LRRIIHIPLDAFWTFAADDGWAIASHIALSALMSLFPFLIFVTALAGFLNLQPLANETIQ 69
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ WP+ +A PI+ EI V+ + T + A YFSSNG+E+LRI LNRAY V E
Sbjct: 70 LILETWPQQVAGPISREIYNVVNQVRTDVLTYGVVLAIYFSSNGIESLRIGLNRAYGVKE 129
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
MRSWY RL S GYVLLA+V+++ +SF+ V PL PAL I R A
Sbjct: 130 MRSWYWLRLESIGYVLLAAVSMLALSFLVVLGPLLWQAAVAQVPALAPFSGAITLIRFGA 189
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYA 243
T + L + L+ HL+LPA + + + PG++ T + W+V A F Y+ F + Y + YA
Sbjct: 190 TAIILVVSLVVAHLWLPAGRRSLAEVAPGILVTLVLWLVAATAFGFYLAEFPANYVSTYA 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
GLAS+M LVFLY+ F+ G ELNA++
Sbjct: 250 GLASVMIALVFLYLTASIFVFGGELNAAIKR 280
>gi|319409429|emb|CBI83078.1| ribonuclease RNAse bn transmembrane protein [Bartonella
schoenbuchensis R1]
Length = 284
Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats.
Identities = 115/278 (41%), Positives = 172/278 (61%), Gaps = 1/278 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ C I+ +A+ H+V ++G A ASHI LS LL+ FPF +FGA+LA F + P
Sbjct: 2 IKNVLCYGCRILINAVSHYVRDNGSAFASHIVLSGLLAFFPFCIFGASLASFFWDFAYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I+ + P+ IA+P + EI+ VL +GL T+S + AAYF+SNGVEALR +LN+AY
Sbjct: 62 QKIEALMHLLPDAIAEPFSKEIVNVLVTQRRGLLTLSFVGAAYFASNGVEALRAALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS + R S +V++ ++ + ++SF+ V PL + + FP + + +I
Sbjct: 122 RVVDQRSLFFCRFQSLFFVIIGTIGISVISFLLVLAPLLIKITQNHFPFIVEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ LFI L+ VH +LPA + K+ ILPG+I T W ++ F HY+ F Y +
Sbjct: 182 RYTIAVVVLFISLLIVHKWLPAKRRKLRDILPGIIVTLFLWFSASITFAHYLTMF-NYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YAGLASIM ++FLYML FILG E+NA+++ Y R
Sbjct: 241 TYAGLASIMIAIIFLYMLSAIFILGGEINAAIMFYRTR 278
>gi|110635357|ref|YP_675565.1| putative ribonuclease BN [Mesorhizobium sp. BNC1]
gi|110286341|gb|ABG64400.1| putative ribonuclease BN [Chelativorans sp. BNC1]
Length = 283
Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats.
Identities = 116/278 (41%), Positives = 173/278 (62%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ I+ DA HF +DGWAMASH+++SA++++FPF++F A LA FLGA F T
Sbjct: 2 RKLVALRRIVRDAFGHFNADDGWAMASHLAVSAIMALFPFLIFAAALASFLGADAFADTA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +VF WP+ +A+P+ E+ VL V + T + AA+F+SNGVEALR+SLNRAYRV
Sbjct: 62 VHIVFDTWPKEVAEPLAREVRNVLGVRRGDVLTFGVVLAAFFASNGVEALRLSLNRAYRV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS RL S G+VL+A++ +S + V P+A + + I R
Sbjct: 122 EERRSMIFLRLQSLGFVLIATLGFTAISVLLVIAPVAANIAVSRIEWIEPYMGTITLWRY 181
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ L L+ VH++LPA K+ I+PG+IFT + W+ G+ +F Y+ FS+Y+T Y
Sbjct: 182 IVAVVVLVFALVVVHIWLPAGSRKLTDIIPGIIFTLLGWIAGSSIFAAYLGRFSSYTTTY 241
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
AGLASIM +VFLY++ FILG E+NA+++ Y ++
Sbjct: 242 AGLASIMVAVVFLYIISAIFILGGEINAAIMRYREARR 279
>gi|188581440|ref|YP_001924885.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179344938|gb|ACB80350.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 317
Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats.
Identities = 105/278 (37%), Positives = 159/278 (57%), Gaps = 1/278 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ D++ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G
Sbjct: 20 SRLRKILDVMGLAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGTKSLADEA 79
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 80 GTLIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGI 139
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
EMR W++TRL S GYV+ + ++ + + V PL + P L L L + GRI
Sbjct: 140 REMRPWWLTRLESIGYVVCGAFAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRI 199
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTM 241
T + + L+ H F+ A + ++S+LPG+ T W + + F +Y+ FS Y++
Sbjct: 200 GVTAFLIALVLVIAHKFVAAGRRPVLSVLPGIAVTLGLWFLAGLGFGYYLDRFSNAYAST 259
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y GLA+ M LVFLY L F+ G E+N ++I ++
Sbjct: 260 YGGLATAMIFLVFLYWLAAMFLFGGEVNGTVIAARRQR 297
>gi|91978756|ref|YP_571415.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB5]
gi|91685212|gb|ABE41514.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB5]
Length = 384
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 120/268 (44%), Gaps = 8/268 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ + A+A+ ++ +LL++FP I + G + D + G
Sbjct: 90 DMLLRVVRKMSAHRIMALAAGMTYYSLLAIFPAIAALVAVYGLFADPSTIARHSDQLAGF 149
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P D++ +V + A+ L F I + + ++ +++L +LN Y E R
Sbjct: 150 LPGGALDVAQDQLTRVASNGAQTLGLTFLIGLGISLWSANAAMKSLFDTLNVVYGEEEKR 209
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ IS G+ + + ++ V IP+ L +V + G+ LL GR A
Sbjct: 210 GFVKLNAISLGFTIGGVLFVLAALGCIVMIPVILGFVG--MSSFGDRLLS--AGRWPAMY 265
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L + L ++ + P+ + + I G + W+ + LF+ Y +F ++ Y L
Sbjct: 266 LVLSVALAVIYRYGPSREATPWRWISWGSATAAMVWLAASTLFSWYAASFGQFNETYGSL 325
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+++ + +L+M + +LGAE++A++
Sbjct: 326 GAVVGFMTWLWMSAIVILLGAEIDAALE 353
>gi|254560152|ref|YP_003067247.1| hypothetical protein METDI1672 [Methylobacterium extorquens DM4]
gi|254267430|emb|CAX23269.1| conserved hypothetical protein; putative Ribonuclease BN domain
[Methylobacterium extorquens DM4]
Length = 347
Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 67/275 (24%), Positives = 134/275 (48%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI++ + + A A ++ ALL+VFP +V +L G + + + ++ G
Sbjct: 52 RDILWRVVLSLQRDRVLATAGGVAFFALLAVFPALVTIVSLYGLFSDPKAIGQHLSLLAG 111
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + ++++++++ L T +S + A + +++GV AL +LN YR E
Sbjct: 112 VLPNGVLDLLSEQLVRIARQSTGALSTASLLSMIIAFWSANSGVSALFDALNVIYREREK 171
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + +F + L V ++ + + V +P+ L + L + L I R A
Sbjct: 172 RSLVGFYVTTFLFTLTGIVFVLASTGMVVILPIVLNRIG--LGGLADTALRI--LRWPAL 227
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + L + + P+ + +K + G + +SWV +VLF+ Y+ +F +Y+ +Y
Sbjct: 228 LLLVSMSLSLTYRYGPSRREAKWRWVSWGSVAASLSWVCTSVLFSWYVASFDSYNRVYGS 287
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L + + + ++++ V +LGAELNA M R
Sbjct: 288 LGAGVGFMTWIWLSVVIVLLGAELNAEMERQTARD 322
>gi|302532125|ref|ZP_07284467.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
gi|302441020|gb|EFL12836.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
Length = 343
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 119/270 (44%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ +L++FP ++ +L G V+D +
Sbjct: 45 VLRGTLKEFKDDELADRAAALTYYGVLALFPALLVLVSLLGV-VGESTTKQVLDNLQKLT 103
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I++ + Q+ G L + L A + +S V A + N Y + E R
Sbjct: 104 PGAARDVISNAVQQLQGNAGVGSLLAIVGLLVAIWSASGYVAAFIRASNAVYDMPEGRPV 163
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G ++ V L + S + V LA +G+ + +W+ + +L
Sbjct: 164 WKVLPLRVGLTVVLMV-LAVASALIVVFTGGLARQAGSALGVGDTAMTVWSIAKWPVLLV 222
Query: 189 LFIGLI-FVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L G+I ++ P AK + + PG + + W+V + F Y+ F +Y+ Y LA
Sbjct: 223 LVTGMIALLYWAAPNAKGRGFRWVTPGSLLALVIWMVASAGFAFYVANFGSYNKTYGTLA 282
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A ++
Sbjct: 283 GVIIFLVWLWITNLAVLLGLEFDAELVRQR 312
>gi|327480116|gb|AEA83426.1| ribonuclease BN, putative [Pseudomonas stutzeri DSM 4166]
Length = 291
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 1/265 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ ++ F +D AS ++ L ++FPF+VF L GFL F +
Sbjct: 12 FTLLKRTLKEFSSDDMSTYASALAYRGLFAMFPFLVFLIALLGFLDLQNFFDWLRMQAEL 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A P V + I I Q L GL + L A + +S G +L +LNRAY V E R
Sbjct: 72 ALPPVAMEQINPVIDQ-LQEQQAGLLSFGILVALWTASIGFRSLMNALNRAYDVEEGRPT 130
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +++ Y +V L+ + + V P A+ ++ ++++ R +L
Sbjct: 131 WKLIILALAYTAGVAVLLLFTAGLMVIGPQAMEWLAGQVGMRELVVVLWTWLRWPVIVLM 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ P + + I PG + + W++ +V F Y+ F+ Y+ Y + +I
Sbjct: 191 LMLVVALLYYVAPDVEQEFRFITPGSVLAVLVWILASVAFGVYVQNFADYNATYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++LY+ + GAELNA +
Sbjct: 251 IVLLLYLYISAAVLLFGAELNAVIE 275
>gi|115526840|ref|YP_783751.1| ribonuclease BN [Rhodopseudomonas palustris BisA53]
gi|115520787|gb|ABJ08771.1| ribonuclease BN [Rhodopseudomonas palustris BisA53]
Length = 297
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 107/279 (38%), Positives = 165/279 (59%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+D+ DA F+ +DGWA+ASHI+LS+L+++FPF++ ++AGF+G+
Sbjct: 2 RQIRYAYDVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSIAGFVGSKNLADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP +A ++ +I VL TI L A YF+SNGVE+LR++LNRAY V
Sbjct: 62 AELMLQIWPVQVADALSVQIHDVLTTTRGDALTIGLLLAIYFASNGVESLRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GR 181
V+MRSWY RL S GY ++A+ T + M+F+ V PL L R++ P + + R
Sbjct: 122 VDMRSWYWLRLESIGYTMVAAFTALAMAFLIVLGPLLLETARRYVPLMVESNETLLTVVR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+ A+ + L +H +LP + ILPG++FT ++ ++ V F Y+ F+ Y T
Sbjct: 182 YGITIAAMTVALFILHAWLPCGRRTFRQILPGIVFTMLASLLSGVGFGMYLARFASNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNA++I K
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPK 280
>gi|328542071|ref|YP_004302180.1| ribonuclease rnase bn (Rbn) transmembrane protein [polymorphum
gilvum SL003B-26A1]
gi|326411821|gb|ADZ68884.1| Putative ribonuclease rnase bn (Rbn) transmembrane protein
[Polymorphum gilvum SL003B-26A1]
Length = 291
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 118/280 (42%), Positives = 174/280 (62%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + I + ++ DA+ HF +DGWAMASH++LS+LL++FP ++F A LAGFLG
Sbjct: 3 LSKRLVIGYRVLGDALGHFNRDDGWAMASHVALSSLLALFPLLIFIAALAGFLGLTGTAA 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V +++F AWPE +A P+ +EI +VL VP L T +AA +F+SNGVEA+R++LNRAY
Sbjct: 63 RVSELIFEAWPEQVAAPVANEIKKVLTVPRGDLLTFGVVAALWFASNGVEAVRVALNRAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV++ R + + RL S VLL S+ L+ +F+ V PLALA +FP L + I
Sbjct: 123 RVIDTRPFVLLRLQSILLVLLCSIGLIAFTFLMVLAPLALAAAHAWFPWLADFAGRINAV 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R A L GLI VH LPA + + + ILPGV T W+ F Y+ ++ Y +
Sbjct: 183 RYGAASLVAVAGLIVVHAVLPAGRRRFVDILPGVAATLALWLAAGAAFGAYLAGYADYVS 242
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLA +M+ LVFLY++ + ++G ELNA++I ++
Sbjct: 243 TYAGLAGVMSALVFLYIVALALLIGGELNAALIRQRDLRR 282
>gi|146343275|ref|YP_001208323.1| ribonuclease BN-like family transmembrane protein [Bradyrhizobium
sp. ORS278]
gi|146196081|emb|CAL80108.1| putative ribonuclease BN-like family transmembrane protein
[Bradyrhizobium sp. ORS278]
Length = 301
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 117/279 (41%), Positives = 170/279 (60%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ +F ++ DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGFLG+
Sbjct: 6 KALRYIFHVVMDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFLGSKDLADQA 65
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ WP +A +T EI VL TI A+ A YF+SNGVEALR++LNRAY V
Sbjct: 66 ATLILETWPAQVADALTGEIHDVLTTTRTDALTIGAVLAVYFASNGVEALRVALNRAYGV 125
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGR 181
+E R WY RL S GY L+A+VT + MSF+ V PL LA R+F P + + R
Sbjct: 126 IEQRRWYWLRLESIGYTLVAAVTALAMSFLIVLGPLMLATARRFLPLAVDANERFVNLSR 185
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+ AL + L +H +LPA + M I+PG++FT+++ +V ++F Y+ F+ Y T
Sbjct: 186 YGITISALIVALFILHAWLPAGRRSFMQIMPGIVFTFVASLVSGIVFGQYLARFANNYVT 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNAS+I +
Sbjct: 246 MYAGLASVIIALVFLYFIAAIFVYGGELNASIIKSRLPR 284
>gi|258652199|ref|YP_003201355.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
gi|258555424|gb|ACV78366.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
Length = 371
Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 6/268 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I F ++ +A+ ++ A+L++FP ++ +L G +G +I V+
Sbjct: 54 IARRTFREFSDDQCTDLAAALTYYAVLALFPALLALVSLLGLVGQQGQTDQLIGVLTDMG 113
Query: 71 PEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+A + + Q+ + GL I A + +S V A ++NR Y + E R +Y
Sbjct: 114 AGTVADTLRGPLQQLTENSSTGLALVIGVAGALWSASAYVGAFGRAMNRIYEIREGRPFY 173
Query: 130 ITRLISFGYVLLASVTL-VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R + L A + ++ + V+ P+A A LG + W + +L
Sbjct: 174 KLRPLMMVITLAAVILAGLVAIGLVVSGPVARAVGDAL--GLGETAVTAWGIAKWPVLLG 231
Query: 189 LF-IGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + + ++ P K I G ++WV+ + LF Y+ F+ Y+ Y LA
Sbjct: 232 LAALVVAILYYATPNVKQPTFRWISVGAGIAIVTWVIASALFGLYVSQFANYNKTYGSLA 291
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L++ + + GAEL+A M
Sbjct: 292 GVIVFLLWLWITNLALLFGAELDAEMER 319
>gi|217976474|ref|YP_002360621.1| ribonuclease BN [Methylocella silvestris BL2]
gi|217501850|gb|ACK49259.1| ribonuclease BN [Methylocella silvestris BL2]
Length = 288
Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 118/265 (44%), Positives = 163/265 (61%), Gaps = 1/265 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F ++YDA +FV++DGWA++SHI+LS L S+FPF++F LAGFLG+ + +
Sbjct: 2 RFMFHVLYDAAMNFVQDDGWAISSHIALSILTSMFPFLIFVTALAGFLGSADLSQEAVQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+F WPE +AKP+ E+ VL GL T+ + + YFSS+GVEALRI+LNRAY V E
Sbjct: 62 LFQTWPEQVAKPLASEVHNVLTQTRGGLVTLGGVLSIYFSSSGVEALRIALNRAYGVAET 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R WY+ RL S GYV++ +V L+ ++ V PL F P L L ++ R
Sbjct: 122 RPWYVLRLESIGYVMIGAVALLTLTLSVVFAPLIWTIALHFAPHLEPLDRLVTFSRFGIA 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAG 244
L L + L+ VH FLPA + + I PG++FT+ WV G +F Y+ F+ Y T YAG
Sbjct: 182 TLVLLLALVIVHKFLPAGRRTLWQIFPGIVFTFALWVAGGAIFGSYLAEFARNYVTTYAG 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
LAS+M LVFLYM+ FI G ELN
Sbjct: 242 LASVMIALVFLYMISSIFIAGGELN 266
>gi|148252707|ref|YP_001237292.1| ribonuclease BN-like family transmembrane protein [Bradyrhizobium
sp. BTAi1]
gi|146404880|gb|ABQ33386.1| putative ribonuclease BN-like family transmembrane protein
[Bradyrhizobium sp. BTAi1]
Length = 301
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 116/279 (41%), Positives = 169/279 (60%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ +F ++ DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGFLG+ +
Sbjct: 6 KALRYIFHVVMDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFLGSKELADQA 65
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ WP +A +T EI VL TI A+ A YF+SNGVEALR++LNRAY V
Sbjct: 66 ATLMLETWPAQVADALTGEIHDVLTTTRTDALTIGAVLAVYFASNGVEALRVALNRAYGV 125
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGR 181
+E R WY RL S GY L+A+ T + MSF+ V PL LA R++ P + R
Sbjct: 126 IEQRRWYWLRLESIGYTLVAAFTALAMSFLIVLGPLVLATARRYLPLAVEANERFVNLSR 185
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+ AL + L +H +LPA + M I+PG++FT+I+ +V ++F Y+ F+ Y T
Sbjct: 186 YGITISALIVALFILHAWLPAGRRSFMQIMPGIVFTFIASLVSGIVFGQYLARFANNYVT 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNAS+I +
Sbjct: 246 MYAGLASVIIALVFLYFIAAIFVYGGELNASIIKSRLPR 284
>gi|308172652|ref|YP_003919357.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7]
gi|307605516|emb|CBI41887.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus amyloliquefaciens DSM 7]
Length = 279
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + F +G + ++ ++ LLS+FP I+F L +L V+ V
Sbjct: 3 FMKELFARFSLHEGQSKSAELAYFFLLSLFPLIIFILTLTAYLPIS--AEDVLGAVDQYA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + Q L + GL + +A + +SNG+ A+ + N AY V E RS+ I
Sbjct: 61 PDSAMSMVKSITEQTLNKRSGGLLSFGIIAVIWSASNGMNAIVRAFNHAYEVEENRSFII 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S + VT++I + V F A G L + R + L L
Sbjct: 121 LRLTSIFLTIAMVVTILIALLLPVFGREIGLLAADFIGAPGLFLKVWSVVRWGISPLILL 180
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I +++F P + + +LPG +F W++ ++LF+ Y+ TF+ YS Y + I+
Sbjct: 181 IVFTALYIFAPNKRLSLRFVLPGAVFAAAGWIIVSMLFSFYVGTFANYSATYGSIGGIIV 240
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ Y+ G ILG E+NA + + RKK
Sbjct: 241 LMIWFYLTGTLLILGGEINALL---HKRKK 267
>gi|328552413|gb|AEB22905.1| integral inner membrane protein with ribonuclease fold [Bacillus
amyloliquefaciens TA208]
gi|328910764|gb|AEB62360.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus amyloliquefaciens LL3]
Length = 279
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + F +G + ++ ++ LLS+FP I+F L +L V+ V
Sbjct: 3 FMKELFARFSLHEGQSKSAELAYFFLLSLFPLIIFILTLTAYLPIS--AEDVLGAVDQYA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + Q L + GL + +A + +SNG+ A+ + N AY V E RS+ I
Sbjct: 61 PDSAMSMVKSITEQTLNKRSGGLLSFGIIAVIWSASNGMNAIVRAFNHAYEVEENRSFII 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S + VT++I + V F A G L + R + L L
Sbjct: 121 IRLTSIFLTIAMVVTILIALLLPVFGREIGLLAADFIGAPGLFLQVWSVVRWGISPLILL 180
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I +++F P + + +LPG +F W++ ++LF+ Y+ TF+ YS Y + I+
Sbjct: 181 IVFTALYIFAPNKRLSLRFVLPGAVFAAAGWIIVSMLFSFYVGTFANYSATYGSIGGIIV 240
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ Y+ G ILG E+NA + + RKK
Sbjct: 241 LMIWFYLTGTLLILGGEINALL---HKRKK 267
>gi|86748374|ref|YP_484870.1| ribonuclease BN, putative [Rhodopseudomonas palustris HaA2]
gi|86571402|gb|ABD05959.1| ribonuclease BN, putative [Rhodopseudomonas palustris HaA2]
Length = 356
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 60/269 (22%), Positives = 121/269 (44%), Gaps = 8/269 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ +A+ + LL++FP I + + + +
Sbjct: 80 VLRGTYARINDDRLMLVAAGVVFYGLLALFPGISALVSSYALFTDGGTINGHLQQLAAIV 139
Query: 71 PEVIAKPITDEILQVLAVPAK--GLFTISAL-AAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I D++ +VLA GL +S+L A + + GV+A+ + N Y E R
Sbjct: 140 PEGTYSVIEDQVGRVLANGETRLGLAFLSSLALALWSVNGGVKAVIDASNVVYDKQESRG 199
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S G+ + A ++ + +A P+AL+ + G ++I GR L
Sbjct: 200 FIKLNALSLGFTIGALAAVLSAIGLVIATPIALSMIGME----GQGAVLIGYGRWPLLAL 255
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
F GL ++ P + +LPG +F ++W+VG+ L ++Y+ F+ Y Y L
Sbjct: 256 LTFAGLAVLYRHAPDRDTPHWRWVLPGCVFATLAWIVGSALLSYYLGNFANYDATYGSLG 315
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ + +++++M + ++G ELNA + +
Sbjct: 316 AAIGLMIWMWMTAIVVLVGGELNAEIEMQ 344
>gi|297583355|ref|YP_003699135.1| ribonuclease BN [Bacillus selenitireducens MLS10]
gi|297141812|gb|ADH98569.1| ribonuclease BN [Bacillus selenitireducens MLS10]
Length = 290
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 57/276 (20%), Positives = 123/276 (44%), Gaps = 2/276 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ V + F +++ +A+ + +LS+FP ++ ++ + +
Sbjct: 4 KAIARSVIGFFKSLGQEFTKDNVPLLAAAQAYYYMLSLFPMLILILSIIPYFDLDPNI-- 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+++++ P IA I +I+ ++ GL T LA + +SNG+ + N AY
Sbjct: 62 VVELMYQFIPGEIASMIEGQIVNLVTEQRGGLLTFGILATIWSASNGMNTFIKAQNEAYN 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R ++ RL+S + L++ + V ++++ F L + R
Sbjct: 122 VKVQRPFWKARLVSIALTFGLILALIVALILPVMGDAIISFISSFGILTAELEELFRLLR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L + ++ P K LPG +F ++W + F+ YI F+ +S
Sbjct: 182 WVVSISLLAMIFAALYYLAPNTKIPFRYALPGALFATLAWQLTGFGFSIYISNFANFSQT 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y L I+ +++L+++G+ ++GAE+NA + +
Sbjct: 242 YGSLGGIIVLMLWLFLIGIVLVVGAEINAVLYRKHR 277
>gi|75674946|ref|YP_317367.1| ribonuclease BN [Nitrobacter winogradskyi Nb-255]
gi|74419816|gb|ABA04015.1| ribonuclease BN [Nitrobacter winogradskyi Nb-255]
Length = 297
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 112/279 (40%), Positives = 169/279 (60%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
++ I DA F+ +DGWA+ASHI+LSAL+++FPF++ LAGF G+ +
Sbjct: 2 RQIRDLYTIGTDAFYTFLADDGWAIASHIALSALMALFPFLIVLTALAGFFGSKELADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
D++ WP+ +A ++ EI VL T+ + A YF+SNGVE+LR++LNRAY V
Sbjct: 62 ADLMLQIWPDQVANTLSREIHDVLTTSRGDALTVGLVLAVYFASNGVESLRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-R 181
+E R WY RL S GY L+A+VT + M+F+ V PL +A R+ P + + N R
Sbjct: 122 IEPRRWYWLRLESIGYTLVAAVTTLAMAFLIVLGPLIIAAARRHVPLIVESNESLLNIAR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+LA+F L+ +H +LPA + + I+PG+IFT ++ ++ V F Y+ F+ Y T
Sbjct: 182 YGITILAMFTALVILHAWLPAGRRSFVQIIPGIIFTMLASLISGVGFGLYLARFANNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNA++I +
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVFGGELNAAIIKSRLPR 280
>gi|148253887|ref|YP_001238472.1| hypothetical protein BBta_2397 [Bradyrhizobium sp. BTAi1]
gi|146406060|gb|ABQ34566.1| putative membrane protein of unknown function with ribonuclease
domain [Bradyrhizobium sp. BTAi1]
Length = 352
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 55/274 (20%), Positives = 119/274 (43%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++Y ++ E A+A+ ++ LL++FP + + G + ++ + G
Sbjct: 59 DVLYRVYQNITEHRIVALAAGMTFYTLLAIFPALAALVAIYGLFSDPARITGHLEQLQGL 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P D++ +V A ++ L F IS + + ++ +++L +LN YR E R
Sbjct: 119 LPGGAIDIARDQLTRVSAKGSQALGLTFGISLAISLWSANAAMKSLFDTLNVVYREPETR 178
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ IS + A + ++ V +P+ L L++ GR A
Sbjct: 179 GFFKLNAISLLFTGGAILFALVAIGAIVVVPVVL----HSMGLSDAADLLLRIGRWPAIF 234
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + +GL ++ + P + K I G W+ G+ LF+ Y F +++ Y L
Sbjct: 235 VCVSLGLALIYRYGPDREEPKWRWISWGSALAAALWLGGSALFSWYAANFGSFNATYGSL 294
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + ++++ + ++G EL+A + R
Sbjct: 295 GAAIGFMTWIWISAIVILIGGELDAELEHQTLRD 328
>gi|332142226|ref|YP_004427964.1| putative ribonuclease protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552248|gb|AEA98966.1| putative ribonuclease protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 317
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 121/276 (43%), Gaps = 10/276 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ I+ +++ +A+ ++ LL++FP + L G + + Q + + +
Sbjct: 17 LKSWWSILKRIFSSVQKDNIPLIAAGVAFYCLLAIFPLLGATIALYGLMVSPQELQSHMT 76
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYR 121
+ P I +++ ++ L F + + + + SS G AL + N Y
Sbjct: 77 FLVNVVPTDSRYIIEEQLTNLIEKSNSTLGWGFLFTLVLSLWSSSKGANALIKACNITYG 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R ++ L + +T+++ +P ++ ++ + + + W
Sbjct: 137 ESEGRGFFKGILARVTCTVFMILTVIVALACITILPESIQWLSGNTVSAKEAMWVTW--- 193
Query: 182 IYATMLALF-IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML LF I L ++ + P + ++ + PG IF + WVV + F+ Y+ F +Y+
Sbjct: 194 --PVMLGLFNIALSALYRYAPHRREAQWRWVTPGSIFATVLWVVASYGFSIYLNEFGSYN 251
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y + I+ L++LY+ ++GAE+N+++ +
Sbjct: 252 KTYGSVGGIIILLMWLYLSAYIILIGAEVNSAIELQ 287
>gi|28868803|ref|NP_791422.1| ribonuclease BN [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969591|ref|ZP_03397727.1| ribonuclease BN [Pseudomonas syringae pv. tomato T1]
gi|302058803|ref|ZP_07250344.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato K40]
gi|302134492|ref|ZP_07260482.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28852042|gb|AAO55117.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925687|gb|EEB59246.1| ribonuclease BN [Pseudomonas syringae pv. tomato T1]
gi|331017340|gb|EGH97396.1| ribonuclease BN, putative [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 323
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 65/265 (24%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLLRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSELV 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + + ++ +W R A +L
Sbjct: 132 KRFPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIILL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|182680153|ref|YP_001834299.1| ribonuclease BN [Beijerinckia indica subsp. indica ATCC 9039]
gi|182636036|gb|ACB96810.1| ribonuclease BN [Beijerinckia indica subsp. indica ATCC 9039]
Length = 302
Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats.
Identities = 111/274 (40%), Positives = 162/274 (59%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + +A FVE+DGWA+ASHI+LSAL S+FPF++F LA FLG+ + +F
Sbjct: 17 ILSLFLEAFYRFVEDDGWAIASHIALSALTSMFPFLIFVTALAAFLGSQNLPEEAVTFLF 76
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP +A P+ EI VL GL T+S + A YFSS+GVEALRI+LNRAY V ++R
Sbjct: 77 NTWPAEVAGPLAQEIHNVLTQARGGLLTLSVVLAIYFSSSGVEALRIALNRAYDVKDVRP 136
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
WY+ RL S YV + + L+ + + V PL + +F P + L + R
Sbjct: 137 WYLLRLESIVYVFIGAFGLLTFALLIVLAPLIWEIILRFAPGMAPLQQYVTVLRFSIVTA 196
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLA 246
L + L+ +H +LPA + + I+ G++ T++ W+ G + F Y+ F+ Y T YAGLA
Sbjct: 197 ILLLALVIMHKYLPAGRRHLRDIIVGILLTFVLWIAGGMAFGSYLAEFARNYVTTYAGLA 256
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S+M LVF YML FI G ELNA+++ + RK+
Sbjct: 257 SVMIALVFFYMLACIFIYGGELNAAILRHSRRKQ 290
>gi|209964739|ref|YP_002297654.1| ribonuclease BN family protein [Rhodospirillum centenum SW]
gi|209958205|gb|ACI98841.1| ribonuclease BN family protein [Rhodospirillum centenum SW]
Length = 327
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 58/275 (21%), Positives = 119/275 (43%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I+ + ++ W +A+ ++ LL++FP + +L G + Q V + +
Sbjct: 35 WSILKRTLAESSRDNVWVVAAGVAFLTLLAIFPALTATFSLYGLVADPQQVEEQVAALAS 94
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + ++ + + L I A + +S GV+AL +LN Y E
Sbjct: 95 VLPAQGREVLVGQLHALAGQSGEALGFGLVIGLGIALWSASGGVKALMSALNIVYEEEEK 154
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ + L + L+ + V +A P+ L ++ G +++ R
Sbjct: 155 RSFLHFTGTALALTLGFILLLIFLIAVVIATPVVLGFLGLG----GTADVLVRLLRWPLL 210
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L ++ + P+ +++ + G + W+VG++ F+ YI F+ Y+ Y
Sbjct: 211 ACGIAGALAVLYRYGPSRARARWRWVSWGSAAATLLWIVGSIAFSLYITHFADYNATYGS 270
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L + + L++LY+ +LGAEL+A M R
Sbjct: 271 LGAGIILLLWLYLGAYAVLLGAELDAEMEHQTARD 305
>gi|167644948|ref|YP_001682611.1| ribonuclease BN [Caulobacter sp. K31]
gi|167347378|gb|ABZ70113.1| ribonuclease BN [Caulobacter sp. K31]
Length = 414
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 118/269 (43%), Gaps = 9/269 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI++ + A+A ++ LL++FP I +L G V + +
Sbjct: 87 RDIVWRTGREVSVDRLPAVAGGVTFYTLLAIFPAIGAFVSLYGLFADIGGVEKQLREMSS 146
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+P + I +++L++ + L F +S L + + ++ ++AL LN AY E
Sbjct: 147 VFPASVVNIIGEQMLRLASQEQAKLGVAFVVSLLLSIWSANASMKALFDGLNVAYDEDEK 206
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++ ++ + A V VI++ V + P+ + + L + R
Sbjct: 207 RNFVAKTAWTYAFTFCALVYAVILAGVLIGAPIVMERI-----GLSAAAAVWIPLRWLIV 261
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ ++ F P + + ++ G +F +W++G++ F+ Y+ + Y Y
Sbjct: 262 LAVTAFAFAMLYRFAPCRARPRWRWVIWGAVFGAAAWLLGSLGFSLYVNNIAHYDATYGP 321
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
L +++ +V+++ + ++GAELNA +
Sbjct: 322 LGAVIAFMVWMWFSILTVLIGAELNAEIE 350
>gi|330967398|gb|EGH67658.1| ribonuclease BN [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 323
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 65/265 (24%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSELV 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + + ++ +W R A +L
Sbjct: 132 KRFPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIILL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|154685267|ref|YP_001420428.1| YfkH [Bacillus amyloliquefaciens FZB42]
gi|154351118|gb|ABS73197.1| YfkH [Bacillus amyloliquefaciens FZB42]
Length = 279
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I + F +G + ++ ++ LLS+FP ++F L +L V+ V
Sbjct: 3 FIKELFARFSLHEGQSKSAELAYFFLLSLFPLMIFMLTLTAYLPIS--AEDVLGAVDQYA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + Q L + GL + +A + +SNG+ A+ + N AY V E RS+ I
Sbjct: 61 PDSAMSMVKSITEQTLNKRSGGLLSFGIIAVIWSASNGMNAIVRAFNHAYEVEENRSFII 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S + VT++I + V F A G L + R + L L
Sbjct: 121 IRLTSIFLTIAMVVTILIALLLPVFGREIGMLAADFIGASGLFLQVWSVVRWGISPLILL 180
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I +++F P + + +LPG +F W++ ++LF+ Y+ TF+ YS Y + I+
Sbjct: 181 IVFTALYIFAPNKRLSLRFVLPGAVFAAAGWIIVSMLFSFYVGTFANYSATYGSIGGIIV 240
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ Y+ G ILG E+NA + + RKK
Sbjct: 241 LMIWFYLTGTLLILGGEINALL---HKRKK 267
>gi|163850547|ref|YP_001638590.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218529263|ref|YP_002420079.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|163662152|gb|ABY29519.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218521566|gb|ACK82151.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 347
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI++ + + A A ++ ALL+VFP + +L G + + ++ G
Sbjct: 52 RDILWRVVLSLQRDRVLATAGGVAFFALLAVFPALATIVSLYGLFSDPTAIGQHLSLLAG 111
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + ++++++++ L T +S + A + +++GV AL +LN YR E
Sbjct: 112 VLPNGVLDLLSEQLVRIARQSTGALSTASLLSMIIAFWSANSGVSALFDALNVIYREREK 171
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + +F + L V ++ + + V +P+ L+ + L + L I R A
Sbjct: 172 RSLVGFYVTTFLFTLTGIVFVLASTGMVVILPIVLSRIG--LGGLADTALRI--LRWPAL 227
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + L + + P+ + +K + G + +SWV +VLF+ Y+ +F +Y+ +Y
Sbjct: 228 LLLVSLSLSLTYRYGPSRREAKWRWVSWGSVAASLSWVCTSVLFSWYVASFDSYNRVYGS 287
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L + + + ++++ V +LGAELNA M R
Sbjct: 288 LGAGVGFMTWIWLSVVIVLLGAELNAEMERQTARD 322
>gi|206974201|ref|ZP_03235118.1| YihY family protein [Bacillus cereus H3081.97]
gi|206747441|gb|EDZ58831.1| YihY family protein [Bacillus cereus H3081.97]
Length = 289
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 14 YSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLLEP 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E RS+
Sbjct: 72 YVPEDAMSLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETRSF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
TR +S + L +V V V + A V K + + R+ A+
Sbjct: 132 IKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASFFV 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ +Y GL I
Sbjct: 192 LFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANIYGGLGGI 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ Y+ G +LG E+N + Y
Sbjct: 252 IILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|114704910|ref|ZP_01437818.1| hypothetical protein FP2506_08236 [Fulvimarina pelagi HTCC2506]
gi|114539695|gb|EAU42815.1| hypothetical protein FP2506_08236 [Fulvimarina pelagi HTCC2506]
Length = 373
Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats.
Identities = 55/268 (20%), Positives = 116/268 (43%), Gaps = 8/268 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI F E+ +A+ + LL++FP +L GF+ + I +
Sbjct: 65 DIGLRLYSSFFEDRVMLIAAGATFYLLLALFPAFAVFVSLYGFVSDPATISDHIAFIGQF 124
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + + ++ + L F L A + ++NG++ L ++N AY E R
Sbjct: 125 LPQAGTELLESQLDTLARQDPASLSVGFLTGFLFAMWSANNGIKTLFEAMNVAYGETEQR 184
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ ++F + + + +++ IP + K + I R
Sbjct: 185 SFLKLNAVAFCFTIGMIIVGIVLITAIGVIPA----IMKILGLQTFSEIFIAALRWPVVF 240
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ K + ++ G T W+V ++ F+ Y+ F+ Y+ Y L
Sbjct: 241 LLIVAAIAAIYRYGPSRKRARWKWVIGGAFLTAFVWLVASISFSWYLQNFANYNATYGSL 300
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+++ ++++++ V FI+GAE+NA M
Sbjct: 301 GAVIGFMMWVWVSSVIFIIGAEVNAEME 328
>gi|94968858|ref|YP_590906.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
gi|94550908|gb|ABF40832.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
Length = 341
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 107/264 (40%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ + A A ++ +LS+FP ++ A + L ++ V
Sbjct: 48 NVLRRSAVDIDNNHIMAFAGSLAYYFVLSLFPALIALAAVVSLLPMPDLFQNIMSVFGRV 107
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ K ++ + V+ + L + + + + +S+G + SLN AY V E R+W+
Sbjct: 108 LPDESMKLVSKVVADVIRPHSGRLLSFGLIGSLWTASSGFSGMIESLNVAYGVPETRAWW 167
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
TRL++ G LL L + P L LL R +
Sbjct: 168 KTRLLAIGLTLLVGGMLTVSILCMTVGPHFLEIFADKIGFGPMFLLTWKIVRWPIAFALV 227
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ P + M L G + +WVV ++ Y F+ ++ Y L + +
Sbjct: 228 VLSIEAIYFLAPNVRQHFMHTLTGALIAVGAWVVLSLALGVYFGKFAHFNKTYGVLGAAI 287
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L +LY + ++G E+N+ +I
Sbjct: 288 GLLTWLYWTSLAILVGGEVNSEII 311
>gi|330957628|gb|EGH57888.1| ribonuclease BN [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 323
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + ++ +W R A +L
Sbjct: 132 KRFPLSILYTIGIAGMLLAAAAFMVLGPQVMNWIAAQV-GMEEFIVTLWTILRWPAIILL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L I + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMIAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|39937810|ref|NP_950086.1| ribonuclease BN [Rhodopseudomonas palustris CGA009]
gi|192293593|ref|YP_001994198.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
gi|39651670|emb|CAE30192.1| putative ribonuclease RNAse BN (RBN) transmembrane protein
[Rhodopseudomonas palustris CGA009]
gi|192287342|gb|ACF03723.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
Length = 297
Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 106/276 (38%), Positives = 165/276 (59%), Gaps = 2/276 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + DA+ F+ +DGWA+ASHI+LS L+++FPF++ +LAGF+G+ + +
Sbjct: 2 RQIRYAYAVAVDALYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFVGSRELADSA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP +A ++ EI VL G+ TI + A YF+SNGVE+LR+ LNRAY V
Sbjct: 62 AELLLDVWPAQVASTLSGEIHDVLTTTRGGVLTIGLVLALYFASNGVESLRVGLNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-GNLLLIIWNGR 181
+E R WY+ RL S GY L+A+ T + M F+ V PL +A R + P L + ++ R
Sbjct: 122 IEPRPWYLLRLESIGYTLVAAFTALAMGFLIVLGPLIVATARHYVPLLVHDNEPLLTFAR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
+ AL + L +H +LPA + ILPG++FT + ++ + F Y+ F+ Y +
Sbjct: 182 YGIAITALTVALFLLHAYLPAGRRSFRQILPGIVFTITASLISGMTFGMYLARFANNYVS 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
MYAGLAS++ LVFLY + F+ G ELNA++I
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSR 277
>gi|301383365|ref|ZP_07231783.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato Max13]
Length = 323
Score = 205 bits (523), Expect = 5e-51, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLLRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSELV 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + + ++ +W R A +L
Sbjct: 132 KRFPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIILL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+ ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIFASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|108803594|ref|YP_643531.1| ribonuclease BN [Rubrobacter xylanophilus DSM 9941]
gi|108764837|gb|ABG03719.1| ribonuclease BN, putative [Rubrobacter xylanophilus DSM 9941]
Length = 328
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ +E +D MA+ ++ +L++FPF++ +L G + + V+
Sbjct: 38 LRALRATVEKLQRDDAAGMAAQLAYYLILALFPFMLVLVSLMGTFSSPELAEEVLAYFRQ 97
Query: 69 AWPEVIAKPITDEILQVLAV--PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + I V+ PA GL + L + +S AL +LN AY V E R
Sbjct: 98 VLPQQVYALIATYTGDVIRGEHPAPGLLSFGILLTLWSASGAFNALIKALNAAYEVQETR 157
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ R ++ G L S + + + V P + +FF R +
Sbjct: 158 PFWKVRALAVGMTLGLSGLIFLGVLLMVFGPPIGEAIARFFGLGTVFEAAWNVARWPVAL 217
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L + + ++ PA I PG + + WVV + F+ Y+ F +Y+ Y +
Sbjct: 218 LFLVVTVALIYYLAPAVDQPFRWITPGGLVAVLLWVVASAAFSFYVNNFGSYNKTYGSIG 277
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
+ L++LY+ + + GA LNA++
Sbjct: 278 VAIVLLLYLYISSLTILFGAALNATLAR 305
>gi|269838968|ref|YP_003323660.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
gi|269790698|gb|ACZ42838.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
Length = 363
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 6/280 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M E +V D + ++ E+ A H++ S L +VFPF+VF +L G A + V
Sbjct: 23 MTERLGLV-DFVKQVLKEAQEDHLSVFAGHLTYSGLFAVFPFMVFLLSLLGIFRAEELVN 81
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT----ISALAAAYFSSNGVEALRISL 116
++ A P I I Q+ A G F +S L A + S ++ ++
Sbjct: 82 ELLSRASTAMPREAVDLIGGPIRQIAQSKATGAFGLSALVSILLALWGVSGAFRSVMEAM 141
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N Y V E R ++ LIS L A+V ++ + V + + LG +
Sbjct: 142 NVMYEVKEGRPFWKRYLISILLSLGAAVLIIAALVLVVFGADIATAIARASAGLGPVFRW 201
Query: 177 IWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
W + + + ++ F P + + I PG + W+V ++LF+ Y+ F
Sbjct: 202 TWIILQWPVLVGFVLLAFALIYYFAPDVEQQFRFITPGSLVAVALWLVFSLLFSLYVNNF 261
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y+ Y LA ++ ++++Y +LG E+N + +
Sbjct: 262 GSYNKTYGALAGVIILMLYMYYSAYILLLGTEINQVIEEH 301
>gi|302869239|ref|YP_003837876.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|302572098|gb|ADL48300.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
Length = 363
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ ++ F ++ A+ ++ +LS+FP ++ ++ G LG + V D V A P
Sbjct: 65 LKRTVQEFQDDSLTDWAAALTYYGVLSIFPGVLVLISVLGLLG-ERATEGVRDTVGQAVP 123
Query: 72 EV-IAKPITDEILQVLAVPAKGLFTI----SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
E I + I I Q A + GL +I +AA + +S V A + N Y V E R
Sbjct: 124 EENIRRIIESAIDQ--AGQSGGLASIAAIVGLVAAFWSASGYVAAFMRASNSIYDVPEGR 181
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ T + G + V L+I + + V LG + +WN + +
Sbjct: 182 PIWKTLPVRLGVTAVIGVMLLISAVIVVFTGGLAEQAGNAI-GLGETAVTVWNIAKWPVL 240
Query: 187 LALF-IGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L + ++ P A+ + PG + + W+V + LF Y+ F +Y+ Y
Sbjct: 241 LVLVSLMFAILYWASPNARHGGFRWVSPGGVLAVVLWLVVSGLFALYVSNFGSYNKTYGA 300
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+A ++ LV+L++ V +LGAE +A +
Sbjct: 301 VAGVIIFLVWLWLSNVAILLGAEFDAELERSR 332
>gi|182416151|ref|YP_001821217.1| ribonuclease BN [Opitutus terrae PB90-1]
gi|177843365|gb|ACB77617.1| ribonuclease BN [Opitutus terrae PB90-1]
Length = 331
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 109/274 (39%), Gaps = 7/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D++ +++ +A+ ++ ++ P + + G + V + +
Sbjct: 37 RDVLLRTKNELAKDNLSIVAAGVAFYCFMAFVPMLGAIVSTYGLVADPVQVSEHAEALAQ 96
Query: 69 AWPEVIAKPITDEILQVLAVP-AKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + +++ ++ + A G+ +S L A Y S+ +AL LN AY E R
Sbjct: 97 VVPAEVMPLLREQMQRLTSAGEAAGIGALVSLLLAVYASAKATKALITGLNIAYDEEERR 156
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + ++ L A + V+ + +P V + R +
Sbjct: 157 GFVRLQAVALALTLGAVLGAVLALGLVAVLPS----VAGHLGWSDAAGTAVNWLRWPLLV 212
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+GL ++ F P+ + G + W+V ++ F+ Y+ T Y Y L
Sbjct: 213 GGFMLGLGVLYRFGPSRNPPQWRWLSAGAVVATGLWIVASLGFSFYVSTLGNYEKTYGSL 272
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ L++LY+ G +LGAELNA M +
Sbjct: 273 GALVVFLLWLYLTGYVVLLGAELNAEMERQTEKD 306
>gi|315504286|ref|YP_004083173.1| ribonuclease bn [Micromonospora sp. L5]
gi|315410905|gb|ADU09022.1| ribonuclease BN [Micromonospora sp. L5]
Length = 363
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 11/272 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F ++ A+ ++ +LS+FP ++ ++ G LG + V D V A P
Sbjct: 65 LKRTVREFQDDSLTDWAAALTYYGVLSIFPGVLVLISVLGLLG-DRATEGVRDTVGQAVP 123
Query: 72 EV-IAKPITDEILQVLAVPAKGLFTI----SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
E I + I I Q A + GL +I +AA + +S V A + N Y V E R
Sbjct: 124 EENIRRIIESAIDQ--AGQSGGLASIAAIVGLVAAFWSASGYVAAFMRASNSIYDVPEGR 181
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ T + G + V L+I + + V LG + +WN + +
Sbjct: 182 PIWKTLPVRLGVTAVIGVMLLISAVIVVFTGGLAEQAGNAI-GLGETAVTVWNIAKWPVL 240
Query: 187 LALF-IGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L + ++ P A+ + PG + + W+V + LF Y+ F +Y+ Y
Sbjct: 241 LVLVSLMFAILYWASPNARHGGFRWVSPGGVLAVVLWLVVSGLFALYVSNFGSYNKTYGA 300
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+A ++ LV+L++ V +LGAE +A +
Sbjct: 301 VAGVIIFLVWLWLSNVAILLGAEFDAELERSR 332
>gi|314936062|ref|ZP_07843411.1| YihY family protein [Staphylococcus hominis subsp. hominis C80]
gi|313655879|gb|EFS19622.1| YihY family protein [Staphylococcus hominis subsp. hominis C80]
Length = 402
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++FP ++F L + D+V
Sbjct: 66 NFLSYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDP--QQIKDLVSQN 123
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A +T + + + L ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 124 APAETADVVTKIFKDITSNSSGSLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDARNPI 183
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ ++ L I + ++ + I RI ++ +
Sbjct: 184 VLKLLSILFTIVMAIVLAIALTLPTFGNFIKDHLFGPLGLDQQVAWIFDLVRILLPLIVI 243
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + ++ P K+K S+ PG IFT I W++G+ F Y+ F YS Y LA I+
Sbjct: 244 IILFLTLYSVAPNVKTKFKSVYPGAIFTSIVWLLGSFAFGWYLSNFGNYSKTYGSLAGII 303
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+++Y+ I+GAE+NA + + K
Sbjct: 304 ILLLWIYITCFIIIIGAEINAVIHQRHVIK 333
>gi|297531287|ref|YP_003672562.1| ribonuclease BN [Geobacillus sp. C56-T3]
gi|297254539|gb|ADI27985.1| ribonuclease BN [Geobacillus sp. C56-T3]
Length = 277
Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats.
Identities = 64/270 (23%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I + + F E++ +++ ++ LLS+FPF++F L +L V+ +V
Sbjct: 7 FIRELVRRFTEDEIPRLSAELAYYFLLSLFPFLLFLMTLLAYLPIPH--EDVLALVRQYA 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + +++ GL + S +AA + +SNG+ A+ + NRAY V E R ++I
Sbjct: 65 PKEALHLIETNVHRLIDEQNGGLLSFSIIAAIWSASNGMSAIMRAFNRAYDVQEDRPFWI 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S L + +++ + V + ++ L + R + L LF
Sbjct: 125 VRGLSIVLTLGMIMVIIVALVLPVFGRIIGLFLFSALGLSQQFLEVWNAFRWVTSSLLLF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L ++
Sbjct: 185 AVFTALYYFAPNKQLRCVNVVRGALFATAGWIAASLAFAYYVNNFADYTAMYGSLGGMIV 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+V+ Y+ G+ +LG ELNA K+
Sbjct: 245 LMVWFYLSGMILVLGGELNAMFDCEREGKR 274
>gi|90426068|ref|YP_534438.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB18]
gi|90108082|gb|ABD90119.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB18]
Length = 351
Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 118/267 (44%), Gaps = 8/267 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ ++ A+A+ LL++FP I + + + ++ G
Sbjct: 61 ILVTLYHRTNDDRLLAVAAGTVFYGLLALFPAITALVSSYALFSDGNTINQHLSLLAGLV 120
Query: 71 PEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I D++ +VLA L T S A + ++ G++A+ SLN Y E R
Sbjct: 121 PAGAFSIIQDQVGRVLAKGDVKLGTAFLFSMALALWSANGGMKAIIDSLNVVYGEQEKRG 180
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ +S + L + ++ + VA P+ L+ V +I GR A +
Sbjct: 181 FFKLNAVSLAFTLGSLAAVLAAIGLVVAAPIVLSMVGLG----ATADALIRYGRWPALAV 236
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ GL ++ + P+ + I PG + +SW+ G+ ++Y+ F+ Y Y L
Sbjct: 237 LVLFGLAVLYRYGPSLTAPQWRWISPGSVAAALSWLAGSAALSYYLANFANYDATYGSLG 296
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+ + +V+++M + +LGA+LN+++
Sbjct: 297 AAIGLMVWMWMTTIVVLLGAQLNSAID 323
>gi|49474789|ref|YP_032831.1| ribonuclease RNAse BN transmembrane protein [Bartonella quintana
str. Toulouse]
gi|49240293|emb|CAF26771.1| Ribonuclease RNAse bn transmembrane protein [Bartonella quintana
str. Toulouse]
Length = 284
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 109/276 (39%), Positives = 172/276 (62%), Gaps = 1/276 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R+ F + ++ DA+ H+ ++G A ASH++LS LL+ FPF +FG +LA F A + P
Sbjct: 2 LRDIFWYSYRVLVDAVSHYWRDNGSAFASHVALSGLLAFFPFFIFGTSLASFSSAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ EI+ VL + G+ T+S + AAYF+SNG+EALR +LN+AY
Sbjct: 62 QKIKALVQLLPDVIAEPLSKEIINVLTIQRGGVLTVSVIGAAYFASNGIEALRTALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS R S +V++ ++ LV++SF+ + PL + ++ + + +I
Sbjct: 122 RVVDRRSLLFCRFQSLFFVIVGAIGLVVISFLLILAPLLIKIMQNHSFFITEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LF+ L+ VH +LPA + K + ILPG++ T W + ++ F HY+ F Y +
Sbjct: 182 RYIIAAVVLFVSLLIVHKWLPAGRRKFIDILPGIVVTMFVWFMASIAFAHYLTMF-NYIS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
YAGL SIM ++FLYML FILG E+NA++I Y
Sbjct: 241 TYAGLTSIMVAIIFLYMLSAIFILGGEINAAIIFYR 276
>gi|289676936|ref|ZP_06497826.1| ribonuclease BN [Pseudomonas syringae pv. syringae FF5]
gi|330896887|gb|EGH28477.1| ribonuclease BN [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330942464|gb|EGH45061.1| ribonuclease BN [Pseudomonas syringae pv. pisi str. 1704B]
Length = 321
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + + ++ +W R A ++
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIIIL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|56418955|ref|YP_146273.1| transporter [Geobacillus kaustophilus HTA426]
gi|56378797|dbj|BAD74705.1| transporter [Geobacillus kaustophilus HTA426]
Length = 277
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I + F E++ +++ ++ LLS+FPF++F L +L V+ +V
Sbjct: 7 FIRELARRFTEDEIPRLSAELAYYFLLSLFPFLLFLMTLLAYLPIPH--EDVLALVRQYA 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + +++ GL + S +AA + +SNG+ A+ + NRAY V E R ++I
Sbjct: 65 PKEALHLIETNVYRLMNEQNGGLLSFSIIAAIWSASNGMSAIMRAFNRAYDVQEDRPFWI 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S L V +++ + V + ++ L + R + L LF
Sbjct: 125 VRGLSIVLTLGMIVVIIVALVLPVFGRIIGLFLFSALGLSQQFLEVWNAFRWVTSSLLLF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L ++
Sbjct: 185 AVFTALYYFAPNKQLRCVNVVRGALFATAGWIAASLAFAYYVNNFADYTAMYGSLGGMIV 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+V+ Y+ G+ +LG ELNA K+
Sbjct: 245 LMVWFYLSGMILVLGGELNAMFDCEREGKR 274
>gi|91975407|ref|YP_568066.1| ribonuclease BN [Rhodopseudomonas palustris BisB5]
gi|91681863|gb|ABE38165.1| ribonuclease BN [Rhodopseudomonas palustris BisB5]
Length = 297
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 2/276 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
V+ + DA F+ +DGWA+ASHI+LS+L+++FPF++ +LAGF G+
Sbjct: 2 RQIRYVYAVGMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSLAGFFGSKDLADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP +A ++ EI VL G TI + A YF+SNGVE+LR++LNRAY V
Sbjct: 62 AELLLDIWPAQVASTLSGEIHDVLTTTRGGALTIGLVLALYFASNGVESLRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GR 181
+E+R WY+ RL S GY L+A+ T + M+F+ V PL LA R + P L + R
Sbjct: 122 IEVRPWYLLRLESIGYTLVAAFTALAMAFLIVLGPLILATARHYVPLLVEDNQTLLTVAR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+ AL + L+ +H LPA + I PG+ FT ++ + + F Y+ F+ Y T
Sbjct: 182 YGITIGALILALVILHARLPAGHRTLKQIAPGIAFTIVASLASGMGFGFYLARFANNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
MYAGLAS++ LVFLY + F+ G ELNA++I
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSR 277
>gi|228476335|ref|ZP_04061036.1| transporter [Staphylococcus hominis SK119]
gi|228269618|gb|EEK11124.1| transporter [Staphylococcus hominis SK119]
Length = 402
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++FP ++F L + D+V
Sbjct: 66 NFLSYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDP--QQIKDLVSQN 123
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A +T + + + L ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 124 APAETADVVTKIFKDITSNSSGSLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDARNPI 183
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ ++ L I + ++ + I RI ++ +
Sbjct: 184 VLKLLSILFTIVMAIVLAIALTLPTFGNFIKDHLFGPLGLDQQVAWIFDLVRILLPLIVI 243
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + ++ P K+K S+ PG IFT I W++G+ F Y+ F YS Y LA I+
Sbjct: 244 IILFLTLYSVAPNVKTKFKSVYPGAIFTSIVWLLGSFAFGWYLSNFGNYSKTYGSLAGII 303
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+++Y+ I+GAE+NA + + K
Sbjct: 304 ILLLWIYITCFIIIIGAEINAIIHQRHVIK 333
>gi|237798880|ref|ZP_04587341.1| ribonuclease BN [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021734|gb|EGI01791.1| ribonuclease BN [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 323
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 1/264 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRFPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQVGMEEIIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L++ Y+ +LGAE+NA +
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIE 275
>gi|271961924|ref|YP_003336120.1| ribonuclease BN [Streptosporangium roseum DSM 43021]
gi|270505099|gb|ACZ83377.1| ribonuclease BN [Streptosporangium roseum DSM 43021]
Length = 334
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 109/271 (40%), Gaps = 4/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+D++ ++ F E++ A+ ++ A+LS+FP ++ ++ G G +++D +
Sbjct: 41 WDVLKRTVKEFQEDNLTDWAAALTYYAVLSIFPALLAVISVLGLFG-QSATQSLVDNLGA 99
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISAL--AAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I + + + A + +S+ V A + N Y + E R
Sbjct: 100 LAPGPARQTIDTVLQALQSSQRAAGIAAIIGIAVALWSASSYVGAFMRAANVMYEMPEGR 159
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ T + G + + + + S V K L + + +
Sbjct: 160 PVWKTLPLRLGITAVLVILMAVGSVAVVFTGGLAEQAGKVLGVGETGLAVWGVVKWPILV 219
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ P + I PG + + W+ + F Y+ F +YS YA L
Sbjct: 220 IIVALVLALLYWAAPNVQHPGFRWITPGSMIAVVLWIAASAAFGFYVANFGSYSKTYAAL 279
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A ++ L++L++ + +LG E +A +
Sbjct: 280 AGVVVFLIWLWITNIAVLLGVEFDAELARER 310
>gi|52079254|ref|YP_078045.1| RNase YfkH [Bacillus licheniformis ATCC 14580]
gi|52784619|ref|YP_090448.1| YfkH [Bacillus licheniformis ATCC 14580]
gi|319646964|ref|ZP_08001192.1| YfkH protein [Bacillus sp. BT1B_CT2]
gi|52002465|gb|AAU22407.1| Possible RNase YfkH [Bacillus licheniformis ATCC 14580]
gi|52347121|gb|AAU39755.1| YfkH [Bacillus licheniformis ATCC 14580]
gi|317391023|gb|EFV71822.1| YfkH protein [Bacillus sp. BT1B_CT2]
Length = 271
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 6/262 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + F +G + ++ ++ LLS+FPF++F L G+L VI ++
Sbjct: 3 FLKELGWRFFLHEGPSKSAELAYFFLLSLFPFMIFLLTLIGYLPVK--TGDVIGLIEQYA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE I + L +GL + +AA + +SNG+ A+ + N AY V E RS+ +
Sbjct: 61 PEDTMSVIEET----LNTGNRGLLSFGIIAALWSASNGLNAIVRAFNHAYEVEENRSFIM 116
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S T+++ + V ++ L R + L L
Sbjct: 117 VRLTSLLLTAAMVFTILVALLLPVFGRAIGHFIANLDGTPEMFLTAWSALRWGISPLVLL 176
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ F P + +LPG + W++ +VLF++Y+ F+ YS Y L I+
Sbjct: 177 IVFTALYFFAPNKRLSFKFVLPGAVAATAGWILVSVLFSYYVSEFANYSATYGSLGGIIV 236
Query: 251 CLVFLYMLGVFFILGAELNASM 272
+++ Y+ G+ ILG E+NA +
Sbjct: 237 LMIWFYLSGMMIILGGEINALL 258
>gi|172056670|ref|YP_001813130.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
gi|171989191|gb|ACB60113.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
Length = 302
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 3/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + + + + A ++ LS+FP I+F ++ F Q T+ +
Sbjct: 10 LALNLKQRMSDHNITDYAGTLAYYWFLSIFPGIIFVISVLSFFDIDQ--QTLESQIRDLA 67
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P TD I Q + P GL ++ A+ A + +S GV+ L + N AY R +
Sbjct: 68 PGGSVNTFTDVIFQAIKEPQGGLLSVGAILAIWSASKGVDRLITTANHAYGDFSPRGFVA 127
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIWNGRIYATMLAL 189
R I+ ++ + ++++ + V ++Y+ F P +++ R + + L
Sbjct: 128 ARGIALILTIVLGIGMLLLIVLNVLGGPIISYLANFVIPIDMGQKILLTVLRYAISTVLL 187
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L + P +PG +F I W + +V F Y+ FS Y+ Y L S++
Sbjct: 188 ILILSIFYRVAPKRPITFKEAIPGAVFGVIVWQLLSVGFGFYVSNFSNYNQTYGSLGSVV 247
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
L++LY G+ +LG+ELNAS + + P
Sbjct: 248 IVLLWLYFTGLIILLGSELNASWERFMKKADP 279
>gi|302187707|ref|ZP_07264380.1| ribonuclease BN [Pseudomonas syringae pv. syringae 642]
Length = 321
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + + ++ +W R A ++
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIIIL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|298293398|ref|YP_003695337.1| ribonuclease BN [Starkeya novella DSM 506]
gi|296929909|gb|ADH90718.1| ribonuclease BN [Starkeya novella DSM 506]
Length = 277
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 1/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FDI +DA FVE+DGWA++SHI+LSAL+S+FPF++F LA F + ++
Sbjct: 5 FDIAWDAFWRFVEDDGWAISSHIALSALMSLFPFLIFVTALAAFFDLKTLADETVQLMLE 64
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
AWP +A PI EI VL + TI + A YFSSNG+E+LRI LNRAY V E R+W
Sbjct: 65 AWPAQVAAPIGREIRNVLTQVRTDVLTIGVVLAIYFSSNGIESLRIGLNRAYGVRESRAW 124
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
Y RL S GYV++ + L+ +SF+ V P+ ++ PAL +I R AT
Sbjct: 125 YWLRLESIGYVVVGAAGLLALSFLVVLGPVLWLAAVRWVPALQPFGWVITFLRYAATSAI 184
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLAS 247
L + L+ H++LPA + + + PG++ T W+ F Y+ F+ Y T YAGLAS
Sbjct: 185 LIVALVVAHVWLPAGRRTLAEVAPGILVTLGLWLAAGAAFGRYLAEFANNYVTTYAGLAS 244
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+M LVFLY F+ G ELNA++ +
Sbjct: 245 VMIALVFLYTTASIFVYGGELNAAIRRAREGR 276
>gi|261418745|ref|YP_003252427.1| ribonuclease BN [Geobacillus sp. Y412MC61]
gi|319765561|ref|YP_004131062.1| ribonuclease BN [Geobacillus sp. Y412MC52]
gi|261375202|gb|ACX77945.1| ribonuclease BN [Geobacillus sp. Y412MC61]
gi|317110427|gb|ADU92919.1| ribonuclease BN [Geobacillus sp. Y412MC52]
Length = 277
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/270 (23%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I + + F E++ +++ ++ LLS+FPF++F L +L V+ +V
Sbjct: 7 FIRELVRRFTEDEIPRLSAELAYYFLLSLFPFLLFLMTLLAYLPIPH--EDVLALVRQYA 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + +++ GL + S +AA + +SNG+ A+ + NRAY V E R ++I
Sbjct: 65 PKEALHLIETNVYRLMNEQNGGLLSFSIIAAIWSASNGMSAIMRAFNRAYDVQEDRPFWI 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S L + +++ + V + ++ L + R + L LF
Sbjct: 125 VRGLSIVLTLGMIMVIIVALVLPVFGRIIGLFLFSALGLSQQFLEVWNAFRWVTSSLLLF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L ++
Sbjct: 185 AVFTALYYFAPNKQLRCVNVVRGALFATAGWIAASLAFAYYVNNFADYTAMYGSLGGMIV 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+V+ Y+ G+ +LG ELNA K+
Sbjct: 245 LMVWFYLSGMILVLGGELNAMFDCEREGKR 274
>gi|150391950|ref|YP_001321999.1| putative ribonuclease BN [Alkaliphilus metalliredigens QYMF]
gi|149951812|gb|ABR50340.1| putative ribonuclease BN [Alkaliphilus metalliredigens QYMF]
Length = 276
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 125/276 (45%), Gaps = 2/276 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + +++ F +++ A+ + IS +LS FPF++F L G++ + +
Sbjct: 3 FRRIKEVLLHLYNQFDKDEVPALGAQISYYLILSFFPFLIFLIVLIGYIPLTE--ERTLY 60
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P + + IL++ L + L + +S G A+ +N+AY V E
Sbjct: 61 ELALILPHDAYSLVEEIILEITTADNTTLISFGMLGTLWTASRGTSAMIRGMNKAYNVKE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ + + + + ++ + V L + L R
Sbjct: 121 DRPFWKVAGMGVIFTIGLAFMILFSLTLLVFGQLLGEMLINQLNLSTLLEPTWRLVRYGV 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+LALF ++LF P K+ +I G +F+ + WVV ++ F +Y+ F Y+ +Y
Sbjct: 181 ALLALFSTFTLLYLFGPNYHLKLKNIYWGALFSTVGWVVISLGFAYYVNNFGNYTRVYGS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +M L++LY+ + ++GAE+N+++ ++ R K
Sbjct: 241 IGGVMILLIWLYLSSLIVLMGAEVNSTIWVFSKRGK 276
>gi|170780894|ref|YP_001709226.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
gi|169155462|emb|CAQ00570.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
Length = 363
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/268 (20%), Positives = 118/268 (44%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ + F + +A+ ++ A+LS+FP ++ +L G G V V+D++ G
Sbjct: 36 VLRKTMREFGTDQCTDIAASLTYYAVLSLFPALIAIISLLGVFGQGESTVSAVLDLLRGF 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I + + PA G + + A + +S V A ++NR Y + E R +
Sbjct: 96 APADALALIEPILTGFVESPAAGFALVSGIVLAIWSASGYVGAFSRAMNRIYEIPEGRPF 155
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + ++ V L++ + + + + LG + I+W+ +
Sbjct: 156 WKLKPTQLAVTVIGIVLLLVCALIIAISGPVTDAIGEAL-GLGQTVQIVWSIAKWPVLAF 214
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A+ + + ++ P AK K + G + V+ +V F Y+ FS+Y+ Y LA
Sbjct: 215 AIVLLIAILYYATPNAKQPKFRWMSMGAAIALVVLVIASVAFAFYVTEFSSYAKSYGALA 274
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L++ + + GAE +A +
Sbjct: 275 GVVVFLLWLWIANLALLFGAEFDAELER 302
>gi|168181945|ref|ZP_02616609.1| YihY family protein [Clostridium botulinum Bf]
gi|237796863|ref|YP_002864415.1| YihY family protein [Clostridium botulinum Ba4 str. 657]
gi|182674758|gb|EDT86719.1| YihY family protein [Clostridium botulinum Bf]
gi|229263986|gb|ACQ55019.1| YihY family protein [Clostridium botulinum Ba4 str. 657]
Length = 285
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 124/265 (46%), Gaps = 2/265 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F+E++ A++S ++ + ++SVFPF++F L G+L H ++ + P
Sbjct: 16 LANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--EDLLLGLKEIMPSNT 73
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ +++
Sbjct: 74 YLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQIM 133
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L + LV+ F+ V + I R + L
Sbjct: 134 TIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIRYIIMIGVTIFILA 193
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++ LV+
Sbjct: 194 ALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVIVFLVW 253
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
LY+ + I G E+NA ++ +
Sbjct: 254 LYLTSIIVITGGEINALLVSNREKD 278
>gi|257486817|ref|ZP_05640858.1| ribonuclease BN, putative [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289625973|ref|ZP_06458927.1| ribonuclease BN, putative [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647974|ref|ZP_06479317.1| ribonuclease BN, putative [Pseudomonas syringae pv. aesculi str.
2250]
gi|298488187|ref|ZP_07006224.1| Ribonuclease BN [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298157466|gb|EFH98549.1| Ribonuclease BN [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330869370|gb|EGH04079.1| ribonuclease BN [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330988666|gb|EGH86769.1| ribonuclease BN [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 322
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + + ++ +W R A ++
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIIIL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|330949876|gb|EGH50136.1| ribonuclease BN [Pseudomonas syringae Cit 7]
Length = 322
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + + ++ +W R A ++
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIIIL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|92118944|ref|YP_578673.1| ribonuclease BN [Nitrobacter hamburgensis X14]
gi|91801838|gb|ABE64213.1| ribonuclease BN [Nitrobacter hamburgensis X14]
Length = 297
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 111/279 (39%), Positives = 174/279 (62%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ V+ + DA F+ +DGWA+ASHI+LSAL+++FPF++ +LAGFLG+
Sbjct: 2 RHIRYVYRVGTDAFYTFLADDGWAIASHIALSALMALFPFLIVLTSLAGFLGSKGLADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP+ +A ++ EI VL + T+ A+ A YF+SNGVE+LR++LNRAY V
Sbjct: 62 AELMIQIWPDQVANALSGEIHDVLTTTRRDALTVGAVLAVYFASNGVESLRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-R 181
+E R WY RL S GY L+A+VT + M+F+ V PL +A +++ P + + N R
Sbjct: 122 IEPRRWYWLRLESIGYTLVAAVTALAMAFLIVLGPLIIAAAKRYIPLIVESNESLLNIAR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T++A+FI L+ +H +LPA + + I+PG+IFT ++ + + F Y+ F+ Y T
Sbjct: 182 YGITVIAMFIALVILHAWLPAGRRSFLQIIPGIIFTMLASLASGIGFGLYLARFANNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNA++I +
Sbjct: 242 MYAGLASVVIALVFLYFIAAIFVFGGELNAAIIKSRLPR 280
>gi|71737082|ref|YP_273727.1| ribonuclease BN [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71557635|gb|AAZ36846.1| ribonuclease BN, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320325401|gb|EFW81466.1| ribonuclease BN, putative [Pseudomonas syringae pv. glycinea str.
B076]
Length = 322
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + + ++ +W R A ++
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIIIL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|49476272|ref|YP_034313.1| ribonuclease RNAse BN transmembrane protein [Bartonella henselae
str. Houston-1]
gi|49239080|emb|CAF28383.1| Ribonuclease RNAse bn transmembrane protein [Bartonella henselae
str. Houston-1]
Length = 284
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 109/276 (39%), Positives = 175/276 (63%), Gaps = 1/276 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F + I+ DA+ H+ ++G A ASH++LS LL++FPF +FGA+LA F+GA + P
Sbjct: 2 LKRIFWYSYRILVDAVSHYWRDNGSAFASHVALSGLLALFPFFIFGASLASFIGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ +I+ VL + +G+ T+S + AAYF+SNGVEALR +LN+AY
Sbjct: 62 QKIKALLQLLPDVIAEPLSQDIVNVLTIQRRGVLTVSVIGAAYFASNGVEALRTALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS R S +V+L + LV++SF+ + PL + ++ + + +I
Sbjct: 122 RVVDRRSLLFCRFQSLFFVILGAFGLVVISFLLILAPLIIKIMQDHSFFITEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LF+ L+ VH +LPA + K + +LPG++ T W + ++ F Y+ F Y +
Sbjct: 182 RYIIAAVVLFVSLLIVHKWLPAERRKFIDVLPGIVVTMSVWFMASLAFAQYLTMFD-YIS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
YAGLASIM ++FLY+L FILG E+NA+++ Y
Sbjct: 241 TYAGLASIMVAIIFLYILSAIFILGGEINAAIMFYR 276
>gi|66047009|ref|YP_236850.1| ribonuclease BN [Pseudomonas syringae pv. syringae B728a]
gi|63257716|gb|AAY38812.1| Ribonuclease BN [Pseudomonas syringae pv. syringae B728a]
Length = 321
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + + ++ +W R A ++
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIIIL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|138894066|ref|YP_001124519.1| ribonuclease BN [Geobacillus thermodenitrificans NG80-2]
gi|134265579|gb|ABO65774.1| Ribonuclease BN [Geobacillus thermodenitrificans NG80-2]
Length = 273
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + F E++ +++ ++ LLS+FPF++F L +L V+ +V
Sbjct: 3 FVRELARRFTEDEIPRLSAELAYYFLLSLFPFLLFLMTLLAYLPIPH--EDVLALVRQYA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + ++ V L ++S + A + +SNG+ A+ + NRAY V E R +++
Sbjct: 61 PKEALHLIETNVHHLMDVQNGKLLSLSIIGAVWSASNGMRAIMRAFNRAYDVEENRPFWV 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S L +++ + V ++ L + R + L LF
Sbjct: 121 ARGLSVALTLGMIAVIIVALVLPVFGRTIGLFLFSALGLSEQFLTVWNAFRWTTSSLLLF 180
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L ++
Sbjct: 181 AVFTALYYFAPNKQLRCVNVVRGALFATAGWIATSLAFAYYVNHFANYTAMYGSLGGLIV 240
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++LY+ G+ +LG E+NA +K
Sbjct: 241 LMIWLYLSGMILVLGGEMNAIFDCEREGRK 270
>gi|120434656|ref|YP_860345.1| ribonuclease BN [Gramella forsetii KT0803]
gi|117576806|emb|CAL65275.1| ribonuclease BN [Gramella forsetii KT0803]
Length = 338
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/268 (20%), Positives = 113/268 (42%), Gaps = 8/268 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + + +++ ++ LS+FP IV ++ + + + +
Sbjct: 42 DIGKRVYKEMNVDHVQIVSAGVAFYFFLSIFPTIVVAISIYSLVLDPIQIQEQLSRLTLI 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE ITD + V+ K + +S L + + ++ G AL +N AY + R
Sbjct: 102 LPEQAYGMITDILNPVINQDRKEIGWGLLVSILVSIWSANKGTSALFQGVNIAYDETDNR 161
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
L++ + L V +I + + PL + + P L ++L + R
Sbjct: 162 GLIKKNLLTLLFTLAGVVIGLISLLIVIFFPLLVKNIG-LTPGLEDMLTWL---RWVFLG 217
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L L V+ P + K + G I I W+ G++ F+ Y+ F +Y +Y
Sbjct: 218 IILISTLSMVYKIAPNRSRPKFRWVSWGAILGTIFWLAGSMGFSWYVGNFGSYDDLYGSF 277
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
A++ +++L++ ++GAE+N+ M
Sbjct: 278 AAVAILMLWLFLTAFIVLMGAEINSEME 305
>gi|330971090|gb|EGH71156.1| ribonuclease BN [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 321
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + + L+ + V P + ++ + + ++ +W R A ++
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIIIL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 191 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++ Y+ +LGAE+NA +
Sbjct: 251 IVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|257893552|ref|ZP_05673205.1| ribonuclease BN [Enterococcus faecium 1,231,408]
gi|314940015|ref|ZP_07847208.1| YihY family protein [Enterococcus faecium TX0133a04]
gi|314941893|ref|ZP_07848757.1| YihY family protein [Enterococcus faecium TX0133C]
gi|314952420|ref|ZP_07855426.1| YihY family protein [Enterococcus faecium TX0133A]
gi|314993211|ref|ZP_07858591.1| YihY family protein [Enterococcus faecium TX0133B]
gi|314997801|ref|ZP_07862713.1| YihY family protein [Enterococcus faecium TX0133a01]
gi|257829931|gb|EEV56538.1| ribonuclease BN [Enterococcus faecium 1,231,408]
gi|313588173|gb|EFR67018.1| YihY family protein [Enterococcus faecium TX0133a01]
gi|313592292|gb|EFR71137.1| YihY family protein [Enterococcus faecium TX0133B]
gi|313595463|gb|EFR74308.1| YihY family protein [Enterococcus faecium TX0133A]
gi|313599318|gb|EFR78163.1| YihY family protein [Enterococcus faecium TX0133C]
gi|313640748|gb|EFS05328.1| YihY family protein [Enterococcus faecium TX0133a04]
Length = 326
Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I + + + + ++ LLS+FP I+ N+ FL Q TV+ +
Sbjct: 13 LMRFIETTQKRITDSEMSTTSVVVAYYLLLSLFPLIIAFGNILPFLHIDQ--ETVLTYLR 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE + + I I +L + GL ++SALAA + +S + AL+I++N+AY V ++
Sbjct: 71 EVIPETVYQFIGPAIKDLLTQSSGGLLSVSALAALWSASQSINALQIAMNKAYGVENRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I R S ++L + + ++ V L L ++ N + + T++
Sbjct: 131 FLIVRFFSLIVIVLFMIAISGVTIVLGLGQLILDAIQPIVQIPVNFIDQFQTLKWPITLV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALF+ + ++L +P A+ K+ +I+PG IF + W++ + +F+ Y F+T + Y + S
Sbjct: 191 ALFVIMFLIYLIVPNAQLKLKTIIPGTIFATVGWMLLSQVFSIYARYFATRISGYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L ILG +NA + Y
Sbjct: 251 FIVLMLWLNFAATIIILGGIINAVVQEY 278
>gi|90418256|ref|ZP_01226168.1| putative Ribonuclease BN, possibly membrane-associated
[Aurantimonas manganoxydans SI85-9A1]
gi|90337928|gb|EAS51579.1| putative Ribonuclease BN, possibly membrane-associated
[Aurantimonas manganoxydans SI85-9A1]
Length = 420
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 124/274 (45%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + + ++ +A+ ++ LL+ P + ++ G V ++
Sbjct: 78 DVAWRVLAEISDDRVMLVAAGVTYYLLLAFVPALSALVSVYGLFADPATVQEHAAMLQAL 137
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I +++ ++ + L F IS A + ++ G++AL ++N AY E R
Sbjct: 138 IPGGGMEIINEQLTRLASQGDTTLGFTFAISLAIALWSANAGMKALFEAMNVAYDEAEKR 197
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L SF + L A V ++ + +A+PLAL + + ++
Sbjct: 198 SFVTLTLTSFVFTLGAIVAAILFIGLVIALPLALDLLG----IGTDTKWLVSIASYAGIF 253
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + G+ ++ + P+ ++K I PG + T + VV ++LF+ Y+ F +Y+ Y L
Sbjct: 254 LLVSFGIAALYHWGPSRTRAKWRWITPGTVLTVVVIVVVSMLFSWYVANFGSYNATYGSL 313
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ + ++++ I+G E+NA M R
Sbjct: 314 GALIGFMTWIWISTTILIVGGEVNAEMEHQTARD 347
>gi|319899464|ref|YP_004159561.1| ribonuclease RNAse bn transmembrane protein [Bartonella
clarridgeiae 73]
gi|319403432|emb|CBI77000.1| ribonuclease RNAse bn transmembrane protein [Bartonella
clarridgeiae 73]
Length = 284
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 108/280 (38%), Positives = 175/280 (62%), Gaps = 1/280 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ F + I +A+ H++ ++G A ASH++LS LL+ FPF +FG +LA FLGA ++ P
Sbjct: 2 IKKAFWYSYRIFVNAVSHYLRDNGNAFASHVALSGLLAFFPFFIFGTSLASFLGAFKYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I+ + P+ IA+P++ EI+ VL L T+S + AAYF+SNGV ALRI+LN+AY
Sbjct: 62 QKIEALVQLLPDAIAEPLSKEIITVLTTQRGDLLTLSVIGAAYFASNGVGALRIALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV++ RS + R S +V++ +V LV +SF+ V PL + ++ + + + II
Sbjct: 122 RVIDRRSLFFCRFQSLFFVIIGTVGLVAISFLLVLAPLLIKIMQNYSSHITEYIGIIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ L L+ VH +LPA + K++ ILPG++ T W + ++ F Y+ F Y++
Sbjct: 182 RYIIAIVVLLTSLLIVHKWLPAGQRKLIDILPGILVTIFVWFLTSIAFAQYLTMF-NYTS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGL SIM ++FLY+L FILG E+NA+++ Y +
Sbjct: 241 TYAGLTSIMVAIIFLYILSAIFILGGEINAAIMFYRDHSQ 280
>gi|153939153|ref|YP_001392760.1| YihY family protein [Clostridium botulinum F str. Langeland]
gi|152935049|gb|ABS40547.1| YihY family protein [Clostridium botulinum F str. Langeland]
gi|295320739|gb|ADG01117.1| YihY family protein [Clostridium botulinum F str. 230613]
Length = 285
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 124/265 (46%), Gaps = 2/265 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F+E++ A++S ++ + ++SVFPF++F L G+L H ++ + P
Sbjct: 16 LANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--EDLLLGLKEIMPSNT 73
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ +++
Sbjct: 74 YLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQIM 133
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L + LV+ F+ V + I R + L
Sbjct: 134 TIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIRYIIMIGVTIFILA 193
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++ LV+
Sbjct: 194 ALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVIVFLVW 253
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
LY+ + I G E+NA ++ +
Sbjct: 254 LYLTSIIVITGGEINALLVSSREKD 278
>gi|170760762|ref|YP_001788733.1| YihY family protein [Clostridium botulinum A3 str. Loch Maree]
gi|169407751|gb|ACA56162.1| YihY family protein [Clostridium botulinum A3 str. Loch Maree]
Length = 285
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 125/265 (47%), Gaps = 2/265 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F+E++ A++S ++ + ++SVFPF++F L G+L H ++ + P
Sbjct: 16 LANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--EDLLLGLKEIMPSNT 73
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ +++
Sbjct: 74 YLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQIM 133
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L + LV+ F+ V + I R + L
Sbjct: 134 TIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIRYIIMIGVTIFILA 193
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P+ + + +LPG IF+ I+W++ ++ F+ Y+ F+ YS +Y + +++ LV+
Sbjct: 194 ALYYYTPSKRLRWRDVLPGAIFSTIAWIIASMGFSFYVDNFNNYSRLYGSIGAVIVFLVW 253
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
LY+ + I G E+NA ++ +
Sbjct: 254 LYLTSIIVITGGEINALLVSSREKD 278
>gi|311032903|ref|ZP_07710993.1| putative Ribonuclease BN [Bacillus sp. m3-13]
Length = 286
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 113/261 (43%), Gaps = 2/261 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ ++ +A+ + +LS+FP +V ++ +L VI+ +
Sbjct: 6 KFLKRLGLEMKKDRATGLAAEQAYYYMLSLFPLLVLALSIIPYLNIDP--QKVIEFLQTM 63
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I + + P GL T L + +SNG+ A ++N A+ V E R +Y
Sbjct: 64 MPPETIAVFEENINEFVNKPNGGLLTFGILGTIWSASNGMNAFISAMNEAFNVEESRPFY 123
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ RL+S G + +I F+ V + + + G+ +I+ R +
Sbjct: 124 LVRLLSIGLTIGLIFAFLIAFFLPVFGGIIIKQLESVIYIPGSTAIILNILRFIIAFFVI 183
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + ++ P +LPG I + W + ++ F+ Y+ F YS Y L ++
Sbjct: 184 FTIIAVLYRIAPDISKSFKQLLPGAIVATVIWQLVSLGFSFYVSNFGNYSATYGSLGGVI 243
Query: 250 TCLVFLYMLGVFFILGAELNA 270
+++L++ G+ ++G E+NA
Sbjct: 244 ILMLWLFLTGLALVIGGEINA 264
>gi|319406347|emb|CBI79984.1| ribonuclease RNAse bn transmembrane protein [Bartonella sp. AR
15-3]
Length = 286
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 107/280 (38%), Positives = 174/280 (62%), Gaps = 1/280 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + I +A+ H++ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P
Sbjct: 2 IKRALWYSYHIFCNAVSHYLRDNGNAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I+ + P+ IA+P++ EI+ VL L T+S + AAYF+SNGV ALR +LN+AY
Sbjct: 62 QKIEALVQLLPDAIAEPLSKEIITVLTTQRGDLLTLSVIGAAYFASNGVSALRAALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV++ RS + R S +V++ ++ LV++SF+ V PL + ++ + + + +I
Sbjct: 122 RVIDRRSLFFCRFQSLFFVIIGTIGLVVISFLLVLAPLLIKIMQNYPCHITEYISMIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ LF L+ VH +LPA + K++ ILPG++ T W + ++ F Y++ F Y++
Sbjct: 182 RYVIAIIVLFTSLLIVHKWLPAGQRKVIDILPGILVTIFVWFLTSIAFAQYLIMF-NYTS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGL SIM ++FLY+L FILG E+NA++I Y K
Sbjct: 241 TYAGLTSIMIAIIFLYILSAIFILGGEINAAIIFYRDHSK 280
>gi|148271712|ref|YP_001221273.1| putative tRNA processing ribonuclease BN [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829642|emb|CAN00558.1| putative tRNA processing ribonuclease BN [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 363
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 119/268 (44%), Gaps = 5/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ + F + +A+ ++ A+LS+FP ++ +L G G Q V V+D++ G
Sbjct: 36 VLRKTVREFGSDQCTDIAASLTYYAVLSLFPALIAIISLLGVFGQGQQTVTAVLDLLRGF 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I + + PA G + + A + +S V A ++NR Y + E R +
Sbjct: 96 APADALALIEPILTGFVESPAAGFALVSGIVLAIWSASGYVGAFTRAMNRIYEIPEGRPF 155
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + L+ V L++ + + + + LG + I+W+ +
Sbjct: 156 LKLKPMQLAVTLIGIVILLVCALIIAISGPVTDAIGEAL-GLGPTVQIVWSIAKWPVLAF 214
Query: 188 ALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A+ + + ++ P AK K + G + VV +V F Y+ FS+Y+ Y LA
Sbjct: 215 AIVLLIAILYYATPNAKQPKFRWMSVGAAIALVVLVVASVGFAFYVTEFSSYAKSYGALA 274
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L++ + + GAE +A +
Sbjct: 275 GVVVFLLWLWIANLALLFGAEFDAELER 302
>gi|196250266|ref|ZP_03148959.1| ribonuclease BN [Geobacillus sp. G11MC16]
gi|196210155|gb|EDY04921.1| ribonuclease BN [Geobacillus sp. G11MC16]
Length = 277
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + F E++ +++ ++ LLS+FPF++F L +L V+ +V
Sbjct: 7 FVRELARRFTEDEIPRLSAELAYYFLLSLFPFLLFLMTLLAYLPIPH--EDVLALVRQYA 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + ++ V L ++S + A + +SNG+ A+ + NRAY V E R +++
Sbjct: 65 PKEALHLIETNVHHLMDVQNGKLLSLSIIGAVWSASNGMRAIMRAFNRAYDVEENRPFWV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S L +++ + V ++ L + R + L LF
Sbjct: 125 ARGLSVALTLGMIAVIIVALVLPVFGRTIGLFLFSALGLSEQFLTVWNAFRWTTSSLLLF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L ++
Sbjct: 185 AVFTALYYFAPNKQLRCVNVVRGALFATAGWIATSLAFAYYVNHFANYTAMYGSLGGLIV 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++LY+ G+ +LG E+NA +K
Sbjct: 245 LMIWLYLSGMILVLGGEMNAIFDCEREGRK 274
>gi|170742693|ref|YP_001771348.1| ribonuclease BN [Methylobacterium sp. 4-46]
gi|168196967|gb|ACA18914.1| ribonuclease BN [Methylobacterium sp. 4-46]
Length = 293
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 102/277 (36%), Positives = 151/277 (54%), Gaps = 1/277 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+I A + FV DGWA+ASHI+LS L S+FPF++ LA G
Sbjct: 2 RLRTALEIAAIAAQRFVAHDGWAIASHIALSLLTSLFPFLILLTALASVFGTKSLADEAS 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+++F WP +A P+ E+ +VL G+ TI AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 62 NLLFEVWPSEVAGPVAAEVHRVLTEQRGGILTIGALLALYFSSSGVESLRVGLNRAYGLR 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R W++TRL S GYV+ + ++ +F+ V PL + P + L L I R+
Sbjct: 122 ESRPWWLTRLESIGYVICGAFAMLAFTFLVVLGPLVWRALVMVAPGIEPLGLTIAVVRVA 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMY 242
T L + + L+ H F+ A + +LPGV T WV+ + F Y+ FS+ Y + Y
Sbjct: 182 LTALLIALVLVIAHKFIAAGRRPWHMVLPGVAVTLGMWVIAGLGFGTYLDRFSSAYVSTY 241
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
GLA+ M L+F+Y L F+ G E+N ++I R+
Sbjct: 242 GGLATAMVFLIFVYWLAAMFLFGGEVNGTLIAARRRR 278
>gi|85714895|ref|ZP_01045881.1| ribonuclease BN [Nitrobacter sp. Nb-311A]
gi|85698381|gb|EAQ36252.1| ribonuclease BN [Nitrobacter sp. Nb-311A]
Length = 286
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 108/269 (40%), Positives = 165/269 (61%), Gaps = 2/269 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGF G+ + ++ WPE
Sbjct: 1 MDAFYTFLADDGWAIASHIALSVLMALFPFLIVLTSLAGFFGSKELADQAAQLMLQIWPE 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+A ++ EI VL TI + A YF+SNGVE+LR++LNRAY V+E R WY R
Sbjct: 61 QVANTLSSEIHDVLTTSRGDALTIGLVLAVYFASNGVESLRVALNRAYAVIESRRWYWLR 120
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFI 191
L S GY L+A+VT + M+F+ V PL +A ++ P + + N R T+LA+F+
Sbjct: 121 LESIGYTLVAAVTALAMAFLIVLGPLIIAAAKRHIPLIVESNESLLNIARYGITILAMFV 180
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLASIMT 250
L+ +H +LPA + I+PG++FT ++ ++ + F Y+ F+ Y TMYAGLAS++
Sbjct: 181 ALLILHAWLPAGRRSFRQIIPGIVFTMLASLMSGIGFGLYLARFANNYVTMYAGLASVVI 240
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
LVFLY + F+ G ELNA++I +
Sbjct: 241 ALVFLYFIAAIFVFGGELNAAIIKSRLPR 269
>gi|86747942|ref|YP_484438.1| ribonuclease BN [Rhodopseudomonas palustris HaA2]
gi|86570970|gb|ABD05527.1| Ribonuclease BN [Rhodopseudomonas palustris HaA2]
Length = 297
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 109/274 (39%), Positives = 161/274 (58%), Gaps = 2/274 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
V+ + DA F+ +DGWA+ASHI+LS+L+++FPF++ ++AGF G+ +
Sbjct: 4 IRYVYAVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSVAGFFGSKDLADQAAE 63
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ WP +A ++ EI VL TI L A YF+SNGVE+LR++LNRAY V+E
Sbjct: 64 LMLQIWPAQVASTLSGEIHDVLTTTRGDALTIGLLLALYFASNGVESLRVALNRAYAVIE 123
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIY 183
MR WY+ RL S GY L+A+ T + M+F+ V PL LA R + P + + R
Sbjct: 124 MRPWYMLRLESIGYTLVAAFTALAMAFLIVLGPLILATARHYVPLMVEDNQTLLTVARYG 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMY 242
T+ AL + L +H LPA + I+PG+ FT ++ + V F Y+ F+ Y TMY
Sbjct: 184 ITVGALILALFILHARLPAGHRTVKQIVPGIAFTVVASLASGVGFGLYLARFANNYVTMY 243
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
AGLAS++ LVFLY + F+ G ELNA++I
Sbjct: 244 AGLASVIIALVFLYFIAAIFVYGGELNAAIIKSR 277
>gi|21219215|ref|NP_624994.1| hypothetical protein SCO0686 [Streptomyces coelicolor A3(2)]
gi|6425606|emb|CAB60467.1| putative membrane protein [Streptomyces coelicolor A3(2)]
Length = 407
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F +++ A+ ++ +L++FP ++ +L G + V+D V
Sbjct: 106 LLRRVFAEFKDDELTDRAAALTYYGILALFPALLVLVSLLG-IAGDSATQEVLDNVKKLA 164
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +T+ + Q+ A G L + + A + +S V A S N Y V E R
Sbjct: 165 PGSARDVLTNAVEQLQAKAGLGSVLAVVGLVGAVWSASGYVAAFIRSANAVYDVPEGRPV 224
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + ++ V V+ + + V +G+ L +W+ + +L
Sbjct: 225 WKVLPLRVALTVVLLVLAVVSALIVVFTGSLARQAGTAL-GVGDTALTVWSIAKWPVLVL 283
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ P A+ K I PG + + W++ + F Y+ F +Y+ Y LA
Sbjct: 284 LVTFMIAILYWAAPNARVKGFKWISPGSLVALLIWLLASAGFAFYVANFGSYNKTYGTLA 343
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 344 GVIIFLVWLWVTNLAILLGLEFDAELARQR 373
>gi|27376485|ref|NP_768014.1| hypothetical protein bll1374 [Bradyrhizobium japonicum USDA 110]
gi|27349625|dbj|BAC46639.1| bll1374 [Bradyrhizobium japonicum USDA 110]
Length = 297
Score = 201 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 110/276 (39%), Positives = 168/276 (60%), Gaps = 2/276 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ ++ DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGF G+ +
Sbjct: 2 KAIRYIYVVVMDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFFGSKELADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ WP+ +A ++ EI VL G+ TI A + YF+SNGVEALR++LNRAY V
Sbjct: 62 ASLMLEVWPKQVADSLSGEIHDVLTTTRTGVLTIGAALSVYFASNGVEALRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-R 181
VEMR WY RL S GY L+A+ T + M+F+ V PL + R+ P I R
Sbjct: 122 VEMRRWYWLRLESIGYTLVAAFTALAMAFLIVLGPLIIEATRRHIPLFVESNESILTWLR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+ AL + LI +H ++PA + + ILPG++FT ++ ++ ++F Y+ F+ Y T
Sbjct: 182 YGITIGALVVALIILHAWVPAGRRSFLQILPGIVFTMVASLISGIVFGQYLARFANNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
MYAGLAS++ LVFLY + F+ G ELNA++I
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSR 277
>gi|209544202|ref|YP_002276431.1| ribonuclease BN [Gluconacetobacter diazotrophicus PAl 5]
gi|209531879|gb|ACI51816.1| ribonuclease BN [Gluconacetobacter diazotrophicus PAl 5]
Length = 321
Score = 201 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 7/271 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + + A+ + A LS+FP I ++ G + V +DV+
Sbjct: 32 VLGRMARNLSSDQITLAAAGCAFYATLSLFPAISTLISIYGLMFDPDTVEPQMDVLRHLL 91
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + I ++A P L +S + +S ++ ++N AY E R
Sbjct: 92 PPSAFTLIDERIHTLVAEPHSSLTLNLILSTTITLWSASAATRSIISAVNIAYDTRETRG 151
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF---PALGNLLLIIWNGRIYA 184
+ L++ G L A V+ V VA+P+ + +V P ++ L++ G
Sbjct: 152 FVQFHLMALGMTLCAICGAVLTLSVLVALPVLIDFVPARLGLAPPPWSVELLVQTGGPAL 211
Query: 185 TMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + ++ F P + + ILPG + W+V ++ F++Y+ T ++Y+ Y
Sbjct: 212 MLLFVLAACSLLYRFSPNRRIVHWICILPGSCTATLIWIVSSIGFSYYVSTIASYNATYG 271
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
L +++ +++ ++ +LGAELNA +
Sbjct: 272 PLGAVVATMMWFFVTAYVILLGAELNAGLEA 302
>gi|297563154|ref|YP_003682128.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296847602|gb|ADH69622.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 330
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 5/269 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + + F E+ +A+ ++ A+LS+FP ++ +L G G T+ D +
Sbjct: 31 WASLRRTVGEFKEDALADLAAGLTYYAILSLFPALLVLVSLLGLAG-PSATQTLTDNISA 89
Query: 69 AWPEVIAKPITDEILQVLAVP-AKGLFTISALA-AAYFSSNGVEALRISLNRAYRVVEMR 126
P A+ +T I + A G+F + +LA A + +S + A + N Y V E R
Sbjct: 90 TMPADAARLVTTAIENLQGNQTAAGVFGLVSLAIALWSASGYIAAFMRASNVVYDVPEGR 149
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYAT 185
+ T I G LL V L + A A+V + LG+ ++ +WN +
Sbjct: 150 PIWKTLPIRVGVTLLMVVLLSLTVVGVALTGSAAAWVGQLL-GLGSTVVTVWNIAKWPVL 208
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + + ++ P A+ + PG + + W++ + F Y+ F++Y Y +
Sbjct: 209 LLIVVFMIALLYWASPNARRGFRWVSPGSVLAVVLWLLASAAFAFYVANFASYGRTYGTM 268
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A+++ LV+L++ + +LG E NA +
Sbjct: 269 ATVVVFLVWLWITNIAILLGEEFNAEIER 297
>gi|162147146|ref|YP_001601607.1| ribonuclease protein [Gluconacetobacter diazotrophicus PAl 5]
gi|161785723|emb|CAP55294.1| putative ribonuclease protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 321
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 122/281 (43%), Gaps = 8/281 (2%)
Query: 2 REYFCIVFD-IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
R ++ ++ + + A+ + A LS+FP I ++ G + V
Sbjct: 22 RSMLRQMWKPVLGRMARNLSSDQITLAAAGCAFYATLSLFPAISTLISIYGLMFDPDTVE 81
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLN 117
+DV+ P I + I ++A P L +S + +S ++ ++N
Sbjct: 82 PQMDVLRHLLPPSAFTLIDERIHTLVAEPHSSLTLNLILSTTITLWSASAATRSIISAVN 141
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF---PALGNLL 174
AY E R + L++ G L A V+ V VA+P+ + +V P ++
Sbjct: 142 IAYDTRETRGFVQFHLMALGMTLCAICGAVLTLSVLVALPVLIDFVPARLGLAPPPWSVE 201
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
L++ G +L + ++ F P + + ILPG + W+V ++ F++Y+
Sbjct: 202 LLVQTGGPALMLLFVLAACSLLYRFSPNRRIVHWICILPGSCTATLIWIVSSIGFSYYVS 261
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T ++Y+ Y L +++ +++ ++ +LGAELNA +
Sbjct: 262 TIASYNATYGPLGAVVATMMWFFVTAYVILLGAELNAGLEA 302
>gi|146277245|ref|YP_001167404.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
gi|145555486|gb|ABP70099.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
Length = 322
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 59/274 (21%), Positives = 123/274 (44%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI E+ +A+ ++ LL++FP + +L G + ++ + G
Sbjct: 28 DIALRVWRSIDEDRVMLVAAGVTFYLLLALFPTLAAFVSLYGLFADPAVIADQVESLRGV 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +T ++ + + L F IS L A + +++G++AL ++N A+ E R
Sbjct: 88 LPAEGIELVTAQLRTLAGGQSASLTVGFAISFLIAFWSANSGMKALIEAMNIAHDEREKR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+SF L A +S + + + V F +++W R +
Sbjct: 148 SFLKLTLLSFALTLGAM----TLSILMITAVAVVPAVLAIFDLGSGASVLVWLVRWPLLL 203
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ K+ + G + W+V ++ FT Y+ F+ YS Y L
Sbjct: 204 LVVAGAMAALYRWAPSRKAPEWRWVTWGSGIATVVWLVASIAFTIYLENFANYSATYGSL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ L+++++ + I+GAE+N+ M R
Sbjct: 264 GALVGLLLWIWIAVMILIIGAEINSEMEHQTARD 297
>gi|323489179|ref|ZP_08094411.1| putative ribonuclease BN [Planococcus donghaensis MPA1U2]
gi|323397066|gb|EGA89880.1| putative ribonuclease BN [Planococcus donghaensis MPA1U2]
Length = 298
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 118/270 (43%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + F +++ +A+ + LL++ P ++ ++ +L I+ +
Sbjct: 7 FVKELGNEFKKDNATTLAAAQAYYYLLAIVPLLILLLSILPYLQIDP--DEAIEFIRSIL 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P +A D I+ V+ P+ GL T L + +SN + A + N+AY + E RS++
Sbjct: 65 PGEVANTFQDTIVSVVTTPSGGLLTFGILGTLWSASNALTAFINATNQAYGIKETRSFFK 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ I+ G + V ++I + + + ++ +I R ++ +
Sbjct: 125 LKAIAIGLTIGMLVAVIIALVLPIFGGTIIEIIKSTLNLPEQTEIIFQVLRWVISVAVMS 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L ++ P +L G + + W V + F+ Y+ F +YS Y L ++
Sbjct: 185 LVLALMYKLAPNKSFPFKEVLIGAVIATVLWQVVSFGFSIYVSNFGSYSATYGSLGGLIV 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ ++ G+ ++GAE+NA + KK
Sbjct: 245 LMLWFFLTGLILVIGAEINAIIDRRRTAKK 274
>gi|240138821|ref|YP_002963296.1| putative ribonuclease RNAse BN [Methylobacterium extorquens AM1]
gi|240008793|gb|ACS40019.1| putative ribonuclease RNAse BN [Methylobacterium extorquens AM1]
Length = 300
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 105/278 (37%), Positives = 161/278 (57%), Gaps = 1/278 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
F + D+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G+
Sbjct: 2 SRFKKILDVTGIAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGSKSLADEA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 62 GTLIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGI 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R W++TRL S GYV+ ++ ++ + + V PL + P L L L + GRI
Sbjct: 122 REARPWWLTRLESIGYVVCGALAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRI 181
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTM 241
T + + L+ H F+ A + ++S+LPG++ T W + + F +Y+ FS Y++
Sbjct: 182 GVTAFLIALVLVIAHKFVAAGRRPVLSVLPGIVVTLCLWFLAGLGFGYYLDRFSNAYAST 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y GLA+ M LVFLY L F+ G E+N ++I ++
Sbjct: 242 YGGLATAMIFLVFLYWLAAMFLFGGEINGTVIAARRQR 279
>gi|227819758|ref|YP_002823729.1| ribonuclease [Sinorhizobium fredii NGR234]
gi|227338757|gb|ACP22976.1| putative ribonuclease protein [Sinorhizobium fredii NGR234]
Length = 330
Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 128/270 (47%), Gaps = 8/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + + EE + +A+ +S LL++FP + +L GF+ + + + V+
Sbjct: 34 IRDVFWRVVSEISEERVFLIAAGVSFYLLLALFPALGALVSLYGFVANPSDIGSHMAVLD 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P I D++ + A L F L + + ++NG+ AL ++N AY E
Sbjct: 94 ELLPPGSFDLIADQLKSLTTQKASTLSLGFIGGLLVSLWSAANGIAALFDAMNVAYGEKE 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R L+ + A + VI+ +P LAY+ + +L + R A
Sbjct: 154 KRGIVSRTLLCLAFTFAALLFAVILIVAIGVLPAMLAYL--WLDRWVEILTRV--ARWPA 209
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ +G + ++ + P+ ++K+ + G +F+ + W+ + ++++Y+ F+ Y+ Y
Sbjct: 210 ILILATLGTVLIYRYGPSRERAKLRWLNWGAVFSTLLWLAASWIYSYYLENFANYNATYG 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
L +++ ++++++ V I GA LNA +
Sbjct: 270 ALGALIGFMMWVWISMVILITGALLNAELE 299
>gi|170755009|ref|YP_001783041.1| YihY family protein [Clostridium botulinum B1 str. Okra]
gi|169120221|gb|ACA44057.1| YihY family protein [Clostridium botulinum B1 str. Okra]
Length = 285
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 125/265 (47%), Gaps = 2/265 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F+E++ A++S ++ + ++SVFPF++F L G+L H ++ + P
Sbjct: 16 LANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--EDLLLGLKEIMPSNT 73
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ +++
Sbjct: 74 YLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFIKVQIM 133
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L + LV+ F+ V + I R + L
Sbjct: 134 TIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIRYIIMIGVTIFILA 193
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P+ + + M +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++ LV+
Sbjct: 194 ALYYYTPSKRLRWMDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVIVFLVW 253
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
LY+ + I G E+NA ++ +
Sbjct: 254 LYLTSIIVITGGEINALLVSSREKD 278
>gi|90426354|ref|YP_534724.1| ribonuclease BN [Rhodopseudomonas palustris BisB18]
gi|90108368|gb|ABD90405.1| ribonuclease BN [Rhodopseudomonas palustris BisB18]
Length = 297
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 108/279 (38%), Positives = 163/279 (58%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + DA F+ +DGWA+ASHI+LS+L+++FPF++ +LAGF G+
Sbjct: 2 RQLRYAYLVGIDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSLAGFFGSKGLADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP +A ++ EI VL TI L A YF+SNG+E+LR++LNRAY V
Sbjct: 62 AELMLQVWPIQVADALSGEIHDVLTTTRGDALTIGLLLAIYFASNGIESLRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGR 181
E RSWY RL S GY L+A+ T + M+F+ V PL LA R++ P + + ++ R
Sbjct: 122 TETRSWYWLRLESIGYTLVAAFTALAMAFLIVLGPLLLAAARRYVPLVIEDNATLLNVTR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+ L I L +H +LP + ILPG+IFT ++ ++ + F Y+ F+ Y T
Sbjct: 182 YGITITVLIIALFLLHAWLPCGRRTFWQILPGIIFTMVASLLSGIGFGMYLARFASNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNA++I +
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPR 280
>gi|39934322|ref|NP_946598.1| ribonuclease BN [Rhodopseudomonas palustris CGA009]
gi|39648170|emb|CAE26690.1| Ribonuclease BN [Rhodopseudomonas palustris CGA009]
Length = 360
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 10/273 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I E ++ + +A+ + LL++FP I + + + +
Sbjct: 85 IAVGTYERIGDDRLFLVAAGVVFYWLLALFPAITALVSSYALFADAATIGDHLAQLSSIV 144
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + +++ +VLA L F IS A + ++ GV+A+ +LN Y V E R
Sbjct: 145 PAGTYSVVEEQVGRVLANGQTKLGFAFLISLSLALWSANGGVKAIIDALNAVYDVEEQRG 204
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-IWNGRIYATM 186
++ S L A ++ + +A P+ LA + LGNL+ + I GR
Sbjct: 205 FFKLNGFSLLLTLGALGAVLAAIGLVIAAPIVLARI-----GLGNLVAVAIDYGRWPVLA 259
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L F GL ++ P S + PG I +SW+ G+ ++Y+ F+ Y+ Y L
Sbjct: 260 LMTFGGLSLLYRTAPNRPSPPWRWVAPGSIVATLSWLAGSAALSYYLANFADYNATYGSL 319
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + +++++M + + G E+NA + R
Sbjct: 320 GAAIGLMIWMWMTAIVVLAGGEVNAEIEARAGR 352
>gi|167035062|ref|YP_001670293.1| ribonuclease BN [Pseudomonas putida GB-1]
gi|166861550|gb|ABY99957.1| ribonuclease BN [Pseudomonas putida GB-1]
Length = 319
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ AL S+FPF++F L GFL F +
Sbjct: 11 LHRVLVRTVKEFLDDEMSTYASALAYQALFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ +S Y + + L+ + + V P + ++ + ++ +W R +
Sbjct: 130 VWKRIPLSIFYTVGLAGMLLAAAALMVLGPQVMEWIAAQI-GMQEFIVTLWTILRWPVII 188
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L + + ++ +P K K I PG + + W+V ++ F +Y+ TF+ Y+ MY +
Sbjct: 189 ILLMVAVALIYYVMPDVKQKFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIG 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+I+ L++ Y+ +LGAE+NA +
Sbjct: 249 AIIVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|300786173|ref|YP_003766464.1| ribonuclease [Amycolatopsis mediterranei U32]
gi|299795687|gb|ADJ46062.1| putative ribonuclease [Amycolatopsis mediterranei U32]
Length = 337
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 105/266 (39%), Gaps = 4/266 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F ++ A+ ++ LS+FP I+ + G LG + TVID V P
Sbjct: 34 LKRTFKQFNRDNLTDWAAALTYYGALSLFPGIIVLTAILGLLG-PDKIQTVIDNVNQLVP 92
Query: 72 EVIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ I ++ + L + L A + +S + A + N Y + E R Y
Sbjct: 93 GQGKDILVGAIKELTGSRSLAGPLAILGLLGALWSASGYIGAFMRASNAIYGMPEGRPIY 152
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + V L + + VA + +L+ + L +
Sbjct: 153 KVVPLRVALTIAIVVLLALCALGVVATGSVARRLGDLIGLGSTGVLVWEIAKWPVIALLV 212
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++ P + + PG + + WV+ + F Y+ F +Y+ Y LA +
Sbjct: 213 SVAFALLYWVGPNVRQPGFRWLTPGGLLAVVLWVLASAGFALYVANFGSYNKTYGSLAGV 272
Query: 249 MTCLVFLYMLGVFFILGAELNASMII 274
+ LV+L++ + +LGAEL+A +
Sbjct: 273 IAFLVWLWISNLAILLGAELDAELAR 298
>gi|288553956|ref|YP_003425891.1| hypothetical protein BpOF4_04675 [Bacillus pseudofirmus OF4]
gi|288545116|gb|ADC48999.1| hypothetical protein BpOF4_04675 [Bacillus pseudofirmus OF4]
Length = 276
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 125/269 (46%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ +E + ++ + +LS+FP ++F L + + + V +++
Sbjct: 6 FMKHFMEQLKTDPIPDWSATFAYYFMLSIFPLLIFMIALLPYFQLN--IDQVYQILYDYV 63
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P +A + IL+V++ P GL + +AA + +SNGV AL ++NRAY + E R++
Sbjct: 64 PSDLADLFGNTILEVISHPQGGLVSFGVIAAMWSASNGVNALIRAVNRAYGIEETRNFLS 123
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL+S L +V + V L + + F + R + +
Sbjct: 124 LRLLSILLTLCMIFVVVTTLLLPVFGKLIINGMEYLFAVPPETAEFLNVLRWIIGIGLMT 183
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L+F++ P K K ++ G + I W + ++LF++Y+ F YS Y L ++
Sbjct: 184 LVLMFLYWAAPNVKLKFKQVIIGALSATIGWQIISLLFSYYVTNFGNYSATYGSLGGVII 243
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ ++ G+ I+G E+NA++ K
Sbjct: 244 LMLWFFLTGLIIIVGGEINATIFHQKRAK 272
>gi|104782989|ref|YP_609487.1| ribonuclease BN [Pseudomonas entomophila L48]
gi|95111976|emb|CAK16703.1| putative ribonuclease BN [Pseudomonas entomophila L48]
Length = 318
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 126/266 (47%), Gaps = 1/266 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 11 LHRVLVRTVKEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++++ R A ++
Sbjct: 130 VWKRFPLSIIYTVGIAGMLLAAAALMVLGPQVMEWIASQVGLEEAVVVVWTILRWPAIII 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ +P K K I PG + + W+V ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LMMVAVALIYYVMPDVKQKFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
I+ L++ Y+ +LGAE+NA +
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|254992437|ref|ZP_05274627.1| transport protein [Listeria monocytogenes FSL J2-064]
Length = 239
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 117/236 (49%), Gaps = 2/236 (0%)
Query: 45 FGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF 104
A L +L + +V +++ P+ I + + + +L GL +I +A +
Sbjct: 1 IAATLLAYLHIDK--DSVFNMIKEFAPDQIMDFLEENLNNLLTQKNGGLLSIGIIATLWS 58
Query: 105 SSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR 164
+SNG+ A+ SLN+AY V R++ + RL+S + L T+ + V ++
Sbjct: 59 ASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTLAMLATVGATLLLLVFGQQIGMFLI 118
Query: 165 KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
+ L N R T++ +F+ F++ P +S ++S+LPG +F+ I W V
Sbjct: 119 NHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVA 178
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ F +Y+ F YS Y + I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 179 SLGFAYYVNNFGNYSATYGSIGVIIILMLWFYLTGIILMIGGELNATLAIRKKKKE 234
>gi|291483230|dbj|BAI84305.1| hypothetical protein BSNT_01322 [Bacillus subtilis subsp. natto
BEST195]
Length = 275
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + + +G + ++ ++ LLS+FPF++F L +L V+ V+
Sbjct: 3 FLKELFSRYTLHEGQSKSAELAYFFLLSLFPFLIFMLTLTAYLPLS--TDDVLGVIEQYA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + Q L GL + +AA + +SNG+ A+ SLN AY V E RS+ I
Sbjct: 61 PASAMSLVESITHQTLNNRNGGLLSFGIIAALWSASNGMNAIVRSLNHAYDVEENRSFII 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S + T+++ + V F A L + R + L L
Sbjct: 121 VRLTSIFLTIAMVFTILVALLLPVFGREIGRLASDFVGASDLFLSVWAAIRWGVSPLVLL 180
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I +++ P K + ++PG +F I W+V + LF+ Y+ TF+ YS Y + I+
Sbjct: 181 IVFSALYVIAPNKKLSLRFVMPGAVFATIGWIVVSTLFSFYVSTFANYSATYGSIGGIIV 240
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ Y+ G+ ILG E+NA + + RKK
Sbjct: 241 LMIWFYLSGILIILGGEINALL---HKRKK 267
>gi|330877283|gb|EGH11432.1| ribonuclease BN [Pseudomonas syringae pv. glycinea str. race 4]
Length = 313
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 1/264 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L++ Y+ +LGAE+NA +
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIE 275
>gi|170723022|ref|YP_001750710.1| ribonuclease BN [Pseudomonas putida W619]
gi|169761025|gb|ACA74341.1| ribonuclease BN [Pseudomonas putida W619]
Length = 317
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 128/267 (47%), Gaps = 3/267 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I+ ++ F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 11 LHRILVRTVKEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRMQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ +S Y + + L+ + + V P + ++ + +++ +W R A +
Sbjct: 130 VWKRIPLSIIYTVGIAGMLLAAAALMVLGPQVMEWIAAQI-GMQEVIVTVWTILRWPAII 188
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + + ++ +P K K I PG + + W++ ++ F +Y+ TF+ Y+ MY +
Sbjct: 189 ILMMVAVAVIYYVMPDVKQKFRFITPGSVLAVVVWIIASLAFAYYVKTFADYNAMYGSIG 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+I+ L++ Y+ +LGAE+NA +
Sbjct: 249 AIIVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|256789758|ref|ZP_05528189.1| hypothetical protein SlivT_35203 [Streptomyces lividans TK24]
Length = 402
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F +++ A+ ++ +L++FP ++ +L G + V+D V
Sbjct: 101 LLRRVFAEFKDDELTDRAAALTYYGILALFPALLVLVSLLG-IAGDSATQEVLDNVKKLA 159
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +T+ + Q+ A G L + + A + +S V A S N Y V E R
Sbjct: 160 PGSARDVLTNAVEQLQAKAGLGSVLAVVGLVGAVWSASGYVAAFIRSANAVYDVPEGRPV 219
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + ++ V V+ + + V +G+ L +W+ + +L
Sbjct: 220 WKVLPLRVALTVVLLVLAVVSALIVVFTGSLARQAGTAL-GVGDTALTVWSIAKWPVLVL 278
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ P A+ K I PG + + W++ + F Y+ F +Y+ Y LA
Sbjct: 279 LVTFMIAILYWAAPNARVKGFKWISPGSLVALLIWLLASAGFAFYVANFGSYNKTYGTLA 338
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 339 GVIIFLVWLWVTNLAILLGLEFDAELARQR 368
>gi|320327458|gb|EFW83471.1| ribonuclease BN, putative [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 316
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 1/264 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q L GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L++ Y+ +LGAE+NA +
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIE 275
>gi|319404860|emb|CBI78461.1| ribonuclease RNAse bn transmembrane protein [Bartonella rochalimae
ATCC BAA-1498]
Length = 275
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 106/265 (40%), Positives = 164/265 (61%), Gaps = 1/265 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ H+ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P I+ + P+ IA
Sbjct: 1 MSHYFRDNGSAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTPQKIEALVQLLPDAIA 60
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+P++ EI+ VL L T+S + AAYF+SNGV ALR +LN+AYRV++ RS + R S
Sbjct: 61 EPLSKEIITVLTTQRGDLLTLSVIGAAYFASNGVGALRTALNKAYRVIDRRSLFFCRFQS 120
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+V++ +V LV++SF+ V PL + ++ + + II R ++ LF L+
Sbjct: 121 LFFVIIGTVGLVVISFLLVLAPLLIKIMQNHSSQITEYIGIIRLWRYIIAIVVLFTSLLI 180
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
VH +LPA + K+ ILPG++ T W + ++ F Y+ F Y++ YAGL SIM ++FL
Sbjct: 181 VHKWLPAGQRKVRDILPGILVTIFVWFLTSIAFAQYLTMF-NYASTYAGLTSIMVAIIFL 239
Query: 256 YMLGVFFILGAELNASMIIYYWRKK 280
Y+L FILG E+NA++I Y +
Sbjct: 240 YILSAIFILGGEINAAIIFYRDHAQ 264
>gi|254561424|ref|YP_003068519.1| ribonuclease RNAse BN [Methylobacterium extorquens DM4]
gi|254268702|emb|CAX24661.1| putative ribonuclease RNAse BN [Methylobacterium extorquens DM4]
Length = 300
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 105/278 (37%), Positives = 160/278 (57%), Gaps = 1/278 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
F + D+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G+
Sbjct: 2 SRFKKILDVTGIAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGSKSLADEA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 62 GTLIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGI 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R W++TRL S GYV+ ++ ++ + + V PL + P L L L + GRI
Sbjct: 122 REARPWWLTRLESIGYVVCGALAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRI 181
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTM 241
T + + L+ H F+ A + ++S LPG++ T W + + F +Y+ FS Y++
Sbjct: 182 GVTAFLIALVLVIAHKFVAAGRRPVLSALPGIVVTLCLWFLAGLGFGYYLDRFSNAYAST 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y GLA+ M LVFLY L F+ G E+N ++I ++
Sbjct: 242 YGGLATAMIFLVFLYWLAAMFLFGGEINGTVIAARRQR 279
>gi|69244644|ref|ZP_00602908.1| Ribonuclease BN [Enterococcus faecium DO]
gi|257882958|ref|ZP_05662611.1| ribonuclease BN [Enterococcus faecium 1,231,502]
gi|257885209|ref|ZP_05664862.1| ribonuclease BN [Enterococcus faecium 1,231,501]
gi|257891460|ref|ZP_05671113.1| ribonuclease BN [Enterococcus faecium 1,231,410]
gi|258614499|ref|ZP_05712269.1| ribonuclease BN, putative [Enterococcus faecium DO]
gi|260560536|ref|ZP_05832710.1| ribonuclease BN [Enterococcus faecium C68]
gi|261206549|ref|ZP_05921249.1| ribonuclease BN [Enterococcus faecium TC 6]
gi|289565459|ref|ZP_06445908.1| ribonuclease BN [Enterococcus faecium D344SRF]
gi|293553216|ref|ZP_06673853.1| ribonuclease BN [Enterococcus faecium E1039]
gi|293560238|ref|ZP_06676738.1| ribonuclease BN [Enterococcus faecium E1162]
gi|293568268|ref|ZP_06679592.1| ribonuclease BN [Enterococcus faecium E1071]
gi|294614679|ref|ZP_06694581.1| ribonuclease BN [Enterococcus faecium E1636]
gi|294619024|ref|ZP_06698519.1| ribonuclease BN [Enterococcus faecium E1679]
gi|294620967|ref|ZP_06700166.1| ribonuclease BN [Enterococcus faecium U0317]
gi|314950073|ref|ZP_07853360.1| YihY family protein [Enterococcus faecium TX0082]
gi|68196235|gb|EAN10664.1| Ribonuclease BN [Enterococcus faecium DO]
gi|257818616|gb|EEV45944.1| ribonuclease BN [Enterococcus faecium 1,231,502]
gi|257821061|gb|EEV48195.1| ribonuclease BN [Enterococcus faecium 1,231,501]
gi|257827820|gb|EEV54446.1| ribonuclease BN [Enterococcus faecium 1,231,410]
gi|260073538|gb|EEW61866.1| ribonuclease BN [Enterococcus faecium C68]
gi|260079259|gb|EEW66950.1| ribonuclease BN [Enterococcus faecium TC 6]
gi|289162788|gb|EFD10639.1| ribonuclease BN [Enterococcus faecium D344SRF]
gi|291588980|gb|EFF20804.1| ribonuclease BN [Enterococcus faecium E1071]
gi|291592417|gb|EFF24024.1| ribonuclease BN [Enterococcus faecium E1636]
gi|291594685|gb|EFF26067.1| ribonuclease BN [Enterococcus faecium E1679]
gi|291599425|gb|EFF30443.1| ribonuclease BN [Enterococcus faecium U0317]
gi|291602626|gb|EFF32841.1| ribonuclease BN [Enterococcus faecium E1039]
gi|291605810|gb|EFF35244.1| ribonuclease BN [Enterococcus faecium E1162]
gi|313643608|gb|EFS08188.1| YihY family protein [Enterococcus faecium TX0082]
Length = 307
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I + + + + ++ LLS+FP I+ N+ FL Q TV+ +
Sbjct: 13 LMRFIETTQKRITDSEMSTTSVVVAYYLLLSLFPLIIAFGNILPFLHIDQ--ETVLTYLR 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE + + I I +L + GL ++SALAA + +S + AL+I++N+AY V ++
Sbjct: 71 EVIPETVYQFIGPAIKDLLTQSSGGLLSVSALAALWSASQSINALQIAMNKAYGVENRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I R S ++L + + ++ V L L ++ N + + T++
Sbjct: 131 FLIVRFFSLIVIVLFMIAISGVTIVLGLGQLILDAIQPIVQIPVNFIDQFQTLKWPITLV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALF+ + ++L +P A+ K+ +I+PG IF + W++ + +F+ Y F+T + Y + S
Sbjct: 191 ALFVIMFLIYLIVPNAQLKLKTIIPGTIFATVGWMLLSQVFSIYARYFATRISGYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L ILG +NA + Y
Sbjct: 251 FIVLMLWLNFAATIIILGGIINAVVQEY 278
>gi|16077857|ref|NP_388671.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308625|ref|ZP_03590472.1| hypothetical protein Bsubs1_04393 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312949|ref|ZP_03594754.1| hypothetical protein BsubsN3_04344 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317874|ref|ZP_03599168.1| hypothetical protein BsubsJ_04293 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322147|ref|ZP_03603441.1| hypothetical protein BsubsS_04389 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321314517|ref|YP_004206804.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
gi|81342316|sp|O34437|YFKH_BACSU RecName: Full=Putative ribonuclease-like protein yfkH
gi|2626820|dbj|BAA23398.1| YfkH [Bacillus subtilis]
gi|2633114|emb|CAB12619.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. subtilis str. 168]
gi|320020791|gb|ADV95777.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis BSn5]
Length = 275
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + + +G + ++ ++ LLS+FPF++F L +L V+ V+
Sbjct: 3 FLKELFSRYTLHEGQSKSAELAYFFLLSLFPFLIFMLTLTAYLPLS--TDDVLGVIEQYA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + Q L GL + +AA + +SNG+ A+ SLN AY V E RS+ I
Sbjct: 61 PASAMSLVESITHQTLNNRNGGLLSFGIIAALWSASNGMNAIVRSLNHAYDVEENRSFII 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S + T+++ + V F A L + R + L L
Sbjct: 121 VRLTSIFLTIAMVFTILVALLLPVFGREIGRLASDFVGASDLFLSVWAAIRWGVSPLVLL 180
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I +++ P K + ++PG +F I W++ + LF+ Y+ TF+ YS Y + I+
Sbjct: 181 IVFSALYVIAPNKKLSLRFVMPGAVFATIGWIIVSTLFSFYVSTFANYSATYGSIGGIIV 240
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ Y+ G+ ILG E+NA + + RKK
Sbjct: 241 LMIWFYLSGILIILGGEINALL---HKRKK 267
>gi|227550490|ref|ZP_03980539.1| ribonuclease BN [Enterococcus faecium TX1330]
gi|257888517|ref|ZP_05668170.1| ribonuclease BN [Enterococcus faecium 1,141,733]
gi|257897108|ref|ZP_05676761.1| ribonuclease BN [Enterococcus faecium Com12]
gi|257899047|ref|ZP_05678700.1| ribonuclease BN [Enterococcus faecium Com15]
gi|293377331|ref|ZP_06623535.1| YihY family protein [Enterococcus faecium PC4.1]
gi|293572525|ref|ZP_06683504.1| ribonuclease BN [Enterococcus faecium E980]
gi|227180391|gb|EEI61363.1| ribonuclease BN [Enterococcus faecium TX1330]
gi|257824571|gb|EEV51503.1| ribonuclease BN [Enterococcus faecium 1,141,733]
gi|257833673|gb|EEV60094.1| ribonuclease BN [Enterococcus faecium Com12]
gi|257836959|gb|EEV62033.1| ribonuclease BN [Enterococcus faecium Com15]
gi|291607442|gb|EFF36785.1| ribonuclease BN [Enterococcus faecium E980]
gi|292644023|gb|EFF62129.1| YihY family protein [Enterococcus faecium PC4.1]
Length = 307
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I + + + + ++ LLS+FP I+ N+ FL Q TV+ +
Sbjct: 13 LMRFIETTQKRITDSEMSTTSVVVAYYLLLSLFPLIIAFGNILPFLHIDQ--ETVLTYLR 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE + + I I +L + GL ++SALAA + +S + AL+I++N+AY V ++
Sbjct: 71 EVIPETVYQFIGPAIKDLLTQSSGGLLSVSALAALWSASQSINALQIAMNKAYGVENRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I R S ++L + + ++ V L L ++ N + + T++
Sbjct: 131 FLIVRFFSLIVIVLFMIAISGVTIVLGLGQLILDAIQPIVQIPVNFIDQFQTLKWPITLV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALF+ + ++L +P A+ K+ +I+PG IF + W++ + +F+ Y F+T + Y + S
Sbjct: 191 ALFVIMFLIYLIVPNAQLKLKTIIPGTIFATVGWMLLSQVFSIYARYFATRISGYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L ILG +NA + Y
Sbjct: 251 FIVLMLWLNFAATIIILGGIINAVVQEY 278
>gi|296331881|ref|ZP_06874346.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305673493|ref|YP_003865165.1| hypothetical protein BSUW23_04000 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296150959|gb|EFG91843.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305411737|gb|ADM36856.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 275
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 5/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + + +G + ++ ++ LLS+FPF++F L +L V+ VV
Sbjct: 2 NFLKELFSRYTLHEGQSKSAELAYFFLLSLFPFLIFMLTLTAYLPIS--TNDVLGVVKQY 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + Q L GL + +AA + +SNG+ A+ SLN AY V E RS+
Sbjct: 60 APASAMSLVESITQQTLNNRNGGLLSFGIIAALWSASNGMNAIVRSLNHAYEVEENRSFI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I RL S + T+++ + V F A L I R + L L
Sbjct: 120 IVRLTSIFLTIAMVFTILVALLLPVFGREIGRLASDFVGASDLFLSIWAAIRWGVSPLVL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++ P K + ++PG +F I W+V + LF+ Y+ TF+ YS Y + I+
Sbjct: 180 LIVFSALYVIAPNKKLSLRFVMPGAVFATIGWIVVSTLFSFYVSTFANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ Y+ G+ ILG E+NA + + RKK
Sbjct: 240 VLMIWFYLSGILIILGGEINALL---HKRKK 267
>gi|257880157|ref|ZP_05659810.1| ribonuclease BN [Enterococcus faecium 1,230,933]
gi|257814385|gb|EEV43143.1| ribonuclease BN [Enterococcus faecium 1,230,933]
Length = 313
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 130/259 (50%), Gaps = 2/259 (0%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ + + + ++ LLS+FP I+ N+ FL Q TV+ + PE + +
Sbjct: 9 KRITDSEMSTTSVVVAYYLLLSLFPLIIAFGNILPFLHIDQ--ETVLTYLREVIPETVYQ 66
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I +L + GL ++SALAA + +S + AL+I++N+AY V +++ I R S
Sbjct: 67 FIGPAIKDLLTQSSGGLLSVSALAALWSASQSINALQIAMNKAYGVENRKNFLIVRFFSL 126
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
++L + + ++ V L L ++ N + + T++ALF+ + +
Sbjct: 127 IVIVLFMIAISGVTIVLGLGQLILDAIQPIVQIPVNFIDQFQTLKWPITLVALFVIMFLI 186
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+L +P A+ K+ +I+PG IF + W++ + +F+ Y F+T + Y + S + +++L
Sbjct: 187 YLIVPNAQLKLKTIIPGTIFATVGWMLLSQVFSIYARYFATRISGYQIIGSFIVLMLWLN 246
Query: 257 MLGVFFILGAELNASMIIY 275
ILG +NA + Y
Sbjct: 247 FAATIIILGGIINAVVQEY 265
>gi|290958769|ref|YP_003489951.1| ribonuclease [Streptomyces scabiei 87.22]
gi|260648295|emb|CBG71406.1| putative ribonuclease [Streptomyces scabiei 87.22]
Length = 356
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 117/272 (43%), Gaps = 6/272 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ ++ F +++ A+ ++ +L++FP ++ +L G +G V+D +
Sbjct: 49 RSVLKGTLKEFKKDELTDRAAALTYYGILALFPALLALVSLLGIVG-ESATREVLDNIQK 107
Query: 69 AWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +T+ + Q+ G + + + A + +S V A S N Y + E R
Sbjct: 108 LAPGAARDVLTNAVQQMQNNAGLGSVMAIVGLVLAVWSASGYVAAFIRSANAVYDIPEGR 167
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYAT 185
+ + G ++ V VI + + V V +G+ L +W+ +
Sbjct: 168 PVWKVLPVRVGLTMVLMVMAVISALIVVFTGGLAREVGTAL-GVGDTALTVWSIAKWPVL 226
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + + ++ P AK + I PG + + W+ + F Y+ F +Y+ Y
Sbjct: 227 ILLVTMMIAVLYWATPNAKVRGFRWITPGSLLALLIWMAASAGFAFYVANFGSYNKTYGA 286
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+A ++ LV+L++ + +LG E +A +
Sbjct: 287 VAGVIIFLVWLWITNLAILLGLEFDAELARRR 318
>gi|291455251|ref|ZP_06594641.1| membrane protein [Streptomyces albus J1074]
gi|291358200|gb|EFE85102.1| membrane protein [Streptomyces albus J1074]
Length = 382
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + F +++ A+ ++ +L++FP ++ +L G G V++ +
Sbjct: 86 VLRRTVAEFQDDELADRAAALTYYGVLALFPGLLVLVSLLGVAG-ESTTRRVLESIKKMA 144
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +T + V G L + LAA + +S V A S N Y + E R
Sbjct: 145 PGPARDVVTSAVEGVQGAGGVGSLLAVVGVLAALWSASGYVGAFIRSSNAVYDMPEGRPV 204
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G + A V + + S + V LA +G+ L +W+ + +L
Sbjct: 205 WKVLPVRVGTTV-ALVVMAVGSALIVVFTGDLARRAGSLLGIGDTALTVWSIAKWPVLLL 263
Query: 189 LFIGLI-FVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L IG+I + P K + PG + W++ + F Y+ F +Y+ Y LA
Sbjct: 264 LVIGMIALLFWAAPNTKGPGFRWVTPGSFLALVIWLLASAGFAVYVANFGSYNKTYGALA 323
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 324 GVVVFLVWLWISNIAILLGLEFDAELARER 353
>gi|222055690|ref|YP_002538052.1| ribonuclease BN [Geobacter sp. FRC-32]
gi|221564979|gb|ACM20951.1| ribonuclease BN [Geobacter sp. FRC-32]
Length = 308
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 50 AGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV 109
G+L + ++ + PE + D + + GL ++ + A + SSN +
Sbjct: 57 IGYLPIPGLLDFILTTMQRFLPEQAFSLVQDNVKSLFGNKQGGLLSLGFVLALWTSSNAI 116
Query: 110 EALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
++ +NR Y+V E R ++ RL + V + SV ++ + + P +++
Sbjct: 117 TSIMDIMNRLYQVQEGRPFWKVRLTAIALVTVLSVLFILSLVLLMFGPKLGSFIAGITH- 175
Query: 170 LGNLLLIIWNGRI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
LG+ I+WN I AT+ L + + ++ F P + I PG + WV+ ++ F
Sbjct: 176 LGHFFEILWNILIAPATLFMLMLAIAIIYYFTPDVEQNWKWISPGAVIAIPVWVLASLAF 235
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ Y+ F +Y+ Y + +++ L +LY+ G + GAE+N+++
Sbjct: 236 SFYVNNFGSYNKTYGSIGAVIILLFWLYISGFIILAGAEINSAVE 280
>gi|16264680|ref|NP_437472.1| hypothetical protein SM_b21356 [Sinorhizobium meliloti 1021]
gi|307318683|ref|ZP_07598116.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|15140818|emb|CAC49332.1| conserved hypothetical membrane protein [Sinorhizobium meliloti
1021]
gi|306895710|gb|EFN26463.1| ribonuclease BN [Sinorhizobium meliloti AK83]
Length = 330
Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 123/270 (45%), Gaps = 8/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + EE +A+ +S LLS+FP + ++ G + + T + ++
Sbjct: 34 MRDVFWRVFSEIGEERVMLIAAGVSFYLLLSLFPALGALVSIYGLVADPSEIGTHVGILQ 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P I D++ + L F +S + + ++NG+ AL ++N AY E
Sbjct: 94 ALLPADSYGLIMDQLETLTTQKPSTLGIGFFVSLSISLWLAANGIAALFDAMNVAYGERE 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L+ + A + V + +P LAYV + L+ R A
Sbjct: 154 KRGFLSRTLLCLAFTFAALLFAVALIAAIGVVPAVLAYVW----VDRWVELVTRAARWPA 209
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + G I ++ F P+ ++K+ + G +F+ + W+ + LF++Y+ F+ Y+ Y
Sbjct: 210 VLLLVTFGTILIYRFGPSRERAKLRWLNWGAVFSTLFWLAASWLFSYYLEHFANYNATYG 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
L ++ + ++++ + I+GA +NA +
Sbjct: 270 ALGALAGLMTWVWISVMILIIGALINAELE 299
>gi|254488995|ref|ZP_05102200.1| YihY family protein [Roseobacter sp. GAI101]
gi|214045864|gb|EEB86502.1| YihY family protein [Roseobacter sp. GAI101]
Length = 316
Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 87/261 (33%), Positives = 145/261 (55%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ +A +D + +A +++ LL+VFPF++F +++ F+G+ ++ +
Sbjct: 37 WGVMREAGLRLWSDDAFGLAGNVAFRVLLAVFPFLIFTSSMTAFVGSQSMAEDLVSFLLA 96
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE + +PI E+ QV+ V G+ + L +F+ GV+ +R+ LNRAY V E RSW
Sbjct: 97 IVPETLIEPIVSEVKQVMTVQRGGVLSTGILLTIWFALGGVDGVRVGLNRAYGVRETRSW 156
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
Y+ + V++AS+ LV++ ++ V P A +++ FP + I R A +
Sbjct: 157 YVVYPVMVLMVIIASLVLVLVGYLLVLAPRAGSWLHVLFPGFDPASVTIRLVRYPAAAII 216
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L H+FLPA +++ SI PGV+FT +W V FT Y+ F+TY+T Y GLA I
Sbjct: 217 LVFSLFLAHVFLPARRTRFSSIYPGVLFTVAAWTSLTVAFTFYLANFATYATYYGGLAGI 276
Query: 249 MTCLVFLYMLGVFFILGAELN 269
+ L FLY+ + I G ELN
Sbjct: 277 VAALYFLYLAALVLIFGGELN 297
>gi|126649530|ref|ZP_01721771.1| ribonuclease BN, putative [Bacillus sp. B14905]
gi|126593855|gb|EAZ87778.1| ribonuclease BN, putative [Bacillus sp. B14905]
Length = 305
Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ D I + A+++ ++ LLS FP ++F L +L V +
Sbjct: 34 FVQDLIGRLKRVEISALSAQLAYFFLLSFFPLLIFLVTLLPYLNLE--TTQVYSFLVNVL 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + K I + + ++L L +I L + +S G+ AL +LN+AY E R+ +
Sbjct: 92 PDEVYKLIENTLKEILTNRNSSLLSIGVLGTIWSASKGINALIRALNKAYDT-EGRAGIL 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S + + + + + + V ++ + N R + +F
Sbjct: 151 DRGLSLVFTVALVIVIAVALLLPVFGQQIGHFLFSIVGIEEQFESVWHNLRWSIPPILIF 210
Query: 191 IGLIFVHLFLPA--AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I L+ ++ F+P + KI+ + PG +F + W++ F+ YI F+ YS Y + +
Sbjct: 211 IVLMGIYWFVPNTSPRLKILGVWPGAMFATLGWLMVTYAFSFYINNFANYSATYGSIGGV 270
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++LY G+ I G LNA+M +K+
Sbjct: 271 IILMLWLYFTGIILIFGGVLNATMQKRALQKQ 302
>gi|302532213|ref|ZP_07284555.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
gi|302441108|gb|EFL12924.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
Length = 381
Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 114/270 (42%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + F +++ A+ ++ +L++FP ++ + + V+D +
Sbjct: 65 VLRGTVREFGDDELADRAAALTYYGVLALFPGLLVLVS-LLGIAGDSVTRQVLDQLQALT 123
Query: 71 PEVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I++ + ++ A + L + + A + +S V A + N Y V E R
Sbjct: 124 PGAARDVISEAVERLRADAGVSSFLAAVGPVVAVWSASGYVGAFIRAANAVYDVPEGRPV 183
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G + L + S + V LA +G+ + +W+ + +L
Sbjct: 184 WRVLPLRLGLTVTLM-GLAVASALIVVFTGGLARRAGAALGVGDTAMAVWSTVKWPVLLV 242
Query: 189 LFIGLI-FVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +I ++ P A+ + + PG + + W+ + F Y+ F++Y+ Y LA
Sbjct: 243 LVTAMIAILYWAAPNARGRGFRWVSPGSVLALVIWMTASGGFAFYVAHFASYNRTYGTLA 302
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 303 GVIIFLVWLWITNLAVLLGLEFDAELSRQR 332
>gi|296534422|ref|ZP_06896866.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
gi|296265251|gb|EFH11432.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
Length = 340
Score = 198 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 59/275 (21%), Positives = 116/275 (42%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I+ A E+ A+ ++ ALLSVFP + +L G V + G
Sbjct: 52 WSILKRAAIEANEDRIMTEAAGVTFYALLSVFPALTALVSLFGLFADPAMVGQQLQQAEG 111
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYRVVEM 125
P + I +++ ++ + L + L A + ++ G +A+ +LN Y E
Sbjct: 112 FIPAGGMQIIDEQLRRLASGERGSLGFSAVLGLGVALWSANQGTKAMFDALNIVYEEKEK 171
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + LI+ + L A V ++ + + L V F + L++ R
Sbjct: 172 RGFLRRTLITLAFTLGALVFTMLAM----SAVVVLPVVLAFAGFESSTELLLRLARWPLL 227
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + L ++ F P+ K++ + G +F ++W + F+ Y+ F Y Y
Sbjct: 228 ILFITALLATLYRFGPSREKARWRWVSWGGVFAALAWAALSAGFSFYVGNFGNYDATYGS 287
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ + ++++ + + GAELNA M R
Sbjct: 288 LGAVIGFMTWIWLSAMVVLFGAELNAEMEHQTARD 322
>gi|332992062|gb|AEF02117.1| putative ribonuclease protein [Alteromonas sp. SN2]
Length = 318
Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 119/276 (43%), Gaps = 8/276 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ I+ + + +A+ ++ LL++FP + +L G + + + + +
Sbjct: 16 TLKNWWSIVKRTFTNIQSHNIPLIAAGVAFYCLLAIFPLLGATISLYGLMVSPEELQNHM 75
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAY 120
++ P + I +++ + + L F ++ + + SS G AL + N Y
Sbjct: 76 ALLVNVVPSDSSYIIEEQLKNLTQKSSSALGWGFFLTLFLSLWSSSKGANALITACNITY 135
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R ++ + + +T+++ +P ++++ + I W
Sbjct: 136 IEDNGRGFFKGLIARITGTICMIITVIVALVCITVLPELISWISGGLISFKQASWITW-- 193
Query: 181 RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L IGL ++ + P + ++ + PG +F + W+ + F+ Y+ F++Y+
Sbjct: 194 --PVLLLLFNIGLSALYRYAPHRRSAQWRWVTPGSLFATLLWIAASYGFSIYLNEFASYN 251
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y + I+ L++LY+ ++GAE+N+S+ +
Sbjct: 252 KTYGSVGGIIILLMWLYLSAYIILIGAEVNSSIELQ 287
>gi|227535434|ref|ZP_03965483.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227186917|gb|EEI66984.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 349
Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ AI E + A+ ++ LLS+FP I+F AN + G + + A
Sbjct: 56 FVKLAINRITESNIGQSAAALAYYTLLSLFPLILFVANALPYFGL--TYKGLAAYLTQAI 113
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + I +L + GL I A+A + +S GV L++ N+ Y V +++ I
Sbjct: 114 PSNVMNWLDPVIANLLDSSSGGLLGIGAVATLWAASLGVNGLKMGFNQIYGVESSQNFII 173
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL+S + + + VF L ++ + L R T+ ALF
Sbjct: 174 QRLLSMLMTFTLIIVMGAILIVFAFGRQFLEWLIPLLRLNDDWLRTFNTLRWPVTITALF 233
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++F++ FLP K ++ ++LPG FT W++ A F+ Y+ F T Y + + +
Sbjct: 234 VIIMFLNYFLPNVKIRMWTVLPGTAFTVAGWLLIAQAFSLYMKYFGTRYLSYGTIGTFIA 293
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++L + + GA +NA Y+ +
Sbjct: 294 IMLWLNFSALVLLWGAVINALTAEYFIGR 322
>gi|309812239|ref|ZP_07705997.1| YihY family protein [Dermacoccus sp. Ellin185]
gi|308433926|gb|EFP57800.1| YihY family protein [Dermacoccus sp. Ellin185]
Length = 522
Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 110/275 (40%), Gaps = 8/275 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAW 70
A F ++ +A+ ++ ++ ++FP I+ + G G Q +VI+ +
Sbjct: 21 FKRAAAKFSQDQCTDLAASLTYYSVQAMFPAIIAAVSTIGLFGNGQKTTDSVIEAIAEIV 80
Query: 71 ---PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ I + T I + A F + L + + +S V A NR Y V E R
Sbjct: 81 GKNKDDIPEGFTTFINNLQGGGAGLAFILGILVSLWSASGYVNAFSRMSNRIYDVAEGRP 140
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ RL + ++A V ++ +F V + LG +W+ ++ +
Sbjct: 141 VFKLRLWLYFVTIVAFVLAILAAFSLVVSGGIAEQIFDSV-GLGTQAATVWDWAKVPFVV 199
Query: 187 LALFIGLIFVHLFLPAAKSKIMSIL--PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + + P K + PG + ++ W +G + F Y+ Y Y
Sbjct: 200 VVVIFIISLLFWGTPNVKRPFKQAMFNPGAVLAFVIWAIGTIAFAWYVSNMGNYGKTYGP 259
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+A+ + L++L++ + + GAE ++ + K
Sbjct: 260 MATPIILLLWLWITNLAMLFGAEFDSETLRTRQLK 294
>gi|289773646|ref|ZP_06533024.1| ribonuclease BN family membrane protein [Streptomyces lividans
TK24]
gi|289703845|gb|EFD71274.1| ribonuclease BN family membrane protein [Streptomyces lividans
TK24]
Length = 394
Score = 198 bits (505), Expect = 6e-49, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F +++ A+ ++ +L++FP ++ +L G + V+D V
Sbjct: 93 LLRRVFAEFKDDELTDRAAALTYYGILALFPALLVLVSLLG-IAGDSATQEVLDNVKKLA 151
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +T+ + Q+ A G L + + A + +S V A S N Y V E R
Sbjct: 152 PGSARDVLTNAVEQLQAKAGLGSVLAVVGLVGAVWSASGYVAAFIRSANAVYDVPEGRPV 211
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + ++ V V+ + + V +G+ L +W+ + +L
Sbjct: 212 WKVLPLRVALTVVLLVLAVVSALIVVFTGSLARQAGTAL-GVGDTALTVWSIAKWPVLVL 270
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ P A+ K I PG + + W++ + F Y+ F +Y+ Y LA
Sbjct: 271 LVTFMIAILYWAAPNARVKGFKWISPGSLVALLIWLLASAGFAFYVANFGSYNKTYGTLA 330
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 331 GVIIFLVWLWVTNLAILLGLEFDAELARQR 360
>gi|148546571|ref|YP_001266673.1| putative ribonuclease BN [Pseudomonas putida F1]
gi|148510629|gb|ABQ77489.1| putative ribonuclease BN [Pseudomonas putida F1]
Length = 318
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ AL S+FPF++F L GFL F +
Sbjct: 11 LHRVLVRTVKEFLDDEMSTYASALAYQALFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ +S Y + + L+ + + V P + ++ + ++ +W R +
Sbjct: 130 VWKRIPLSIFYTVGLAGMLLAAAALMVLGPQVMEWIAAQI-GMQEFIVTLWTILRWPVII 188
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L + + ++ +P K + I PG + + W+V ++ F +Y+ TF+ Y+ MY +
Sbjct: 189 ILLMVAVALIYYVMPDVKQQFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIG 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+I+ L++ Y+ +LGAE+NA +
Sbjct: 249 AIIVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|81429127|ref|YP_396128.1| putative ribonuclease [Lactobacillus sakei subsp. sakei 23K]
gi|78610770|emb|CAI55821.1| Putative ribonuclease [Lactobacillus sakei subsp. sakei 23K]
Length = 312
Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats.
Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 2/263 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I I E + A I+ ALLS FP ++ N+ + V +V D V A
Sbjct: 25 FIKLMIRRSSEANISDNAKIIAYYALLSFFPLLIVIGNILPYFQLD--VLSVADYVKSAV 82
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P I I + +L GL ++ L + +S G+ AL+IS+NRAYRV ++ ++ +
Sbjct: 83 PPTIFNRIMPILQSLLNKRNSGLLSVGILGTLWAASKGINALKISINRAYRVDKIHNFIL 142
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RLIS G L+ + LV + VF L ++ F + + + + T + LF
Sbjct: 143 KRLISLGTTLVLLLLLVSLIVVFTFGQQFLEFITPIFKIPEDYINVFGQLKWPITSIVLF 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ LIFV+ F+P K ++ S+LPG T + W++ A F+ Y+ F T Y + + +
Sbjct: 203 VILIFVYFFVPNVKMQLRSVLPGAFLTTVGWLILAQAFSLYMRYFGTSWNSYGTIGAFII 262
Query: 251 CLVFLYMLGVFFILGAELNASMI 273
L++L + + GA +N ++
Sbjct: 263 LLLWLNYSAMVLMFGAVVNVAIE 285
>gi|170750736|ref|YP_001756996.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170657258|gb|ACB26313.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 295
Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats.
Identities = 110/266 (41%), Positives = 155/266 (58%), Gaps = 1/266 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A + FV DGWA+ASHI+LS+L S+FPF++ A LAG G ++F AWP I
Sbjct: 4 AAQRFVSHDGWAIASHIALSSLTSLFPFLILLAALAGLFGTQSLADEAGVLIFDAWPREI 63
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
AKPI E+ +VL G+ T+ AL A YFSS+GVE+LR+ LNRAY + E R W++TRL
Sbjct: 64 AKPIVGEVHRVLTEQRSGVLTLGALFALYFSSSGVESLRVGLNRAYGLRESRPWWLTRLE 123
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
S GYV+ + ++ + + V PL V P L L L + GRI T L L + L+
Sbjct: 124 SIGYVICGAFAMLAFALLVVLGPLIWRNVVLVAPGLEPLSLTVAIGRIAVTALLLAVVLV 183
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYAGLASIMTCLV 253
H F+ A + I+S+LPG+ T + W + F +Y+ FS Y++ Y GLA+ M LV
Sbjct: 184 IAHKFVAAGRRSILSVLPGIGVTLVLWFFAGLGFGYYLDRFSNAYASTYGGLATAMVFLV 243
Query: 254 FLYMLGVFFILGAELNASMIIYYWRK 279
FLY L F+ G E+N ++I +
Sbjct: 244 FLYWLAAMFLFGGEINGTVIAARRSR 269
>gi|330991211|ref|ZP_08315163.1| Putative ribonuclease-like protein yfkH [Gluconacetobacter sp.
SXCC-1]
gi|329761704|gb|EGG78196.1| Putative ribonuclease-like protein yfkH [Gluconacetobacter sp.
SXCC-1]
Length = 313
Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 120/274 (43%), Gaps = 7/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V ++ + V + A+ + A LS+FP + +L G L Q V + V+
Sbjct: 19 VRQVLRQVARNIVSDQITLAAAGCAFYATLSLFPAMSTLISLYGLLFDLQTVEPQLVVLR 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P I D I ++A L IS A + +S +L +++N AY E
Sbjct: 79 NLLPPSAYGVIGDRIHLLVAESHSSLTLNLIISTTIATWSASAATRSLIMAMNVAYNTPE 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF---PALGNLLLIIWNGR 181
RS+ + ++ G + ++ + VA+P + Y+ + P G++ L+I G
Sbjct: 139 TRSFVRFQAMAMGLTFCSICGGILTLALMVALPFLIDYLPEHLSLAPPPGSVELLIHMGG 198
Query: 182 IYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L + ++ F P + ILPG + + W++ + F++Y+ + YS
Sbjct: 199 PILMLLFVLSLCSVLYRFGPNRPHTYWRCILPGSVGATLLWLLSSSGFSYYVSHIAGYSA 258
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y L + + +++ Y+ +LGAELNA + I
Sbjct: 259 TYGPLGAFIAIMMWFYVSAYVVLLGAELNAGLEI 292
>gi|225025891|ref|ZP_03715083.1| hypothetical protein EUBHAL_00119 [Eubacterium hallii DSM 3353]
gi|224956788|gb|EEG37997.1| hypothetical protein EUBHAL_00119 [Eubacterium hallii DSM 3353]
Length = 325
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ +++++ D ++ ++ A + + LLS+FPF++F L ++ +
Sbjct: 4 RKRIKNLYELVMDFLKKCSDDHVGAFGAMSAFFILLSIFPFMIFLLTLTRYIPFSK--DD 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+I ++ I + ++ + IS +AA + SS GV ++ I LN Y
Sbjct: 62 IIVILTRMISFEEGSLIKSIVNEIYRKTGTTVSAISIIAALWSSSRGVYSIVIGLNSVYD 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ E R+++ RL S Y LL ++ + +M ++V +Y + FP + +L + R
Sbjct: 122 IDENRNYFAIRLFSLVYTLLFALMISVMLVMWVFGNSLYSYFLQKFPFVVPILGYFMHKR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
I +++ L + + ++ ++P S PG + + WV +V + Y+ F+ +S +
Sbjct: 182 IIFSLIFLTLLFMIIYKWIPNRVSSFRKQFPGALIATLGWVAVSVGCSIYMDNFTNFSYI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELN 269
Y +A IM L++LY GAE+N
Sbjct: 242 YGSMAGIMILLLWLYFCMSMVFYGAEVN 269
>gi|119715572|ref|YP_922537.1| putative ribonuclease BN [Nocardioides sp. JS614]
gi|119536233|gb|ABL80850.1| putative ribonuclease BN [Nocardioides sp. JS614]
Length = 377
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 114/267 (42%), Gaps = 3/267 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
+ + F ++ +A+ ++ A+L+VFP + +L G +G V T++ +V
Sbjct: 56 VARKTVREFSDDQCTDLAAALTYYAVLAVFPAAIALTSLLGLVGQGTSSVETLLGIVDDL 115
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALA-AAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ K + D ++++ A GL + LA A + +S V A ++NR Y + E R
Sbjct: 116 GGASVVKSVHDPLIEISRSQAAGLAFVLGLAGALWSASGYVGAFGRAMNRIYEIREGRPV 175
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R + L+ + V V LL + + LA
Sbjct: 176 WKLRPLMLLLTLVLVTLAAAVLLALVVTGPVADSVGSALGVGSTLLGVWNIAKWPVIALA 235
Query: 189 LFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P + + + G + ++W + ++ F Y+ FS+Y Y L
Sbjct: 236 VVVMVALLYYATPNVRQPRFRWVSVGAVLAIVTWALVSLAFGFYVANFSSYDKTYGALGG 295
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
++ L+++++ + + GAEL+A +
Sbjct: 296 VIAFLLWVWLTNLALLFGAELDAELER 322
>gi|325571347|ref|ZP_08146847.1| YihY family protein [Enterococcus casseliflavus ATCC 12755]
gi|325155823|gb|EGC68019.1| YihY family protein [Enterococcus casseliflavus ATCC 12755]
Length = 307
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I + + + ++ LLS+FP ++ NL +L TV+ V
Sbjct: 13 LMRFIETTQNRITDSEMGTTSVVVAYYLLLSLFPLMIALGNLLPYLSIDP--NTVLSYVQ 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I I I +L + GL +ISALAA + +S + AL+I++N+A+ V + +
Sbjct: 71 ELIPNQIYDFIGPAIENLLTTSSGGLLSISALAALWSASQSINALQIAMNKAFGVDQRSN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R +SF +LL + +V ++ VF + L +++ F NL+ + T++
Sbjct: 131 FIVVRAVSFVIILLFMIAIVGVTMVFGLGKIILDFLQPIFKFQDNLIDTFQTVKWPVTIV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
AL ++ ++ +P AK K+ S LPG IF I W++ + +F Y F+ Y + S
Sbjct: 191 ALLFIMMLIYWLVPNAKVKLRSTLPGAIFATIGWMLLSQVFGLYARYFAAKIIGYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L + ILG +NA + Y
Sbjct: 251 FIVLMIWLNLAATIIILGGIINAVVEEY 278
>gi|72160655|ref|YP_288312.1| ribonuclease BN [Thermobifida fusca YX]
gi|71914387|gb|AAZ54289.1| ribonuclease BN [Thermobifida fusca YX]
Length = 333
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 62/271 (22%), Positives = 120/271 (44%), Gaps = 5/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + + F E++ +A+ ++ A+LS+FP ++ +L G G T+ D +
Sbjct: 33 WASLKRTVVEFKEDNLTDLAAGLTYYAVLSIFPALLVLVSLLGLAG-QSATDTISDQLSA 91
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + +T + + A A +S A + +S V A + N Y + E R
Sbjct: 92 VAPDETVEIVTGVLTNLQANQATASLVGLLSLALAVWSASAYVAAFMRAANIVYDIREGR 151
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYAT 185
++ T + G LL +TLV +S + V + +A F G + +WN +
Sbjct: 152 PFWKTLPVRVGITLLL-LTLVAISALAVILSGGVAQWVGNFIGAGPTAVTLWNIVKWPVL 210
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + + ++ P K + PG I + W+ + F Y+ F+ Y+ Y L
Sbjct: 211 VLLMMFMVSVLYWAAPNVKRPFRWVSPGGIVAVLIWLGASAAFAFYVANFANYNRTYGSL 270
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A+++ LV+L++ + +LG E NA +
Sbjct: 271 AAVVIFLVWLWISNIAILLGIEYNAEIERSR 301
>gi|323489804|ref|ZP_08095029.1| transport protein [Planococcus donghaensis MPA1U2]
gi|323396542|gb|EGA89363.1| transport protein [Planococcus donghaensis MPA1U2]
Length = 299
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 2/266 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + + + D + + ++ LLS+FP ++F L +L + + +
Sbjct: 28 FLKELFQRIKDVDVPGLGAQLAFFFLLSIFPLLIFLVTLLPYLALSR--GEIFSFLEEVV 85
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + I +++VL GL + LA + +S G+ AL SLN +Y+V E R +
Sbjct: 86 PGTVYVLIESTVIEVLTTQNTGLLSFGILATIWSASLGMNALIKSLNLSYKVAENRPILL 145
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S +L L++ + + + F N L++ + R + +F
Sbjct: 146 ARAMSIILTVLLIFILIVALALPIFGEQLGRLIFSFLGLEANFLVVWNSVRFTIPAIVIF 205
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ P + I+S+L G F W++ + LF+ Y+ F +S Y + +I+
Sbjct: 206 VACAIIYWLAPNVRLNILSVLVGAAFAATGWLLTSYLFSIYVKNFGNFSATYGSIGAIIV 265
Query: 251 CLVFLYMLGVFFILGAELNASMIIYY 276
+++LY+ + ++G ++NA M
Sbjct: 266 LMLWLYVSAMILVIGGQINAVMKERR 291
>gi|15615917|ref|NP_244221.1| hypothetical protein BH3355 [Bacillus halodurans C-125]
gi|10175978|dbj|BAB07074.1| BH3355 [Bacillus halodurans C-125]
Length = 272
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 2/268 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
Y + + ++ ++ +LS+FP I+F L + Q + ++
Sbjct: 6 FFYQFFKQLKTDPIPDWSATLAYYFMLSIFPLIIFILALIPYFSIDQ--QYLYQIIVDYL 63
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE +A T IL V++ P GL + ALAA + +SNG+ AL ++NR Y V E RS Y
Sbjct: 64 PEDLADVFTSVILDVVSRPQGGLVSFGALAAIWTASNGMNALIRAVNRCYAVEETRSLYN 123
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S + + V + V L + + F ++ R + +
Sbjct: 124 LRFLSIMLTIGMMLVFVTTLLLPVFGHLIIQLLDWLFIVPEGTASVLNALRWIVGICLMT 183
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I LI ++L P K+ ++ G + I W + + F+ Y+ F +S Y L ++
Sbjct: 184 IILIVIYLLAPNTSLKLKDVVTGAVVATIGWQLISYGFSAYVSNFGNFSATYGSLGGVIV 243
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ ++ + I+G E+NA+ +
Sbjct: 244 LMLWFFLSSLMLIIGGEVNAATYRLKQQ 271
>gi|257867525|ref|ZP_05647178.1| ribonuclease BN [Enterococcus casseliflavus EC30]
gi|257873854|ref|ZP_05653507.1| ribonuclease BN [Enterococcus casseliflavus EC10]
gi|257877604|ref|ZP_05657257.1| ribonuclease BN [Enterococcus casseliflavus EC20]
gi|257801581|gb|EEV30511.1| ribonuclease BN [Enterococcus casseliflavus EC30]
gi|257808018|gb|EEV36840.1| ribonuclease BN [Enterococcus casseliflavus EC10]
gi|257811770|gb|EEV40590.1| ribonuclease BN [Enterococcus casseliflavus EC20]
Length = 307
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I + + + ++ LLS+FP ++ NL +L TV+ V
Sbjct: 13 LMRFIETTQNRITDSEMGTTSVVVAYYLLLSLFPLMIALGNLLPYLSIDP--NTVLSYVQ 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I I I +L + GL +ISALAA + +S + AL+I++N+A+ V + +
Sbjct: 71 ELIPSQIYDFIGPAIENLLTTSSGGLLSISALAALWSASQSINALQIAMNKAFGVDQRSN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R +SF +LL + +V ++ VF + L +++ F NL+ + T++
Sbjct: 131 FIVVRAVSFVIILLFMIAIVGVTMVFGLGKIILDFLQPIFKFQDNLIDTFQTVKWPVTIV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
AL ++ ++ +P AK K+ S LPG IF I W++ + +F Y F+ Y + S
Sbjct: 191 ALLFIMMLIYWLVPNAKVKLRSTLPGAIFATIGWMLLSQVFGLYARYFAAKIIGYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L + ILG +NA + Y
Sbjct: 251 FIVLMIWLNLAATIIILGGIINAVVEEY 278
>gi|307303467|ref|ZP_07583221.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
gi|306902858|gb|EFN33450.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
Length = 330
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 122/270 (45%), Gaps = 8/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + EE +A+ +S LLS+FP + ++ G + + T + ++
Sbjct: 34 MRDVFWRVFSEIGEERVMLIAAGVSFYLLLSLFPALGALVSIYGLVADPSEIGTHVGILQ 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P I D++ + L F +S + + ++NG+ A ++N AY E
Sbjct: 94 ALLPADSYGLIMDQLETLTTQKPSTLGIGFFVSLSISLWLAANGIAATFDAMNVAYGERE 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L+ + A + V + +P LAYV + L+ R A
Sbjct: 154 KRGFLSRTLLCLAFTFAALLFAVALIAAIGVVPAVLAYVW----VDRWVELVTRAARWPA 209
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + G I ++ F P+ ++K+ + G +F+ + W+ + LF++Y+ F+ Y+ Y
Sbjct: 210 VLLLVTFGTILIYRFGPSRERAKLRWLNWGAVFSTLFWLAASWLFSYYLEHFANYNATYG 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
L ++ + ++++ + I+GA +NA +
Sbjct: 270 ALGALAGLMTWVWISVMILIIGALINAELE 299
>gi|239933081|ref|ZP_04690034.1| ribonuclease BN family membrane protein [Streptomyces ghanaensis
ATCC 14672]
gi|291441431|ref|ZP_06580821.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291344326|gb|EFE71282.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 359
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 116/271 (42%), Gaps = 10/271 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ ++ F +++ A+ ++ +LS+FP ++ +L G V++ + P
Sbjct: 60 LKGSLREFKDDELTDRAAALTYYGVLSLFPALLVLVSLLGV-VGKSATDNVLESLQQLAP 118
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAA----YFSSNGVEALRISLNRAYRVVEMRS 127
+ IT + Q+ + G+ +I A+ + +S V A S N Y + E R
Sbjct: 119 GAVRDIITRAVEQL--EGSAGVGSIVAVVGLVLAVWSASGYVAAFIRSANAVYDMPEGRP 176
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ + G ++ V VI S + V LG+ + +W+ + +
Sbjct: 177 IWKVLPVRVGMTVVLMVLAVISSLIVVFTGGLARRAGDAL-GLGDTAVTVWSIAKWPVLV 235
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + I + ++ P K + I PG + + W++ + F Y+ F++Y+ Y +
Sbjct: 236 VLVTIMIALLYWAAPNTKIRGFRWITPGSLLALVIWLIASAGFAFYVANFASYNKTYGTM 295
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A ++ LV+L++ + +LG E +A +
Sbjct: 296 AGVIVFLVWLWITNLAILLGLEFDAEIARQR 326
>gi|26991244|ref|NP_746669.1| ribonuclease BN, putative [Pseudomonas putida KT2440]
gi|24986297|gb|AAN70133.1|AE016653_4 ribonuclease BN, putative [Pseudomonas putida KT2440]
Length = 318
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ AL S+FPF++F L GFL F +
Sbjct: 11 LHRVLVRTVKEFLDDEMSTYASALAYQALFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVSEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ +S Y + + L+ + + V P + ++ + ++ +W R +
Sbjct: 130 VWKRIPLSIFYTVGLAGMLLAAAALMVLGPQVMEWIAAQI-GMQEFIVTLWTILRWPVII 188
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L + + ++ +P K + I PG + + W+V ++ F +Y+ TF+ Y+ MY +
Sbjct: 189 ILLMVAVALIYYVMPDVKQQFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIG 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+I+ L++ Y+ +LGAE+NA +
Sbjct: 249 AIIVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|110632679|ref|YP_672887.1| putative ribonuclease BN [Mesorhizobium sp. BNC1]
gi|110283663|gb|ABG61722.1| putative ribonuclease BN [Chelativorans sp. BNC1]
Length = 322
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 59/274 (21%), Positives = 123/274 (44%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + E+ +A+ ++ LL++FP + +L G + V I + G
Sbjct: 28 DIGWRVFREIGEDRITLIAAGVTFYLLLALFPALAAFVSLYGLVSDPVTVADHIAYLGGL 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + ++ +++ ++ L F I A + ++NG++AL ++N AY E R
Sbjct: 88 LPPTAIEIVQQQLQALVSERSQSLGLGFLIGLAIALWSANNGIKALFEAMNVAYDETEKR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L+S + L V +++ +P LA + P L+ R +
Sbjct: 148 GFIKLNLLSLSFTLATLVLGIMLIIAVGVVPAVLAILG-LSPWAETLIAF---ARWPTLL 203
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L G++ ++ F P+ + K + G + + W+ +V F++Y+ F+ Y Y L
Sbjct: 204 LVSMFGILMLYRFGPSRERPKWRWLSWGAVIATLVWLAASVAFSYYLQNFADYDATYGSL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+I+ +++ ++ V I+GAE++A + R
Sbjct: 264 GAIIGLMMWTWISVVVLIVGAEIDAEIEHQTARD 297
>gi|284029889|ref|YP_003379820.1| ribonuclease BN [Kribbella flavida DSM 17836]
gi|283809182|gb|ADB31021.1| ribonuclease BN [Kribbella flavida DSM 17836]
Length = 346
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 120/275 (43%), Gaps = 11/275 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I+ A + + +A+ ++ LS+FP + G + + + ++ +
Sbjct: 57 WRIVRRAWKEASTDQVPLLAAGVAFFGFLSLFPAVAAIVLGYGLVAEPSQMRSQVEELTA 116
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A P + ++ + A P +GL I+ A + +S GV L ++N AY E
Sbjct: 117 AVPASARDILLQQVESLAAAPQQGLGIGLVIALATALWSASGGVGYLISAVNLAYDEEET 176
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + +L++ G L A V +++ + + L + + +++ R+
Sbjct: 177 RGFVKRKLLALGLTLGAIVFVLLAAGLLAVGALIDD-------SSTVVRVLLQVARLAVA 229
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + I L V+ P + ++ + G + W++ ++ F+ Y+ TF Y+ Y
Sbjct: 230 IILITIALAVVYRVAPDRDAPRMRWVSVGAAVATVIWLLASIGFSVYVSTFGNYAKTYGS 289
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA++ L++L++ +LGAE+NA R
Sbjct: 290 LAAVAILLLWLWLTAYAILLGAEINAESEQQTVRD 324
>gi|325277884|ref|ZP_08143430.1| ribonuclease BN [Pseudomonas sp. TJI-51]
gi|324096987|gb|EGB95287.1| ribonuclease BN [Pseudomonas sp. TJI-51]
Length = 319
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 124/266 (46%), Gaps = 1/266 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ AL S+FPF++F L GFL F +
Sbjct: 11 LHRVLARTVKEFLDDEMSTYASALAYQALFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R +
Sbjct: 130 VWKRIPLSIFYTVGLAGMLLAAAALMVLGPQVMEWIAAQIGMQEFIVTLWTVLRWPVIVF 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K K I PG + + W++ ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LLMVAVALIYYVMPDVKQKFRFITPGSVLAVVVWIIASLGFAYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
I+ L++ Y+ +LGAE+NA +
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|299535175|ref|ZP_07048499.1| transport protein [Lysinibacillus fusiformis ZC1]
gi|298729296|gb|EFI69847.1| transport protein [Lysinibacillus fusiformis ZC1]
Length = 305
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I D I + A+A+ ++ LLS FP ++F L +L V +
Sbjct: 34 FIQDLIGRLKRVEISALAAQLAYFFLLSFFPLLIFLVTLLPYLNLE--TTQVYSFLVNIL 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + K I + + ++L L +I L + +S G+ AL +LN+AY E R+ +
Sbjct: 92 PDEVYKLIENTLNEILTNRNSSLLSIGVLGTIWSASKGINALLRALNKAYDT-EGRAGIL 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S + + + + + + V ++ + R L +F
Sbjct: 151 DRGLSLVFTIALVIVIAVALLLPVFGQQIGHFLFSIVGIEEQFESVWHRLRWSIPPLLIF 210
Query: 191 IGLIFVHLFLPA--AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I L+ ++ F+P + KIM + PG +F ++W+ F+ YI F+ YS Y + +
Sbjct: 211 IVLMGIYWFVPNTSPRLKIMGVWPGALFATLAWLAVTYGFSFYINNFANYSATYGSIGGV 270
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++LY G+ I G LNA+M +K+
Sbjct: 271 IILMLWLYFTGIILIFGGVLNATMQKRALQKE 302
>gi|297624536|ref|YP_003705970.1| ribonuclease BN [Truepera radiovictrix DSM 17093]
gi|297165716|gb|ADI15427.1| ribonuclease BN [Truepera radiovictrix DSM 17093]
Length = 289
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 123/265 (46%), Gaps = 1/265 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ A F E+D AS ++ L S+FPFI+F L GFL +F +
Sbjct: 12 FAVLRRAFGKFGEDDMGTYASALAYQVLFSLFPFIIFLVALLGFLNIPEFFEYLRGQANE 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +A + ++I+ + P GL ++ L A + +S GV A +LN AY V E R
Sbjct: 72 VLPAQVADQV-NQIIDEIEQPRGGLLSLGILVALWTASAGVRATMNALNVAYGVSEGRPV 130
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +S Y + + L+ + + + P ++++ + + + R+ ++
Sbjct: 131 WKRMPLSLLYTVGLAAMLIAAAALLIFGPQVMSWLGELVGFANIFVTLWNLLRLPVAVVL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + V+ P + + + I PG + + W++ + F+ Y+ F+ +S Y L ++
Sbjct: 191 LMLVVALVYYAFPDTEQRFVFITPGSVLAVLVWLLASWGFSLYVQNFADFSATYGSLGAV 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L + Y+ + GAE+N +
Sbjct: 251 VVILFYFYISASVLLFGAEINEVIE 275
>gi|313497651|gb|ADR59017.1| Putative ribonuclease BN [Pseudomonas putida BIRD-1]
Length = 318
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ AL S+FPF++F L GFL F +
Sbjct: 11 LHRVLVRTVKEFLDDEMSTYASALAYQALFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ +S Y + + L+ + + V P + ++ + ++ +W R +
Sbjct: 130 VWKRIPLSIFYTVGLAGMLLAAAALMVLGPQVMEWIAAQI-GMQEFIVTLWTILRWPVII 188
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L + + ++ +P + + I PG + + W+V ++ F +Y+ TF+ Y+ MY +
Sbjct: 189 ILLMVAVALIYYVMPDVEQQFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIG 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+I+ L++ Y+ +LGAE+NA +
Sbjct: 249 AIIVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|58038914|ref|YP_190878.1| t-RNA-processing ribonuclease BN [Gluconobacter oxydans 621H]
gi|58001328|gb|AAW60222.1| t-RNA-processing ribonuclease BN [Gluconobacter oxydans 621H]
Length = 348
Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 61/286 (21%), Positives = 116/286 (40%), Gaps = 16/286 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I A+ + A LS+FP I +L G Q V ++V+
Sbjct: 54 IAKHLFAEVGSSQTSLSAAGCAFYATLSLFPAISSLISLYGLAFDLQTVEPQLEVLRHLL 113
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I D I ++++ P L S A + +S +++ +LN AY E RS
Sbjct: 114 PPSAYDLIGDRIHELISQPHSSLTIGLIFSLAIALWSASASTKSILSALNMAYNAQETRS 173
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN------------LLL 175
+ + I+ L A + + + VA P + Y+ + L + +
Sbjct: 174 FLKFQAIALSTTLTAILGAALTLALMVAAPALVDYLPRHVSFLSDPPFPVDLLLSYGAPM 233
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ +L +FI + ++ F P ++ I PG I WV+ ++ F+ Y+
Sbjct: 234 VVHTLAPLLMLLFVFIAVTLLYRFAPCRVHTQWRWIFPGSALATILWVITSLGFSWYVAH 293
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
F++Y Y L ++ +++ ++ + GAELNAS+ + +
Sbjct: 294 FASYGATYGPLGAVAAIMMWFFVSAYVVLFGAELNASLEARAGQSQ 339
>gi|308177256|ref|YP_003916662.1| ribonuclease BN-like protein [Arthrobacter arilaitensis Re117]
gi|307744719|emb|CBT75691.1| ribonuclease BN-like protein [Arthrobacter arilaitensis Re117]
Length = 376
Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 114/263 (43%), Gaps = 7/263 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPE 72
+I F + +A+ ++ A+LS+FP ++ +L G G ++ ++ +
Sbjct: 50 RSIREFSRKKCTDLAASLTYFAMLSIFPALLAVVSLLGVAGQAENMTRNILSLIQELASK 109
Query: 73 VIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + I Q+ + P+ GL + L A + +S V A ++N+ Y V E R +Y
Sbjct: 110 EVVETLRQPIEQLASAPSAGLALVAGLLGALWSASGYVGAFGRAMNQIYEVYEGRPFYKL 169
Query: 132 RLISFGYVLLASVTLVIM-SFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLAL 189
R + L+ V + ++ + V+ PLA A LG + IWN + +L
Sbjct: 170 RPLMLALTLVLLVAVSVLGMLLIVSGPLAQAIGN--VLGLGESAVAIWNIAKWPVIVLCA 227
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ P K K + G + V V F Y+ F Y+ Y + +
Sbjct: 228 IVLVAVLYYGAPNVKQPKFRWVSLGSAIALLVLAVATVGFFFYVSNFGNYNKTYGAIGGV 287
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L++L++ + + GA +A
Sbjct: 288 IVLLLWLWIANLSLLFGAVFDAE 310
>gi|229592220|ref|YP_002874339.1| putative ribonuclease [Pseudomonas fluorescens SBW25]
gi|229364086|emb|CAY51687.1| putative ribonuclease [Pseudomonas fluorescens SBW25]
Length = 316
Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 124/266 (46%), Gaps = 1/266 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ FV+++ AS ++ L S+FPF++F L GFL F +
Sbjct: 11 LHKVLVRTVKEFVDDEMPTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFTWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A + +S GV + ++N AY VVE R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVVEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R ++
Sbjct: 130 IWKRFPLSIFYTVGIAGMLLAAAALMVLGPQVMEWLAGQIGMQEFVVTLWTIVRWPLIVI 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + ++ +P + K I PG + + W+V ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LLMFAVALMYYVMPDVEQKFRFITPGSVLAVVVWIVASLGFGYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
I+ L++ Y+ +LGAE+NA +
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|150376885|ref|YP_001313481.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
gi|150031432|gb|ABR63548.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
Length = 330
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 124/270 (45%), Gaps = 8/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + + EE +A+ +S LLS+FP + ++ G + + T + ++
Sbjct: 34 MRDVFWRVVSEIAEERVVLIAAGVSFYLLLSLFPALGALVSIYGLVADPSEIGTHMGILQ 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P+ I D++ + L F IS + + ++NG+ AL ++N AY E
Sbjct: 94 ALLPQDSYGLIMDQLKTLTTQKPSTLGMGFFISLSISLWLAANGIAALFDAMNVAYGERE 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + ++ + A + V + +P LA++ + L+ R A
Sbjct: 154 KRGFLFRTVLCIAFTFAALLFAVALIVAIGVVPAVLAHLW----VDRWVELVTRVARWPA 209
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + G + ++ F P+ ++K+ + G +F+ + W + LF++Y+ F+ Y+ Y
Sbjct: 210 LLLLVTFGTVLIYRFGPSRERAKLRWLNWGAVFSTLFWFAASWLFSYYLEHFANYNATYG 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
L ++ + ++++ + I+GA +NA +
Sbjct: 270 ALGALAGLMTWVWISVMILIIGALINAELE 299
>gi|260428190|ref|ZP_05782169.1| transporter [Citreicella sp. SE45]
gi|260422682|gb|EEX15933.1| transporter [Citreicella sp. SE45]
Length = 313
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 79/274 (28%), Positives = 146/274 (53%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
V+ + + +D + +A +++ ++++FPF++F ++L F+G +I
Sbjct: 34 RAVWAVCREGGLRLWSDDAFGLAGNVAFRVIMAIFPFLIFTSSLTAFIGTDGMAEDLISF 93
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + +PI E+ QV+ V G+ ++ L +F+ GV+ +R+ LNRAY + E
Sbjct: 94 LIAIVPEALIEPIVSEVRQVMTVQRGGVLSLGVLLTIWFALGGVDGIRVGLNRAYGIRET 153
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R WY+ + V++AS+ LV++ ++ V P A +++ FP + + R +
Sbjct: 154 RPWYVLYPLMALMVVIASLVLVLVGYLLVLAPRAGSWLHILFPDFDPASVTVSLVRYPSA 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L L H+ LPA +++ SI PGV+FT +SW+ F+ Y+ F+ Y++ Y GL
Sbjct: 214 ALILIASLFLAHVLLPARRTRFSSIYPGVLFTVVSWIALTAAFSFYLGHFAAYASYYGGL 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A I+ L F+Y+ + I G ELN ++ I +
Sbjct: 274 AGIIAALYFMYLAALVLIFGGELNRAIRIRRLSR 307
>gi|315503112|ref|YP_004081999.1| ribonuclease bn [Micromonospora sp. L5]
gi|315409731|gb|ADU07848.1| ribonuclease BN [Micromonospora sp. L5]
Length = 340
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 103/272 (37%), Gaps = 6/272 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVF 67
++ + + FV ++ A+ ++ +L++FP + L G + + V TVID+
Sbjct: 30 RGVLVRSGKGFVTDNCADWAAALTYYGVLALFPSTIVVVALVGLVSDGPRTVDTVIDLAR 89
Query: 68 GAWPEVIA--KPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + V+ L + L A + +S + A + N Y V
Sbjct: 90 EIGAGSVVGNDAFVGVVRNVVEQQGSAKVLLSFGLLGALWSASGFIGAFTRASNAIYGVR 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R +Y R + G + V L +++ + V A +
Sbjct: 150 EGRPFYRLRPLQIGMAAVTIVLLAVVATGLIVSGPVTDAVGDLLHAGAVARTTWSVAKWP 209
Query: 184 ATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L + P + + + PG ++WV+ + F Y+ F +Y Y
Sbjct: 210 LLAVVAMTLLSLLFWIAPNVRQPRFRWLTPGGALALVAWVLASFGFGLYVANFGSYDVTY 269
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
L +++ LV+LY+ +LG ++NA +
Sbjct: 270 GSLGAVIAFLVWLYLSNCALMLGVQVNAELQR 301
>gi|220924378|ref|YP_002499680.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
gi|219948985|gb|ACL59377.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
Length = 293
Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 106/271 (39%), Positives = 153/271 (56%), Gaps = 1/271 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F+I A + FV DGWA+ASHI+LS L S+FPF++ LA G+
Sbjct: 2 RIRTAFEIAAIAAQRFVAHDGWAIASHIALSLLTSLFPFLILLTALASVFGSKSLADEAS 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+++F WP +A P+ E+ +VL GL T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 62 NLLFEVWPSEVAGPVATEVHRVLTEQRGGLLTVGALLALYFSSSGVESLRVGLNRAYGLR 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E+R W++TRL S GYV+ A+ ++ +F+ V PL + P L L L I R++
Sbjct: 122 EVRPWWLTRLESIGYVICAAFAMLAFTFLVVLGPLMWRGLILVAPGLEPLGLTIAVVRVF 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMY 242
T L + + L+ H F+ A + +LPGV T WV+ + F Y+ FS Y + Y
Sbjct: 182 LTALLIALVLVIAHKFIAAGRRPWHMVLPGVAVTLGMWVLAGLGFGMYLDRFSGAYVSTY 241
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
GLA+ M LVFLY L F+ G E+N ++I
Sbjct: 242 GGLATAMVFLVFLYWLAAMFLFGGEINGTII 272
>gi|315125588|ref|YP_004067591.1| ribonuclease protein [Pseudoalteromonas sp. SM9913]
gi|315014101|gb|ADT67439.1| ribonuclease protein [Pseudoalteromonas sp. SM9913]
Length = 315
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 116/269 (43%), Gaps = 8/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI ++ ++ +A+ ++ ALL++FP I ++ + + + +
Sbjct: 22 WDITRRIVKQMSRDNLSLVAAGVAFYALLAIFPAIAALVSVYAYFTSPNDISVYLSQFMA 81
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ + I ++ + L + L + SS G +AL + N +Y E
Sbjct: 82 LLPQSTQEIILSQVSSLAQKSQTSLSLSALGTLLLTIWSSSKGSQALITACNISYHEYEK 141
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ +L+ + + A V VI + +PLAL + ++ +I
Sbjct: 142 RSFLKAQLVRLLFSVGAIVVAVIALVIIGILPLALNLLGIK----ESIDFLIMLISWPLL 197
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L+ ++ + P K+ K + G + W+V + F+ Y+ F++Y+ Y
Sbjct: 198 ALTFNFALLILYRYAPHRKAAKWRWVTVGSFTATVLWIVASFGFSFYVSHFASYNETYGS 257
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
L ++ L++L++ ILGA +NA++
Sbjct: 258 LGGVVIMLMWLFISAYIIILGATINAALE 286
>gi|116249043|ref|YP_764884.1| ribonuclease domain-containing protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115253693|emb|CAK12086.1| putative transmembrane ribonuclease domain protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 359
Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + D+ + + + +A+ ++ LL++FP + +L G + + +
Sbjct: 60 FSGLRDVFWRVFHEVLADRVTLIAAGVTFYLLLALFPAMAALVSLYGLVADPATISEHLR 119
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYR 121
+ G P + ++I +++ L F + A + + +G A+ ++N AY
Sbjct: 120 ELAGLMPSGAFDLLANQIKELVDRRDATLGITFFVGLGIALWSTHSGTLAIFDAMNVAYE 179
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R LI + L A + V+M + +P+ L+Y+ + + ++
Sbjct: 180 EEEKRGLIRLNLIGLCFTLCAMLLTVVMVALVGVMPVVLSYL--WLDQFKEHMALLLRWP 237
Query: 182 IYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++A+ + V+ F P+ + +K+ + G + T ++W ++ F++Y+ F+ Y+
Sbjct: 238 LLLLVVAVAVTS--VYRFGPSREPAKLRWMTWGAVLTTVAWTAMSLGFSYYLDHFANYNA 295
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y L +++ L+++++ V I+G ELNA +
Sbjct: 296 TYGTLGALIGFLIWIWLSVVILIVGGELNAELE 328
>gi|125974669|ref|YP_001038579.1| putative ribonuclease BN [Clostridium thermocellum ATCC 27405]
gi|256004132|ref|ZP_05429116.1| ribonuclease BN [Clostridium thermocellum DSM 2360]
gi|281418859|ref|ZP_06249878.1| ribonuclease BN [Clostridium thermocellum JW20]
gi|125714894|gb|ABN53386.1| putative ribonuclease BN [Clostridium thermocellum ATCC 27405]
gi|255991880|gb|EEU01978.1| ribonuclease BN [Clostridium thermocellum DSM 2360]
gi|281407943|gb|EFB38202.1| ribonuclease BN [Clostridium thermocellum JW20]
gi|316941794|gb|ADU75828.1| ribonuclease BN [Clostridium thermocellum DSM 1313]
Length = 276
Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 132/266 (49%), Gaps = 2/266 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ +II D ++D A+A+ ++ +L++FPF++F L + ++
Sbjct: 9 LIEIIKDIYTRSRDDDVPALAAQLTYYFILALFPFLIFLITLLSYTPI--TGEEAMNFFA 66
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + D + ++ A P + + +AA + SSNG++A+ +N+AY E R
Sbjct: 67 RILPPLAFNAVLDVVNEITASPRETFLSFGMIAALWASSNGMKAVIRGINKAYDQKETRP 126
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+++ RLIS V++ + T++ + + A + F + R ++
Sbjct: 127 FWMVRLISLVAVIILAFTVIFSLALLLFGETAEKELFYHFRFPNIYRGVCTTVRFLLPVI 186
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F I +++ P+ + + +LPG F+ +SW++ LF+ YI F+ +S MY +
Sbjct: 187 LMFCVFILLYMLTPSRRLSLKEVLPGSAFSALSWILVTTLFSLYINNFADFSKMYGSIGG 246
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
I+ LV+LY + + +LG ELNAS+
Sbjct: 247 IIALLVWLYWISIIIMLGGELNASLA 272
>gi|269929219|ref|YP_003321540.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
gi|269788576|gb|ACZ40718.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
Length = 369
Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 6/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP---TVID 64
+ + + F ++D MA+ + + S+ P ++F A L+G + + V ++
Sbjct: 8 FKAVGKEVVREFSDDDVTGMAAQAAYQIIFSLPPLLIFFAALSGLVARYTGVDVFGQLLS 67
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P + + + + + GL + L A + +S + + NRAY V +
Sbjct: 68 LAEEGLPASVFDTVEIILGGIQEQSSAGLLSFGFLLAIWSASGALNTMISLFNRAYDVDD 127
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIY 183
R + RL++ G + +V ++ +FV ++ + F LG ++WN R
Sbjct: 128 TRGFIKKRLLAIGLTIGLAVLVIGAFVLFVFGQRIGLWIAE-FAGLGEAFTLVWNIVRWP 186
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A ++ + + L ++ PA + I PG +F + W++ F+ Y+ FS + Y
Sbjct: 187 AIVIFMMLALAILYWAGPAIEQTFRWISPGAVFATLLWLLATFGFSLYLR-FSNPGSAYG 245
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++ L FLY+ + +LG E+NA + Y K
Sbjct: 246 ILGGLVVLLFFLYLSSIVLLLGCEVNAVIDKRYDPK 281
>gi|310659169|ref|YP_003936890.1| integral inner membrane protein with ribonuclease fold [Clostridium
sticklandii DSM 519]
gi|308825947|emb|CBH21985.1| putative integral inner membrane protein with ribonuclease fold
[Clostridium sticklandii]
Length = 319
Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++I + + F ++ ++ LLSVFPF++F L GFL V ++I +
Sbjct: 17 LKNLILELPKRFARDNISQTGGQLAYFFLLSVFPFLIFLNALLGFLNIS--VESIIREIS 74
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + + V+ L +I LA+ + +S V++L I+LN AY V R+
Sbjct: 75 AIAPEEIVVLLRGYLESVVETRNTSLLSIGLLASLFSASKAVDSLIIALNTAYDVENKRN 134
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + +S + L+ +VI + + FF ++ + R
Sbjct: 135 FITKKAVSIFFTLILGFAIVISLLLPALGKNVAFLIADFFRISNIIVFVWVYIRWVIVFF 194
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LFI + ++ +P + LPG F SW++ + F Y+ F+ YS +Y + +
Sbjct: 195 ILFITIALLYHIVPYVNQPFKNSLPGTFFAVTSWLLVSYGFGIYVNNFANYSAVYGSIGA 254
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ + +LY+ G+ +LG E+N + YY K
Sbjct: 255 VIALMFWLYLTGIILVLGGEINDILYRYYEATK 287
>gi|56964680|ref|YP_176411.1| hypothetical protein ABC2916 [Bacillus clausii KSM-K16]
gi|56910923|dbj|BAD65450.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 276
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 4/268 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
I + +A+ ++ +LS+FP ++F F + V +++ +P
Sbjct: 11 KKLIAQLKSDPIPDLAATLAFYFILSIFPLMIFVLAGVSFFEINN--DEVQNLINAYFPG 68
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + +L + P GL +I L + +SNG+ A S+NRAY + E R + R
Sbjct: 69 EIGDTFSRIVLNTIGEPQAGLLSIGILGTLWSASNGINAFIRSVNRAYNIEETRHFLKLR 128
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I+ G + + ++I + V L + F ++ ++ N R A + +
Sbjct: 129 SIAIGLTVGMVLLIIITLALPVFGNQILNLLEAFLLLPTEVVAMLDNFRWIAAFAIMIVA 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L+ ++ P AK + L G IF I W + + F+ Y+ ++ Y + Y LA ++ +
Sbjct: 189 LMALYWIAPNAKQRFRDGLIGAIFATIGWQLISFFFSLYVSNYANYESTYGPLAGVIILM 248
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKK 280
+ ++ G+ I+GAE+NA++ ++ RKK
Sbjct: 249 FWFFLTGIILIVGAEINATL--HHLRKK 274
>gi|23097645|ref|NP_691111.1| hypothetical protein OB0190 [Oceanobacillus iheyensis HTE831]
gi|22775868|dbj|BAC12146.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 282
Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 5/265 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
I F +D +A+ ++ LLSVFP +V + + I + PE +
Sbjct: 10 FITKFKNDDVPLLAASLAYYFLLSVFPLLVVAFAIIPYFNISP--QDAIQFISSILPEQL 67
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + I+ ++ P GL TI L + +SNG+ A N +Y V E RS+ TR I
Sbjct: 68 ASTFQENIVSIVETPRGGLLTIGILGTLWSASNGINAFIKVSNESYEVEETRSFIKTRAI 127
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+FG + ++ + V + L + I+ R ++ + + L+
Sbjct: 128 AFGLTIAMIFAVITAIILPVFGDVILTMAMSIVGINESTEWILQISRFAISIAVITLLLL 187
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F P AK + I+PG + I W++ + F+ Y+ F YS MY L ++ +++
Sbjct: 188 TLYRFAPNAKLPVKHIIPGTLTASILWLIISFGFSIYVSNFGNYSNMYGSLGGVIILMIW 247
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
++ G+ ++G +N ++Y+ +K
Sbjct: 248 FFLTGMILLIGGIIN---VMYHQKK 269
>gi|238063813|ref|ZP_04608522.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
gi|237885624|gb|EEP74452.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
Length = 340
Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 108/272 (39%), Gaps = 6/272 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVF 67
++ + +FV+++ A+ ++ +L++FP + L G + + V TVID+
Sbjct: 45 RGVLLRSGRNFVKDNCADWAAALTYYGVLALFPSAIVVVALVGLVSDGERTVDTVIDLAR 104
Query: 68 GAWPEVIA--KPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + V+ + L + L A + +S + A + N Y V
Sbjct: 105 EVGAGSVVGNDGFVSAVRGVVDQQSGTKALLSFGLLGALWSASGFIGAFTRASNAIYGVQ 164
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + R + G + V L +++ + V + A G + +
Sbjct: 165 EGRPVWKLRPLQIGLAAVTLVLLAVVATGLIVSGPVTDAVGELVGAGGLARTVWGVAKWP 224
Query: 184 ATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + L + P + + + PG +SW + + F Y+ F +Y Y
Sbjct: 225 VLAMVMMVLLSLLFWIAPNVRQPRFRWLTPGGAVALVSWALASFGFGLYVANFGSYDVTY 284
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
L +++ LV+LY+ +LG ++NA +
Sbjct: 285 GSLGAVIAFLVWLYLSNSALMLGVQINAELQR 316
>gi|225573600|ref|ZP_03782355.1| hypothetical protein RUMHYD_01794 [Blautia hydrogenotrophica DSM
10507]
gi|225039039|gb|EEG49285.1| hypothetical protein RUMHYD_01794 [Blautia hydrogenotrophica DSM
10507]
Length = 323
Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 3/278 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ V + I ++ A A+ + +LS PF++F L +
Sbjct: 1 MKKKLGPVLSSLSGFIRRTQKDHVGAYAAQAAYFIILSFIPFMLFLMTLVQYTPL--TYN 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + P I + + +V + + + ++ + A + + G++AL LN Y
Sbjct: 59 AVRSAIVSFLPREIQSFVLGIVAEVFS-KSGAVLPVTLVTAIWSAGKGIQALTNGLNTIY 117
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E R+W TRL S Y +L L+ + V + ++ P LG ++
Sbjct: 118 HVKETRNWLTTRLWSMLYTVLFVFALIGSLILLVFGNSIQQTLMRYVPFLGEMVARFLGA 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + L + +F++ LP ++ + S +PG + T I+W V + F+ Y F +S
Sbjct: 178 KNFLVFIVLVLLFLFLYKALPNRRASLKSQVPGAVLTAIAWSVFSFGFSIYFTFFPNFSN 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
MY L +I+ ++++Y+ + GAE+NA + + +
Sbjct: 238 MYGSLTTIILIMLWMYICMNIVLFGAEINAYYEMEFRQ 275
>gi|226945350|ref|YP_002800423.1| Ribonuclease BN protein [Azotobacter vinelandii DJ]
gi|226720277|gb|ACO79448.1| Ribonuclease BN protein [Azotobacter vinelandii DJ]
Length = 289
Score = 195 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 126/273 (46%), Gaps = 3/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ A++ F++++ AS ++ L S+FPF++F L GFL +F +
Sbjct: 13 EVLKCAVKDFMDDEMPTYASALAFQMLFSLFPFLLFLIALIGFLDLQKFFDWLQQQAALL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I Q GLF++ +AA + +S GV + ++N+AY V E R +
Sbjct: 73 LPAQAMDTVNSVIAQ-FQQERAGLFSLGIVAALWTASAGVRSTMQAMNKAYDVAESRPAW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+S Y + ++ L+ + + + P + ++ + L L++ +W R +L
Sbjct: 132 KRIPLSVLYTVGIALMLLSAAGLMLIGPEVMTWLAGWV-GLEQLIVTLWTWLRWPVAILL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ P + + I PG + + W+ ++ F Y+ F Y Y + +I
Sbjct: 191 LILVVAVIYYVAPDVEQRFRFITPGSVLAVLVWIATSLGFGFYVGNFGNYDATYGSVGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ L++ ++ + GAELNA + + K
Sbjct: 251 IVMLLYFFISAAVLLFGAELNAVIEHRHPEGKD 283
>gi|297204551|ref|ZP_06921948.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197710614|gb|EDY54648.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 353
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 114/270 (42%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ ++ F ++ A+ ++ +L++FP ++ +L G + H V+D +
Sbjct: 54 ILKGTLKEFKRDELTDRAAALTYYGILALFPALLALISLLG-IAGHSATQKVLDNIQKLA 112
Query: 71 PEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P ++ + Q+ G + + A + +S V A S N Y V E R
Sbjct: 113 PGAARDVLSSAVKQMQGNAGIGSIMAIVGLVLAVWSASGYVAAFIRSANAVYDVPEGRPV 172
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + G ++ + VI + + V + +G+ L +W+ + +L
Sbjct: 173 WKVLPVRVGVTVVLLILAVISALIVVFTGSLAQQLGTTL-GIGDTFLTVWSIAKWPVLVL 231
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ P AK + I PG + + W++ + F Y+ F++Y+ Y A
Sbjct: 232 LVTTMIAILYWATPNAKVRGFRWITPGSLLALVIWMIVSAGFALYVANFASYNKTYGTFA 291
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A M
Sbjct: 292 GVIIFLVWLWITNLAILLGLEFDAEMHRQR 321
>gi|254465241|ref|ZP_05078652.1| ribonuclease BN [Rhodobacterales bacterium Y4I]
gi|206686149|gb|EDZ46631.1| ribonuclease BN [Rhodobacterales bacterium Y4I]
Length = 315
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 117/271 (43%), Gaps = 10/271 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + + +A+ ++ L+++FP I + G + + I + G
Sbjct: 20 DIALRVKDEIAADHVGLIAAGVAFYGLMALFPAITALLAIGGLMVEPAQIVDQISQLEGV 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + + I + QV GL L A Y +S G+ +L +N AY E R
Sbjct: 80 VPDEVMEIIIGQATQVAGSREGGLGLAAVAGILIALYSASKGMNSLIEGMNVAYDEEEKR 139
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+++ ++ L L++ +A+P +A V G ++ + + +
Sbjct: 140 GFFMKTFVTLVLTLFLIAGLLMGLLAALAVPSVIALVDA-----GPVIEALGTLLAWGVL 194
Query: 187 LALFIG-LIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + + L ++ + P+ K +++ PG + W+ G+ F Y+ F +Y+ +
Sbjct: 195 LVMTMAGLAVLYRYGPSRDKPELLWTSPGAAAACVLWLAGSAGFAFYVGNFGSYNESFGA 254
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA ++ L++L++ +LGAE+NA +
Sbjct: 255 LAGVVVLLMWLWISAFIVLLGAEINAEVEAQ 285
>gi|331696161|ref|YP_004332400.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
gi|326950850|gb|AEA24547.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
Length = 350
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 115/275 (41%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + A ++ +A ++ A L++FP ++ + G + V +D +
Sbjct: 49 WQVTRRAWAEAKADNVPILAGGVAFFAFLALFPALIAAITVYGLVADPAQVGDQVDRLAA 108
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + D++ V + L +S LAA + +S G L + N AY E
Sbjct: 109 ILPAAARPIVADQLGAVSSAGTGALGVGLVVSLLAALWSASAGTMNLIRATNLAYDEEET 168
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + R + G L A V +++ + A+P V L ++ R
Sbjct: 169 RGFLRLRGTALGLTLAAIVFVLLAVALVAAMPAVFEAVGLGGAGL----VVAQVVRWVLL 224
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + L V+ P + K + G + + W+VG+++F+ Y+ F +Y+ Y
Sbjct: 225 VVLVVVALAVVYRVAPDRDAPKFRWVSVGAVVATVLWLVGSIVFSVYVDNFGSYNKTYGA 284
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA + L++LY+ +LGAE+NA R
Sbjct: 285 LAGAVVLLLWLYLTSYIVLLGAEINAESERQTARD 319
>gi|170747781|ref|YP_001754041.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170654303|gb|ACB23358.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 406
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 117/268 (43%), Gaps = 9/268 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI A E +A+ ++ LL++FP + + G + + + + G
Sbjct: 113 DIALRAYHDVGENRLSLIAAGVTFFTLLAIFPAVAALVSCYGLVADASTINDQLASLQGI 172
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + + D++ ++ L IS + + ++ GV+ + +LN Y E R
Sbjct: 173 LPQGALEIVGDQVKRLNEQGNTTLGFSLLISIALSVWSANGGVKHVFDALNLVYNEREKR 232
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ + L+S + A + + + + V F LG + R +
Sbjct: 233 NFLVLNLVSLAFTAGAL-----LFLLLALAAVVVVPVVLDFVGLGADAWWLALLRWPVLL 287
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+A+ +GL ++ + P+ + + + PG + W+V ++LF+ Y+ F +Y+ Y L
Sbjct: 288 VAVLLGLALLYRYGPSRDAPRWRWVTPGGALAALLWIVASLLFSWYVAHFGSYNKTYGSL 347
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + ++++ + + GA++NA M
Sbjct: 348 GAAIGFMTWIWLSTMIVLTGAQVNAEME 375
>gi|116494587|ref|YP_806321.1| ribonuclease BN-like family protein [Lactobacillus casei ATCC 334]
gi|191638025|ref|YP_001987191.1| YihY family protein [Lactobacillus casei BL23]
gi|301066135|ref|YP_003788158.1| ribonuclease BN-like family enzyme [Lactobacillus casei str. Zhang]
gi|116104737|gb|ABJ69879.1| Ribonuclease BN-like family enzyme [Lactobacillus casei ATCC 334]
gi|190712327|emb|CAQ66333.1| YihY family protein [Lactobacillus casei BL23]
gi|300438542|gb|ADK18308.1| Ribonuclease BN-like family enzyme [Lactobacillus casei str. Zhang]
gi|327382107|gb|AEA53583.1| Methionine aminopeptidase Map [Lactobacillus casei LC2W]
gi|327385249|gb|AEA56723.1| Methionine aminopeptidase Map [Lactobacillus casei BD-II]
Length = 335
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ AI E + A+ ++ LLS+FP I+F AN + G + + A
Sbjct: 42 FVKLAINRITESNIGQSAAALAYYTLLSLFPLILFVANALPYFGL--TYKGLAAYLTQAI 99
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + I +L + GL I A+A + +S GV L++ N+ Y V +++ I
Sbjct: 100 PSNVMNWLDPVIANLLDSSSGGLLGIGAVATLWAASLGVNGLKMGFNQIYGVESSQNFII 159
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL+S + + + VF L ++ + L R T+ ALF
Sbjct: 160 QRLLSMLMTFTLIIVMGAILIVFAFGRQFLEWLIPLLRLNDDWLRTFNTLRWPVTITALF 219
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++F++ FLP K ++ ++LPG FT W++ A F+ Y+ F T Y + + +
Sbjct: 220 VIIMFLNYFLPNVKIRMWTVLPGTAFTVAGWLLIAQAFSLYMKYFGTRYLSYGTIGTFIA 279
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++L + + GA +NA Y+ +
Sbjct: 280 IMLWLNFSALVLLWGAVINALTAEYFIGR 308
>gi|295690772|ref|YP_003594465.1| ribonuclease BN [Caulobacter segnis ATCC 21756]
gi|295432675|gb|ADG11847.1| ribonuclease BN [Caulobacter segnis ATCC 21756]
Length = 403
Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats.
Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 9/269 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI++ + A+A ++ LL++ P I +L G + V + + G
Sbjct: 83 RDIVWRTWREITVDRLPAVAGGVTFYTLLALIPAIGAFVSLYGLFADVRTVEQQLRDMAG 142
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+P + + + +++L++ + L F S L + + ++ + L LN AY E
Sbjct: 143 VFPPSVVQIVGEQMLRLASQGEAKLGLAFAFSLLLSVWSANASMRTLFDGLNIAYDEEEK 202
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R L+S+ + A V V +S V + PL L R L L R
Sbjct: 203 RHIVRRTLLSYAFTFCALVYAVAVSAVLIVTPLLLKAAR-----LSALDSYWAPIRWLMV 257
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
M + ++ F P+ +++ + G W++G++ F+ Y+ + + Y
Sbjct: 258 MAMTAVAFAVLYRFAPSRAQARWRWVWIGAATASGGWLIGSLGFSTYVNRVAHFDAAYGP 317
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
L +I+ +V+++ + ++GAELNA +
Sbjct: 318 LGAIIAFMVWVWFSIMAILVGAELNAEIE 346
>gi|119961246|ref|YP_949390.1| YihY family protein [Arthrobacter aurescens TC1]
gi|119948105|gb|ABM07016.1| YihY family protein [Arthrobacter aurescens TC1]
Length = 359
Score = 195 bits (495), Expect = 9e-48, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 116/269 (43%), Gaps = 7/269 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
I + F ++ A+ ++ A+L++FP ++ +L G G + ++D+V
Sbjct: 40 IAKRTLREFTKDQCPDAAAGLTYYAVLALFPALLALVSLIGIFGDAGKTTGALLDIVQQF 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + I ++ A G + L A + +S A ++NR Y V E R +
Sbjct: 100 APGPGVDAMRQPIEELTQSNAAGFALILGILVALWSASGYTTAFSRAMNRVYEVDEGRGF 159
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVA-IPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
R +++ V +++ + V P+A A + L +WN + +
Sbjct: 160 VKLRGTMLAVTVVSVVGAALVAGMLVLSGPVAEAVGGAI--GMSETFLTVWNIAKWPILI 217
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + ++ F P K K + G + + + + ++ F Y+ FS Y+ Y L
Sbjct: 218 IIVVAIIAVLYYFTPNVKQPKFRWMSMGSLIALVIFALASLGFGFYVANFSNYNKTYGAL 277
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A ++ L++L++L + + GAE +A M
Sbjct: 278 AGVIIMLLWLWILNMSLLFGAEFDAEMER 306
>gi|163745909|ref|ZP_02153268.1| hypothetical protein OIHEL45_09993 [Oceanibulbus indolifex HEL-45]
gi|161380654|gb|EDQ05064.1| hypothetical protein OIHEL45_09993 [Oceanibulbus indolifex HEL-45]
Length = 311
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 83/259 (32%), Positives = 146/259 (56%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++++A+ +D + MA +++ ALL++FPF++F ++L + G +I +
Sbjct: 39 VLHEAVLRLWSDDAFGMAGNVAFRALLAIFPFLIFTSSLTAYFGDRSMADDLIHFLIAIV 98
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + +P+ E+ +V+ VP L ++ L +F+ GV+ +RI LNRAY + E RS +
Sbjct: 99 PPALIEPLVTEVEKVMTVPRGDLLSVGILLTVWFAVGGVDGVRIGLNRAYGLRETRSVFT 158
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ VLLAS+ LVI+ ++ V P A +++ P + + R + L
Sbjct: 159 IYAVQVVMVLLASLILVIVGYLLVLAPRAGSWLHMLMPGFDPGSVTVGLIRFPVSATILL 218
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L H+ LPA ++K +I PGV+ T I+W + A+LF+ Y+ +F+TYS+ YAG+A I+
Sbjct: 219 VALFAAHVILPARRTKFNNIWPGVVATAIAWTLLAMLFSTYLRSFATYSSYYAGMAGIIA 278
Query: 251 CLVFLYMLGVFFILGAELN 269
L F+Y+ + I G ELN
Sbjct: 279 ALYFMYLAALVLIFGGELN 297
>gi|154252348|ref|YP_001413172.1| putative ribonuclease BN [Parvibaculum lavamentivorans DS-1]
gi|154156298|gb|ABS63515.1| putative ribonuclease BN [Parvibaculum lavamentivorans DS-1]
Length = 322
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 124/275 (45%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D+ E+ +A+ +S LL++FP + ++ GF+ + + I + G
Sbjct: 28 RDVALRVWAKINEDSVMLVAAGVSFYILLALFPALAAFVSIYGFVADPKTIADHIAFLGG 87
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEM 125
P + I ++ +L L L A + ++N V+AL ++N AY E
Sbjct: 88 FLPTDGLELIRAQLDGLLRQKPNSLGLGFLLGLGVALWSANNSVKALFEAMNVAYEEEEK 147
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ L+SF + L A V+ +P ALA +R +I GR
Sbjct: 148 RSFVKRHLVSFSFTLGAIAIGVLFLLTVGIVPAALAVLR----IESWAETLIRLGRWPVM 203
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++A+ I + ++ + P+ +K+ + G + W+ +V F++Y+ F+ Y+ Y
Sbjct: 204 LIAVGIAISLIYRYGPSREHAKLRWLSWGAALATLVWIAASVGFSYYLENFANYNATYGA 263
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ +++ ++ + ++GAE+NA M R
Sbjct: 264 LGAVIGLMMWTWISVMIILIGAEINAEMEHQTARD 298
>gi|332531931|ref|ZP_08407815.1| ribonuclease BN [Pseudoalteromonas haloplanktis ANT/505]
gi|332038558|gb|EGI75001.1| ribonuclease BN [Pseudoalteromonas haloplanktis ANT/505]
Length = 317
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 120/275 (43%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI+ + E++ +A+ ++ ALL++FP I ++ + + + + +
Sbjct: 22 WDIVKRIFKQMSEDNLSIVAAGVAFYALLAIFPAIAAMVSVYAYFSSPADISDHLSKIVT 81
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEM 125
P ++ I ++ + + L + + + SS G +AL + N +YR E
Sbjct: 82 LLPPSTSELILSQVSSLAKTSSASLSLSAIGTLILTIWSSSKGSQALITACNISYREYEK 141
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS++ +L+ F + + A V + + +P+ L V ++ L+I
Sbjct: 142 RSFFQAQLVRFLFSVGAIVVAIFALLIIGILPIVLNLVGLK----ESIDLLIKLISWPLL 197
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L+ ++ + P K +K I G + W++ ++ F+ Y+ FS+Y+ Y
Sbjct: 198 AFTFNFALVLLYRYAPHRKPAKWRWITMGSSIATVLWILASIGFSFYVSRFSSYNETYGS 257
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++ L++LY+ LGA +NA+ +
Sbjct: 258 LGGVVIMLMWLYISAYIITLGAVINAATEQQTGKD 292
>gi|89054551|ref|YP_510002.1| ribonuclease BN, putative [Jannaschia sp. CCS1]
gi|88864100|gb|ABD54977.1| ribonuclease BN putative [Jannaschia sp. CCS1]
Length = 318
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 126/275 (45%), Gaps = 10/275 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + + + +A+ ++ LL++FP I ++G L + + + G
Sbjct: 20 DVAFRLKDEVANDRVGLIAAGVAFYGLLALFPAITAVMAISGLLIEPNAIVDQLSRLGGL 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + +TD+ V GL L A Y +S G+ +L +N AY E R
Sbjct: 80 LPQEVIAIVTDQATAVAGSREGGLGLAAIFGVLVAFYSASKGMASLMQGVNVAYDEDEER 139
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +L++FG LL V L++ +A+P LA++ LG ++ + ++ +
Sbjct: 140 GFIRLKLVTFGLTLLLIVGLLVSLGAMLALPAVLAFID-----LGPMVEALLTAALWVGL 194
Query: 187 LALFI-GLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+AL I GL ++ + P+ ++ + G + + W+V + F Y+ F +Y+ +
Sbjct: 195 IALTIFGLSVLYRYAPSRENAEWKWVSLGAVVGCVVWIVASAGFAFYVANFGSYNESFGT 254
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++ L++ ++ +LGAELNA + R
Sbjct: 255 LGGVVVLLMWFWISAFIILLGAELNAELEAQTRRD 289
>gi|311113876|ref|YP_003985098.1| tRNA processing ribonuclease BN [Rothia dentocariosa ATCC 17931]
gi|310945370|gb|ADP41664.1| tRNA processing ribonuclease BN [Rothia dentocariosa ATCC 17931]
Length = 431
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV-IDVVFGA 69
I A F G +A+ ++ +LS FP ++ +L G G + V ++ +
Sbjct: 28 IFRRAGFSFGAHGGTDLAAALTYFTVLSAFPALLAILSLLGIFGQGEDSAKVILEFLQER 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ + + I Q+ G I L+A + +S V + +LN Y V E R
Sbjct: 88 APQQMYSILEGPIHQLTNGQGAGFALIIGILSALWSASGYVGSFGRALNNVYGVREGRPG 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG-NLLLIIW-NGRIYATM 186
+ + + V +V+M +F+ L + + P + L+ ++W NGR +
Sbjct: 148 WFLKPYNVLITTGVIVLVVLMMLMFLLGASVLDWAAPYMPGVDIELIKVLWLNGRWVLIL 207
Query: 187 LALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + ++ P + KI PG + +G + FT Y FS Y+ Y +
Sbjct: 208 ILAVFLIAMLYTATPNVRRLKIRWTSPGAVIALFGMGLGGLGFTIYTNNFSKYNATYGLI 267
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ LVFL+++ + GA ++A
Sbjct: 268 GGVIVMLVFLWIMNNMLVFGAHVDAEFERMRQ 299
>gi|209546746|ref|YP_002278664.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209537990|gb|ACI57924.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 359
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 126/276 (45%), Gaps = 8/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + + + +A+ ++ LL++FP + +L G + + + +
Sbjct: 63 LRDVFWRVYHEVLNDRVTLIAAGVTFYLLLALFPAMAALVSLYGLVADPVTISEHLRELA 122
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
G P + D+I ++++ L F + A + + +G A+ ++N AY E
Sbjct: 123 GLLPPGAFDLLADQIKELVSKRESALGITFFVGLGIALWSTHSGTLAIFDAMNVAYEENE 182
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R L+ + L A + V+M + +P+ L+Y+ + + ++ +
Sbjct: 183 KRGLIRLNLVGLCFTLSAMLLTVVMVALVGVMPVVLSYL--WLDQFKEHMALLLRWPLLL 240
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++A+ + V+ F P+ + +K+ + G T ++W ++ F+ Y+ F+ Y+ Y
Sbjct: 241 LVVAVAVTS--VYRFGPSREPAKLRWMTWGAALTTVAWAAMSLGFSFYLDHFANYNATYG 298
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ L+++++ V ++GAELNA + R
Sbjct: 299 TLGALIGFLIWIWLSVVILVIGAELNAELEHQTARD 334
>gi|116334154|ref|YP_795681.1| ribonuclease BN-like family protein [Lactobacillus brevis ATCC 367]
gi|116099501|gb|ABJ64650.1| Ribonuclease BN-like family enzyme [Lactobacillus brevis ATCC 367]
Length = 303
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 58/272 (21%), Positives = 124/272 (45%), Gaps = 2/272 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + +I +H+ + A ++ LLS+FP ++ A+L +L T
Sbjct: 6 RKRASQIKHVIQTISKHYQMANVSDSAVVLAYYTLLSLFPALLVIASLLPYLNIQ--TET 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++ + PE I + I L + G+ +I + A + SS V A + ++N AY
Sbjct: 64 VLESIEPMVPESIFSMLKPIIHSFLNTRSGGVLSIGVIVALWSSSRAVAAFQRTVNGAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ + R+++F +++ L ++ F + L + + ++ I +
Sbjct: 124 VAKNQNALVNRIVAFFWMVALIAFLFVLMLFFSFGQIILEQLAPYLHVPHEIIGYINAAK 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T L + + L+ + F+P+AK K + PG + + W++ + F+ Y+ F
Sbjct: 184 WPVTFLVVLLVLMILLYFVPSAKLKWRFVWPGALTATVGWLLLSQAFSLYVKYFVHNMDS 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + + + + +L G+ + GA LNA++
Sbjct: 244 YRTIGTFIVLMFWLDFTGLILMFGAVLNAAIQ 275
>gi|54023610|ref|YP_117852.1| putative ribonuclease [Nocardia farcinica IFM 10152]
gi|54015118|dbj|BAD56488.1| putative ribonuclease [Nocardia farcinica IFM 10152]
Length = 326
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 110/276 (39%), Gaps = 6/276 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ + F ++ A+ ++ ++LSVFP I+ L G L ++ +
Sbjct: 28 WGVLRRTVTEFRADNVTDWAAALTYYSVLSVFPGIIVLTALLGALS-PTATDELVTSIRE 86
Query: 69 AWPEVIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + D I ++ + + A + +S + A + N Y V E R
Sbjct: 87 IGPGSGTQLLVDAIEELRGASSLAGPMALFGVATALWTASGYIGAFMRAANAIYEVEEGR 146
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYAT 185
+ T + G V + + + VA V + LG + +W +
Sbjct: 147 PLWKTVPVRVGLTAAMVVLIAVTAVGVVATGGIARRVGDWL-GLGPTAVAVWEVAKWPVL 205
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + ++ P A+ + PG + + WV+ + F Y+ F +Y+ +Y
Sbjct: 206 AVLVSLAFALLYWVAPNARQPGFRWLSPGSVLAVLVWVLASAGFAFYVANFGSYNKVYGS 265
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L + LV++++ V +LGAE +A + ++
Sbjct: 266 LGGVAVFLVWVWISNVAVLLGAEFDAELARGRRIEQ 301
>gi|197105285|ref|YP_002130662.1| hypothetical protein PHZ_c1822 [Phenylobacterium zucineum HLK1]
gi|196478705|gb|ACG78233.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 367
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 116/274 (42%), Gaps = 10/274 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ A++ F ++ +A+ ++ LL++FP + L G + +
Sbjct: 76 DILIRAVKEFADDQAPLVAAGVTFYTLLALFPALGALVALYGLFADVAQAREHLAALSAV 135
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + ++++++ A GL F L + + ++ +A+ ++N AY E R
Sbjct: 136 LPADAVRFLGEQMVRISASNEGGLSLAFAGGLLLSIWSANGATKAMITAMNIAYDEDEKR 195
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L S + L +M + +A + F ++ W +
Sbjct: 196 SFVAKTLTSLAFTLGF-----LMFGLAALAVIAAPAAVEPFAGPAAAAMMRW-ITWPILV 249
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
AL +GL ++ F P+ + + I G I W+ + F+ Y+ F+ Y Y L
Sbjct: 250 AALGLGLALLYRFGPSRDRVRWRWISWGSAAALILWLAVSAAFSIYVANFADYEKTYGSL 309
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ L++LY+ +LGAELN+ + +
Sbjct: 310 GAVIGFLMWLYLSAQVVLLGAELNSEIEHQTVKD 343
>gi|163869287|ref|YP_001610543.1| ribonuclease RNAse BN transmembrane protein [Bartonella tribocorum
CIP 105476]
gi|161018990|emb|CAK02548.1| ribonuclease RNAse bn transmembrane protein [Bartonella tribocorum
CIP 105476]
Length = 283
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 111/276 (40%), Positives = 169/276 (61%), Gaps = 1/276 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F + I DAI H+ + G A ASH++LS LL+ FPF +FG A FLGA + P
Sbjct: 2 LKNIFWYSYRIFGDAISHYWRDSGSAFASHVALSGLLAFFPFFIFGTFFARFLGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ EI+ VL + G+ T+S + AYF+SNG+EALR +LN+AY
Sbjct: 62 QKIKALVQLLPDVIAEPLSQEIVNVLTLHQGGVLTLSIIGTAYFASNGIEALRTALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RSW+ R S +V+L + LV+MSF+ + PL + ++ + + +I
Sbjct: 122 RVTDRRSWFFCRFQSLFFVILGAFGLVVMSFLLILAPLLIKIMQNHPFFMTEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ LFI L+ VH +LPA + K + ILPG++ T W + ++ F Y+ F Y +
Sbjct: 182 RYTIAVVILFISLLIVHKWLPAGQRKFIDILPGIVVTMFVWFMASLAFAQYLTMFD-YIS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
YAGLASIM ++FLY+L FILG E+NA+++ Y
Sbjct: 241 TYAGLASIMVAIIFLYILSAIFILGGEINAAIMFYR 276
>gi|254520560|ref|ZP_05132616.1| YihY family protein [Clostridium sp. 7_2_43FAA]
gi|226914309|gb|EEH99510.1| YihY family protein [Clostridium sp. 7_2_43FAA]
Length = 280
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 130/275 (47%), Gaps = 2/275 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+E V D I I +D +A+ + ++ +L+ FPF++F L GF +
Sbjct: 6 KENKRSVIDSIIYFIVKINNDDIFALGAQLAYYLILAFFPFLIFLLTLIGFSRLNS--AD 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++D + P + + +++++ GL S + + + +S+G A+ +N+AY
Sbjct: 64 ILDGLRTILPNNVFTLVDTTVVEIVDTQNAGLLGASIVLSMWSASSGFRAVIKGVNKAYD 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ E RS+ I+ + L ++ +++ + V + Y+ FP L I R
Sbjct: 124 IREHRSFIKRAFIAIFFTLALALIIMLTLAMLVFGEIIGKYLISVFPFQNILRNIWNISR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+LA+ ++ + PA K + PG I + + W+V ++ F++YI + YS +
Sbjct: 184 YIVVILAMIWIFACIYRYTPARKIPWKEVFPGAIVSTLGWIVVSLAFSYYINNIANYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y + ++ + +LY+ + ILGAE+N+ + I
Sbjct: 244 YGSVGAVFILMTWLYITSMILILGAEINSVLSIRK 278
>gi|217979693|ref|YP_002363840.1| ribonuclease BN [Methylocella silvestris BL2]
gi|217505069|gb|ACK52478.1| ribonuclease BN [Methylocella silvestris BL2]
Length = 360
Score = 193 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 109/274 (39%), Gaps = 9/274 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F + +A+ ++ LL++FP + +L GF V ID++ G
Sbjct: 87 VLQRTWRGFNTDRILLVAAGVTFYLLLAIFPAVSALVSLYGFFADRSGVGAQIDLLVGLL 146
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + DE ++ L F + + ++ G++ L ++N Y E RS
Sbjct: 147 PAGGLDLLRDEATRIATSGQSTLSAVFLFGLAVSIWSANAGMKGLFEAMNVVYEEQENRS 206
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ S + A + + V +P+ L YV I+ R
Sbjct: 207 FIRLNAWSLAFTFGALLFALAALGAIVLVPIILDYVGLERSG----AAILSLARWPLLFF 262
Query: 188 ALFIGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + L ++ + P+ I G W+V ++LF+ Y+ F +Y+ Y L
Sbjct: 263 SLVLALAILYRYGPSRNPAPSWRWITWGSAAASALWLVASILFSWYVANFGSYNATYGSL 322
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + ++++ ++G ELN+ + RK
Sbjct: 323 GAAIGFMTWIWISITVVLVGGELNSQIERQAGRK 356
>gi|114705037|ref|ZP_01437945.1| Ribonuclease BN family protein [Fulvimarina pelagi HTCC2506]
gi|114539822|gb|EAU42942.1| Ribonuclease BN family protein [Fulvimarina pelagi HTCC2506]
Length = 321
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 8/268 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ + F E +A+ I+ LL++FP I + G + Q + + + G
Sbjct: 25 DVLMRVKDRFDEHSVTLVAAGITFYILLALFPAITALVAIYGLVADPQTIQAQLSNLEGI 84
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I ++ ++ + L F +S L + Y S+ GV+AL ++N AY+ + R
Sbjct: 85 VPAGALGIIHSQLERLTSQTESSLSIAFAVSILLSIYSSTKGVKALFKAMNIAYQEKDER 144
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ LIS +V+ + V +++ V IP L+ P + +++
Sbjct: 145 GFIKQNLISMAFVVASIVLVILAIVTLVVIPSVLS----LLPLPAGVTILVLVVPPLVLA 200
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + F P +S + PG + T + WV+ ++ F+ Y + Y +
Sbjct: 201 LLAMAWIAGLFRFGPHRRSPTFKWLTPGAVLTILGWVIASIAFSFYASNVKNFDATYGSM 260
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
ASI+ L++ +++ + + GAELNA +
Sbjct: 261 ASIIVFLMWTWIMMIILLAGAELNAQLE 288
>gi|27383151|ref|NP_774680.1| hypothetical protein blr8040 [Bradyrhizobium japonicum USDA 110]
gi|27356325|dbj|BAC53305.1| blr8040 [Bradyrhizobium japonicum USDA 110]
Length = 392
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 121/274 (44%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + + A+A+ ++ +LL++FP I + G + +D V
Sbjct: 98 DILWRVYGNIGDHRVLALAAGMTYYSLLAIFPAIAALVAIYGLFSDPSSITKHLDDVSSF 157
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ +V + L F I + + ++ +++L +LN Y E R
Sbjct: 158 IPGGAVEVAREQLTRVATKSNRTLGFTFAIGLAISLWSANAAMKSLFDTLNIVYGEQEKR 217
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ +S G+ + A +V V IP+ L YV L++ GR A
Sbjct: 218 GFFKLNAMSLGFTVGAIAFVVAALGAVVVIPVVLHYVG----LSNATDLLVRIGRWPALF 273
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+AL L ++ F P+ ++ + I G + W+ + LF+ Y F T++ Y L
Sbjct: 274 VALAFALACIYRFGPSRQAPRWTWITWGSAAAALLWLAASGLFSFYAANFGTFNATYGSL 333
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ + +L++ + +LGAELNA M R
Sbjct: 334 GAVVGFMTWLWISAIVILLGAELNAEMEHQTARD 367
>gi|118589631|ref|ZP_01547036.1| ribonuclease BN, putative [Stappia aggregata IAM 12614]
gi|118437717|gb|EAV44353.1| ribonuclease BN, putative [Stappia aggregata IAM 12614]
Length = 317
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI + +A+ ++ LL++FP I L+G + V ++++
Sbjct: 19 LDIGVRVWNAVQRDHIDLIAAGVAFYGLLAIFPTITALTALSGLIVEPVEVSRQLELIES 78
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P ++ I + V GL I A Y +S G+ ++ LN AY VE
Sbjct: 79 VLPHEASQIILAQAADVAGSENAGLSFALIIGLGIAIYSTSRGMASIMEGLNIAYDEVEK 138
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ ++ + LL + V+ + +P+ +Y+ L I+ + R
Sbjct: 139 RSFIALKVRTLAMALLLVLAFVLGLVSALLLPVIFSYLA----LPEWLERILSSARWIIL 194
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L GL FV+ F P+ +K I PG + + W+ + F+ Y+ F++Y+ +
Sbjct: 195 GLLTVTGLSFVYRFGPSRTDAKWKWITPGAVVACLLWLAASYGFSVYVSNFASYNKTFGS 254
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA ++ L++L++ +LGAELN M R
Sbjct: 255 LAGVIILLMWLWISAYIVLLGAELNGEMEAQTRRD 289
>gi|108760431|ref|YP_634071.1| YihY family protein [Myxococcus xanthus DK 1622]
gi|108464311|gb|ABF89496.1| YihY family protein [Myxococcus xanthus DK 1622]
Length = 348
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 1/262 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWP 71
+ F E+ +A+ +S L S+FPF+ F L +L A V ++D + P
Sbjct: 16 RRFVREFQEDSVTDIAAQLSYYLLFSLFPFLFFLVTLVAYLPFAPGAVDAMLDRIRPLVP 75
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
IT + ++ P L T + + +S GV ALR +LN AY V E R + T
Sbjct: 76 GDAMGLITGHLQSLVNQPQPKLLTAGLVITLWSASRGVNALRTALNLAYDVSESRPLWKT 135
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ ++ LL S+ + + F+ ++ + L+ R T + +
Sbjct: 136 QGLAMLVTLLGSLLIPLSFAAFLLGGRLGLWLAGKLQLVDAFHLVWSWLRWPFTASLVML 195
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L + LP K + I PG + W+ FT Y+ F Y+ Y + +M
Sbjct: 196 VLALCYYLLPDVKQRFKYITPGSVLGTGLWLTSTWGFTQYVEHFGKYNVTYGSIGGVMVL 255
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L++LY+ G+ FI+G E+NA +
Sbjct: 256 LLWLYLSGLIFIVGGEVNAILE 277
>gi|110802092|ref|YP_697602.1| YihY family protein [Clostridium perfringens SM101]
gi|110682593|gb|ABG85963.1| YihY family protein [Clostridium perfringens SM101]
Length = 283
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 65/278 (23%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + I+ ++D +A+ + ++ +LS PF++F NL GF + T
Sbjct: 6 KGFLRKTVIFLVMFIKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMNLVGFSHLNS--DT 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+++++ P I +++++ GL IS A + SS+G +A+ LN+AY
Sbjct: 64 ILNLLSNVMPTEAFNLIQSTVIEIVDKEQTGLLWISIALAIWVSSSGFKAVIKGLNKAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +LIS Y +L ++ ++ F+FV + + K + I R
Sbjct: 124 VKETRSYIKLKLISMIYTILLALIVIATLFLFVFGDVIGDFFIKVLEHPEVIYYIWNMLR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + +F++ P + + ++PG + T + W+ + +F +Y+ FS YS +
Sbjct: 184 YVVVILIMVLFFMFLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L ++ + ++++ + ILG E+NA + K
Sbjct: 244 YGSLGAVFMFMTWMFITSMILILGGEINAVLAEKNRLK 281
>gi|256395761|ref|YP_003117325.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256361987|gb|ACU75484.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 365
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 114/270 (42%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F +++ A+ ++ +L+VFP ++ ++ G +G +++D +
Sbjct: 69 VLRRTAGEFRDDELSDRAAALTYYGVLAVFPALLVVVSVLGLIG-PSATNSLLDNIQKLA 127
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + QV + G L + A + +S V A + N Y + E R
Sbjct: 128 PGSVRDLLRTAVTQVRSSRGAGGTLAVVGLAGALWSASGYVAAFIRASNVVYDMREGRPV 187
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ T + G LL L+ + + V LG+ L+ W+ + ++
Sbjct: 188 WKTTPLRVGLTLLMMALLLASAVIVVFTGPLAQRAGDLL-GLGHTALVAWSIAKWPVLVV 246
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ P + + + PG + + W++ + F Y+ F++Y+ Y +A
Sbjct: 247 LVAFMIALLYWAAPNVRDRGFRWVSPGSLLAVVLWLILSAGFALYVANFASYNKTYGTVA 306
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 307 GVIVFLVWLWLSNLAILLGLEFDAELARER 336
>gi|319407820|emb|CBI81473.1| ribonuclease RNAse bn transmembrane protein [Bartonella sp. 1-1C]
Length = 271
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 105/261 (40%), Positives = 164/261 (62%), Gaps = 1/261 (0%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
+ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P I+ + P+ IA+P++
Sbjct: 1 MRDNGSAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTPQKIEALVQLLPDAIAEPLS 60
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
EI+ VL L T+S + AAYF+SNGV ALR +LN+AYRV++ RS + R S +V
Sbjct: 61 KEIITVLTTQRGDLLTLSVIGAAYFASNGVGALRTALNKAYRVIDRRSLFFCRFQSLFFV 120
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
++ +V LV++SF+ V PL + ++ + + + II R ++ LF L+ VH +
Sbjct: 121 IIGTVGLVVISFLLVLAPLLIKIMQNYSSQITEYIGIIRLWRYIIAIVVLFTSLLIVHKW 180
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
LPA + K++ ILPG++ T W + ++ F Y+ F Y++ YAGL SIM ++FLY+L
Sbjct: 181 LPAGQRKVIDILPGILVTIFVWFLTSIAFAQYLTMF-NYASTYAGLTSIMVAIIFLYILS 239
Query: 260 VFFILGAELNASMIIYYWRKK 280
FILG E+NA++I Y +
Sbjct: 240 AIFILGGEINAAIIFYRDHSQ 260
>gi|187935176|ref|YP_001887555.1| YihY family protein [Clostridium botulinum B str. Eklund 17B]
gi|187723329|gb|ACD24550.1| YihY family protein [Clostridium botulinum B str. Eklund 17B]
Length = 282
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 2/270 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I +D +A+AS ++ LLS FPFI+F L GF +++ +
Sbjct: 12 LRLLLHLIVKIKNDDIFALASQLAYYLLLSFFPFIIFLITLVGFSNMDSI--QILNGIKA 69
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE + + I++V GL IS L A + SS+G A+ +N+AY E RS+
Sbjct: 70 VVPEAVFDLTSSTIIEVFDKQYTGLLEISILLALWTSSSGFRAVIKGVNKAYDFKENRSF 129
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+IS V+ ++T+++ + V + Y+ K P ++++ R ++
Sbjct: 130 IKRLIISMISVIALALTIILALSMLVFGNVIENYIIKIIPFTKLVVILWNICRYVFVVII 189
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++ F P+ + K ++PG IF+ + W++ + F+ YI F +S Y L ++
Sbjct: 190 MVFIFASIYRFTPSKRLKWRDVIPGSIFSTVGWIITSYGFSFYIDNFRNFSRFYGSLGAV 249
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +L+++ + FILG E+N + + +
Sbjct: 250 FILMTWLFLVSILFILGVEINCVLEQFKKQ 279
>gi|328880192|emb|CCA53431.1| Ribonuclease BN [Streptomyces venezuelae ATCC 10712]
Length = 374
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 109/270 (40%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ + FV ++ A+ ++ LL++FP ++ +L G V++ G
Sbjct: 55 ILRRSAREFVSDELTDRAAALTYYGLLALFPALLVLVSLLGV-SGRSTTDKVLESFGGIT 113
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + P G + T+ L A + +S V A S NR Y V E R
Sbjct: 114 PGPAHDVLDQAVENLQGAPGTGAAMATVGVLLALWSASGYVGAFMRSANRVYGVPEGRPL 173
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ + G L V + + V +G+ L +W + ++
Sbjct: 174 WKVLPVRLGLTALLVVMAAASALIVVLTGEVARRAGDLL-GVGDSALTVWAIAKWPVLVV 232
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ P +S+ I PG + W+ + F Y+ F+TY+ +Y +
Sbjct: 233 LVTMMLALLYWASPNVESRGWRWITPGSALALLIWLAASAGFAVYVSEFATYNRVYGTMG 292
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ L++L++ + +LG E +A +
Sbjct: 293 GVVVFLIWLWISNLAVLLGLEFDAETLRQR 322
>gi|255527896|ref|ZP_05394741.1| ribonuclease BN [Clostridium carboxidivorans P7]
gi|296184663|ref|ZP_06853074.1| YihY family protein [Clostridium carboxidivorans P7]
gi|255508423|gb|EET84818.1| ribonuclease BN [Clostridium carboxidivorans P7]
gi|296050445|gb|EFG89868.1| YihY family protein [Clostridium carboxidivorans P7]
Length = 282
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 120/270 (44%), Gaps = 2/270 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + + F E+D +++S ++ S + + FPF++F + G+ + V+ + P
Sbjct: 9 IKNLMFRFNEDDVLSLSSQLAYSLIFAFFPFLIFLMTVLGYSSINS--QDVLAGLNRIIP 66
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I + I++V+ L + S + + +S+G + LN+AY +E RS+
Sbjct: 67 RSALELIKNTIIEVVDYKNPHLMSFSLIFTIWSASSGFNGVIKGLNKAYDELEHRSFLKV 126
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ I+ + + + M F+ V + + ++ R ++
Sbjct: 127 QFIAVLCTIGLVIAIFTMIFLLVFGQIIGNSLALNLGFSEEFKIMWHIVRYIIIIVLTIF 186
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ + P + + G IF I ++ ++ F Y+ F YS +Y + +++
Sbjct: 187 ILAALYHYTPCRRLTWREVSSGAIFATIGLILVSIGFAFYVNNFGNYSKIYGSIGAVIIL 246
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKKP 281
L +L+++ + ++G ELNA++ K+
Sbjct: 247 LTWLFLVSITVVMGGELNATLAFDREGKEK 276
>gi|329113280|ref|ZP_08242063.1| Putative ribonuclease-like protein YfkH [Acetobacter pomorum DM001]
gi|326697421|gb|EGE49079.1| Putative ribonuclease-like protein YfkH [Acetobacter pomorum DM001]
Length = 356
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 119/274 (43%), Gaps = 7/274 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ ++ + +A+ + LS+FP I ++ G Q V ++V+
Sbjct: 74 ILQRTVKSLISGPTTLVAAGCAFYTTLSLFPAISSLISIYGLAFDVQTVAPQMEVLRNLL 133
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + D + ++A P L IS A + +S ++ +LN AY E R+
Sbjct: 134 PPNAFTLLYDRVQTLVAEPPSSLTFNLIISVSVALWSASAATRSIISALNIAYNTRENRN 193
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK-FFPALGNLLLIIWNGRIYATM 186
++I ++ +F L + V+ + VA+PL L P + + M
Sbjct: 194 FFIFQITAFALTLCGILGAVLTLALMVAMPLLLNLPALLHIPTPPGSIEFMARWSGPVVM 253
Query: 187 LAL-FIGLIFVHLFLPAAK--SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L ++ F P ++ +LPG + + ++W+ ++ F++Y+ ++YS Y
Sbjct: 254 FTFETLALSALYRFGPNRHISTQWRWVLPGAVCSTLTWIAASLGFSYYVAHIASYSATYG 313
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L + + +++ ++ ++GAELNA M Y
Sbjct: 314 PLGAFIAIMMWFFVTAWVVLMGAELNAEMESYAR 347
>gi|163790741|ref|ZP_02185168.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
gi|159874042|gb|EDP68119.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
Length = 313
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 68/262 (25%), Positives = 126/262 (48%), Gaps = 2/262 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
++ + E + W + IS LLS+FP IV N+ + ++ + A P
Sbjct: 28 VVQKYREAEVWNSGAIISYYFLLSIFPVIVVIGNVLPYFRLD--AAELLPYIENAVPNYF 85
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ D + + G+ +I+ + A + +S G+ A+++S+N+AY V R+ I RL
Sbjct: 86 FDQVEDVLTSWFTRSSGGILSIAVIGALWSASRGMTAMQVSMNKAYGVEPRRNIVIIRLF 145
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
S L V+++++ VF L L Y+ + + R TM+ LFI
Sbjct: 146 SLILTTLLIVSIMLLVIVFGFGQLILEYITPIIDIPLTISETFQSLRWPVTMIVLFIIFC 205
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F+P AK S+LPG F+ I W++ + +F Y+ F+ + Y + + M L++
Sbjct: 206 LLYYFVPHAKIAFKSVLPGAAFSTIGWMLVSQVFAVYVEYFAIGTKSYGTIGTFMIMLIW 265
Query: 255 LYMLGVFFILGAELNASMIIYY 276
L ++G GA +NA++ +Y
Sbjct: 266 LQVIGALMTAGAVINAAIDVYQ 287
>gi|258543569|ref|YP_003189002.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-01]
gi|256634647|dbj|BAI00623.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-01]
gi|256637703|dbj|BAI03672.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-03]
gi|256640757|dbj|BAI06719.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-07]
gi|256643812|dbj|BAI09767.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-22]
gi|256646867|dbj|BAI12815.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-26]
gi|256649920|dbj|BAI15861.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-32]
gi|256652910|dbj|BAI18844.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655964|dbj|BAI21891.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-12]
Length = 356
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 119/274 (43%), Gaps = 7/274 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ ++ + +A+ + LS+FP I ++ G Q V ++V+
Sbjct: 74 ILQRTVKSLISGPTTLVAAGCAFYTTLSLFPAISSLISIYGLAFDVQTVAPQMEVLRSLL 133
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + D + ++A P L IS A + +S ++ +LN AY E R+
Sbjct: 134 PPNAFNLLYDRVQTLVAEPPSSLTFNLIISVSVALWSASAATRSIIAALNIAYNTRENRN 193
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK-FFPALGNLLLIIWNGRIYATM 186
++I ++ +F L + V+ + VA+PL L P + + M
Sbjct: 194 FFIFQITAFALTLCGILGAVLTLALMVAMPLLLNLPALLHIPTPPGSIEFMARWSGPVVM 253
Query: 187 LAL-FIGLIFVHLFLPAAK--SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L ++ F P ++ +LPG + + ++W+ ++ F++Y+ ++YS Y
Sbjct: 254 FTFETLALSALYRFGPNRHISTQWRWVLPGAVCSTLTWIAASLGFSYYVAHIASYSATYG 313
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L + + +++ ++ ++GAELNA M Y
Sbjct: 314 PLGAFIAIMMWFFVTAWVVLMGAELNAEMESYAR 347
>gi|311893944|dbj|BAJ26352.1| putative ribonuclease [Kitasatospora setae KM-6054]
Length = 358
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 111/270 (41%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F++++ A+ ++ +L+VFP ++ ++ G LG V+D +
Sbjct: 51 VLRRTAGEFLDDELPDRAAALTYYGVLAVFPALLVLVSILGLLGGP-VTGAVLDNLRQLA 109
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P ++ + Q+ G + L A + +S V A + N Y + E R
Sbjct: 110 PGPARDVLSGSVEQLRDGRGAGGVFAAVGLLGALWSASGYVAAFIRAANAVYDIREGRPV 169
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATML 187
+ + G L+ V L+ + + V +G + +W+ + +L
Sbjct: 170 WKLTPLRVGLTLVLMVLLLASAVIVVFTGPLAERAGDLL-GIGPTAVTVWSVAKWPVLVL 228
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + ++ P + + I PG + + W+ + F Y+ F +Y+ Y LA
Sbjct: 229 LVSVMIALLYWAAPNVRGRGWHWISPGSLLAVLLWLALSGGFAAYVAWFGSYNRTYGTLA 288
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 289 GVVVFLVWLWLSNLAVLLGLEFDAELARER 318
>gi|312194341|ref|YP_004014402.1| ribonuclease BN [Frankia sp. EuI1c]
gi|311225677|gb|ADP78532.1| ribonuclease BN [Frankia sp. EuI1c]
Length = 360
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 105/271 (38%), Gaps = 4/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ + F E+ A+ ++ ++L++FP ++ +L G +G TV+D +
Sbjct: 41 WAVLRRTVAEFNEDALSDRAAALTYYSILAIFPALLVLVSLLGVIG-QSATTTVLDNLQN 99
Query: 69 AWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P ++ + V G L + A + +S V A + N Y + E R
Sbjct: 100 LTPASARDVVSGAVDGVRGSAGTGSVLAIVGLAGALWSASGYVAAFIRAANAVYDIPEGR 159
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + G + V + + + V + + + +
Sbjct: 160 PAWKIAPLRIGLTVALMVLAALSAVIVVFSGKVARQAGSALGIGQTAVDVWSYAKWPVLV 219
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + + ++ P + + PG + W+V + F Y+ F +Y+ Y +
Sbjct: 220 VFVILMIAILYWAAPNVRHQGFRWLTPGTVLALAIWMVASAAFAFYVSNFGSYNKTYGAV 279
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A ++ LV+L++ + +LG E +A +
Sbjct: 280 AGVIIFLVWLWLTNLAILLGLEFDAELARQR 310
>gi|199598315|ref|ZP_03211735.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus HN001]
gi|199590768|gb|EDY98854.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus HN001]
Length = 334
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 2/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I AI + + A+ ++ LLS+FP I+F AN +LG ++ +
Sbjct: 39 FWVFIKLAINRISDSNIGQSAAALAYYTLLSLFPLILFVANALPYLGLK--YSSLATYLT 96
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P + + + I +L + GL I A+A + +S GV L++ N+ Y V ++
Sbjct: 97 QAVPANVMEWLDPIIANLLDSSSGGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQN 156
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I RL+S + + + VF L ++ + L R T+
Sbjct: 157 FIIQRLLSMLMTFTLIIVMGAILIVFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITVT 216
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALF+ ++F+ FLP K K+ ++LPG FT I W++ A F+ Y+ F T Y + +
Sbjct: 217 ALFVIIMFLDYFLPNVKIKMWTVLPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIGT 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +++L + + GA +NA Y+ +
Sbjct: 277 FIAIMLWLNFSALVLLWGAVINALTAEYFIGR 308
>gi|300741768|ref|ZP_07071789.1| YihY family protein [Rothia dentocariosa M567]
gi|300380953|gb|EFJ77515.1| YihY family protein [Rothia dentocariosa M567]
Length = 431
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV-IDVVFGA 69
I A F G +A+ ++ +LS FP ++ +L G G + V ++ +
Sbjct: 28 IFRRAGFSFGAHGGTDLAAALTYFTVLSAFPALLAILSLLGIFGQGEDSAKVILEFLQER 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ + + I Q+ G I L+A + +S V + +LN Y V E R
Sbjct: 88 APQQMYSILEGPIHQLTNGQGAGFALIIGILSALWSASGYVGSFGRALNNVYGVREGRPA 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG-NLLLIIW-NGRIYATM 186
++ + V +V+M +F+ L +V + P + L+ ++W NGR +
Sbjct: 148 WLLIPYNVFVTTGVIVLVVLMMLMFLLGASVLDWVAPYMPGVDIELIKVLWLNGRWVLIL 207
Query: 187 LALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + ++ P + KI PG + +G + FT Y FS Y+ Y +
Sbjct: 208 ILAVFLIAMLYTATPNVRRLKIRWTSPGAVIALFGMGLGGLGFTIYTNNFSKYNATYGLI 267
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ LVFL+++ + GA ++A
Sbjct: 268 GGVIVMLVFLWIMNNMLVFGAHVDAEFERMRQ 299
>gi|312886962|ref|ZP_07746566.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
gi|311300274|gb|EFQ77339.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
Length = 329
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 59/271 (21%), Positives = 129/271 (47%), Gaps = 1/271 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ + + +E AS ++ + LL++FP +F L ++ F T+++++
Sbjct: 34 LYTVAIFFFQELKQESLANKASSLAYTFLLAIFPGTIFLFTLIPYIPIKSFQDTLLNIIE 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I ++ GL + L+A +F++NGV L + N++ +VE R+
Sbjct: 94 LILPSNAYAAFESTIEDIVKNQHGGLLSFGFLSAMFFATNGVHKLMRAFNKSSLIVETRT 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYATM 186
W R I+ +L S +L + + +++++ G + ++ R +
Sbjct: 154 WLKRRWIALVLTMLISFSLFVAILIMTISQYIISFIQFQLNTGGKFWIYLVMISRWLIVI 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ F+ + ++ + PA K + + PG I V+ ++ FT YI FS+Y+ +Y L
Sbjct: 214 VLFFVTVSILYRYGPAHKRRWKFLSPGSILATCLAVLTSLGFTFYINHFSSYNKLYGSLG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ +++LY+ + ++G ELNAS+ +
Sbjct: 274 TLIVIMLWLYLNSLIILIGFELNASIDLSKR 304
>gi|258508049|ref|YP_003170800.1| ribonuclease BN-like family protein [Lactobacillus rhamnosus GG]
gi|257147976|emb|CAR86949.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus GG]
gi|259649370|dbj|BAI41532.1| ribonuclease BN [Lactobacillus rhamnosus GG]
Length = 334
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 2/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I AI + + A+ ++ LLS+FP I+F AN +LG ++ +
Sbjct: 39 FWVFIKLAINRISDSNIGQSAAALAYYTLLSLFPLILFVANALPYLGLK--YSSLATYLT 96
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P + + + I +L + GL I A+A + +S GV L++ N+ Y V ++
Sbjct: 97 QAVPANVMEWLDPIIANLLDSSSGGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQN 156
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I RL+S + + + F L ++ + L R T+
Sbjct: 157 FIIQRLLSMLMTFTLIIVMGAILIAFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITVT 216
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALFI ++F+ FLP K K+ ++LPG FT I W++ A F+ Y+ F T Y + +
Sbjct: 217 ALFIIIMFLDYFLPNVKIKMWTVLPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIGT 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +++L + + GA +NA Y+ +
Sbjct: 277 FIAIMLWLNFSALVLLWGAVINALTAEYFIGR 308
>gi|253577946|ref|ZP_04855218.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850264|gb|EES78222.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 298
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 3/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ V +++ +E + A A+ + ++S P I+F L + V
Sbjct: 4 KNKTRSVTGLLFGFMERVSGDHVGAYATQAAYFLIMSFIPCILFLTTLVRYTPLTYNV-- 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V D + PE + + ++ V + + +SA+ A + + G++++ LN Y
Sbjct: 62 VRDAIVAFIPENLQSFVLGIVVDVY-KRSTAIVPLSAIVALWSAGKGMQSIINGLNTIYH 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E R+W +TR+ + Y L + +++ + V V ++ P LG +L I R
Sbjct: 121 VKETRNWLLTRIYAVFYTLSLVIAVIVSLLMLVLGNEIQKVVSRYIPFLGRVLGKILGAR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
LF+ + ++ LP K+ S +PG + ++W + + F+ Y F +S M
Sbjct: 181 ALLVFGVLFLVFLMLYKVLPNRKATFKSQIPGALIIAVAWSIFSYGFSFYFEIFPGFSNM 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y LA+I+ +V+LY+ + GAE+NA +
Sbjct: 241 YGNLATIIMVMVWLYICMNLLLYGAEINAYFEKEFR 276
>gi|229551895|ref|ZP_04440620.1| ribonuclease BN [Lactobacillus rhamnosus LMS2-1]
gi|258539317|ref|YP_003173816.1| ribonuclease BN-like family enzyme [Lactobacillus rhamnosus Lc 705]
gi|229314739|gb|EEN80712.1| ribonuclease BN [Lactobacillus rhamnosus LMS2-1]
gi|257150993|emb|CAR89965.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus Lc 705]
Length = 334
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 2/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I AI + + A+ ++ LLS+FP I+F AN +LG ++ +
Sbjct: 39 FWVFIKLAINRISDSNIGQSAAALAYYTLLSLFPLILFVANALPYLGLK--YSSLATYLT 96
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P + + + I +L + GL I A+A + +S GV L++ N+ Y V ++
Sbjct: 97 QAVPANVMEWLDPIIANLLDSSSGGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQN 156
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I RL+S + + + F L ++ + L R T+
Sbjct: 157 FIIQRLLSMLMTFTLIIVMGAILIAFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITVT 216
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
ALFI ++F+ FLP K K+ ++LPG FT I W++ A F+ Y+ F T Y + +
Sbjct: 217 ALFIIIMFLDYFLPNVKIKMWTVLPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIGT 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +++L + + GA +NA Y+ +
Sbjct: 277 FIAIMLWLNFSALVLLWGAVINALTAEYFIGR 308
>gi|166032624|ref|ZP_02235453.1| hypothetical protein DORFOR_02339 [Dorea formicigenerans ATCC
27755]
gi|166026981|gb|EDR45738.1| hypothetical protein DORFOR_02339 [Dorea formicigenerans ATCC
27755]
Length = 273
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 123/267 (46%), Gaps = 3/267 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++D I + ++ A A+ + +L + P I+ + + + V
Sbjct: 2 KKIKELYDDIMELTGEITKDHVGAYAAQTAFFFMLCMIPIILLLLTMVQYTPVTK--ADV 59
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ V +P + IT + QV + G+ I+ + A + + GV A+ LN Y
Sbjct: 60 MTAVIQVFPSSVDSLITSIVNQVY-NQSSGIIPITIVVALWSAGKGVLAMSSGLNCVYNC 118
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R+++ R+ + Y ++ + ++ + + V ++ + P L N+ + R
Sbjct: 119 RETRNYFFLRIRATVYTVMFILVIIFLLVLSVFGNSLNIFIAEHVPFLRNMADWLIRARN 178
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T + + + L+ ++ FLP + LPG +F+ + W+V + +F+ Y+ F +S+MY
Sbjct: 179 IITPIVMIVFLLLIYKFLPNRRDTYKRQLPGAVFSTLGWMVISWVFSVYVDVFKGFSSMY 238
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELN 269
L +IM ++++Y ++G ELN
Sbjct: 239 GSLTTIMLIMMWMYFCMYCILIGGELN 265
>gi|312962672|ref|ZP_07777161.1| ribonuclease BN [Pseudomonas fluorescens WH6]
gi|311283047|gb|EFQ61639.1| ribonuclease BN [Pseudomonas fluorescens WH6]
Length = 314
Score = 192 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 124/266 (46%), Gaps = 1/266 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ FV+++ AS ++ L S+FPF++F L GFL F +
Sbjct: 11 LHKVLARTVKEFVDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q L GL ++ + A + +S GV + ++N AY VVE R
Sbjct: 71 LVLPPQALEQVNPVIDQ-LQQSKGGLLSVGIVIALWTASAGVRLMMSAMNAAYDVVEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R ++
Sbjct: 130 IWKRFPLSIFYTVGIAGMLLAAAALMVLGPQVMEWLAGQIGMQEFVVTLWTIVRWPLIVI 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + ++ +P + + I PG + + W+V ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LLMFAVALMYYVMPDVEQEFRFITPGSVLAVVVWIVASLGFGYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
I+ L++ Y+ +LGAE+NA +
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIE 275
>gi|229918098|ref|YP_002886744.1| ribonuclease BN [Exiguobacterium sp. AT1b]
gi|229469527|gb|ACQ71299.1| ribonuclease BN [Exiguobacterium sp. AT1b]
Length = 317
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 121/267 (45%), Gaps = 4/267 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F E D + ++ LS+FP I+F L F Q + + + P
Sbjct: 17 KELFRRFQEHDVQDYGATLAFFWFLSIFPGIIFILALLSFFDVSQ--DSFQNQLNDLAPG 74
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
A I + + P GL ++ A+ A + ++ GV+ L + AY R++++ +
Sbjct: 75 SAASGFLTGIFEAIGEPRGGLLSLGAILAIWSAAKGVDRLITTSLHAYGEDNERNFFVKK 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIYATMLALF 190
++ G +L + ++++ V +++V ++ P G ++I R T + L
Sbjct: 135 GLALGLTILLGIGMLLLILSNVFGSQIISFVTEYLPVNITGAEEMMINVFRYVLTTVVLI 194
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L + P S +PG IF I W + + F+ Y+ F +Y + Y L I+
Sbjct: 195 LTLSIFYKVSPQQHVFWKSTIPGAIFGVIGWQIVSFGFSLYVSNFGSYDSTYGSLGGIIV 254
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
L++L + G+ ++G+E+NA+ + ++
Sbjct: 255 TLLWLQLTGMIILIGSEINATWMRFFK 281
>gi|295136139|ref|YP_003586815.1| ribonuclease BN [Zunongwangia profunda SM-A87]
gi|294984154|gb|ADF54619.1| ribonuclease BN [Zunongwangia profunda SM-A87]
Length = 297
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 117/276 (42%), Gaps = 8/276 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+++I + + +++ ++ A L+VFP I+ +L G Q + I+ +
Sbjct: 23 WEVIKEVKNEISADKVSIVSAGVAFYAFLAVFPAIMALISLYGLATDPQEIQRQINELSA 82
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + + L L + + + ++ G L ++ AY +E
Sbjct: 83 MMPRQAFEVLQQRVDVFLQTHGDQLGWGTVFGIIFSIWSANKGTNGLLTGVDIAYDTIEN 142
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + L++ + + + L++ + V P + + L +I R
Sbjct: 143 HNIFKQYLMASVFTIGGLIMLILSMILIVGFPALVHKIG----LPAKLEDLISWSRWLLL 198
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ I L V+ F PA K ++PG +F+ I W+ + F+ Y+ F Y +Y
Sbjct: 199 AFLVSIFLCLVYKFAPARPKPTTRWVIPGALFSTIVWLAASYGFSFYVSNFGNYGEVYGS 258
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++++ L++LY+ +LGAE+N ++ Y +K
Sbjct: 259 ISAVVVLLLWLYITCFIILLGAEINTEIVDYLIAEK 294
>gi|111224904|ref|YP_715698.1| hypothetical protein FRAAL5539 [Frankia alni ACN14a]
gi|111152436|emb|CAJ64172.1| Putative membrane protein (partial) [Frankia alni ACN14a]
Length = 388
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 106/264 (40%), Gaps = 4/264 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ + F+++D A+ ++ A+L++FP ++ +L G ++D +
Sbjct: 87 FGVLRRTVREFMDDDLPDRAAALTYYAVLAIFPALLVLVSLVGL-LGRSTTDRLLDNIEQ 145
Query: 69 AWPEVIAKPITDEILQVL-AVPAKGLFTISALA-AAYFSSNGVEALRISLNRAYRVVEMR 126
P + + + + + + G+ I LA A + +S + A + N Y + E R
Sbjct: 146 LTPGAARDILHNAVNGLRDSAGSGGVVAIIGLAGALWSASGYIAAFIRAANAVYDMPEGR 205
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + V L + S + V + + +
Sbjct: 206 PVWKIAPLRLLITITLVVLLAVSSVIVVFSGALAEQAGTAIGLGHEAITAWSFAKWPVLV 265
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ P + + PG + + W+V + F Y+ TF +Y+ Y L
Sbjct: 266 LIVTAVIALLYWSTPNVRPHGFRWLTPGSVLAVVIWLVASGAFAFYVATFGSYNKTYGTL 325
Query: 246 ASIMTCLVFLYMLGVFFILGAELN 269
A ++ LV+L++ + +LG E +
Sbjct: 326 AGVIVFLVWLWLSNLAILLGLEFD 349
>gi|262052870|ref|ZP_06025054.1| hypothetical protein SA930_0032 [Staphylococcus aureus 930918-3]
gi|259159224|gb|EEW44284.1| hypothetical protein SA930_0032 [Staphylococcus aureus 930918-3]
Length = 405
Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|167761163|ref|ZP_02433290.1| hypothetical protein CLOSCI_03568 [Clostridium scindens ATCC 35704]
gi|167660829|gb|EDS04959.1| hypothetical protein CLOSCI_03568 [Clostridium scindens ATCC 35704]
Length = 281
Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ I + E+ A A+ + +L + P I+ + + + V
Sbjct: 2 KRLKEIYQKILNMTADVTEDHVGAYAAQSAYFFMLCMIPIILLLITMVQYTPVTK--ADV 59
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ V +P + IT + QV + G+ I+ + A + + GV A+ LN Y+
Sbjct: 60 MTAVIQVFPTSVDSMITSIVNQVY-NQSSGIIPITVVVALWSAGKGVLAMTSGLNCVYKC 118
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R++ R+ + Y ++ + ++ + + V ++ P L NL + R
Sbjct: 119 NETRNYIFLRIRATIYTVMFILVIIFLLVLSVFGNTLNIFIAAHVPILKNLADRLIAMRT 178
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T + L + + ++ FLP K K+ LPG +F I W++ + +F+ Y+ F +S MY
Sbjct: 179 IITPIVLMVFCLLIYKFLPNRKDKLRKQLPGAVFAAIGWMIVSWIFSVYVDIFKGFSDMY 238
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELN 269
L +I+ ++++Y +LG ELN
Sbjct: 239 GSLTTIVLIMLWMYFCMYCILLGGELN 265
>gi|169344091|ref|ZP_02865077.1| YihY family protein [Clostridium perfringens C str. JGS1495]
gi|169297826|gb|EDS79923.1| YihY family protein [Clostridium perfringens C str. JGS1495]
Length = 283
Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + I+ ++D +A+ + ++ +LS PF++F L GF +
Sbjct: 6 KGFLRKTVIFLVMFIKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGFSHLNS--DA 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++++ P I +++++ GL IS A + SS+G +A+ LN+AY
Sbjct: 64 VLNLLSNVMPTEAFNLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +LIS Y +L ++ ++ F+FV + + K + I R
Sbjct: 124 VKENRSYIKLKLISMIYTILLALIVIATLFLFVFGDVIGDFFMKVLEHPEFIYYIWNMLR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + +F++ P + + ++PG + T + W+ + +F +Y+ FS YS +
Sbjct: 184 YVVVILIMILFFMFLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L ++ + ++++ + ILG E+NA + K
Sbjct: 244 YGSLGAVFMFMTWMFITSMILILGGEINAVLAEKNRLK 281
>gi|146281873|ref|YP_001172026.1| ribonuclease BN, putative [Pseudomonas stutzeri A1501]
gi|145570078|gb|ABP79184.1| ribonuclease BN, putative [Pseudomonas stutzeri A1501]
Length = 265
Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
AS ++ L ++FPF+VF L GFL F + A P V + I I
Sbjct: 1 MSTYASALAYRGLFAMFPFLVFLIALLGFLDLQNFFDWLRMQAELALPPVAMEQINPVID 60
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
Q L GL + L A + +S G +L +LNRAY V E R + +++ Y +
Sbjct: 61 Q-LQEQQAGLLSFGILVALWTASIGFRSLMNALNRAYDVEEGRPTWKLIILALAYTAGVA 119
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
V L+ + + V P A+ ++ ++++ R +L L + + ++ P
Sbjct: 120 VLLLFTAGLMVIGPQAMEWLAGQVGMRELVVVLWTWLRWPVIVLMLMLVVALLYYVAPDV 179
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ + I PG + + W++ +V F Y+ F+ Y+ Y + +I+ L++LY+ +
Sbjct: 180 EQEFRFITPGSVLAVLVWILASVAFGVYVQNFADYNATYGSIGAIIVLLLYLYISAAVLL 239
Query: 264 LGAELNASMI 273
GAELNA +
Sbjct: 240 FGAELNAVIE 249
>gi|77361434|ref|YP_341009.1| ribonuclease protein [Pseudoalteromonas haloplanktis TAC125]
gi|76876345|emb|CAI87567.1| putative ribonuclease protein [Pseudoalteromonas haloplanktis
TAC125]
Length = 319
Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 118/267 (44%), Gaps = 8/267 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI ++ +A+ ++ ALL++FP + ++ + + + + V
Sbjct: 22 WDITKRIFTQMSRDNLSLVAAGVAFYALLAIFPALAALVSIYAYFASPTDIGAHLSQVIE 81
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISA---LAAAYFSSNGVEALRISLNRAYRVVEM 125
PE + I +I + + L + + + SS G +AL + N +Y+ E
Sbjct: 82 LLPESTGELILSQIASIAQSSSTSLSLSAIGTLILTIWSSSKGSQALITACNISYQEYEK 141
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS++ +L+ F + + A V + + +P+ L V N+ L+I
Sbjct: 142 RSFFKAQLVRFLFSIGAIVVAIFALLIIGILPVVLNLVGLK----ENIDLLITFISWPLL 197
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L+ ++ + P K +K I G + I W+V ++ F+ Y+ F++Y+ Y
Sbjct: 198 AFTFNFALVLLYRYAPHRKPAKWRWITLGSVIATILWIVASIGFSFYVSKFASYNETYGS 257
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
L ++ L++LY+ ILGA +NA+
Sbjct: 258 LGGVVIMLMWLYISAYIVILGATINAA 284
>gi|332308360|ref|YP_004436211.1| ribonuclease BN [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175689|gb|AEE24943.1| ribonuclease BN [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 318
Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 114/269 (42%), Gaps = 8/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI+ ++ ++++ +A+ + LL++FP + ++ G + + + ++ + G
Sbjct: 21 WDILRRTVKKMLDDNLSLIAAGVGFYFLLAIFPMLAAFVSVYGLVVSPDELQQHLNSLIG 80
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + I +I ++ L S L A + +S G +A+ + N Y E
Sbjct: 81 VVPAQGREIIQKQISNIINKSQAELSASVVFSTLFAVWSASKGAQAMVTASNITYDQREK 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + ++ +++ V++ + L + + ++
Sbjct: 141 RGLI----MMLVMRVVLTLSAVLVLAGALLAIALLPILLNQIGLKEHSSFLVKLITWPFL 196
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + L + + P +K + PG I ++WV+ +V F++Y+ F Y Y
Sbjct: 197 AIVFNLALASFYRYGPHRSSAKWRWVTPGSILASVTWVMFSVGFSYYLGQFGQYDKTYGS 256
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
L S++ L++ Y+ +LGAE NA+M
Sbjct: 257 LGSVVVLLMWFYLTAFIILLGAEFNAAME 285
>gi|169825899|ref|YP_001696057.1| transport protein [Lysinibacillus sphaericus C3-41]
gi|168990387|gb|ACA37927.1| possible transport protein [Lysinibacillus sphaericus C3-41]
Length = 305
Score = 191 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ D I + A+++ ++ LLS FP ++F L +L V +
Sbjct: 34 FVQDLIGRVKRVEISALSAQLAYFFLLSFFPLLIFLVTLLPYLNLE--TTQVYSFLVNVL 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + K I + + ++L L +I L + +S G+ AL +LN+AY E R+ +
Sbjct: 92 PDEVYKLIENTLNEILTNRNSSLLSIGVLGTIWSASKGINALIRALNKAYDT-EGRAGIL 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S + + V + + + V ++ + N R + +F
Sbjct: 151 DRGLSLVFTVALVVVMAVALLLPVFGQQIGHFLFSIVGIEEQFESVWHNLRWSIPPILIF 210
Query: 191 IGLIFVHLFLPA--AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I L+ ++ F+P + KI+ + PG +F ++W+V F+ YI F+ YS Y + +
Sbjct: 211 IVLMGIYWFVPNTSPRLKILGVWPGAMFATLAWLVVTYAFSFYINNFANYSATYGSIGGV 270
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++LY G+ I G LNA+M +K+
Sbjct: 271 IILMLWLYFTGIILIFGGVLNATMQKRALQKE 302
>gi|18309267|ref|NP_561201.1| YihY family protein [Clostridium perfringens str. 13]
gi|110799841|ref|YP_694741.1| YihY family protein [Clostridium perfringens ATCC 13124]
gi|168207453|ref|ZP_02633458.1| YihY family protein [Clostridium perfringens E str. JGS1987]
gi|168210398|ref|ZP_02636023.1| YihY family protein [Clostridium perfringens B str. ATCC 3626]
gi|18143943|dbj|BAB79991.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|110674488|gb|ABG83475.1| YihY family protein [Clostridium perfringens ATCC 13124]
gi|170661202|gb|EDT13885.1| YihY family protein [Clostridium perfringens E str. JGS1987]
gi|170711461|gb|EDT23643.1| YihY family protein [Clostridium perfringens B str. ATCC 3626]
Length = 283
Score = 191 bits (487), Expect = 8e-47, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + I+ ++D +A+ + ++ +LS PF++F L GF +
Sbjct: 6 KGFLRKTVIFLVMFIKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGFSHLNS--DA 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++++ P I +++++ GL IS A + SS+G +A+ LN+AY
Sbjct: 64 VLNLLSNVMPTEAFNLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +LIS Y +L ++ ++ F+FV + + K + I R
Sbjct: 124 VKETRSYIKLKLISMIYTILLALIVIATLFLFVFGDVIGDFFMKVLEHPEFIYYIWNMLR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + +F++ P + + ++PG + T + W+ + +F +Y+ FS YS +
Sbjct: 184 YVVVILIMILFFMFLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L ++ + ++++ + ILG E+NA + K
Sbjct: 244 YGSLGAVFMFMTWMFITSMILILGGEINAVLAEKNRLK 281
>gi|284993043|ref|YP_003411597.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284066288|gb|ADB77226.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 347
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 106/272 (38%), Gaps = 6/272 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F E++ A+ ++ L++FP ++ ++ G L Q + D + P
Sbjct: 56 LKRTLTEFSEDNLTDWAAALTYYGTLALFPALIALVSIVGLLTNPQ---QLTDALTAVVP 112
Query: 72 EVIAKPITDEILQVLAVPA-KGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + I Q+ A G+ I AA + +S V A + N Y E R +
Sbjct: 113 AQAADTLNPVIEQLAGNTAPVGIGLVIGLAAAIWSASGYVGAFTRAANVVYETPEGRKVW 172
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + L+ + ++ + V + V ++ + + ++ +
Sbjct: 173 KLKPLQLLVTLIGVLFAALIVAMLVLSGGVVDAVAGAIGLPDAVVTVWSYAKWPVVVVLV 232
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ P K + PG + W + LF Y+ FS Y+ Y LA +
Sbjct: 233 ALMIAVLYYSTPNVKLRGFRFTSPGAAVALLVWAAASALFAFYVANFSNYNATYGALAGV 292
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ LV+ ++ + + G EL+A + K+
Sbjct: 293 IVFLVWFWITNLALLFGIELDAEIERTKELKE 324
>gi|283457804|ref|YP_003362396.1| hypothetical protein RMDY18_07440 [Rothia mucilaginosa DY-18]
gi|283133811|dbj|BAI64576.1| predicted membrane protein [Rothia mucilaginosa DY-18]
Length = 455
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 6/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVV 66
+ I+ AI F G MA+ ++ +LS+FP ++ +L G G + ++ +
Sbjct: 49 ILYILRRAIYKFGANGGTDMAAALTYFTVLSIFPALLAIVSLLGVFGHGEESAAVILAFL 108
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + D I Q+ GL L+A + +S + +LN Y V E
Sbjct: 109 KDNAPAQMYAILEDPIKQITGDHGAGLVLLTGILSALWSASGYTGSFGRALNTVYNVREG 168
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN--LLLIIW-NGRI 182
R +I + ++ + + +V+M + + L V ++ P + L+ +IW NGR
Sbjct: 169 RPGWILKPLNVFVTTVIIILVVLMMLMMLLGVTVLDMVGRYVPETVDMELIKLIWLNGRW 228
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + ++ P + K + PG +GA FT Y FS Y+
Sbjct: 229 VLILFMAIALITLLYAATPNVRRYKAWRLSPGAALALFGMGLGAFGFTLYANNFSKYNAT 288
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + ++ L+F++++ + GA L+A +++
Sbjct: 289 YGLIGGVIVMLLFIWIMNNMLLFGAHLDAEIMLMRQ 324
>gi|168212796|ref|ZP_02638421.1| YihY family protein [Clostridium perfringens CPE str. F4969]
gi|170715733|gb|EDT27915.1| YihY family protein [Clostridium perfringens CPE str. F4969]
Length = 283
Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + I+ ++D +A+ + ++ +LS PF++F L GF +
Sbjct: 6 KGFLRKTVIFLVMFIKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGFSHLNS--DA 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++++ P I +++++ GL IS A + SS+G +A+ LN+AY
Sbjct: 64 VLNLLSNVMPTEAFNLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +LIS Y +L ++ ++ F+FV + + K + I R
Sbjct: 124 VKETRSYIKLKLISMIYTILLALIVIATLFLFVFGDVIGDFFMKVLEHPELIYYIWNILR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + +F++ P + + ++PG + T + W+ + +F +Y+ FS YS +
Sbjct: 184 YVVVILIMILFFMFLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L ++ + ++++ + ILG E+NA + K
Sbjct: 244 YGSLGAVFMFMTWMFITSMILILGGEINAVLAEKNRLK 281
>gi|332670932|ref|YP_004453940.1| ribonuclease BN [Cellulomonas fimi ATCC 484]
gi|332339970|gb|AEE46553.1| ribonuclease BN [Cellulomonas fimi ATCC 484]
Length = 361
Score = 191 bits (486), Expect = 9e-47, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 113/266 (42%), Gaps = 4/266 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA-W 70
+ F+ ++ A+ ++ A+L++ P ++ ++ G +G Q + V+D+V
Sbjct: 41 RRTVREFLADECTDQAAALTYYAVLAIAPALLAVVSVLGLVGDPEQTLNRVMDLVADLGA 100
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMRSWY 129
PE A+ + + V + G+ + + A + +S V A +NR Y V E R +
Sbjct: 101 PEDAAQTVEPIVQAVTSNSKAGVALVLGVLLALWSASGYVAAFGRGMNRIYEVDEGRPIW 160
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R + L + V++ V + G + + + ++ +
Sbjct: 161 KLRPVILLVTLALVLIAVLVVVAMVLSGPVARTIGDAVGLSGTAVTVWNVFKWPVVVVLV 220
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ P + K I G + W + +V F Y+ TF++Y Y LA +
Sbjct: 221 VVAIAVLYHATPNVRQPKFRWISVGAAVALLVWALASVAFGFYVTTFASYDATYGSLAGV 280
Query: 249 MTCLVFLYMLGVFFILGAELNASMII 274
+ L++L++ + + GAEL+A +
Sbjct: 281 VVFLLWLWISNLALLFGAELDAELER 306
>gi|149183505|ref|ZP_01861932.1| hypothetical protein BSG1_15038 [Bacillus sp. SG-1]
gi|148848777|gb|EDL63000.1| hypothetical protein BSG1_15038 [Bacillus sp. SG-1]
Length = 280
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 2/260 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + D +A+ ++ LLS+FP ++F L +L Q ++ V+ P
Sbjct: 15 KKLFQKISDGDVTGLAAQLAYFFLLSLFPLLIFLVTLLPYLPFSQ--QDILSVINDFAPG 72
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ I I +V++ GL + S +A + +SNG+ A+ SLN AY V E RS+ +TR
Sbjct: 73 ETMQMIQSTINEVMSNRNTGLLSFSIIATIWSASNGMNAIVKSLNDAYEVEESRSYIVTR 132
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+S + +I + V ++ F L I R + + LFI
Sbjct: 133 LMSIVLTIAMIFVFIIALLLPVFGKQIGLFLFSQFGFSDQFLTIWGAIRWAISPIILFIV 192
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ P+ K K +S +PG +F + WV ++ F++Y+ F YS Y + I+ +
Sbjct: 193 FVGLYFIAPSKKIKCLSAVPGAVFAALGWVGASLAFSYYVSNFGNYSATYGSIGGIIVLM 252
Query: 253 VFLYMLGVFFILGAELNASM 272
++ Y+ G+ ++G +NA M
Sbjct: 253 IWFYLTGIIIMIGGHINAIM 272
>gi|168216626|ref|ZP_02642251.1| YihY family protein [Clostridium perfringens NCTC 8239]
gi|182626819|ref|ZP_02954556.1| YihY family protein [Clostridium perfringens D str. JGS1721]
gi|177907828|gb|EDT70428.1| YihY family protein [Clostridium perfringens D str. JGS1721]
gi|182381516|gb|EDT78995.1| YihY family protein [Clostridium perfringens NCTC 8239]
Length = 283
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + I+ ++D +A+ + ++ +LS PF++F L GF +
Sbjct: 6 KGFLRKTVIFLVMFIKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGFSHLNS--DA 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++++ P I +++++ GL IS A + SS+G +A+ LN+AY
Sbjct: 64 VLNLLSNVMPTEAFNLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +LIS Y +L ++ ++ F+FV + + K + I R
Sbjct: 124 VKETRSYIKLKLISMIYTILLALIVIATLFLFVFGDVIGDFFMKVLEHPEFIYYIWNILR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + +F++ P + + ++PG + T + W+ + +F +Y+ FS YS +
Sbjct: 184 YVVVILIMILFFMFLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L ++ + ++++ + ILG E+NA + K
Sbjct: 244 YGSLGAVFMFMTWMFITSMILILGGEINAVLAEKNRLK 281
>gi|229494654|ref|ZP_04388414.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
gi|229318447|gb|EEN84308.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
Length = 321
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 119/254 (46%), Gaps = 5/254 (1%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVP 89
++ ++LS+FP ++ +L G G V V+ +V P + + + + Q + P
Sbjct: 1 MTYYSVLSLFPAVLAVVSLLGVFGQGQSTVDAVLQIVSDLGPSSAVETLKEPVQQHVEAP 60
Query: 90 AKGLFTISALA-AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
A G I+ +A A + +S + A +LNR Y V E R + R + V + ++ L+
Sbjct: 61 AAGFALIAGIAGALWSASGYLVAFGRALNRMYEVEEGRPVWKLRP-TMLLVTVTALALIG 119
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLALFIGLIFVHLFLPAAKS-K 206
+ V +A+ +A G+ L +WN R ++ + + + ++ P + K
Sbjct: 120 CAAVMLAVSGPVARAIGDASGAGDTALTVWNIARWPVVLVFVVLAVAILYYAPPNIQQPK 179
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
I G + W++ +V+F Y+ FS+Y+ Y LA + L++L++ + + GA
Sbjct: 180 FRWISGGAALAIVVWILASVIFGFYVANFSSYNKTYGSLAGAIVFLLWLWITNLALLFGA 239
Query: 267 ELNASMIIYYWRKK 280
EL++ + ++
Sbjct: 240 ELDSELERGRELRQ 253
>gi|157691522|ref|YP_001485984.1| hypothetical protein BPUM_0738 [Bacillus pumilus SAFR-032]
gi|157680280|gb|ABV61424.1| hypothetical protein BPUM_0738 [Bacillus pumilus SAFR-032]
Length = 272
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 80/262 (30%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I IE F+ +G A ++ ++ LLS+FPF++F L G+L V+ V+ G
Sbjct: 3 FIKALIERFLLHEGPAKSAELAYFFLLSLFPFLIFVLTLVGYLPLTS--KDVLSVISGYA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE I Q L GL + +AA + +SNG+ A+ + N AY V E RS+ +
Sbjct: 61 PEGALSMIESIAEQTLNNRNGGLLSFGIIAALWSASNGINAVVRAFNHAYEVEENRSFIL 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S + +T++ + V +V K L I R + L L
Sbjct: 121 VRLTSIILTIAMVLTIIFALMLPVFGKELGLFVAKLVGQSDAFLTIWTAMRWIISPLILL 180
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ F P + K+ +LPG IF I W++ ++LF+ Y+ F+ YS MY + I+
Sbjct: 181 IVFTSLYYFAPNMRLKLKFVLPGAIFASIGWILVSMLFSFYVGEFANYSAMYGSIGGIII 240
Query: 251 CLVFLYMLGVFFILGAELNASM 272
+++ Y+ G+ ILG ELNA +
Sbjct: 241 LMIWFYLTGIMIILGGELNALL 262
>gi|163746838|ref|ZP_02154195.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
gi|161379952|gb|EDQ04364.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
Length = 315
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + + +A+ ++ ALL++FP + LAG + V ++ +
Sbjct: 20 DILFRVKDEIAADHVSLVAAGVAFYALLAIFPAVTALMALAGLVMEPAQVTEQLEAITRL 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE A I D+ + V GL F I A Y +S GV +L LN AY E R
Sbjct: 80 IPEEAATIILDQAIAVTGSEETGLGWAFLIGVGLALYSASKGVGSLMEGLNVAYDEDETR 139
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + G L+ L++ +A+P + ++ ++ G
Sbjct: 140 GFVTKLIWTLGLTLMLVGVLLLGLGATLAVPAVVNFLA----LPDWFETLLTYGSWVLLA 195
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L ++ + PA ++ + PG + + W+V +V F+ Y+ F +Y+ + +
Sbjct: 196 ALTVLALAVLYRYGPARDNAEWKWLTPGSVIACVLWIVASVGFSIYVSNFGSYNESFGSM 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A + L++L++ +LGAE N+ M +
Sbjct: 256 AGAIILLMWLWISAFIVLLGAEFNSEMEAQTRKD 289
>gi|284046224|ref|YP_003396564.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283950445|gb|ADB53189.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 367
Score = 190 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 109/271 (40%), Gaps = 6/271 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAW 70
+ A + F E+ A+ ++ ++LS+FP ++ L G G + V +++D+V
Sbjct: 76 LKRAAKGFREDGLQDWAAALTYYSVLSLFPLLIVFVALIGVFGEYPRTVNSMLDIVRQIA 135
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISAL--AAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P A + + V+ + A + +S + A + N Y V E R +
Sbjct: 136 PGSTADTLESSLSGVVRNKGGAGALLGIGLLTALWSASGYIGAFMRAANAVYDVEEGRPF 195
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R + + V + +++ FV + LG+ + +WN + ML
Sbjct: 196 WKLRPLQLAVTAVMVVLIALLAIGFVLSGSVAKSLGDTI-GLGDSAVTVWNIAKWPVMLL 254
Query: 189 LFIGLI-FVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + +I + P K + I PG ++ ++ F Y +Y+ Y L
Sbjct: 255 IAVVMIALLTYVGPNVKHPRFRWITPGAAVGIGILILASLGFAFYAANLGSYNATYGALG 314
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L++L++ + + G EL+ +
Sbjct: 315 GVIVFLIWLWIANLALLFGVELDVELERQRE 345
>gi|121601639|ref|YP_988389.1| YihY family protein [Bartonella bacilliformis KC583]
gi|120613816|gb|ABM44417.1| YihY family protein [Bartonella bacilliformis KC583]
Length = 285
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 111/279 (39%), Positives = 172/279 (61%), Gaps = 1/279 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + I+ +AI H+ DG A ASH++LS LL+ FPF +FG AGF+GA + P
Sbjct: 1 MIRNISLCYHILINAISHYWRGDGSAFASHVALSGLLAFFPFFIFGTFFAGFIGAFTYTP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+ I KP+ EI+ VL + + + T+S AAYF+SNG+EALR +LN+AY
Sbjct: 61 QKIAALVQLLPDAITKPLMKEIINVLTIQRRDVLTLSVFGAAYFASNGIEALRTALNKAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS+ R S +V++ ++ LV++SF V P+ + +++ P + + +I
Sbjct: 121 RVVDYRSFIFCRFQSLFFVIIGAIGLVVISFSLVLAPVLVKMMQQHSPFITEYVGVIRLW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYS 239
R ++ I L+ VH +LPA K K++ ILPG++ T +W + ++ F HY+ T Y
Sbjct: 181 RYTIAIVISLISLLIVHKWLPAGKRKLIDILPGIVVTMFAWFLASMAFAHYLNLTMLNYV 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ YAGLASIM ++FLYML FILG E+NA++++Y R
Sbjct: 241 STYAGLASIMVAIIFLYMLSAIFILGGEINAAIMLYRDR 279
>gi|15924873|ref|NP_372407.1| transporter [Staphylococcus aureus subsp. aureus Mu50]
gi|156980199|ref|YP_001442458.1| hypothetical protein SAHV_1868 [Staphylococcus aureus subsp. aureus
Mu3]
gi|255006671|ref|ZP_05145272.2| hypothetical protein SauraM_09385 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|14247655|dbj|BAB58045.1| similar to transporter [Staphylococcus aureus subsp. aureus Mu50]
gi|156722334|dbj|BAF78751.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 405
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVICDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|258451051|ref|ZP_05699087.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257861293|gb|EEV84105.1| conserved hypothetical protein [Staphylococcus aureus A5948]
Length = 405
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSIISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|57652102|ref|YP_186766.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus COL]
gi|57286288|gb|AAW38382.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus COL]
Length = 405
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|15927457|ref|NP_374990.1| hypothetical protein SA1699 [Staphylococcus aureus subsp. aureus
N315]
gi|87160245|ref|YP_494516.1| hypothetical protein SAUSA300_1864 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195779|ref|YP_500588.1| hypothetical protein SAOUHSC_02097 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268355|ref|YP_001247298.1| ribonuclease BN [Staphylococcus aureus subsp. aureus JH9]
gi|150394417|ref|YP_001317092.1| ribonuclease BN [Staphylococcus aureus subsp. aureus JH1]
gi|151222033|ref|YP_001332855.1| ribonuclease BN [Staphylococcus aureus subsp. aureus str. Newman]
gi|161510102|ref|YP_001575761.1| ribonuclease BN [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141456|ref|ZP_03565949.1| hypothetical protein SauraJ_07428 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253729641|ref|ZP_04863806.1| ribonuclease BN [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|257793763|ref|ZP_05642742.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258408905|ref|ZP_05681187.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258420991|ref|ZP_05683922.1| ribonuclease BN [Staphylococcus aureus A9719]
gi|258430037|ref|ZP_05688407.1| ribonuclease BN [Staphylococcus aureus A9299]
gi|258443445|ref|ZP_05691787.1| ribonuclease BN [Staphylococcus aureus A8115]
gi|258445303|ref|ZP_05693494.1| ribonuclease BN [Staphylococcus aureus A6300]
gi|258453300|ref|ZP_05701285.1| ribonuclease BN [Staphylococcus aureus A5937]
gi|269203535|ref|YP_003282804.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus
ED98]
gi|282894548|ref|ZP_06302776.1| hypothetical protein SGAG_01896 [Staphylococcus aureus A8117]
gi|282923219|ref|ZP_06330900.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282928055|ref|ZP_06335662.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|294849428|ref|ZP_06790170.1| hypothetical protein SKAG_01510 [Staphylococcus aureus A9754]
gi|295407261|ref|ZP_06817060.1| hypothetical protein SMAG_02434 [Staphylococcus aureus A8819]
gi|296275884|ref|ZP_06858391.1| hypothetical protein SauraMR_06032 [Staphylococcus aureus subsp.
aureus MR1]
gi|297246212|ref|ZP_06930063.1| hypothetical protein SLAG_02294 [Staphylococcus aureus A8796]
gi|304379067|ref|ZP_07361814.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|13701676|dbj|BAB42969.1| SA1699 [Staphylococcus aureus subsp. aureus N315]
gi|87126219|gb|ABD20733.1| putative membrane protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203337|gb|ABD31147.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741424|gb|ABQ49722.1| putative ribonuclease BN [Staphylococcus aureus subsp. aureus JH9]
gi|149946869|gb|ABR52805.1| putative ribonuclease BN [Staphylococcus aureus subsp. aureus JH1]
gi|150374833|dbj|BAF68093.1| ribonuclease BN [Staphylococcus aureus subsp. aureus str. Newman]
gi|160368911|gb|ABX29882.1| possible ribonuclease BN [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253726637|gb|EES95366.1| ribonuclease BN [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|257787735|gb|EEV26075.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257840352|gb|EEV64814.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257842939|gb|EEV67357.1| ribonuclease BN [Staphylococcus aureus A9719]
gi|257849631|gb|EEV73599.1| ribonuclease BN [Staphylococcus aureus A9299]
gi|257851330|gb|EEV75270.1| ribonuclease BN [Staphylococcus aureus A8115]
gi|257855821|gb|EEV78745.1| ribonuclease BN [Staphylococcus aureus A6300]
gi|257864508|gb|EEV87251.1| ribonuclease BN [Staphylococcus aureus A5937]
gi|262075825|gb|ACY11798.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus
ED98]
gi|269941354|emb|CBI49751.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282590119|gb|EFB95200.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282593130|gb|EFB98129.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282763035|gb|EFC03167.1| hypothetical protein SGAG_01896 [Staphylococcus aureus A8117]
gi|285817563|gb|ADC38050.1| Ribonuclease BN [Staphylococcus aureus 04-02981]
gi|294823565|gb|EFG39992.1| hypothetical protein SKAG_01510 [Staphylococcus aureus A9754]
gi|294967836|gb|EFG43866.1| hypothetical protein SMAG_02434 [Staphylococcus aureus A8819]
gi|297176919|gb|EFH36176.1| hypothetical protein SLAG_02294 [Staphylococcus aureus A8796]
gi|302751755|gb|ADL65932.1| putative membrane protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304342302|gb|EFM08194.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312830255|emb|CBX35097.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315129310|gb|EFT85304.1| hypothetical protein CGSSa03_08610 [Staphylococcus aureus subsp.
aureus CGS03]
gi|315196045|gb|EFU26405.1| hypothetical protein CGSSa01_12032 [Staphylococcus aureus subsp.
aureus CGS01]
gi|320139739|gb|EFW31608.1| YihY family protein [Staphylococcus aureus subsp. aureus MRSA131]
gi|320142345|gb|EFW34159.1| YihY family protein [Staphylococcus aureus subsp. aureus MRSA177]
gi|329314559|gb|AEB88972.1| Ribonuclease BN [Staphylococcus aureus subsp. aureus T0131]
gi|329724799|gb|EGG61303.1| YihY family protein [Staphylococcus aureus subsp. aureus 21172]
gi|329728613|gb|EGG65043.1| YihY family protein [Staphylococcus aureus subsp. aureus 21189]
Length = 405
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|90418166|ref|ZP_01226078.1| putative ribonuclease, BN-like family [Aurantimonas manganoxydans
SI85-9A1]
gi|90337838|gb|EAS51489.1| putative ribonuclease, BN-like family [Aurantimonas manganoxydans
SI85-9A1]
Length = 317
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 78/264 (29%), Positives = 143/264 (54%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
V+ ++ +AI +D +A +I+ A+L++FPF++F ++L F+G + ++
Sbjct: 34 RAVWAVLREAILRLWNDDAMGLAGNIAFRAVLAIFPFLIFASSLTAFIGNREMADGLVTF 93
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P +A+P+ E++ ++ + G+ ++ L +F+ GV+ +R+ LNRAY + E
Sbjct: 94 LIAIVPPALAEPLVSEVMNIVTIRRGGVLSVGVLLTIWFAIGGVDGVRVGLNRAYDIRET 153
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + L+ V+L + LV++ ++ V P A +++ + P + R AT
Sbjct: 154 RSTIVLYLLQVLTVVLTGLVLVVVGYLLVLAPRAGSFLHQLMPGFQPSSVTPSLVRYPAT 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L H+FLPA +S+ ++ PG++FT +W F+ YI F+ Y++ YAGL
Sbjct: 214 AAILTTALFVAHVFLPARRSRFSNMWPGILFTLCAWSALVAAFSVYIGQFANYASYYAGL 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELN 269
A I+ L FLY+ + I G ELN
Sbjct: 274 AGIIAALYFLYLAALVLIFGGELN 297
>gi|258447867|ref|ZP_05696001.1| ribonuclease BN [Staphylococcus aureus A6224]
gi|257858799|gb|EEV81668.1| ribonuclease BN [Staphylococcus aureus A6224]
Length = 405
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 6/269 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
L++LY+ I+GAE+NA I++ R
Sbjct: 309 ILLLWLYITSFIIIVGAEINA---IFHQR 334
>gi|297198844|ref|ZP_06916241.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197711235|gb|EDY55269.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 354
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 103/269 (38%), Gaps = 4/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++++ A+ ++ +LS+FP ++ +L G +G + ++ +
Sbjct: 52 VLRRTAKELLDDELADRAAALTYYGVLSLFPALLVMVSLLGVVG-QRATDKILGNIGDLA 110
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAA--YFSSNGVEALRISLNRAYRVVEMRSW 128
P + D ++Q+ G A + +S V A + N Y + E R
Sbjct: 111 PGPARDILRDAVVQLGDSGGTGSVLAILGLLAALWSASGYVAAFIRASNAVYDLPEGRPV 170
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + + + L + + + V + + + + +L
Sbjct: 171 WKLTPLRLALTVTLMLMLAVSALIVVFTGPLAERAGRAVGFGDAAIALWGVTKWPVLLLL 230
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P + + I PG + + WV + F Y F +Y+ Y LA
Sbjct: 231 VVVMIGLLYWAAPNVRGRGFRWISPGSVVATLVWVAASAGFAVYAANFGSYNKTYGTLAG 290
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ LV+L++ + +LG E +A +
Sbjct: 291 AIVFLVWLWLTNLAILLGLEFDAELARER 319
>gi|192289850|ref|YP_001990455.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
gi|192283599|gb|ACE99979.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
Length = 317
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 10/273 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I ++ + +A+ + LL++FP I + + + +
Sbjct: 42 IAGGTYRRIGDDRLFLVAAGVVFYWLLALFPAITALVSSYALFADAATIGDHLAQLSSIV 101
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I +++ +VLA L F IS A + ++ GV+A+ +LN Y V E R
Sbjct: 102 PAGTYSVIEEQVGRVLANGEAKLGLAFLISLSLALWSANGGVKAIIDALNAVYDVEEQRG 161
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-IWNGRIYATM 186
++ S L A ++ + +A P+ LA + LGNL+ + I GR
Sbjct: 162 FFKLNGFSLLLTLGALGAVLAAIGLVIAAPIVLARI-----GLGNLVAVAIDYGRWPVLA 216
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L F GL ++ P S + PG I +SW+ G+ ++Y+ F+ Y+ Y L
Sbjct: 217 LMTFGGLSLLYRIAPNRPSPPWRWVAPGSIVAALSWLAGSAALSYYLANFADYNATYGSL 276
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + +++++M + + G ELNA + R
Sbjct: 277 GAAIGLMIWMWMTAIVVLAGGELNAEIEAGAGR 309
>gi|15893776|ref|NP_347125.1| tRNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|15023345|gb|AAK78465.1|AE007563_5 TRNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|325507899|gb|ADZ19535.1| TRNA-processing ribonuclease BN [Clostridium acetobutylicum EA
2018]
Length = 283
Score = 189 bits (481), Expect = 4e-46, Method: Composition-based stats.
Identities = 57/282 (20%), Positives = 128/282 (45%), Gaps = 6/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + + I+ +++ A++S ++ S + + FPF++F L GF
Sbjct: 1 MSAKLLRIKNYVSVFIKRLIDDGIIALSSQLAYSLIFAFFPFLIFLMTLVGFSSIKS--S 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V++ + P + + + + +V+ L ++S + + + +G A+ LN +Y
Sbjct: 59 DVLEAMRKVVPYQVYGLVKNIVKEVVDTKNGKLLSVSLITSIWSCVSGFNAVIRGLNNSY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN- 179
+ E RS+ +LIS + +T+ + V + + K F +W+
Sbjct: 119 KDNERRSFLKVQLISIIFTFGLIITIFFAMLLIVFGDINEELIIKKFGINEFFGYGVWDL 178
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + + ++ + PA K K + PG + + + WV+ ++ FT+Y+ F YS
Sbjct: 179 IKYGILTIGMIFSFAALYRYTPANKHKWKMVFPGAVISALGWVISSICFTYYVNNFGNYS 238
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+Y + +++ + +L+++ I G E+NA +Y+ K P
Sbjct: 239 KVYGSIGAVIVLMTWLFIISFIIICGGEINA---VYFEIKNP 277
>gi|328957860|ref|YP_004375246.1| putative ribonuclease [Carnobacterium sp. 17-4]
gi|328674184|gb|AEB30230.1| putative ribonuclease [Carnobacterium sp. 17-4]
Length = 319
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 131/274 (47%), Gaps = 2/274 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
E +V I+ + E + W + IS LLS+FP +V +N+ +L +
Sbjct: 16 EIIRVVKKFGVILIQKYREAEVWNSGAIISYYLLLSIFPVMVVVSNVLPYLRLD--AAEL 73
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + A P + + ++ + + G+ +I+ + A + SS G+ A+++S+N+AY V
Sbjct: 74 LPYIENAVPTYFFHQLENLLMNWFSKSSGGILSIAVIGALWSSSRGMNAMQVSMNKAYGV 133
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R+ I RL S + ++++ +F L L Y+ F + + R
Sbjct: 134 EPRRNIVIIRLFSLILTTSLILCIMVLVIIFGFGQLILEYITPVFELPLMISETFQSLRW 193
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T+ LFI ++ F+P AK + S+LPG + I W++ + +F Y+ F+ + Y
Sbjct: 194 PVTVSVLFIIFCVLYYFVPHAKVTLKSVLPGAAISTIGWMLVSQVFAIYVEYFAFGAKTY 253
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + M L++L ++G GA +NAS+ +Y
Sbjct: 254 GTIGTFMIMLIWLQVIGSLMTAGAVINASIEVYQ 287
>gi|302556884|ref|ZP_07309226.1| ribonuclease BN [Streptomyces griseoflavus Tu4000]
gi|302474502|gb|EFL37595.1| ribonuclease BN [Streptomyces griseoflavus Tu4000]
Length = 320
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 111/269 (41%), Gaps = 6/269 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ ++ F +++ A+ ++ +LS+FP ++ ++ G G V++ + P
Sbjct: 21 LKGSLREFKDDELTDRAAALTYYGVLSLFPALLALVSVLGLTG-RSTTDKVLENLQDLAP 79
Query: 72 EVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
IT + Q+ G + L A + +S V A S N Y V E R +
Sbjct: 80 GSARDIITQAVRQLQDNAGVGSLMAVVGLLLAVWSASGYVAAFIRSANAVYDVPEGRPVW 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+ FG + V V+ + + V LG+ L +W+ + +L
Sbjct: 140 KVLPVRFGVTVALLVLAVLSALIVVFTGGLARRAGDAL-GLGDTALTVWSIAKWPVLVLL 198
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P AK + I PG W+V + F Y+ F +Y+ Y +A
Sbjct: 199 VVVMIALLYWAAPNAKVRGFRWITPGSFLALAIWLVASAGFAFYVANFGSYNKTYGTMAG 258
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ L++L++ + +LG E +A +
Sbjct: 259 VIVFLIWLWITNLAILLGLEFDAEIARQR 287
>gi|294497189|ref|YP_003560889.1| YihY family protein [Bacillus megaterium QM B1551]
gi|294347126|gb|ADE67455.1| YihY family protein [Bacillus megaterium QM B1551]
Length = 279
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 122/266 (45%), Gaps = 2/266 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + ++ ++++ ++ LLS+FPF++F L GFL ++D+V P+
Sbjct: 14 KELMGRIHRDELPSLSAELAYYLLLSLFPFLIFLITLIGFLPLEST--DLLDLVENVAPQ 71
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + ++ + L + +A + +SNG+ A+ + NRAY V E R + + R
Sbjct: 72 QTLHMIESNVSHIIGSHNEKLLSFGIIATMWSASNGINAIVRAFNRAYHVQENRPFLVAR 131
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
++ +++ + V + Y+ F L + R + L LF
Sbjct: 132 GMAVLLTFAMIFVIIVALLLPVFGHMIGLYLSSTFGFSETFLALWSASRWIISGLILFTV 191
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ F P K I +++ G F + W V ++LF +Y+ F+ Y+ Y L I+ L
Sbjct: 192 FTGLYYFAPNKKLLIRNVVKGAAFATVGWTVVSMLFAYYVNHFNNYTATYGSLGGIIILL 251
Query: 253 VFLYMLGVFFILGAELNASMIIYYWR 278
++LY+ G+ ++G E+NA +
Sbjct: 252 IWLYLSGMIIVIGGEINAIFYDRRVK 277
>gi|295702560|ref|YP_003595635.1| YihY family protein [Bacillus megaterium DSM 319]
gi|294800219|gb|ADF37285.1| YihY family protein [Bacillus megaterium DSM 319]
Length = 279
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 124/275 (45%), Gaps = 2/275 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
Y + + + ++ ++++ ++ LLS+FPF++F L GFL ++
Sbjct: 5 YINNIVRFGKELMGRIHRDELPSLSAELAYYLLLSLFPFLIFLITLIGFLPLEST--DLL 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D+V P+ I + ++ + L + +A + +SNG+ A+ + NRAY V
Sbjct: 63 DLVENVAPQQTLHMIESNVSHIIGSHNEKLLSFGIIATMWSASNGINAIVRAFNRAYHVQ 122
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + R ++ +++ + V + Y+ F L + R
Sbjct: 123 ENRPFLVARGMAVLLTFAMIFVIIVALLLPVFGHMIGLYLSSTFGFSETFLALWSASRWI 182
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L LF ++ F P K I +++ G F + W V ++LF +Y+ F+ Y+ Y
Sbjct: 183 ISGLILFTVFTGLYYFAPNKKLLIRNVVKGAAFATVGWTVVSMLFAYYVNHFNNYTATYG 242
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L I+ L++LY+ G+ ++G E+NA +
Sbjct: 243 SLGGIIILLIWLYLSGMIIVIGGEINAIFYDRRVK 277
>gi|21283552|ref|NP_646640.1| hypothetical protein MW1823 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486701|ref|YP_043922.1| hypothetical protein SAS1805 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297208908|ref|ZP_06925313.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300913034|ref|ZP_07130472.1| YihY family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|21204993|dbj|BAB95688.1| MW1823 [Staphylococcus aureus subsp. aureus MW2]
gi|49245144|emb|CAG43610.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296886469|gb|EFH25397.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300885812|gb|EFK81019.1| YihY family protein [Staphylococcus aureus subsp. aureus TCH70]
Length = 403
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 70 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 126
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 127 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 186
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 187 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 246
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 247 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 306
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 307 ILLLWLYITSFIIIVGAEINAII 329
>gi|108763366|ref|YP_632756.1| YihY family protein [Myxococcus xanthus DK 1622]
gi|108467246|gb|ABF92431.1| YihY family protein [Myxococcus xanthus DK 1622]
Length = 359
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 6/257 (2%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ + ++ +A ++ +L++FPF++F +LAG L +I + P +
Sbjct: 19 DEWTRDEVGDVAGALTFRMILALFPFLLFLVSLAGLLIEPAQAQVLIQELARVAPREVTS 78
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+++ I + GL T+ + A + +S GV AL +LN+ Y V E R + R I+
Sbjct: 79 ILSERIEALANSRPVGLLTVGGVGAVWAASAGVVALMTALNKVYGVTESRPIWKLRGIAL 138
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
L + ++ +F + P+ K LG +L+ + R+ L + +
Sbjct: 139 LVTLGGAAVAILAAFAVIVTPVI---AGKLPGGLGTVLMWL---RLPVAGLLMMFLWAVL 192
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ LP K I PG + + WV + F+ Y+ F Y Y + ++ L++++
Sbjct: 193 YYVLPDVNQKFRFITPGSVVGVLIWVFASWGFSQYVANFGKYDVNYGAIGGVIVMLLWMW 252
Query: 257 MLGVFFILGAELNASMI 273
+ +LGAE+NA +
Sbjct: 253 ISAQVILLGAEINAILE 269
>gi|126729991|ref|ZP_01745803.1| ribonuclease BN, putative [Sagittula stellata E-37]
gi|126709371|gb|EBA08425.1| ribonuclease BN, putative [Sagittula stellata E-37]
Length = 322
Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 59/279 (21%), Positives = 118/279 (42%), Gaps = 8/279 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + D+ +++ +A+ I+ ALLS+FP I LAG F+ D
Sbjct: 15 FKGLLDVGVRVWRVQNDDNLGLLAAGIAFYALLSLFPGITAAVALAGLFTDPSFMVETSD 74
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYR 121
+ P + + ++ +V+ + L +S A + +S + I LN Y
Sbjct: 75 ALADVVPTAAEEIMLGQLREVVTTSSSSLGWAVLLSIGLALFSASRATQNFIIGLNVIYG 134
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R + RL++ L + LVI + A+P A +++ + ++ R
Sbjct: 135 EKERRGFIKLRLLNIALTLGLIIGLVIAIAIVAAMPAAASFISNR----TWVTDLVLYLR 190
Query: 182 IYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ G+ FV P+ + ++ + PG + WV+G++ F+ Y+ +F TY+
Sbjct: 191 WPVLFIVGAFGIAFVFRVGPSRRYARWRWLTPGALLACALWVIGSIGFSRYVASFGTYNE 250
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L ++ L +L++ +LGA ++A +
Sbjct: 251 TFGALGGVIVLLTWLWLTAYIVLLGAAVDAELEAQTRHD 289
>gi|119469197|ref|ZP_01612181.1| putative ribonuclease protein [Alteromonadales bacterium TW-7]
gi|119447449|gb|EAW28717.1| putative ribonuclease protein [Alteromonadales bacterium TW-7]
Length = 317
Score = 188 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 111/267 (41%), Gaps = 8/267 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI +++ +++ ++ ALL++FP I ++ + + + +
Sbjct: 22 WDIAKRIFARMSKDNLSLVSAGVAFYALLAIFPAIAALVSIYAYFASPAEISEHLRQFTT 81
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAA---AYFSSNGVEALRISLNRAYRVVEM 125
P + I +I ++ L + + SS G +AL + N +Y E
Sbjct: 82 LIPNSSRELILSQISELTQSSQARLTLGALGTLLLTIWSSSKGSQALITACNISYHEYEK 141
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ + + F + + A + + + +P+ L V ++ L+I
Sbjct: 142 RSFLRAQFVRFMFSVGAILVAIFALLIIGILPIVLNLVGLK----DSIDLLIKVVSWPIL 197
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L+ ++ + P K+ K I G + W++ ++ F+ Y+ FS+Y+ Y
Sbjct: 198 ALKFNFALVLLYRYAPHRKAAKWRWITLGSAIATVFWIIASIGFSFYVSRFSSYNETYGS 257
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
L ++ L++LY+ +GA +NA
Sbjct: 258 LGGVVIMLMWLYISAYIVTMGAVINAE 284
>gi|323138225|ref|ZP_08073297.1| ribonuclease BN [Methylocystis sp. ATCC 49242]
gi|322396477|gb|EFX99006.1| ribonuclease BN [Methylocystis sp. ATCC 49242]
Length = 281
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 108/269 (40%), Positives = 156/269 (57%), Gaps = 2/269 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ YDA F +DGWA+ASHI+LS L ++FPF++F LAGF G + ++
Sbjct: 2 FLLRPFYDAYLKFERDDGWAIASHIALSTLTALFPFLIFITALAGFFGRQEVADAAAKII 61
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F AWP IA P++ E+ VL P G+ TI A+ YF+S+GVEALR++LNRAY + R
Sbjct: 62 FEAWPPRIAGPLSAEVQSVLTEPRHGMATIGAVLGIYFASSGVEALRVALNRAYDARDQR 121
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW-NGRIYAT 185
W+ RL + +V + + +L+ + F+ V PLA A + PAL + L ++ R T
Sbjct: 122 PWWWLRLEAIVFVFIGAASLLAIGFLLVLAPLARAIATQHAPALMHELEPLYAPVRYGVT 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAG 244
+ + L+ H+FLPA + + I+PG T ++ + LF Y+ F +Y + YAG
Sbjct: 182 TAVVSVALLAAHVFLPAGQRPLARIVPGFALTLLASLACGALFGAYLAEFAGSYVSTYAG 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
LASIM LVFLY L V FI GAELN +
Sbjct: 242 LASIMMALVFLYSLAVIFIYGAELNQVIA 270
>gi|255283321|ref|ZP_05347876.1| YihY family protein [Bryantella formatexigens DSM 14469]
gi|255266175|gb|EET59380.1| YihY family protein [Bryantella formatexigens DSM 14469]
Length = 310
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 3/271 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
E F + + + ++ A A+ +L ++ FPF + L + V
Sbjct: 32 ERFWKFYKLFRRFMRKMKKDRVDAFAAQSALFIIMGFFPFFMLLLTLIQYTPLTS--DMV 89
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+D++ P I + ++ + + L + + +AA + ++ V A+ LN V
Sbjct: 90 MDLLMEILPSSFYDLIAGIVEELFS-SSTALLSGTVIAALWAAARSVLAITNGLNSVRGV 148
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R++ RL S Y+L +V+ + + L ++FP LG+ +I R
Sbjct: 149 EENRNYVFMRLRSGLYILFLIFAIVLACILLLFGNLLQNTAFQYFPVLGSFTGMIVLVRA 208
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ML L + + ++ LP K KI+ +PG +F +W + + F+ Y S +++Y
Sbjct: 209 VISMLVLSLVFLAMYCSLPNCKIKIIRQIPGAVFAASAWAIYSYGFSLYFDYASHSTSIY 268
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
L +++ +++LY GAE+N +
Sbjct: 269 GSLTTVVMIMLWLYFCMWLLFAGAEVNCYLE 299
>gi|256847880|ref|ZP_05553325.1| ribonuclease BN [Lactobacillus coleohominis 101-4-CHN]
gi|256715569|gb|EEU30545.1| ribonuclease BN [Lactobacillus coleohominis 101-4-CHN]
Length = 296
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 129/277 (46%), Gaps = 2/277 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M E + + HF A A+ ++ +LLS+FP I+ NL +G
Sbjct: 1 MEERRGKIKQFLAVFFHHFQMAQVSASAAVLAYYSLLSIFPAILVVGNLLPMIGID--AN 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A PE + I + L + G+ T A+ A + +S G+ A + S+N AY
Sbjct: 59 TVLGYLQTAVPESVFAFIKPIVYDFLRHGSGGILTTGAVIALWSTSQGIAAFQRSVNHAY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E ++ I R +SF ++L+ + L +M+ + L ++ F + +
Sbjct: 119 GVAENQNPIINRTVSFIWMLVVILILFLMALTYGIGEDLLQSLQPIFRFNTSYIKTFAQL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T +LFI L ++ F+P A+ ++ ++ G + + W+ + +F+ Y S T
Sbjct: 179 KWPVTFFSLFIALTLLYYFVPNARVRLRYVVVGAVIVALLWMGLSRVFSMYAQLLSRRVT 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L G+ ++GA +NA++ +
Sbjct: 239 SYKTIGAFIAMMIWLDFSGMLVMIGATINATLQEEHE 275
>gi|298695221|gb|ADI98443.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 405
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|282917228|ref|ZP_06324983.1| hypothetical protein SATG_01802 [Staphylococcus aureus subsp.
aureus D139]
gi|282318855|gb|EFB49210.1| hypothetical protein SATG_01802 [Staphylococcus aureus subsp.
aureus D139]
Length = 405
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|241113097|ref|YP_002972932.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240861305|gb|ACS58971.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 359
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 124/273 (45%), Gaps = 8/273 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + D+ + + + +A+ ++ LL++FP + +L G + + +
Sbjct: 60 FSGLRDVFWRVFHEVLADRVTLIAAGVTFYLLLALFPAMAALVSLYGLVADPTTISEHLR 119
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYR 121
+ G P I ++I +++ L F + A + + +G A+ ++N AY
Sbjct: 120 ELAGLMPSGAFDLIANQIKELVGRRDATLGVTFFVGLGIALWSTHSGTLAIFDAMNVAYE 179
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R LI + L A + V+M + +P+ L+Y+ + + ++
Sbjct: 180 EEEKRGLIRLNLIGLCFTLCAMLLTVVMVVLVGVMPVILSYL--WLDQFKEHMALLMRWP 237
Query: 182 IYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++A + V+ F P+ + +K+ + G + T I+W ++ F+ Y+ F+ Y+
Sbjct: 238 LLLLVVAAAVTS--VYRFGPSREPAKLRWMTWGAVLTTIAWAAMSLGFSFYLDHFANYNA 295
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y L +++ L+++++ V I+G ELNA +
Sbjct: 296 TYGTLGALIGFLIWIWLSVVILIVGGELNAELE 328
>gi|257426015|ref|ZP_05602437.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428688|ref|ZP_05605083.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431298|ref|ZP_05607674.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 68-397]
gi|257434016|ref|ZP_05610367.1| ribonuclease BN [Staphylococcus aureus subsp. aureus E1410]
gi|257436920|ref|ZP_05612962.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282904514|ref|ZP_06312399.1| YihY family protein [Staphylococcus aureus subsp. aureus C160]
gi|282906286|ref|ZP_06314138.1| ribonuclease BN [Staphylococcus aureus subsp. aureus Btn1260]
gi|282909202|ref|ZP_06317018.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282914680|ref|ZP_06322465.1| YihY family protein [Staphylococcus aureus subsp. aureus M899]
gi|282919717|ref|ZP_06327449.1| hypothetical protein SASG_02334 [Staphylococcus aureus subsp.
aureus C427]
gi|282925121|ref|ZP_06332781.1| hypothetical protein SARG_02410 [Staphylococcus aureus subsp.
aureus C101]
gi|283958644|ref|ZP_06376090.1| YihY family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293507757|ref|ZP_06667599.1| hypothetical protein SCAG_02273 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510775|ref|ZP_06669477.1| ribonuclease BN [Staphylococcus aureus subsp. aureus M809]
gi|293539314|ref|ZP_06671993.1| YihY family protein [Staphylococcus aureus subsp. aureus M1015]
gi|297590065|ref|ZP_06948705.1| YihY family protein [Staphylococcus aureus subsp. aureus MN8]
gi|257271158|gb|EEV03315.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274332|gb|EEV05844.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 65-1322]
gi|257277947|gb|EEV08603.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 68-397]
gi|257280942|gb|EEV11086.1| ribonuclease BN [Staphylococcus aureus subsp. aureus E1410]
gi|257283709|gb|EEV13834.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282313079|gb|EFB43477.1| hypothetical protein SARG_02410 [Staphylococcus aureus subsp.
aureus C101]
gi|282316355|gb|EFB46732.1| hypothetical protein SASG_02334 [Staphylococcus aureus subsp.
aureus C427]
gi|282321394|gb|EFB51720.1| YihY family protein [Staphylococcus aureus subsp. aureus M899]
gi|282326770|gb|EFB57067.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330483|gb|EFB60000.1| ribonuclease BN [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595070|gb|EFC00037.1| YihY family protein [Staphylococcus aureus subsp. aureus C160]
gi|283471153|emb|CAQ50364.1| transporter [Staphylococcus aureus subsp. aureus ST398]
gi|283789684|gb|EFC28506.1| YihY family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919849|gb|EFD96918.1| YihY family protein [Staphylococcus aureus subsp. aureus M1015]
gi|291094820|gb|EFE25088.1| hypothetical protein SCAG_02273 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466406|gb|EFF08930.1| ribonuclease BN [Staphylococcus aureus subsp. aureus M809]
gi|297577193|gb|EFH95907.1| YihY family protein [Staphylococcus aureus subsp. aureus MN8]
gi|323439155|gb|EGA96883.1| ribonuclease BN, putative [Staphylococcus aureus O11]
gi|323441561|gb|EGA99211.1| ribonuclease BN, putative [Staphylococcus aureus O46]
Length = 405
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|282911508|ref|ZP_06319308.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WBG10049]
gi|282324517|gb|EFB54829.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WBG10049]
gi|312437652|gb|ADQ76723.1| YihY family protein [Staphylococcus aureus subsp. aureus TCH60]
Length = 405
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|195977831|ref|YP_002123075.1| methionine aminopeptidase Map [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974536|gb|ACG62062.1| methionine aminopeptidase Map [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 599
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 59/274 (21%), Positives = 115/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I + HF + A ++ +L+ FP IV AN+ +L + ++ ++
Sbjct: 303 YEPIQAFMRHFQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--ISDLLRLMKE 360
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + + ++ + + P+ G+ I+ L + S + +L+ + N+AY E R +
Sbjct: 361 QLPKDIYRSASSIVVNIFSKPSGGVLGIATLTGLWTMSRSLASLQKAFNKAYDASEHRDF 420
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L+ LL L A+ + + + N+ + T+L
Sbjct: 421 LLGHLVGLLTSLLILFLLTFALIFSTFSKAAIQVLDRHYHLNDNITTLFLFLIQPITILI 480
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+FIGL+ ++ LP K KI ILPG FT + + + +Y+V S
Sbjct: 481 IFIGLMLLYFLLPNIKIKKIRYILPGTFFTTFVMIFLSNMVGNYVVHNVERMVDIKTFGS 540
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+M +++ L I+GA NA+ K
Sbjct: 541 VMVFIIMLWFIFLARILIMGAVFNATYQELSIGK 574
>gi|158316017|ref|YP_001508525.1| putative ribonuclease BN [Frankia sp. EAN1pec]
gi|158111422|gb|ABW13619.1| putative ribonuclease BN [Frankia sp. EAN1pec]
Length = 420
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 106/273 (38%), Gaps = 4/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F ++ + F +D A+ ++ +L++FP ++ +L G Q +V++
Sbjct: 93 LRSWFWVLVRTVREFRRDDLPDRAAALTYYGVLAIFPALLVLVSLLGV-VGRQATDSVLE 151
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA--YFSSNGVEALRISLNRAYRV 122
+ P + D + + P AA + +S + A + N Y +
Sbjct: 152 NLQELTPGSARDIVHDAVTGLRDAPGTSGLLAVLGLAAALWSASGYIAAFIRAANAIYDM 211
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R + + +L V L + + V V + ++ + +
Sbjct: 212 PEGRPVWKVAPLRLAVTVLLMVLLAGSAVIVVFSGGLARQVGRMIGLDDAMITLWSVAKW 271
Query: 183 YATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + + ++ P A+ + + PG + + W+ + F Y+ F +Y+
Sbjct: 272 PVLVLFVVVMIALLYWSTPNARVRGFRWMTPGSLLAVLIWLAASAAFAFYVSNFGSYNKT 331
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y LA ++ LV+L++ + +LG E + +
Sbjct: 332 YGALAGVIVFLVWLWLSNLAILLGLEFDTEIAR 364
>gi|212638170|ref|YP_002314690.1| ribonuclease BN-like family enzyme [Anoxybacillus flavithermus WK1]
gi|212559650|gb|ACJ32705.1| Ribonuclease BN-like family enzyme [Anoxybacillus flavithermus WK1]
Length = 277
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 126/264 (47%), Gaps = 2/264 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I F ++ + ++ F E++ + +++ ++ LLS+FPF++F +L VI
Sbjct: 3 ISFSVVRELMKRFDEDEIFDLSAELAYFFLLSLFPFLLFLLTFLSYLPIPH--EDVIAFF 60
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P A I + Q++ + + S LA + +SNG+ A+ +LNRAY V E R
Sbjct: 61 SQYAPSETAHLIETNVKQLMESQSGKWLSFSVLATVWAASNGMSAIIRALNRAYDVKETR 120
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+++ R +S +++ V + ++ F L + R + +
Sbjct: 121 SFFVARGVSILLTFAMIFVIIVALIFPVFGKMIGTFLFSAFGLSDVFLHVWETIRWFVSF 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ LF +++F P+ + + G +F + W++ ++ F+ Y+ F YS MY L
Sbjct: 181 VILFFVFSVLYVFAPSKYVRFRDVWSGALFATVGWMIVSLAFSSYVNQFGNYSAMYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
I+ +V+ Y+ G+ +LG ELNA
Sbjct: 241 GIIALMVWFYLSGMMIVLGGELNA 264
>gi|253734428|ref|ZP_04868593.1| ribonuclease BN [Staphylococcus aureus subsp. aureus TCH130]
gi|253727581|gb|EES96310.1| ribonuclease BN [Staphylococcus aureus subsp. aureus TCH130]
gi|329731512|gb|EGG67875.1| YihY family protein [Staphylococcus aureus subsp. aureus 21193]
Length = 405
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|255523128|ref|ZP_05390100.1| ribonuclease BN [Clostridium carboxidivorans P7]
gi|255513243|gb|EET89511.1| ribonuclease BN [Clostridium carboxidivorans P7]
Length = 275
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 123/265 (46%), Gaps = 2/265 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ D I F +D A+ S ++ + +LS FPFI+F L G + ++ +
Sbjct: 1 MKRLLLDLIYRFNNDDIPALGSQLAYNLVLSFFPFIIFLMTLIGHTSLNN--NEILLALS 58
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I+ + +V+ L + S + + +S+G + LN+AY V E RS
Sbjct: 59 KIMPASAFNLISTTVSEVITTKHSQLMSFSLILTIWSASSGFTGIIKGLNKAYGVPESRS 118
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ R+IS + + ++IM F+ + + Y L+++ R + +
Sbjct: 119 FIKVRIISILCTIGMAFIILIMMFLLILGHIIWKYTAYKLSFAHRLIILWTLTRYFIFIS 178
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ + P + + +LPG +F + ++ + F +Y+ F+ YS +Y + +
Sbjct: 179 TAVFIFTSLYRYAPCKRLTWLEVLPGSLFAILHLILVSTGFAYYVNNFANYSVIYGSIGA 238
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L +L+++ + ILG E NAS+
Sbjct: 239 IIVLLTWLFLISIIVILGGEFNASL 263
>gi|225181231|ref|ZP_03734676.1| ribonuclease BN [Dethiobacter alkaliphilus AHT 1]
gi|225168011|gb|EEG76817.1| ribonuclease BN [Dethiobacter alkaliphilus AHT 1]
Length = 281
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 117/265 (44%), Gaps = 2/265 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I E + A + +S +LS+FPF++F L + Q +D +
Sbjct: 4 ILSFIKQLYLRIQENETTARGAQLSYFFILSIFPFLIFLITLIDYTPLSQ--QHTLDQLA 61
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + + +V A L ++ L + +S G AL SLN+AY + E RS
Sbjct: 62 LLLPDNAFAIVEQIVSEVEAADNFTLLSLGILGTIWTASRGTAALIKSLNKAYDITESRS 121
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+++ I L ++ ++ V + ++ G + R +L
Sbjct: 122 FFVLNTIGIAATLALALLILFTLSFLVFGQVIGELAFQYLGLEGLFQALWPVLRFSIPLL 181
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ + L+ P + ++ + PG IF+ ++W++ + F Y+ F +S Y +
Sbjct: 182 IIFVSFTLLFLYSPNCRLRLRHVYPGAIFSTLAWIIASQAFAFYVNNFGNFSRTYGSIGG 241
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ +++LY+ V +LG E+NA++
Sbjct: 242 IIVFMIWLYLSSVVVLLGGEINATL 266
>gi|82751536|ref|YP_417277.1| hypothetical protein SAB1815 [Staphylococcus aureus RF122]
gi|82657067|emb|CAI81504.1| probable membrane protein [Staphylococcus aureus RF122]
Length = 405
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|258422960|ref|ZP_05685859.1| ribonuclease BN [Staphylococcus aureus A9635]
gi|257846747|gb|EEV70762.1| ribonuclease BN [Staphylococcus aureus A9635]
Length = 405
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|251799250|ref|YP_003013981.1| ribonuclease BN [Paenibacillus sp. JDR-2]
gi|247546876|gb|ACT03895.1| ribonuclease BN [Paenibacillus sp. JDR-2]
Length = 296
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 61/263 (23%), Positives = 124/263 (47%), Gaps = 2/263 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ F ++D A+ + ++ +LS FPF++F +L F+ +V+ +
Sbjct: 10 FFKNLYSRFRDDDVPALGAQLTYYFILSFFPFLIFVVSLMSFVQLSG--DSVVAELIRLL 67
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + I + V+ L +I +A + +SNGV A+ +N+AY V E R ++
Sbjct: 68 PEQTGEAIQSILQDVMNNSRVTLLSIGMIATLWSASNGVNAIIKGVNKAYDVEENRPFWK 127
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R IS L+ ++ +++ + + + ++ +F + + LI + + +
Sbjct: 128 VRAISLAATLVLALAILLAIVLLIFGEVIGEFLFDWFDSPVSFELIWGILKYVFPISFML 187
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ +P K + ++ PG +F W+ ++LF YI F YS Y + I+
Sbjct: 188 VVFSLLYWIVPNHKIRFKTVFPGALFATFGWIASSLLFQFYINNFGNYSKTYGSIGGIII 247
Query: 251 CLVFLYMLGVFFILGAELNASMI 273
L++LY+ ILG E+NA++
Sbjct: 248 LLIWLYISSNIIILGGEVNATLA 270
>gi|284024929|ref|ZP_06379327.1| hypothetical protein Saura13_10091 [Staphylococcus aureus subsp.
aureus 132]
Length = 405
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISIFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|283771032|ref|ZP_06343923.1| ribonuclease BN [Staphylococcus aureus subsp. aureus H19]
gi|283459626|gb|EFC06717.1| ribonuclease BN [Staphylococcus aureus subsp. aureus H19]
Length = 405
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|330977867|gb|EGH77770.1| ribonuclease BN [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 283
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 1/227 (0%)
Query: 47 ANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS 106
L GFL F + P + + I Q L GL +I + A + +S
Sbjct: 12 IALIGFLHLPDFFSWLRLQSEFLLPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTAS 70
Query: 107 NGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
GV + ++N AY VVE R + +S Y + + L+ + V P + ++
Sbjct: 71 AGVRLMMSAMNAAYDVVEGRPIWKRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQ 130
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
++ + R A ++ L + + ++ +P K + I PG + + W+ ++
Sbjct: 131 IGMEDFIVTLWTILRWPAIIILLMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIFASL 190
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
F Y+ TF+ Y+ MY + +I+ L++ Y+ +LGAE+NA +
Sbjct: 191 AFGFYVKTFADYNAMYGSIGAIIVLLLYFYISAAVLLLGAEMNAVIE 237
>gi|239631810|ref|ZP_04674841.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|239526275|gb|EEQ65276.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 308
Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ AI E + A+ ++ LLS+FP I+F AN + G + + A
Sbjct: 15 FVKLAINRITESNIGQSAAALAYYTLLSLFPLILFVANALPYFGL--TYKGLAAYLTQAI 72
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + I +L + GL I A+A + +S GV L++ N+ Y V +++ I
Sbjct: 73 PSNVMNWLDPVIANLLDSSSGGLLGIGAVATLWAASLGVNGLKMGFNQIYGVESSQNFII 132
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL+S + + + VF L ++ + L R T+ ALF
Sbjct: 133 QRLLSMLMTFTLIIVMGAILIVFAFGRQFLEWLIPLLRLNDDWLRTFNTLRWPVTITALF 192
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++F++ FLP K ++ ++LPG FT W++ A F+ Y+ F T Y + + +
Sbjct: 193 VIIMFLNYFLPNVKIRMWTVLPGTAFTVAGWLLIAQAFSLYMKYFGTRYLSYGTIGTFIA 252
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++L + + GA +NA Y+ +
Sbjct: 253 IMLWLNFSALVLLWGAVINALTAEYFIGR 281
>gi|302333548|gb|ADL23741.1| putative membrane protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 405
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|84501469|ref|ZP_00999674.1| Ribonuclease BN family protein [Oceanicola batsensis HTCC2597]
gi|84390760|gb|EAQ03248.1| Ribonuclease BN family protein [Oceanicola batsensis HTCC2597]
Length = 315
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 106/266 (39%), Gaps = 8/266 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ + + + ++ LL++FP I LAG V I+ +
Sbjct: 24 DILLRVWAEMGRDHIGLIGAGVAFYGLLALFPAITALMALAGLTFDASQVTAQIESISQF 83
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE A I D+ + V GL + A + +S GV +L +N AY E R
Sbjct: 84 VPEAAADIIIDQAVAVTGSQDGGLGLAAILGFALAIWAASKGVGSLMEGINIAYDETETR 143
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L G L +V + +P L+ + L+I R A +
Sbjct: 144 GFVRLTLTRLGLTLFLVFGMVAGLGATIVLPSILSLINLG----ATTELLIGLARWIALL 199
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
G+ ++ P K + ++PG + + W+ + F Y+ F +Y + L
Sbjct: 200 AMTVAGITVLYRVAPDRKDATWSWLVPGAVLATLLWIGASAAFAIYVQNFGSYQETFGTL 259
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ L++L++ +LGAELNA
Sbjct: 260 AGVVILLMWLWISAYVILLGAELNAE 285
>gi|256824738|ref|YP_003148698.1| hypothetical protein Ksed_08810 [Kytococcus sedentarius DSM 20547]
gi|256688131|gb|ACV05933.1| predicted membrane protein [Kytococcus sedentarius DSM 20547]
Length = 417
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 112/275 (40%), Gaps = 5/275 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT---VIDVVF 67
+ A+ F ++ +A+ ++ A+LS+FP I+ +L G G + I V
Sbjct: 92 VARRALYEFTDDGCTDLAAGLTYFAVLSIFPAIIGLVSLLGVFGQGESTTQAFLQIAVDL 151
Query: 68 GAWPEVI-AKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
GA P+ I D I Q + A + L A + +SN V +NR Y V E
Sbjct: 152 GADPQSTGYTFIEDFITKQQESSGAGLALALGLLGALWSASNYVNGFSRMMNRIYEVPEG 211
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +++ R + +L + + ++ FV V I + A
Sbjct: 212 RPFWVLRPVMVLVTVLVLLLVAVLGLSFVLTGPVAESVFGVVGLGDLATTIWAWAKWPAA 271
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ P K + PG I ++ WV+ + F YI F Y Y +
Sbjct: 272 ALIVIFIIRLLYWATPNVKLPRQILTPGAILAFLIWVLASAAFGFYIANFGNYDATYGSM 331
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A ++ L++L++ +LGAE++A K+
Sbjct: 332 AGVIVFLLWLWLTNTVLLLGAEIDAEAERMRELKR 366
>gi|325103819|ref|YP_004273473.1| ribonuclease BN [Pedobacter saltans DSM 12145]
gi|324972667|gb|ADY51651.1| ribonuclease BN [Pedobacter saltans DSM 12145]
Length = 332
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 58/272 (21%), Positives = 123/272 (45%), Gaps = 2/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ + + +E AS ++ + L++VFP I+F L ++ F ++ ++
Sbjct: 34 LYTVATFFFQEIGKESLVNKASSLAYNFLMAVFPAIIFLFTLIPYIPIKNFQNQLMAIIA 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE K D + ++ L +I L A +F++NG+ L + N++ +VE R+
Sbjct: 94 LLLPENAYKAFEDTLEDIVKNQNGKLLSIGFLLALFFATNGIHTLMQAFNKSSLIVETRT 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN--LLLIIWNGRIYAT 185
W RL++ +L ++++ + V L R+ N + +I GR
Sbjct: 154 WLKQRLVAMNLTVLTIFSIILGVSITVITEFILNTFREELNFENNKFWIFLITIGRWIII 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ F ++ + PA K PG + ++ + FT +I F Y+ +Y +
Sbjct: 214 VCVYFFTTSLLYRYGPANAKKWKLFSPGAWLATVLAILTTLGFTFFINNFGAYNKLYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ +++LY+ + ++G ELNAS+ +
Sbjct: 274 GTLLVVMIWLYLNSLILLIGFELNASLELSKR 305
>gi|148544597|ref|YP_001271967.1| ribonuclease BN [Lactobacillus reuteri DSM 20016]
gi|184153955|ref|YP_001842296.1| hypothetical protein LAR_1300 [Lactobacillus reuteri JCM 1112]
gi|227363716|ref|ZP_03847825.1| possible ribonuclease BN [Lactobacillus reuteri MM2-3]
gi|325682926|ref|ZP_08162442.1| YihY family protein [Lactobacillus reuteri MM4-1A]
gi|148531631|gb|ABQ83630.1| putative ribonuclease BN [Lactobacillus reuteri DSM 20016]
gi|183225299|dbj|BAG25816.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227071210|gb|EEI09524.1| possible ribonuclease BN [Lactobacillus reuteri MM2-3]
gi|324977276|gb|EGC14227.1| YihY family protein [Lactobacillus reuteri MM4-1A]
Length = 296
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 68/277 (24%), Positives = 127/277 (45%), Gaps = 2/277 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + I I+H + A+ ++ LLS+FP ++ NL +G
Sbjct: 1 MDKESGKGKTFIALLIQHITMAQISSSAAVLAYYTLLSIFPAVMVVGNLLPMIGID--AK 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T++ + A PE + I I L + G+ T AL A + +S G+ A + S+N AY
Sbjct: 59 TILAYLSTAIPESVYDFIQPLIYDFLRRGSGGVLTTGALIALWSTSQGIAAFQRSVNHAY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ E ++ + R++SF ++++ V + I+ ++ L ++ F + + I +
Sbjct: 119 GIAENQNPVMNRIVSFVWMIVLLVIIFIIIILYGFGEQVLKSIQPIFNFRRDYIAIFSSL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R T LFI L ++ F+P AK ++ L G + W+ + LF+ Y + F
Sbjct: 179 RWPVTFGVLFIALTLLYYFVPNAKVRLRYALAGSFLASLLWMGLSRLFSFYTLLFGHGVI 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +V+L G +LGA LNA++ +
Sbjct: 239 SYKTIGAFIAMMVWLDFSGYIIMLGAALNAALQECHE 275
>gi|323340240|ref|ZP_08080504.1| ribonuclease BN [Lactobacillus ruminis ATCC 25644]
gi|323092431|gb|EFZ35039.1| ribonuclease BN [Lactobacillus ruminis ATCC 25644]
Length = 309
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 3/267 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V A F + + A IS ALL++ P ++F NL L TV+ +
Sbjct: 15 VRTFFLSAASRFNQANVSNEAIVISYYALLAIIPLMIFIGNLLPLLHLK--ASTVLAYIE 72
Query: 68 GAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A P I + + I+Q L + G +IS L + + +S G A++ SLN AY V +
Sbjct: 73 MAIPRSIYQTLKPFIIQYLENGSSGGAASISGLISIWAASRGFNAMKRSLNVAYGVENSQ 132
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RL +F + V V++ ++ L Y+ F +++ + M
Sbjct: 133 GMLARRLFAFLFTAFLGVAFVLLFIIYSFGQAVLEYLAPLFNLPMDMIDTFNQVKWPTIM 192
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ +F ++ ++ F+P AK + I PG +F W+V F+ Y+ F+ Y +
Sbjct: 193 VGIFWIMVLLYAFIPNAKLHLRFIWPGALFATCGWMVLTQGFSVYVKYFARTVLSYGTIG 252
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+++ L +L ++G +NA++
Sbjct: 253 TVIVVLFWLNFTCWVIMVGGIINATLE 279
>gi|302866698|ref|YP_003835335.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|302569557|gb|ADL45759.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
Length = 340
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 102/272 (37%), Gaps = 6/272 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVF 67
++ + + FV ++ A+ ++ +L++FP + L G + + V TVID+
Sbjct: 30 RGVLVRSGKGFVTDNCADWAAALTYYGVLALFPSTIVVVALVGLVSDGPRTVDTVIDLAR 89
Query: 68 GAWPEVIA--KPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + V+ L + L A + +S + A + N Y V
Sbjct: 90 EIGAGSVVGNDAFVGVVRNVVEQQGSAKVLLSFGLLGALWSASGFIGAFTRASNAIYGVR 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R +Y R + G + V L +++ + V A +
Sbjct: 150 EGRPFYRLRPLQIGMAAVTIVLLAVVATGLIVSGPVTDAVGDLLHAGAVARTTWSVAKWP 209
Query: 184 ATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L + P + + + PG +WV+ + F Y+ F +Y Y
Sbjct: 210 LLAVVAMTLLSLLFWIAPNVRQPRFRWLTPGGALALAAWVLASFGFGLYVANFGSYDVTY 269
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
L +++ LV+LY+ +LG ++NA +
Sbjct: 270 GSLGAVIAFLVWLYLSNCALMLGVQVNAELQR 301
>gi|227543996|ref|ZP_03974045.1| ribonuclease BN [Lactobacillus reuteri CF48-3A]
gi|300909547|ref|ZP_07127008.1| YihY family protein [Lactobacillus reuteri SD2112]
gi|227186025|gb|EEI66096.1| ribonuclease BN [Lactobacillus reuteri CF48-3A]
gi|300893412|gb|EFK86771.1| YihY family protein [Lactobacillus reuteri SD2112]
Length = 298
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 126/267 (47%), Gaps = 2/267 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I I+H + A+ ++ LLS+FP ++ NL +G T++ + A
Sbjct: 11 FIALLIQHITMAQISSSAAVLAYYTLLSIFPAVMVVGNLLPMIGID--AKTILAYLSTAI 68
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + I I L + G+ T AL A + +S G+ A + S+N AY + E ++ +
Sbjct: 69 PESVYDFIQPLIYDFLRRGSGGVLTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPVM 128
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R++SF ++++ V + I+ ++ L ++ F + + + + R T LF
Sbjct: 129 NRIVSFVWMIVVLVIIFIIIILYGFGEQVLKSIQPIFNFRRDYISLFSSLRWPVTFGVLF 188
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I L ++ F+P AK ++ L G + W+ + LF+ Y + FS Y + + +
Sbjct: 189 IALTLLYYFVPNAKVRLRYALAGSFLASLLWMGLSRLFSFYTILFSHSVISYKTIGAFIA 248
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
+V+L G +LGA LNA++ +
Sbjct: 249 MMVWLDFSGYIIMLGAALNAALQECHE 275
>gi|188588648|ref|YP_001922492.1| YihY family protein [Clostridium botulinum E3 str. Alaska E43]
gi|188498929|gb|ACD52065.1| YihY family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 282
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 67/263 (25%), Positives = 128/263 (48%), Gaps = 2/263 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I +D +A+AS ++ LLS FPFI+F L GF +++ + PE +
Sbjct: 19 IVKVKNDDIFALASQLAYYLLLSFFPFIIFLITLIGFSNMDSI--QILNGIRAIVPEAVF 76
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I++V GL IS L A + SS+G A+ +N+AY E RS+ +IS
Sbjct: 77 DLTASIIVEVFDKQYTGLLGISILLALWTSSSGFRAVIKGVNKAYNFKEHRSFIKRLIIS 136
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
V+ ++T+++ + V + Y+ K P ++++ R ++ +
Sbjct: 137 MISVIALALTIILALSMLVFGNVIGNYIVKVIPFTNLVIILWNICRYAFVVIIMIFIFAS 196
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ F P+ + + ++PG IF+ + W+V + F+ YI F +S Y L ++ + +L
Sbjct: 197 IYRFTPSKRLRWREVIPGSIFSTLGWIVTSYGFSFYIDNFRNFSRFYGSLGAVFILMTWL 256
Query: 256 YMLGVFFILGAELNASMIIYYWR 278
+++ + FILG E+N + + +
Sbjct: 257 FLISILFILGVEINCVLEQFKKQ 279
>gi|331010287|gb|EGH90343.1| ribonuclease BN [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 258
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + I Q L GL +I + A + +S GV + ++N AY VVE R
Sbjct: 8 LLPPQALEQVNPVIDQ-LQQSKGGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPI 66
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
+ +S Y + + L+ + V P + ++ + + ++ +W R A ++
Sbjct: 67 WKRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQI-GMEDFIVTLWTILRWPAIII 125
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +
Sbjct: 126 LLMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGA 185
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
I+ L++ Y+ +LGAE+NA +
Sbjct: 186 IIVLLLYFYISAAVLLLGAEMNAVIE 211
>gi|15893462|ref|NP_346811.1| T-RNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|15022998|gb|AAK78151.1|AE007530_2 T-RNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|325507577|gb|ADZ19213.1| T-RNA-processing ribonuclease BN [Clostridium acetobutylicum EA
2018]
Length = 273
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 127/265 (47%), Gaps = 2/265 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ D I F E+D A+ S ++ +LS FPFI+F L G+ + ++ V+
Sbjct: 1 MKRLLLDLISRFNEDDVPALGSQLAYYLVLSFFPFIIFIMTLIGYTSLNN--KEILMVLS 58
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + +V++ L ++S + + +S G A+ LN+AY V E R+
Sbjct: 59 RIMPESAFNLIHAAVAEVISTKHSQLMSLSLVLTIWSASAGFTAVIKGLNKAYGVQEARN 118
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ R +S + + ++ M F+ + + L Y+ ++ + R +
Sbjct: 119 FIKVRFVSILCTIGVAFIILTMMFLLILGRIILNYLAYKLGFSHKVIAVWEAVRYLIFVS 178
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ + P K + +LPG +F+ ++ ++ + F +Y+ F+ YS +Y + +
Sbjct: 179 TAIFIFTALYRYAPCKKLMWIEVLPGSLFSTLNLILASFGFAYYVNNFANYSVIYGSIGA 238
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L +L+++ V ILG E+NA +
Sbjct: 239 IIILLTWLFLVAVIVILGGEINAVL 263
>gi|326330668|ref|ZP_08196972.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
gi|325951509|gb|EGD43545.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
Length = 328
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 119/266 (44%), Gaps = 8/266 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ A + +A+ ++ + L+VFP ++ L G + V +D +
Sbjct: 28 QVVKRAWREAKSDQLPLLAAGVAFYSFLAVFPAMIAAVMLYGLVRDPGDVQREVDELSQT 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYRVVEMR 126
P A +T ++ + + + L ++ A + +S GV ++ ++N AY E R
Sbjct: 88 LPSDAASVLTTQLEAITSTSSGSLGLGLLVSLVLALWSASGGVGSIMSAVNIAYDEEETR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +L+S G + A V +++ + P L + G + + R +
Sbjct: 148 GFVKRKLLSLGLTVAAIVFVIVTISLVAVAPALLDNLVD----AGPVRWGLEAARWVGLV 203
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+A+ I L ++ P +++ + G + + W+V +V F+ Y+ F +Y+ Y L
Sbjct: 204 VAMSIALAVLYKVAPDRDDAELRWVSVGAVVATVLWLVASVGFSLYVDNFGSYNKTYGAL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ L++L++ +LGAE+NA
Sbjct: 264 AGVVVLLLWLWLTMYVVLLGAEINAE 289
>gi|88812085|ref|ZP_01127337.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
gi|88790589|gb|EAR21704.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
Length = 331
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 10/270 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI + + +A+ ++ ALLS+FP +V +L G + V G
Sbjct: 32 RDIALRLKDDITNHNISIIAAGVAFYALLSIFPALVAIVSLYGLVANPADVQQQFTHYGG 91
Query: 69 AWPEVIAKPITDEILQVLAVP----AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
PE I+ ++ ++ A + G+ + L A + ++ G +A ++LN Y E
Sbjct: 92 ILPEEAQLLISQQLQRITASATSAMSAGVIS-GVLFAVWSATRGTKAFMLALNIVYNEKE 150
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + I+ + +V+ + V +P+ L+ + G L ++
Sbjct: 151 KRGFLQFNKIALMITFGMIMLVVLALGLIVTLPILLSILN----LPGALSTVLSFFPWLL 206
Query: 185 TMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L + + P+ + G I + WV+ ++LF+ Y+ F Y+ Y
Sbjct: 207 LSGCFVFWLAMLFRYGPSRSEPQWNWVSVGSIAATVLWVITSMLFSFYVGNFGKYANTYG 266
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ +I+ L++ Y+ + GAELNA M
Sbjct: 267 SVGAIIILLLWFYLTAFVILFGAELNAQME 296
>gi|299132223|ref|ZP_07025418.1| ribonuclease BN [Afipia sp. 1NLS2]
gi|298592360|gb|EFI52560.1| ribonuclease BN [Afipia sp. 1NLS2]
Length = 294
Score = 185 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 110/280 (39%), Positives = 159/280 (56%), Gaps = 5/280 (1%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ F I DA F+ +DGWA+ASHI+LSAL++ FPF++ A+LAGFLG+
Sbjct: 3 FIRRAFQIGIDAFNAFLADDGWAIASHIALSALMAFFPFLIVLASLAGFLGSKDLADQAA 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ WP A + +I VL T+ + + YFSSNGVE+LR+ LNRAY V
Sbjct: 63 GLMLQVWPSQAADALVTQIHDVLTQTRGDALTLGLVLSVYFSSNGVESLRVGLNRAYGVT 122
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RI 182
E R WY RL S GY L+A++ ++++ + V PL LA R + P + + N R
Sbjct: 123 ETRPWYWLRLESIGYTLIAALISLVLALLLVLGPLLLATARYYLPLIIEPKAHLLNFSRY 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTM 241
+++L L +H +LPA + I+PG+ FT I+ +V A F Y+ F+ Y T
Sbjct: 183 AIALVSLVSALFVLHAWLPAGHRTLRQIMPGIAFTVIASLVSAAGFGQYLARFANNYVTT 242
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
YAGLAS++ LVFLY + FI G LNA++I RK+P
Sbjct: 243 YAGLASVVIALVFLYFIAAIFIFGGALNAAII---RRKQP 279
>gi|114763244|ref|ZP_01442668.1| Ribonuclease BN [Pelagibaca bermudensis HTCC2601]
gi|114544042|gb|EAU47052.1| Ribonuclease BN [Roseovarius sp. HTCC2601]
Length = 313
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 109/264 (41%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ E+ +A+ ++ LL++FP I +AG V I + P+
Sbjct: 25 RVKDGIGEDRLSLIAAGVAFFGLLAIFPAITALMAVAGLFLTPADVTDQIQQISAMLPDR 84
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVEMRSWYI 130
A+ + D+ V GL + L Y +S GV L LN AY E R +
Sbjct: 85 AAEIVIDQAKSVAGSDQGGLGLAALLGLGLALYSASAGVGNLVAGLNVAYGERESRGFVK 144
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L + L V LV+ + +P LA + P G L++ R +
Sbjct: 145 LKLTTMALTFLLIVGLVLAFAGVLILPGVLAVI----PLGGTAELLVSGLRWVLLLGFTV 200
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ F P + ++ + PG + W+V +V F+ Y F +Y + LA ++
Sbjct: 201 LAVALIYHFGPDRRPARWRWVTPGAAIACLLWIVTSVGFSIYAENFGSYQETFGSLAGVV 260
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L +L++ +LG ++NA +
Sbjct: 261 ILLFWLWISAFVVLLGGKINAELE 284
>gi|49484124|ref|YP_041348.1| hypothetical protein SAR1973 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295428464|ref|ZP_06821091.1| hypothetical protein SIAG_02233 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|49242253|emb|CAG40960.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295127446|gb|EFG57085.1| hypothetical protein SIAG_02233 [Staphylococcus aureus subsp.
aureus EMRSA16]
Length = 405
Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYYVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|241896536|ref|ZP_04783832.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
gi|241870258|gb|EER74009.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
Length = 295
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 57/272 (20%), Positives = 122/272 (44%), Gaps = 2/272 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + +I +H+ + A ++ LLS+FP ++ A+L +L T
Sbjct: 6 RKCASQIKHVIQTISKHYQMANVSDSAVVLAYYTLLSLFPALLVIASLLPYLNIQ--TET 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++ + PE I + I L + G+ +I + A + SS V A + ++N AY
Sbjct: 64 VLESIEPMVPESIFSMLKPSIHSFLNTRSGGVLSIGVIVALWSSSRAVAAFQRTVNGAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ + R+++F +++ L ++ F + L + + ++ I +
Sbjct: 124 VAKNQNALVNRIVAFFWMVALITFLFVLMLFFSLGQIILEQLAPYLHVPHEIIGYINAAK 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T L + + L+ + F+P+AK K + PG + + W++ + F+ Y+ F
Sbjct: 184 WPVTFLVVLLVLMILLYFVPSAKLKWRFVWPGALTATVGWLLLSQAFSLYVKYFMHNMDS 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + + + + L + + GA LNA++
Sbjct: 244 YRTIGTFIVLMFCLDFTELILMFGAVLNAAIQ 275
>gi|331268878|ref|YP_004395370.1| ribonuclease BN [Clostridium botulinum BKT015925]
gi|329125428|gb|AEB75373.1| ribonuclease BN, putative [Clostridium botulinum BKT015925]
Length = 271
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 130/265 (49%), Gaps = 2/265 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ + + +++ +A+AS ++ S LLS FPF++F + + V+ +
Sbjct: 8 KTIFQLLYNLKKDEIFALASQLAYSLLLSFFPFLIFLFTITSYSTIQS--DRVLFTLKNI 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + I +VL L + S + + +SNG +A+ +LN+AY E RS+
Sbjct: 66 IPESAYTLVYSIINEVLESKNVNLLSFSFIITIWIASNGFKAVIRALNKAYGEKEERSFI 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+L++ ++ + ++ F+ V + + KFF NL + R + ++ +
Sbjct: 126 KLQLMAIITTIILTFLIIFSLFLLVLGNIIGYKIMKFFSLPDNLFFVWNVFRYFLMLIFM 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++ P K +LPG IF I W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 186 ILIFAVIYKLTPCRKLTFGEVLPGSIFATIGWIIVSLGFSFYVDNFANYSRLYGSIGAVI 245
Query: 250 TCLVFLYMLGVFFILGAELNASMII 274
+V+L++ + ++G E+NA ++
Sbjct: 246 ILMVWLFLTSIIILIGGEINALLLK 270
>gi|316935505|ref|YP_004110487.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
gi|315603219|gb|ADU45754.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
Length = 319
Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 118/273 (43%), Gaps = 10/273 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ D + +A+ + LL +FP I + + + +
Sbjct: 43 VFADTYARIGGDRLLLVAAGVVFYWLLGLFPAITALVSSYALFADPVTISGHLAQLSAVV 102
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I +++ +VLA L F +S A + ++ GV+A+ +LN Y V E R
Sbjct: 103 PAGTYSVIEEQVGRVLANGQTRLGFAFLVSLSLALWSANGGVKAIIDALNAVYDVEEERG 162
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATM 186
++ S L A ++ + +A P+ LA + LG+L+ ++ + GR
Sbjct: 163 FFKLNAFSLLLTLGALGAVLAAIGLVIAAPIVLAQI-----GLGSLVAVVIDYGRWPVLA 217
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L F GL ++ S +LPG + +SW+ G+ ++Y+ F+ Y+ Y L
Sbjct: 218 LLTFAGLGLLYRTAANRPSPPWRWVLPGSVAATLSWLAGSAALSYYLANFADYNATYGSL 277
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + +++++M + ++G ELNA++ R
Sbjct: 278 GAAIGLMIWMWMTAIVVLVGGELNAAIEARAGR 310
>gi|56696732|ref|YP_167093.1| ribonuclease BN, putative [Ruegeria pomeroyi DSS-3]
gi|56678469|gb|AAV95135.1| ribonuclease BN, putative [Ruegeria pomeroyi DSS-3]
Length = 284
Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats.
Identities = 87/265 (32%), Positives = 140/265 (52%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ A+ F + G+ M+SH+++S ++++FPFI+F LAG L +I ++FG
Sbjct: 13 LRAAWLALMRFQAKSGFVMSSHVAMSMMMALFPFILFTVALAGSLSQDLVTDDLIQLIFG 72
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
WPE +A PI E+ VLA + T+ + A YF+SNGV+A+R +++RAY E R +
Sbjct: 73 TWPEQVATPIVAELKAVLAGANSRVMTVGGVLAVYFASNGVDAVREAMSRAYHDAETRPF 132
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ TRL+ V+ ++ ++ V +P+ V P L + +
Sbjct: 133 WKTRLLCIAIVVGGGAIVLAVAAFEVVMPIYTRLVTDALPGAAPDWLSVERLSWIFVVAM 192
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
++ H LPA + + ILPGV+ T + W F+ YI F++YST YAGLA
Sbjct: 193 PAGAVLACHALLPAGRHPLRRILPGVVLTLVLWAGCGWGFSLYIANFASYSTTYAGLAGA 252
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
M L+FLY+ ILGAE N +++
Sbjct: 253 MAALIFLYLNAAILILGAEFNGALM 277
>gi|85709734|ref|ZP_01040799.1| hypothetical protein NAP1_12653 [Erythrobacter sp. NAP1]
gi|85688444|gb|EAQ28448.1| hypothetical protein NAP1_12653 [Erythrobacter sp. NAP1]
Length = 365
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 2/267 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+++ + + ++ G+ A +++ ++L++FPF + GA L G +++ V
Sbjct: 64 IYETVRRTLVGTWQD-GFIHAGNLAYLSMLAIFPFFILGAALFELFGGRDLAVSMVQTVV 122
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P AK I V+ L A A + S+ +E++R L RAY S
Sbjct: 123 AGLPPSAAKVIAPVAEDVVYARTGWLLWFGAAVALWTVSSLIESIRDILRRAYGTRARHS 182
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYATM 186
+ RL+S G +L A V L+ F V I A + + FP L L + R + A
Sbjct: 183 FVRYRLLSAGIILGAVVVLMASLFAQVMIGTAQVVIMERFPQLLEALGTLRLSRVVPAAG 242
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L + L+F L ++K+ PG +FT + W + + +F TY Y +A
Sbjct: 243 LMLSLYLLFYTLTPTEYRAKVYPKWPGALFTAVWWFGVTIALPPIMRSFFTYDLTYGSMA 302
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
I+ L F +++G+ ++GAELNA++
Sbjct: 303 GIIIALFFFWLVGLGLVIGAELNAALA 329
>gi|89097332|ref|ZP_01170222.1| transporter [Bacillus sp. NRRL B-14911]
gi|89088155|gb|EAR67266.1| transporter [Bacillus sp. NRRL B-14911]
Length = 277
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 3/256 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ E+D + +A+ ++ LLS+FP ++F L +L Q ++ + P
Sbjct: 15 VWKKIHEDDIFGLAAQLAYFFLLSLFPLLIFLVTLITYLPVSQV--DILGFIRDYAPGDT 72
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
I + Q+ + L ++ + + +SNG+ A+ + N AY V E R + R +
Sbjct: 73 MALIESNLNQIAD-RSGTLLSVGIIGTIWSASNGIHAIVKAFNLAYEVKESRPLIVARGM 131
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ V+ + V ++ F L R +++ LFI +
Sbjct: 132 AILLTFAMIFVFVVALLLPVFGKQIGVFLFSAFDLSSEFLSAWNALRWLVSIVILFIVFL 191
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ P K K +S LPG IF W++ ++ F++Y+ F+ Y+ Y + +I+ +V+
Sbjct: 192 VLYWIAPNVKMKCISALPGAIFATAGWILASLAFSYYVGNFANYTAAYGSIGAIIVLMVW 251
Query: 255 LYMLGVFFILGAELNA 270
Y+ GV ILG E+NA
Sbjct: 252 FYLTGVIIILGGEVNA 267
>gi|269795024|ref|YP_003314479.1| hypothetical protein Sked_17180 [Sanguibacter keddieii DSM 10542]
gi|269097209|gb|ACZ21645.1| predicted membrane protein [Sanguibacter keddieii DSM 10542]
Length = 381
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 115/269 (42%), Gaps = 6/269 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
++ F + +A+ ++ A+L+ P ++ ++ G +G V V+ +V
Sbjct: 35 VLRSTARQFTRDQCLDLAAALTYYAVLASAPALLALVSILGLVGDGGALVEDVLGIVSSV 94
Query: 70 WPEVIAKPITDEILQVLAVPAK-GL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + QV + + GL I A + +S V A +LNR Y + E R
Sbjct: 95 LPAETMATVEPLVDQVASQSSGAGLALVIGLAGALWSASGYVGAFGRALNRVYEIEEGRP 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ R + L+ +V ++ V V LG++ L +W+ + +L
Sbjct: 155 VWKLRPANLLITLVVAVGAALVVVALVLSGGVAQAVGDTI-GLGSVALTVWSVAKWPVVL 213
Query: 188 ALFIGL-IFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ IG+ ++ P + + + G + + W V + F Y+ T +Y + Y L
Sbjct: 214 LVVIGMVALLYHSTPNVRQPRFRWLSVGALVAILVWAVASAGFGVYVATLGSYGSTYGTL 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
+++ L++L++ + + GAEL++ +
Sbjct: 274 GTVIVFLLWLWITNLALLFGAELDSELER 302
>gi|148273269|ref|YP_001222830.1| hypothetical protein CMM_2087 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831199|emb|CAN02152.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 395
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVF 67
+ A+ F++ G MA+ ++ + LS+ P V +L G +G + V V+ V+
Sbjct: 36 WYACRRAVYGFMKHRGIDMAASLTFYSTLSLVPAAVAVLSLIGVVGDTRAGVEGVLGVLT 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ I D + Q+ P G+ FT+S L A + S+ V A ++NR E R
Sbjct: 96 AVLGDSAVDVIRDPVEQLADGPRSGIAFTVSFLGALWTSAAYVTAFGRAMNRVQETEEGR 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
R + G + V V+M + + + + LG+ L++W + +
Sbjct: 156 PLVKYRALMLGVTVALLVVSVVMVGMLLLTDDGARALGQQL-GLGDTTLVVWAIVKWPLL 214
Query: 187 LALFIGLI-FVHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
AL G+I ++ P + + + +L G + ++W +G F Y+ T +TY + Y
Sbjct: 215 AALLTGIIGVLYAATPNLRRRRVDLLTWGSLVAIVAWGLGTAGFVWYVTTIATYESTYGV 274
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L +++ L++LY+ + +LG EL+ +I
Sbjct: 275 LGAVIVLLLWLYIGNLSLVLGGELDVEIIRARQ 307
>gi|320108330|ref|YP_004183920.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
gi|319926851|gb|ADV83926.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
Length = 324
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 110/267 (41%), Gaps = 3/267 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVIDVVFG 68
+ +E++ + AS ++ ++FP ++ +++ G A ++D +
Sbjct: 36 VAKRTWTAVIEDNLFGRASQLAYYFFFALFPTLIAMSSVMGLAAKSATHIYVQLLDKIAS 95
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + D Q + T+ L A + +S GV A++ +LN Y+V E RS+
Sbjct: 96 LVPPAAFGIVMDTFHQTTQASSTRKVTLGLLTALWSASVGVSAIQDTLNAVYKVKETRSY 155
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R + + S+ L + + VR F + + L
Sbjct: 156 WRARGEAMVLTIAVSLVLTAALGALLGGSIGAELVRYKFSGAIAVSIATRTVAWIVATLL 215
Query: 189 LFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ F P K K PG + WV+G++ Y+ F +YS Y L +
Sbjct: 216 MVLIFALLYFFSPDVQKRKWHWFSPGSAIGLLGWVLGSLGLRLYLHWFDSYSVTYGSLGA 275
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
++ L + Y+ G+ +LGAE+N+ +
Sbjct: 276 VIILLTWFYVAGLMLLLGAEVNSEIEA 302
>gi|225569108|ref|ZP_03778133.1| hypothetical protein CLOHYLEM_05188 [Clostridium hylemonae DSM
15053]
gi|225161907|gb|EEG74526.1| hypothetical protein CLOHYLEM_05188 [Clostridium hylemonae DSM
15053]
Length = 283
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + ++ + + ++ A A+ + +L + P I+ + + + V
Sbjct: 2 KSYRKLYKKGKEISQEVTDDHVGAYAAQSAFFFMLCLIPIILLLITMVQYTPVTK--ADV 59
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ V +P + IT + QV + G+ ++ + A + + GV A+ LN Y
Sbjct: 60 MTAVIRVFPSSVDSLITSIVNQVY-NQSSGIIPVTVIVALWSAGKGVLAMTGGLNCVYNC 118
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R++ + R+ + Y ++ + ++ + + V ++ + P L L + R+
Sbjct: 119 RETRNYLVLRIRATLYTVMFILVIIFLLVLSVFGNTLNIFIAEHIPILSGLADWLIRTRV 178
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
Y + L + + ++ FLP K + +PG +F I W++ + +F+ Y+ F +S MY
Sbjct: 179 YIMPVVLVVFSLLIYKFLPNRKDSLKKQIPGAVFAAIGWMIVSWIFSVYVDIFKGFSDMY 238
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELN 269
L +I+ ++++Y +LG E+N
Sbjct: 239 GSLTTIVLIMLWMYFCMYSILLGGEIN 265
>gi|77463212|ref|YP_352716.1| ribonuclease BN family protein [Rhodobacter sphaeroides 2.4.1]
gi|77387630|gb|ABA78815.1| Ribonuclease BN family protein [Rhodobacter sphaeroides 2.4.1]
Length = 373
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 121/274 (44%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI E+ +A+ ++ LL++FP + +L G + + + G
Sbjct: 79 DIALRVWRSIDEDRVMLVAAGVTFYLLLALFPALAAFVSLYGLFADPAVIAEQAESLRGV 138
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +T+++ + + + L F +S L A + +++G++AL ++N A+ E R
Sbjct: 139 IPAEGLDLLTEQLRTLASGESSSLTFSFVLSFLIAFWSANSGMKALIEAMNIAHEEREKR 198
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+SF L A V ++ + + V F ++W R +
Sbjct: 199 SFVKLTLLSFALTLGAMV----LAVTMIVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLL 254
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ + + G + W++ ++ FT Y+ F+ YS Y L
Sbjct: 255 LLVATAMAGLYRWAPSRNAPEWRWVTWGSGIATLVWLIASIAFTIYLENFANYSATYGSL 314
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ L+++++ + I+GAE+N+ M R
Sbjct: 315 GALVGLLLWVWIAVMILIVGAEVNSEMEHQTARD 348
>gi|194466846|ref|ZP_03072833.1| ribonuclease BN [Lactobacillus reuteri 100-23]
gi|194453882|gb|EDX42779.1| ribonuclease BN [Lactobacillus reuteri 100-23]
Length = 296
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 2/267 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I I+H + A+ ++ LLS+FP ++ NL +G T++ + A
Sbjct: 11 FIALLIQHITMAQISSSAAVLAYYTLLSIFPAVMVVGNLLPMIGID--AKTILAYLSTAI 68
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + I I L + G+ T AL A + +S G+ A + S+N AY + E ++ +
Sbjct: 69 PESVYSFIQPLIYDFLRRGSGGILTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPVM 128
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R++SF ++++ V + I+ ++ L ++ F + + I + R T LF
Sbjct: 129 NRIVSFVWMIVVLVIIFIIIILYGFGEQVLKSIQPIFNFRRDYIAIFSSLRWPVTFGVLF 188
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I L ++ F+P AK ++ L G + W+ + LF+ Y + FS Y + + +
Sbjct: 189 IALTLLYYFVPNAKVRLRYALAGSFLASLLWMGLSRLFSFYTLLFSHGVISYKTIGAFIA 248
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
+V+L G +LGA LNA++ +
Sbjct: 249 MMVWLDFSGYIIMLGAALNAALQECHE 275
>gi|291302773|ref|YP_003514051.1| ribonuclease BN [Stackebrandtia nassauensis DSM 44728]
gi|290571993|gb|ADD44958.1| ribonuclease BN [Stackebrandtia nassauensis DSM 44728]
Length = 301
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 110/266 (41%), Gaps = 5/266 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ I+ F ++ A+ ++ +LS+FP ++ A+L G G Q T + V P
Sbjct: 11 LKRTIKEFNADNLTDAAAALTYYGVLSIFPGLLVLASLMGLFG--QSATTSMKDVTAVAP 68
Query: 72 EVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +TD V A PA + + LAA + +S + A + N Y V E R +
Sbjct: 69 GPVRDILTDATTGVAAQPATAGVMAIVGLLAALWAASGYIGAFMRASNVVYDVPEGRPIW 128
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
T + + V LV + + V V + + + + ++ +
Sbjct: 129 KTLPLRLAVTICVGVLLVASALIVVLTGQLAGTVGELLGVGATAVTVWDIAKWPVLVVLV 188
Query: 190 FIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++ P AK + PG + W+V + F Y+ F++Y+ Y L I
Sbjct: 189 ALIFSILYWASPNAKVGGPLRQAPGGLVAVGLWLVASAGFAFYVANFASYNKTYGTLGGI 248
Query: 249 MTCLVFLYMLGVFFILGAELNASMII 274
+ ++L++ + + GAELNA +
Sbjct: 249 IVFFIWLWVSNLAILFGAELNAELER 274
>gi|251779224|ref|ZP_04822144.1| YihY family protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083539|gb|EES49429.1| YihY family protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 282
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I +D +A+AS ++ LLS FPFI+F L GF +++ + PE +
Sbjct: 19 IVKVKNDDIFALASQLAYYLLLSFFPFIIFLITLIGFSNMDSI--QILNGIRAIVPEAVF 76
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I++V GL IS L A + SS+G A+ +N+AY E RS+ +IS
Sbjct: 77 DLTSSIIIEVFDKQYTGLLGISILLALWTSSSGFRAVIKGVNKAYSFKEHRSFIKRLIIS 136
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
V+ ++T+++ + V + Y+ K P ++++ R ++ +
Sbjct: 137 MISVIALALTIILALSMLVFGNVIGNYIVKVIPFTNLVIILWNICRYAFVVIIMIFIFAS 196
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ F P+ + + ++PG IF+ + W+V + F+ YI F +S Y L ++ + +L
Sbjct: 197 IYRFTPSKRLRWREVIPGSIFSTLGWIVTSYGFSFYIDNFRNFSRFYGSLGAVFILMTWL 256
Query: 256 YMLGVFFILGAELNASMIIYYWR 278
+++ + FILG E+N + + +
Sbjct: 257 FLISILFILGVEINCVLEQFKKQ 279
>gi|322436851|ref|YP_004219063.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
gi|321164578|gb|ADW70283.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
Length = 386
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 109/269 (40%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGA 69
I F E++ + A+ + L ++FP ++ + + G + + + +++ +
Sbjct: 89 IAKRTFHSFNEDNLLSRAAELGYYFLFALFPTLITASAILGLVVRNSTLYLKLLNYLALV 148
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P K + + Q + A + +S G A++ +LN Y+V E R ++
Sbjct: 149 VPADAFKLVLETFTQTTTHSSGSKLIFGLAAGLWSASVGFSAIQDTLNIVYKVKETRPYW 208
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIWNGRIYATM 186
+ + +L S+ ++++ ++ L +I+
Sbjct: 209 KVKGAAILVTVLLSIIVILILGSMFTGSFVAHWLYTHIAQHQLALAVNVIVRFIAWSCAA 268
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + ++ F P K+K PG WV+ +V+ Y+ F++YS Y L
Sbjct: 269 LLCVLLFAVIYYFAPDVKNKHWRWFTPGAAVGIGGWVLASVILRVYLHYFNSYSVTYGSL 328
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
+++ L + YM G+ + GAE+N+ +
Sbjct: 329 GAVIILLTWFYMTGLMLLTGAEMNSEIEA 357
>gi|229545287|ref|ZP_04434012.1| ribonuclease BN [Enterococcus faecalis TX1322]
gi|293382826|ref|ZP_06628747.1| YihY family protein [Enterococcus faecalis R712]
gi|293387965|ref|ZP_06632498.1| YihY family protein [Enterococcus faecalis S613]
gi|312901455|ref|ZP_07760730.1| YihY family protein [Enterococcus faecalis TX0470]
gi|312905909|ref|ZP_07764923.1| YihY family protein [Enterococcus faecalis DAPTO 512]
gi|312908943|ref|ZP_07767806.1| YihY family protein [Enterococcus faecalis DAPTO 516]
gi|229309637|gb|EEN75624.1| ribonuclease BN [Enterococcus faecalis TX1322]
gi|291079817|gb|EFE17181.1| YihY family protein [Enterococcus faecalis R712]
gi|291082621|gb|EFE19584.1| YihY family protein [Enterococcus faecalis S613]
gi|310628076|gb|EFQ11359.1| YihY family protein [Enterococcus faecalis DAPTO 512]
gi|311290727|gb|EFQ69283.1| YihY family protein [Enterococcus faecalis DAPTO 516]
gi|311291444|gb|EFQ70000.1| YihY family protein [Enterococcus faecalis TX0470]
gi|315161842|gb|EFU05859.1| YihY family protein [Enterococcus faecalis TX0645]
gi|315173054|gb|EFU17071.1| YihY family protein [Enterococcus faecalis TX1346]
Length = 303
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 65/278 (23%), Positives = 135/278 (48%), Gaps = 6/278 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I H V + + ++ LLS+FP ++ N+ +L +V+ +
Sbjct: 13 LMRFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + ++
Sbjct: 71 EAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R++SF +LL V +V + + + ++ F +++ + T +
Sbjct: 131 FILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S
Sbjct: 191 VLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY----YWRKKP 281
+ +++L ILGA +NA + Y +K+P
Sbjct: 251 FIILMLWLNFAATIIILGAIVNAVVDEYLSGDKEKKQP 288
>gi|256961436|ref|ZP_05565607.1| ribonuclease BN [Enterococcus faecalis Merz96]
gi|257084723|ref|ZP_05579084.1| ribonuclease BN [Enterococcus faecalis Fly1]
gi|256951932|gb|EEU68564.1| ribonuclease BN [Enterococcus faecalis Merz96]
gi|256992753|gb|EEU80055.1| ribonuclease BN [Enterococcus faecalis Fly1]
Length = 304
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I H V + + ++ LLS+FP ++ N+ +L +V+ +
Sbjct: 14 LMRFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIA 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + ++
Sbjct: 72 EAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R++SF +LL V +V + + + ++ F +++ + T +
Sbjct: 132 FILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTV 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S
Sbjct: 192 VLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGS 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L ILGA +NA + Y
Sbjct: 252 FIILMLWLNFAATIIILGAIVNAVVDEY 279
>gi|86159452|ref|YP_466237.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775963|gb|ABC82800.1| ribonuclease BN, putative [Anaeromyxobacter dehalogenans 2CP-C]
Length = 338
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 112/261 (42%), Gaps = 6/261 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ ++ +A+ ++ +L++FPF++F LA + ++ + P
Sbjct: 15 KGLYQELGHDNVTDLAATVTYYGVLALFPFLLFLVALASVVITPAQAQALVHQLAQVAPG 74
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ K + D I Q+ A L AL A + +S AL SLN AY V E R ++ R
Sbjct: 75 EVTKIVGDRIQQLGAQQNVTLLGFGALGALWAASGATLALMRSLNTAYDVKESRPFWKVR 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I+ ++A V + + VA + G+ I R+ L +
Sbjct: 135 AIALLMTVVAGVLALAGAVAAVATEPIANAIG------GSAGAAILWLRLPFAALVMMSL 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ LP + + I PG +F + WV+ + F Y+ F Y Y +A ++ L
Sbjct: 189 WALLYYVLPDVEQQFKFITPGSVFGVVLWVLASWGFGKYVANFGHYDKTYGSIAGVIVLL 248
Query: 253 VFLYMLGVFFILGAELNASMI 273
++++ + ++GAE+NA +
Sbjct: 249 FWMWISSLVLLVGAEINALIE 269
>gi|303242465|ref|ZP_07328946.1| ribonuclease BN [Acetivibrio cellulolyticus CD2]
gi|302589989|gb|EFL59756.1| ribonuclease BN [Acetivibrio cellulolyticus CD2]
Length = 281
Score = 183 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 65/279 (23%), Positives = 129/279 (46%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + +++ D F ++D A+AS ++ +L++FPF++F NL
Sbjct: 5 KKRARLINVVKDLYFRFNDDDVPALASQLAYYFILAIFPFLIFLINLVSLTPITS--EQA 62
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ + P + I I QV + + S A + SSNG+ A+ SLN+AY
Sbjct: 63 LNDLSKIIPTAVYDIIRGVIGQVAQTNRETFLSFSMAATLWVSSNGMNAVVKSLNKAYDQ 122
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R+++ R +S + + T++ + + + V F + ++ R
Sbjct: 123 HETRAFWKVRGLSIIATIAFAFTILFSFILLILGEIIGRNVFIFLGFSNSFKMLWPYIRF 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L +FI ++ ++P + K + G +F+ W + ++LF+ Y+ FS YS+ Y
Sbjct: 183 IIPVLIMFIVFTLLYRYMPNRRMKYYEVFAGSLFSSFGWFITSILFSLYVNNFSNYSSTY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ I+ +++LY + + +LG ELNAS+ K
Sbjct: 243 GSIGGIILLIIWLYWISIIILLGGELNASLAYNRIEHKK 281
>gi|315033446|gb|EFT45378.1| YihY family protein [Enterococcus faecalis TX0017]
Length = 302
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I H V + + ++ LLS+FP ++ N+ +L +V+ +
Sbjct: 13 LMRFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + ++
Sbjct: 71 EAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R++SF +LL V +V + + + ++ F +++ + T +
Sbjct: 131 FILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S
Sbjct: 191 VLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L ILGA +NA + Y
Sbjct: 251 FIILMLWLNFAATIIILGAIVNAVVDEY 278
>gi|220918325|ref|YP_002493629.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956179|gb|ACL66563.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-1]
Length = 338
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 111/261 (42%), Gaps = 6/261 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
++ +A+ ++ +L++FPF++F LA + ++ + P
Sbjct: 15 KGLYHELDHDNVTDLAATVTYYGVLALFPFLLFLVALASVVITPAQAQQLVHQLAQVAPG 74
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ K + D I Q+ A L AL A + +S AL SLN AY V E R ++ R
Sbjct: 75 EVTKIVGDRIQQLGAQQNVTLLGFGALGALWAASGATLALMRSLNTAYDVGESRPFWKVR 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I+ ++A V ++ + VA + G I R+ L +
Sbjct: 135 AIALLMTVVAGVLALVGALAAVATEPLANAIG------GRAGAAILWLRLPVAALVMMFL 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ LP + + I PG +F + WV+ + F Y+ F Y Y +A ++ L
Sbjct: 189 WALLYYVLPDVEQRFKFITPGSVFGVVLWVLASWGFGKYVANFGHYDKTYGSIAGVIVLL 248
Query: 253 VFLYMLGVFFILGAELNASMI 273
++++ + ++GAE+NA +
Sbjct: 249 FWMWLSALVLLVGAEINALIE 269
>gi|197123527|ref|YP_002135478.1| ribonuclease BN [Anaeromyxobacter sp. K]
gi|196173376|gb|ACG74349.1| ribonuclease BN [Anaeromyxobacter sp. K]
Length = 338
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 111/261 (42%), Gaps = 6/261 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
++ +A+ ++ +L++FPF++F LA + ++ + P
Sbjct: 15 KGLYHELDHDNVTDLAATVTYYGVLALFPFLLFLVALASVVITPAQAQQLVHQLAQVAPG 74
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ K + D I Q+ A L AL A + +S AL SLN AY V E R ++ R
Sbjct: 75 EVTKIVGDRIQQLGAQQNVTLLGFGALGALWAASGATLALMRSLNTAYDVGESRPFWKVR 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I+ ++A V ++ + VA + G I R+ L +
Sbjct: 135 AIALLMTVVAGVLALVGALAAVATEPLANAIG------GRAGAAILWLRLPVAALVMMFL 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ LP + + I PG +F + WV+ + F Y+ F Y Y +A ++ L
Sbjct: 189 WALLYYVLPDVEQRFKFITPGSVFGVVLWVLASWGFGKYVANFGHYDKTYGSIAGVIVLL 248
Query: 253 VFLYMLGVFFILGAELNASMI 273
++++ + ++GAE+NA +
Sbjct: 249 FWMWLSALVLLVGAEINALIE 269
>gi|329767146|ref|ZP_08258674.1| hypothetical protein HMPREF0428_00371 [Gemella haemolysans M341]
gi|328837871|gb|EGF87496.1| hypothetical protein HMPREF0428_00371 [Gemella haemolysans M341]
Length = 300
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + + ++ +++++S +LS+FP ++ L + Q +++ +
Sbjct: 21 IKKFVKEMYYRLMYDEISLLSANLSYYFILSLFPMLIVALALTPYFKIDQ--QFLLERIQ 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + D I +VL + T+ + + +S+G+ + I+ N A+RV + R
Sbjct: 79 NFAPGDLGNYLFDMISEVLNNKNNTIITVGIVFTLWSASSGIYGIIIAFNNAFRVRDGRI 138
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W +T+LIS L V + ++ + V + F + +L
Sbjct: 139 WIVTKLISVVITALFLVGMFVVLALVVFGKQLTYLLFHKFNLDEGFYNLWSVLNYSFPIL 198
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
FI +F+++ P K K +SILPG IF +SW + + LF +YI FS+Y Y + +
Sbjct: 199 FTFIVFVFLYIMGPNLKLKAISILPGSIFATVSWTLISRLFGYYIDHFSSYIKTYGTIGA 258
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M +++LY+ G I+GAE+NA Y +
Sbjct: 259 FMAFIIWLYITGYILIIGAEINAIFHNYRVEHR 291
>gi|315193410|gb|EFU23807.1| hypothetical protein CGSSa00_04751 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 380
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAM---FPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L++LY+ I+GAE+NA +
Sbjct: 309 ILLLWLYITSFIIIVGAEINAII 331
>gi|29376707|ref|NP_815861.1| ribonuclease BN, putative [Enterococcus faecalis V583]
gi|227520254|ref|ZP_03950303.1| ribonuclease BN [Enterococcus faecalis TX0104]
gi|227555312|ref|ZP_03985359.1| ribonuclease BN [Enterococcus faecalis HH22]
gi|229549522|ref|ZP_04438247.1| ribonuclease BN [Enterococcus faecalis ATCC 29200]
gi|294779051|ref|ZP_06744464.1| YihY family protein [Enterococcus faecalis PC1.1]
gi|300861102|ref|ZP_07107189.1| YihY family protein [Enterococcus faecalis TUSoD Ef11]
gi|307270373|ref|ZP_07551678.1| YihY family protein [Enterococcus faecalis TX4248]
gi|307272381|ref|ZP_07553637.1| YihY family protein [Enterococcus faecalis TX0855]
gi|307277271|ref|ZP_07558375.1| YihY family protein [Enterococcus faecalis TX2134]
gi|307281885|ref|ZP_07562100.1| YihY family protein [Enterococcus faecalis TX0860]
gi|307292424|ref|ZP_07572280.1| YihY family protein [Enterococcus faecalis TX0411]
gi|312903787|ref|ZP_07762960.1| YihY family protein [Enterococcus faecalis TX0635]
gi|312953341|ref|ZP_07772183.1| YihY family protein [Enterococcus faecalis TX0102]
gi|29344171|gb|AAO81931.1| ribonuclease BN, putative [Enterococcus faecalis V583]
gi|227072333|gb|EEI10296.1| ribonuclease BN [Enterococcus faecalis TX0104]
gi|227175523|gb|EEI56495.1| ribonuclease BN [Enterococcus faecalis HH22]
gi|229305340|gb|EEN71336.1| ribonuclease BN [Enterococcus faecalis ATCC 29200]
gi|294453881|gb|EFG22270.1| YihY family protein [Enterococcus faecalis PC1.1]
gi|295113362|emb|CBL31999.1| Predicted membrane protein [Enterococcus sp. 7L76]
gi|300850141|gb|EFK77891.1| YihY family protein [Enterococcus faecalis TUSoD Ef11]
gi|306496553|gb|EFM66114.1| YihY family protein [Enterococcus faecalis TX0411]
gi|306503839|gb|EFM73061.1| YihY family protein [Enterococcus faecalis TX0860]
gi|306506201|gb|EFM75367.1| YihY family protein [Enterococcus faecalis TX2134]
gi|306510935|gb|EFM79949.1| YihY family protein [Enterococcus faecalis TX0855]
gi|306513281|gb|EFM81908.1| YihY family protein [Enterococcus faecalis TX4248]
gi|310628729|gb|EFQ12012.1| YihY family protein [Enterococcus faecalis TX0102]
gi|310632861|gb|EFQ16144.1| YihY family protein [Enterococcus faecalis TX0635]
gi|315025881|gb|EFT37813.1| YihY family protein [Enterococcus faecalis TX2137]
gi|315028196|gb|EFT40128.1| YihY family protein [Enterococcus faecalis TX4000]
gi|315035714|gb|EFT47646.1| YihY family protein [Enterococcus faecalis TX0027]
gi|315146132|gb|EFT90148.1| YihY family protein [Enterococcus faecalis TX2141]
gi|315146331|gb|EFT90347.1| YihY family protein [Enterococcus faecalis TX4244]
gi|315154461|gb|EFT98477.1| YihY family protein [Enterococcus faecalis TX0031]
gi|315157121|gb|EFU01138.1| YihY family protein [Enterococcus faecalis TX0043]
gi|315160169|gb|EFU04186.1| YihY family protein [Enterococcus faecalis TX0312]
gi|315164314|gb|EFU08331.1| YihY family protein [Enterococcus faecalis TX1302]
gi|315166495|gb|EFU10512.1| YihY family protein [Enterococcus faecalis TX1341]
gi|315171501|gb|EFU15518.1| YihY family protein [Enterococcus faecalis TX1342]
gi|315575186|gb|EFU87377.1| YihY family protein [Enterococcus faecalis TX0309B]
gi|315578172|gb|EFU90363.1| YihY family protein [Enterococcus faecalis TX0630]
gi|315582613|gb|EFU94804.1| YihY family protein [Enterococcus faecalis TX0309A]
gi|323481264|gb|ADX80703.1| ribonuclease BN [Enterococcus faecalis 62]
gi|327535592|gb|AEA94426.1| YihY family protein [Enterococcus faecalis OG1RF]
Length = 302
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I H V + + ++ LLS+FP ++ N+ +L +V+ +
Sbjct: 13 LMRFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + ++
Sbjct: 71 EAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R++SF +LL V +V + + + ++ F +++ + T +
Sbjct: 131 FILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S
Sbjct: 191 VLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L ILGA +NA + Y
Sbjct: 251 FIILMLWLNFAATIIILGAIVNAVVDEY 278
>gi|126462086|ref|YP_001043200.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17029]
gi|126103750|gb|ABN76428.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17029]
Length = 324
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 121/274 (44%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI E+ +A+ ++ LL++FP + +L G + + + G
Sbjct: 30 DIALRVWRSIDEDRVMLVAAGVTFYLLLALFPALAAFVSLYGLFADPAVIAEQAESLRGV 89
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +T+++ + + + L F +S L A + +++G++AL ++N A+ E R
Sbjct: 90 IPAEGLDLLTEQLRTLASGESSSLTFSFVLSFLIAFWSANSGMKALIEAMNIAHEEREKR 149
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+SF L A V ++ + + V F ++W R +
Sbjct: 150 SFVKLTLLSFALTLGAMV----LAVTMIVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLL 205
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ + + G + W++ ++ FT Y+ F+ YS Y L
Sbjct: 206 LLVATAMAGLYRWAPSRNAPEWRWVTWGSGLATLVWLIASIAFTIYLENFANYSATYGSL 265
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ L+++++ + I+GAE+N+ M R
Sbjct: 266 GALVGLLLWVWIAVMILIVGAEVNSEMEHQTARD 299
>gi|116492143|ref|YP_803878.1| ribonuclease BN-like family protein [Pediococcus pentosaceus ATCC
25745]
gi|116102293|gb|ABJ67436.1| Ribonuclease BN-like family enzyme [Pediococcus pentosaceus ATCC
25745]
Length = 300
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F + ++ F + + + ++ LLS FP ++ +L V T
Sbjct: 4 KVVFRKTKTFLSALLKRFNDSEVVNNSIVLAYYLLLSFFPMVMLMGSLLPLFDIK--VNT 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++ + P I + L L + S L Y +S V A + ++NRAY
Sbjct: 62 VLEYIETVVPVTIYNITEPIVKDFLGSGNGELLSFSLLLTIYSASQAVAAFQRTINRAYD 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ + R+++F ++ + I+ F+F ++Y+ +L +I +
Sbjct: 122 VAKHQNPIVNRIVAFVLTVIIIAIMGILVFLFSFGQTLISYLTPILNLPTHLFDLIGQLK 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T++ LF+GL ++ +P AK K ++PG I I ++ + F+ Y+ F+ T
Sbjct: 182 WPVTIVGLFVGLALLYYLVPNAKIKFKYVIPGSIAATIGTMIISQFFSFYLRIFARSVTS 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L + + + +L + + G LNA+ K
Sbjct: 242 YKTLGTFIAIMFWLNFSAMVVMFGGVLNATWQELREGK 279
>gi|319653355|ref|ZP_08007455.1| hypothetical protein HMPREF1013_04072 [Bacillus sp. 2_A_57_CT2]
gi|317394839|gb|EFV75577.1| hypothetical protein HMPREF1013_04072 [Bacillus sp. 2_A_57_CT2]
Length = 274
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 122/260 (46%), Gaps = 3/260 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+I + E+D + +A+ ++ LLS+FP ++F L +L Q +++VV
Sbjct: 8 LIPNLWRRVEEDDVFGLAAQLAYFFLLSLFPLLIFLVTLVPYLPITQ--QDILNVVRDFA 65
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P K I I ++ L + +A + +SNG+ A+ + N+AY V E R + I
Sbjct: 66 PGETMKLIESNIYEI-TQRNGKLLSFGIIATLWSASNGINAVVKAFNKAYDVKETRHFII 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R ++ V+ + V ++ F G L I R + LF
Sbjct: 125 ARGMAILLTFAMIFVFVLALLLPVFGRQIGLFISSEFGLSGQFLAIWNMVRWLVSPFILF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ P K K +S++PG IF WV+ ++ F++Y+ +F +S Y + +I+
Sbjct: 185 VVFTGLYWIAPNKKLKCISVVPGAIFATAGWVLSSLAFSYYVSSFGNFSATYGSIGAIIV 244
Query: 251 CLVFLYMLGVFFILGAELNA 270
+++ Y+ G+ ILG E+NA
Sbjct: 245 LMIWFYISGIIIILGGEINA 264
>gi|28212101|ref|NP_783045.1| ribonuclease BN [Clostridium tetani E88]
gi|28204544|gb|AAO36982.1| ribonuclease BN [Clostridium tetani E88]
Length = 282
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 2/267 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ I +E++ A+AS +S S LLS FPF++F L GF V+ + P+
Sbjct: 13 KNIINKIIEDEVPALASQLSYSLLLSFFPFLIFLMTLLGFSSIDN--EYVLLELKTMLPD 70
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + ++++L L + S + + SS G A+ +N+AY E RS
Sbjct: 71 SAYELVYNTVIEILGTRDSNLLSFSIIFTVWTSSTGFRAVIKGINKAYDEKEKRSLPKVF 130
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LIS L +++ V L Y+ + L R + +L +
Sbjct: 131 LISILSTLSLGFLIILTVLFLVFGQLIGLYLVQKLKMGSLFYLTWNIIRYIIILSSLVVI 190
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ F+P+ K + ++PG IF + W+ + +F++Y+ F+ YS +Y + +++ +
Sbjct: 191 FALMYKFIPSRKLRWREVMPGAIFATVGWLFSSFIFSYYVNNFANYSRIYGSIGAVIILM 250
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
V+LY+ + ILG ELNA + I+ K
Sbjct: 251 VWLYLTSIIIILGGELNAFISIHESIK 277
>gi|260587882|ref|ZP_05853795.1| YihY family protein [Blautia hansenii DSM 20583]
gi|331083883|ref|ZP_08332992.1| hypothetical protein HMPREF0992_01916 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542147|gb|EEX22716.1| YihY family protein [Blautia hansenii DSM 20583]
gi|330403308|gb|EGG82868.1| hypothetical protein HMPREF0992_01916 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 303
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 122/257 (47%), Gaps = 3/257 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ I+ E A A+ + +LS PF++ + + V+ + PE
Sbjct: 10 KEFIKSMNERHVTAYAAQAAYFIILSFIPFMLVLMTSVKYTPLTK--AEVVHALLQVCPE 67
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + +V + G+ +SA+ A + + G++AL N Y+V E R++ ++R
Sbjct: 68 NFETFIQSIVNEVY-EKSLGVVPVSAVIAMWSAGKGIQALTRGFNSIYQVKETRNFLMSR 126
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + Y L+ +++++ + V + FP + ++ +I + R+ T+ AL +
Sbjct: 127 IRAVFYTLVFVISIILTLTLQVFGNSLQRELSSHFPFMEKIVTMIISMRVVITLSALCVV 186
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ F+P K+ S PG + + W + F+ YI ++ + MY + +I+ L
Sbjct: 187 FLMMYKFIPNRKATFRSQFPGALLCAVCWSAFSFGFSLYIDFYNGAANMYGSMTTIVLVL 246
Query: 253 VFLYMLGVFFILGAELN 269
++LY +F +LGA++N
Sbjct: 247 LWLYFCMMFVMLGAQVN 263
>gi|255972225|ref|ZP_05422811.1| ribonuclease BN [Enterococcus faecalis T1]
gi|255975337|ref|ZP_05425923.1| ribonuclease BN [Enterococcus faecalis T2]
gi|256617227|ref|ZP_05474073.1| ribonuclease BN [Enterococcus faecalis ATCC 4200]
gi|256763001|ref|ZP_05503581.1| ribonuclease BN [Enterococcus faecalis T3]
gi|256853649|ref|ZP_05559014.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256956586|ref|ZP_05560757.1| ribonuclease BN [Enterococcus faecalis DS5]
gi|256963474|ref|ZP_05567645.1| ribonuclease BN [Enterococcus faecalis HIP11704]
gi|257079512|ref|ZP_05573873.1| ribonuclease BN [Enterococcus faecalis JH1]
gi|257082108|ref|ZP_05576469.1| ribonuclease BN [Enterococcus faecalis E1Sol]
gi|257087331|ref|ZP_05581692.1| ribonuclease BN [Enterococcus faecalis D6]
gi|257090465|ref|ZP_05584826.1| ribonuclease BN [Enterococcus faecalis CH188]
gi|257416512|ref|ZP_05593506.1| ribonuclease BN [Enterococcus faecalis AR01/DG]
gi|257419753|ref|ZP_05596747.1| ribonuclease BN [Enterococcus faecalis T11]
gi|257422087|ref|ZP_05599077.1| ribonuclease BN [Enterococcus faecalis X98]
gi|255963243|gb|EET95719.1| ribonuclease BN [Enterococcus faecalis T1]
gi|255968209|gb|EET98831.1| ribonuclease BN [Enterococcus faecalis T2]
gi|256596754|gb|EEU15930.1| ribonuclease BN [Enterococcus faecalis ATCC 4200]
gi|256684252|gb|EEU23947.1| ribonuclease BN [Enterococcus faecalis T3]
gi|256710592|gb|EEU25635.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256947082|gb|EEU63714.1| ribonuclease BN [Enterococcus faecalis DS5]
gi|256953970|gb|EEU70602.1| ribonuclease BN [Enterococcus faecalis HIP11704]
gi|256987542|gb|EEU74844.1| ribonuclease BN [Enterococcus faecalis JH1]
gi|256990138|gb|EEU77440.1| ribonuclease BN [Enterococcus faecalis E1Sol]
gi|256995361|gb|EEU82663.1| ribonuclease BN [Enterococcus faecalis D6]
gi|256999277|gb|EEU85797.1| ribonuclease BN [Enterococcus faecalis CH188]
gi|257158340|gb|EEU88300.1| ribonuclease BN [Enterococcus faecalis ARO1/DG]
gi|257161581|gb|EEU91541.1| ribonuclease BN [Enterococcus faecalis T11]
gi|257163911|gb|EEU93871.1| ribonuclease BN [Enterococcus faecalis X98]
Length = 303
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I H V + + ++ LLS+FP ++ N+ +L +V+ +
Sbjct: 14 LMRFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIA 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + ++
Sbjct: 72 EAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R++SF +LL V +V + + + ++ F +++ + T +
Sbjct: 132 FILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTV 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S
Sbjct: 192 VLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGS 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L ILGA +NA + Y
Sbjct: 252 FIILMLWLNFAATIIILGAIVNAVVDEY 279
>gi|170781551|ref|YP_001709883.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
gi|169156119|emb|CAQ01258.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
Length = 394
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 123/273 (45%), Gaps = 5/273 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVF 67
+ A+ F++ G M + ++ + LS+ P V +L G +G + V V+ V+
Sbjct: 36 WYACRRAVYGFMKHRGIDMTASLTFYSTLSLVPAAVAVLSLIGVVGDTRAGVEGVLAVLT 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ I D + Q+ P G+ FT+S L A + S+ V A ++NR E R
Sbjct: 96 SVLGDSAVDVIRDPVEQLADGPRSGVAFTVSFLGALWTSAAYVTAFGRAMNRVQETEEGR 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
R + G + V V+M + + + + LG+ L++W + +
Sbjct: 156 PLVKYRALMLGVTIALLVVSVVMVGMLLLTDEGARALGQQL-GLGDTTLVVWAVVKWPLL 214
Query: 187 LALFIGLI-FVHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+AL G+I ++ P + + + +L G + ++W +G F Y+ +TY + Y
Sbjct: 215 VALLTGIIGVLYAATPNLRRRRVDLLTWGSLVAIVAWGLGTAGFVAYVTHVATYESTYGV 274
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L +++ L++LY+ + +LG EL+ +I
Sbjct: 275 LGAVIVLLLWLYIGNLSLVLGGELDVEIIRARQ 307
>gi|311746051|ref|ZP_07719836.1| putative ribonuclease BN [Algoriphagus sp. PR1]
gi|126576268|gb|EAZ80546.1| putative ribonuclease BN [Algoriphagus sp. PR1]
Length = 327
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 125/277 (45%), Gaps = 4/277 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ---FVPTVID 64
V+D+ I+ ++D A ++ S L++FP I+F N+ +L ++
Sbjct: 32 VYDVGRIFIQQLQKDDIVERAGSVAFSFTLALFPLILFLLNIIPYLQDFIPIVTTQNILT 91
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P + I+ +++ P + L ++ A + S+ GV ++ S N Y+ E
Sbjct: 92 FIQEMLPGELYAQAETTIMDIVSRPRQSLISLGFFFALFSSTQGVVSMMNSFNSVYQTKE 151
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ TR I+ V + +T+ S V + + + + + + ++ +++ +
Sbjct: 152 NRGFFQTRAIAASIVFILVLTIFAASAVMIIGGVIIRRLDELQLFNSDFMIFLFSTLKFM 211
Query: 185 TMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L +F I F+ F PA K G + +G FT Y+ F++Y+ +Y
Sbjct: 212 VLLFMFYITTAFIFRFAPAVHDKWRFFSTGARLGGLLITLGFYGFTFYLNNFASYNKLYG 271
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++ +++L + + ++ E+N S+ + KK
Sbjct: 272 SIGTLIALMLWLLITSLIVLVCFEVNVSLDLVEEDKK 308
>gi|91205490|ref|YP_537845.1| putative ribonuclease BN [Rickettsia bellii RML369-C]
gi|157827145|ref|YP_001496209.1| putative ribonuclease BN [Rickettsia bellii OSU 85-389]
gi|91069034|gb|ABE04756.1| Putative ribonuclease BN [Rickettsia bellii RML369-C]
gi|157802449|gb|ABV79172.1| Putative ribonuclease BN [Rickettsia bellii OSU 85-389]
Length = 281
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 83/275 (30%), Positives = 137/275 (49%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 KKIFNCLYIALFKTIEHDGVEHSGYMSFMVLLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+VP + L ++ + + + +S+ VE LR LNR Y +
Sbjct: 62 FLESMPERATESIEKRIKELLSVPPQSLMNLAVVGSVWTASSFVECLRTILNRVYEIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S+ + F+ V IP+ + + I+ R
Sbjct: 122 PPYIRRRLLSILQFLVISILITFTMFLLVFIPIVFTKIPVLLETIEQYKNILNFIRYVLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I WV+ L + YIV ++ + MY L
Sbjct: 182 LVLLFLGASSLYYILPNVKLNFIDVFPGALLTVILWVISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
SI+ L+F Y++ + FI GAE N M Y KK
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNYNIVKK 276
>gi|304391893|ref|ZP_07373835.1| ribonuclease BN [Ahrensia sp. R2A130]
gi|303296122|gb|EFL90480.1| ribonuclease BN [Ahrensia sp. R2A130]
Length = 326
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 90/273 (32%), Positives = 150/273 (54%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R V +++I V++ G A+AS+++LS LLS+FPF++ A+L F G +
Sbjct: 24 RTLTYTVLRSGWESIVKLVDDGGLAIASNVALSLLLSLFPFLMLVASLVRFYGNPELAEG 83
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+D+V G WP A PIT + +L PA F+ + A +SNGVE R LNRAY+
Sbjct: 84 VVDLVLGHWPGDAAAPITRTVETLLDQPAGEFFSFGTVIALILASNGVENARDGLNRAYK 143
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ RL +V++ +V ++ +F+ VA P+ + F L L++ G+
Sbjct: 144 VKETRSFLWRRLQGAFFVVVGAVGFILSAFILVATPIVWDFAVSKFDFLEEFGLLVTAGK 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L + L H +LP + + SI+ G++ T + ++G+ LF Y+ + Y+ +
Sbjct: 204 YSIAIVLLGLILFAFHRYLPDTRYRRRSIIWGILLTIGAILLGSYLFGIYLQNIANYTAL 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
YAGLA +M +V+LY + V + GAE N ++
Sbjct: 264 YAGLAGMMVAIVYLYCMSVLMLFGAEFNFALAK 296
>gi|99081021|ref|YP_613175.1| ribonuclease BN, putative [Ruegeria sp. TM1040]
gi|99037301|gb|ABF63913.1| ribonuclease BN putative [Ruegeria sp. TM1040]
Length = 288
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 91/273 (33%), Positives = 147/273 (53%), Gaps = 4/273 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG----FLGAHQFVPTVIDVV 66
I A+ F ++ W ++SHI++S ++++FPF++F +L+G V V+++V
Sbjct: 14 IARRALGRFSRKNAWVLSSHIAMSMMMALFPFVLFTVSLSGAIASLFSHRIVVDDVVNLV 73
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
FG+WP+ +A+PIT E+ VL GL T+ + A YF+SNGV+A+RI++ RAY E R
Sbjct: 74 FGSWPQSVAEPITREVYAVLETSGTGLMTLGGVLALYFASNGVDAIRIAMLRAYGQEETR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ RLIS G V+L L++ + + +PL +V +FFP L L
Sbjct: 134 PFWKHRLISLGLVILGGAGLLLTAVFELFLPLGARFVGRFFPDLDFLRGWEQGANGLVVA 193
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + HL L + + +LPG + T + W F Y+ +F++YS YAGLA
Sbjct: 194 VIPVAAVFLYHLVLLPKRETLRHVLPGALVTLVLWWASGAGFAFYVSSFASYSATYAGLA 253
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
M L+FLY+ ILGAE+N + +
Sbjct: 254 GAMAALIFLYLNAAILILGAEINGVLQTDRQAR 286
>gi|332558089|ref|ZP_08412411.1| Ribonuclease BN family protein [Rhodobacter sphaeroides WS8N]
gi|332275801|gb|EGJ21116.1| Ribonuclease BN family protein [Rhodobacter sphaeroides WS8N]
Length = 322
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 121/274 (44%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI E+ +A+ ++ LL++FP + +L G + + + G
Sbjct: 28 DIALRVWRSIDEDRVMLVAAGVTFYLLLALFPALAAFVSLYGLFADPAVIAEQAESLRGV 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +T+++ + + + L F +S L A + +++G++AL ++N A+ E R
Sbjct: 88 IPAEGLDLLTEQLRTLASGESSSLTFSFVLSFLIAFWSANSGMKALIEAMNIAHEEREKR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+SF L A V ++ + + V F ++W R +
Sbjct: 148 SFVKLTLLSFALTLGAMV----LAVTMIVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLL 203
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ + + G + W++ ++ FT Y+ F+ YS Y L
Sbjct: 204 LLVATAMAGLYRWAPSRNAPEWRWVTWGSGLATLVWLIASIAFTIYLENFANYSATYGSL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ L+++++ + I+GAE+N+ M R
Sbjct: 264 GALVGLLLWVWIAVMILIVGAEVNSEMEHQTARD 297
>gi|300774226|ref|ZP_07084093.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300758905|gb|EFK55734.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 322
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 115/272 (42%), Gaps = 2/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ + + E AS ++ + LL++FP I+F + ++ F +++ +
Sbjct: 34 LYTVGIFFFQEIARESILNKASSLAYNFLLAMFPAIIFLFTMIPYIPIDNFQEQLLEFLK 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + ++ GL + + AA+FS+NG+ L ++ N+A E RS
Sbjct: 94 VIIPHNAFDVIQTTLEDIIKNQNGGLLSFGFVLAAFFSTNGMHTLMLAFNKASLTTENRS 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW--NGRIYAT 185
W RL++ V L + +F + + Y++ + R
Sbjct: 154 WIRQRLVALALSFTIIVALTVGMGIFTFAGIVINYLKSNISVDVSWFWTFIIKAARWIIL 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
F + ++ F PA+ K PG I ++ F +YI F Y+ +Y +
Sbjct: 214 FGIYFFTVSCLYKFGPASNQKWKLFSPGATLATILAILTFSGFAYYINHFGAYNKLYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+I+ ++++Y+ + ++G ELNAS+ +
Sbjct: 274 GTIIVIMIWMYLNSLILLVGYELNASIALSKQ 305
>gi|13476680|ref|NP_108249.1| hypothetical protein mll8068 [Mesorhizobium loti MAFF303099]
gi|14027441|dbj|BAB53710.1| mll8068 [Mesorhizobium loti MAFF303099]
Length = 353
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + +E F ++ +A+ + LL++FP + ++ GF+ V + + G
Sbjct: 59 DIFWRLLEEFNKDRVLLVAAGATFYLLLALFPALAAFISIYGFVADPVTVADHVAYLGGL 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I ++ + L F I A + S++G++AL ++N AY E R
Sbjct: 119 LPSGGLDLIRGQLQALAMQKPGALGIGFFIGLGIALWSSNSGMKALFDAMNIAYEEREKR 178
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+S + + A + +++ +P L Y + A L+ + R +
Sbjct: 179 SFITLNLMSILFTVGALLIGIVLLLTVGVVPALLRYF--YLDAWTETLVAV--SRWPILV 234
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+ G+ ++ F P+ ++K + G + +W+ + LF+ Y+ F+ Y+ Y L
Sbjct: 235 AAMLTGISLLYRFGPSRERAKWRWLSSGALIATAAWIAASWLFSFYLQHFANYNATYGSL 294
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+++ +++ ++ + I GA +NA M
Sbjct: 295 GAVVGLMMWTWISVIILIAGAAINAEME 322
>gi|304386338|ref|ZP_07368671.1| YihY family protein [Pediococcus acidilactici DSM 20284]
gi|304327695|gb|EFL94922.1| YihY family protein [Pediococcus acidilactici DSM 20284]
Length = 304
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 123/278 (44%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + ++ F E + + ++ LLS FP ++ L V T
Sbjct: 8 KVFLRKSETFLKALLKRFNEAEVVNNSIVLAYYLLLSFFPLVMLLGTLLPLFQIR--VNT 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++ + A PE I + L LF+ S + + +S V A + ++NRAY
Sbjct: 66 VLEYIETAVPETIYNITEPIVKDFLGSGNGELFSFSLVMTVFSASQAVAAFQRTVNRAYG 125
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ I R++SF ++ + ++ F+F ++Y+ +L ++ +
Sbjct: 126 VAKYQNPIINRVVSFFLTVVIIAIMAVLVFLFSFGQTLVSYLTPILNLPTHLFALVGQLK 185
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T++ LF+GL ++ +P AK + ++PG +F I +V + +F+ Y+ F+ T
Sbjct: 186 WPVTIVGLFVGLSLLYYLVPNAKIRFKYVIPGTVFATIGTMVLSQVFSFYLRIFARSVTS 245
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L + + + +L + + G LNA+ K
Sbjct: 246 YKTLGTFIAIMFWLNFSAMIIMFGGVLNATWQELREGK 283
>gi|221639073|ref|YP_002525335.1| Ribonuclease BN family protein [Rhodobacter sphaeroides KD131]
gi|221159854|gb|ACM00834.1| Ribonuclease BN family protein [Rhodobacter sphaeroides KD131]
Length = 322
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 121/274 (44%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI E+ +A+ ++ LL++FP + +L G + + + G
Sbjct: 28 DIALRVWRSIDEDRVMLVAAGVTFYLLLALFPALAAFVSLYGLFADPAVIAEQAESLRGV 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +T+++ + + + L F +S L A + +++G++AL ++N A+ E R
Sbjct: 88 IPAEGLDLLTEQLRTLASGESSSLTFSFVLSFLIAFWSANSGMKALIEAMNIAHEEREKR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+SF L A V ++ + + V F ++W R +
Sbjct: 148 SFVKLTLLSFALTLGAMV----LAVTMIVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLL 203
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ + + G + W++ ++ FT Y+ F+ YS Y L
Sbjct: 204 LLVATAMAGLYRWAPSRNAPEWRWVTWGSGIATLVWLIASIAFTIYLENFANYSATYGSL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ L+++++ + I+GAE+N+ M R
Sbjct: 264 GALVGLLLWVWIAVMILIVGAEVNSEMEHQTARD 297
>gi|89070971|ref|ZP_01158197.1| Ribonuclease BN [Oceanicola granulosus HTCC2516]
gi|89043478|gb|EAR49692.1| Ribonuclease BN [Oceanicola granulosus HTCC2516]
Length = 279
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 10/250 (4%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
++ LL++FP I +AG + + + + G P+ A + + +V
Sbjct: 1 MAFYGLLALFPAITAMIAIAGLVMEPAQITEQLQALGGMLPQDAADILIGQAQEVAGSRE 60
Query: 91 KGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
GL + L A Y +S GV +L +N AY + R + ++ L+ V +V
Sbjct: 61 GGLGLAAVLGILLALYSASKGVSSLMEGINVAYDEEDQRGFIKRTALTLALTLVLIVGIV 120
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG-LIFVHLFLPAAK-S 205
+ V +P L V LG + I+ +A +L L +G ++ F P +
Sbjct: 121 LGLASTVVLPAVLNVVD-----LGPVTEILIAAFRWALLLVLAVGGFALLYRFAPDRSSA 175
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++ + PG I I W+V V F Y F +Y+ + L ++ L++L++ ++G
Sbjct: 176 RMKWLTPGAIVGCILWIVATVGFAIYADNFGSYNESFGALGGVIVLLMWLWLSSYAVLMG 235
Query: 266 AELNASMIIY 275
AE+N+ + +
Sbjct: 236 AEINSEIELQ 245
>gi|331085373|ref|ZP_08334459.1| hypothetical protein HMPREF0987_00762 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408156|gb|EGG87646.1| hypothetical protein HMPREF0987_00762 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 277
Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+E + ++ ++ E A A+ + +LS+ PFI+ L + +
Sbjct: 1 MKETIMKKYRLLNRIMDRISENHTGAYAAQSAFFIVLSMIPFIMLLLALVQYTPVTK--A 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI V P+ I I + QV ++ + +++ L A + + GV A+ LN Y
Sbjct: 59 DVIRAVTHVLPKTIYPMIVSIVNQVY-NQSQAMISLTGLVAIWSAGRGVLAMSAGLNSVY 117
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E R++ RL + Y +L + +V+ + ++ +P + ++ +I N
Sbjct: 118 GSKETRNYIYLRLRAAFYTVLFIIAIVLSLVILGFGDRLSIFIVNHYPFMKGIIDLIINI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R A+++ L + + ++ FLP K+K + PG T I W + +F+ Y+ F+ +ST
Sbjct: 178 RAVASIVVLTVFSMTIYHFLPNKKTKFIRQFPGAFLTAIGWAAASYIFSAYVNIFTGFST 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELN 269
MY + +IM +++LY +LG E+N
Sbjct: 238 MYGSMTTIMLIMLWLYACMYIMLLGGEVN 266
>gi|3608389|gb|AAC35915.1| Orfde2 [Enterococcus faecalis OG1RF]
Length = 302
Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I H V + + ++ LLS+FP ++ N+ +L +V+ +
Sbjct: 13 LMRFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + ++
Sbjct: 71 EAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R++SF +LL V +V + + + ++ F +++ + T +
Sbjct: 131 FILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S
Sbjct: 191 VLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L ILGA +NA + Y
Sbjct: 251 FIILMLWLNFAATIIILGAIVNAVVDEY 278
>gi|329770330|ref|ZP_08261713.1| hypothetical protein HMPREF0433_01477 [Gemella sanguinis M325]
gi|328836688|gb|EGF86344.1| hypothetical protein HMPREF0433_01477 [Gemella sanguinis M325]
Length = 301
Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + ++ +++++S +LS+FP ++ L + Q ++D +
Sbjct: 21 FKKFCKEMYYRIMYDEISLLSANLSYYFILSLFPMLIVAMALTPYFNIDQ--KFLLDKIQ 78
Query: 68 GAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I I +VL + L T+ + + +SNG+ + I+ N A+RV + R
Sbjct: 79 SFAPGELGDFIFGMISEVLNSKSNNTLITLGIVFTLWSASNGIYGIIIAFNNAFRVRDGR 138
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W +T+L+S + +L V + ++ + V + F +
Sbjct: 139 IWIVTKLMSILFTVLFLVGMFLVLALVVFGKQLTYLLFHKFNLDEGFYNGWSYLSYSFPI 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L FI +F+++F P + K +SILPG +F+ ISW + + LF +YI FS+Y Y +
Sbjct: 199 LFTFIVFVFLYIFGPNLRLKAISILPGAVFSTISWTLVSRLFGYYIDHFSSYIKTYGTIG 258
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ M +++LY+ G ILGAE+NA Y +
Sbjct: 259 AFMAFIMWLYITGFILILGAEINAIFHNYRVEHR 292
>gi|13488510|ref|NP_109517.1| hypothetical protein mll9669 [Mesorhizobium loti MAFF303099]
gi|14028264|dbj|BAB54856.1| mll9669 [Mesorhizobium loti MAFF303099]
Length = 356
Score = 181 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + E F ++ +A+ + LL++FP + ++ GF+ V + + G
Sbjct: 62 DIFWRLWEEFSKDRVLLVAAGATFYLLLALFPALAAFISIYGFVADPVTVADHVAYLGGL 121
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I ++ + + L F I A + S++G++AL ++N AY E R
Sbjct: 122 LPSGGLDLIRGQLQALASQKPGALGIGFFIGLGIALWSSNSGMKALFDAMNIAYEEREKR 181
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S L+S + + A + +++ +P L Y + A L+ + R +
Sbjct: 182 SIIALNLMSILFTVGALLIGILLLLTVGVVPALLRYF--YLDAWTETLVAV--SRWPILV 237
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+ G+ ++ F P+ ++K + G + ++W+ + LF+ Y+ F+ Y+ Y L
Sbjct: 238 GAMLTGISLLYRFGPSRERAKWRWLSWGSLIATVAWIAASWLFSFYLQHFANYNATYGSL 297
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+++ +++ ++ + I GA +NA M
Sbjct: 298 GAVVGLMMWTWISVIILIAGAAINAEME 325
>gi|298293294|ref|YP_003695233.1| ribonuclease BN [Starkeya novella DSM 506]
gi|296929805|gb|ADH90614.1| ribonuclease BN [Starkeya novella DSM 506]
Length = 375
Score = 181 bits (461), Expect = 8e-44, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 116/273 (42%), Gaps = 8/273 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ DI+ F + ++++ ++ LL++FP + +L G + + ++
Sbjct: 77 YRGWRDILIRTFNEFFADRVLSLSAGVTFYTLLAIFPALAAFISLYGLFLDPASIQSQLE 136
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYR 121
P + + D+I ++LA L S A + ++ G +A+ +LN AY
Sbjct: 137 AASWFLPAGAVEVMRDQIARLLANGPSSLGLRSFFSLALALWSANAGTKAVIEALNIAYE 196
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS+ L ++ ++ + V +A +AL V K +I R
Sbjct: 197 EEERRSFVRL----TLTTLGFTLAAILFAVVALAAVVALPLVLKVLYLPSGTEWLISLLR 252
Query: 182 IYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A + + + V+ F P + + G + W+ +V F+ Y+ F++Y
Sbjct: 253 WPALAVVVAFVITVVYRFGPCRQRPQWRWVSMGSAVAAVLWLATSVGFSWYVSRFASYEQ 312
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y L +++ +V++++ +LGAELNA +
Sbjct: 313 TYGSLGAVVGFMVWIWLSVTVVLLGAELNAEIE 345
>gi|270290818|ref|ZP_06197042.1| ribonuclease BN family enzyme [Pediococcus acidilactici 7_4]
gi|270280878|gb|EFA26712.1| ribonuclease BN family enzyme [Pediococcus acidilactici 7_4]
Length = 300
Score = 181 bits (461), Expect = 8e-44, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 123/278 (44%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + ++ F E + + ++ LLS FP ++ L V T
Sbjct: 4 KVFLRKSETFLKALLKRFNEAEVVNNSIVLAYYLLLSFFPLVMLLGTLLPLFQIR--VNT 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++ + A PE I + L LF+ S + + +S V A + ++NRAY
Sbjct: 62 VLEYIETAVPETIYNITEPIVKDFLGSGNGELFSFSLVMTVFSASQAVAAFQRTVNRAYG 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ I R++SF ++ + ++ F+F ++Y+ +L ++ +
Sbjct: 122 VAKYQNPIINRVVSFFLTVVIIAIMAVLVFLFSFGQTLVSYLTPILNLPTHLFALVGQLK 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T++ LF+GL ++ +P AK + ++PG +F I +V + +F+ Y+ F+ T
Sbjct: 182 WPVTIVGLFVGLSLLYYLVPNAKIRFKYVIPGTVFATIGTMVLSQVFSFYLRIFARSVTS 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L + + + +L + + G LNA+ K
Sbjct: 242 YKTLGTFIAIMFWLNFSAMIIMFGGVLNATWQELREGK 279
>gi|239983428|ref|ZP_04705952.1| ribonuclease BN family membrane protein [Streptomyces albus J1074]
Length = 297
Score = 181 bits (461), Expect = 8e-44, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + F +++ A+ ++ +L++FP ++ +L G G V++ +
Sbjct: 1 MLRRTVAEFQDDELADRAAALTYYGVLALFPGLLVLVSLLGVAG-ESTTRRVLESIKKMA 59
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +T + V G L + LAA + +S V A S N Y + E R
Sbjct: 60 PGPARDVVTSAVEGVQGAGGVGSLLAVVGVLAALWSASGYVGAFIRSSNAVYDMPEGRPV 119
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G + A V + + S + V LA +G+ L +W+ + +L
Sbjct: 120 WKVLPVRVGTTV-ALVVMAVGSALIVVFTGDLARRAGSLLGIGDTALTVWSIAKWPVLLL 178
Query: 189 LFIGLI-FVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L IG+I + P K + PG + W++ + F Y+ F +Y+ Y LA
Sbjct: 179 LVIGMIALLFWAAPNTKGPGFRWVTPGSFLALVIWLLASAGFAVYVANFGSYNKTYGALA 238
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 239 GVVVFLVWLWISNIAILLGLEFDAELARER 268
>gi|325660901|ref|ZP_08149529.1| hypothetical protein HMPREF0490_00261 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472975|gb|EGC76185.1| hypothetical protein HMPREF0490_00261 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 277
Score = 181 bits (461), Expect = 8e-44, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 3/269 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+E + ++ + E A A+ + +LS+ PFI+ L + +
Sbjct: 1 MKETIMKKYRLLNRIMNRISENHTGAYAAQSAFFIVLSMIPFIMLLLALVQYTPVTK--A 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI V P+ I I + QV ++ + +++ L A + + GV A+ LN Y
Sbjct: 59 DVIRAVTHVLPKTIYPMIVSIVNQVY-NQSQAMISLTGLVAIWSAGRGVLAMSAGLNSVY 117
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E R++ RL + Y +L + +V+ + ++ +P + ++ +I N
Sbjct: 118 GSKETRNYIYLRLRAAFYTVLFIIAIVLSLVILGFGDRLSIFIVNHYPFMKGIIDLIINI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R A+++ L + + ++ FLP K+K + PG T I W + +F+ Y+ F+ +ST
Sbjct: 178 RAVASIVVLTVFSMTIYHFLPNKKTKFIRQFPGAFLTAIGWAAASYIFSAYVNIFTGFST 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELN 269
MY + +IM +++LY +LG E+N
Sbjct: 238 MYGSMTTIMLIMLWLYACMYIMLLGGEVN 266
>gi|227513933|ref|ZP_03943982.1| ribonuclease BN [Lactobacillus fermentum ATCC 14931]
gi|227087692|gb|EEI23004.1| ribonuclease BN [Lactobacillus fermentum ATCC 14931]
Length = 308
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + EHF A+ ++ LLS+FP ++ NL LG
Sbjct: 11 MKFIGTKLKRFVTVFAEHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLD--AK 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + + I I L + G+ T AL A + +S G+ A + S+N AY
Sbjct: 69 TVLPYLQSAIPSSVYQFIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAY 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ I R++SF ++++ + + + ++ L ++ N + + +
Sbjct: 129 GVAKNQNPIINRVLSFIWMIIVIMIIFALVIMYGLGEQVLEALQPILHFPINYVTLFSSL 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R T LFI L ++ F+P A+ ++ ++ G + + W+ + LF++Y V F+
Sbjct: 189 RWPVTFGGLFIFLTLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLN 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y + + + +++L G+ ++GA +NA+
Sbjct: 249 SYKTIGAFILMMMWLDFSGMIVMIGAIVNAT 279
>gi|241889551|ref|ZP_04776849.1| ribonuclease BN [Gemella haemolysans ATCC 10379]
gi|241863173|gb|EER67557.1| ribonuclease BN [Gemella haemolysans ATCC 10379]
Length = 300
Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 125/273 (45%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + + ++ +++++S +LS+FP ++ L + Q +++ +
Sbjct: 21 IKKFVKEMYYRLMYDEISLLSANLSYYFILSLFPMLIVALALTPYFKIDQ--QFLLEKIQ 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + D I +VL + T+ + + +S+G+ + I+ N A+RV + R
Sbjct: 79 NYAPGDLGNYLFDMISEVLNNKNNTIITVGIVFTLWSASSGIYGIIIAFNNAFRVRDGRI 138
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W +T++IS L V + + + V + F + +L
Sbjct: 139 WIVTKIISVILTALFLVGMFLALALIVFGKQLTYILFHKFNLDQGFYNLWSVINYTLPLL 198
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F +F++ P K K +SILPG +F +SW + + LF +YI FS+Y Y + +
Sbjct: 199 FIFFVFVFLYTMGPNLKLKAISILPGALFATLSWTIVSRLFGYYIDHFSSYIKTYGTIGA 258
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M +++LY+ G I+GAE+NA Y +
Sbjct: 259 FMAFILWLYITGYILIIGAEINAIFHNYKVEHR 291
>gi|313675805|ref|YP_004053801.1| ribonuclease bn [Marivirga tractuosa DSM 4126]
gi|312942503|gb|ADR21693.1| ribonuclease BN [Marivirga tractuosa DSM 4126]
Length = 311
Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 57/281 (20%), Positives = 123/281 (43%), Gaps = 1/281 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F + I+ + + A++++ L++FP I+F L +L
Sbjct: 27 LKRSGVSYFTLFKIFIQELSDHNLIERANNVAFQFTLAIFPTIIFLFTLIPYLPIDNLQQ 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ ++ P + + I+ +L+ L ++ + A YF++NG AL + N+ Y
Sbjct: 87 EVMSLLEETMPGSVYEVAQSTIVDILSKSRGDLLSVGFIFALYFATNGTSALMTAFNQTY 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + R + + I+ G L + LV + + + ++ F + + I+ G
Sbjct: 147 RTKDSRGFVKAKAIAIGLTFLLAFVLVTSIVLLIVAQQVIYFLEDFGIISDSFEVYIFIG 206
Query: 181 RIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + LF I + ++ + PA + PG I + + F+ YI F TY+
Sbjct: 207 LRFLVIFFLFQIAISVIYYWAPAIHKRWHFFNPGSILATFLCLAVSFGFSFYINNFGTYN 266
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y + +++ +++ L +F I+G +LN S+ + K
Sbjct: 267 KLYGSIGALIAIMIWFSFLSLFLIVGLQLNVSLEKARIKNK 307
>gi|329569816|gb|EGG51575.1| YihY family protein [Enterococcus faecalis TX1467]
Length = 302
Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 65/278 (23%), Positives = 135/278 (48%), Gaps = 6/278 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I H V + + ++ LLS+FP ++ N+ +L +V+ +
Sbjct: 13 LMRFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P+ + K + I +L + GL ++SALAA +S + AL+ ++N+A+ V + ++
Sbjct: 71 EAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFCSASQSINALQNAMNKAFGVEQRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R++SF +LL V +V ++ + + ++ F +++ + T +
Sbjct: 131 FILVRVVSFLVILLFMVAIVGVAVILGLGQYIIELLQHLFHYSTSVIDTFQALKWPLTTV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S
Sbjct: 191 VLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY----YWRKKP 281
+ +++L ILGA +NA + Y +K+P
Sbjct: 251 FIILMLWLNFAATIIILGAIVNAVVDEYLSGDKEKKQP 288
>gi|254476019|ref|ZP_05089405.1| ribonuclease BN [Ruegeria sp. R11]
gi|214030262|gb|EEB71097.1| ribonuclease BN [Ruegeria sp. R11]
Length = 309
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 55/271 (20%), Positives = 109/271 (40%), Gaps = 8/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ A + G +A+ ++ LLSVFP + L G + +
Sbjct: 42 RLMWHAWQRMDRAKGGLLAAGVAFYGLLSVFPGMTAAVALFGMFADPTVITEQSAWLTRL 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMR 126
P A + +++ V L + L A + +S +L LN Y E R
Sbjct: 102 LPPSAADLLNGQLVDVAMERPDRLGWAAILSISIAFWSASRAANSLMQGLNVIYNRAERR 161
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + A V + + V AIP ALA P L ++ ++ R
Sbjct: 162 GMVMLYIRQLIITFAAIVGALFLVLVVAAIPAALALFGD-SPLLSDIAQVV---RWPLMF 217
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ +G+ ++ F P + + I PG + WV G++ F++Y+ F +YS + L
Sbjct: 218 VSGMVGISLLYRFGPDRRGEEWHRITPGAFVSCSLWVAGSIGFSYYVRVFGSYSETFGTL 277
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ ++ L ++++ + GA ++A +
Sbjct: 278 SGVVLLLTWMWLSAFVVLYGAGIDAERPEHR 308
>gi|315149181|gb|EFT93197.1| YihY family protein [Enterococcus faecalis TX0012]
Length = 302
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I H V + + ++ LLS+FP ++ N+ +L +V+ +
Sbjct: 13 LMRFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P+ + + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + ++
Sbjct: 71 EAIPKDVYMNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R++SF +LL V +V + + + ++ F +++ + T +
Sbjct: 131 FILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S
Sbjct: 191 VLLVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L ILGA +NA + Y
Sbjct: 251 FIILMLWLNFAATIIILGAIVNAVVDEY 278
>gi|257870278|ref|ZP_05649931.1| ribonuclease BN [Enterococcus gallinarum EG2]
gi|257804442|gb|EEV33264.1| ribonuclease BN [Enterococcus gallinarum EG2]
Length = 307
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 2/258 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
E + + ++ LLS+FP ++ NL FL V+ V P + +
Sbjct: 23 RITESEMGTTSVVVAYYLLLSLFPLLIAIGNLLPFLSIAP--SNVLPYVQELIPGQVYEF 80
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
I I +L + GL +ISALAA + +S + AL+I++N+A+ V + ++ + R +SF
Sbjct: 81 IGPAIENLLTSGSGGLLSISALAALWSASQSINALQIAMNKAFGVDQRSNFIVVRAVSFV 140
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+LL + +V ++ V + L +++ F +L+ + T++AL L+ ++
Sbjct: 141 IILLFMIAIVGVTMVIGLGKIILDFLQPIFHIQDDLIATFQTVKWPLTIIALLFILMLIY 200
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+P AK K+ S LPG +F W++ + +F Y F+ + Y + S + +++L +
Sbjct: 201 WLVPNAKVKLRSTLPGAVFATAGWMLLSQVFGLYARFFAARISGYQIIGSFIVLMIWLNL 260
Query: 258 LGVFFILGAELNASMIIY 275
ILG +NA + Y
Sbjct: 261 AATIIILGGIINAVVEEY 278
>gi|182418163|ref|ZP_02949463.1| YihY family protein [Clostridium butyricum 5521]
gi|237666283|ref|ZP_04526270.1| YihY family protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377981|gb|EDT75521.1| YihY family protein [Clostridium butyricum 5521]
gi|237658373|gb|EEP55926.1| YihY family protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 285
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 129/277 (46%), Gaps = 2/277 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ +++ I ++D +A++S ++ +LS FPF++F L GF
Sbjct: 5 KFSIRRQINLLIHLIVKIKKDDVFALSSQLAYYLILSFFPFMIFLITLIGFSHLSSV--E 62
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+D + P I I +V+ GL +S L + SS+ A+ +N+AY
Sbjct: 63 VLDNLNAILPTSIVDLTKSIIAEVVDNQHTGLLGVSVLLMIWTSSSAFRAVIKGVNKAYG 122
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS+ +IS ++L +V +++ + V + AY+ P ++ + R
Sbjct: 123 FKENRSFIKRSIISMIGIILLAVIILLALAMLVFGNVIGAYIISRIPFYKIIIFLWNMFR 182
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +++F PA + K+ ++PG +F+ + W+ + F+ YI F YS
Sbjct: 183 YAFVFIVMIFIFALMYMFAPAKRLKLKEVVPGSVFSTMGWIAVSFGFSFYINNFGNYSRF 242
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L ++ + +L+++ + FILG E+N M ++
Sbjct: 243 YGSLGAVFILMTWLFLISMIFILGVEINCVMSQIKYK 279
>gi|255327084|ref|ZP_05368160.1| tRNA processing ribonuclease BN [Rothia mucilaginosa ATCC 25296]
gi|255296301|gb|EET75642.1| tRNA processing ribonuclease BN [Rothia mucilaginosa ATCC 25296]
Length = 463
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 61/276 (22%), Positives = 120/276 (43%), Gaps = 6/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVV 66
+ I+ AI F G MA+ ++ +LS+FP ++ +L G G + ++ +
Sbjct: 49 ILYILRRAIYKFGANGGTDMAAALTYFTVLSIFPALLAIVSLLGVFGHGEESAAVILAFL 108
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + D I Q+ GL L+A + +S + +LN Y V E
Sbjct: 109 KDNAPAQMYAILEDPIKQITGDHGAGLVLLTGILSALWSASGYTGSFGRALNTVYNVREG 168
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN--LLLIIWNGRIY 183
R +I + ++ + + +V+M + + L V ++ P + L+ +IW +
Sbjct: 169 RPGWILKPLNVFVTTVLIILVVLMMLMMLLGVTVLDMVGQYVPETVDMELIKLIWLNGRW 228
Query: 184 ATMLALFIGLI-FVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + IGLI ++ P + K + PG +G FT Y FS Y+
Sbjct: 229 ILILFMAIGLITLLYAATPNVRRFKQWKLSPGAALALFGMGLGGFGFTLYANNFSKYNAT 288
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + ++ L+F++++ + GA L+A +++
Sbjct: 289 YGLIGGVIVMLLFIWIMNNMLLFGAHLDAEIMLMRQ 324
>gi|87198076|ref|YP_495333.1| ribonuclease BN [Novosphingobium aromaticivorans DSM 12444]
gi|87133757|gb|ABD24499.1| ribonuclease BN [Novosphingobium aromaticivorans DSM 12444]
Length = 344
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 2/265 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++++ + G A +++ ++++FPF + GA L F G ID V
Sbjct: 49 WEVVKRVWTGVFND-GSIHAGNLAYMIIIALFPFFITGAALFSFFGEASQRAAAIDTVLI 107
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A P V+A I V+ L + + + + VE +R L RAY +
Sbjct: 108 AMPPVVAATIEPAARSVIEARTGWLLWVGGIFGLWTVGSLVETIRDILRRAYGTRWEHAL 167
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ RL+S G L + V +++ F V I A + F P G+L+ + R +
Sbjct: 168 WRYRLMSTGITLASVVLILLAIFAQVLIGAAQEVIEAFLPQFGDLVASLSLSRFVPAFVL 227
Query: 189 L-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ L+F+ L A + + PG +F I W+ + + TF +Y Y LA
Sbjct: 228 YAALWLLFISLTPGAYRGRDYPKWPGALFVTIWWIAVTTVLPGMLRTFFSYDLTYGSLAG 287
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
IM L F +++G+ ++GAELNA++
Sbjct: 288 IMIALFFFWLVGLGMVVGAELNAAL 312
>gi|299137399|ref|ZP_07030581.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
gi|298600804|gb|EFI56960.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
Length = 343
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 117/274 (42%), Gaps = 6/274 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVIDVVFGAW 70
+ + ++ + A+ + L ++FP +V +++ G A + +++ +
Sbjct: 43 KRTFQAMMSDNLLSRAAEMGYYFLFALFPTLVCASSILGLAARQASRIYDSLLHYLALVV 102
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + Q A G T+ +AA + +S G A++ +N Y+V E R ++
Sbjct: 103 PGSAYNMVIETFNQTAAAATGGKITLGLVAALWSASVGFAAIQDGMNTVYKVRESRPYWK 162
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLA--LAYVRKFFPALGNL-LLIIWNGRIYATML 187
R + +L SV + V + L L YVR + AL +++ +
Sbjct: 163 ARGAAILVTMLLSVMVTANLGVLLGGDLIAKLVYVRIWHHALATTTAIVVHLVQWVVASG 222
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + ++ F P K+K I PG WV+ ++ Y+ F +S Y L
Sbjct: 223 LLLLQFSTIYYFAPDLKAKRWHWITPGAAIGISGWVLASLGLRVYLHFFDNFSLTYGSLG 282
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ L + Y+ G+ +LGAE+N+ + K+
Sbjct: 283 AVIILLTWFYITGLMLLLGAEINSEIQAAVIEKQ 316
>gi|184155905|ref|YP_001844245.1| hypothetical protein LAF_1429 [Lactobacillus fermentum IFO 3956]
gi|183227249|dbj|BAG27765.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
Length = 308
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + EHF A+ ++ LLS+FP ++ NL LG
Sbjct: 11 MKFIGTKLKSFVTVFAEHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLD--AK 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + + I I L + G+ T AL A + +S G+ A + S+N AY
Sbjct: 69 TVLPYLQSAIPSSVYQFIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAY 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ I R++SF ++++ + + + ++ L ++ N + + +
Sbjct: 129 GVAKNQNPIINRVLSFIWMIIVIMIIFALVIMYGLGEQVLEALQPILHFPINYVTLFSSL 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R T LFI L ++ F+P A+ ++ ++ G + + W+ + LF++Y V F+
Sbjct: 189 RWPVTFGGLFIFLTLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLN 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y + + + +++L G+ ++GA +NA+
Sbjct: 249 SYKTIGAFILMMMWLDFSGMIVMIGAIVNAT 279
>gi|227538328|ref|ZP_03968377.1| TRNA-processing ribonuclease BN [Sphingobacterium spiritivorum ATCC
33300]
gi|227241843|gb|EEI91858.1| TRNA-processing ribonuclease BN [Sphingobacterium spiritivorum ATCC
33300]
Length = 322
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 115/272 (42%), Gaps = 2/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ + + E AS ++ + LL++FP I+F + ++ F +++ +
Sbjct: 34 LYTVGIFFFQEIARESILNKASSLAYNFLLAMFPAIIFLFTMIPYIPIDNFQEQLLEFLK 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + ++ GL + + AA+FS+NG+ L ++ N+A E RS
Sbjct: 94 VIIPHNAFGVIQTTLEDIIKNQNGGLLSFGFVLAAFFSTNGMHTLMLAFNKASLTTENRS 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW--NGRIYAT 185
W RL++ V L + +F + + Y++ + R
Sbjct: 154 WVRQRLVALALSFTIIVALTVGMSIFTFAGIVINYLKSNISVDVSWFWTFIIKAARWIIL 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
F + ++ F PA+ K PG I ++ F +YI F Y+ +Y +
Sbjct: 214 FGIYFFTVSCLYKFGPASNQKWKLFSPGATLATILAILTFSGFAYYINHFGAYNKLYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+I+ ++++Y+ + ++G ELNAS+ +
Sbjct: 274 GTIIVIMIWMYLNSLILLVGYELNASIALSKQ 305
>gi|260662842|ref|ZP_05863736.1| ribonuclease BN [Lactobacillus fermentum 28-3-CHN]
gi|260552923|gb|EEX25922.1| ribonuclease BN [Lactobacillus fermentum 28-3-CHN]
Length = 299
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + EHF A+ ++ LLS+FP ++ NL LG
Sbjct: 2 MKFIDTKLKRFVTVFAEHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLD--AK 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + + I I L + G+ T AL A + +S G+ A + S+N AY
Sbjct: 60 TVLPYLQSAIPSSVYQFIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAY 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ I R++SF ++++ + + + ++ L ++ N + + +
Sbjct: 120 GVAKNQNPIINRVLSFIWMIIVIMIIFALVIMYGLGEQVLEALQPILHFPINYVTLFSSL 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R T LFI L ++ F+P A+ ++ ++ G + + W+ + LF++Y V F+
Sbjct: 180 RWPVTFGGLFIFLTLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLN 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y + + + +++L G+ ++GA +NA+
Sbjct: 240 SYKTIGAFILMMMWLDFSGMIVMIGAIVNAT 270
>gi|292572111|gb|ADE30026.1| Putative ribonuclease BN [Rickettsia prowazekii Rp22]
Length = 283
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 135/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + +Y A+ +++DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKILNCLYVALFRTIKDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIIGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPIIFTKIPIILETIEQYKIILNFIRYSLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T + W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFVDVFPGAVLTVVLWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|85375509|ref|YP_459571.1| hypothetical protein ELI_13410 [Erythrobacter litoralis HTCC2594]
gi|84788592|gb|ABC64774.1| conserved hypothetical membrane protein [Erythrobacter litoralis
HTCC2594]
Length = 339
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 64/254 (25%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ A+L++FPF + GA + +G I+ V A P +A I
Sbjct: 54 NDGFIHAGNLAYMAVLAIFPFFITGAAIFSVIGEESDRAATINAVLLALPPSVANTIGPV 113
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
+V+ + L + + S+ +E +R L RAY + +++ RL+S G ++
Sbjct: 114 AREVIEARSGWLLWVGGAVGLWTVSSLIETIRDILRRAYGTEAVLAFWRYRLLSTGIIIA 173
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
A V L++ V I A +++ + P L ++L + RI + + P
Sbjct: 174 AVVLLMLSLIAQVMIGAAQEFIQAYVPQLIDMLGELQISRIIPAIGLFGSIYFLFYALTP 233
Query: 202 AA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+S+ PG + T + WV V + F Y Y L+ IM L F +++G+
Sbjct: 234 HVYRSRRYPKWPGALATTVWWVGVTVALPPILRNFFAYDLTYGALSGIMIALFFFWLVGL 293
Query: 261 FFILGAELNASMII 274
++GAELNA++ +
Sbjct: 294 GVVIGAELNAALAV 307
>gi|163794700|ref|ZP_02188670.1| putative ribonuclease protein [alpha proteobacterium BAL199]
gi|159179973|gb|EDP64498.1| putative ribonuclease protein [alpha proteobacterium BAL199]
Length = 297
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 105/267 (39%), Gaps = 8/267 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
++D +A+ ++ LS+FP I L G + V ++ + P
Sbjct: 3 KRVTGQISKDDVPVVAAGVAFFGFLSIFPAIAAFVILYGLVADPGMVMPQLEPIRELVPA 62
Query: 73 VIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + ++ QV L + + A + S+ G AL +++ AY W
Sbjct: 63 EVFDLLAMQLKQVSGTTDTTLGLGLVFTLVLAIWSSAKGATALLSAMDIAYNETHRSGWI 122
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ + + L V V+ + A+ + ++ R +
Sbjct: 123 RPRITALAFTLAGLVFAVLAIGLL----AAVPAAVALLAFRDTVSNMLLGARWLLLAGVV 178
Query: 190 FIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ L ++ + P + ++ + I PG I + W+ + F Y+ TY+ + L ++
Sbjct: 179 LVALGLLYRYGPNRRSARTVWITPGSILATVLWLAASWGFGRYVANVGTYNETFGALGAV 238
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIY 275
+ L++LY+ +GAELNA + ++
Sbjct: 239 VVLLMWLYISAYIVCIGAELNAELELH 265
>gi|307286598|ref|ZP_07566690.1| YihY family protein [Enterococcus faecalis TX0109]
gi|306502309|gb|EFM71590.1| YihY family protein [Enterococcus faecalis TX0109]
Length = 302
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I H V + + ++ LLS+FP ++ N+ +L +V+ +
Sbjct: 13 LMRFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + ++
Sbjct: 71 EAIPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R++SF +LL V +V + + + ++ F +++ + T +
Sbjct: 131 FILVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + SIL G IF+ + W++ + +F Y+ FS+ Y + S
Sbjct: 191 VLLVIMCLIYAVVPNRKLSLRSILSGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L ILGA +NA + Y
Sbjct: 251 FIILMLWLNFAATIIILGAIVNAVVDEY 278
>gi|299783492|gb|ADJ41490.1| Ribonuclease BN [Lactobacillus fermentum CECT 5716]
Length = 298
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + EHF A+ ++ LLS+FP ++ NL LG
Sbjct: 1 MKFIGTKLKRFVTVFAEHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLD--AK 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + + I I L + G+ T AL A + +S G+ A + S+N AY
Sbjct: 59 TVLPYLQSAIPSSVYQFIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ I R++SF ++++ + + + ++ L ++ N + + +
Sbjct: 119 GVAKNQNPIINRVLSFIWMIIVIMIIFALVIMYGLGEQVLEALQPILHFPINYVTLFSSL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R T LFI L ++ F+P A+ ++ ++ G + + W+ + LF++Y V F+
Sbjct: 179 RWPVTFGGLFIFLTLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLN 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y + + + +++L G+ ++GA +NA+
Sbjct: 239 SYKTIGAFILMMMWLDFSGMIVMIGAIVNAT 269
>gi|323486654|ref|ZP_08091975.1| YihY family protein [Clostridium symbiosum WAL-14163]
gi|323692200|ref|ZP_08106443.1| ribonuclease BN [Clostridium symbiosum WAL-14673]
gi|323400035|gb|EGA92412.1| YihY family protein [Clostridium symbiosum WAL-14163]
gi|323503774|gb|EGB19593.1| ribonuclease BN [Clostridium symbiosum WAL-14673]
Length = 273
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ FV+++ A+ S +LS FPFI+ + + ++ V+ +PE
Sbjct: 9 KKIYDEFVKDEITVYAAQASFFIVLSFFPFIMILLTVIQLVPTISQADLLL-VISRLFPE 67
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + + + +++ + + +S G+ + LNR + R++ I+R
Sbjct: 68 KVYPLVESIVTDLYTTAPAAILSVTTIVTIWSASRGMMGIERGLNRIINCSKRRNYVISR 127
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI+ GY ++ + ++ + V + ++ P L ++ + + R + L +
Sbjct: 128 LINSGYTVVFILVCIMSLVLMVFGTSLQRLLLRYLPILEHIAPYLLSIRALIALAILIVF 187
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ FLP K ++ LPG +F+ W+V + F+ Y F +S MY LA+I+ +
Sbjct: 188 FMGLYTFLPFEKLELRKQLPGALFSTAGWIVCSYGFSIYFNHFKRFSYMYGSLAAIVILM 247
Query: 253 VFLYMLGVFFILGAELNASM 272
++LY LGAE+N M
Sbjct: 248 LWLYFCICILFLGAEVNQHM 267
>gi|254512526|ref|ZP_05124593.1| YihY family protein [Rhodobacteraceae bacterium KLH11]
gi|221536237|gb|EEE39225.1| YihY family protein [Rhodobacteraceae bacterium KLH11]
Length = 286
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 89/266 (33%), Positives = 146/266 (54%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ A+ F ++G+ M+SH+++S ++++FPF++F LAG L +I+++F
Sbjct: 12 FLRGLWLAVRRFNNKNGFVMSSHVAMSLMMALFPFVLFTVALAGALSQGYVTDELIELIF 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
GAWP+ +A PI E+ VLA G+ T+ L A YF+SNGV A+R ++ +AY +
Sbjct: 72 GAWPQDVADPIVSELRAVLAGAGSGVITLGGLLAIYFASNGVAAVRQAMTQAYHDHDSWP 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ TRL+ V++ ++ ++ V V +P+ V + + L + R T+
Sbjct: 132 FWKTRLLCIALVIIGGAAILAIAAVEVVLPVYTRLVSEKTAVDVDHWLSVDRLRWTFTVA 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+I HL LP + ++ ILPGV T W G F+ YI F++YS YAGLA
Sbjct: 192 VPAGTVILAHLVLPTRRHRLPQILPGVALTLALWAAGGWGFSVYIAQFASYSATYAGLAG 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
M L+FLY+ ILGAE N ++I
Sbjct: 252 AMAALIFLYLCSAMLILGAEYNGALI 277
>gi|152965485|ref|YP_001361269.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151360002|gb|ABS03005.1| putative ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 317
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 115/274 (41%), Gaps = 10/274 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ A ++ +A+ ++ A L++FP + + G G + + I+ + A
Sbjct: 25 VTKRAWAEAKDDQVPLLAAGVAFKAFLAIFPALTAAFLIWGIFGDTAQITSQINGI-TAI 83
Query: 71 PEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE +T ++ V + T ++ + A + +S+GV+ L + N AY E R +
Sbjct: 84 PEEARNLVTSQVQNVANGKSTAGITAIVAVVLALWSASSGVQNLMAATNTAYDEKETRGF 143
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + L A V +++ + P+ + + G + L++ R +
Sbjct: 144 VKLKGTALLLTLGAIVFMLLAIALIGVAPVLVKALGA----SGLVSLVVNVLRWVLLLGL 199
Query: 189 LFIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFS--TYSTMYAGL 245
L + L V+ P + + G + W++ + F+ Y+ T +Y+ Y +
Sbjct: 200 LLVALAVVYRVAPDRDAPRAKWVSVGAGVATVLWLIVSAGFSIYVSTAGQSSYAKNYGSM 259
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A ++ L++L++ +LGAE+NA +
Sbjct: 260 AGVVVLLMWLWLTSYAILLGAEVNAESEKQTDKD 293
>gi|84684451|ref|ZP_01012352.1| putative ribonuclease protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84667430|gb|EAQ13899.1| putative ribonuclease protein [Rhodobacterales bacterium HTCC2654]
Length = 316
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 8/272 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F I+ F E +A+ ++ ALLS+FP I +AG + +
Sbjct: 20 FAILKRVWTRFNENRLTLIAAGVAFFALLSLFPAITATIAVAGLFFDPAEITDPLQEFAA 79
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVEM 125
P+ A I D+ V GL + L Y +S GVE L + LN AY +
Sbjct: 80 VLPDGAASIILDQATSVTGSDESGLGLAAILGLLLALYSASKGVENLMVGLNVAYAEKDE 139
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +L F + + ++ V V +P+ L + P G + ++
Sbjct: 140 RGLIRAKLTVFALTVFLVIGVIFSLGVMVVLPIVLNVL----PLGGVVETVVRIVPWLVL 195
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + P + ++ + ILPG + + W +V F+ Y F +Y +
Sbjct: 196 LIFTIGAFSILFRYGPDRRSARWVYILPGAVLACLLWGAASVGFSIYADNFGSYQESFGT 255
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
LA + L++L++ + +LGA+LNA + +
Sbjct: 256 LAGAIVLLMWLWISALVVLLGAKLNAEIEAQH 287
>gi|15604356|ref|NP_220872.1| hypothetical protein RP496 [Rickettsia prowazekii str. Madrid E]
gi|3861048|emb|CAA14948.1| unknown [Rickettsia prowazekii]
Length = 285
Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats.
Identities = 76/272 (27%), Positives = 135/272 (49%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + +Y A+ +++DG + ++S LLS+FPF+VF L FLGA + I
Sbjct: 2 IMRKILNCLYVALFRTIKDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFI 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 QIFLESLPEQATESIEKRIRELLSAPPQSLMNLAIIGSIWTASSFVECLRTILNRVYQIK 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 SPPPYIRRRLLSIIQFLIISALITFTMFLLVVIPIIFTKIPIILETIEQYKIILNFIRYS 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ LF+G ++ LP K + + PG + T + W++ L + YIV ++ + MY
Sbjct: 182 LILILLFLGASSLYYILPNVKLNFVDVFPGAVLTVVLWIISGYLLSTYIVYYNQLNLMYG 241
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
L SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 SLGSIIVTLIFFYIINMIFIYGAEFNYLMKNY 273
>gi|124007383|ref|ZP_01692090.1| ribonuclease BN [Microscilla marina ATCC 23134]
gi|123987216|gb|EAY26956.1| ribonuclease BN [Microscilla marina ATCC 23134]
Length = 370
Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats.
Identities = 66/290 (22%), Positives = 128/290 (44%), Gaps = 25/290 (8%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVID-- 64
+ II + ++ A I+ S LS+FP I+F L F ++P ++
Sbjct: 35 YRIIKTLWLNINDKPLHQQARAIAFSFTLSLFPAIIFLFTLIPFFVPYIVTYIPDIVTTG 94
Query: 65 -----------VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
++ P I K D I+ +L P L + L A Y ++NGV +
Sbjct: 95 QDIDMKQQIDALLLEFMPGEIYKYTHDTIVNILTQPRTNLLSFGVLLALYTATNGVIEMM 154
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ NR Y+ E R++ RL++ G +L + LVI+ V V A+ +V ++ +
Sbjct: 155 DTFNRNYKFAEKRNFLRKRLLAAGLAILFAFILVIVVIVLVVTEFAVEFVLEYLYEWTSW 214
Query: 174 LLI----------IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
++ + +++ A +G+ ++ PA K + G I I ++
Sbjct: 215 AMLHKDQVLGYYLLTGFKVFVLFSAFLLGIALIYNLAPARKKEWRFFSLGAISASILAML 274
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
F+ Y+ F+ Y+ +Y + +++ + +LY++ F+LG E+N SM+
Sbjct: 275 STTGFSFYLSNFANYNKLYGSIGTLIALMFWLYLIAWVFLLGFEINVSMV 324
>gi|311029165|ref|ZP_07707255.1| ribonuclease BN [Bacillus sp. m3-13]
Length = 274
Score = 178 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 2/266 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + M++ ++ LLS+FPF++F L ++ Q V+ V+
Sbjct: 3 ILRFGKQLFHRLDRNEALGMSAELAYFFLLSLFPFLIFLLTLIAYVPITQ--EDVLGVIH 60
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + ++L L + +A +F+SNG+ A+ + NRA+ V E R
Sbjct: 61 QYAPGDTMLLIESNVSRILNEQRGDLLSFGIIATIWFASNGINAIVRAFNRAFDVNENRH 120
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++I R + L +++ + V ++ + L I R + +
Sbjct: 121 FFIVRGTAILLTLAMVFVIIVALLLPVFGREIGLFIFSSYGLSEEFLTIWNTIRWGVSFV 180
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF ++L P + + +L G F + W+ +VLF++Y+ F Y+ MY L
Sbjct: 181 ILFFVFTCLYLAAPNIRLHLKDVLAGSFFATVGWMTVSVLFSYYVSNFGNYTAMYGSLGG 240
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
I+ LV+ Y+ G+ I+G E+NA ++
Sbjct: 241 IIVLLVWFYLSGLMIIIGGEINAILL 266
>gi|326800466|ref|YP_004318285.1| ribonuclease BN [Sphingobacterium sp. 21]
gi|326551230|gb|ADZ79615.1| ribonuclease BN [Sphingobacterium sp. 21]
Length = 329
Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 121/273 (44%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVIDV 65
++ + + E AS ++ S +L++FP I+F L ++ F +++
Sbjct: 34 LYTVGLFFFQEIARESLLNKASSLAYSFMLAIFPGIIFLFTLIPYIKVFIDDFQEQLLEF 93
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE K I +L ++ GL + L A F++NG+ +L + N++ V+E
Sbjct: 94 MQMILPENAYKTIESTLLDIVTNQNSGLLSFGFLMAMIFATNGIHSLMRAFNKSSLVLES 153
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGRIYA 184
RS+ RL++ ++ + L I + + +++ G +I R
Sbjct: 154 RSFVKQRLVALALAIMIIMALTIGMGIVTLASFIINHLKNTIEITGGFWTWLIGITRWII 213
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ F L ++ + P++ K PG + + F YI F+TY+ +Y
Sbjct: 214 LLGIYFFTLSILYKYGPSSSRKWSFFSPGATLATVLAALTFWGFAFYINNFNTYNKLYGS 273
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +++ +++LY+ + ++G ELNAS+ +
Sbjct: 274 IGTLIVIMIWLYLNSLILLIGFELNASIALSKQ 306
>gi|83591770|ref|YP_425522.1| ribonuclease BN [Rhodospirillum rubrum ATCC 11170]
gi|83574684|gb|ABC21235.1| Ribonuclease BN [Rhodospirillum rubrum ATCC 11170]
Length = 313
Score = 178 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 103/269 (38%), Gaps = 8/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F +I + +A+ ++ +LL+ FP +V L G Q I
Sbjct: 28 FSVIRAVSRRSDRDHVGVLAAGVAFFSLLASFPALVTLITLYGLFTGPQEAVRQIAEAGV 87
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + + + ++ L S L + + +S G+ A+ ++ AY+V +
Sbjct: 88 YLPRGVHDLLAEHLPRLAQASPGSLGLGAITSLLFSIWSASRGMGAMVDGVDIAYQVGDG 147
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + ++ G L V I + V +P + P + + R
Sbjct: 148 RGFLRKSILVVGLTLAGLVVSAIALPLIVGLPALFDRL----PLPLEIRWALALARWPLL 203
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L + + P + + PG + W++ + + Y+ S+Y Y
Sbjct: 204 FALVLGALAVLFRYAPDRENPRWRWVTPGALAAATLWILASGGLSLYVGLVSSYDQTYGT 263
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
LA ++ +++LY+ +LGAE+NA +
Sbjct: 264 LAGVVVAMMWLYLASYAVLLGAEINAELE 292
>gi|302386605|ref|YP_003822427.1| ribonuclease BN [Clostridium saccharolyticum WM1]
gi|302197233|gb|ADL04804.1| ribonuclease BN [Clostridium saccharolyticum WM1]
Length = 278
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 115/259 (44%), Gaps = 4/259 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + +++ A+ S ++++ FPF++ L + + ++ ++ P
Sbjct: 9 KQIYDKYSKDEMTVYAAQASFFSIIAAFPFMMLLLALIQLIPSI-TKANLLQLIITIIPS 67
Query: 73 --VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I I + + +++A AA + +S G+ ++ LNR Y + R++++
Sbjct: 68 TLEINSVIVTVIDDLYTNSPVAVLSVTAAAAVWSASRGMLSIERGLNRVYGHEKKRNYFV 127
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
TR+I GY ++ V ++ + V ++ + FP L + + R + L
Sbjct: 128 TRIICAGYTIVFMVICLLTLVLLVLGSSIQGFMNRHFPLLAEITQSVLTFR-TMLVFMLT 186
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ ++P K + LPG F + W+ + F+ Y F YS MY L +I+
Sbjct: 187 ACFAVLYTYVPEKKQEFYKQLPGAAFCTLGWIAFSFAFSIYFNNFGNYSVMYGSLTAIVL 246
Query: 251 CLVFLYMLGVFFILGAELN 269
++++Y LGAE+N
Sbjct: 247 LMLWIYSCICILFLGAEIN 265
>gi|110677503|ref|YP_680510.1| ribonuclease BN, putative [Roseobacter denitrificans OCh 114]
gi|109453619|gb|ABG29824.1| ribonuclease BN, putative [Roseobacter denitrificans OCh 114]
Length = 306
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 119/277 (42%), Gaps = 9/277 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ ++ A + +A+ ++ ++LS+FP + + + + V
Sbjct: 4 RISIGLLGKALFAAFGLVGRSNLALIAAGVAFYSMLSIFPALAALIAVLSLIADPEVVVV 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNR 118
+ + PE + + +I+ +++ + L +S + A + + GV A+ LN
Sbjct: 64 QLAELQELMPEDVYDILNAQIVGLVSTSSDTLGWTGLVSVIVALWSARAGVGAMMHGLNV 123
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y + R + L + + +I V P+ LA++ G +II
Sbjct: 124 VYAT-DSRGTWRHYLRAVLLTVSLVAIGIIALLALVVAPVILAFLALG----GFTSVIID 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFST 237
R + +F G+ ++ F P + I + PG +F +SW ++ F++Y+ F
Sbjct: 179 LLRWGVGIAVIFAGIGLLYRFGPNRRPAITRFVTPGSVFAAVSWAALSIAFSYYVAHFGN 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y+ +Y + +++ LV+L++ + GA LNA +
Sbjct: 239 YNEVYGSIGAVIAMLVWLWISSFLVLFGAALNAEIEA 275
>gi|157828543|ref|YP_001494785.1| hypothetical protein A1G_03800 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933259|ref|YP_001650048.1| ribonuclease BN [Rickettsia rickettsii str. Iowa]
gi|157801024|gb|ABV76277.1| hypothetical protein A1G_03800 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908346|gb|ABY72642.1| ribonuclease BN [Rickettsia rickettsii str. Iowa]
Length = 275
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 136/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKICNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQAMESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R +
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|157803755|ref|YP_001492304.1| hypothetical protein A1E_02895 [Rickettsia canadensis str. McKiel]
gi|157785018|gb|ABV73519.1| hypothetical protein A1E_02895 [Rickettsia canadensis str. McKiel]
Length = 275
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 135/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKIFHCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIKKRIQELLSAPPQSLMNLAIVGSVWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 PPYIRRRLLSIIQFLIISAVITFTMFLLVVIPIIFMKIPIILETIEKYKIILNVIRYSLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGSSSLYYILPNVKLNFVDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|150019687|ref|YP_001311941.1| ribonuclease BN [Clostridium beijerinckii NCIMB 8052]
gi|149906152|gb|ABR36985.1| putative ribonuclease BN [Clostridium beijerinckii NCIMB 8052]
Length = 284
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I I +D +A+AS ++ +LS FPF++F LAGF ++ +
Sbjct: 11 NLIIHLIVKIKRDDVFALASQLAYYLILSFFPFMLFLMTLAGFSSISS--KQILGQLNVM 68
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + ++++ GL IS L + +S+ +A+ S+N+AY E RS+
Sbjct: 69 LPRSVLELTQSTVVEIFDNQYTGLLGISILLTLWTASSAFKAIIKSINKAYNFKEERSFI 128
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+IS +L +VT+++ V + Y++ P +L+I R + +
Sbjct: 129 KLSIISMLGILALAVTIILALTALVFGNVIGDYIKSINPFYEIILIIWNIFRYTFILAIM 188
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I V+ F PA K ++ G IF+ + WV+ + +F+ YI F+ YS Y L ++
Sbjct: 189 ISIFICVYKFAPAKKLVWKEVIAGSIFSTVGWVLVSFVFSFYIDNFNNYSRFYGSLGAVF 248
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +L+++ + FILG E+N R +
Sbjct: 249 ILMTWLFLISIIFILGVEINFVTSELRGRNR 279
>gi|67459119|ref|YP_246743.1| ribonuclease BN, putative [Rickettsia felis URRWXCal2]
gi|67004652|gb|AAY61578.1| Ribonuclease BN, putative [Rickettsia felis URRWXCal2]
Length = 275
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 80/270 (29%), Positives = 136/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKIFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYSLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I WV+ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWVISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|83941959|ref|ZP_00954421.1| conserved hypothetical membrane protein [Sulfitobacter sp. EE-36]
gi|83847779|gb|EAP85654.1| conserved hypothetical membrane protein [Sulfitobacter sp. EE-36]
Length = 308
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 120/275 (43%), Gaps = 9/275 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ +D + A+ E++ +A+ ++ A+LS+FP + + + V +
Sbjct: 8 TVKLYWDALKAALVDISEKNVSLIAAGVAFYAMLSLFPALAALVTILSLISDPVVVIAQL 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTIS---ALAAAYFSSNGVEALRISLNRAY 120
+ + G P+ + + D+++ ++ L L A + + GV A+ I LN Y
Sbjct: 68 EDMRGLLPDDVYDILNDQVVSLVTTSTGKLGWAGAASVLVAMWSARAGVGAMMIGLNSVY 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R+ L + + +I V P+ L+++ G + I
Sbjct: 128 SER-NRNAARHYLRALMLTFTLVMVGLIALITVVIAPIVLSFIP--LGVFGYFVAEI--I 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
R +L L G+ ++ F P ++ +I + G +F SW V ++ F++Y+ F Y+
Sbjct: 183 RWSIAILVLLAGVGVLYRFGPNRRAARIGWLTWGAVFAVFSWAVVSIGFSYYVANFGNYN 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y + +++ LV+L++ ++GA NA + +
Sbjct: 243 QVYGSIGAVIAMLVWLWISSFLVLMGASWNAQVEL 277
>gi|260433769|ref|ZP_05787740.1| ribonuclease BN [Silicibacter lacuscaerulensis ITI-1157]
gi|260417597|gb|EEX10856.1| ribonuclease BN [Silicibacter lacuscaerulensis ITI-1157]
Length = 288
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 86/270 (31%), Positives = 145/270 (53%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ A+ F +++G+ M+SH+++S +L++FPF +F +LAG L +I
Sbjct: 8 VLGRFGRALWLAVRRFDDKNGFVMSSHVAMSLMLALFPFALFTVSLAGLLSQDYVTDEMI 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++FG WP +A+PI E+ VL G T+ A+ A YF+SNGV A+R ++N+AY
Sbjct: 68 GLIFGVWPNEVAEPIVAELRAVLNGAGSGTITLGAVLAVYFASNGVVAVRAAINQAYHDT 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ ++ TRL G V+L ++I++ V + +P+ + + L + R
Sbjct: 128 DSWPFWKTRLFCLGLVILGGAAILIVAAVELLLPIYSRLMSEKTSVNVADWLSVERLRWT 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + ++ HL LP + + ILPGV+ T W+ G + F+ YI F+ YS YA
Sbjct: 188 FAVAVPALTVLLAHLVLPVGRHSLRQILPGVLLTLGLWLAGGLAFSLYIGQFARYSATYA 247
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
GLA M L+FLY+ I GAE N +++
Sbjct: 248 GLAGAMAALIFLYLSAAIMIFGAEFNGALM 277
>gi|163736480|ref|ZP_02143899.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
gi|163743276|ref|ZP_02150657.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
gi|161383464|gb|EDQ07852.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
gi|161390350|gb|EDQ14700.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
Length = 287
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 87/266 (32%), Positives = 150/266 (56%), Gaps = 4/266 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANL----AGFLGAHQFVPTVIDVVF 67
+Y A + F +++GW ++SHI++S +L++FPFI+F L AG + ++++VF
Sbjct: 14 LYLAAKRFNDKNGWVLSSHIAMSLMLALFPFILFTVALTGAVAGAFSDGIDLKNLVELVF 73
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G+WP+ ++ PI E+ VLA + G+ T+ + A YF+SNGV+A+R+++ +AY + R
Sbjct: 74 GSWPDSVSDPIVREVYSVLATSSTGVVTLGGVIAIYFASNGVDAVRLAMVQAYHERDHRP 133
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ TR + G V+L ++ + + +PL ++ FFP + +
Sbjct: 134 FWKTRGLCIGLVILGGAGIMAAAVFELILPLYARHLASFFPQVPLARNWESGLNGILVAV 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
I + H+ LPA + + +LPGV+ T + W + F YI +F++YS YAGLA
Sbjct: 194 IPLIAVCAFHMLLPAKRHRFTQVLPGVLLTVVLWWAAGLAFAIYISSFASYSATYAGLAG 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
M L+FLY+ ILGAELN ++
Sbjct: 254 AMAALIFLYLNSAILILGAELNGVLL 279
>gi|51473680|ref|YP_067437.1| hypothetical protein RT0483 [Rickettsia typhi str. Wilmington]
gi|51459992|gb|AAU03955.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 281
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 76/272 (27%), Positives = 135/272 (49%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + +Y A+ +++DG + ++S LLS+FPF+VF L FLGA + I
Sbjct: 2 IMRKILNCLYVALFRTIKDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFI 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 QIFLESLPEQATESIEKRIRELLSAPPQSLMNLAIIGSIWTASSFVECLRTILNRVYQIK 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 SPPPYIRRRLLSIIQFLIISALITFTMFLLVVIPIIFTKIPIILETIEQYKIILNFIRYS 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ LF+G ++ LP K + + PG + T + W++ L + YIV ++ + MY
Sbjct: 182 LILILLFLGASSLYYILPNVKLNFVDVFPGAVLTVVLWIISGYLLSTYIVYYNQLNLMYG 241
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
L SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 SLGSIIVTLIFFYIINMIFIYGAEFNYLMQNY 273
>gi|163735479|ref|ZP_02142912.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
gi|161391292|gb|EDQ15628.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
Length = 302
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 116/269 (43%), Gaps = 9/269 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ A+ + +A+ ++ ++LS+FP + + + + V + +
Sbjct: 12 KALFAAVGQVGRSNLALIAAGVAFYSMLSIFPALAALIAVLSLIADPEVVIVQLSELQEL 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + + +I+ +++ + L +S L A + + GV A+ LN Y + R
Sbjct: 72 MPDDVYDILNAQIVGLVSTSSDTLGWTGIVSVLVALWSARAGVGAMMHGLNVVYAT-DSR 130
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L + + ++ V P+ LA++ G +II R +
Sbjct: 131 GTWRHYLRAVLLTISLVAVGIVALLALVIAPVILAFLALG----GFTSVIIDLLRWGLGI 186
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+F G+ ++ F P + + PG +F +SW ++ F++Y+ F Y+ +Y +
Sbjct: 187 AVIFAGIGMLYRFGPNRRPENTRFLTPGSVFAAVSWAALSIAFSYYVTHFGNYNEVYGSI 246
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
+++ LV+L++ + GA LNA +
Sbjct: 247 GAVIAMLVWLWISSFLVLFGAALNAEIEA 275
>gi|326792696|ref|YP_004310517.1| ribonuclease BN [Clostridium lentocellum DSM 5427]
gi|326543460|gb|ADZ85319.1| ribonuclease BN [Clostridium lentocellum DSM 5427]
Length = 289
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 128/267 (47%), Gaps = 3/267 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + I + + A +++++ +L+ FPFI+F +L + V ++ +
Sbjct: 10 IVQFLRKMIRRYSAHNVSATSAYMAYYWVLAFFPFIIFLISLLSYTKIP--VSVLLQYLS 67
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + I + I Q + + L ++ L + + V AL ++ AY ++
Sbjct: 68 EMVPDSLVPVIENTIKQFILYRSTALLSVGGLVTLWSAGTAVNALTRGIHIAYNSKYIKP 127
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATM 186
++ RLI+ Y +L ++ L+++ V Y+ + + IWN R+
Sbjct: 128 FWQARLIALVYTVLLALLLILLMVGLVFGNRLGDYLFGVLDMQKGIFMPIWNMARLTMPF 187
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+AL + L ++ F+P K ++ PGV+FT + W + +++F+ Y+ +S Y+ +Y +
Sbjct: 188 IALIVVLYIIYKFIPRKYLKSTNVWPGVMFTSVGWYLFSLIFSIYVDNYSKYNQLYGSIG 247
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
S+ L++LY +LGAE+NA +
Sbjct: 248 SVFILLIWLYGSCTLLLLGAEINAQLQ 274
>gi|15892593|ref|NP_360307.1| hypothetical protein RC0670 [Rickettsia conorii str. Malish 7]
gi|238650246|ref|YP_002916097.1| ribonuclease BN, putative [Rickettsia peacockii str. Rustic]
gi|15619759|gb|AAL03208.1| unknown [Rickettsia conorii str. Malish 7]
gi|238624344|gb|ACR47050.1| ribonuclease BN, putative [Rickettsia peacockii str. Rustic]
Length = 275
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 137/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKIFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R +
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|154505816|ref|ZP_02042554.1| hypothetical protein RUMGNA_03356 [Ruminococcus gnavus ATCC 29149]
gi|153793834|gb|EDN76254.1| hypothetical protein RUMGNA_03356 [Ruminococcus gnavus ATCC 29149]
Length = 289
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 6/249 (2%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+LS+ P I+ F VID V +P + I + QV + +
Sbjct: 36 VLSMIPIILLLLTAVQF--TPATYANVIDAVEQVFPTSVQGFIRSIVTQVYFSQSAKIIP 93
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
I+ L A + + GV ++ LN Y E R++ RL + Y ++ + +V+ + V
Sbjct: 94 ITILVALWSAGRGVLSVTAGLNCIYGNTETRNYVYLRLRASLYTVIFILAIVLSLVLSVF 153
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA----KSKIMSIL 211
A + K P L+ I R T+ L + V+ +LP K+ + L
Sbjct: 154 GNSISAMIYKHAPFWSTLMQYIIKIRTVMTLAVLTVFWDLVYKYLPNRRATQKTTLRKQL 213
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
PG +FT W++ + +F+ Y+ F +S MY + +I+ +++LY+ +LG E+NA
Sbjct: 214 PGAVFTACGWLLISFIFSIYLDIFEGFSDMYGSMTTIVLIMLWLYLCMYVILLGGEVNAL 273
Query: 272 MIIYYWRKK 280
+ Y K
Sbjct: 274 LEKYLDNHK 282
>gi|296446755|ref|ZP_06888694.1| ribonuclease BN [Methylosinus trichosporium OB3b]
gi|296255758|gb|EFH02846.1| ribonuclease BN [Methylosinus trichosporium OB3b]
Length = 273
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 102/261 (39%), Positives = 142/261 (54%), Gaps = 1/261 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I DA HF E DG+A+ASHI+L+ L+S+FPF++ LA G+ + ++
Sbjct: 2 RIPLDAFLHFNEGDGFAIASHIALTTLMSLFPFLIVVTALAATFGSTRLADEAGRLLLDV 61
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WP +A PI EI +V P T AL + YF+S+G+E+LRI LNRAY E R W+
Sbjct: 62 WPSQVAAPIAGEIRRVATTPQGSALTAGALFSVYFASSGIESLRIGLNRAYEAQETRPWW 121
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ RL S YVL ++V L+I+S + V P+ ++F L + + R L L
Sbjct: 122 LLRLESIFYVLGSAVALLILSVLVVLWPIVTDVAARWFDWLPSFWTFVTLARFAIATLVL 181
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLASI 248
L +H +LPA + +I LPGV+ T W++ F Y+ F+ Y YAGLAS
Sbjct: 182 AAALFAIHNWLPAGRRRISETLPGVVVTLALWLIAGSAFGAYLSAFAERYVLTYAGLASA 241
Query: 249 MTCLVFLYMLGVFFILGAELN 269
M LVFLY V FI G ELN
Sbjct: 242 MIALVFLYFTAVIFIYGGELN 262
>gi|229586760|ref|YP_002845261.1| Putative ribonuclease BN [Rickettsia africae ESF-5]
gi|228021810|gb|ACP53518.1| Putative ribonuclease BN [Rickettsia africae ESF-5]
Length = 275
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 137/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKIFNCLYVALFRTIEDDGIEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R +
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|163745189|ref|ZP_02152549.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
gi|161382007|gb|EDQ06416.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
Length = 309
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 124/279 (44%), Gaps = 12/279 (4%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I +D +++ ++ +++ ++ A+LS+FP + L G + V ++ V
Sbjct: 12 IYWDAFKASLKQAASDNLALISAGVAFFAMLSLFPALAALIALLGLISDPVVVIAQLEDV 71
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVV 123
G P+ + I ++ ++ A L +S L A + + GV A+ I LN Y
Sbjct: 72 RGLLPDDVYDIINTQVTGLVTARADTLGWAGIVSLLVALWSARAGVGAMVIGLNSVYNER 131
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R+ L + + ++ V P+ LA++ GN + + R
Sbjct: 132 -NRNAAKHYLHALLLTVSLVAVGIVALLAVVVAPIILAFIP--LGPFGNAVADL--LRWT 186
Query: 184 ATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ LF G+ ++ F P ++ ++ + G I +SW V ++ F++Y+ F Y+ +Y
Sbjct: 187 VATVVLFAGVGVLYRFGPNRRAARLPWLSSGAILAVLSWAVISIGFSYYVANFGNYNQVY 246
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ +++ LV+L++ + GA LNA + R KP
Sbjct: 247 GSIGAVIAMLVWLWISSFLILFGAALNAQVE---RRTKP 282
>gi|83949735|ref|ZP_00958468.1| Ribonuclease BN [Roseovarius nubinhibens ISM]
gi|83837634|gb|EAP76930.1| Ribonuclease BN [Roseovarius nubinhibens ISM]
Length = 315
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 114/267 (42%), Gaps = 8/267 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + +++ ++ ALLS+FP + + GF G + + DV P
Sbjct: 1 MGRVFGGIDRLNIGLISAGVAFYALLSLFPAVTAMVAIWGFAGDPSKLLSQFDVARQFMP 60
Query: 72 EVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
E + ++I ++ L IS + + + N AL LN YR ++
Sbjct: 61 EEAYLLVQEQITALIVADNTTLQWTTVISLTLSIWSAKNATAALIRGLNSIYREDHRKNP 120
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ ++ ++ + +A+P+ALA++ + + + + M
Sbjct: 121 LKRYGVAVALTIVMIAAALVAFALVIALPVALAFLNLGIK----VEMFVSAAKWAILMGV 176
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ + P + + + + PG +F +W G++ F+ Y+ F +++ +Y L +
Sbjct: 177 VLLCFGLLYRYGPNRRGATVSWLSPGALFALATWAAGSIAFSTYLRNFGSFNEVYGSLGA 236
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
++ L + Y+ ++GA +NA + +
Sbjct: 237 LVALLFWFYISAYVVLIGALINAELEL 263
>gi|157825789|ref|YP_001493509.1| ribonuclease BN, putative [Rickettsia akari str. Hartford]
gi|157799747|gb|ABV75001.1| Ribonuclease BN, putative [Rickettsia akari str. Hartford]
Length = 275
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 79/271 (29%), Positives = 137/271 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E+DG + ++S L+S+FPF+VF L FLGA + I +
Sbjct: 2 RKIFNCLYVALFKTIEDDGVEHSGYMSFMILVSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
++ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 PTYVRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFTRYSLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I WV+ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASALYYILPNVKLNFIDVFPGALLTVILWVISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNYK 272
>gi|319949392|ref|ZP_08023458.1| ribonuclease BN [Dietzia cinnamea P4]
gi|319436939|gb|EFV91993.1| ribonuclease BN [Dietzia cinnamea P4]
Length = 341
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 48/259 (18%), Positives = 105/259 (40%), Gaps = 5/259 (1%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDE 81
G +A ++ +LS+FP ++ +L G G + V V+D++ P + P+
Sbjct: 1 RGPDLAGSLTYYGVLSLFPAVLVVVSLLGVFGQGSRTVDAVMDMLSDVAPPEVLDPVRGP 60
Query: 82 ILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ ++ PA G + A + +S V AL ++N + + E R +
Sbjct: 61 VEALVTTPAAGTALIVGTAVALWSASRYVRALGRAMNAMFGIEEGRPPWRLLPAGLALTA 120
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLIFVHLF 199
L V + + V + LG+ L +W + A ++A+ + L ++ F
Sbjct: 121 LLIVLVAVGGVALAFSGPVAETVGDWI-GLGDTALAVWGVAKWPAAVIAVILALAILYRF 179
Query: 200 LPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
P + + G V + ++ F ++ +Y LA ++ L++L+++
Sbjct: 180 APNISGRRFSWVSLGAAAALAIMGVATAGLSFFVSNFGNFNRVYGSLAGVIVFLLWLWLV 239
Query: 259 GVFFILGAELNASMIIYYW 277
+ + G L+A ++
Sbjct: 240 NMAVVFGVRLDAEVLRVRQ 258
>gi|83953008|ref|ZP_00961730.1| hypothetical protein NAS141_11906 [Sulfitobacter sp. NAS-14.1]
gi|83841976|gb|EAP81144.1| hypothetical protein NAS141_11906 [Sulfitobacter sp. NAS-14.1]
Length = 303
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 118/275 (42%), Gaps = 9/275 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ +D + A+ E++ +A+ ++ A+LS+FP + + + V +
Sbjct: 3 TVKLYWDALKAALVDISEKNVSLIAAGVAFYAMLSLFPALAALVTILSLISDPVVVIAQL 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTIS---ALAAAYFSSNGVEALRISLNRAY 120
+ + G P+ + + D+++ ++ L L A + + GV A+ I LN Y
Sbjct: 63 EDMRGLLPDDVYDILNDQVVSLVTTSTGKLGWAGAASVLVAMWSARAGVGAMMIGLNSVY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R+ L + + +I V P+ L+++ +
Sbjct: 123 SER-NRNAARHYLRALMLTFTLVMVGLIALITVVIAPIVLSFIPLGVFG----YFVAEII 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
R +L L G+ ++ F P ++ +I + G +F SW V ++ F++Y+ F Y+
Sbjct: 178 RWSIAILVLLAGVGVLYRFGPNRRAARIGWLTWGAVFAVFSWAVVSIGFSYYVANFGNYN 237
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y + +++ LV+L++ ++GA NA + +
Sbjct: 238 QVYGSIGAVIAMLVWLWISSFLVLMGASWNAQVEL 272
>gi|157964558|ref|YP_001499382.1| putative ribonuclease BN [Rickettsia massiliae MTU5]
gi|157844334|gb|ABV84835.1| Putative ribonuclease BN [Rickettsia massiliae MTU5]
Length = 288
Score = 175 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 78/275 (28%), Positives = 137/275 (49%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ +F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA +
Sbjct: 10 LAFIMRKIFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQ 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + + PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y
Sbjct: 70 NFIQIFLESLPEQATESIAKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVY 129
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ + RL+S L+ S + F+ V IP+ + + +I+
Sbjct: 130 QIKSPPPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFI 189
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ LF+G ++ LP K + + PG + T I W++ L + YI+ ++ +
Sbjct: 190 RYSLILILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIIYYNQLNL 249
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
MY L SI+ L+F Y++ + FI GAE N M Y
Sbjct: 250 MYGSLGSIIVTLIFFYIINMIFIYGAEFNYLMKNY 284
>gi|317127299|ref|YP_004093581.1| ribonuclease BN [Bacillus cellulosilyticus DSM 2522]
gi|315472247|gb|ADU28850.1| ribonuclease BN [Bacillus cellulosilyticus DSM 2522]
Length = 261
Score = 175 bits (445), Expect = 6e-42, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 7/263 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ F E +A+ S LLS+FPF++F L FL + I+V+
Sbjct: 2 ELAISLYLRFKEHRLIELAAQCSYYLLLSIFPFLIFILTLFSFLPL--TLEFDINVIQDV 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I + I + ++ + GL + S + + +S + + LNRAY V E R
Sbjct: 60 VPAEIFQFIEGQWTRITSQHNTGLLSFSIIFTIWTASLALNTILRLLNRAYHVTEERKML 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RLIS + +++ + V + F + R + L L
Sbjct: 120 KGRLISIFLTIGMFAVVLVALGLQVIGATLKDVLPFDFN-----IFKFNLLRWGISSLVL 174
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI + ++L P + K+ + G IF + W++ +FT Y+ F+ Y+ Y + +++
Sbjct: 175 FIVFMLLYLVGPNIRLKLRDVYIGAIFATLGWLLTTSMFTFYLDNFANYTATYGTIGAVI 234
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
+V+ ++ V +LG E+NA +
Sbjct: 235 ALMVWFHLSSVIILLGGEINAEL 257
>gi|325694920|gb|EGD36825.1| ribonuclease BN [Streptococcus sanguinis SK150]
Length = 308
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + V + +
Sbjct: 17 QFLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRVMSLFVSLGLQILFAFALFLTMFGHMSLDFLRTYWKLDSQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ ++ FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMLYYFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + M+ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIMIAKILIVGAVLNASIQ 281
>gi|190894365|ref|YP_001984658.1| putative ribonuclease [Rhizobium etli CIAT 652]
gi|190700026|gb|ACE94108.1| putative ribonuclease protein [Rhizobium etli CIAT 652]
Length = 358
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 124/276 (44%), Gaps = 8/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + +++ +A+ ++ LL++FP + +L G + + + +
Sbjct: 62 LRDVFWRVYHEVLDDRITLIAAGVTFYLLLALFPALAALVSLYGLVADPVTISEHLRELA 121
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
G P I D+I ++ L F + A + + +G A+ ++N AY E
Sbjct: 122 GLLPPGAFDLIADQIKALVEKRESTLGITFFVGLAIALWSTHSGTLAIFDAMNVAYEENE 181
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L + L A V V+M + +P+ L+Y+ + L + R
Sbjct: 182 KRGFLRLNLTGLCFTLCAMVFAVVMVVLVGVMPVMLSYL--WLDQFKEHLAL--LLRWPL 237
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + + V+ F P+ + ++I + G T ++W V ++ F+ Y+ F+ Y+ Y
Sbjct: 238 LLFIVAVAVTLVYRFGPSREPARIRWMTWGAALTTLAWAVMSIGFSFYLDHFANYNATYG 297
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ L+++++ V I+GAELNA + R
Sbjct: 298 TLGALIGFLIWIWLSVVILIVGAELNAELEHQTARD 333
>gi|168185392|ref|ZP_02620027.1| ribonuclease BN [Clostridium botulinum C str. Eklund]
gi|169296339|gb|EDS78472.1| ribonuclease BN [Clostridium botulinum C str. Eklund]
Length = 271
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
II+ + +++ +A+AS ++ S LLS FPF++F +A F +I +
Sbjct: 8 KIIFKLLYKLKKDEIFALASQLAYSLLLSFFPFLIFLFTVASFSSLQS--EGIIMTLKNI 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + + + L + S + + +SNG +A+ +LN+AY E RS+
Sbjct: 66 IPDSAYNLVYSILNETFEASNVNLLSFSFIITIWIASNGFKAVIRALNKAYGEEEERSFI 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + ++ + ++ F+ V + + +L I R + ++ +
Sbjct: 126 KIQFMGIISTVILTFLIIFSLFILVLGNIIGLKIITMLSLPISLYFIWNVLRYFVMLIFM 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I V+ P K +LPG IF I W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 186 IIIFAIVYKITPCRKLTFKDVLPGAIFATIGWIIVSLGFSFYVDNFANYSRLYGSIGAVI 245
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
LV+L++ + ++G E+NA ++
Sbjct: 246 VLLVWLFLSSIIILIGGEINAILL 269
>gi|284036533|ref|YP_003386463.1| ribonuclease BN [Spirosoma linguale DSM 74]
gi|283815826|gb|ADB37664.1| ribonuclease BN [Spirosoma linguale DSM 74]
Length = 318
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 126/275 (45%), Gaps = 2/275 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVF 67
+ + ++ + + A+ +S S +L+VFP ++F L F+ ++
Sbjct: 31 YSFLKKMLDQITDNNTSERAASVSYSLILAVFPTVIFFFTLIPFITFIPNLEEQIMGFFR 90
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I +++ P G+ + L A Y +++G+ AL + N +Y E R
Sbjct: 91 EVLPGNTFSSVDTTIRDIVSRPRSGVLSFGFLLALYSATSGLVALMQAFNSSYHSDERRG 150
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ RL++ G + L++ V + + Y+ F L + + Y +
Sbjct: 151 FFKVRLVAIGLTFTLAFALILAIVVLIIGGIISDYLLHFGLLNNALFINLLAITRYLVVF 210
Query: 188 ALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A+F+G + ++ + P + K + I PG + + V+ + F++Y+ F +Y+ +Y +
Sbjct: 211 AVFVGTVSVIYRYGPDVRMKWVFITPGAVTASLLIVLTTLGFSYYVSNFGSYNKVYGSIG 270
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+++ ++++ ++ + ILG E+N ++ + P
Sbjct: 271 TLIALMIWINLISLLLILGFEMNVALYNLEGDRSP 305
>gi|34580425|ref|ZP_00141905.1| hypothetical protein [Rickettsia sibirica 246]
gi|28261810|gb|EAA25314.1| unknown [Rickettsia sibirica 246]
Length = 275
Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 137/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKIFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R +
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|325696058|gb|EGD37949.1| ribonuclease BN [Streptococcus sanguinis SK160]
Length = 313
Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 122/277 (44%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+++F + + + + E D + ++ L+SVFP ++ N+ + V
Sbjct: 12 KKFFAKIRRNQFLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--V 69
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + PE + + + +VL P+ GL + S L+A + S + L+I+ N+A
Sbjct: 70 ADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKA 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y V + R R++S L + + F+ + ++L ++R ++ L + +
Sbjct: 130 YGVAKSRGLISHRVMSLFVSLGLQILFALTLFLTMFGHMSLDFLRTYWKLDNQLYQHLQH 189
Query: 180 GRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
LF L+ ++ FLP K K +LPG F ++ + +F+ Y+ + +
Sbjct: 190 FTEPLIYALLFAVLVMLYYFLPNVKIKKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNH 249
Query: 239 STMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+SI+ + + M+ I+GA LNAS+
Sbjct: 250 LVDVRFFSSIIMVVMMFWFIMIAKILIVGAVLNASIQ 286
>gi|259419076|ref|ZP_05742993.1| YihY family protein [Silicibacter sp. TrichCH4B]
gi|259345298|gb|EEW57152.1| YihY family protein [Silicibacter sp. TrichCH4B]
Length = 287
Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats.
Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 4/268 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG----FLGAHQFVPTVIDV 65
I+ A+ F ++ W ++SHI++S ++++FPF++F L+G V V+D+
Sbjct: 12 RILRRALGRFGRKNAWVLSSHIAMSMMMALFPFVLFTVALSGAIASLFSHRVVVDDVVDL 71
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
VFG+WP+ +A+PIT E+ VL GL T+ + A YF+SNGV+A+RI++ RAY E
Sbjct: 72 VFGSWPQSVAEPITREVYAVLETSGTGLMTLGGVLALYFASNGVDAIRIAMLRAYGQEET 131
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ RLIS G V++ L++ + + +PL +V +FFP L L
Sbjct: 132 RPFWKHRLISLGLVIMGGAGLLLTAVFELFLPLGARFVARFFPDLDFLRGWEHGANGLVV 191
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + HL L + + ILPG + T + W +F Y+ +F++YS YAGL
Sbjct: 192 AVIPVAAVFLYHLVLLPRRETVRHILPGAVVTLLLWWAAGTVFALYVSSFASYSATYAGL 251
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
A M L+FLY+ ILGAE+N +
Sbjct: 252 AGAMAALIFLYLNAAILILGAEINGVLQ 279
>gi|317495128|ref|ZP_07953498.1| ribonuclease BN family protein [Gemella moribillum M424]
gi|316914550|gb|EFV36026.1| ribonuclease BN family protein [Gemella moribillum M424]
Length = 301
Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + + ++ +++++S +LSVFP ++ L + Q ++ +
Sbjct: 21 IKKFVKEMYYRIMYDEISLLSANLSYYFILSVFPMLIVALALTPYFKIDQ--QFLLAKIQ 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + + I +VL + TI + + +SNG+ + I+ N A+RV + R
Sbjct: 79 TFAPGALGDYLFNMISEVLNSKNNNTIITIGVVFTLWSASNGIYGIIIAFNNAFRVRDGR 138
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W +T++IS + +L + + ++ + V + F + +
Sbjct: 139 IWIVTKIISIIFTVLFLIGMFLVLALVVFGKQLTYLLFHKFNLDEGFYTMWSYLSYSFPI 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L FI +F+++ P K K +SILPG +F+ ISW + + LF +YI FS+Y Y +
Sbjct: 199 LFTFIVFVFLYILGPNLKLKSISILPGAVFSTISWTLVSRLFGYYIDHFSSYIKTYGTIG 258
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++M +++LY+ G I+GAE+NA Y +
Sbjct: 259 ALMAFIIWLYITGYILIIGAEINAIFHNYKIEHR 292
>gi|327470720|gb|EGF16176.1| ribonuclease BN [Streptococcus sanguinis SK330]
Length = 308
Score = 175 bits (444), Expect = 7e-42, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + V + +
Sbjct: 17 QFLREFFRFYKESDSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VTDFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKIMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKRRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRIMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKIDSQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ ++ FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMLYYFLPNVKINKKRFVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + ++ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIIIAKILIVGAVLNASIQ 281
>gi|330466829|ref|YP_004404572.1| ribonuclease bn [Verrucosispora maris AB-18-032]
gi|328809800|gb|AEB43972.1| ribonuclease bn [Verrucosispora maris AB-18-032]
Length = 326
Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 110/272 (40%), Gaps = 6/272 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVF 67
++ + +F+ ++ A+ ++ +L++FP V L G + + V TV+D+
Sbjct: 31 RGVLIRSGRNFLRDNCTDWAAALTYYGVLALFPSTVVVVALVGLVSDGERTVDTVLDLAR 90
Query: 68 GAWPEVIA--KPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
G + + + ++ + L + A + +SN + + + N Y V+
Sbjct: 91 GVGAGDVVGNESFVGVVRALVDQNSSARVLLSFGLFGALWSASNFIASFTRASNAIYGVI 150
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + R + G L+ V + ++ + V A G +
Sbjct: 151 EGRPMWRLRPMQIGLAALSLVLIATVAAGLIVSGPVADAVGDLIGAGGAARTAWAVAKWP 210
Query: 184 ATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A + + L + P + + + PG + ++W++ + F Y+ F +Y Y
Sbjct: 211 ALAMIAMLLLSLLFWVAPNVRQPRFRWLTPGGVVALLAWMISSFGFGLYVANFGSYDATY 270
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
L +++ LV+L++ +LG ++NA +
Sbjct: 271 GSLGAVIAFLVWLFLSNSALMLGVQINAELQR 302
>gi|269925355|ref|YP_003321978.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
gi|269789015|gb|ACZ41156.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
Length = 319
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 56/282 (19%), Positives = 115/282 (40%), Gaps = 15/282 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTV 62
D++ + E+ A+ ++ + ++FPF+ F ++ G Q +
Sbjct: 30 DLLKQVWKEASEDHLGDFAASLTYHGIFAIFPFLTFLISMLGIFDKVLGVFDTSQLIKDF 89
Query: 63 ID--VVFGAWPEVIAKPITDEILQVLAVPAKGLFT----ISALAAAYFSSNGVEALRISL 116
+ V A P + + +I +++ G FT +S L A + S ++ SL
Sbjct: 90 LSRPQVRQAIPVEVIDFVQQQIDRLIGNIRPGTFTTGAIVSVLLALWGVSGAFRSIMESL 149
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N Y + + R + LIS ++A + L+ + V P ++ + LG L
Sbjct: 150 NVVYEIKDSRPIWKKYLISIMLSVIAVLLLLSAGILAVFGPKIADWLAR-TTGLGTLFAW 208
Query: 177 IWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
W +L + ++ + P K + + PG I + W+V ++F+ Y+ F
Sbjct: 209 SWKIAQWPLLILIALLAFALIYHYGPDIKQPLRLVTPGSILALLGWLVFTLIFSLYVNNF 268
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y+ Y LA + ++++Y ++G E+N + Y
Sbjct: 269 GNYNKTYGTLAGAILLMLYMYYSSYILLMGGEVNHVVETYSK 310
>gi|256394381|ref|YP_003115945.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256360607|gb|ACU74104.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 331
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 113/273 (41%), Gaps = 7/273 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ + ++ A+ ++ L+VFP ++ ++ G LG V TV+D V
Sbjct: 53 LSVLKRSAVAAHTDELVDRAAALTYYGFLAVFPTLLLAISVLGLLG-TSTVNTVLDNVQK 111
Query: 69 AWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + I QV A G L L A + +S V A + N Y V E R
Sbjct: 112 LAPGSVHDVLRTAITQVRASGGTGGTLAIAGVLGALWSASGYVGAFIRASNVVYGVRENR 171
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ T + G +L VT ++ + V + LG+ IW+ + +
Sbjct: 172 PMWKTTPLRIGLTMLMMVTSMVSIVIVVFTGPLADRTSQIL-GLGHTAFTIWSIVKWPVL 230
Query: 187 LALFIGLI-FVHLFLPAAK--SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L +I + P + I PG + + W+V + F YI F++Y+ Y
Sbjct: 231 VFLVAAMIVLLFWAAPKTHGVRRFRWISPGSLLAVVLWLVLSTGFATYIANFASYNKTYG 290
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+A ++ L++L++ + +LG E + + +
Sbjct: 291 TVAGVIVFLLWLWLSNLAILLGLEFDVELTAEH 323
>gi|118444295|ref|YP_877597.1| ribonuclease BN [Clostridium novyi NT]
gi|118134751|gb|ABK61795.1| ribonuclease BN, putative [Clostridium novyi NT]
Length = 271
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 127/264 (48%), Gaps = 2/264 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I+ + +++ +A+AS ++ S LLS FPF++F +A F +I +
Sbjct: 8 NLIFKLLYKLKKDEIFALASQLAYSLLLSFFPFLIFLFTVASFSSLKS--EGIIITLKSV 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + L + S + + +SNG +A+ +LN+AY E RS++
Sbjct: 66 IPESAYTLVHSILNETFEASNVNLLSFSFIITIWIASNGFKAVIRALNKAYGQEEERSFF 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + ++ + ++ F+ V + + NL I R + ++ +
Sbjct: 126 KIQFMGIISTIILTFLIIFSLFILVLGNIIGLKIITMLSLSINLYFIWNVLRYFVMLIFM 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ V+ P K K ++PG IF I W+V ++ F+ Y+ F+ YS +Y + +++
Sbjct: 186 IVIFAIVYKITPCRKLKFKDVIPGAIFATIGWIVVSLGFSFYVDNFANYSRLYGSIGAVI 245
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
LV+L++ + ++G E+NA ++
Sbjct: 246 VILVWLFLSSIIILIGGEINAILL 269
>gi|312869802|ref|ZP_07729944.1| YihY family protein [Lactobacillus oris PB013-T2-3]
gi|311094648|gb|EFQ52950.1| YihY family protein [Lactobacillus oris PB013-T2-3]
Length = 302
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 2/277 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + + + HF + A+ ++ LLS+FP ++ NL +G
Sbjct: 1 MKNEPGKLKNFVLLLMRHFTMAQISSSAAMLAYYTLLSIFPAVLVIGNLLPMVGLD--AD 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + I I L + GL T AL A + +S G+ A + S+N Y
Sbjct: 59 TVLSYLQTAVPSSVYVFIKPLIYDFLRQGSGGLLTTGALIALWSTSQGIAAFQRSVNLTY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V ++ I R++SF ++++ + + + ++ L ++ + + +
Sbjct: 119 DVARNQNPVINRVVSFIWMIVVIILIYAIVLLYGFGEQVLNSIQPLLQFNRRYISLFNSL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LFI L ++ F+P AK ++ G + + W+ + LF++Y V F
Sbjct: 179 RWPVALAVLFIALTLLYYFVPNAKVRLRYAATGALLAALLWMGLSRLFSYYTVFFRHSVV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L + G +LGA LNA++ +
Sbjct: 239 SYKTIGAFIAMMIWLDLSGYVIMLGAVLNATLQEAHE 275
>gi|17229562|ref|NP_486110.1| hypothetical protein all2070 [Nostoc sp. PCC 7120]
gi|17131161|dbj|BAB73769.1| all2070 [Nostoc sp. PCC 7120]
Length = 301
Score = 173 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 57/276 (20%), Positives = 119/276 (43%), Gaps = 5/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFV 59
R + + + + E + S I+ +A+LS+FP I+ GF
Sbjct: 8 RFFRHLNWHTLKKTFTRTTERRLLGLGSEIAFNAMLSLFPAILAVLTAIGFFADSLQDTF 67
Query: 60 PTVIDVVFGAWPEVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + PE I + ++ GLF++S + A + +S V + ++
Sbjct: 68 RQLAAQLSQVAPEEAMVLIREFAGREIANSRNSGLFSLSFVIAIWTASGAVSTAMTAFDQ 127
Query: 119 AYRV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+++ +MR ++ ++L+S G + + LV+ SF+ L L V AL LL +
Sbjct: 128 IHQIPQEKMRPFWKSKLVSLGLTVGTILLLVLASFLVFISDLLLGMVVNENGALIFLLHL 187
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + + F++ + + I+PG I I W + + LF Y+ F
Sbjct: 188 WQLLRWPLALGIVATAFSFIYRYGTSVWKPGTPIMPGAIVAAIFWAILSALFRLYVANFG 247
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ +Y + +++ +++L+M ++G +LN ++
Sbjct: 248 NYNKVYGAVGTVIVLMLWLWMSAAVLLIGDQLNVTV 283
>gi|326386229|ref|ZP_08207853.1| ribonuclease BN [Novosphingobium nitrogenifigens DSM 19370]
gi|326209454|gb|EGD60247.1| ribonuclease BN [Novosphingobium nitrogenifigens DSM 19370]
Length = 374
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 69/259 (26%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG A + + L+S+FPF + GA L LG + V A P V+A +
Sbjct: 85 NDGTIHAGNFAYMVLISLFPFCITGAALFSLLGKASEREAALSTVLAALPPVVAGVLGPV 144
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
VL L I + + VE +R L RAY R+++ RL S G +L
Sbjct: 145 ARGVLEARTGSLLWIGGAVGLWTVGSLVETIRDVLRRAYGTRMTRAFWERRLGSTGLILA 204
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-FIGLIFVHLFL 200
+ V +++ VAI A + P L + + R T L + +IFV L
Sbjct: 205 SVVLILLAITAQVAIAGAQEALFALAPELDGWIAGLALSRFLPTPLLFAALWIIFVTLTP 264
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ + PGV+F W + + TY Y LA +M L F +++G+
Sbjct: 265 EPYRGRRYPKWPGVLFVTCWWQAITIALPKLLRYLFTYDLTYGSLAGVMIALFFFWLVGL 324
Query: 261 FFILGAELNASMIIYYWRK 279
++GAELNA++ +
Sbjct: 325 GMVVGAELNAALAETPEER 343
>gi|227530303|ref|ZP_03960352.1| ribonuclease BN [Lactobacillus vaginalis ATCC 49540]
gi|227349780|gb|EEJ40071.1| ribonuclease BN [Lactobacillus vaginalis ATCC 49540]
Length = 317
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ ++HF + A+ ++ LLS+FP ++ NL +G TV+ +
Sbjct: 25 NLVAMLVKHFTLAQLSSSAATLAYYTLLSIFPALLVIGNLLPMIGLD--ANTVLTYLQTL 82
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I +L L + G+ T AL A + +S G+ A + S+N AY + E ++
Sbjct: 83 VPATVYSFIRPLVLDFLQRGSGGVLTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPI 142
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ISF ++++ + + ++ F++ L +++ F + + + + T +
Sbjct: 143 SNRVISFIWMIVVVIIIFVIVFLYGVGEQFLKWLQPFLHFNRRYIFLFSSLKWPITFAVI 202
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI L ++ F+P AK + G I W+ + LF Y V FS Y + + +
Sbjct: 203 FIALTMLYYFVPNAKVGLRFAAIGAFLVSIFWLWLSKLFGLYTVLFSHGVIGYKTIGAFI 262
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+V+L G ++GA +NA++ + K
Sbjct: 263 AMMVWLDFSGYLIMMGAAINAALQEAHDGK 292
>gi|197104295|ref|YP_002129672.1| ribonuclease RNase BN (RBN) transmembrane protein [Phenylobacterium
zucineum HLK1]
gi|196477715|gb|ACG77243.1| ribonuclease RNase BN (RBN) transmembrane protein [Phenylobacterium
zucineum HLK1]
Length = 315
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 46/251 (18%), Positives = 110/251 (43%), Gaps = 11/251 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
+A I+ LL++FP + ++ G + V + + +P + + + ++++++
Sbjct: 4 VAGSITFFTLLAIFPALGAFVSIYGLIADVAAVNDQLAQLSLVFPAEVVRIVGEQMMRLA 63
Query: 87 AVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ L F +S L + + ++ G++AL LN AY E R+++ +++ + L
Sbjct: 64 TERSANLSVAFLVSLLLSIWTANAGMKALFDGLNIAYGETETRNFFYRTALTYAFTLAFL 123
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ + ++S + VA P+AL + + R A + F P
Sbjct: 124 LFITLVSAILVAAPIALKTFGLRSGWM-------FGVRWLALFFVAAAAFSVAYRFGPCR 176
Query: 204 KS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ + + G + + W+ G+ F+ Y+ + Y L + + +++++ +
Sbjct: 177 RRARWRWVTWGAVVAAVLWMAGSAGFSWYVNNIAHLQVTYGSLGAAIGFMLWVWFSVLVV 236
Query: 263 ILGAELNASMI 273
+ GAELNA +
Sbjct: 237 LTGAELNAEIE 247
>gi|332686297|ref|YP_004456071.1| ribonuclease BN [Melissococcus plutonius ATCC 35311]
gi|332370306|dbj|BAK21262.1| ribonuclease BN [Melissococcus plutonius ATCC 35311]
Length = 304
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 64/273 (23%), Positives = 128/273 (46%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I ++ + + ++ LLS+FP ++ NL +L + V+ +
Sbjct: 13 LLRFIRTTQRRMIDSEIGNTSVIVAYYLLLSLFPLLIAIGNLLPYLNINP--NHVLPYLA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + L +L + GL ++SAL A + +S + AL+I++N+AY V ++
Sbjct: 71 EIVPESIYHDLEPAFLSLLTRRSGGLLSVSALTALWSASQSINALQIAMNKAYGVKSRKN 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I R++S +LL + LV + + L +++ + ++ + T+
Sbjct: 131 FIIVRIVSLTVILLLLLALVGVVIILGLGKNILDFLQPILKVPTSFIVTFQTLKWPVTLF 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L I + + L +P AK I S++PG +F+ I W++ + +F YI F++ Y + S
Sbjct: 191 VLLIIMCLIFLVVPNAKLTIRSVIPGAVFSTIGWMLLSQVFGIYIKYFNSKVAGYQIIGS 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++L I G +NA + Y K+
Sbjct: 251 FIVLILWLNFAATIIIFGGIINAVVEEYSSEKR 283
>gi|325690874|gb|EGD32875.1| ribonuclease BN [Streptococcus sanguinis SK115]
Length = 307
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 5/269 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + V + +
Sbjct: 17 QFLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ L + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTSLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDNQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ + FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMFYYFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMIIY 275
+ + + M+ I+GA LNAS+ Y
Sbjct: 255 IMVVMMFWFIMIAKILIVGAVLNASIQSY 283
>gi|254463994|ref|ZP_05077405.1| YihY family protein [Rhodobacterales bacterium Y4I]
gi|206684902|gb|EDZ45384.1| YihY family protein [Rhodobacterales bacterium Y4I]
Length = 288
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 4/265 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG----FLGAHQFVPTVIDVVF 67
+ A F ++GW M+SHI++S +L++FPF++F LAG L + + + VF
Sbjct: 14 LLTAARRFNRKNGWVMSSHIAMSMMLALFPFVLFTVALAGTVASLLSQEVEMDLMTEQVF 73
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP+ +A+PI E+ VL L T+ L A YF+SNGV+A+R+++ +AY + R
Sbjct: 74 SVWPDAVARPILTELKSVLQTSNTQLVTLGGLFALYFASNGVDAVRVAMVQAYHDTDTRP 133
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ R + G V++ ++ ++F V +PL + ++ K P +
Sbjct: 134 FWRARALCIGLVIMGGAGILAVAFFEVFLPLYVRHITKLLPFASVPQGWEQGLSGLLALA 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ H+ LP + ILPG + T + W+ A F Y+ +F+ YS YAGLA
Sbjct: 194 LPIGAVLAFHILLPGRIHRFRRILPGAVLTLLLWLACASGFAVYVGSFARYSATYAGLAG 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
M ++FLY+ ILGAE N ++
Sbjct: 254 AMAAMIFLYLNSAILILGAEFNGAL 278
>gi|115372473|ref|ZP_01459781.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|310819113|ref|YP_003951471.1| ribonuclease bn-related protein [Stigmatella aurantiaca DW4/3-1]
gi|115370435|gb|EAU69362.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|309392185|gb|ADO69644.1| Ribonuclease BN-related protein [Stigmatella aurantiaca DW4/3-1]
Length = 307
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 129/271 (47%), Gaps = 6/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ + + A+ ++ +LS+FPF++F LAG + + V +I +
Sbjct: 35 DILGNLRREWKRNKLSDAAAALTFYGVLSLFPFLLFIVALAGLVIQPEQVQALIGELGRE 94
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P ++ + ++ Q+ + P+ GL T SALAA + ++ GV +L +LN AY V E R +
Sbjct: 95 VPPAFSQIPSAQLAQLTSGPSTGLLTFSALAAVWSAAAGVVSLMTALNTAYGVTESRPRW 154
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I+ G +L ++ ++ V VA P + + + ++ R+ L +
Sbjct: 155 KVYGIALGMMLGGALLALLAGLVAVAAPALATRLGQ------PWMALVGWLRLPLAALLM 208
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ LP + K I PG + + W+ ++ F+ Y+ FST+ Y L I+
Sbjct: 209 MSLWATLYSVLPDVRQKFKFITPGSVAGVLVWLAASLGFSFYVSHFSTFGITYGALGGII 268
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ + +LGAE+NA + K
Sbjct: 269 VLLLWMWISSLALMLGAEINAVLARRSSEGK 299
>gi|149185317|ref|ZP_01863634.1| hypothetical protein ED21_19727 [Erythrobacter sp. SD-21]
gi|148831428|gb|EDL49862.1| hypothetical protein ED21_19727 [Erythrobacter sp. SD-21]
Length = 297
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ A+L++FPF + GA + +G I+ V A P V+ I
Sbjct: 11 NDGFIHAGNLAYLAMLAIFPFFILGAAVFSAIGEESERAATINAVLYALPPVVGNVIEPV 70
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
V+ + L A A + + VE +R L RAY ++++ RL S G +L
Sbjct: 71 ARDVVQARSGWLLWAGAFVALWTVGSLVETIRDILRRAYGTEATKAFWKYRLFSTGVILG 130
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
A L++ I A + +FP L + LL + RI + + P
Sbjct: 131 AVFLLMLSLMAQFVIGTAQQVIEAYFPQLVDRLLELQLSRIVPAFGLFGSLYLIFYTLTP 190
Query: 202 AA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ + PGV+ T + W+ + + +F TY Y GLA +M L F +++G+
Sbjct: 191 SKYRRHRYPKWPGVLLTTLWWIAVTTIMPAVLSSFFTYDLTYGGLAGVMIALFFFWLVGL 250
Query: 261 FFILGAELNASMI 273
++GAELNA++
Sbjct: 251 GVVIGAELNAALA 263
>gi|328946554|gb|EGG40693.1| ribonuclease BN [Streptococcus sanguinis SK1087]
Length = 313
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + + E D + ++ L+SVFP ++ N+ + + + +
Sbjct: 22 QLLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--IADFLTAIKDM 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 80 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + N L
Sbjct: 140 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQNFTEPLIYALL 199
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ + FLP K K +LPG F + + +F+ Y+ + + +SI
Sbjct: 200 FSVLVMFYYFLPNVKINKKRYVLPGSAFVLLIILALLNIFSVYMDNYLNHLVDVRFFSSI 259
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + M+ I+GA LNAS+
Sbjct: 260 IMVVMMFWFIMIAKILIVGAVLNASIQ 286
>gi|324993925|gb|EGC25844.1| ribonuclease BN [Streptococcus sanguinis SK405]
gi|327463187|gb|EGF09508.1| ribonuclease BN [Streptococcus sanguinis SK1]
Length = 308
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 60/277 (21%), Positives = 123/277 (44%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
++ F V + + + E D + ++ L+SVFP ++ N+ + V
Sbjct: 7 KKLFGKVRNNQFLRAFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--V 64
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + PE + + + +VL P+ GL + S L+A + S + L+I+ N+A
Sbjct: 65 ADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKA 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y V + R R++S L + + F+ + ++L ++R ++ L + +
Sbjct: 125 YGVAKSRGLISHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQH 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+LF L+ ++ FLP K SK +LPG F ++ + +F+ Y+ + +
Sbjct: 185 FTEPLIYASLFAVLVMLYYFLPNVKISKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNH 244
Query: 239 STMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+SI+ + + ++ I+GA LNAS+
Sbjct: 245 LVDVRFFSSIIMVVMMFWFIIIAKILIVGAVLNASIQ 281
>gi|300857074|ref|YP_003782058.1| putative ribonuclease BN [Clostridium ljungdahlii DSM 13528]
gi|300437189|gb|ADK16956.1| predicted ribonuclease BN [Clostridium ljungdahlii DSM 13528]
Length = 275
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 118/268 (44%), Gaps = 2/268 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + I F+++D A+AS ++ S L S+FPF+VF +L G+ ++ ++ P
Sbjct: 9 LKEFIFRFIQDDVLALASQLAYSLLFSIFPFLVFFISLIGYSDISS--NDILLILSNVLP 66
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + I + +++ L +S + + S G A+ LN+AY E RS +
Sbjct: 67 KNALELIENTVIKTANSKNIELLCLSLILTLWALSGGFHAVIKGLNKAYDQRETRSIFKI 126
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+IS L ++ ++ V + +++ + R +
Sbjct: 127 YIISILCTLGVTLIILCTLLFLVFGQMIGSFLAFRLGLSEGFGFLWNILRYVIIFFGTIL 186
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
V++F P + +LPG +F+ I V+ ++ F Y+ F YS +Y + +++
Sbjct: 187 IFAAVYIFTPNVRLTWRKVLPGAVFSTIGIVIASMGFAFYVNNFGNYSKIYGSIGAVIIL 246
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L +L++L ILG E N+ + +
Sbjct: 247 LTWLFILSTITILGGEFNSVLFKREKNR 274
>gi|168334236|ref|ZP_02692437.1| hypothetical protein Epulo_04779 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 292
Score = 171 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 4/264 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
Y+ + F+ D ++ ++ +L++FPF++ NL ++ ++ V P
Sbjct: 9 YNIKKRFLNHDVSPRSAQMTYYWILAIFPFLLMIINLISYVKIDSI--NFMEYVPKVVPS 66
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
++A + + ++ + + A+ A + +S V L + AY VV+ R++ + +
Sbjct: 67 MVAPLVESTVNSMIEKRSGTGIFVGAVLALWSTSAAVNTLIKGIYLAYGVVDSRNFVVRK 126
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIYATMLALF 190
L Y LL + L+ M + + Y+ K F + L+ R+ + + L
Sbjct: 127 LAGMMYSLLLAFILIAMVVLLIFGNKLGQYILKLFLVRYPKSYTLMWDLTRLCLSWILLI 186
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
F+H +P K + PGV FT ISW V + LF+ Y+ FS Y +MY + I
Sbjct: 187 SSSYFIHRVIPRRHIKNRYLWPGVFFTAISWYVFSYLFSIYVEHFSNYGSMYGSIGGIFV 246
Query: 251 CLVFLYMLGVFFILGAELNASMII 274
L++LY G+F ++GAE+NA ++I
Sbjct: 247 LLIWLYTNGLFILIGAEINAIILI 270
>gi|323351282|ref|ZP_08086938.1| ribonuclease BN [Streptococcus sanguinis VMC66]
gi|322122506|gb|EFX94217.1| ribonuclease BN [Streptococcus sanguinis VMC66]
Length = 308
Score = 171 bits (435), Expect = 8e-41, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 117/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + + + +
Sbjct: 17 QFLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIIVNILPYFHIP--IADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + + L
Sbjct: 135 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQHFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ ++ FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMLYYFLPNVKINKKRFVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + ++ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIIIAKILIVGAVLNASIQ 281
>gi|317501494|ref|ZP_07959692.1| hypothetical protein HMPREF1026_01636 [Lachnospiraceae bacterium
8_1_57FAA]
gi|316897123|gb|EFV19196.1| hypothetical protein HMPREF1026_01636 [Lachnospiraceae bacterium
8_1_57FAA]
Length = 294
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + + I+ I A A+ + +LS+ P + + F +
Sbjct: 3 MKKKWEKIKSQIFKVIITINSHHTGAYAAQAAYFFVLSLIPIFLLLLTMVRFTPI--TMS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ V +PE +A I + QV + + ++ + A + + GV ++ LN
Sbjct: 61 EVMTAVLKVFPESVAPMIRSIVSQVY-FQSGTIVPVTIVVALWSAGKGVLSVTSGLNSIC 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+E R+++ R+ + Y ++ + +V + V + + P L ++ I
Sbjct: 120 ENMETRNYFYLRIRASFYTVIFLLAIVSSLVLSVFGNRISVMIYEHIPFLSKVVEFIIRI 179
Query: 181 RIYATMLALFIGLIFVHLFLPAA----KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + T + L + V+ FLP K+ + LPG +FT W++ + F+ Y+ F
Sbjct: 180 RTFVTFVVLTVFWDLVYRFLPNRRNMAKTTLRKQLPGAVFTACGWLLLSFFFSVYLDVFK 239
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++MY L +I+ +++LY +LG E+NA + + ++
Sbjct: 240 GFTSMYGSLTTIILIMLWLYGCMYIILLGGEINALLEKFLQKR 282
>gi|149276231|ref|ZP_01882375.1| hypothetical protein PBAL39_00887 [Pedobacter sp. BAL39]
gi|149232751|gb|EDM38126.1| hypothetical protein PBAL39_00887 [Pedobacter sp. BAL39]
Length = 329
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 125/272 (45%), Gaps = 2/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVV 66
++ + + ++ AS ++ + +L++FP I+F L F+ F +++ +
Sbjct: 34 LYTVGTFFFKEIGKDSLVNKASSLAYNFMLALFPAIIFLFTLIPFIPKQIGFQERLMEFI 93
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P K + +++ L + + +F++NGV L ++ N++ ++E R
Sbjct: 94 VLILPYDAYKAFETTLNEIVNKQNGRLLSFGFFLSLFFATNGVHNLMMAFNKSSLIIETR 153
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGRIYAT 185
SW RLI+ + + ++++ + +AL Y+R GN + +I R
Sbjct: 154 SWVKQRLIAIVLTITIAFSVILCTVAMTLGEIALTYIRTGLHMKGNFIPYLIQLTRWSLL 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ F+ + ++ + PA K G I + F+ YI FS+Y+ +Y +
Sbjct: 214 GILYFVTISILYRYGPAHAKKWRFFSAGSWLATILAFLTVWGFSFYINNFSSYNKVYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++++ +++LY+ + ++G ELNAS+ +
Sbjct: 274 SALIVLMIWLYLNSLILLVGFELNASVDLSKR 305
>gi|295397716|ref|ZP_06807788.1| YihY family protein [Aerococcus viridans ATCC 11563]
gi|294974045|gb|EFG49800.1| YihY family protein [Aerococcus viridans ATCC 11563]
Length = 329
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 2/260 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
II + + + A+ +S LLS+FP ++ AN+ L +V+ ++
Sbjct: 11 RIIPMTLASVNQANIAGSAAEMSYYFLLSLFPLLMMIANIIPMLPFDP--DSVVGLLETL 68
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + I + L+ G ++S + + S ++ LNR Y + + ++
Sbjct: 69 LPDQVEPIIVPTLESYLSSDTTGALSVSFILILWSGSTAFGTVQNILNRTYGITDKPNFI 128
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I+RL SF + + V +S +FV L V +F L I + + +L L
Sbjct: 129 ISRLFSFAIAFVLVIFAVALSVLFVFGQTLLEAVNQFIDVPMQLFDIFTSVKWPILLLVL 188
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ F++ F+P K + +PG + + V + F+ Y+ F S + +
Sbjct: 189 ILVFTFIYQFIPHHKYPLKFAVPGAVVATLLSAVLSSGFSFYVNNFGGSSVSNGTIGVFI 248
Query: 250 TCLVFLYMLGVFFILGAELN 269
+++L++ + I+GA +N
Sbjct: 249 VLMIYLWLTSIVLIVGAMIN 268
>gi|324994756|gb|EGC26669.1| ribonuclease BN [Streptococcus sanguinis SK678]
Length = 313
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 60/277 (21%), Positives = 123/277 (44%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
++ F V + + + E D + ++ L+SVFP ++ N+ + V
Sbjct: 12 KKLFGKVRNNQFLRAFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--V 69
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + PE + + + +VL P+ GL + S L+A + S + L+I+ N+A
Sbjct: 70 ADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKA 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y V + R R++S L + + F+ + ++L ++R ++ L + +
Sbjct: 130 YGVAKSRGLISHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQH 189
Query: 180 GRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+LF L+ ++ FLP K SK +LPG F ++ + +F+ Y+ + +
Sbjct: 190 FTEPLIYASLFAVLVMLYYFLPNVKISKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNH 249
Query: 239 STMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+SI+ + + ++ I+GA LNAS+
Sbjct: 250 LVDVRFFSSIIMVVMMFWFIIIAKILIVGAVLNASIQ 286
>gi|126736136|ref|ZP_01751879.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
gi|126714302|gb|EBA11170.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
Length = 315
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 116/274 (42%), Gaps = 8/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + E+ +A+ ++ LL++FP I + G L + + + G
Sbjct: 20 DIALRLKDEVSEDRVGLIAAGVAFYGLLALFPAITAILAIGGLLVEPNQIIEQLSALAGI 79
Query: 70 WPEVIAKPITDEILQVLAVP---AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE IT++ V + A Y +S G+ +L +N AY +E R
Sbjct: 80 VPEAAMTIITEQATAVAGSREGGLGLAALLGIGLAIYSASKGMGSLMDGMNVAYDEIEER 139
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +L + G LL + L+I +A+P+A+ + + L + I +
Sbjct: 140 GFIRLKLETLGLTLLLIIGLLIGLSAMIAVPVAINALS--LGVVTETLGTV--VVIAVLL 195
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+GL ++ + P+ + ++ PG I W++G+ F Y+ F +Y+ + L
Sbjct: 196 GLTLVGLAVLYRYGPSRDAAEMQWATPGAIAACFLWLLGSAGFAFYVANFGSYNESFGAL 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L++L++ ILGAELNA M
Sbjct: 256 GGVVILLMWLWISAYVIILGAELNAEMEAQTRHD 289
>gi|331088034|ref|ZP_08336955.1| hypothetical protein HMPREF1025_00538 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330408990|gb|EGG88449.1| hypothetical protein HMPREF1025_00538 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 292
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + + I+ I A A+ + +LS+ P + + F +
Sbjct: 1 MKKKWEKIKSQIFKVIITINSHHTGAYAAQAAYFFVLSLIPIFLLLLTMVRFTPI--TMS 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ V +PE +A I + QV + + ++ + A + + GV ++ LN
Sbjct: 59 EVMTAVLKVFPESVAPMIRSIVSQVY-FQSGTIVPVTIVVALWSAGKGVLSVTSGLNSIC 117
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+E R+++ R+ + Y ++ + +V + V + + P L ++ I
Sbjct: 118 ENMETRNYFYLRIRASFYTVIFLLAIVSSLVLSVFGNRISVMIYEHIPFLSKVVEFIIRI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAA----KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + T + L + V+ FLP K+ + LPG +FT W++ + F+ Y+ F
Sbjct: 178 RTFVTFVVLTVFWDLVYRFLPNRRNMAKTTLRKQLPGAVFTACGWLLLSFFFSVYLDVFK 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++MY L +I+ +++LY +LG E+NA + + ++
Sbjct: 238 GFTSMYGSLTTIILIMLWLYGCMYIILLGGEINALLEKFLQKR 280
>gi|125718301|ref|YP_001035434.1| ribonuclease BN [Streptococcus sanguinis SK36]
gi|125498218|gb|ABN44884.1| Ribonuclease BN, putative [Streptococcus sanguinis SK36]
Length = 303
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 61/278 (21%), Positives = 121/278 (43%), Gaps = 7/278 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++ F V + + + E D + ++ L+SVFP ++ N+ +
Sbjct: 1 MKKLFGKVRNNQFLRAFFRFYKEADSELTSVAVAYYWLISVFPLLLIVVNILPYFHIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + PE + + + +VL P+ GL + S L+A + S + L+I+ N+
Sbjct: 59 VADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R R++S L + + F+ + ++L ++R ++ L +
Sbjct: 119 AYGVAKSRGLISHRVMSLFVSLGLQILFALTLFLTMFGHMSLDFLRTYWKLDSQLYQHLQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N LF L+ + FLP K K +LPG F ++ + +F+ Y+ +
Sbjct: 179 NFTEPLIYALLFAVLVMFYFFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLN 238
Query: 238 YSTMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+ +SI+ + + ++ I+GA LNAS+
Sbjct: 239 HLVDVRFFSSIIMVVMMFWFIIIAKILIVGAVLNASIQ 276
>gi|315639598|ref|ZP_07894738.1| YihY family protein [Enterococcus italicus DSM 15952]
gi|315484559|gb|EFU75015.1| YihY family protein [Enterococcus italicus DSM 15952]
Length = 313
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 58/243 (23%), Positives = 112/243 (46%), Gaps = 2/243 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A D + ++ LLS+FP ++ N+ FL + T++ + P I
Sbjct: 21 ASNRISTSDIGNTSVVVAYYLLLSLFPLLIAVGNILPFLSINP--NTILPYLQEMIPSQI 78
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
I I +L + L ++SAL A + +S + L+ ++NRAY V + ++ I R++
Sbjct: 79 YDFIGPAIKDLLTQGSGKLLSVSALGALWSASQSINGLQTAMNRAYGVEQRSNFIIVRIV 138
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
SF ++ +++V + V + L ++ F + + + T+L L L
Sbjct: 139 SFFVIIFFMISIVGVFLVMGIGKVILDILQPIFQIPSEWISLFQTIKWPVTILGLLAMLT 198
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P AK K+ S LPG IFT W+ + +F Y + F+ + Y + S + +++
Sbjct: 199 MIYWIVPNAKVKLRSALPGAIFTTAGWMALSQIFGLYAMYFTRRISGYQIIGSFIVLMIW 258
Query: 255 LYM 257
L
Sbjct: 259 LNF 261
>gi|227510013|ref|ZP_03940062.1| ribonuclease BN [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190508|gb|EEI70575.1| ribonuclease BN [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 299
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 55/279 (19%), Positives = 124/279 (44%), Gaps = 2/279 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + I + H+ + D A+ ++ +L+S+FP + G ++ H
Sbjct: 2 IKSIYLKTKQFIQTLVSHYSQGDVSDSAAVLAFYSLMSIFPILFIGGSILNLFHIH--TG 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ V +P+ I + I L +I + + +S + A + S+N+AY
Sbjct: 60 DIMEYVRPIFPDRIYVMLEPVIDSTLRSGGTSQLSIGLIVTIWSASRAIAAFQRSINKAY 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E ++ R++SF ++LL V +V + F +++ +++ +
Sbjct: 120 GVAEDQTAISNRILSFLWMLLLIVVVVAVMIAFALSQFVFSWLSPILHIPQSIISFVSTV 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +TM+ +++ L + +P AK K + G +FT + +V A F+ Y+ F+
Sbjct: 180 KWPSTMILVWLLLSVLFYIVPTAKVKFRYVWFGALFTTLGLMVLAQAFSIYVTFFAHRVD 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + + + + +L G+ +LG +NA++ K
Sbjct: 240 AYKTIGTFIVLMFWLDFSGLIMLLGGVINATIQELRMGK 278
>gi|89054703|ref|YP_510154.1| ribonuclease BN, putative [Jannaschia sp. CCS1]
gi|88864252|gb|ABD55129.1| ribonuclease BN putative [Jannaschia sp. CCS1]
Length = 307
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 8/266 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ E+ + + ++ LL++FP I + G + + +FG P+
Sbjct: 16 RLRDDIAEDRVCLIVAGVAFYGLLALFPNITALIAVNGLPVEPSAIVDQLRSLFGVVPQE 75
Query: 74 IAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ ITD+ + G L A Y +S G+ +L +N AY E R +
Sbjct: 76 LIAIITDQATAIAGSREDGFGLAVVTGVLVALYSASKGMSSLMEGINIAYDEHEKRGFIR 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L +F + + LVI + P AL G + +I G A +
Sbjct: 136 LKLATFAQTIFLILGLVITLLAMLGRPAALGIA----DLGGVVEPLISIGLFLALPVLTM 191
Query: 191 IGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+GL ++ + P+ G I + + + F Y+ F +Y+ LA +
Sbjct: 192 LGLSVLYPYAPSRDEPEWKWASLGRIERCLLRLAASAGFPFYVSNFGSYNDGIGALAGDI 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
L + ++ + GAELNA + +
Sbjct: 252 VVLTWFWISAFIILKGAELNAELEAH 277
>gi|332359440|gb|EGJ37260.1| putative ribonuclease BN [Streptococcus sanguinis SK355]
Length = 307
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + + + +
Sbjct: 17 QFLREFFRFYKESDSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--IADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ + FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMFYYFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + M+ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIMIAKILIVGAVLNASIQ 281
>gi|239626306|ref|ZP_04669337.1| ribonuclease BN [Clostridiales bacterium 1_7_47_FAA]
gi|239516452|gb|EEQ56318.1| ribonuclease BN [Clostridiales bacterium 1_7_47FAA]
Length = 278
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 122/270 (45%), Gaps = 3/270 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + + E++ A+ +S +LSV PFI+ + + ++++ G P
Sbjct: 10 VKQVYDKYAEDEMTVYAAQVSFFIILSVVPFIMLLLTAVQMIPSISNAQ-FMELIVGLVP 68
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + +++A+ A + + G+ ++ LNR + E R + +
Sbjct: 69 VDYKSLAFRVVNDLSLKSPATMISVTAITALWSAGRGMFSVARGLNRVHGHGEKRWYVVG 128
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RLI GY ++ + ++ + V + A++ FP + +++ I N R ++ L +
Sbjct: 129 RLICSGYTIVFILVCILSLGLLVFGNMIQAFMVNRFPIVADVVTHIINFRALWALMILIM 188
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS--TYSTMYAGLASIM 249
+ ++ F+P K K+ +PG +F+ + W+ + F+ Y YS MY L +I+
Sbjct: 189 FFLGIYTFVPDKKLKLQDQIPGAVFSTVGWMAFSFAFSLYFNHIGGRNYSYMYGSLTAIV 248
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LYM GAE+N + R+
Sbjct: 249 LLLLWLYMCMCILFFGAEINYYWKELFGRE 278
>gi|227512948|ref|ZP_03942997.1| ribonuclease BN [Lactobacillus buchneri ATCC 11577]
gi|227523075|ref|ZP_03953124.1| ribonuclease BN [Lactobacillus hilgardii ATCC 8290]
gi|227083807|gb|EEI19119.1| ribonuclease BN [Lactobacillus buchneri ATCC 11577]
gi|227089756|gb|EEI25068.1| ribonuclease BN [Lactobacillus hilgardii ATCC 8290]
Length = 299
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 124/279 (44%), Gaps = 2/279 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + I + H+ + D A+ ++ +L+S+FP + G ++ H
Sbjct: 2 IKSIYLKTKQFIQTLVSHYSQGDVSDSAAVLAFYSLMSIFPILFIGGSILNLFQIH--TG 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ V +P+ I + I L +I + + +S + A + S+N+AY
Sbjct: 60 DIMEYVRPIFPDRIYVMLEPVIDSTLRSGGTSQLSIGLIVTIWSASRAIAAFQRSINKAY 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E ++ R++SF ++LL V +V + F +++ +++ +
Sbjct: 120 GVAEDQTAISNRILSFLWMLLLIVVVVAVMIAFALSQFVFSWLSPILHIPQSIISFVSTV 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +TM+ +++ L + +P AK K + G +FT + ++ A F+ Y+ F+
Sbjct: 180 KWPSTMILVWLLLSVLFYIVPTAKVKFRYVWFGALFTTLGLMILAQAFSIYVTFFAHRVD 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + + + + +L G+ +LG +NA++ K
Sbjct: 240 AYKTIGTFIVLMFWLDFSGLIMLLGGVINATIQELRMGK 278
>gi|163789761|ref|ZP_02184198.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
gi|159874983|gb|EDP69050.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
Length = 329
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 52/249 (20%), Positives = 114/249 (45%), Gaps = 2/249 (0%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ + A+ ++ LLS+FP ++ AN+ + ++ ++ A P I +
Sbjct: 27 RAEVSSNAAELAYFTLLSLFPILLVIANIIPLFPIN--ASDILPMLETAVPPDIYNVLAP 84
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ L+ + G +I + + + +S AL+ LN Y V + ++ I RL+SF L
Sbjct: 85 VLESYLSSSSGGAISIGLITSLWSASKAFNALQNVLNDVYGVEKRNNFIIVRLVSFLVQL 144
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + + F+FV L +++ F +L+L ++ + ++ L + + V+ +
Sbjct: 145 VIVAIVGALIFIFVFGEQILLFIQDFIGIDLSLILQVFGYKWLVLLVVLILVITMVYFLV 204
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P + I LPG IF + W++ + FT Y+ + A + +++LY+ +
Sbjct: 205 PNHRLHIKYALPGAIFATVGWLILSQAFTLYVKYAGGEAAASATFGVFIVLMLWLYLSAI 264
Query: 261 FFILGAELN 269
++G +N
Sbjct: 265 ILLIGGLIN 273
>gi|327489904|gb|EGF21693.1| ribonuclease BN [Streptococcus sanguinis SK1058]
gi|332367079|gb|EGJ44817.1| ribonuclease BN [Streptococcus sanguinis SK1059]
Length = 308
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 120/276 (43%), Gaps = 6/276 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMAS-HISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + I + A F ++S ++ L+SVFP ++ N+ + V
Sbjct: 8 KFFAKISRNQFLRAFFRFYRAADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VA 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY
Sbjct: 66 DFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAY 125
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + R R++S L + + F+ + ++L ++R ++ L + N
Sbjct: 126 GVAKSRGLISHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQNF 185
Query: 181 RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
LF L+ ++ FLP K K +LPG F ++ + +F+ Y+ + +
Sbjct: 186 TEPLIYALLFAVLVMLYYFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHL 245
Query: 240 TMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+SI+ + + ++ I+GA LNAS+
Sbjct: 246 VDVRFFSSIIMVVMMFWFIIIAKILIVGAVLNASIQ 281
>gi|260907006|ref|ZP_05915328.1| putative ribonuclease BN [Brevibacterium linens BL2]
Length = 312
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/269 (21%), Positives = 117/269 (43%), Gaps = 4/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ + I H + + G +A+ ++ ALLS+ P + ++ G +G + + +
Sbjct: 42 ILTNTIRHVISDQGLDLAAGLAFYALLSMAPATLALVSMLGVVGEAKSTTEAVLGLTSDL 101
Query: 71 PEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A+ I + ++++ PA GL +S A + SS V A + NRAY V E R +
Sbjct: 102 STEAAQAIRPIVTELVSSPAAGLTLIVSVAVAIWSSSKYVGAFGRAANRAYAVEETRPLW 161
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATMLA 188
+ + L+ + + + + V + K LG + ++IW+ R +
Sbjct: 162 KLKPMMLLITLVLLLLMAGLGLLLVVSGPIAESIGKLV-GLGPVAVMIWSIARWPVVIFF 220
Query: 189 LFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P K K G ++ +V ++ F YI F Y+ Y +
Sbjct: 221 VMLAIALLYYATPNVKKVKFRWSSIGAFVAPMTLIVVSLGFVLYINNFDNYNATYGAIGG 280
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ +L+M+ + I G+EL+A +
Sbjct: 281 VIVGFAWLWMVNLALIFGSELDAEIRRSR 309
>gi|283796441|ref|ZP_06345594.1| YihY family protein [Clostridium sp. M62/1]
gi|291075850|gb|EFE13214.1| YihY family protein [Clostridium sp. M62/1]
gi|295091415|emb|CBK77522.1| Predicted membrane protein [Clostridium cf. saccharolyticum K10]
Length = 279
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ FV+++ A+ S +LS PFI+ + F+ A Q + ++ P
Sbjct: 9 KQIYDKFVKDEITVYAAQASFFIVLSSVPFIILLLTVLQFVPAVQ-QSDFLYLLSRLLPI 67
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + ++ + + L ++S++ + +S G+ + LNR R + I+R
Sbjct: 68 EVQPLVYTIVDEIYSKSSAALLSVSSITTLWSASRGMLGIEKGLNRIAGSPRRRGYVISR 127
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+I+ GY ++ ++ + V + + K P L L + + R ++ L
Sbjct: 128 IINSGYTIVFMAVCILSLILLVFGTVIQNLIFKILPFLQGLSPYLISLRSMLALVILVAF 187
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ FLP + ++ LPG +F+ + W++ + + Y FS++STMY LAS+ +
Sbjct: 188 FMGLYTFLPYERQRLRCQLPGAVFSTLCWILFSYASSLYFKYFSSFSTMYGSLASLAVLM 247
Query: 253 VFLYMLGVFFILGAELNA---SMIIYYWRKKP 281
++LY LGAE+N ++ Y + ++P
Sbjct: 248 LWLYFCICILFLGAEINCHLTALGRYRFCRRP 279
>gi|317497559|ref|ZP_07955877.1| ribonuclease BN-like family protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895118|gb|EFV17282.1| ribonuclease BN-like family protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 289
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+I I+ ++ A ++ + +LS FPF++ +L + +I++V
Sbjct: 7 MIGSVIDKAQKDHVTAFSAQAAFFTILSFFPFMIVLLSLTRYFPITP--NDMIELVRTYL 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + I + +I+ L + +S G+ +L LN + + E R++++
Sbjct: 65 PPKYSGMVVPIIRSLNGKLTTTYMSITILTLLWSASKGILSLMTGLNTIHEIPEKRNYFV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R IS Y+ L ++ ++ + + L + +F P L N + R +
Sbjct: 125 LRFISSIYIGLFAIAVLFGLILLLFGNSLLIQLYRFEPVLENKHVFFATIRFFLAFFTFM 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ I ++ FLP+ K ILPG F+ +W V + F+ Y FS +STMY GL SI+
Sbjct: 185 VVFIIMYRFLPSENFKTKQILPGAFFSSAAWFVLSFFFSMYFDNFSFFSTMYGGLTSILL 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +LY + +GAE+N I +K
Sbjct: 245 TLFWLYFCMMMLFIGAEINHYFISQSSKK 273
>gi|160935740|ref|ZP_02083115.1| hypothetical protein CLOBOL_00630 [Clostridium bolteae ATCC
BAA-613]
gi|158441484|gb|EDP19194.1| hypothetical protein CLOBOL_00630 [Clostridium bolteae ATCC
BAA-613]
Length = 279
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 3/259 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F E++ A+ +S +LSV PFI+ + + ++++ G P
Sbjct: 9 KRVYDKFAEDEMTVYAAQVSFFIILSVVPFIMLLLTAVQMIPSISNAR-FMELIVGLVPV 67
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + +++A+ A + + G+ ++ LNR E R + I R
Sbjct: 68 DYKSLAFRVVNDLSLKSPATMISVTAVTALWSAGRGMFSVARGLNRVNGHGEKRWYVINR 127
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI GY ++ + ++ + V + A++ FP + ++ I N R ++ L I
Sbjct: 128 LICSGYTIVFILVCILSLGLLVFGNMIQAFMVSRFPIIADVTTHIINFRALWALMILIIF 187
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS--TYSTMYAGLASIMT 250
+ ++ F+P K+ LPG +F+ + W+ + F+ Y YS MY L +I+
Sbjct: 188 FLGIYTFVPDKSLKLRDQLPGAVFSTVGWMAFSFAFSLYFSHIGGKNYSYMYGSLTAIVL 247
Query: 251 CLVFLYMLGVFFILGAELN 269
L++LY GAE+N
Sbjct: 248 LLLWLYFCMCILFFGAEIN 266
>gi|108804245|ref|YP_644182.1| ribonuclease BN [Rubrobacter xylanophilus DSM 9941]
gi|108765488|gb|ABG04370.1| ribonuclease BN, putative [Rubrobacter xylanophilus DSM 9941]
Length = 317
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 6/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ + E+ A A +++ ++FPF +L G A V T+++ +
Sbjct: 31 DLLKLTLREMQEDHVSAYAGNLTYKVFFAIFPFFTLLLSLLGLFDATDLVRTMLENLSRV 90
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT----ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ + + ++L + A+G FT IS L A + S + ++ ++N Y V E
Sbjct: 91 MPQSALRFVESQLLSITQSQAEGAFTAGAVISILLALWGVSGAMRSVMEAMNVMYEVEEN 150
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYA 184
R ++ IS L + L++ + V + LG + IW+
Sbjct: 151 RPFWKVYGISILISLAVAALLILALLLLVFGAAFGGGLASLV-GLGPVFAAIWSVAQWPI 209
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ V+ F PA + + I G + ++ W++ ++ F+ Y+ F +Y+ Y
Sbjct: 210 LACFVLFAFALVYYFAPAVEQRWRWISAGSVLAFVFWLIFSLAFSLYVANFGSYNATYGS 269
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA I+ L+++Y + +LGAELN + +
Sbjct: 270 LAGIIIFLLYVYYSSLIVLLGAELNQVIEWH 300
>gi|254418863|ref|ZP_05032587.1| Ribonuclease BN-like family [Brevundimonas sp. BAL3]
gi|196185040|gb|EDX80016.1| Ribonuclease BN-like family [Brevundimonas sp. BAL3]
Length = 434
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + + +A ++ LLS+FP + L G + + ++G
Sbjct: 108 DILWRTGASYFGDRVGFVAGGVTFFTLLSLFPLLGTFVTLYGLFADPADAWSRLQFLYGV 167
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL----AAAYFSSNGVEALRISLNRAYRVVEM 125
P IA + E+ ++ A G T + + + + ++ V+ L LN AY VE
Sbjct: 168 MPSSIAAFLGGEMERLAANSN-GQLTFTLIWTLALSLWTANGAVKVLFYGLNIAYHEVER 226
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ L+ G+ L A + + +F ++ + V L ++ R
Sbjct: 227 RNIVRYNLLCMGFTLGA-----VAAVLFSSLLVVGVPVVVGLFGLQEEWGLLALLRWPLL 281
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L ++ F P K++ + PG IF + + + +F+ Y+ F + Y
Sbjct: 282 LVGYVAALTLIYRFGPCRQKARWRWLTPGAIFAAVVSLTVSFVFSWYLTNFV-RTDSYGP 340
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
LA++M L++ ++ ++GAELNA +
Sbjct: 341 LAAMMGFLLWTWLSVQVILMGAELNAEIE 369
>gi|50953981|ref|YP_061269.1| membrane protein [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50950463|gb|AAT88164.1| membrane protein [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 348
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 110/271 (40%), Gaps = 4/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ + F + +A+ ++ +L++FP ++ ++ G +G + + +
Sbjct: 19 HILKRTLRSFGRDACTDLAAGLTYFGVLALFPALIALVSVLGLVGQSKTGIDALFGMADQ 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ I + PA G I + A + +S V +LNR Y V E RS
Sbjct: 79 LAPGMLDVAHGPIEALSTSPATGWGLVIGIVGALWSASGYVGGFGRALNRVYGVEEGRSA 138
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATML 187
++ R + G + A + I++ V V + LG+ W R A +
Sbjct: 139 FVLRPVQLGVTVAAVALVAIVAVVLVVSGPIARTIGGAI-GLGDAAQTAWEILRWPAVAV 197
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
AL + + ++ P K + G + V +VLF Y+ +Y Y LA
Sbjct: 198 ALVVLVALLYSATPNVKRPGFRWLTAGSFTAIVLLGVASVLFAFYVANVGSYDKTYGALA 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L+++++ V +LGAEL++ +
Sbjct: 258 GVIVFLLWIWIANVALLLGAELDSEIERARQ 288
>gi|291522420|emb|CBK80713.1| Predicted membrane protein [Coprococcus catus GD/7]
Length = 282
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 2/262 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + ++ E+ A AS + +LS FPF +F L + +++++
Sbjct: 4 ILRWVKGFLKKNTEDHLGAYASQAAFFIVLSAFPFCIFLLTLLRYSPL--TYEDLLNILQ 61
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P++ I + +V + + + + + + G+ ++ +N Y + E R+
Sbjct: 62 MLSPKMANDVIRLVMKEVYEQSTIAITSFTIIFVLWSAGRGILSITRGINEIYHINETRN 121
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ R IS Y L +V L++ + V + V K P L + + R+
Sbjct: 122 YFYIRFISAVYTLWLAVALIVTLGLLVFGNVFYRKVIKLLPVLHEFAAFVISIRMLIIFG 181
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + IFV+ LP K+ ++ +LPG I I W++ + +F Y ++ MY LA
Sbjct: 182 LLTMFFIFVYKVLPNKKTPLLYVLPGAISCSIGWMITSSIFAIYFNYSHSFIYMYGSLAG 241
Query: 248 IMTCLVFLYMLGVFFILGAELN 269
IM +++LY LGAELN
Sbjct: 242 IMMIMLWLYTCMYQLFLGAELN 263
>gi|327461083|gb|EGF07416.1| ribonuclease BN [Streptococcus sanguinis SK1057]
Length = 308
Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 115/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + V + +
Sbjct: 17 QFLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ L + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTSLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDNQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ + FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMFYYFLPNVKINKKRYVLPGSAFVLLTILSLLNIFSVYMDNYLNHLVDVRSFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + ++ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIIIAKILIIGAVLNASIQ 281
>gi|259503840|ref|ZP_05746742.1| ribonuclease BN [Lactobacillus antri DSM 16041]
gi|259168219|gb|EEW52714.1| ribonuclease BN [Lactobacillus antri DSM 16041]
Length = 332
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 2/277 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + + HF + A+ ++ LLS+FP ++ NL +G
Sbjct: 37 MKNEPGKFKNFVLLLMRHFTMAQISSSAAMLAYYTLLSIFPAVLVIGNLLPMVGLD--AN 94
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + I I L + GL T AL A + +S G+ A + S+N Y
Sbjct: 95 TVLSYLQTAVPSSVYVFIKPLIYDFLRRGSGGLLTTGALIALWSTSQGIAAFQRSVNLTY 154
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V ++ I R++SF ++++ + + ++ ++ L ++ F + + +
Sbjct: 155 DVARNQNPVINRVVSFIWMIVVIILIFVIVLLYGFGEQVLNSIQPFLQFNRRYISLFNSL 214
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LFI L ++ F+P AK ++ G + + W+ + LF++Y V F
Sbjct: 215 RWPVALAVLFIALTLLYYFVPNAKVRLRYAATGALLAALLWMGLSRLFSYYTVFFRHSVV 274
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L + G +LGA LNA++ +
Sbjct: 275 SYKTIGAFIAMMIWLDLSGYVIMLGAVLNATLQEAHE 311
>gi|167765672|ref|ZP_02437725.1| hypothetical protein CLOSS21_00160 [Clostridium sp. SS2/1]
gi|167712647|gb|EDS23226.1| hypothetical protein CLOSS21_00160 [Clostridium sp. SS2/1]
gi|291559907|emb|CBL38707.1| Predicted membrane protein [butyrate-producing bacterium SSC/2]
Length = 289
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+I I+ ++ A ++ + +LS FPF++ +L + +I++V
Sbjct: 7 MIGSVIDKAQKDHVTAFSAQAAFFTILSFFPFMIVLLSLTRYFPITP--NDMIELVRTYL 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + I + +I+ L + +S G+ +L LN + + E R++++
Sbjct: 65 PPKYSGMVVPIIRSLNGKLTTTYMSITILTLLWSASKGILSLMTGLNTIHEISEKRNYFV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R IS Y+ L ++ ++ + + L + +F P L N + R +
Sbjct: 125 LRFISSIYIGLFAIAVLFGLILLLFGNSLLIQLYRFEPVLENKHVFFATIRFFLAFFTFM 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ I ++ FLP+ K ILPG F+ +W V + F+ Y FS +STMY GL SI+
Sbjct: 185 VVFIIMYRFLPSENFKTKQILPGAFFSSAAWFVLSFFFSMYFDNFSFFSTMYGGLTSILL 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +LY + +GAE+N I +K
Sbjct: 245 TLFWLYFCMMMLFIGAEINHYFISQSSKK 273
>gi|229916931|ref|YP_002885577.1| ribonuclease BN [Exiguobacterium sp. AT1b]
gi|229468360|gb|ACQ70132.1| ribonuclease BN [Exiguobacterium sp. AT1b]
Length = 281
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 55/274 (20%), Positives = 112/274 (40%), Gaps = 2/274 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F +F + D F + ++ ++ L++FP V + + + +I+
Sbjct: 2 FESMFRLAVDVRHRFKDHHINDYSATLAFFWFLAIFPTFVVLFAVMAWFQIDDAL--LIE 59
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P + + + V GL ++SA+ A + +SNG L AY E
Sbjct: 60 QIETLIPGSSVRELLSIVYDVSGNLNGGLLSVSAIIAFWSASNGTARLVKLTVFAYGETE 119
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + RLI +L S+ VI+ + + + +P + + R
Sbjct: 120 ARGYIFRRLIGLLVILAGSIGAVILIVFHLFGQEFVELIYALYPQVEEFDRLSTVTRYTV 179
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + L I + P + + + LPG +F ISW + + ++ Y+ FS Y
Sbjct: 180 STIILIIAFSLFYKIAPQQRVRFIETLPGAVFAVISWQLLSTGYSIYVERFSILGDTYGT 239
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ ++LY+ ++GAE+NA+ + R
Sbjct: 240 IGAVILLQIWLYLTAATMLIGAEINAAWPYHMTR 273
>gi|255038759|ref|YP_003089380.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
gi|254951515|gb|ACT96215.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
Length = 310
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 119/263 (45%), Gaps = 1/263 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++DII + + + + AS ++ S L+ FP I+F L ++ ++ ++
Sbjct: 30 LYDIILNLVASNRKHEIDQRASAVAYSLTLAAFPGIIFLFTLIPYIPIENLDQQILVLLR 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + IL +++ P G+ ++ + A S+NG+ +L S + Y E R
Sbjct: 90 NNMPQGTFEAADQTILDIVSRPRSGVLSLGFIFAMIASTNGMMSLMRSFDMVYDDKETRG 149
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
+ R I+ LL L + + + ++ V + N L+ + N R +
Sbjct: 150 FLAIRGIATLLTLLLIAVLCLSVVLLIVGDAVMSIVGDWHIIRDNWLIALLNILRYLISF 209
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+L + + ++ F P+ + + G + + + F+ Y+ FS+Y+ +Y +
Sbjct: 210 GSLMLTISIIYRFAPSHGRQFTFVNAGSVIASVLILAATYGFSFYLSRFSSYNKLYGSIG 269
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
+++ ++++Y+L ILG E+N
Sbjct: 270 TMIALMIWIYLLAFVIILGFEIN 292
>gi|253314945|ref|ZP_04838158.1| hypothetical protein SauraC_01970 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
Length = 291
Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 100/207 (48%)
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + I I + + GL +I + A + +SNG+ A+ S N AY V +
Sbjct: 1 MLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDS 60
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ + +L+S + ++ V V+ + + ++ + I RI
Sbjct: 61 RNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLP 120
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ +FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +
Sbjct: 121 IIIIFIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSI 180
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
A I+ L++LY+ I+GAE+NA +
Sbjct: 181 AGIIILLLWLYITSFIIIVGAEINAII 207
>gi|153812966|ref|ZP_01965634.1| hypothetical protein RUMOBE_03373 [Ruminococcus obeum ATCC 29174]
gi|149830913|gb|EDM86003.1| hypothetical protein RUMOBE_03373 [Ruminococcus obeum ATCC 29174]
Length = 320
Score = 168 bits (427), Expect = 7e-40, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 3/279 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ +I ++ E+ A A+ + ++S PF++ L +
Sbjct: 24 KKTDKSTVGLILGFVKRMQEDHIGAYAAQAAYFLIMSFIPFVLVLTALVQYTPL--TYRM 81
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + G P + + I +V + + IS L A + S G+++L LN Y
Sbjct: 82 LRQAILGFVPLNLQDFVLKIIAEVFT-KSAAVVPISGLFALWSSGKGMQSLIAGLNVIYH 140
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E R+W RL S Y+ L + ++I + V A + P LG +L + + +
Sbjct: 141 VKETRNWLTNRLYSMLYMFLFVLAIIISLLLLVMGNRIHAALVIHAPLLGRMLGRLLSAK 200
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + LF+ + ++ +LP K+ + S +PG ++W + + F+ Y F +S M
Sbjct: 201 TFLVFVVLFLVFLVLYRYLPNRKASLKSQVPGAFIIAVAWSLFSYFFSLYFTFFPNFSNM 260
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y L++++ +++LY+ + GAE+NA + + +
Sbjct: 261 YGSLSALIMVMLWLYVCMNLLLYGAEINAYFEKEFRQAQ 299
>gi|304320880|ref|YP_003854523.1| hypothetical protein PB2503_06577 [Parvularcula bermudensis
HTCC2503]
gi|303299782|gb|ADM09381.1| hypothetical protein PB2503_06577 [Parvularcula bermudensis
HTCC2503]
Length = 318
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 112/276 (40%), Gaps = 10/276 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ + +++ +A+ ++ A LSVFP +V L G + + I
Sbjct: 21 LKRWRKAVFSLLGRIGQDNLSLVAAGVAFFAFLSVFPALVALVGLVGLIADPVDIVDGIA 80
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYR 121
V+ P I E+ ++ +GL S A + ++ GV+ +L +
Sbjct: 81 VLAPVLPPNALDLIQTELSRIAEGRGEGLLVTTLFSLSIALWSANRGVKNFAFALTIVHD 140
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R+ + +IS + + V IP+ L ++ L N + +
Sbjct: 141 ETTSRNIVVINVISLALTAIMLFGAIAALSVVAIIPIGLQFL-----GLPNGAERLISIA 195
Query: 182 IYATMLALFIGLI-FVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + L + L V + P ++ PG + I WV ++LF++Y+ + +S
Sbjct: 196 QWIFLFVLIVALATVVLKWAPDRRAPTWRWSWPGALLGTILWVGTSLLFSYYVRHVNNFS 255
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y LA++ +++ Y+ F++G ELNA++
Sbjct: 256 ATYGSLATVTVVMLWSYLSAFVFLIGGELNAALERQ 291
>gi|328956776|ref|YP_004374162.1| putative integral inner membrane protein with ribonuclease fold
[Carnobacterium sp. 17-4]
gi|328673100|gb|AEB29146.1| putative integral inner membrane protein with ribonuclease fold
[Carnobacterium sp. 17-4]
Length = 331
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 60/269 (22%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ F ++ ++ + A A+ ++ LLS+FP ++ AN+
Sbjct: 14 KDKFKHFLEVFK---PNWARAEVSANAAQLAYFTLLSLFPILLVVANVIPLFPID--AAD 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ +V A P I + + L+ + G +I + + + +S AL+ LN Y
Sbjct: 69 ILPMVETAVPPDIYNVLAPILENYLSSSSGGAISIGLITSLWSASKAFNALQDVLNEVYG 128
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ I RL+SF L + ++ FVFV L ++ F +L+L +++ +
Sbjct: 129 VEKRNNFIIVRLVSFLVQLAIVAIVGVVIFVFVFGEFILLFLEDFVGIELDLVLQVFSYK 188
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + + V+ +P + I LPG +F I W+V + FT Y+ +
Sbjct: 189 WLVLFIVLILIITMVYFLVPNHRMHIKYALPGAVFATIGWMVLSQAFTLYVQFAGGEAAA 248
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNA 270
A + +++LY+ + +LGA +NA
Sbjct: 249 SATFGVFIVLMLWLYLSAIILLLGALINA 277
>gi|103486149|ref|YP_615710.1| ribonuclease BN [Sphingopyxis alaskensis RB2256]
gi|98976226|gb|ABF52377.1| ribonuclease BN [Sphingopyxis alaskensis RB2256]
Length = 355
Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I+ + + G+ A +++ AL+++FPF + A +G ++ VF
Sbjct: 69 YRIVRRVVVGTYTD-GFIHAGNLAYLALIALFPFFILLAAALSLVGGSVGGERAVEAVFS 127
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +AK ++ I +V++ + AL A + + +E +R L RAY + +
Sbjct: 128 TMPPTVAKALSGPIREVMSARTGIFLWLGALVALWTVGSLIETVRDILRRAYGTHFSKGF 187
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ RL+S G + A V +++ + V I +V + P +++ R +
Sbjct: 188 FHYRLLSIGIITGAVVLMLLSFSMQVLIVGVEQFVTRVLPEQYQARGLVFISRAVSGFGL 247
Query: 189 LFIGLIFVHLFLPA--AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + P+ + K PG +FT + W+ + + + +Y Y LA
Sbjct: 248 FVAIYLLFYSLTPSKYRRLKRCPKWPGALFTTLWWIGVTLALPPLLASLLSYDATYGSLA 307
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+M L F Y++G+ ++GAELNA+++
Sbjct: 308 GVMVALFFFYLVGLGMVMGAELNAALV 334
>gi|186683817|ref|YP_001867013.1| ribonuclease BN [Nostoc punctiforme PCC 73102]
gi|186466269|gb|ACC82070.1| putative ribonuclease BN [Nostoc punctiforme PCC 73102]
Length = 299
Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 123/276 (44%), Gaps = 5/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFV 59
R ++ + + + +E +AS I+ +A+LS+FP I+ G L
Sbjct: 8 RFFYYLNWRTLKKTFARTMERRLLGLASEIAFNAMLSLFPAILAVLTAIGLLAESLQATF 67
Query: 60 PTVIDVVFGAWPEVIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + PE I D ++ GLF++S + A + +S V +L++
Sbjct: 68 KQLAAQLSQILPEEALVLIRDFATTEITNSRNSGLFSLSFVLAIWTASGAVSTAMTALDQ 127
Query: 119 AYRV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+++ MR ++ +L+S G + + LV+ SF+ L V + +L LL +
Sbjct: 128 IHQIPSENMRPFWKAKLVSLGLTVGTMLLLVLASFLVFTSDWLLGMVVRENGSLIVLLHL 187
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + + + FV+ + P+ + ++PG I + W + + LF Y+ F
Sbjct: 188 WQLLRWPLALSIVAVAFGFVYRYGPSVWNSGTPMMPGAILAAVFWAILSALFRLYVANFG 247
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ +Y + +++ +++L M ++G +LN ++
Sbjct: 248 NYNKVYGAVGAVIVLMLWLSMSAAVLLIGDQLNVTV 283
>gi|253681524|ref|ZP_04862321.1| ribonuclease BN [Clostridium botulinum D str. 1873]
gi|253561236|gb|EES90688.1| ribonuclease BN [Clostridium botulinum D str. 1873]
Length = 271
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 128/265 (48%), Gaps = 2/265 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ + +++ +A+AS +S S LLS FPF++F +A + ++ +
Sbjct: 8 KTIFQLFYNLKKDEIFALASQLSYSLLLSFFPFLIFLFTIASYSSIQS--DRILFTLKNI 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + I +VL L + S + + +SNG +A+ +LN+AY E RS+
Sbjct: 66 IPQSAYTLVYSIINEVLQSRNANLLSFSFIITIWIASNGFKAVIRALNKAYGEKEERSFI 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ ++ ++ + ++ F+ V L + FF NL I R + ++ +
Sbjct: 126 KLQFMAIITTIILTFLIIFSLFILVLGNLIGYKIMTFFSLPDNLFFIWNVFRYFLMLIFM 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++ P K +LPG IF I W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 186 ILIFAVIYKLTPCRKLTFGEVLPGSIFATIGWIIVSIGFSFYVDNFANYSRLYGSIGAVI 245
Query: 250 TCLVFLYMLGVFFILGAELNASMII 274
+++L++ + ++G E+NA ++
Sbjct: 246 ILMIWLFLTSIIILIGGEINALLLK 270
>gi|172056386|ref|YP_001812846.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
gi|171988907|gb|ACB59829.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
Length = 285
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 6/273 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F E + ++ ++ +LS+FPF++F L FL V+D++
Sbjct: 3 LLKPVFARFFGEAFFDKSAQLAYYLMLSLFPFLLFVVGLVSFLPFTS--GDVLDLIRPFA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P I ++ + L +IS LAA + +S V++L SLN A V ++
Sbjct: 61 PAETYDLIRKNVVGIFDNGGLKLASISFLAAFWLASMSVQSLVRSLNDALEVTRKVPFWR 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF---PALGNLLLIIWNGRIYATML 187
L FG+ + + L + V VA L ++ F + N I + R L
Sbjct: 121 GLLQDFGFTVGMMIILPMSLLVPVAEKLTRRFITHFAIVNDVVTNYSWIWFLFRWGLGSL 180
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + I ++ LP+ + + +LPG +F I+W + F++Y F +Y +Y LA
Sbjct: 181 FLLVFFILLYRVLPSVRLTVRQVLPGALFATIAWQAVSEFFSYY-AEFGSYDRLYGQLAG 239
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ + + Y+ V +LG +NA + K
Sbjct: 240 IIVLMTWFYLSSVVLMLGGLMNAERMRQKKEAK 272
>gi|255531742|ref|YP_003092114.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
gi|255344726|gb|ACU04052.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
Length = 330
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 125/272 (45%), Gaps = 2/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVV 66
++ + + ++ AS ++ + +L++FP I+F L F+ F ++ ++
Sbjct: 34 LYTVASFFFKEIGKDSLVNKASSLAYNFMLAIFPAIIFLFTLIPFIPKRFHFQDQLMQLI 93
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + +++ +GL + L + +F++NGV L ++ N++ ++E R
Sbjct: 94 MLILPADAYNAFSATLDEIVHKQNRGLLSFGFLLSLFFATNGVHNLMMAFNKSSLIIETR 153
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW-NGRIYAT 185
+W RLI+ L ++++++ AL Y+ G+ ++ + R
Sbjct: 154 TWLKQRLIAIVLTLTIALSVIVCIIAMAIGEYALNYIDTGLDIKGDFIVYLIKLTRWSLL 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ F+ + ++ + PA K G I + F+ YI FS+Y+ +Y +
Sbjct: 214 GILYFVTISILYRYGPAHAKKWRFFSAGSWLATILAFLTIWGFSFYINNFSSYNKIYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ +++LY+ + ++G ELNAS+ +
Sbjct: 274 GTLIVIMIWLYLNSLILLIGFELNASVDLSKR 305
>gi|85714544|ref|ZP_01045531.1| hypothetical protein NB311A_20216 [Nitrobacter sp. Nb-311A]
gi|85698429|gb|EAQ36299.1| hypothetical protein NB311A_20216 [Nitrobacter sp. Nb-311A]
Length = 305
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 9/269 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ + + A+A+ ++ LL+VFP + +L G + +D +
Sbjct: 20 QILAGTYKSISADRVLAVAAGVTFYGLLAVFPAVAALVSLYGLFADPVAIKRHLDQLSWL 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + + +I +V + L F I A + ++ GV+A+ ++N AY E R
Sbjct: 80 LPGGVVQVVGGQIQRVSSAGTGTLGVSFIIGVAIAIWGANAGVKAVFDAINVAYGANEER 139
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ LIS + L A +I V +P+ L ++ GR
Sbjct: 140 SFVKLNLISLAFTLGAIAFAIIALATVVVLPVFLQCAGLDALFDA----LLRYGRWPLIW 195
Query: 187 LALFIGLIFVHLFLP--AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
LA+ I L ++ F P + K I G + W+ + +F+ Y F +++ Y
Sbjct: 196 LAIAIALSLLYRFGPTDSLDPKWRWITWGSALASLLWLAASAIFSWYAANFGSFNATYGS 255
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
L + + + ++++ + +LGAELN+ +
Sbjct: 256 LGAAIGFMTWMWISAIVIMLGAELNSEIE 284
>gi|86133182|ref|ZP_01051764.1| ribonuclease BN-like family protein [Polaribacter sp. MED152]
gi|85820045|gb|EAQ41192.1| ribonuclease BN-like family protein [Polaribacter sp. MED152]
Length = 314
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 119/273 (43%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ + VE AS I+ S +++FPF++F L ++ ++ ++
Sbjct: 35 LYDVLEMYLIGIVEGALTTRASGIAYSFFMAIFPFLLFILTLIPYVPIDGAQEGLLSIIS 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I+ ++ GL + + + + +NGV A+ +Y V E+R+
Sbjct: 95 DVLPPKTFDAVDTVIIDIINNQYGGLLSFGFIGSIFLMTNGVNAIFGGFEFSYHVKEIRN 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I+ + L+I + + L L L + L+ I R +
Sbjct: 155 IFRAYFIAMFVSFVIVAFLLITVVIIIFFELILKDYVT-LAWLEDNLIWIQLVRGSIFLA 213
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+FI + ++ + PG +FT + V+ LF Y+ F+ Y+ +Y + +
Sbjct: 214 MIFITVSMLYHYGVKEGKYSRFFSPGAVFTTVLSVLSFYLFGFYVTEFAKYNELYGSIGT 273
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ ++F+++ + +LG ELNAS+ R K
Sbjct: 274 LLILMLFIWLNAIILLLGFELNASIYSLRVRNK 306
>gi|256376128|ref|YP_003099788.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
gi|255920431|gb|ACU35942.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
Length = 306
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 99/270 (36%), Gaps = 2/270 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ F E+ A+ ++ A+LS+FP ++ L G T++D +
Sbjct: 17 WAVLKRTAAEFTEDGLMDRAAALTYYAVLSLFPGVLLLTGLLGI-LGPDAKQTLVDSLSA 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + A + A + +S V A + N Y V E R
Sbjct: 76 LGPGPARDILIQALDSLRPSVAGPVAIFGLATALWSASGYVGAFMRAANAIYEVDEGRPL 135
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + L V L +++ +V + + + +L
Sbjct: 136 WKVLPLRVLLTLGVVVLLALVAAGTALTGDVAVWVGDLVGLGREAVAVWDLAKWPVLLLL 195
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ ++ P + + I PG + + WV+ + F Y +Y Y LA
Sbjct: 196 ASAAIGLLYWASPNVRQPGWLWITPGGLLAVLLWVIASFGFGFYATHAGSYDKTYGPLAG 255
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ LV+L++ + +LGAEL+A +
Sbjct: 256 VVVFLVWLWISNIALLLGAELDAELERGRR 285
>gi|302381611|ref|YP_003817434.1| ribonuclease BN [Brevundimonas subvibrioides ATCC 15264]
gi|302192239|gb|ADK99810.1| ribonuclease BN [Brevundimonas subvibrioides ATCC 15264]
Length = 406
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 57/269 (21%), Positives = 119/269 (44%), Gaps = 12/269 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + + + +A ++ LLS+FP + + G I ++
Sbjct: 86 DIVWRVVNGYFNDQVGFVAGGVTFLMLLSLFPTLAAFVTVYGLFADPADASARIQFLYSF 145
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL----AAAYFSSNGVEALRISLNRAYRVVEM 125
P +A + E+ + LA + G T + + + + ++NGV+ L +N AY VE
Sbjct: 146 LPANVAGFLAQELTR-LAAGSTGSLTFTLIWTLALSLWTANNGVKTLFHGINVAYHEVEK 204
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + L+ F + L +++ + + V +P+ L L + + R
Sbjct: 205 RDFVQYNLLCFAFTLSGLAAVLLSAALVVGVPIFLGLF-----GLADDWERLAPLRWPML 259
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L+ ++ F P+ +++I ++PG +F V + F+ Y+ TF Y
Sbjct: 260 FAIYVLTLVTMYRFGPSRTRARIRWLVPGALFAASVSVFISFAFSWYLTTFV-RMDSYGP 318
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
LA+ M L+++++ ++GA+LNA +
Sbjct: 319 LATAMGFLLWVWLSVQVVLMGAKLNAEIE 347
>gi|210616176|ref|ZP_03290977.1| hypothetical protein CLONEX_03196 [Clostridium nexile DSM 1787]
gi|210149905|gb|EEA80914.1| hypothetical protein CLONEX_03196 [Clostridium nexile DSM 1787]
Length = 273
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 118/270 (43%), Gaps = 3/270 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + + +E + A A+ + +LS+ P I+ L + + V+
Sbjct: 2 RVLVKKVNEFLEKVGRDHVGAYAAQSAFFLVLSLIPIILLLLTLVRYTPVTK--ADVMTA 59
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V+ +P+ I + + +V + ++AL + + GV A+ LN + +E
Sbjct: 60 VYEVFPKTIRATMISIVNEVYNQSRA-VIPLTALMTMWSAGRGVLAITNGLNCIHEEIET 118
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++ R+ + Y +L + +V+ + +V + P + I R T
Sbjct: 119 RNYIFLRIRAAFYTVLFIIAIVLSLVLLGFGNSISMFVNEHVPIFRYVTDFIIEIRTVTT 178
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L L + ++ FLP K KI PG +FT W + + +F+ Y+ F +S MY L
Sbjct: 179 LLVLIVFSTCIYRFLPNHKGKIKYQFPGAVFTAFGWTLASFIFSVYMDIFKGFSNMYGSL 238
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+I+ +++LY +LG E+N + +
Sbjct: 239 TTIVLIMLWLYFCMYVMLLGGEINVLVEEH 268
>gi|197303125|ref|ZP_03168170.1| hypothetical protein RUMLAC_01849 [Ruminococcus lactaris ATCC
29176]
gi|197297780|gb|EDY32335.1| hypothetical protein RUMLAC_01849 [Ruminococcus lactaris ATCC
29176]
Length = 293
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 7/273 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + I A A+ + +LS+ P + + + + V+++V +P
Sbjct: 11 VLNMIRTVNTHHTGAYAAQAAYFFVLSLIPIFLLLITMVQYTPV--TMNDVMELVLPVFP 68
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ +A I I+QV G + L A + + GV ++ LN Y +E R+++
Sbjct: 69 DTVAPLIRSVIVQVYTKSN-GFIPFTLLVALWSAGKGVLSVTYGLNCIYDNIETRNYFYL 127
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R + Y +L + +++ + V A V + P + ++ I R T++ L
Sbjct: 128 RFRACFYTVLFLIAIMLSLVLSVFGNSLSAVVYEHIPFMSKVMNFIIRIRTCLTLVVLTF 187
Query: 192 GLIFVHLFLPAA----KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
V+ FLP K+ + LPG FT W++ + F+ Y+ F+ +++MY +
Sbjct: 188 FWDLVYKFLPNRSNRGKTTLRKQLPGAFFTASGWLLLSFFFSVYLDIFTGFTSMYGSFTT 247
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++LY +LG E+NA + K+
Sbjct: 248 IILIMLWLYGCMYIILLGGEINAILEGLGITKR 280
>gi|325289968|ref|YP_004266149.1| ribonuclease BN [Syntrophobotulus glycolicus DSM 8271]
gi|324965369|gb|ADY56148.1| ribonuclease BN [Syntrophobotulus glycolicus DSM 8271]
Length = 289
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 117/269 (43%), Gaps = 3/269 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I E + + I+ +L+ FPF++F L ++ ++D +
Sbjct: 13 WQFISLFYREITETGLLNLGAQITYYVILAFFPFLIFLLTLTSYINLADV--NILDDLSH 70
Query: 69 AWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + I D + ++++ L ++ LA+ + + NG+ AL +N AY E RS
Sbjct: 71 IVPQESYQIIADTLKEIMSVRRNTTLLSLGFLASLWSALNGIHALMTGMNSAYGKKETRS 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + + S ++++ + +V+ + V +++ L + + I +
Sbjct: 131 FLLQKFTSLNFLIVFFLAIVLSFLLLVLGRELEEFLQILLGNLNMITFLWQKLHIVFQFV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + ++++ +LPG +F I WVV ++ F+ Y+ F+ YS Y +
Sbjct: 191 FLILTFLYLNKLATGKAFTYGQLLPGSLFAAIGWVVISMGFSLYLKYFNNYSPAYGSIGG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ L++LY + G LN+ ++
Sbjct: 251 IIILLLWLYWSSEMILFGCVLNSVIMKVK 279
>gi|189183815|ref|YP_001937600.1| hypothetical protein OTT_0908 [Orientia tsutsugamushi str. Ikeda]
gi|189180586|dbj|BAG40366.1| hypothetical protein OTT_0908 [Orientia tsutsugamushi str. Ikeda]
Length = 281
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 129/275 (46%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ AI +E DG A +++ LLS+FPF++F + FLG + I
Sbjct: 2 IWRYIRCLAQAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGIA 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ P +A+ I I ++L P + L T++ + SS+ VE +R LNR ++V
Sbjct: 62 ILLSNLPANVAETIVPRIHEILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVNS 121
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+++ RL+S L+ S+ + + +FV P+ L + L I R
Sbjct: 122 PPPYWLRRLLSITQFLITSIIIFLTIVLFVFTPIILRKIPTTIVFTKTLSPIWILLRYTF 181
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L LF + ++ F+P K ++PG I T + W+ + + +S + +Y
Sbjct: 182 IVLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYGS 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L SI+ L+F +++ + FI GAE N ++ +K
Sbjct: 242 LGSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKK 276
>gi|304393249|ref|ZP_07375177.1| ribonuclease BN [Ahrensia sp. R2A130]
gi|303294256|gb|EFL88628.1| ribonuclease BN [Ahrensia sp. R2A130]
Length = 318
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 108/267 (40%), Gaps = 8/267 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ A + D + ++ + LS+FP + + G + + + +
Sbjct: 24 ILKRAFKTISSTDMSLRCAGVAFYSFLSIFPVLACFVLVYGLVADGGKLQDQMASMEEFL 83
Query: 71 PEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE + + + + +L+ P GL +S A + S G AL +++R YR + R
Sbjct: 84 PEAVQAVVYERLDALLSQPQVGLGIGLIVSFAVALWSGSRGTNALVATISRIYRETDDRG 143
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + +S L A V L A+P+A+ P + R +
Sbjct: 144 FLASAALSLSLTLGALVFLTASLLAIAAVPIAVN----LLPLPSWMETAALWVRWPLLAI 199
Query: 188 ALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
++ ++ + P + +K I G + + W+ + LF+ Y+ F YS + L+
Sbjct: 200 LVYAAILILFRLAPDREDAKWRWISLGAAVSAVLWLALSSLFSFYVKEFGNYSATFGSLS 259
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+ ++++Y + LGA LNA +
Sbjct: 260 VAVILMLWIYYSTMIVSLGAALNAEIE 286
>gi|23098330|ref|NP_691796.1| hypothetical protein OB0875 [Oceanobacillus iheyensis HTE831]
gi|22776556|dbj|BAC12831.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 274
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 3/266 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ E D + +A+ ++ LLS+FPF++F NL +L + ++ + PE
Sbjct: 9 KKFYQRIEEVDVFGLAAQLAYFFLLSLFPFLLFLLNLIAYLPID--IELIMQTIGTFAPE 66
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + I+ + L GL +IS L + +SNGV A+ + NR+Y + RS++ TR
Sbjct: 67 QVMQLISTNL-DTLTEQNTGLLSISILGTLWAASNGVNAITRAFNRSYWIDTERSFFTTR 125
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LIS + + +++ + V + YV F + I R + FI
Sbjct: 126 LISIVLTIGMVIIILLALLLPVFGRMIGLYVFSMFGFTTGFIEIWETLRWIISSAIFFIV 185
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L+F++ P + ++ G +F SW + + F+ Y+ YST Y L +++ +
Sbjct: 186 LLFLYKLAPHKRIVFSEVIWGTVFATFSWQLVSWGFSFYVNNLGNYSTTYGSLGTVIVLM 245
Query: 253 VFLYMLGVFFILGAELNASMIIYYWR 278
++ Y+ G+ I G LNA + R
Sbjct: 246 IWFYLFGIIIITGGVLNAFIQDQRKR 271
>gi|229083712|ref|ZP_04216033.1| YihY [Bacillus cereus Rock3-44]
gi|228699570|gb|EEL52234.1| YihY [Bacillus cereus Rock3-44]
Length = 207
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 91/196 (46%)
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR +S L
Sbjct: 2 NVDSVVNKQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSYITTRALSIVLTL 61
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+V V V + A V K + + R+ A+ L LF F++ F
Sbjct: 62 SIIFMIVFALIVPVFGQVIGAAVFKALGLSESFSFVWSITRLVASFLVLFALFSFLYTFA 121
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P K + ++ G +F I W+V + F Y+ F+ Y+ Y GL I+ +++ Y+
Sbjct: 122 PDRKLRRKEVVSGALFATIGWIVVSYSFAFYVDKFANYANTYGGLGGIIILMLWFYLTAW 181
Query: 261 FFILGAELNASMIIYY 276
+LG E+N + Y
Sbjct: 182 VILLGGEINGLLYSYR 197
>gi|148284876|ref|YP_001248966.1| putative ribonuclease BN [Orientia tsutsugamushi str. Boryong]
gi|146740315|emb|CAM80715.1| putative ribonuclease BN [Orientia tsutsugamushi str. Boryong]
Length = 281
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 129/275 (46%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ AI +E DG A +++ LLS+FPF++F + FLG + I
Sbjct: 2 IWRYIRCLAQAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGIA 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ P +A+ I I ++L P + L T++ + SS+ VE +R LNR ++V
Sbjct: 62 ILLSNLPANVAETIVPRIHEILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVNC 121
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+++ RL+S L+ S+ + + +FV P+ L + L I R
Sbjct: 122 PPPYWLRRLLSITQFLITSIIIFLTIVLFVFTPIILRKIPTTIVFTKTLSPIWILLRYTF 181
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L LF + ++ F+P K ++PG I T + W+ + + +S + +Y
Sbjct: 182 IVLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYGS 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L SI+ L+F +++ + FI GAE N ++ +K
Sbjct: 242 LGSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKK 276
>gi|331701997|ref|YP_004398956.1| ribonuclease BN [Lactobacillus buchneri NRRL B-30929]
gi|329129340|gb|AEB73893.1| ribonuclease BN [Lactobacillus buchneri NRRL B-30929]
Length = 299
Score = 165 bits (419), Expect = 6e-39, Method: Composition-based stats.
Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 2/279 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + V + I I+ + D A+ ++ LLS+FP ++ H +
Sbjct: 1 MKRLYEAVKNFIEIIIKRYSSGDVSDSAAVLAFYTLLSIFPIFFIVGSILNLFHIH--IT 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + +P+ I + I L ++ + + +S + A + S+N+ Y
Sbjct: 59 EVEVYLRPLFPDRIYSMLEPIINSTLQSGGASQLSVGLIVTIWSASRAIAAFQRSINKTY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V ++ RLISF ++L+ + LV++ VF + ++ G +L +I
Sbjct: 119 GVAADQTAISNRLISFVWMLVLVLALVVLMMVFAFGQMFFQWLTPILNVPGWILNLISTV 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T+ ++ L + F+P AK K + G + + ++ A FT Y+ FS
Sbjct: 179 KWPGTIAVSWLLLSLLFYFVPTAKVKFRYVWVGALIATLGLMLLAQAFTVYLKFFSQRID 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + + + + +L GV + G +NA++ K
Sbjct: 239 AYKTIGTFIVLMFWLDFSGVIMLFGGVVNATIQEIRQGK 277
>gi|332361950|gb|EGJ39752.1| ribonuclease BN [Streptococcus sanguinis SK49]
Length = 307
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 114/269 (42%), Gaps = 5/269 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + D + ++ L+SVFP ++ N+ + + + +
Sbjct: 17 QFLRAFFRFYRAADSELTSVAVAYYWLISVFPLLLIVVNILPYFNIP--IADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQFAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S + + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRVMSLVVSIGLQILFAFTLFLTMFGHMSLDFLRTYWKLDNQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ + FLP K K +LPG +F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMFYYFLPNVKINKKRYVLPGSVFVILTILALMNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMIIY 275
+ + + M+ I+GA LNAS+ Y
Sbjct: 255 IMVVMMFWFIMIAKILIVGAVLNASIQSY 283
>gi|291548889|emb|CBL25151.1| Predicted membrane protein [Ruminococcus torques L2-14]
Length = 280
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 7/281 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
E F + + A A+ + +LS+ P + + F + V
Sbjct: 2 EKFNKIKERGLRIAATVSSHHTGAFAAQAAYFFVLSLIPIFMLLLTMVQFTPVTK--ADV 59
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ V +P ++ I + QV + + ++ L A + + GV ++ LN Y
Sbjct: 60 MEAVLPVFPSTVSPMIESIVNQVYMTSSS-IIPVTILVALWSAGKGVLSVTYGLNCIYEN 118
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R+++ R + Y L V +++ + V V + P L ++ + RI
Sbjct: 119 TETRNYFYLRARACLYTFLFLVAIMLSLVLSVFGNSISVIVYEHAPFLSKVIHKVVQLRI 178
Query: 183 YATMLALFIGLIFVHLFLPAA----KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
Y T+ L V+ FLP K+ + LPG FT W+ + +F+ Y+ F +
Sbjct: 179 YFTLPLLTFFWDLVYKFLPNRGAAGKTTLRKQLPGAFFTACGWMALSFIFSIYLDIFKGF 238
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ MY +I+ +++LY +LG E+NA + + R+
Sbjct: 239 TNMYGSFTTIILVMLWLYGCMYIILLGGEINAILEGFRSRR 279
>gi|153853728|ref|ZP_01995084.1| hypothetical protein DORLON_01075 [Dorea longicatena DSM 13814]
gi|149753478|gb|EDM63409.1| hypothetical protein DORLON_01075 [Dorea longicatena DSM 13814]
Length = 274
Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++D + + ++ A A+ + +LS+ P I+ L + + V
Sbjct: 2 KKVKFLYDKVMEITGQVGKDHVGAYAAQAAYFFMLSLIPIILLLITLVQYTPVTK--ADV 59
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ V +P+ + IT + QV + G+ +++ + A + + GV AL LN Y
Sbjct: 60 MTAVLQVFPKSVDSLITSIVNQVY-NQSGGIISLTIIVALWSAGKGVLALTTGLNCVYDC 118
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R++ I R+ + Y + + ++ + + V +V + +P + + I R
Sbjct: 119 KETRNYIILRIRATFYTVAFIIVIIFLLVLSVFGNTLNLFVTEHYPLMERFVDQIMQIRG 178
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T + LF+ + ++ FLP ++ L G F+ + W++ + +F+ Y+ F +S+MY
Sbjct: 179 IITPVLLFVFTMMIYKFLPNHIVQLKVQLMGAAFSAVGWMIVSWIFSVYLNIFKGFSSMY 238
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
L +I+ +++LY +LG E+N +
Sbjct: 239 GSLTTIVLIMLWLYFCMYILLLGGEVNVIL 268
>gi|313889055|ref|ZP_07822713.1| YihY family protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312844928|gb|EFR32331.1| YihY family protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 304
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 118/269 (43%), Gaps = 7/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F I ++ D + ++ +LS+FPF++ N F G P + +
Sbjct: 14 FTFFDKLIYRVLDHDTLSYGGSLTYFLILSIFPFLISLINAINFSGI--LDPEYLYGLLD 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I + I + + ++ + TIS +A + +S V L +N++Y VE R +
Sbjct: 72 VLPGEIQEIIRNFLNELHMSSSGSFLTISFVAGLFTASTAVFKLMKIINQSYGFVESRGF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
RL++ + L + + ++ + + V + IW+ A LA
Sbjct: 132 LAQRLMALFFTLALILMIFLLVLTQIFGQIIYVKVMSYLGIENASFDKIWSIAKNAIPLA 191
Query: 189 -LFIGLIFVHLFLPAAKS----KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ I I ++ F P+ I S+LPG IF + ++ + F Y+ F YS Y
Sbjct: 192 YMLITFILLYKFSPSKSRENMITIKSVLPGSIFATLGLIIASSGFNFYVSNFGKYSITYG 251
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASM 272
L I+ L++LY+L ++GAE+N+++
Sbjct: 252 SLGGIIVFLIWLYLLSTITLVGAEINSTL 280
>gi|146301229|ref|YP_001195820.1| putative ribonuclease BN [Flavobacterium johnsoniae UW101]
gi|146155647|gb|ABQ06501.1| putative ribonuclease BN [Flavobacterium johnsoniae UW101]
Length = 307
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 120/274 (43%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ +E AS +S S +++FPF +F NL F+ F + V
Sbjct: 35 LYDLLEMYTLGILEGAFSYHASAVSFSFFMALFPFALFILNLIPFIPIDNFQEDFLQFVQ 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ P I+ I +L GL + L + + +NG+ + + V + R
Sbjct: 95 QSVPPNTYDAISKIISDILNNSHSGLLSSGFLLSIFLMANGINGILSGFESSKHVFDKRG 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ L++ L+ +V L + V + + L + + +I GR +L
Sbjct: 155 FFRQYLVALAISLVMTVILFVTVATIVVFEVFIQK-TIIQDVLSDRIPLIILGRYLFVIL 213
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ I + + +K+ I G +FT + V+ + F +++ FS Y+ +Y + +
Sbjct: 214 MILITSSILLRYGTKQYNKVPFISIGSVFTTVLIVISSFFFGIWVIKFSKYNELYGSIGT 273
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ + ++++ + +LG ELNAS+ +K+
Sbjct: 274 LLILMFYIWINCMILLLGFELNASIRKLKQKKEK 307
>gi|291525349|emb|CBK90936.1| Predicted membrane protein [Eubacterium rectale DSM 17629]
Length = 335
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 62/282 (21%), Positives = 127/282 (45%), Gaps = 7/282 (2%)
Query: 3 EYFCIVFDII---YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+ +DII +D + +F E A A + +LS FPF++F +L + +
Sbjct: 54 RKYSRRWDIIVTAFDFVTNFSESSISAYAGQAAFFLMLSFFPFLLFFFSLLSWTPLTE-- 111
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ PE + D +V A G +I+ + A Y SS + ++ L+
Sbjct: 112 ADFLMWASSFIPESFGDIMKDLASEVYA-SGTGRLSITMITAVYLSSKAFISFQLGLDDM 170
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLIIW 178
Y V E R++ + R+ S Y ++ ++ L+ + + V + Y +G+++ +
Sbjct: 171 YHVKENRNFILRRIYSVLYSIVFALALIFLLGIMVFGNMLRKMYFSNVHHIIGSIIGSVV 230
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ R+ + L + +++FLP K + LPG +F +W++ + +F+ Y+ ++ Y
Sbjct: 231 DYRLVICLPVLILFFWVIYVFLPNKKQRAKYQLPGAVFAAAAWMIFSGIFSVYVDKYNNY 290
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S+ Y + +I +V+LY +G +N + KK
Sbjct: 291 SSFYGTMTTIALIMVWLYGCMYVLFIGGIINRTWEERMEAKK 332
>gi|75909322|ref|YP_323618.1| ribonuclease BN [Anabaena variabilis ATCC 29413]
gi|75703047|gb|ABA22723.1| Ribonuclease BN [Anabaena variabilis ATCC 29413]
Length = 321
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 118/276 (42%), Gaps = 5/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFV 59
R + + + + E + S I+ +A+LS+FP I+ GF
Sbjct: 29 RFFRHLNWRTLKKTFTRTTERRLLGLGSEIAFNAMLSLFPAILAVLTAIGFFADSLQDTF 88
Query: 60 PTVIDVVFGAWPEVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + PE I + ++ GLF++S + A + +S V + ++
Sbjct: 89 RQLAAQLSQVAPEEAMVLIREFAGREIANSRNSGLFSLSFVIAIWTASGAVSTAMTAFDQ 148
Query: 119 AYRVVEM--RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+++ + R ++ ++L+S G + + LV+ SF+ L L V AL LL +
Sbjct: 149 IHQIPQEKIRPFWQSKLVSLGLTVGTILLLVLASFLVFISDLLLGMVVNKNGALIFLLHL 208
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + + F++ + + I+PG I I W + + LF Y+ F
Sbjct: 209 WQLLRWPLALGIVATAFSFIYRYGTSVWKPGTPIMPGAIIAAIFWAILSALFRLYVANFG 268
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ +Y + +++ +++L+M ++G +LN ++
Sbjct: 269 NYNKVYGAVGTVIVLMLWLWMSAAVLLIGDQLNVTV 304
>gi|332662794|ref|YP_004445582.1| ribonuclease BN [Haliscomenobacter hydrossis DSM 1100]
gi|332331608|gb|AEE48709.1| ribonuclease BN [Haliscomenobacter hydrossis DSM 1100]
Length = 344
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 116/279 (41%), Gaps = 9/279 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG---------AHQF 58
+++++ I+ D + A+ I+ S LS+FP ++ L +L F
Sbjct: 41 IYNVVKFFIQEVQRFDLFTRANSIAYSFFLSLFPSLIALFTLIPWLKRTFLHYLPEGENF 100
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + + P K + I + P L +I ++A YFSSNG+ +L S ++
Sbjct: 101 DHFLQNEIQKIMPGDAGKQLFGFIEDITNNPRIALLSIGFVSAIYFSSNGILSLLRSFDK 160
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y + + R ++ S L+ + + + + + +
Sbjct: 161 TYEDFAKWNSWKMRWVAILLTFQLSGLLIASVILVILGQSFIKTINNWLNLSFLAEQSLN 220
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R A + ++ + ++ A K PG ++ +V+F+ Y+ F+TY
Sbjct: 221 MVRWLAIIALYYVSIALIYRNGAAMIRKFKFFTPGAALASTLCLLSSVIFSMYVDMFNTY 280
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +Y + +I+ ++++ M + ++G ELNAS++I
Sbjct: 281 NRLYGSIGAIIVLMLWIQMNVMSILIGFELNASIVINKR 319
>gi|68171918|ref|ZP_00545237.1| Ribonuclease BN [Ehrlichia chaffeensis str. Sapulpa]
gi|88658113|ref|YP_507343.1| YihY family protein [Ehrlichia chaffeensis str. Arkansas]
gi|67998663|gb|EAM85396.1| Ribonuclease BN [Ehrlichia chaffeensis str. Sapulpa]
gi|88599570|gb|ABD45039.1| YihY family protein [Ehrlichia chaffeensis str. Arkansas]
Length = 274
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 16/275 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------ 54
++E + IY A+ + DG A ++S LLS+FPF+VF L +
Sbjct: 2 LKEKIKCLLKCIYYAMVDMIRHDGIEHAGYLSFIILLSIFPFLVFFMALVSNVAQLLNHY 61
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+I ++ P + + I ++++ P L T++ + + +S+ VE +R
Sbjct: 62 DISINDKLIILINDNIPHEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRT 121
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
LN+A RV S+ RL+S L+ ++T++I + +P+ + K L
Sbjct: 122 ILNKACRVSSPPSYIFRRLLSIFQFLVITLTIIIAMVCIILLPVIYEMLNKDLGYL---- 177
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + L LFI + ++ +P K +M ++PG I + W + +FT YI T
Sbjct: 178 ------KYTVSELVLFISITLLYFIVPNIKQSLMDVIPGAILVTLLWTCSSFVFTWYIKT 231
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
F + +Y LASI+ L+F Y+L +FFI GAELN
Sbjct: 232 FHQLNIIYGSLASIIASLLFFYILSIFFIYGAELN 266
>gi|295110194|emb|CBL24147.1| Predicted membrane protein [Ruminococcus obeum A2-162]
Length = 300
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+I I+ E+ A A+ + ++S PF++ L + + V+ G
Sbjct: 12 LILGFIKRMQEDHIGAYAAQAAYFLIMSFIPFVLVLTALVQYTPL--TYRMLRQVIIGFV 69
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + I +V + + + IS L A + S G+++L LN Y V E R+W
Sbjct: 70 PDNLQDFVLKIIAEVFS-KSAAVVPISGLFALWSSGKGMQSLIAGLNVIYHVKETRNWLT 128
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S Y+ L + ++ + V A + P LG ++ I + + + + LF
Sbjct: 129 NRLYSMLYMFLFIIAIITSLLLLVMGNRIHAELIVHMPLLGKVVGRILSAKTFLVFVVLF 188
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + ++ +LP K+ + S +PG ++W + + F+ Y F +S MY L++++
Sbjct: 189 LVFLVLYRYLPNRKASLKSQVPGAFIIAVAWSLFSYFFSFYFTFFPNFSNMYGSLSALIM 248
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++LY+ + GAELNA + + +
Sbjct: 249 VMLWLYVCMNLLLYGAELNAYFEKQFRQAQ 278
>gi|111219991|ref|YP_710785.1| putative tRNA processing ribonuclease [Frankia alni ACN14a]
gi|111147523|emb|CAJ59176.1| putative tRNA processing ribonuclease [Frankia alni ACN14a]
Length = 379
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 105/265 (39%), Gaps = 8/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ +AS ++ A+LS+FP + + G + + Q V I + +
Sbjct: 47 VAKRVKSQLAILSIPLIASGVAFWAILSIFPAAIAVLTVYGLVASPQTVSNQIADLSDSL 106
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVEMRS 127
+ + D + +++ GL L+ A + S+G + L ++ A+ E R
Sbjct: 107 SPSTSAVLRDWLNGIVSTNHSGLGLGLLLSLAGVLWAVSSGTQNLIKAVTVAFEQEETRG 166
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
R ++ L V V++ A L+ A G + +++ + +
Sbjct: 167 PVRLRGLAVAMSLGGVVVAVLIVGGITAGGSLLS----HHVADGTVRVVLTVVQWLVLAM 222
Query: 188 ALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ F PA + G + ++ +V +V F+ Y+ F Y+ Y L
Sbjct: 223 IVMAAVATLYRFGPAHTPANWRWASVGAVVATVALIVASVAFSFYVRAFGHYNKTYGALG 282
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
++ +++LY ++GA LNA
Sbjct: 283 GVVILMLWLYYAVTVVLIGALLNAE 307
>gi|86360754|ref|YP_472641.1| putative ribonuclease protein [Rhizobium etli CFN 42]
gi|86284856|gb|ABC93914.1| putative ribonuclease protein [Rhizobium etli CFN 42]
Length = 359
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 52/276 (18%), Positives = 124/276 (44%), Gaps = 8/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + +++ +A+ ++ LL++FP + +L G + + + +
Sbjct: 63 LRDVFWRVFHEVLDDRVTLIAAGVTFYLLLALFPALAALVSLYGLVADPITISEHLRELA 122
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + D++ ++ L F + A + + +G A+ ++N AY E
Sbjct: 123 ILLPPGAFDLLADQLKALVEKRDSTLGITFFVGLGIALWSTHSGTLAIFDAMNVAYEERE 182
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS LI + L A V V++ + +P+ L+Y+ + + ++ +
Sbjct: 183 KRSLVRLNLIGLCFTLCAVVFAVVVVALMGVMPVVLSYL--WLDQFKEHMALLLRWPLLL 240
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + + FV+ F P+ + +++ + G + T ++ ++ F+ Y+ F+ Y Y
Sbjct: 241 LVVV--VAVTFVYRFGPSREPARVRWMTWGAVLTALACAAMSLGFSFYLEHFANYDATYG 298
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +++ L+++++ V I+GAELNA + R
Sbjct: 299 TLGALIGFLIWIWLSVVILIVGAELNAELEHQTARD 334
>gi|225872705|ref|YP_002754162.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
gi|225793213|gb|ACO33303.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
Length = 279
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 109/269 (40%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
F ++ A+ ++ ++L+VFP ++ L FL ++ +
Sbjct: 7 WRSRKFARSLWREFNDDRILDGAAVLAFFSVLAVFPAMILILALLPFLSIPHLQQAILQL 66
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P A+ I + L S + + +S+GV +L LN V +
Sbjct: 67 LHQVLPAQAARLFDGTIDYLSEHKRNALLVFSVIFTLWSASSGVFSLMEQLNLICDVTDR 126
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ +R + +L + ++ + + + ++ LL R
Sbjct: 127 RPFWKSRGTAILLMLFFYLVTILSLSLVIGLGALQDWLATMLGRNWLLLGFFATLRWIVL 186
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A + + F P A+ + + PG IF + + ++ F Y+ FS+YS MY L
Sbjct: 187 AAATLLAFAVAYRFGPDARIRFRFLSPGNIFAAVMVALISIGFRFYVGHFSSYSAMYGSL 246
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A+I+ +V++Y+ G+ + G E+++ +
Sbjct: 247 AAIIILMVWMYLAGIAVLTGWEIDSLLTR 275
>gi|86606321|ref|YP_475084.1| YihY family protein [Synechococcus sp. JA-3-3Ab]
gi|86554863|gb|ABC99821.1| YihY family protein [Synechococcus sp. JA-3-3Ab]
Length = 324
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 121/282 (42%), Gaps = 18/282 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
+ + A E+ + + +AS ++ S++L++FPFI+ G + Q +++ +
Sbjct: 19 WRTLRLAWENAMRYRLFGLASEMAYSSMLALFPFILTLLTGIGLFVGSSEQAFQRLMEQL 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE-- 124
P+ + ++ +GL ++S L + +S + A+ +L+ ++ + +
Sbjct: 79 GQIAPQEALVLLERYARELRFGENRGLLSLSFLGTLWAASGALGAVMTALDLSHEIPQEM 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN------------ 172
R ++ +LIS ++L + S +F+ ++ +L
Sbjct: 139 RRPFWRRKLISMVWMLATLGLTGLASLIFLFSASFFRFLSAQAKSLAEGVAGPDQLDPWR 198
Query: 173 -LLLIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
L L +W ++ + + ++ F P+ + M I PG I + WV +
Sbjct: 199 ELALKLWEALTWPISLGMIVVSCWVLYRFGPSLRRPQMPIWPGAIVASLLWVGVSWGLRV 258
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ F + +Y + +++ L+++++ + + G ++N ++
Sbjct: 259 YVEHFGQLNQVYGAVGAVIVLLLWVWLTSLALLFGDQINIAL 300
>gi|225378186|ref|ZP_03755407.1| hypothetical protein ROSEINA2194_03846 [Roseburia inulinivorans DSM
16841]
gi|225209992|gb|EEG92346.1| hypothetical protein ROSEINA2194_03846 [Roseburia inulinivorans DSM
16841]
Length = 290
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 119/277 (42%), Gaps = 4/277 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + + + A ++ + +LS PF++ ++L + + T
Sbjct: 4 RKLIWKIIGNGKSFFDKCKRDKINAYSAQSAFFIILSTIPFLMVFSSLLQYTPITE--GT 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + A P+ I+ + I + + G+ +I+A+ A + ++ G++ + LN
Sbjct: 62 LLKMYQTALPDYISAFLIS-ITDEVYNRSVGIISITAIVAIWSAAKGIQYMTDGLNSVND 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ E R+W++ RL + Y ++ +V V V ++ P L +L +I R
Sbjct: 121 LEENRNWFVLRLWAIVYTIVFLFAVVFTLVVLVFGNTLHDLAVEYIPLLQSLTDLIVRLR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ LF+ + LP K S +PG ++W V + + Y+ F+ +S M
Sbjct: 181 GFVLFGILFVFFDIIFTMLPNKKLTFKSQIPGAAICAVAWYVFSFALSIYVDYFNGFS-M 239
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +I +++LY ++ AE+N + +
Sbjct: 240 YGSLTTIALIMLWLYFCMYIMMMSAEVNVIFNESFRK 276
>gi|296282984|ref|ZP_06860982.1| hypothetical protein CbatJ_05158 [Citromicrobium bathyomarinum
JL354]
Length = 344
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 2/278 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ +++ + + G+ A +++ A+L++FPF + GA + G I
Sbjct: 45 KYFRSYEVARRVLVGTFND-GFLYAGNLAYLAMLAIFPFFITGAAIFAAFGESSERAASI 103
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + A P V+A+ I V+ L L + + +E +R L R+Y
Sbjct: 104 NALLLAMPPVVAEVIEPVARNVIDARQGWLLWAGGLLGLWTVGSLIETIRDLLRRSYGTE 163
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
++++ RL S G ++ A + L++ V I A + +FP L + L + R
Sbjct: 164 ATQAFWRYRLASTGIIIAAVIVLMLSLIAQVMIGTAQQIIAAYFPPLSDALGKLALARFV 223
Query: 184 ATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ P + K PG + + WV V + +F +Y+ Y
Sbjct: 224 PGFGLFGSFYALFYVLTPGQYRKKRYPKWPGALAVTLWWVGVTVALPQVLRSFFSYNLTY 283
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I+ L+F +++G+ ++GA+LNA++ ++
Sbjct: 284 GSLAGIIITLLFFWLVGLGVVIGAQLNAALAETPEEER 321
>gi|225389046|ref|ZP_03758770.1| hypothetical protein CLOSTASPAR_02791 [Clostridium asparagiforme
DSM 15981]
gi|225044891|gb|EEG55137.1| hypothetical protein CLOSTASPAR_02791 [Clostridium asparagiforme
DSM 15981]
Length = 280
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 3/267 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + F ++ A+ S +++ FPFI+ + + + +++ + P
Sbjct: 8 IKQIYDKFAADEMTVYAAQASFFTIIAAFPFIMLLLTVVQIVPSVS-QGELMEFILALVP 66
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + + +++A+ A + SS G+ ++ LNR VE R + +
Sbjct: 67 VGYKSVAFRVISDLSLKSPATMISVTAVTALWSSSRGMMSIAKGLNRVQGKVEKRWYIVK 126
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RLI GY ++ + V+ + V +V + FP + + I + R +
Sbjct: 127 RLICAGYTIVFILVCVLSLGLLVFGTTIQNFVLRQFPLIARVTQHIISLRTLLALAFFMF 186
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS--TYSTMYAGLASIM 249
++ ++P K + S LPG +FT W++ ++ F+ Y F +S MY L +I+
Sbjct: 187 VFAGIYTYVPDRKLSLKSQLPGAMFTTAGWILFSMAFSLYFKLFGGSNFSYMYGSLTAIV 246
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
+++LY GAELN + I+
Sbjct: 247 LLMLWLYGCICVLFFGAELNYYLEIFR 273
>gi|284990982|ref|YP_003409536.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284064227|gb|ADB75165.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 332
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 103/275 (37%), Gaps = 10/275 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
I+ H + + A+ ++ A+LS+ P +V ++ G + + + V G
Sbjct: 37 RRILRRVAGHVLSDRLMVQAAGVAFFAVLSIAPVLVTAISVYGAVNTPEQAVQQLSGVAG 96
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + D++ + A + L + A + ++ + L L AY E
Sbjct: 97 MLPADLQSVVADQLTTITAASTQVLTWRGLTGLVVALWTATTAMTYLIDGLTLAYHETET 156
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + ++ +VL ++ L + A ALA V G + ++ A
Sbjct: 157 RGFLRRSGLALVFVLGGALLLGAVIAAAGAASRALAEV------PGPVRTVLPVVSWAAL 210
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + L ++ + P + ++ I G + W+ Y+ +Y + Y
Sbjct: 211 AALVTVVLAVLYRYAPDRREARWRWITGGSAIATLLWLATTAGLFAYVERLGSYQSTYGS 270
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA + + +L+ I+GA +NA R
Sbjct: 271 LAGVAISMFWLWTTVFLVIVGAAVNAETERQTARD 305
>gi|294499346|ref|YP_003563046.1| YihY family protein [Bacillus megaterium QM B1551]
gi|295704699|ref|YP_003597774.1| YihY family protein [Bacillus megaterium DSM 319]
gi|294349283|gb|ADE69612.1| YihY family protein [Bacillus megaterium QM B1551]
gi|294802358|gb|ADF39424.1| YihY family protein [Bacillus megaterium DSM 319]
Length = 276
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 4/258 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
F E + A+ + LLS PFI+F +L F ++ + P+
Sbjct: 6 KTVAARFFTERFFDQAAQTAYYFLLSFVPFIIFLFSLLSFFPID--TNNLLIFIEPFTPK 63
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I I + + K + + S LA + +S +++L SLN AY + +++
Sbjct: 64 SAYDVIERSI-ETVNNSGKKVLSFSLLATFWLASMAIQSLVRSLNDAYHIQRKQTFLRGL 122
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ V + I FV + + V R L L
Sbjct: 123 INDLILTFGFMVVVAISLFVPIIEEVIRHLVLTKVHVPDIWFQSWTTIRWGIGTLFLLGF 182
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
I + +P+A+ +LPG +F+ + W V + F +Y+ F +YS +Y L SI+ +
Sbjct: 183 FILFYKLMPSARVTWKDVLPGAVFSTLGWQVVSTGFGYYV-QFGSYSQIYGQLGSIIILM 241
Query: 253 VFLYMLGVFFILGAELNA 270
V+ Y+ ++G +N
Sbjct: 242 VWFYLTAAILLIGGLING 259
>gi|254451160|ref|ZP_05064597.1| ribonuclease BN [Octadecabacter antarcticus 238]
gi|198265566|gb|EDY89836.1| ribonuclease BN [Octadecabacter antarcticus 238]
Length = 275
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 119/272 (43%), Gaps = 9/272 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F+I ++ E++ +++ ++ L ++FP I +L G V + +D++ G
Sbjct: 7 FEITRQVLDDLREKNAGLISAGVAFYGLFAIFPGIAATISLFGIFADPIVVESQLDLMAG 66
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEM 125
PE + K +I +L+ + L + L A + + GV AL LN +
Sbjct: 67 LMPEGVFKLFQTQIDGLLSARSATLGVTTLLSIGLALWSARTGVAALIRGLNAIFD-RPN 125
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R L++ + ++ + V P+ LA + P + +++ R
Sbjct: 126 RGSIRHVLVALLLTICLVGIAIVALLMVVVAPIFLAVI----PFNTDQTVLLELFRWSLV 181
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ LF+GL ++ + P + +++ + PG W+ + F+ Y+ FSTY+ +Y
Sbjct: 182 IAVLFVGLGLLYRYGPNRRFARMGWVTPGAFVVVAFWLAMSAAFSTYVANFSTYNEVYGS 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L +++ L + Y+ ++GA LN ++
Sbjct: 242 LGAVIALLFWFYLSAYLILVGAALNNTLDRRK 273
>gi|260429445|ref|ZP_05783422.1| ribonuclease BN [Citreicella sp. SE45]
gi|260420068|gb|EEX13321.1| ribonuclease BN [Citreicella sp. SE45]
Length = 306
Score = 162 bits (411), Expect = 5e-38, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 117/284 (41%), Gaps = 8/284 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F ++ + E + +A+ ++ A LS+FP I + G+ +
Sbjct: 24 IKLTFGDWMSALWGTWQRMDERNLGLIAAGVAFYAFLSLFPAISAVIAIWGYWADPIVIS 83
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLN 117
+++V PE + +I ++ L IS + A + S V AL LN
Sbjct: 84 EQMELVKEVMPEEAYSLLATQISALITANRSTLQWASVISIVLAIWSSRASVAALIRGLN 143
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + ++F +L +T ++ V +P ++ F ++ L++
Sbjct: 144 AVYNTPHRENAIRRLAVAFLLTVLLVLTALVAFAAVVIVPATFVFLGLPF----HVELMV 199
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + +F + ++ + P + ++ PG + + W +G+ + T Y+ F
Sbjct: 200 SMLKWAILLAVVFFAIALLYRYGPNRRQARMRWFTPGAVLALLGWALGSWVLTTYVRNFD 259
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +Y L +++ L++ Y+ + +LGA+LN + ++
Sbjct: 260 RLNEVYGSLGAVVALLLWFYVSALVTLLGAQLNGELNKRRKIRE 303
>gi|324991565|gb|EGC23498.1| ribonuclease BN [Streptococcus sanguinis SK353]
Length = 302
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 57/277 (20%), Positives = 121/277 (43%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+++F + + + D + ++ L+SVFP ++ N+ + V
Sbjct: 7 KKFFAKIRRNQFLRAFFRFYRAADSELTSVAVAYYWLISVFPLLLIVVNILPYFHIP--V 64
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + PE + + + +VL P+ GL + S L+A + S + L+I+ N+A
Sbjct: 65 ADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKA 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y + R R++S L + + F+ + ++L ++R ++ L + +
Sbjct: 125 YGGAKSRGLISHRVMSLFVSLGLQILFALTLFLTMFGHMSLDFLRTYWKLDSQLYQHLQH 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+LF L+ ++ FLP K SK +LPG F ++ + +F+ Y+ + +
Sbjct: 185 FTEPLIYASLFAVLVMLYYFLPNVKISKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNH 244
Query: 239 STMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+SI+ + + ++ I+GA LNAS+
Sbjct: 245 LVDVRFFSSIIMVVMMFWFIIIAKILIVGAVLNASIQ 281
>gi|86608508|ref|YP_477270.1| YihY family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557050|gb|ABD02007.1| YihY family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 324
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 46/284 (16%), Positives = 124/284 (43%), Gaps = 18/284 (6%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVID 64
+V+ + A E+ + + +AS ++ S++L++FPFI+ G + Q +++
Sbjct: 29 LVWLTLRLAWENAMRYRLFGLASEMAYSSMLALFPFILTLLTGVGLFVGSSEQAFERLME 88
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P+ + + ++ +GL ++ L + +S + A+ +L+ ++ + +
Sbjct: 89 QLSQIAPQEALTLLDRYVRELRFGQNRGLLSLGFLGTLWAASGAMGAVMTALDLSHEIPQ 148
Query: 125 --MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-------------FPA 169
R ++ +LIS ++L + S +F+ L ++ +
Sbjct: 149 DRRRPFWRRKLISLVWMLATLGLTGLASLIFLFSASFLRFLYRKAGFLAQEVGGPTQLDP 208
Query: 170 LGNLLLIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L L L +W ++ + ++ F P+ + + I PG I + WV +
Sbjct: 209 LRELGLNLWGILTWPISLGLVVFSCWVLYRFGPSLRRPQIPIWPGAIVASLLWVGVSWGL 268
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y+ F ++ +Y + +++ L+++++ + + G ++N ++
Sbjct: 269 RIYVEHFGQFNQVYGAVGAVIVLLLWVWLTSLALLFGDQINIAL 312
>gi|332711504|ref|ZP_08431435.1| putative membrane protein [Lyngbya majuscula 3L]
gi|332349482|gb|EGJ29091.1| putative membrane protein [Lyngbya majuscula 3L]
Length = 350
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 61/291 (20%), Positives = 122/291 (41%), Gaps = 22/291 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--------------AHQ 57
+ + +E +++ ++ +A+L++FP I+ G +
Sbjct: 52 LRKTFKRAMERRLMGLSAEMAYNAMLALFPAILAILTAIGLFEYSLQLTWYHHPPELSEV 111
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ ++ P +PI + Q+ LF++S + A + SS + A +L+
Sbjct: 112 AQNQALKMMKEVGPAQAVQPIQEFTEQIHLSTNSSLFSLSFIIAIWVSSGALSAAMNALD 171
Query: 118 RAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + R ++ +LIS G + + + LVI SF+ L V LL
Sbjct: 172 HIHHIPREQQRPFWKAKLISLGLTIGSIILLVIASFLVFISHWVLKTVVD-TSGASILLT 230
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VT 234
+ + + F++ + P+ ILPG + ISW V + LF HY+
Sbjct: 231 LWSLLTWPVALSMVAASFAFIYRYGPSRWQLGTPILPGAVLAAISWAVASGLFRHYVTAN 290
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA----SMIIYYWRKKP 281
FS Y+ +Y + +++ ++LYM + +LG +LN +M + R +P
Sbjct: 291 FSNYNKVYGTVTAVIILQLWLYMTSLLLLLGDQLNVIVGEAMQASHRRPRP 341
>gi|88803358|ref|ZP_01118884.1| Ribonuclease BN [Polaribacter irgensii 23-P]
gi|88780924|gb|EAR12103.1| Ribonuclease BN [Polaribacter irgensii 23-P]
Length = 313
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 122/273 (44%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++DI+ VE A I+ S +++FPF++F L FL ++ ++
Sbjct: 35 LYDILEMYFIGIVEGALSTRAGGIAYSFFMAIFPFLLFVLTLIPFLPIEGAQEGLLSIIS 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + +L ++ GL + + + + SNGV A+ +Y + E R+
Sbjct: 95 DVLPPKTFDAVHAVLLDIIKNQYGGLLSFGFIGSIFLMSNGVNAIFGGFEYSYHIKEARN 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I+ ++ + +++ + + L L + L + L+ + GR ++
Sbjct: 155 IFKAYFIAMLVSVVIVIFVIVAITLIIFFDLFLLDMVS-LGWLNDNLIWLQLGRGLIFLI 213
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ + + PG +FT I ++ LF +Y+ F+ Y+ +Y + +
Sbjct: 214 MLHLTVSMLYHYGVKEGKQSGFFSPGAVFTTILSILTFYLFGYYVTEFAKYNELYGSIGT 273
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ ++F+++ + +LG ELNA++ R K
Sbjct: 274 LLILMLFIWLNAIILLLGFELNAAIYALRGRNK 306
>gi|312129376|ref|YP_003996716.1| ribonuclease bn [Leadbetterella byssophila DSM 17132]
gi|311905922|gb|ADQ16363.1| ribonuclease BN [Leadbetterella byssophila DSM 17132]
Length = 304
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 127/276 (46%), Gaps = 5/276 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+ + + + D A+ ++ S LL+VFP I+F L ++ ++D
Sbjct: 28 VYRFLQIIWNNIITFDLDQRATSVAFSFLLAVFPGILFLFTLIPYIPIDHLDIQIMDFSR 87
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE + + I ++++ P + + + Y ++NG+ +L + N A + R
Sbjct: 88 NLMPEGLYDVVAQTIYEIISRPRGDILSFGFFFSLYAATNGINSLTNAFNGALEKKKDRG 147
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR---IYA 184
+ +R + ++L LVI + +A + L Y+ + + + + IW R +
Sbjct: 148 FMRSRGTAALVLVLLVTVLVISVVILIAGKIVLNYIAR--AGILDDQINIWGIRTLGYLS 205
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ G+ ++ F PA KI G F+ + ++ LF++Y+ FS+Y+ +Y
Sbjct: 206 IFFIFYFGIACLYYFAPAMDKKIRFFNFGAFFSSVLSILATNLFSYYLENFSSYNKLYGS 265
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++ +V+ Y++ + ILG E+N + ++ K
Sbjct: 266 IGTLIAIMVWTYLICLILILGFEINVDLRAEKYKIK 301
>gi|90962240|ref|YP_536156.1| ribonuclease BN [Lactobacillus salivarius UCC118]
gi|227892347|ref|ZP_04010152.1| ribonuclease BN [Lactobacillus salivarius ATCC 11741]
gi|90821434|gb|ABE00073.1| Ribonuclease BN [Lactobacillus salivarius UCC118]
gi|227865896|gb|EEJ73317.1| ribonuclease BN [Lactobacillus salivarius ATCC 11741]
Length = 294
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 4/279 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E D+ +E E D + + I+ ALL++ P I+ N+ + +
Sbjct: 3 LKEKLHKFRDLFLLIVERASEADINSTSITIAYYALLAILPTIILLGNILSIINLKE--A 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V++ + P + + I +L + G+ ++S + A + S G+ AL+ LN AY
Sbjct: 61 DVLNGLQVIVPSNVFTTLKPIIETMLKKGSGGIASVSGILALWAVSRGINALKNGLNMAY 120
Query: 121 RVVEMRS--WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V + + R+ S ++ + +V + VF +AL Y+ N + +
Sbjct: 121 GVGKGTGTGAVLGRIFSIFITVVLGLLIVALFLVFSFGQIALDYITPLLNLSTNWIDLFM 180
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +F+ +I ++ +P AK + +LPG I I W+ + F+ Y+ F+
Sbjct: 181 RWKWPTAAIGIFVIIILIYTLIPNAKLHFILVLPGAILATIGWLGLSQGFSIYVRYFTRT 240
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y L + + L++L G +LG+ +NA + Y++
Sbjct: 241 LLSYEALGTFIVLLLWLNYTGWVIMLGSVVNAGLEYYFF 279
>gi|301299944|ref|ZP_07206172.1| YihY family protein [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852450|gb|EFK80106.1| YihY family protein [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 295
Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 4/279 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E D+ +E E D + + I+ ALL++ P I+ N+ + +
Sbjct: 4 LKEKLHKFRDLFLLIVERASEADINSTSITIAYYALLAILPTIILLGNILSIINLKE--A 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V++ + P + + I +L + G+ ++S + A + S G+ AL+ LN AY
Sbjct: 62 DVLNGLQVIVPSNVFTTLKPIIETMLKKGSGGIASVSGILALWAVSRGINALKNGLNMAY 121
Query: 121 RVVEMRS--WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V + + R+ S ++ + +V + VF +AL Y+ N + +
Sbjct: 122 GVGKGTGTGAVLGRIFSIFITVVLGLLIVALFLVFSFGQIALDYITPLLNLSTNWIDLFM 181
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +F+ +I ++ +P AK + +LPG I I W+ + F+ Y+ F+
Sbjct: 182 RWKWPTAAIGIFVIIILIYTLIPNAKLHFILVLPGAILATIGWLGLSQGFSIYVRYFTRT 241
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y L + + L++L G +LG+ +NA + Y++
Sbjct: 242 LLSYEALGTFIVLLLWLNYTGWVIMLGSVVNAGLEYYFF 280
>gi|298490493|ref|YP_003720670.1| ribonuclease BN ['Nostoc azollae' 0708]
gi|298232411|gb|ADI63547.1| ribonuclease BN ['Nostoc azollae' 0708]
Length = 291
Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 118/274 (43%), Gaps = 5/274 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQF 58
+R + + + ++ +E +AS I+ +A+LS+FP I+ G +
Sbjct: 7 IRFFRHLNWRTFQKTMDRTMEGRLLGLASEIAFNAMLSLFPAIIAVLTAIGLVAESLQNT 66
Query: 59 VPTVIDVVFGAWPEVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ PE I++ ++ +GLF++S + A + +S V + +
Sbjct: 67 FIQATMQLSQIVPEEAWSLISEFATKEIAESKNRGLFSVSFVIAIWTASGAVSTAMTAFD 126
Query: 118 RAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ ++ +R ++ +LIS G + + L++ SF+ L L + + L LL
Sbjct: 127 QIEQISPENVRPFWKAKLISLGLTIGTILLLILASFLVFISDLLLGILIRGNGYLAFLLH 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I ++ + V+ + P+ ++PG + I W + + LF Y+ F
Sbjct: 187 IWQLLLWPLALVIVAATFSLVYRYGPSLWKPGTPLMPGAVLAAIFWAIVSALFRFYVTNF 246
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
Y+ +Y + + + +++L+M ++G +LN
Sbjct: 247 GNYNKVYGTVGTFIVLMLWLWMGAFVLLVGKQLN 280
>gi|302876247|ref|YP_003844880.1| ribonuclease BN [Clostridium cellulovorans 743B]
gi|307686979|ref|ZP_07629425.1| ribonuclease BN [Clostridium cellulovorans 743B]
gi|302579104|gb|ADL53116.1| ribonuclease BN [Clostridium cellulovorans 743B]
Length = 286
Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 2/280 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + I A++ + E+ ++ASHISL+ LLS FP +VF LAG+
Sbjct: 5 IKNFIKNSIHYIILAVKRYNEDAADSLASHISLNLLLSFFPIMVFLLTLAGYSPIEG--D 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI ++ P + + I QVL L ++S L Y +S G +A+ + LN AY
Sbjct: 63 QVIALILDFIPTEAHTLMKNTIYQVLDHKNPTLLSLSLLTTMYGASRGFKAILLGLNIAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E R + + L++ + + ++ + V ++ N +I
Sbjct: 123 DVDENRGFIVRNLLAIFFTFAIVLLVIGSLLLLVLGQTIWDFIENMLDLPDNFFIIWTFI 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++I ++ A K ++ G +FT ISW V + F+ Y+ F Y+
Sbjct: 183 RYAGMFSIMYITFAILYAKSSAIKLPFKTVRYGTLFTTISWFVVSYGFSFYVDNFGNYAN 242
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y G+A + +++L ++ + G ELNA++ K+
Sbjct: 243 IYGGIAGLFIMILWLNLMSSVILFGGELNAAIYYKNPGKR 282
>gi|153956022|ref|YP_001396787.1| hypothetical protein CKL_3414 [Clostridium kluyveri DSM 555]
gi|219856362|ref|YP_002473484.1| hypothetical protein CKR_3019 [Clostridium kluyveri NBRC 12016]
gi|146348880|gb|EDK35416.1| Hypothetical protein CKL_3414 [Clostridium kluyveri DSM 555]
gi|219570086|dbj|BAH08070.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 275
Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 2/270 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F+ + I F+E+D A+AS ++ S + S FPF++F ++ G+ +
Sbjct: 8 FNGLRAFIFRFIEDDVLALASQLAYSLIFSFFPFLIFIISIIGYSDISSSNILS--SLSY 65
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + I I+++ L S + SS G ++ LN+AY E RS
Sbjct: 66 ILPENILQLIKTTIIRITDTRDIKLLFSSLALTIWSSSGGFHSVIKGLNKAYNKKESRSV 125
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
IS L +V ++I + V + +++ + R + +
Sbjct: 126 LKIYAISMVCTLGITVIIIITILLLVFGQIIGSFLAFNLGFSKEFNFMWNIFRYLMILFS 185
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
V+ + P K + ++PG F+ + V+ ++ F Y+ F++YS +Y + +
Sbjct: 186 TIFIFSAVYRYTPNVKLRWREVMPGAFFSTVGIVIASMGFAFYVNNFASYSIIYGSIGAA 245
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + +L++L V ILG E+N+ + I+ +
Sbjct: 246 IMLMTWLFILSVITILGGEINSVLFIHKSK 275
>gi|116619409|ref|YP_821565.1| putative ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
gi|116222571|gb|ABJ81280.1| putative ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
Length = 283
Score = 161 bits (409), Expect = 8e-38, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 108/271 (39%), Gaps = 8/271 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ + +++ + A + SALLS FP + A + A T+ +
Sbjct: 11 LLRRSLLNTLDDGCFGFAKGAAYSALLSFFPVLTSAATILVQTRAGFVSATLQSFLSQIV 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + +V+ GL ++ L + + +S +++L AYRV RS+
Sbjct: 71 PPGTEDLVVQQF-RVMGERPFGLLVVAGLISLWAASGVIKSLIEGFQAAYRVPRNRSFLH 129
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-------RIY 183
++ VLL++V L+ S + V V + L + W R
Sbjct: 130 QSGVAMSLVLLSAVPLICASLLLVFGNQVERAVLNWMKVDPFLNPVAWVWQFVSRMARYL 189
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + P K + + G I + W + F Y+ + Y+ MY
Sbjct: 190 LAFATTIAVTASLYYYGPYRKQRWRYVWRGAILATVLWFFATLGFAWYVRNIARYNVMYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ + + LV++Y++ + ++G E NA +
Sbjct: 250 SIGAGIALLVWMYLIALIALMGCEFNAELER 280
>gi|251782760|ref|YP_002997063.1| ribonuclease BN [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242391390|dbj|BAH81849.1| ribonuclease BN [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|323127604|gb|ADX24901.1| Ribonuclease BN [Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 318
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I + HF + + ++ +L+ FP I+ AN+ +L + ++ ++
Sbjct: 16 YEPIQVFMRHFQSAEMDLSSIAVAYYLILTAFPLIIIAANIFPYLNID--IADLLRLMKQ 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I KP + ++ + + P+ + ++ L + S + +L+ ++N+AY + R +
Sbjct: 74 NLPKDIFKPASSIVVNIFSKPSGSVLGVATLTGFWTMSRSLTSLQKAINKAYGASQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I L+ L+ L A+ + + N+ T+L
Sbjct: 134 FIGHLVGLLTSLIILFLLTFALIFSTFSKAAIQVLDNHYNLSDNITTAFLLLIQPITVLI 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+GL+ ++ LP K KI ILPG IFT + L +Y+V S
Sbjct: 194 IFVGLMLLYFLLPNVKIKKIRYILPGTIFTSFVMTFLSNLVGNYVVHNVEKMVDIKTFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMI 273
+M +++ L ILGA NA+
Sbjct: 254 VMIFIIMLWFIFLARILILGAIFNATYQ 281
>gi|325687194|gb|EGD29216.1| putative ribonuclease BN [Streptococcus sanguinis SK72]
Length = 307
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 116/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + D + ++ L+SVFP ++ N+ + + + +
Sbjct: 22 QFLRAFFRFYRAADSELTSVAVAYYWLISVFPLLLIVVNILPYFNIP--IADFLTAIKDM 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 80 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQFAFNKAYGVAKSRGLI 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + + +L
Sbjct: 140 SHRVMSLFVSLGLQILFALTLFLTMFGHMSLDFLRTYWKLDSQLYQHLQHFTEPLIYASL 199
Query: 190 FIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ ++ FLP K SK +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 200 FAVLVMLYYFLPNVKISKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 259
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + ++ I+GA LNAS+
Sbjct: 260 IMVVMMFWFIIIAKILIVGAVLNASIQ 286
>gi|300214900|gb|ADJ79316.1| Ribonuclease BN [Lactobacillus salivarius CECT 5713]
Length = 294
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 60/279 (21%), Positives = 125/279 (44%), Gaps = 4/279 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E D+ +E E D + + I+ ALL++ P I+ N+ + +
Sbjct: 3 LKEKLHKFRDLFLLIVERASEADINSTSITIAYYALLAILPTIILLGNILSIINLKE--A 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ + P + + I +L + G+ ++S + A + S G+ AL+ LN AY
Sbjct: 61 DILNGLQVIVPSNVFTTLKPIIETMLKKGSGGIASVSGILALWAVSRGINALKNGLNMAY 120
Query: 121 RVVEMRS--WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V + + R+ S ++ + +V + VF +AL Y+ N + +
Sbjct: 121 GVGKGTGTGAVLGRIFSIFITVVLGLLIVALFLVFSFGQIALDYITPLLNLSTNWIDLFM 180
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +F+ +I ++ +P AK + +LPG I I W+ + F+ Y+ F+
Sbjct: 181 RWKWPTAAIGIFVIIILIYTLIPNAKLHFILVLPGAILATIGWLGLSQGFSIYVRYFTRT 240
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y L + + L++L G +LG+ +NA + Y++
Sbjct: 241 LLSYEALGTFIVLLLWLNYTGWVIMLGSVVNAGLEYYFF 279
>gi|327474796|gb|EGF20201.1| ribonuclease BN [Streptococcus sanguinis SK408]
gi|332362522|gb|EGJ40322.1| ribonuclease BN [Streptococcus sanguinis SK1056]
Length = 302
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 121/277 (43%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+++F + + + D + ++ L+SVFP ++ N+ + V
Sbjct: 7 KKFFAKIRRNQFLRAFFRFYRAADSELTSVAVAYYWLISVFPLLLIVVNILPYFHIP--V 64
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + PE + + + +VL P+ GL + S L+A + S + L+I+ N+A
Sbjct: 65 ADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKA 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y V + R R++S L + + F+ + ++L ++R ++ L + +
Sbjct: 125 YGVAKSRGLISHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDNQLYQHLQH 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
LF L+ ++ FLP K K +LPG F +++ + +F+ Y+ + +
Sbjct: 185 FTEPLIYALLFAVLVMLYFFLPNVKINKKRYVLPGSAFVFLTILALLNIFSVYMDNYLNH 244
Query: 239 STMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+SI+ + + M+ I+GA LNAS+
Sbjct: 245 LVDVRFFSSIIMVVMMFWFIMIAKILIVGAVLNASIQ 281
>gi|322412067|gb|EFY02975.1| Ribonuclease BN [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
Length = 318
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 115/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I + HF + + ++ +L+ FP I+ AN+ +L + ++ ++
Sbjct: 16 YEPIQAFMRHFQSSEMDLSSIAVAYYLILTAFPLIIIAANIFPYLNID--IADLLRLMKQ 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I KP + ++ + + P+ + ++ L + S + +L+ ++N+AY + R +
Sbjct: 74 NLPKDIFKPASSIVVNIFSKPSGSVLGVATLTGFWTMSRSLTSLQKAINKAYGASQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I L+ L+ L A+ + + N+ T+L
Sbjct: 134 FIGHLVGLLTSLIILFLLTFALIFSTFSKAAIQVLDNHYNLSDNITTAFLLLIQPITVLI 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+GL+ ++ LP K KI ILPG IFT + L +Y+V S
Sbjct: 194 IFVGLMLLYFLLPNVKIKKIRYILPGTIFTSFVMTFLSNLVGNYVVHNVEKMVDIKTFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+M +++ L ILGA NA+ K
Sbjct: 254 VMIFIIMLWFIFLARILILGAIFNATYQEISVGK 287
>gi|291527064|emb|CBK92650.1| Predicted membrane protein [Eubacterium rectale M104/1]
Length = 320
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 62/282 (21%), Positives = 127/282 (45%), Gaps = 7/282 (2%)
Query: 3 EYFCIVFDII---YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+ +DII +D + +F E A A + +LS FPF++F +L + +
Sbjct: 39 RKYSRRWDIIVTAFDFVTNFSESSISAYAGQAAFFLMLSFFPFLLFFFSLLSWTPLTE-- 96
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ PE + D +V A G +I+ + A Y SS + ++ L+
Sbjct: 97 ADFLMWASSFIPESFGDIMKDLASEVYA-SGTGRLSITMITAVYLSSKAFISFQLGLDDM 155
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLIIW 178
Y V E R++ + R+ S Y ++ ++ L+ + + V + Y +G+++ +
Sbjct: 156 YHVKENRNFILRRIYSVLYSIVFALALIFLLGIMVFGNMLRKMYFSNVHHIIGSIIGSVV 215
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ R+ + L + +++FLP K + LPG +F +W++ + +F+ Y+ ++ Y
Sbjct: 216 DYRLVICLPVLILFFWVIYVFLPNKKQRAKYQLPGAVFAAAAWMIFSGIFSVYVDKYNNY 275
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S+ Y + +I +V+LY +G +N + KK
Sbjct: 276 SSFYGTMTTIALIMVWLYGCMYVLFIGGIINRTWEERMEAKK 317
>gi|238923938|ref|YP_002937454.1| hypothetical protein EUBREC_1576 [Eubacterium rectale ATCC 33656]
gi|238875613|gb|ACR75320.1| hypothetical protein EUBREC_1576 [Eubacterium rectale ATCC 33656]
Length = 320
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 7/282 (2%)
Query: 3 EYFCIVFDII---YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+ +DII +D + +F E A A + +LS FPF++F +L + +
Sbjct: 39 RKYSRRWDIIVTAFDFVTNFSESSISAYAGQAAFFLMLSFFPFLLFFFSLLSWTPLTE-- 96
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ PE + D +V A G +I+ + A Y SS + ++ L+
Sbjct: 97 ADFLMWASSFIPESFGDIMKDLASEVYA-SGTGRLSITMITAVYLSSKAFISFQLGLDDM 155
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLIIW 178
Y V E R++ + R+ S Y ++ ++ L+ + V V + Y +G+++ +
Sbjct: 156 YHVKENRNFILRRIYSVLYSIVFALALIFLLGVMVFGNMLRKMYFSNVHHIIGSIIGSVV 215
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ R+ + L + +++FLP K + LPG +F +W++ + +F+ Y+ ++ Y
Sbjct: 216 DYRLVICLPVLILFFWVIYVFLPNKKRRAKYQLPGAVFAAAAWMIFSGIFSVYVDKYNNY 275
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S+ Y + +I +V+LY +G +N + KK
Sbjct: 276 SSFYGTMTTIALIMVWLYGCMYVLFIGGIINRTWEERMEAKK 317
>gi|192292202|ref|YP_001992807.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
gi|192285951|gb|ACF02332.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
Length = 310
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 113/270 (41%), Gaps = 15/270 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ F + AS ++ LL P + +L G V ++ G
Sbjct: 27 IVLRVGRQFFRDGLSTAASSVAFYILLGSVPGLAAVISLYGLFADPHDVGSLSRATAGIV 86
Query: 71 PEVIAKPITDEILQVLAVPAKG--------LFTISALAAAYFSSNGVEALRISLNRAYRV 122
P IAK + +I ++ + G L I+ L + ++ G++ +LN Y
Sbjct: 87 PTDIAKLLGQQIDRLAEQDSSGSHGPSLDYLVWIALL--LWSANRGIKGFSDALNIIYNR 144
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
VE R+W + ++ + A LV + +P+ LA + P+ + + R
Sbjct: 145 VEERTWLLRTGVTLLITVGAIGFLVFTLAAVLVLPIVLAAL----PSENTIATLTGWLRW 200
Query: 183 YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + ++ + P+ K S SIL G + W+V ++ F Y + +S +
Sbjct: 201 PIMLVLTTLAIMILLRCGPSRKESHWPSILRGSLIGAALWIVVSLGFAWYAQNIANFSAL 260
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y L S++ + +L++ + ++GAE +A+
Sbjct: 261 YGSLGSVIAFMTWLWLSALAVLVGAEFDAA 290
>gi|226323653|ref|ZP_03799171.1| hypothetical protein COPCOM_01428 [Coprococcus comes ATCC 27758]
gi|225207837|gb|EEG90191.1| hypothetical protein COPCOM_01428 [Coprococcus comes ATCC 27758]
Length = 277
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 2/259 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + ++ A A+ + +LS+ P I+ + + + V+ V +P
Sbjct: 8 IREITGQVSQKHVGAYAAQSAYFFVLSMIPIILLLLAIIQYTPVTK--ADVMTAVVNLFP 65
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E + I+ + +K + I+A+ A + + GV A+ LN AY + E R++
Sbjct: 66 ETSMQDFMVGIVNEVYNQSKTVIPITAIVALWSAGKGVLAVSTGLNCAYELRETRNYVFL 125
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R+ + Y +L +V+ + V ++ P L +I R + +A+
Sbjct: 126 RIRASIYTILFIAAIVMALVLSVFGNNISIFIYHKIPFLAETTDMIMRLRTVISFVAMTG 185
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ V+ FLP K ++ G IF + W+V + +F+ Y+ F +S +Y + +I+
Sbjct: 186 ISLLVYHFLPNRKLPFRDLILGSIFCSLGWLVISFVFSMYLTIFKGFSGLYGSMTAIILV 245
Query: 252 LVFLYMLGVFFILGAELNA 270
+++LY +LG +N
Sbjct: 246 MLWLYFCMYVMLLGGLINC 264
>gi|210620881|ref|ZP_03292298.1| hypothetical protein CLOHIR_00241 [Clostridium hiranonis DSM 13275]
gi|210155093|gb|EEA86099.1| hypothetical protein CLOHIR_00241 [Clostridium hiranonis DSM 13275]
Length = 284
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 99/270 (36%), Gaps = 1/270 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M I I + A+ ++ +S+FPF++F + ++ Q +
Sbjct: 1 MERLSMIDRKKINHLFAKLNYSRLSSKAAEVAFFLTMSIFPFLMFTVSTVAYVPVLQ-IT 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+D++ P + I + +S + S V+AL +N A+
Sbjct: 60 KYVDMIEQVVPVKAIGFVDLVIKSAVEKRNTHYMIVSFCLTMWTFSRAVKALIKGMNAAF 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E RS+ +IS + L+ V + + V + + +
Sbjct: 120 YSPETRSFLKVMMISMIFTLMLLVLIFTSMILLVYGEKIGVVIFSYLGFDKVFFNLWNIT 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R +A I ++ + P + PG IF W + + L+++Y FS YS
Sbjct: 180 RYAVGTVATIIVFTLLYKYTPNINLSAKRVAPGAIFATFGWFLMSYLYSYYTNNFSNYSA 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+Y I+ L +LY ++G E+NA
Sbjct: 240 IYGSFREIIVLLTWLYFSSWVIVIGYEINA 269
>gi|159043554|ref|YP_001532348.1| putative ribonuclease BN [Dinoroseobacter shibae DFL 12]
gi|157911314|gb|ABV92747.1| putative ribonuclease BN [Dinoroseobacter shibae DFL 12]
Length = 318
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 108/256 (42%), Gaps = 9/256 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ +++ ++ LL++FP + + G + V + +V P+ + I +I
Sbjct: 38 NIGLISAGVAFYGLLAIFPALAAVIAIWGLVADPMVVDQQMALVGELMPQEAYRLIDAQI 97
Query: 83 LQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + L +S LAA + + GV AL LN Y +S + L +
Sbjct: 98 DALTQTTSSTLGWATLLSILAALWSTRAGVSALMRGLNAIYGTPNRKS-WRHYLAALSLT 156
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
+ + ++ V P+ LA++ P L + R + L GL V+ +
Sbjct: 157 AVLVLVALVALTAVVITPIVLAFL----PLGSWTELALRGTRWVVAIGVLLAGLSIVYRY 212
Query: 200 LPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
P K+ + PG I + W ++ F++Y+ F Y+ +Y + +++ L++LY+
Sbjct: 213 GPNRTCVKMQWLTPGSIAVVVLWAAASLGFSYYLSNFGNYNEVYGSIGAVIALLMWLYIS 272
Query: 259 GVFFILGAELNASMII 274
+LGA LN +
Sbjct: 273 AFLLLLGAGLNVELER 288
>gi|311742752|ref|ZP_07716561.1| YihY family protein [Aeromicrobium marinum DSM 15272]
gi|311314380|gb|EFQ84288.1| YihY family protein [Aeromicrobium marinum DSM 15272]
Length = 311
Score = 160 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 111/266 (41%), Gaps = 9/266 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I+ A + +A+ ++ A LS+FP ++ G G + + + + V
Sbjct: 4 LRSILTTAWKQASSRQASLLAAGVAFYAFLSLFPAMIAGILTYGLVVSPETLTRHTQAVG 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
A P A IT ++ + L ++ + A Y +S GV L ++N + E
Sbjct: 64 DALPADAASLITGQMESLADSSGGSLGFGLALAVVLALYSASGGVGNLVTAVNEMFGFPE 123
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS+ +L+S G A + V+ + P L + + L + + GR
Sbjct: 124 TRSFIKRKLLSLGLTAGALLFFVVTITLVAVAPAVLDALID----VPGLRIALEAGRWAM 179
Query: 185 TMLALFIGLIFVHLFLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ AL +G+ + P + + GV+ W+V ++ F+ Y+ F +Y Y
Sbjct: 180 LLGALVVGVGVLFRLAPDRTDEQATPLVNRGVVVAAALWLVVSLGFSLYVDNFGSYGETY 239
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
LA ++ L++L+ +LGA +
Sbjct: 240 GALAGVVILLLWLWAGLFAMLLGASI 265
>gi|254975207|ref|ZP_05271679.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-66c26]
gi|255092597|ref|ZP_05322075.1| putative membrane-associated ribonuclease [Clostridium difficile
CIP 107932]
gi|255100703|ref|ZP_05329680.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-63q42]
gi|255306592|ref|ZP_05350763.1| putative membrane-associated ribonuclease [Clostridium difficile
ATCC 43255]
gi|255314334|ref|ZP_05355917.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-76w55]
gi|255517013|ref|ZP_05384689.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-97b34]
gi|255650115|ref|ZP_05397017.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-37x79]
gi|260683242|ref|YP_003214527.1| putative membrane-associated ribonuclease [Clostridium difficile
CD196]
gi|260686838|ref|YP_003217971.1| putative membrane-associated ribonuclease [Clostridium difficile
R20291]
gi|306520120|ref|ZP_07406467.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-32g58]
gi|260209405|emb|CBA62875.1| putative membrane-associated ribonuclease [Clostridium difficile
CD196]
gi|260212854|emb|CBE04061.1| putative membrane-associated ribonuclease [Clostridium difficile
R20291]
Length = 279
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 115/276 (41%), Gaps = 1/276 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F I +I I + + ++ +S +LS+FPF++F + ++ I
Sbjct: 2 FGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHL-NKYIA 60
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ PE ++ I+ + +S + + S V+AL +NRAY+V E
Sbjct: 61 LFRNMMPEGAFAVLSSIIVSAIDNRNLKFLAVSFVLTMWTFSRAVKALIKGMNRAYKVKE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS++ ISF + ++ V + + V ++ + I R
Sbjct: 121 TRSFFKILSISFLFTIMLLVLIFLSMIFLVYGEKIGYFIFNLVGLDEIFIKIWDILRYTV 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + ++ + P K I PG IF +W + + L+++Y ++ Y +Y
Sbjct: 181 GIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYYANYEVIYGS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+A I+ + ++Y ++G E+N+ + R +
Sbjct: 241 IAEIIVLMTWMYFSSWSIVIGYEVNSRLYFRKIRHE 276
>gi|126699181|ref|YP_001088078.1| putative membrane-associated ribonuclease [Clostridium difficile
630]
gi|115250618|emb|CAJ68442.1| putative membrane-associated ribonuclease BN-like (Rbn)
[Clostridium difficile]
Length = 279
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 115/276 (41%), Gaps = 1/276 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F I +I I + + ++ +S +LS+FPF++F + ++ I
Sbjct: 2 FGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHL-NKYIA 60
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ PE ++ I+ + +S + + S V+A+ +NRAY+V E
Sbjct: 61 LFRNMMPEGAFAVLSSIIVSAIDNRNLKFLAVSFVLTMWTFSRAVKAIIKGMNRAYKVKE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS++ ISF + ++ V + + V ++ + I R
Sbjct: 121 TRSFFKILSISFLFTIMLLVLIFLSMIFLVYGEKIGYFIFNLVGLDEIFIKIWDILRYTV 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + ++ + P K I PG IF +W + + L+++Y ++ Y +Y
Sbjct: 181 GIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYYANYEVIYGS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+A I+ + ++Y ++G E+N+ + R +
Sbjct: 241 IAEIIVLMTWMYFSSWSIVIGYEVNSRLYFRKIRHE 276
>gi|310816214|ref|YP_003964178.1| ribonuclease BN [Ketogulonicigenium vulgare Y25]
gi|308754949|gb|ADO42878.1| ribonuclease BN [Ketogulonicigenium vulgare Y25]
Length = 288
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 113/278 (40%), Gaps = 10/278 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ I+D E +A+ ++ + +FP + L G L V +
Sbjct: 12 IRYAYIFIWDVWNRGAAERVGLIAAGVAFWGVFGLFPALTALIALFGLLADPMVVQNQLI 71
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYR 121
+ P + + D++ +++ + L + + A + + GV AL LN
Sbjct: 72 LAHDFLPPGAYELVADQVTRLVEPGPRTLGWATIVSTGVALWSARAGVGALAEGLNAVQG 131
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + +L ++ +V ++ V + + + + + F GN+ ++ R
Sbjct: 132 TGSRNGF-----VHIMVAMLMTIAMVGITMVGLLVTILVPIIVLIFQPPGNVATLLEFMR 186
Query: 182 IYATMLALFIGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ I L ++ + P+ + + I PG + + W+ + LF+ Y+ F Y+
Sbjct: 187 WVVMLTSVLIALGLLYRYGPSRRRGLRFSWITPGSVIVLVLWLGVSYLFSLYVGNFGNYN 246
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+Y + +++ +++LY+ +LG LNA +
Sbjct: 247 EVYGSIGAVIALMMWLYISAFLVLLGGALNAEIAARRG 284
>gi|113474045|ref|YP_720106.1| putative ribonuclease BN [Trichodesmium erythraeum IMS101]
gi|110165093|gb|ABG49633.1| putative ribonuclease BN [Trichodesmium erythraeum IMS101]
Length = 371
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 54/306 (17%), Positives = 127/306 (41%), Gaps = 29/306 (9%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ F I + ++ +++ ++ SA+L++FP ++ G + + +
Sbjct: 64 ILHLNFTTIKEVFNCVAKKRLSGLSAEMAYSAMLALFPALLTIIAAIGVFESLSSILFQM 123
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ P + I+ + ++ P K +F+ S + + + S+ + + +L+ ++V
Sbjct: 124 GSLLIDIVPNQVQDLISSAVYEIQRSPNKKIFSFSFILSIWLFSSVLSSAMAALDEIHQV 183
Query: 123 V--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--------- 171
+ R ++ +L+S G + + L+I S + + L + + + L
Sbjct: 184 PLDKKRPFWKAKLVSLGLTIGTLILLIIASGLVLVSDLIVYMISRQSCLLEILPNCPSDQ 243
Query: 172 -----------------NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
LL R T+ + I FV+ F P+ + K I+PG
Sbjct: 244 VASCLFQKPINNCVLKLRLLETWNQLRWPITLGIVSIAFAFVYRFGPSYRRKGTPIIPGA 303
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
I + W + LF Y+ F Y+ +Y + + + L++LY+ ++G++LN ++
Sbjct: 304 IIAALMWAAASNLFRLYVFYFGNYNRIYGAIGTFIILLLWLYISSFVVLIGSQLNVTVGE 363
Query: 275 YYWRKK 280
R +
Sbjct: 364 VMARDR 369
>gi|88854744|ref|ZP_01129410.1| membrane protein [marine actinobacterium PHSC20C1]
gi|88815905|gb|EAR25761.1| membrane protein [marine actinobacterium PHSC20C1]
Length = 336
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 100/269 (37%), Gaps = 3/269 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGAW 70
A F+ G A+ ++ + L++FP + + G Q V TV+D+
Sbjct: 19 FRRAWHGFLRHRGIDTAATLTFFSALAIFPAALTVVSAFALGQGRIQAVETVLDLAEEIL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + Q+ ++ + G+ I + + + S+ A + N Y V E R
Sbjct: 79 QPDTVDVLEVPLAQLFSIGSPGIALAIGIVLSVWSMSSYATAFGRAANSVYEVHEGRRLV 138
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R + + + + + + P + + + + GR L
Sbjct: 139 KFRGLMLILSVFLIIAFAAVIALLLTTPNVATAIGEALGFGEPWVAVWSYGRWPVLAAIL 198
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ F P + ++ + G +F +W + F Y+ T + Y +Y L
Sbjct: 199 TLIIAVLYYFTPNIRHERMRWVSTGAVFAIATWGLATAAFGLYVSTIANYDRVYGWLGGA 258
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++LY+ + + G E++A
Sbjct: 259 LALLIWLYISNLALVAGIEVDAEFTRLRQ 287
>gi|254485604|ref|ZP_05098809.1| ribonuclease BN [Roseobacter sp. GAI101]
gi|214042473|gb|EEB83111.1| ribonuclease BN [Roseobacter sp. GAI101]
Length = 303
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 123/276 (44%), Gaps = 9/276 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
E + + + I +++ +A+ ++ A+LS+FP + + + V
Sbjct: 2 EIIQLYWVSLRACIADIGQKNVALIAAGVAFYAMLSLFPALAALVAILSLVSDPVVVIAQ 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRA 119
++ + G P + I +++ ++ ++ L T+S L A + + GV A+ I LN
Sbjct: 62 LEDMRGLMPNDVYDIINGQVVSMVTTSSETLGWAGTVSLLVALWSARAGVGAMMIGLNSV 121
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y R+ L + + +I V P+ L++V G+++ +
Sbjct: 122 YNER-NRNAAFHYLRALLLTFGLVMVGIIALITVVIAPIVLSFVP--LGIFGSIVAEV-- 176
Query: 180 GRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R + L GL ++ + P + +++ + G +F +W V ++ F++Y+ F Y
Sbjct: 177 TRWTIAISVLLAGLGVLYRYGPNRRPARVGWLTFGAVFAVAAWAVVSIGFSYYVANFGNY 236
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ +Y + +++ LV+L++ ++GA NA + +
Sbjct: 237 NQVYGSIGAVIAMLVWLWISSFLVLMGASWNAQVEL 272
>gi|94990668|ref|YP_598768.1| ribonuclease BN [Streptococcus pyogenes MGAS10270]
gi|94544176|gb|ABF34224.1| Ribonuclease BN [Streptococcus pyogenes MGAS10270]
Length = 321
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I + H + A ++ +L+ FP IV AN+ +L + ++ ++
Sbjct: 16 YEPIQVFMRHLQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRLMKQ 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY + R +
Sbjct: 74 NLPKDIFRPTSAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I L+ L+ L A+ + K + N+ I T+L
Sbjct: 134 FIGHLVGLLTSLIILFLLAFALIFSTFSKAAIQVLDKHYHLSDNITTIFLLLIQPITVLI 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+GL+ ++ LP K KI ILPG +FT + L +Y+V S
Sbjct: 194 IFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVDIKMFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMI 273
+M +++ L ILGA NA+
Sbjct: 254 VMIFIIMLWFIFLARILILGAIFNATYQ 281
>gi|15675286|ref|NP_269460.1| hypothetical protein SPy_1353 [Streptococcus pyogenes M1 GAS]
gi|71910915|ref|YP_282465.1| ribonuclease BN [Streptococcus pyogenes MGAS5005]
gi|13622462|gb|AAK34181.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71853697|gb|AAZ51720.1| ribonuclease BN [Streptococcus pyogenes MGAS5005]
Length = 321
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 115/268 (42%), Gaps = 5/268 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I + H + A ++ +L+ FP IV AN+ +L + ++ ++
Sbjct: 16 YEPIQVFMRHLQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRLMKQ 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY + R +
Sbjct: 74 NLPKDIFRPASAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I L+ L+ L + A+ + K + N+ I T+L
Sbjct: 134 FIGHLVGLLTSLIILFLLAFALIFSIFSKAAIQVLDKHYHLSDNITTIFLLLIQPITVLI 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+GL+ ++ LP K KI ILPG +FT + L +Y+V S
Sbjct: 194 IFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVDIKMFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMI 273
+M +++ L ILGA NA+
Sbjct: 254 VMIFIIMLWFIFLARILILGAIFNATYQ 281
>gi|19746326|ref|NP_607462.1| hypothetical protein spyM18_1365 [Streptococcus pyogenes MGAS8232]
gi|21910564|ref|NP_664832.1| hypothetical protein SpyM3_1028 [Streptococcus pyogenes MGAS315]
gi|28895744|ref|NP_802094.1| hypothetical protein SPs0832 [Streptococcus pyogenes SSI-1]
gi|50914420|ref|YP_060392.1| ribonuclease BN [Streptococcus pyogenes MGAS10394]
gi|56808457|ref|ZP_00366201.1| COG1295: Predicted membrane protein [Streptococcus pyogenes M49
591]
gi|71903759|ref|YP_280562.1| ribonuclease BN [Streptococcus pyogenes MGAS6180]
gi|94988776|ref|YP_596877.1| ribonuclease BN [Streptococcus pyogenes MGAS9429]
gi|94992661|ref|YP_600760.1| ribonuclease BN [Streptococcus pyogenes MGAS2096]
gi|139473605|ref|YP_001128321.1| ribonuclease BN-like family protein [Streptococcus pyogenes str.
Manfredo]
gi|209559593|ref|YP_002286065.1| Ribonuclease BN [Streptococcus pyogenes NZ131]
gi|306827129|ref|ZP_07460421.1| YihY family protein [Streptococcus pyogenes ATCC 10782]
gi|19748519|gb|AAL97961.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|21904764|gb|AAM79635.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28810993|dbj|BAC63927.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|50903494|gb|AAT87209.1| Ribonuclease BN [Streptococcus pyogenes MGAS10394]
gi|71802854|gb|AAX72207.1| ribonuclease BN [Streptococcus pyogenes MGAS6180]
gi|94542284|gb|ABF32333.1| ribonuclease BN [Streptococcus pyogenes MGAS9429]
gi|94546169|gb|ABF36216.1| Ribonuclease BN [Streptococcus pyogenes MGAS2096]
gi|134271852|emb|CAM30087.1| ribonuclease BN-like family protein [Streptococcus pyogenes str.
Manfredo]
gi|209540794|gb|ACI61370.1| Ribonuclease BN [Streptococcus pyogenes NZ131]
gi|304430682|gb|EFM33699.1| YihY family protein [Streptococcus pyogenes ATCC 10782]
Length = 321
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I + H + A ++ +L+ FP IV AN+ +L + ++ ++
Sbjct: 16 YEPIQVFMRHLQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRLMKQ 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY + R +
Sbjct: 74 NLPKDIFRPASAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I L+ L+ L A+ + K + N+ I T+L
Sbjct: 134 FIGHLVGLLTSLIILFLLAFALIFSTFSKAAIQVLDKHYHLSDNITTIFLLLIQPITVLI 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+GL+ ++ LP K KI ILPG +FT + L +Y+V S
Sbjct: 194 IFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVDIKMFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMI 273
+M +++ L ILGA NA+
Sbjct: 254 VMIFIIMLWFIFLARILILGAIFNATYQ 281
>gi|256424888|ref|YP_003125541.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
gi|256039796|gb|ACU63340.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
Length = 323
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 2/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D+I ++ + A+ IS + LL++ PF +F L ++ T+ ++
Sbjct: 35 LYDVIKFFLKEMRNQSLGERAAAISFNFLLAIPPFFIFLFTLVPYIPMQNVEATLYELAE 94
Query: 68 GAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I D I L GL +++ + + SSN V + S N+ R
Sbjct: 95 DVTPNYNTYIIIRDMIHDFLYTHHNGLLSLAFIMGFFTSSNAVMGIARSFNKKLPGFRRR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYAT 185
W+ RL++ L+ + L++ + +A L Y+ + +L + + R
Sbjct: 155 KWWQKRLMALKLTLILIILLLLTIILIIAQGTVLGYIFNYLGITDKRILSLADVARWILI 214
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L F L ++ F+PA K I G F I ++ +LF++++ F Y+ +Y +
Sbjct: 215 GLLFFSMLSVIYRFVPATVKKWKFITAGSTFAAILMILVTILFSYFVNNFGNYNKIYGSV 274
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+I+ ++ +Y ++G ELNAS+ I
Sbjct: 275 GTILILMLSVYFYSFILLIGFELNASIRILKE 306
>gi|167748842|ref|ZP_02420969.1| hypothetical protein ANACAC_03616 [Anaerostipes caccae DSM 14662]
gi|167651812|gb|EDR95941.1| hypothetical protein ANACAC_03616 [Anaerostipes caccae DSM 14662]
Length = 271
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 2/267 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ I ++ A ++ + +LS FPF++ +L F+ +I +V
Sbjct: 7 LLNSVIAKAQKDHITAFSAQAAFFTVLSFFPFLIVVLSLMRFVPVTP--KDLIGLVNYYL 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + + I + + + + + +S G+ ++ LN + + E R++++
Sbjct: 65 PEQYSVSLVAVINSLYGKITTTYMSFTIITLLWSASKGILSMMTGLNTIHEIPEKRNYFV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R IS Y+ +V ++I V + L + +F+P L N +I R F
Sbjct: 125 LRFISTMYIAFIAVAVLIGIIVLLFGNTLLNQLYQFYPFLSNQHIIFLLIRFGIAFFIFF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ FLP+ K ++PGVIF+ W++ + LF+ Y F +S MY GL I+
Sbjct: 185 LVFFIMYRFLPSEHFKARQVMPGVIFSSAGWIILSSLFSIYFDNFKFFSIMYGGLTGILL 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
L +LY + +GAELN ++ +
Sbjct: 245 TLFWLYFCMMILFIGAELNQYIMKNHK 271
>gi|322516266|ref|ZP_08069196.1| YihY family protein [Streptococcus vestibularis ATCC 49124]
gi|322125239|gb|EFX96612.1| YihY family protein [Streptococcus vestibularis ATCC 49124]
Length = 319
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 115/275 (41%), Gaps = 5/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + + H+ + + ++ +L+VFP IV AN+ +L ++
Sbjct: 13 KLQWRPLQLYLRHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYLNID--TTDLLKF 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ P + + + + P+ L +++L + + +L+ ++N+ Y E
Sbjct: 71 MNEHLPKQFYAPAANVVQDIFSTPSGQLLGVASLTGFWTMIKSLSSLQKAINKVYGASEH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +I+ ++ L+ L + I L + + +P + +I N +
Sbjct: 131 RDVFISHIVGGFMSLVILFLLTFALMLSTIIQSVLRVITQTYPIGSKMTQLILNSIQPLS 190
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F+G++ ++ LP K KI ++PG IFT + + LF Y++ +
Sbjct: 191 IAVVFLGMMVLYFVLPNVKIRKIRYVMPGTIFTTLVIGYLSNLFGTYVIRTLSRLVDIKL 250
Query: 245 LASIMT--CLVFLYMLGVFFILGAELNASMIIYYW 277
SIM +++ L ILGA NA+
Sbjct: 251 FGSIMIFVFMLWFIFLARILILGAVFNATYQELKQ 285
>gi|255655600|ref|ZP_05401009.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-23m63]
gi|296451602|ref|ZP_06893336.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP08]
gi|296878848|ref|ZP_06902848.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP07]
gi|296259520|gb|EFH06381.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP08]
gi|296430120|gb|EFH15967.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP07]
Length = 279
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 115/276 (41%), Gaps = 1/276 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F I +I I + + ++ +S +LS+FPF++F + ++ I
Sbjct: 2 FGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHL-NKYIA 60
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ PE ++ I+ + +S + + S V+AL +NRAY+V E
Sbjct: 61 LFRNMMPEGAFAVLSSIIVSAIDNRNLKFLAVSFVLTMWTFSRAVKALIKGMNRAYKVKE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS++ ISF + ++ V + + V ++ + I R
Sbjct: 121 TRSFFKILSISFLFTIMLLVLIFLSMIFLVYGEKIGYFIFNLIGLDEIFIKIWDILRYTV 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + ++ + P K I PG IF +W + + L+++Y ++ Y +Y
Sbjct: 181 GIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYYANYEVIYGS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+A I+ + ++Y ++G E+N+ + + +
Sbjct: 241 IAEIIVLMTWMYFSSWSIVIGYEVNSRLYFRKIKHE 276
>gi|149175144|ref|ZP_01853767.1| hypothetical protein PM8797T_25731 [Planctomyces maris DSM 8797]
gi|148846122|gb|EDL60462.1| hypothetical protein PM8797T_25731 [Planctomyces maris DSM 8797]
Length = 301
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 102/267 (38%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D+I ++ + + A ++ + ++ + FP ++ L + +V + +
Sbjct: 25 LWDLIVRTLKGYDKHHLSAHSAQFAYYSIFTFFPLLIVIIGCLAQLPIRGVILSVENAIN 84
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ + +I + L A+ + + + L+ + V RS
Sbjct: 85 QGLPSNVSSMLFAQIEDIQQKTTLSLIGGGIFLLAWGGTRLFITMEVGLDSVFEVEHRRS 144
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + ++ + L+ S + V P + + + LL R
Sbjct: 145 FLRSGGLALLLTFGVLILLLTASILLVVGPEIASLLVANIHSTWIHLLFSAGARWSVACG 204
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ I ++ +P+ K PG +F ISWV+ F Y+ F+ Y+ Y +
Sbjct: 205 FMLISTSVIYWAVPSIKLPWKIFTPGSMFVIISWVLMLQGFRLYVENFAHYNETYGTIGG 264
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
+ LV+LY+ G + G E+N +
Sbjct: 265 FIVLLVWLYLTGAILMTGGEINGVIYR 291
>gi|326803368|ref|YP_004321186.1| YihY family protein [Aerococcus urinae ACS-120-V-Col10a]
gi|326651129|gb|AEA01312.1| YihY family protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 320
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 116/262 (44%), Gaps = 2/262 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A + + + A+ ++ ALL++FP ++ AN+ L ++ + P I
Sbjct: 12 ASQSVQDASIGSSAAELAYYALLAIFPMLLLVANIIPLLPFDS--AQAVEWITAILPNEI 69
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + L + G +I+ + + SS G AL+ LNR Y + ++ ITR+
Sbjct: 70 EPLLIPTLKSYLDSTSAGSLSINTILVIWSSSAGFSALQRVLNRVYGNPDHKNAVITRIA 129
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
SF L +++ + S FV L + F P + + ++ + ++++FI ++
Sbjct: 130 SFLIAFLLVLSVGVFSLFFVFGETLLQIINNFVPLPLDFVELLLGLKWPVLLVSVFILML 189
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F+++ +P + LPG + I ++ + LF Y+ S + + +++
Sbjct: 190 FIYIVVPNQPMTLKYALPGSVTAAIIVLLISSLFGVYVQFAGGSSVQNGTIGVFIALMLY 249
Query: 255 LYMLGVFFILGAELNASMIIYY 276
LY+ G+ I+G +N Y
Sbjct: 250 LYLNGMALIVGGLVNTIYYRYK 271
>gi|58617238|ref|YP_196437.1| hypothetical protein ERGA_CDS_05110 [Ehrlichia ruminantium str.
Gardel]
gi|58416850|emb|CAI27963.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 277
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 16/275 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------ 54
+ + +F Y A+ +E DG A ++S LLSVFPF+VF L L
Sbjct: 2 LAKKIRCIFKCSYYAVVDMIEHDGIEHAGYLSFVILLSVFPFLVFFMALMSNLAQLLHYY 61
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+I ++ P + + I ++++ P L T++ + + +S+ VE +R
Sbjct: 62 DISVSDKLIILITDNIPSEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRT 121
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
LN+A RV S+ RL+S + ++ + I + +P+ + K
Sbjct: 122 ILNKACRVSSPPSYIFRRLLSIFQFISITLAMTIAMICIIVLPVIYEMLNKNLGYF---- 177
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + L LF+ + ++ +P K + +++PG + W +++FT Y+ T
Sbjct: 178 ------KYAVSELVLFVSITLLYFIIPNVKQNLANVIPGAVLVTFLWTCSSLIFTWYLKT 231
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
F + +Y LASI+ L+F Y+L +FFI GAE N
Sbjct: 232 FHQLNIIYGSLASIIASLLFFYILSIFFIYGAEFN 266
>gi|94994597|ref|YP_602695.1| ribonuclease BN [Streptococcus pyogenes MGAS10750]
gi|94548105|gb|ABF38151.1| Ribonuclease BN [Streptococcus pyogenes MGAS10750]
Length = 321
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I + H + A ++ +L+ FP IV AN+ +L + ++ ++
Sbjct: 16 YEPIQVFMRHLQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRLMKQ 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY + R +
Sbjct: 74 NLPKDIFRPASAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I L+ L+ L A+ + K + N+ I T+L
Sbjct: 134 FIGHLVGLLTSLIILFLLAFALIFSTFSKAAIQVLDKHYHLSDNITTIFLLLIQPITVLI 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+GL+ ++ LP K KI ILPG +FT + L +Y+V S
Sbjct: 194 IFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVDIKMFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMI 273
+M +++ L ILGA NA+
Sbjct: 254 VMIFIIMLWFIFLARILILGAIFNATYQ 281
>gi|57239224|ref|YP_180360.1| hypothetical protein Erum4970 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161303|emb|CAH58226.1| putative tRNA processing ribonuclease BN [Ehrlichia ruminantium
str. Welgevonden]
Length = 277
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 16/275 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------ 54
+ + +F Y A+ +E DG A ++S LLSVFPF+VF L L
Sbjct: 2 LAKKIRCIFKCSYYAVVDMIEHDGIEHAGYLSFVILLSVFPFLVFFMALMSNLAQLLHYY 61
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+I ++ P + + I ++++ P L T++ + + +S+ VE +R
Sbjct: 62 DISVSDKLIILITDNIPSEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRT 121
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
LN+A RV S+ RL+S + ++ + I + +P+ + K
Sbjct: 122 ILNKACRVSSPPSYIFRRLLSIFQFISITLAMTIAMICIIVLPVIYEMLNKNLGYF---- 177
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + L LF+ + ++ +P K + +++PG + W +++FT Y+ T
Sbjct: 178 ------KYAVSELVLFVSITLLYFIIPNVKQNLANVVPGAVLVTFLWTCSSLIFTWYLKT 231
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
F + +Y LASI+ L+F Y+L +FFI GAE N
Sbjct: 232 FHQLNIIYGSLASIIASLLFFYILSIFFIYGAEFN 266
>gi|89056049|ref|YP_511500.1| ribonuclease BN, putative [Jannaschia sp. CCS1]
gi|88865598|gb|ABD56475.1| ribonuclease BN putative [Jannaschia sp. CCS1]
Length = 325
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 111/276 (40%), Gaps = 8/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
D+ ++ + +A+ I+ +L++FP + L G + +
Sbjct: 26 FLDVGLRVVKRVGRDQLSLIAAGIAFFGMLALFPALAALVALGGAFVDPVQIVEGAEAYL 85
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYRVVE 124
A P + + +++++ + + L + +A A Y SS G+ L LN AY E
Sbjct: 86 SALPIAAREIVQGQMVELASADSDTLSLAAMIAFGIAIYSSSRGMANLVSGLNVAYEEEE 145
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + +L + A + ++ +PLA + + L + LI+ R
Sbjct: 146 ERGFLALQLRITALTVFALIVGLLSLGALAVLPLATELIFR-SELLTQVALIL---RWPL 201
Query: 185 TMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + ++ F P+ + K I PG + + WV F Y+ F Y+ +
Sbjct: 202 LLGFASVAFTIIYRFGPSRRQAKWRWIAPGGVLAVLIWVTATFGFAWYVQAFGAYNETFG 261
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA ++ L++L++ +LGA L+A M +
Sbjct: 262 TLAGVIVLLMWLWLSAFSILLGATLDAEMEAQTGKD 297
>gi|325262470|ref|ZP_08129207.1| ribonuclease BN [Clostridium sp. D5]
gi|324032302|gb|EGB93580.1| ribonuclease BN [Clostridium sp. D5]
Length = 282
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 107/228 (46%), Gaps = 5/228 (2%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
V+ V +P + I+ + QV + + ++ + A + + GV ++
Sbjct: 54 PVTRQDVMAAVTQVFPTTVEGLISSIVDQVY-QQSSTIIPVTIIVALWSAGKGVLSMTSG 112
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+N Y E R+++ RL + Y ++ + +V+ + V +V K P L ++
Sbjct: 113 MNLIYENTETRNYFYLRLRASFYTVIFILAIVLSLSLSVFGNSISMFVYKHAPVLTTIMD 172
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAA----KSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ R T++ L + V+ +LP K+ + LPG +FT W++ + +F+ Y
Sbjct: 173 FLIRIRTLLTLVVLTLFWDLVYKYLPNRTNRSKTTMKQQLPGAVFTSCGWLLISFIFSIY 232
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ F+ +S+MY L +I+ +++LY+ +LG ELNA + R+
Sbjct: 233 LDIFTGFSSMYGSLTTIILIMLWLYVCMYVILLGGELNALLEGMGGRR 280
>gi|114762132|ref|ZP_01441600.1| Ribonuclease BN family protein [Pelagibaca bermudensis HTCC2601]
gi|114545156|gb|EAU48159.1| Ribonuclease BN family protein [Roseovarius sp. HTCC2601]
Length = 299
Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 113/274 (41%), Gaps = 8/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ + E + +++ ++ A LS+FP I + G+ + ++++
Sbjct: 25 LHALWGTWQRMDERNLGLISAGVAFYAFLSLFPAISAVIAIWGYWADPVAISEQMELLRE 84
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
PE + +I Q+++ L IS + A + S + AL LN
Sbjct: 85 MMPEQAYVLLETQITQLISANRSTLQWASIISIVVALWSSRASIAALIRGLNAVSEAPHR 144
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ ++F +L T ++ V +P A+A++ ++ + + +
Sbjct: 145 ENAIRRIAVAFLLTVLLVFTALVAFAAVVILPAAIAFIG----LPMHVEIAVSLVKWLIL 200
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F + ++ + P + ++ PG + +SW G+V T Y+ + +Y
Sbjct: 201 LAVVFFAIALLYRYGPNRRSRRMRWFTPGALLALLSWAAGSVALTIYMRNVDRLNEVYGS 260
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L +++ L++ Y+ + +LGA+LN + +
Sbjct: 261 LGAVVALLLWFYVSALVTLLGAQLNGELDKRRKK 294
>gi|58579184|ref|YP_197396.1| hypothetical protein ERWE_CDS_05200 [Ehrlichia ruminantium str.
Welgevonden]
gi|58417810|emb|CAI27014.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 277
Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats.
Identities = 70/275 (25%), Positives = 126/275 (45%), Gaps = 16/275 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------ 54
+ + +F Y A+ +E DG A ++S LLSVFPF+VF L L
Sbjct: 2 LAKKIRCIFKCSYYAVVDMIEHDGIEHAGYLSFVILLSVFPFLVFFMALMSNLAQLLHYY 61
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+I ++ P + + I ++++ P L T++ + + +S+ VE +R
Sbjct: 62 DISVSDKLIILITDNIPSEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRT 121
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
LN+A RV S+ RL+S + ++ + I + P+ + K
Sbjct: 122 ILNKACRVSSPPSYIFRRLLSIFQFISITLAMTIAMICIIVFPVIYEMLNKNLGYF---- 177
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + L LF+ + ++ +P K + +++PG + W +++FT Y+ T
Sbjct: 178 ------KYAVSELVLFVSITLLYFIIPNVKQNLANVVPGAVLVTFLWTCSSLIFTWYLKT 231
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
F + +Y LASI+ L+F Y+L +FFI GAE N
Sbjct: 232 FHQLNIIYGSLASIIASLLFFYILSIFFIYGAEFN 266
>gi|225868869|ref|YP_002744817.1| ribonuclease BN-like family protein [Streptococcus equi subsp.
zooepidemicus]
gi|225702145|emb|CAW99833.1| ribonuclease BN-like family protein [Streptococcus equi subsp.
zooepidemicus]
Length = 312
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 115/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I + HF + A ++ +L+ FP IV AN+ +L + ++ ++
Sbjct: 16 YEPIQAFMRHFQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--ISDLLRLMKE 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + + ++ + + P+ G+ I+ L + S + +L+ + N+AY E R +
Sbjct: 74 QLPKDIYRSASSIVVNIFSKPSGGVLGIATLTGLWTMSRSLASLQKAFNKAYDASEHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L+ LL L A+ + + + N+ + T+L
Sbjct: 134 LLGHLVGLLTSLLILFLLTFALIFSTFSKAAIQVLDRHYHLNDNITTLFLFLIQPITILI 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+GL+ ++ LP K KI ILPG FT + + + +Y+V S
Sbjct: 194 IFVGLMLLYFLLPNIKIKKIRYILPGTFFTTFVMIFLSNMVGNYVVHNVERMVDIKTFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+M +++ L I+GA NA+ K
Sbjct: 254 VMVFIIMLWFIFLARILIMGAVFNATYQELSIGK 287
>gi|312863911|ref|ZP_07724149.1| YihY family protein [Streptococcus vestibularis F0396]
gi|311101447|gb|EFQ59652.1| YihY family protein [Streptococcus vestibularis F0396]
Length = 313
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 115/275 (41%), Gaps = 5/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + + H+ + + ++ +L+VFP IV AN+ +L ++
Sbjct: 7 KLQWRPLQLYLRHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYLNID--TTDLLKF 64
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ P + + + + P+ L +++L + + +L+ ++N+ Y E
Sbjct: 65 MNEHLPKQFYAPAANVVQDIFSTPSGQLLGVASLTGFWTMIKSLSSLQKAINKVYGASEH 124
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +I+ ++ L+ L + I L + + +P + +I N +
Sbjct: 125 RDVFISHIVGGFMSLVILFLLTFALMLSTIIQSVLRVITQTYPIGSKMTQLILNSIQPLS 184
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F+G++ ++ LP K KI ++PG IFT + + LF Y++ +
Sbjct: 185 IAVVFLGMMVLYFVLPNVKIRKIRYVMPGTIFTTLVIGYLSNLFGTYVIRTLSRLVDIKL 244
Query: 245 LASIMT--CLVFLYMLGVFFILGAELNASMIIYYW 277
SIM +++ L ILGA NA+
Sbjct: 245 FGSIMIFVFMLWFIFLARILILGAVFNATYQELKQ 279
>gi|295426440|ref|ZP_06819090.1| possible ribonuclease BN [Lactobacillus amylolyticus DSM 11664]
gi|295063808|gb|EFG54766.1| possible ribonuclease BN [Lactobacillus amylolyticus DSM 11664]
Length = 305
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 115/262 (43%), Gaps = 8/262 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
E + + + I+ L S+FP I+ N+ + + D + +P+ ++K I
Sbjct: 23 LAEGEIFQSSIVIAYYILFSIFPIIIIVGNVLPLFHIN--TEPIADYLDLIFPDQVSKYI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ +NR Y V + ++ TR
Sbjct: 81 MPIINTLLKNNSTGYISFGIILAIWSFSNMVNAIRVGMNRLYGVHAVELKLSFLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ L + ++ V + L ++R + I++ R +L + +
Sbjct: 141 SFTILLTALMIIVFTAIALVMIFGQQVLEFLRPIMSISVGEIKKIFSYRYPVIILMMVVA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K + I PGVIFT +SW + LF Y+ F Y + + + +
Sbjct: 201 VAYLNYVLPNIKLRKRIIWPGVIFTVLSWSALSYLFGFYLHHFPISWENYGIIGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMII 274
++L ++ + F+ G +NA++
Sbjct: 261 LWLNIISLLFLFGTSINATITR 282
>gi|307705268|ref|ZP_07642134.1| ribonuclease BN-like family protein [Streptococcus mitis SK597]
gi|307621181|gb|EFO00252.1| ribonuclease BN-like family protein [Streptococcus mitis SK597]
Length = 286
Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 117/269 (43%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + VV
Sbjct: 13 LVKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VSNFLKVVNEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + I +VL P+ GL + + L+A + S + L+ + N+AY V + R
Sbjct: 71 PDTMYDVVAKIITEVLTQPSTGLLSFAVLSALWTFSKSMNFLQKAFNKAYGVAKNRGMIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + + F+ V + L V+ ++ + L + + +F
Sbjct: 131 HQLMSLFVSFGLQILFTLALFLSVFGRMLLNLVKSYWKSDSPLFDYLQDLTGPLVYALIF 190
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP K +I +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 191 AILVMLYYFLPNVKVRRIRHVLPGSAFVLLTLALLLNIFSVYVNNYVNHLVDVRFFSSIV 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ I+GA +NAS+
Sbjct: 251 VVVMMFWFILIAKILIVGAVINASVQSLK 279
>gi|322377322|ref|ZP_08051813.1| putative ribonuclease BN [Streptococcus sp. M334]
gi|321281522|gb|EFX58531.1| putative ribonuclease BN [Streptococcus sp. M334]
Length = 291
Score = 158 bits (400), Expect = 9e-37, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 120/269 (44%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + VV
Sbjct: 18 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VSNFLKVVNEFL 75
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE I + + I +VL P+ GL + + L+A + S + L+ + N+AY V + R
Sbjct: 76 PETIYDVVANIITEVLTQPSTGLLSFAVLSALWTFSKSMNFLQKAFNKAYGVAKNRGMIS 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++L+S + + F+ V + L ++ ++ + L + + +F
Sbjct: 136 SQLMSLFVSFGLQILFALALFLSVFGRMLLNLIKSYWKSDSPLFDYLQDLTGPLVYALIF 195
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP +I S+LPG F ++ V+ +F+ Y+ + + +SI
Sbjct: 196 AILVMLYYFLPNVTVRRIRSVLPGSAFVMLTLVLLLNIFSVYVNNYVNHIVDVRFFSSIV 255
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ I+GA +NAS+
Sbjct: 256 VVVMMFWFILIAKILIVGAVINASVQSLK 284
>gi|240146019|ref|ZP_04744620.1| YihY family protein [Roseburia intestinalis L1-82]
gi|257201833|gb|EEV00118.1| YihY family protein [Roseburia intestinalis L1-82]
Length = 285
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + + + A ++ + +LS+ PF++ ++L + + T++
Sbjct: 2 IWKIIGNVMSFMGKCKRDKINAYSAQSAFFIILSLIPFLMVFSSLLQYTSVTE--GTLLK 59
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ PE IA + I +V + G+ +I+A+ A + ++ GV+ + LN + E
Sbjct: 60 IIERVMPEYIAPFLISLIDEVY-NRSAGIISITAIVAIWSAAKGVQYMTDGLNSVNDLEE 118
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+W + R+ + Y ++ V +V V V ++ P L + + ++ + R
Sbjct: 119 TRNWLVLRMWAVVYTVIFLVAIVFTLLVIVFGNSLQKLASQYIPLLRHAVDLLAHFRGLI 178
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L + + LP K S LPG ++W + ++ + Y+ F+ +S MY
Sbjct: 179 MLVMLIVFFDVIFTALPNKKLTFKSQLPGAAICGVAWYIFSIGVSIYVDYFNGFS-MYGS 237
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
L +I +++LY ++ AE+N
Sbjct: 238 LTTIALIMLWLYFCMYIMMMSAEVN 262
>gi|260438511|ref|ZP_05792327.1| YihY family protein [Butyrivibrio crossotus DSM 2876]
gi|292809100|gb|EFF68305.1| YihY family protein [Butyrivibrio crossotus DSM 2876]
Length = 284
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 112/262 (42%), Gaps = 2/262 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
F I + A A+ +L ++S P ++ + + + + +++ V
Sbjct: 3 FFASIAAISTKIKHDKINAFAAESALFIIMSFIPCLILLMLIVKYTPLTEEL--ILNFVN 60
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P T I + IS ++ + + G +L LN + + E R+
Sbjct: 61 DVVPSAFVPTATKHIHDAYTDANFTMILISGISLIWAAGKGFVSLIDGLNAVFNIKEHRN 120
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W++ RL + Y ++ V +++ ++V + + P + ++L I R +
Sbjct: 121 WFVIRLYAILYTIIFLVIILLCVVIYVLGYRINDFFKVKAPVISDILDKILAFRALIVIF 180
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + F+++ +P +KI PG +F+ + W + F+ Y S S +Y L +
Sbjct: 181 VLTVLFTFLYVAIPNRHTKIKRQFPGALFSAVGWTGFSFFFSLYFKYSSRLSEIYGSLTT 240
Query: 248 IMTCLVFLYMLGVFFILGAELN 269
I+ +++LY+ F++GAE+N
Sbjct: 241 IVCVMLWLYVCMYIFLMGAEIN 262
>gi|228477289|ref|ZP_04061927.1| ribonuclease BN [Streptococcus salivarius SK126]
gi|228251308|gb|EEK10479.1| ribonuclease BN [Streptococcus salivarius SK126]
Length = 313
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 114/275 (41%), Gaps = 5/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + + H+ + ++ +L+VFP IV AN+ +L ++
Sbjct: 7 KLQWRPLQVYLRHYRSAEIDISTIAVAYYLILTVFPLIVIAANVFPYLNID--TTDLLKF 64
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ P + + + + P+ L +++L + + +L+ ++N+ Y E
Sbjct: 65 MNEHLPKQFYAPAANVVQDIFSTPSGQLLGVASLTGFWTMIKSLSSLQKAINKVYGASEH 124
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +I+ +I L+ L + I L + + +P + +I N +
Sbjct: 125 RDVFISHIIGGFMSLVILFLLTFALMLSTIIQSVLRVINQTYPIGSKMTQLILNSIQPLS 184
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F+G++ ++ LP K KI ++PG IFT + + LF Y++ +
Sbjct: 185 IAVVFLGMMVLYFVLPNVKIRKIRYVMPGTIFTTLVIGYLSNLFGTYVIRTLSRLVDIKL 244
Query: 245 LASIMT--CLVFLYMLGVFFILGAELNASMIIYYW 277
SIM +++ L ILGA NA+
Sbjct: 245 FGSIMIFVFMLWFIFLARILILGAVFNATYQELRQ 279
>gi|291536120|emb|CBL09232.1| Predicted membrane protein [Roseburia intestinalis M50/1]
Length = 285
Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + + + A ++ + +LS+ PF++ ++L + + T++
Sbjct: 2 IWKIIGNVMSFMGKCKRDKINAYSAQSAFFIILSLIPFLMVFSSLLQYTSVTE--GTLLK 59
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ PE IA + I +V + G+ +I+A+ A + ++ GV+ + LN + E
Sbjct: 60 IIERVMPEYIAPFLISLIDEVY-NRSAGIISITAIVAIWSAAKGVQYMTDGLNSVNDLEE 118
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+W + R+ + Y ++ V +V V V ++ P L + + ++ + R
Sbjct: 119 TRNWLVLRMWAVVYTVIFLVAIVFTLLVIVFGNSLQKLASQYIPLLRHAVDLLAHFRGLI 178
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L + + LP K S +PG ++W + ++ + Y+ F+ +S MY
Sbjct: 179 MLVMLIVFFDVIFTALPNKKLTFKSQIPGAAICGVAWYIFSIGVSIYVDYFNGFS-MYGS 237
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
L +I +++LY ++ AE+N
Sbjct: 238 LTTIALIMLWLYFCMYIMMMSAEVN 262
>gi|304439597|ref|ZP_07399501.1| possible ribonuclease BN [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371909|gb|EFM25511.1| possible ribonuclease BN [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 308
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 7/264 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ +++ AMA ++ +LS+FPFI+ N+ F+ V + PE
Sbjct: 22 KLLFRIGDKNLPAMAGSLTFFTILSIFPFIIAFLNIISFVEVFNQSEFV--NLMTMLPEE 79
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I I + I Q+ + GL ++S + + +S+GV+ L I++N AY + + R++++ RL
Sbjct: 80 IYSIIAEFISQMNKASSTGLLSVSLILGIFSASSGVKQLIININYAYGIKDNRNYFLRRL 139
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYATMLALFIG 192
I+ + LL V ++++S V +A+ F N + R + + I
Sbjct: 140 IAAVFTLLLMVMIILISITSVVGEMAITKAILFLQIDASNFYNVFKALRNLVPIAYMLII 199
Query: 193 LIFVHLFLPA----AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I ++ F KI +LPG IFT I + + LF Y+ F+ YS Y L SI
Sbjct: 200 FIVMYYFTLNKNIRRNIKITEVLPGAIFTTIGQNLFSALFGVYLQNFAKYSVTYGSLGSI 259
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
L + Y + ++G+E+N +
Sbjct: 260 FAFLTWSYFMSYTMLIGSEINGVL 283
>gi|153813966|ref|ZP_01966634.1| hypothetical protein RUMTOR_00173 [Ruminococcus torques ATCC 27756]
gi|145848362|gb|EDK25280.1| hypothetical protein RUMTOR_00173 [Ruminococcus torques ATCC 27756]
Length = 236
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 104/223 (46%), Gaps = 5/223 (2%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ V +PE +A I + QV + + ++ + A + + GV ++ LN
Sbjct: 3 EVMTAVLKVFPESVAPMIRSIVSQVY-FQSGTIVPVTIVVALWSAGKGVLSVTSGLNSIC 61
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+E R+++ R+ + Y ++ + +V + V + + P L ++ I
Sbjct: 62 ENMETRNYFYLRIRASFYTVIFLLAIVSSLVLSVFGNRISVMIYEHIPFLSKVVEFIIRI 121
Query: 181 RIYATMLALFIGLIFVHLFLPAA----KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + T + L + V+ FLP K+ + LPG +FT W++ + F+ Y+ F
Sbjct: 122 RTFVTFVVLTVFWDLVYRFLPNRRNMAKTTLRKQLPGAVFTACGWLLLSFFFSVYLDVFK 181
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++MY L +I+ +++LY +LG E+NA + + ++
Sbjct: 182 GFTSMYGSLTTIILIMLWLYGCMYIILLGGEINALLEKFLQKR 224
>gi|222153325|ref|YP_002562502.1| ribonuclease BN-like family protein [Streptococcus uberis 0140J]
gi|222114138|emb|CAR42618.1| ribonuclease BN-like family protein [Streptococcus uberis 0140J]
Length = 315
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 117/274 (42%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ + + HFV + + ++ +++VFP I+ AN+ +L + ++ ++
Sbjct: 17 YEPVQAFMRHFVSAEMDLSSIAVAYYLIITVFPLIIIAANIFPYLNID--ISDLLSLMKQ 74
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ P I KP + + + PA G+ ++ +A + S + +L+ ++N+AY V E R +
Sbjct: 75 SLPVDIYKPAAAVVTNIFSKPAGGILGMATVAGLWTMSRSLTSLQKAVNKAYGVSEHRDF 134
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ +I + L + + + + + N+ + T++
Sbjct: 135 LVSHIIGLFISVFILFLLTFVLIFSTFSKATIQLLDRHYHLSDNVTSLFLLLIQPTTIVI 194
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F G++ ++ LP K KI ILPG IFT + + +Y+V S
Sbjct: 195 IFSGIMVLYFLLPNVKIRKIRYILPGTIFTAFVMTFMSNMIANYVVHNVERMVDIKAFGS 254
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
IM +++ L I GA NA+ K
Sbjct: 255 IMIFIIMLWFIFLARILIFGAICNATYQELDQGK 288
>gi|225870127|ref|YP_002746074.1| ribonuclease BN-like family protein [Streptococcus equi subsp. equi
4047]
gi|225699531|emb|CAW93105.1| ribonuclease BN-like family protein [Streptococcus equi subsp. equi
4047]
Length = 312
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 114/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I + HF + A ++ +L+ FP IV AN+ +L + ++ ++
Sbjct: 16 YEPIQAFMRHFQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--ISDLLRLMKE 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + + ++ + + P+ + ++ L + S + +L+ + N+AY E R +
Sbjct: 74 QLPKDIYRSASSIVVNIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAFNKAYDASEHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L+ LL L A+ + + + N+ + T+L
Sbjct: 134 LLGHLVGLLTSLLILFLLTFALIFSTFSKAAIQVLDRHYHLNDNITTLFLFLIQPITILI 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+GL+ ++ LP K KI ILPG FT + + + +Y+V S
Sbjct: 194 IFVGLMLLYFLLPNIKIKKIRYILPGTFFTTFVMIFLSNMVGNYVVHNVERMVDIKTFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+M +++ L I+GA NA+ K
Sbjct: 254 VMIFIIMLWFIFLARILIMGAVFNATYQELSIGK 287
>gi|306833155|ref|ZP_07466285.1| possible ribonuclease BN [Streptococcus bovis ATCC 700338]
gi|304424729|gb|EFM27865.1| possible ribonuclease BN [Streptococcus bovis ATCC 700338]
Length = 309
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/277 (21%), Positives = 115/277 (41%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + ++H+ + A ++ LL+ FP IV AN+ +L + ++
Sbjct: 13 RLKWQPLQVYLKHYQSAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--ISVLLSF 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + ++ + + P+ + ++ L A + S + +L+ ++N+AY V +
Sbjct: 71 MEKNLPTNLYPSVSAITTDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVSQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + I RLI LL L + AL + + + ++ N T
Sbjct: 131 RDFVIGRLIGVLASLLILFLLTFVLIFSTFSKAALQIISTHYDLSDTVATVVLNLSQPVT 190
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + GL+ ++ LP K + ILPG IFT V LF++YI+
Sbjct: 191 VLTIVFGLMLLYFILPNVKIRRFRYILPGTIFTSFVIVFLNNLFSNYILRTFERMVDIKT 250
Query: 245 LASIMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ +++ L ILGA NA+ K
Sbjct: 251 FGSVVIFVLMLWFIFLAHILILGAIFNATYQELRQGK 287
>gi|332293231|ref|YP_004431840.1| ribonuclease BN [Krokinobacter diaphorus 4H-3-7-5]
gi|332171317|gb|AEE20572.1| ribonuclease BN [Krokinobacter diaphorus 4H-3-7-5]
Length = 315
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 121/274 (44%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ + AS I+ S +++FP ++F NL ++ F + ++
Sbjct: 37 LLYLLRAYFNGIIQGALGSRASSIAYSFFMAIFPALLFLLNLVPYVPIENFDIKFMAFIY 96
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I+ + GL + + L A + ++NGV A+ ++ R+
Sbjct: 97 ELIPAQSLDFFKPIIIDISQNERAGLASFAGLLALFLTANGVNAIFSGFEGSHYNEISRN 156
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYATM 186
++ ++ G ++ ++ LV V + L L +R+ ++ + ++ G+ +
Sbjct: 157 FFRQYAVALGTSIILALLLVTTISVVIYFELLLNSLRERDFMSNDMDIALLSIGKNLFLI 216
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ ++ + ++ F K PG + T I +++ LF YI F TY+ +Y +
Sbjct: 217 IMIYSVIATLYYFGTKEGRKSRFFSPGALMTTILFMITTYLFGIYIDNFGTYNELYGSIG 276
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ ++++++ +LG ELNA++ K
Sbjct: 277 ALLIMMLYIWLNSNLILLGYELNATLQKLRILHK 310
>gi|89891451|ref|ZP_01202956.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
gi|89516225|gb|EAS18887.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
Length = 309
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 117/270 (43%), Gaps = 1/270 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D+ I + A AS IS S +++FPF++F NL F+ F ++ V
Sbjct: 34 LYDVAETYIIGIAQGAFSARASAISYSFFMAIFPFLLFVLNLIPFIPIENFQNEFLEFVI 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ GL TI+ +++ F SNGV A+ R++ R
Sbjct: 94 ELLPAQAVSIFDQIFKEIALQGNTGLLTIAFVSSLIFMSNGVNAVFNGFERSFHTDFNRG 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN-LLLIIWNGRIYATM 186
++ IS +L ++ L+IM V + L +RK + R +
Sbjct: 154 FFRQYAISLAVSVLLTIFLLIMVIVTGYVEYLLEELRKSNIMSETGQGETLVFVRYLIVI 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ +I + ++ F + G T + V+ +VL+ YI F++Y+ +Y +
Sbjct: 214 ILTYIFVAVLYYFGTRDGRQTRFFSIGASVTTVLIVLLSVLYGVYIDNFTSYNEIYGSIG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+++ ++++++ +LG ELNAS+
Sbjct: 274 ALLILMIYIWLNSNILLLGFELNASLRKLK 303
>gi|86130265|ref|ZP_01048865.1| YihY family protein [Dokdonia donghaensis MED134]
gi|85818940|gb|EAQ40099.1| YihY family protein [Dokdonia donghaensis MED134]
Length = 313
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 118/274 (43%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ + A I+ S +++FP ++F NL ++ F + ++
Sbjct: 37 LLNLSRAYFTGIIKGALGSRAGSIAYSFFMAIFPALIFVLNLIPYVPVPDFDIKFMAFIY 96
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + GL +++ L A + ++NGV ++ ++ RS
Sbjct: 97 ELIPSQSLDFFRPIISDIAQNERAGLLSVAGLLALFLTANGVNSIFSGFEGSHYNEINRS 156
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYATM 186
++ ++ ++ ++ LV V V L +++ +L + ++ G+ +
Sbjct: 157 FFRQYAVAIATSIILALLLVTTISVVVYFEYLLVSLKERDFMSTDLDITLLSVGKNVFVL 216
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ ++ + ++ F K PG + T + +++ LF YI TF Y+ +Y +
Sbjct: 217 IMIYAVIATLYYFGTKEGRKSRFFSPGALMTTVLFMITTYLFGIYIDTFGRYNELYGSIG 276
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ ++++++ +LG ELNA++ K
Sbjct: 277 ALLIMMLYIWLNSNLILLGFELNATLQKLRILHK 310
>gi|89067849|ref|ZP_01155293.1| ribonuclease BN [Oceanicola granulosus HTCC2516]
gi|89046447|gb|EAR52503.1| ribonuclease BN [Oceanicola granulosus HTCC2516]
Length = 300
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 102/256 (39%), Gaps = 9/256 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + E++ +A+ + ++++FP I + G + V + ++
Sbjct: 8 WKAMKSVAVEIGEKNLGLIAAGCAFFGIVAIFPAIGAIIAIFGLVADPAIVSAQLQLMEE 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEM 125
P K +++I +LA L S L A + + GV ++ LN +
Sbjct: 68 FIPAEAYKLFSEQINALLAARTDQLGWTSLLSLMIALWSARLGVASIMQGLNAIHGQP-N 126
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +++ + V + V P+ ++++ A ++ R
Sbjct: 127 RGGLRQIMVALLLTVSLIGVSVASLLLVVIAPIVFSFLQLGAAA----AWLLEALRWLVA 182
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L GL ++ F P A+ + + PG + + W+ +V F+ Y+ F Y+ +Y
Sbjct: 183 LFILLAGLGILYRFGPNARGDRPSWVSPGAVLAVVLWLAASVGFSLYLANFGRYNEVYGS 242
Query: 245 LASIMTCLVFLYMLGV 260
+ +++ L++LY+
Sbjct: 243 IGAVIALLIWLYISAF 258
>gi|291539020|emb|CBL12131.1| Predicted membrane protein [Roseburia intestinalis XB6B4]
Length = 285
Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 119/265 (44%), Gaps = 4/265 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + + + A ++ + +LS+ PF++ ++L + + T++
Sbjct: 2 IWKIIGNVMSFMGKCKRDKINAYSAQSAFFIILSLIPFLMVFSSLLQYTSVTE--GTLLK 59
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ PE IA + I +V + G+ +I+A+ A + ++ GV+ + LN + E
Sbjct: 60 IIERVMPEYIAPFLISLIDEVY-NRSAGIISITAIVAIWSAAKGVQYMTDGLNSVNDLEE 118
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+W + R+ + Y ++ V +V V V ++ P L + + ++ + R
Sbjct: 119 TRNWLVLRMWAVVYTVIFLVAIVFTLLVIVFGNSLQKLASQYIPLLRHAVDLLAHFRGLI 178
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L + + LP K S +PG ++W + ++ + Y+ F+ +S MY
Sbjct: 179 MLAMLIVFFDVIFTALPNKKLTFKSQIPGAAICGVAWYIFSIGVSIYVDYFNGFS-MYGS 237
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
L +I +++LY ++ AE+N
Sbjct: 238 LTTIALIMLWLYFCMYIMMMSAEVN 262
>gi|288904981|ref|YP_003430203.1| Ribonuclease BN protein [Streptococcus gallolyticus UCN34]
gi|306831051|ref|ZP_07464212.1| possible ribonuclease BN [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325977948|ref|YP_004287664.1| putative ribonuclease BN protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288731707|emb|CBI13268.1| putative Ribonuclease BN protein [Streptococcus gallolyticus UCN34]
gi|304426617|gb|EFM29728.1| possible ribonuclease BN [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325177876|emb|CBZ47920.1| putative ribonuclease BN protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 310
Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + ++H+ + A ++ LL+ FP IV AN+ +L + ++ +
Sbjct: 16 WQPLQVYLKHYRSAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--ISVLLSFMEK 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + ++ + + P+ + ++ L A + S + +L+ ++N+AY V + R +
Sbjct: 74 NLPTNLYPSVSAITTDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVSQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I RLI LL L + AL + + + ++ N T+L
Sbjct: 134 VIGRLIGVLASLLILFLLTFVLIFSTFSKAALQIISAHYDLSDTVATVVLNLSQPVTVLT 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ GL+ ++ LP K + ILPG IFT V LF++YI+ S
Sbjct: 194 IVFGLMLLYFILPNVKIRRFRYILPGTIFTSFVIVFLNNLFSNYILRTFERMVDIKTFGS 253
Query: 248 IMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++ L ILGA NA+ K
Sbjct: 254 VVIFVLMLWFIFLAHILILGAIFNATYQELRQGK 287
>gi|91215702|ref|ZP_01252672.1| hypothetical protein P700755_02257 [Psychroflexus torquis ATCC
700755]
gi|91186168|gb|EAS72541.1| hypothetical protein P700755_02257 [Psychroflexus torquis ATCC
700755]
Length = 307
Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 119/274 (43%), Gaps = 2/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVV 66
++D++ I ++ A I+ S +++FPF++F NL F+ F +++
Sbjct: 35 LYDLLSLYISGIIKGTFSTRAGSIAFSFFMAIFPFLLFVLNLIPFVWFIDDFQQELLNYF 94
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D + P GL + + + + SNGV A+ +Y R
Sbjct: 95 EELLPPQTSGLFQDIFFDIANNPRAGLLSFVFVLSIFLMSNGVNAIFTGFEFSYHTKINR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + G ++ ++ L+I V + +G+ L++ GR +
Sbjct: 155 TIIRQYIAAVGVAIIVAILLLIAVIATVYFSFVIDQFTS-IGVVGDSLVLARYGRFAILI 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L +G+ ++ F K + PG FT I V+ LF+ Y+ FS Y+ +Y +
Sbjct: 214 IVLILGISILYYFGTREGRKTRFLSPGSFFTTILIVLTTYLFSIYVENFSAYNKLYGSIG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ ++++++ +LG ELN ++ + K
Sbjct: 274 ALLILMLYIWLNSNILLLGFELNGALYNLKRKSK 307
>gi|295133960|ref|YP_003584636.1| ribonuclease BN [Zunongwangia profunda SM-A87]
gi|294981975|gb|ADF52440.1| ribonuclease BN [Zunongwangia profunda SM-A87]
Length = 310
Score = 156 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 116/257 (45%), Gaps = 5/257 (1%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV----IDVVFGAWPEVIAKPITD 80
AS I+ S +++FPF++F NL ++ + + + P + ++D
Sbjct: 52 STRASAIAFSFFMALFPFLLFIFNLIPYVEETNLIDDFRIKFLLFIDTLLPPETQEYVSD 111
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ P GL + S L + + +NGV A+ +Y RS + +I+ G L
Sbjct: 112 IFADIANNPRGGLLSFSFLLSIFLMTNGVNAIFTGFEFSYHTNIKRSLFRQYIIAIGVSL 171
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L+I + V + A+ + ++ + N + +A +L ++I + ++ F
Sbjct: 172 VLAFLLLITVILMVYLTYAVEDLSEY-GLIANDGSGANVVKYFAFVLLIYIAVATLYYFG 230
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
K G FT I ++ + LF YI FS Y+ +Y + +++ +V++++
Sbjct: 231 TKEARKARFFSVGAFFTTILIMLTSFLFGLYIENFSNYNELYGSIGALLILMVYIWLNAN 290
Query: 261 FFILGAELNASMIIYYW 277
+LG ELNAS+I
Sbjct: 291 ILLLGFELNASLIKLKK 307
>gi|315223035|ref|ZP_07864914.1| YihY family protein [Streptococcus anginosus F0211]
gi|315187985|gb|EFU21721.1| YihY family protein [Streptococcus anginosus F0211]
Length = 316
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 58/284 (20%), Positives = 120/284 (42%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M+++ + + + + + + ++ L+S+FP ++ N+ +
Sbjct: 15 MKKFVSKIGQNPFLQSFFKFYQASEIDLTSIAVAYYLLISIFPLLLIVVNILPYFQIP-- 72
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ ++ + PE + + + +L P+ GL + S L+A + S + L+ + N+
Sbjct: 73 IAEFLEAMEDVLPESLYEVVAKVTRNLLTQPSSGLLSFSILSALWAFSQSMSFLQKAFNK 132
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R RL S L + + + ++L + F+ G L +
Sbjct: 133 AYGVAKDRGLISHRLFSLVISLGLQFLFALSLLLTMFGRMSLRLLHSFWEFDGQLYASLQ 192
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF+ L+ ++ FLP K KI +LPG IF + V LF+ Y+ T+
Sbjct: 193 RMTQPTIYTLLFLSLLMLYYFLPNVKIRKIRYVLPGTIFVVFTIGVLLNLFSVYLDTYVN 252
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +SI + +++ + I+GA LNAS + ++
Sbjct: 253 HLMDVRFFSSIFVVVVMIWFTFIAQIMIIGAILNASYQGCHEKE 296
>gi|163755344|ref|ZP_02162464.1| hypothetical protein KAOT1_07988 [Kordia algicida OT-1]
gi|161324764|gb|EDP96093.1| hypothetical protein KAOT1_07988 [Kordia algicida OT-1]
Length = 315
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ I + + A I+ S +++FP ++F NL ++ F + I +
Sbjct: 35 IYDLMEMYIVGIINGALTSRAGSIAFSFFMAIFPSLLFLLNLLPYVPIDGFQGSFIRAIT 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + + I+ ++ GL + + L + + +NGV A+ +Y +++ R
Sbjct: 95 SLLPDESGNFMNEIIVDIVKNKRGGLLSSTFLLSIFLMANGVSAIFAGFETSYYILKKRR 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF------FPALGNLLLIIWNGR 181
++ L + G L+ ++ L+ V + + + F F I +
Sbjct: 155 FFQQYLYALGVGLILALLLISTVIVLGYTEIYIVRISDFAVKTTGFKISQTNEFWITIAK 214
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ +++G ++ F + PG + T + V+ + LF YI FS Y+ +
Sbjct: 215 FSFLIVMVYLGTAILYYFGTHQGRRAKFFSPGALLTTVLIVLTSYLFGIYIANFSQYNEL 274
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y + +++ ++++++ +LG ELNAS+ + +K+
Sbjct: 275 YGSIGALLILMMYIWLNANILLLGFELNASLDMLRIKKE 313
>gi|282881919|ref|ZP_06290564.1| T-RNA-processing ribonuclease BN [Peptoniphilus lacrimalis 315-B]
gi|281298194|gb|EFA90645.1| T-RNA-processing ribonuclease BN [Peptoniphilus lacrimalis 315-B]
Length = 299
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 127/276 (46%), Gaps = 9/276 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + E D + + ++ +LS+FPF++ N+ FL I +
Sbjct: 14 LNFFDKLLYRLKENDITSYGAGLAFFLILSIFPFLIALINIVNFLDIINV--DNILNLMQ 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+P + + + + +++ + L +IS LA + +S+ + L +N +Y + R++
Sbjct: 72 YFPNSVKEIVKNFFIELNITSSTELLSISVLAGLFSASSAINKLIKFINNSYGFEDNRNF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYATML 187
++ R+++ + LL ++++ V + F ++ +W ++
Sbjct: 132 FLNRVLAIIFTLLFIFMILLLIVSQVFGKIIFYKFISIFHIDSKIIYFLWIIANSLIPLI 191
Query: 188 ALFIGLIFVHLFLP----AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
LF+ V+ F P K K +++PG +F+ + ++ V+F Y+ F YS Y
Sbjct: 192 YLFLTFSAVYRFAPCPPKNDKIKYKTVIPGSLFSTFAVIIATVIFAFYVNNFGKYSITYG 251
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L I+ L++L++L ++GAE+N +++Y +K
Sbjct: 252 SLGGIIVFLIWLFLLSTLILIGAEIN--IVLYSLKK 285
>gi|322373467|ref|ZP_08048003.1| YihY family protein [Streptococcus sp. C150]
gi|321278509|gb|EFX55578.1| YihY family protein [Streptococcus sp. C150]
Length = 319
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 116/275 (42%), Gaps = 5/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + + H+ + ++ +L+VFP IV AN+ +L +++
Sbjct: 13 RLQWRPLQVYLRHYRSAEIDISTIAVAYYLILTVFPLIVIAANVFPYLNID--TTDLLNF 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ P + + V + P+ L +++L + + +L+ ++N+ Y E
Sbjct: 71 MSEHLPKQFYAPAANVVKDVFSTPSGQLLGVASLTGFWTMIKSLSSLQKAINKVYGASEH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +I+ +I L+ L + + L + + +P NL +I N +
Sbjct: 131 RDVFISHIIGGLLSLVILFLLTFALMLSTIVQSVLRVINQTYPIGSNLTQLILNSIQPLS 190
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F+G++ ++ LP K KI I+PG IFT + + LF Y++ +
Sbjct: 191 VAVVFLGVMVLYFILPNVKIRKIRYIMPGTIFTTLVIGYLSNLFGTYVIRTLSRLVDIKL 250
Query: 245 LASIMT--CLVFLYMLGVFFILGAELNASMIIYYW 277
SIM +++ L ILGA NA+
Sbjct: 251 FGSIMIFVFMLWFIFLARILILGAIFNATYQELKQ 285
>gi|300021750|ref|YP_003754361.1| ribonuclease BN [Hyphomicrobium denitrificans ATCC 51888]
gi|299523571|gb|ADJ22040.1| ribonuclease BN [Hyphomicrobium denitrificans ATCC 51888]
Length = 294
Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 77/275 (28%), Positives = 141/275 (51%), Gaps = 7/275 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+++AI E G+AMA ++ S ++S+FPF +F L+G G + I+ +F P
Sbjct: 7 LFEAIYRLYEHSGFAMAGAVAFSFVVSIFPFCIFLGALSGVFGGRELAQDAINQLFAILP 66
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E +AK I EI V+ L T S A +F+++ +E LR +LN AYRV E R + +
Sbjct: 67 EPVAKGIAPEIEAVMGSRRIDLLTASGFLALFFATSAIETLRAALNGAYRVHEKRPYPLC 126
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIP------LALAYVRKFFPALGNLLLIIWNGRIYAT 185
LIS +V +++++ +++++ V P +A + ++ L + + R
Sbjct: 127 LLISMLFVFVSAISTLVLTWAVVVGPSVVGPAIASQFESEWVKRLFDSTALGPGVRYGLA 186
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L +HL+L A + ++ + PGV+ + + W+ A L++ Y+ + YS YAGL
Sbjct: 187 GAVIAAQLCALHLWLAAGRRRLADVWPGVLLSIVLWLALAGLWSRYLA-ITNYSLFYAGL 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +M L+F + +LGAE N + ++
Sbjct: 246 SQLMIALIFFQFTAITILLGAEFNRGVSEMKRMRR 280
>gi|148557661|ref|YP_001265243.1| ribonuclease BN [Sphingomonas wittichii RW1]
gi|148502851|gb|ABQ71105.1| ribonuclease BN [Sphingomonas wittichii RW1]
Length = 307
Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 118/271 (43%), Gaps = 5/271 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + A+ + G+ A +I+ ALL++FPF + A LA G V +
Sbjct: 25 GRIYTVFRRAVLGVYAD-GFIHAGNIAYLALLTMFPFFIVMAALAQLFGRTPDVQHAVYG 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + + + I VLA KG L + AL + + +E +R L RAY
Sbjct: 84 FLATVPPSVRQLVAQPISDVLAANNKGALLWLGALVGLWTVGSFIETIRDILYRAYGTRP 143
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+S++ R + ++++ + + V + + + P L +I R+ A
Sbjct: 144 SKSFWHYRAGAILIIVVSVILAMAAFSAQVVLTGVEQVIWRLLPFADELQPLINLSRL-A 202
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMS--ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L L L + + L A+ ++ PG +FT W+ +L + F Y Y
Sbjct: 203 PLLMLAGALYAMFVTLTPARYRLSDCPKWPGALFTAGWWMAVTMLLPIVVGAFGGYGRTY 262
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
LA ++ L+F +++G+ + GA LNA++
Sbjct: 263 GSLAGVIVTLLFFWLVGLGLVFGAHLNAALA 293
>gi|218132840|ref|ZP_03461644.1| hypothetical protein BACPEC_00701 [Bacteroides pectinophilus ATCC
43243]
gi|217991713|gb|EEC57717.1| hypothetical protein BACPEC_00701 [Bacteroides pectinophilus ATCC
43243]
Length = 283
Score = 155 bits (393), Expect = 6e-36, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 114/260 (43%), Gaps = 3/260 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ I +D A+ S LLS FPFI +L +L V ++ V+ P
Sbjct: 15 FQIINKIKNDDLPGYAAQSSYFILLSFFPFITLLLSLIHYLPLEYDV--LMQVLNDIIPA 72
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + + SA+ + + G +L N + + E R++ + R
Sbjct: 73 YFKEAAVSFVGGLYNSSSISFTGFSAIVTLWAAGRGFMSLMKGFNAIHGIAEDRNFIVRR 132
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
IS LL + + + V L + ++FP L ++ + + + + L +
Sbjct: 133 SISSVQTLLFIIIIAALLIFVVFGNKLLGFTSRYFPYLAIIIEAVIDIKWLFFPVLLTLA 192
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+F+ F+P+ + + + LPG + + + W ++++ Y+ +TY+ M+ GL +++ L
Sbjct: 193 FLFMFKFIPSRRLPLFAQLPGAVISSVGWYGFSLIYAVYVNN-NTYTAMFGGLGTLILAL 251
Query: 253 VFLYMLGVFFILGAELNASM 272
V+LY + GAE N+ +
Sbjct: 252 VWLYSCMMILFFGAEFNSLI 271
>gi|300813395|ref|ZP_07093746.1| YihY family protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512538|gb|EFK39687.1| YihY family protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 299
Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 126/276 (45%), Gaps = 9/276 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + E D + + ++ +LS+FPF++ N+ FL I +
Sbjct: 14 LNFFDKLLYRLKENDITSYGAGLAFFLILSIFPFLIALINIVNFLDIINI--DNILNLMQ 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+P + + + + +++ + L +IS LA + +S+ + L +N +Y + R++
Sbjct: 72 YFPNSVKEIVKNFFIELNITSSTELLSISVLAGLFSASSAINKLIKFINNSYGFEDNRNF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYATML 187
+ R+++ + LL ++++ V + F ++ +W ++
Sbjct: 132 FFNRVLAIIFTLLFIFMILLLIVSQVFGKIIFYKFISIFHIDSKIIYFLWIIANSLIPLI 191
Query: 188 ALFIGLIFVHLFLP----AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
LF+ V+ F P K K +++PG +F+ + ++ V+F Y+ F YS Y
Sbjct: 192 YLFLTFSAVYRFAPCPPKNDKIKYKTVIPGSLFSTFAVIIATVIFAFYVNNFGKYSITYG 251
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L I+ L++L++L ++GAE+N +++Y +K
Sbjct: 252 SLGGIIVFLIWLFLLSTLILIGAEIN--IVLYSIKK 285
>gi|86142235|ref|ZP_01060745.1| hypothetical protein MED217_11334 [Leeuwenhoekiella blandensis
MED217]
gi|85830987|gb|EAQ49444.1| hypothetical protein MED217_11334 [Leeuwenhoekiella blandensis
MED217]
Length = 316
Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 115/253 (45%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
AS I+ S +++FPF +F NL ++ + F + + P + +L +
Sbjct: 54 RASAIAFSFFMALFPFFLFVLNLIPYVPINGFQSDFLSFINNLLPPQTQEFFDPILLDIA 113
Query: 87 AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
A GL + + + A + +NGV A+ ++ + RS ++ G ++ ++ L
Sbjct: 114 ANQRGGLLSFTLIFAIFLMANGVNAIFTGFEYSFHSITNRSIVKQYAVALGVSIMLALLL 173
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
+++ + + + ++ +++ + L I G A ++ ++ + ++ F
Sbjct: 174 LLVVIAVLYLQITISELKRRGIVNEDNLWISQLGSYIALIVLIYTVVATLYYFGTKEGKD 233
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ G T ++V LF YI F+TY+ +Y + +++ +V++++ +LG
Sbjct: 234 TRFLSIGATLTTFLFIVTTYLFGVYINNFATYNQLYGSIGALLIMMVYIWLNANLLLLGF 293
Query: 267 ELNASMIIYYWRK 279
ELNAS+ R+
Sbjct: 294 ELNASLYRLKRRR 306
>gi|160881600|ref|YP_001560568.1| ribonuclease BN [Clostridium phytofermentans ISDg]
gi|160430266|gb|ABX43829.1| ribonuclease BN [Clostridium phytofermentans ISDg]
Length = 289
Score = 154 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 125/269 (46%), Gaps = 3/269 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + +I ++ A ++ + +S FPF +F ++ FL + V++
Sbjct: 3 FISIARVIRVFSHKLRDDYISAFSAQAAFFIFISFFPFAMFLLSIMQFLPFTE--NEVMN 60
Query: 65 VVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+P I + I ++ + + +++ +A + SS G ++ +N Y
Sbjct: 61 ACRSVFPAAIQGFVISIITELYGKATSTAILSVTLVATLWSSSKGFLSIIRGMNGVYANT 120
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R++ + R+ S Y LL + +++ +FV ++ K FP L L+I + R
Sbjct: 121 ETRNYIVIRIKSAIYTLLFAFMIILFLVIFVFGNQLYLWIVKRFPVLKEFALVIISVRTI 180
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L + +F+ + +P K+K++ LPG I W++ + L++ YI S YS Y
Sbjct: 181 VGLCLLIVFFLFMFMVIPNRKTKLIKELPGAILASCGWMIFSYLYSFYIDNMSNYSYTYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASM 272
L +I+ +++LY +GAE+N+ +
Sbjct: 241 SLTAIVLAMIWLYTCMYMMFIGAEVNSVL 269
>gi|312113317|ref|YP_004010913.1| ribonuclease BN [Rhodomicrobium vannielii ATCC 17100]
gi|311218446|gb|ADP69814.1| ribonuclease BN [Rhodomicrobium vannielii ATCC 17100]
Length = 344
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 111/276 (40%), Gaps = 8/276 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ + ++ +A+ ++ ALL++FP +VF + G L V + +
Sbjct: 73 LHVLVRVWKSIAADNISLLAAGVAFYALLAIFPGLVFFVAVFGLLAETGQVQNFLLTLKD 132
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEM 125
P + I ++ ++ L + + A + GV AL +LN YR E
Sbjct: 133 VLPTEAWEAINAQVEVLVRQNTTSLSLATMISLGLAFINARLGVYALMSALNGVYRRTET 192
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ T ++ + L A L V A+P V ++ R A
Sbjct: 193 RSFAHTNSLAILFTLGALAVLAFNILVVAAVPGIFRLVG----ISEFTNAVLHYARWPAL 248
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + L V+ + P K + + G + W+ + F+ Y+ F++Y +Y
Sbjct: 249 AIIVALSLAVVYRYGPDRKDAHWRWVSLGSLAATALWLAASTGFSWYVSAFNSYDRIYGS 308
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ L +L++ ++GAEL+ + ++
Sbjct: 309 FGAVVILLYWLWLTAFAALMGAELDMQIQTALEERQ 344
>gi|319939194|ref|ZP_08013557.1| methionine aminopeptidase Map [Streptococcus anginosus 1_2_62CV]
gi|319811590|gb|EFW07866.1| methionine aminopeptidase Map [Streptococcus anginosus 1_2_62CV]
Length = 302
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 115/272 (42%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + + + + ++ L+S+FP ++ N+ + + ++ +
Sbjct: 13 FLQSFFKFYQASEIDLTSIAVAYYLLISIFPLLLIVVNILPYFQIP--IAEFLEAMEDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + + + +L P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PESLYEVVAKVTRNLLTQPSSGLLSFSILSALWAFSQSMSFLQKAFNKAYGVAKDRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S L + + + ++L + F+ L + LF
Sbjct: 131 HRLFSLVISLGLQFLFALSLLLTMFGRMSLRLLHSFWEFDDQLYASLQRMTQPTIYTLLF 190
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
+ L+ ++ FLP K KI +LPG IF + V LF+ Y+ T+ + +SI
Sbjct: 191 LSLLMLYYFLPNVKIRKIRYVLPGTIFVVFTIGVLLNLFSVYLDTYVNHLMDVRFFSSIF 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +++ ++ I+GA LNAS + ++
Sbjct: 251 VVVVMIWFTLIAQIMIIGAILNASYQGCHEKE 282
>gi|171779627|ref|ZP_02920583.1| hypothetical protein STRINF_01464 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281729|gb|EDT47163.1| hypothetical protein STRINF_01464 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 306
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 60/274 (21%), Positives = 116/274 (42%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + ++H+ + A ++ LL+ FP IV AN+ +L V ++ +
Sbjct: 16 WQPLQVYLKHYRSAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--VNILLAFMKK 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + ++ + + + P+ + ++ L A + S + +L+ ++N+AY V + R +
Sbjct: 74 NLPTNLYPSVSAITIDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVAQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I RL+ LL L + L + ++ + +I N T+L
Sbjct: 134 VIGRLVGVIGSLLILFLLTFVLIFSTFSKAILQVINSYYDLSDTMATVILNLAQPVTVLT 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ IGL+ ++ LP + + ILPG IFT + V LF+ YI+ S
Sbjct: 194 IVIGLMLLYFILPNVRIRRFRYILPGTIFTSVVIVFLNNLFSSYILRTFERMVDIKTFGS 253
Query: 248 IMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++ L ILGA NA+ K
Sbjct: 254 VVIFVLMLWFIFLAHILILGAIFNATYQELRQGK 287
>gi|329116369|ref|ZP_08245086.1| YihY family protein [Streptococcus parauberis NCFD 2020]
gi|326906774|gb|EGE53688.1| YihY family protein [Streptococcus parauberis NCFD 2020]
Length = 310
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 110/273 (40%), Gaps = 5/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I + HF + + ++ +L+VFP IV AN+ +L + ++ ++ +
Sbjct: 17 ETIKAFLRHFQSAEMDLSSIAVAYYLILTVFPLIVIAANIFPYLNID--IRDLLQLMKQS 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I + ++ + + PA G+ ++ + S + +L+ ++N+AY R +
Sbjct: 75 LPNDIYQSARSVVINIFSKPAGGVLGVATFTGLWTMSKSLTSLQRAINKAYDASPHRDFL 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L+ + L + A+ + + L + T++ +
Sbjct: 135 LGHLVGLLASIFILFLLAFVLIFSTFSKAAIQVMDNHYHLSDGLTSLFLTLIQPVTIIII 194
Query: 190 FIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+GL+ ++ LP + KI I+PG +FT + L HY+V S+
Sbjct: 195 LLGLMALYFLLPNIRIKKIRYIMPGALFTGFVMTFLSNLIGHYVVVNVEKMVDIKTFGSV 254
Query: 249 MTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
M +++ L ILGA NA+ K
Sbjct: 255 MIFIIMLWFIFLARILILGAIFNATYQEIDQGK 287
>gi|22537011|ref|NP_687862.1| ribonuclease BN [Streptococcus agalactiae 2603V/R]
gi|25010920|ref|NP_735315.1| ribonuclease BN [Streptococcus agalactiae NEM316]
gi|76787357|ref|YP_329592.1| ribonuclease BN [Streptococcus agalactiae A909]
gi|76798178|ref|ZP_00780430.1| ribonuclease BN, putative [Streptococcus agalactiae 18RS21]
gi|77405554|ref|ZP_00782645.1| ribonuclease BN, putative [Streptococcus agalactiae H36B]
gi|77409314|ref|ZP_00786018.1| ribonuclease BN, putative [Streptococcus agalactiae COH1]
gi|22533867|gb|AAM99734.1|AE014230_14 ribonuclease BN, putative [Streptococcus agalactiae 2603V/R]
gi|23095299|emb|CAD46509.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562414|gb|ABA44998.1| ribonuclease BN, putative [Streptococcus agalactiae A909]
gi|76586486|gb|EAO62992.1| ribonuclease BN, putative [Streptococcus agalactiae 18RS21]
gi|77172078|gb|EAO75243.1| ribonuclease BN, putative [Streptococcus agalactiae COH1]
gi|77175861|gb|EAO78639.1| ribonuclease BN, putative [Streptococcus agalactiae H36B]
gi|319744898|gb|EFV97232.1| YihY family protein [Streptococcus agalactiae ATCC 13813]
Length = 306
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 117/268 (43%), Gaps = 5/268 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I + HF + A ++ L++ FP +V AN+ + + V ++ ++
Sbjct: 16 YRPIQVFMRHFQSAEMDLSAIAVAYYLLVTAFPLLVIAANIFPYFHIN--VSDLLSLMQK 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I +P + + + P+ G+ ++L A + S + +L+ ++N+AY V + R +
Sbjct: 74 NLPKNIYEPASRLAVDAFSKPSTGILGFASLTAFWTMSKSLTSLQKAINKAYGVDQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I+RL+ G L+ L + L + + L + N T L
Sbjct: 134 VISRLVGVGTGLIILFLLTFVLIFSTFSKPVLQIIVNMYDLGDTLTAWLLNLAQPVTFLT 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+G+ ++ LP A+ K+ ++PG +F+ + L + Y++ S
Sbjct: 194 IFLGIGILYFILPNARIRKVRYVIPGTLFSTFVIGFFSNLISQYVLNRVEKMVDIKTFGS 253
Query: 248 --IMTCLVFLYMLGVFFILGAELNASMI 273
I +++ L ILGA LNAS+
Sbjct: 254 VVIFILMLWFIFLAHIMILGAILNASVQ 281
>gi|88606794|ref|YP_505080.1| YihY family protein [Anaplasma phagocytophilum HZ]
gi|88597857|gb|ABD43327.1| YihY family protein [Anaplasma phagocytophilum HZ]
Length = 277
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 128/279 (45%), Gaps = 15/279 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ F I A+ F + DG A ++S LLS+FPF VF L + +
Sbjct: 4 QKVLTFFKCICKAVIDFRDHDGMEYAGYLSFIVLLSMFPFFVFFNALTSSIVSVLDKDQF 63
Query: 63 I-----DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ DV+ G P + I ++L+ P + L T++ + +S+ +E +R LN
Sbjct: 64 LYTRLFDVLSGELPHDTMDALLPRIEEILSGPPQSLLTVAIGGVIWTASSVIEGIRHVLN 123
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+A RV + + R+ S L+ +++ V +P+ V + + L
Sbjct: 124 KALRVSAPPPYILGRMFSILQFLIIVAVMMLSVLFAVLVPIIFEVVGRHWEFL------- 176
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
R + + LFI + +++ +P + I+ +LPG +W + ++ F+ Y+ TF
Sbjct: 177 ---RFVVSKVVLFIAVSWIYFMVPNVRQNILVVLPGAAVVTATWTLTSMAFSWYLSTFQV 233
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
T+Y L I+ ++F Y+L +FFI GAELN + +
Sbjct: 234 LKTIYGNLTGIIAAMLFFYILSIFFIYGAELNYRLSNRH 272
>gi|86138868|ref|ZP_01057440.1| ribonuclease BN, putative [Roseobacter sp. MED193]
gi|85824515|gb|EAQ44718.1| ribonuclease BN, putative [Roseobacter sp. MED193]
Length = 257
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 85/254 (33%), Positives = 139/254 (54%), Gaps = 4/254 (1%)
Query: 27 MASHISLSALLSVFPFIVFGANLAG----FLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
M+SHI++S +L++FPF++F LAG + ++D+VFG+WPE ++ PI E+
Sbjct: 1 MSSHIAMSMMLALFPFVLFTVALAGTMASVFSQGIDLDHLVDLVFGSWPEPVSTPIVSEL 60
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
VLA + GL T+ A YF+SNGV A+RI++ +AY V+ R ++++R++ G+V+L
Sbjct: 61 NAVLATSSTGLITVGGFLALYFASNGVNAVRIAMVQAYHDVDRRPFWLSRILCIGFVILG 120
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
++ + V +PL L Y+ FFP + + +L F + HL LP
Sbjct: 121 GAGILFAALFEVILPLYLHYLADFFPEVELSGYLTSGLHGLVAVLLPFFAVFLCHLVLPG 180
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
++ +LPG + T W + F Y+ + + YS YAGLA M ++FLY+
Sbjct: 181 HIHRLSHLLPGTVLTVALWWGAGIGFAFYVGSIAQYSATYAGLAGAMAAMIFLYVNAAIL 240
Query: 263 ILGAELNASMIIYY 276
I GAE N ++I
Sbjct: 241 IFGAEFNNALIELR 254
>gi|77410710|ref|ZP_00787069.1| ribonuclease BN, putative [Streptococcus agalactiae CJB111]
gi|77163246|gb|EAO74198.1| ribonuclease BN, putative [Streptococcus agalactiae CJB111]
Length = 306
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 5/268 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I + HF + A ++ L++ FP +V AN+ + + V ++ +
Sbjct: 16 YRPIQVFMRHFQSAEMDLSAIAVAYYLLVTAFPLLVIAANIFPYFHIN--VSDLLSFMQK 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I +P + + + P+ G+ ++L A + S + +L+ ++N+AY V + R +
Sbjct: 74 NLPKNIYEPASRLAVDAFSKPSTGILGFASLTAFWTMSKSLTSLQKAINKAYGVDQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I+RL+ G L+ L + L + + L + N T L
Sbjct: 134 VISRLVGVGTGLIILFLLTFVLIFSTFSKPVLQIIVNMYDLGDTLTAWLLNLAQPVTFLT 193
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+G+ ++ LP A+ K+ ++PG +F+ + L + Y++ S
Sbjct: 194 IFLGIGILYFILPNARIRKVRYVIPGTLFSTFVIGFFSNLISQYVLNRVEKMVDIKTFGS 253
Query: 248 --IMTCLVFLYMLGVFFILGAELNASMI 273
I +++ L ILGA LNAS+
Sbjct: 254 VVIFILMLWFIFLAHIMILGAILNASVQ 281
>gi|160893025|ref|ZP_02073813.1| hypothetical protein CLOL250_00563 [Clostridium sp. L2-50]
gi|156865108|gb|EDO58539.1| hypothetical protein CLOL250_00563 [Clostridium sp. L2-50]
Length = 307
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 102/221 (46%)
Query: 49 LAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG 108
L G + ++ P +A ++ + ++ + ISA+ A + ++ G
Sbjct: 59 LIGIRFLPVTQAEFVALIEEIIPGDMANMLSYMVDEIYSAQVGMTMIISAIVAIWSAAKG 118
Query: 109 VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
A+ LN R + +++ + RL + Y L+ V L+ ++ V+V + +
Sbjct: 119 TMAIERGLNFMDRTKDTKNYILRRLTNALYTLIFCVMLIALAGVYVLGNTIMEDILAKTN 178
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
+ + + R+ + +F ++ ++ LP ++ + +PG +FT + WV+ + F
Sbjct: 179 WVDYSEKVFFYSRLLTAPVLVFAVILLIYCRLPDNHLRLKTAIPGAVFTTVCWVLLSAAF 238
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ Y+ F + MY L S++ +++LY+ +LGAELN
Sbjct: 239 SSYLTYFGINTYMYGNLGSMVIAMLWLYICMYILLLGAELN 279
>gi|110637484|ref|YP_677691.1| hypothetical protein CHU_1074 [Cytophaga hutchinsonii ATCC 33406]
gi|110280165|gb|ABG58351.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 313
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 113/267 (42%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + +D A I+ LS+FP I+F L ++ ++ + G
Sbjct: 43 FLRILFKKLNNDDINVRAKSITYDFFLSIFPGIIFLFTLIPYIPIPDLDKNILSAISGFL 102
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + + ++ +P GL + L A Y ++NG+ ++ + N Y+ + RS+
Sbjct: 103 PQNIYVSVESTLTDIINIPRGGLLSFGFLFAFYAANNGIISVINTFNHCYKTTDDRSFIA 162
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
IS + L + +V + + L + F L + R++ +
Sbjct: 163 KLGISISILFLLFLVVVGGIVITWFLKLLYTNLENGFDVSSFQLYFVAFLRLFVMFFLII 222
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + ++ P+ + G + I V + F YI F++Y+ +Y + +++
Sbjct: 223 MSISIMYFIAPSIHKRWKFFSLGSVTASILCFVFNLGFGFYIEHFNSYNKVYGSIGALIG 282
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
L+ +++ + ++G ++NAS+ + +
Sbjct: 283 FLLLIFVNILMLLVGFQINASLELAHK 309
>gi|15902618|ref|NP_358168.1| ribonuclease BN, putative [Streptococcus pneumoniae R6]
gi|15458153|gb|AAK99378.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
Length = 291
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 18 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVL 75
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 76 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLIS 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S F+ + + LA + ++ G + + LF
Sbjct: 136 HQMLSLLVSFGLQFLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 195
Query: 191 IGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP + KI LPG F + + LF+ Y+ + + L S+
Sbjct: 196 AILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGVLTLFSSYLNYYVHHLVDVRILGSVL 255
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 256 LVVMMFWFILIAKIVILGAVINASMQSLK 284
>gi|298502451|ref|YP_003724391.1| ribonuclease BN [Streptococcus pneumoniae TCH8431/19A]
gi|298238046|gb|ADI69177.1| possible ribonuclease BN [Streptococcus pneumoniae TCH8431/19A]
Length = 291
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 18 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLCFMKDVL 75
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 76 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLIS 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S + F+ + + LA + ++ G + + LF
Sbjct: 136 HQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 195
Query: 191 IGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP KI LPG F + + LF+ Y+ + + L S+
Sbjct: 196 AILVMLYYFLPNISNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 255
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 256 LVVMMFWFILIAKIVILGAVINASMQSLR 284
>gi|73667122|ref|YP_303138.1| ribonuclease BN [Ehrlichia canis str. Jake]
gi|72394263|gb|AAZ68540.1| Ribonuclease BN [Ehrlichia canis str. Jake]
Length = 279
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 16/275 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------ 54
+ + +Y A+ V+ DG A ++S LLS+FPF+VF L +
Sbjct: 2 LIKVARCFIKCVYYAMVDMVKHDGIEHAGYLSFIILLSIFPFLVFLMALVSNVAQLLNYY 61
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+I ++ P I I I ++++ P L T++ + + SS+ VE +R
Sbjct: 62 DISISEKLILLINDNVPSEIISGIMPRIQEIISGPPHSLLTLAIIGTVWTSSSAVEGIRT 121
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
LN+AYRV S+ RL+S L+ +VT+ I + +P+ + +
Sbjct: 122 ILNKAYRVSSPPSYIFRRLLSIFQFLMITVTITIAMVSIILLPVIYEMLDRNLAYF---- 177
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + L LF + ++ +P K +++++PG + W + +FT YI T
Sbjct: 178 ------KYAISELMLFTSITLLYFIVPNIKQNLINVVPGAMLVTFLWTCSSFVFTWYIKT 231
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
F + +Y LA I+ L+F Y+L +FFI GAE N
Sbjct: 232 FQQLNIIYGSLAGIIASLLFFYILSIFFIYGAEFN 266
>gi|332188562|ref|ZP_08390281.1| hypothetical protein SUS17_3692 [Sphingomonas sp. S17]
gi|332011406|gb|EGI53492.1| hypothetical protein SUS17_3692 [Sphingomonas sp. S17]
Length = 323
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 53/253 (20%), Positives = 103/253 (40%), Gaps = 1/253 (0%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ AL+++FPF + A L G ++ P ++ +
Sbjct: 49 NDGFIHAGNLAYLALMTLFPFFITTAALLSLFGQSNETQHAVESFLHVLPPDVSDLLRKP 108
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I VLA L + L + +E +R +RAY V +++ +RL S ++
Sbjct: 109 IADVLAARTGSLLWLGGLVGLWTVGGFIETIRDIFHRAYGVKATAAFWKSRLSSTLVIVA 168
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
+ V ++ V + A ++ + P ++ + R + + + P
Sbjct: 169 SVVIALLSFLVAGVLTAAEQFIYRLVPFAQDVAGWVGLSRFIPGAVMFGALYMLFYSVTP 228
Query: 202 AA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ + PG +FT WV L + Y Y LA ++ L+F Y++G+
Sbjct: 229 SKYRESDCPKWPGALFTAAWWVSMTALLPVVLSQLGGYDLTYGSLAGVVVMLLFFYLIGL 288
Query: 261 FFILGAELNASMI 273
+ GA LNA++
Sbjct: 289 GLVFGAHLNAALA 301
>gi|56416749|ref|YP_153823.1| hypothetical protein AM555 [Anaplasma marginale str. St. Maries]
gi|222475113|ref|YP_002563529.1| hypothetical protein AMF_412 [Anaplasma marginale str. Florida]
gi|56387981|gb|AAV86568.1| hypothetical protein AM555 [Anaplasma marginale str. St. Maries]
gi|222419250|gb|ACM49273.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 295
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 12/266 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-----FLGAHQFVPTV 62
AI F DG + +++ LL+ FPF+VF + F+ +
Sbjct: 29 FLRCAGLAIADFRRHDGLVYSGYLAFIFLLATFPFLVFFTAMTSTALNVLDKHEDFLQGL 88
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV
Sbjct: 89 VTSLLSELPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRV 148
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + R++S L+ + ++ V +P+ L + + + LG + +
Sbjct: 149 SAPPPYILGRMLSILQFLVIVLVMMFSVLFIVFVPIVLDVLDQKWGYLGYI-------KY 201
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + L + + ++ +P + +I ILPG + I W + F+ Y+ F TMY
Sbjct: 202 TLSEVILCLSVALLYFMVPNTRQRIGVILPGAVVVTILWTASSFTFSWYLSNFRVLHTMY 261
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
L+ I+ ++F Y+L +FFI GAEL
Sbjct: 262 GNLSGIIASMLFFYILSIFFIYGAEL 287
>gi|182683583|ref|YP_001835330.1| ribonuclease BN, putative [Streptococcus pneumoniae CGSP14]
gi|182628917|gb|ACB89865.1| ribonuclease BN, putative [Streptococcus pneumoniae CGSP14]
Length = 291
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 18 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVL 75
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 76 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLIS 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S + F+ + + LA + ++ G + + LF
Sbjct: 136 HQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 195
Query: 191 IGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP + KI LPG F + + LF+ Y+ + + L S+
Sbjct: 196 AILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 255
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 256 LVVMMFWFILIAKIVILGAVINASMQSLK 284
>gi|149372594|ref|ZP_01891706.1| ribonuclease BN, putative [unidentified eubacterium SCB49]
gi|149354637|gb|EDM43201.1| ribonuclease BN, putative [unidentified eubacterium SCB49]
Length = 313
Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 115/262 (43%), Gaps = 1/262 (0%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
++ AS I+ S +++FPF++F NL ++ F + + A P A
Sbjct: 46 IIKGSFSPRASSIAYSFFVALFPFLLFILNLLPYIKIEGFQTRFLIFIEEALPAQTADLF 105
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
I + P GL + + + + ++NGV A + +Y V R ++ +F
Sbjct: 106 YPVIADIAVNPRGGLLSFVIILSLFLAANGVNAAFSAFEESYYVTLNRGFFKQYAYAFAV 165
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
LL ++ L+I V V + + + N I ++ ++ +++ + ++
Sbjct: 166 SLLLALLLIITVGVIVYGEFLINDLAGRA-YIENDFFWISLLQVSVFVVMVYVAVATLYY 224
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
F KI G + T + ++V LF YI FS Y+ +Y L +++ ++++++
Sbjct: 225 FGTRESRKIRFFSLGALITTLLFIVTTYLFGIYINNFSNYNELYGSLGALLIMMLYIWIN 284
Query: 259 GVFFILGAELNASMIIYYWRKK 280
+LG ELN ++ ++K
Sbjct: 285 ANLLLLGFELNITLFKLDVKRK 306
>gi|257069185|ref|YP_003155440.1| hypothetical protein Bfae_20430 [Brachybacterium faecium DSM 4810]
gi|256560003|gb|ACU85850.1| predicted membrane protein [Brachybacterium faecium DSM 4810]
Length = 388
Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 106/284 (37%), Gaps = 20/284 (7%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFGA 69
+ F+ + G A+ ++ +LS+ P ++ +LA L A Q ++D + A
Sbjct: 29 KRVLSEFLRDGGTDQAAKLTYFMVLSIAPTLLALFSLATLLLAGIKDQIADLLVDAINSA 88
Query: 70 WPEV---IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ + ++ G I A + +S ++A N Y V E
Sbjct: 89 AGGSGLGAEDAVRSTVNSLMGSSTGGTVALIIGIATALWSASAYIKAYGRVANHIYEVPE 148
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVA---------IPLALAYVRKF-FPALGNLL 174
R L + ++++ + P+A + + L +
Sbjct: 149 GRGPIRMNGTMLLLTLAMILGILLVMISLLLSESIVEGLLGPIASSIGAEGALSFLMSSF 208
Query: 175 LIIWNG-RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L IW + +L F L ++ P + I PG +F + V AV + Y+
Sbjct: 209 LPIWAWVKWPVILLIAFALLSLLYWGAPNIEKPFRFISPGGVFAILGIAVAAVALSIYMG 268
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
T + YS+ Y + IM L L+++ + I+GAE++A
Sbjct: 269 TVAGYSS-YGAIGGIMAVLFALWVVNIVIIMGAEVDAEYERARE 311
>gi|227893136|ref|ZP_04010941.1| possible ribonuclease BN [Lactobacillus ultunensis DSM 16047]
gi|227865002|gb|EEJ72423.1| possible ribonuclease BN [Lactobacillus ultunensis DSM 16047]
Length = 307
Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 119/270 (44%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + + + + I+ L S+FP I+ N+ + +
Sbjct: 13 KFILTLRTTLSQGEIFDSSIVIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAKYLNVV 70
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--- 126
+P+ +++ I + +L + G + + A + SN V A+R+ NR Y V ++
Sbjct: 71 FPDQVSEFIMPIVNSLLKTTSTGYMSFGIILAVWSFSNLVNAIRLGENRLYGVHQVELKL 130
Query: 127 ---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
++ TR+I+ + L + +S V V L ++ F N + I++ R
Sbjct: 131 SIVNFIWTRMITIAFTALMIIIFTAVSIVLVFGQQLLNVLQPIFHLPVNEINKIFSYRYP 190
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + + + +++ LP K K I PGVI T I W+ + LF+ Y+ F Y
Sbjct: 191 VVILVMVLAVSYLNYVLPNIKLKKRVIWPGVITTVIGWLGLSFLFSFYLHNFPITWENYG 250
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + + +++L + V F++G +NA++I
Sbjct: 251 IVGTFIIFMLWLNIAAVLFLVGVAVNAAII 280
>gi|24379941|ref|NP_721896.1| hypothetical protein SMU.1555c [Streptococcus mutans UA159]
gi|290580080|ref|YP_003484472.1| hypothetical protein SmuNN2025_0554 [Streptococcus mutans NN2025]
gi|24377923|gb|AAN59202.1|AE014987_1 conserved hypothetical protein [Streptococcus mutans UA159]
gi|254996979|dbj|BAH87580.1| hypothetical protein [Streptococcus mutans NN2025]
Length = 310
Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 110/273 (40%), Gaps = 5/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + +E++ + + ++ +L++FPF++ ANL +L ++ +
Sbjct: 12 QFVQNFLEYYKSSEMDLSSIAVAYYLILTIFPFLILLANLFPYLHID--TSELLSFMKNN 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + + + P+ L ++ + + S + L+ S+N++Y + R
Sbjct: 70 LPEQLYENTSGIVRGIFNKPSTSLLWLAIVTGLWTMSKSLTFLQKSMNKSYGIQNHRDLI 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ ++ LL L + + L ++ +L I+ N T
Sbjct: 130 LGHIVGIFSSLLVIFFLALAIMLSTFGKTVLTFLYHNSFLNQDLYDILMNLTQPVTAAIF 189
Query: 190 FIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F+ L ++ LP + KI ILPG IFT + LF YI + S+
Sbjct: 190 FVALGVLYYILPNVRIKKIRYILPGTIFTSFLFFTMTSLFGTYINYATASMENLRVFGSV 249
Query: 249 --MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ + ILGA LNAS Y ++
Sbjct: 250 TLFVLMLWFIVFARILILGAVLNASYQKKYVKE 282
>gi|146319270|ref|YP_001198982.1| hypothetical protein SSU05_1616 [Streptococcus suis 05ZYH33]
gi|146321474|ref|YP_001201185.1| hypothetical protein SSU98_1627 [Streptococcus suis 98HAH33]
gi|145690076|gb|ABP90582.1| Predicted membrane protein [Streptococcus suis 05ZYH33]
gi|145692280|gb|ABP92785.1| Predicted membrane protein [Streptococcus suis 98HAH33]
gi|292558903|gb|ADE31904.1| RNase BN [Streptococcus suis GZ1]
Length = 313
Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 113/262 (43%), Gaps = 5/262 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ D + ++ L+S+FP ++ ANL + V ++ VV P+ +
Sbjct: 23 FFSFYRSADSDVTSVAVAYYLLISIFPILLTLANLLPYYPFD--VDMILSVVAEFVPDKL 80
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ I VL P+ IS L + S + L+ + N+AY + E R + I LI
Sbjct: 81 YPSVSSFITSVLTKPSSSWLGISILTTLWTLSRSMTILQKAFNKAYGINEHRDFIIGHLI 140
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ V +++ + +Y+ K P L + + ++ALF L+
Sbjct: 141 GIFLGIGLQVIILLSITLLTFGQAVFSYINKLVPIEDAWLKGLLSQTQLVGLMALFTALV 200
Query: 195 FVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM--TC 251
++ FLP + K+ + PG +F ++ LF+ Y+ ++ + + +++
Sbjct: 201 MLYFFLPNVRIKKVRYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLDFRIVTAVVFLVF 260
Query: 252 LVFLYMLGVFFILGAELNASMI 273
+++ + I+GA +NA++
Sbjct: 261 MLWFIFMAQVLIIGAMINATVQ 282
>gi|55823460|ref|YP_141901.1| tRNA-processing ribonuclease BN [Streptococcus thermophilus
CNRZ1066]
gi|55739445|gb|AAV63086.1| tRNA-processing ribonuclease BN,putative [Streptococcus
thermophilus CNRZ1066]
Length = 319
Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 115/275 (41%), Gaps = 5/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + H+ + + ++ +L+VFP IV AN+ +L ++
Sbjct: 13 KLQWRPFQVYLSHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYLNID--TTDLLKF 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ P + I + + P+ L +S+L + + +L+ ++++ Y E
Sbjct: 71 MNEHLPKHFYAPAANVIQDIFSTPSGRLLGVSSLTGFWTMIKSLSSLQKAIDKVYGASEH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +I+ +I L+ L + + I L + + +P NL +I N +
Sbjct: 131 RDVFISHIIGGLLSLVILFLLTFALMLSIIIQSVLRVINQTYPIGSNLTQLILNSIQPLS 190
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F+G++ ++ LP K KI I+PG IFT + + LF Y++ +
Sbjct: 191 VAVVFLGMMVLYFILPNVKIRKIRYIMPGTIFTTLVIGYLSNLFGTYVIHTLSRLVDIKL 250
Query: 245 LASIM--TCLVFLYMLGVFFILGAELNASMIIYYW 277
SIM +++ L I GA NA+
Sbjct: 251 FGSIMIFIFMLWFIFLARILIFGAIFNATYQELKQ 285
>gi|126661844|ref|ZP_01732843.1| hypothetical protein FBBAL38_00795 [Flavobacteria bacterium BAL38]
gi|126625223|gb|EAZ95912.1| hypothetical protein FBBAL38_00795 [Flavobacteria bacterium BAL38]
Length = 307
Score = 152 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 54/271 (19%), Positives = 118/271 (43%), Gaps = 2/271 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++DI+ + AS I+ S +++FPF +F NL F+ F + V
Sbjct: 35 LYDILEMYVLGIFRGAFSYRASAIAFSFFMALFPFALFILNLIPFIPLENFQADFLKFVE 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I + ++ +GL + + + +NG+ A+ + + R
Sbjct: 95 NGVPPNTYEAIEMILKDIMGTSHQGLLSSGFILSILLMTNGINAILGGFEMSAHITITRG 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ IS L+ S+ L+I V + + + + ++ +I W+ R +L
Sbjct: 155 FFKQYFISLAISLVLSLILIITVAAIVITEVMIQKI-NVHGYVADVSVIEWS-RYGFIIL 212
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ I ++ F SKI I G + T I ++ + +F Y+ F+ Y+ +Y + +
Sbjct: 213 MILITTSILYKFGAKETSKISFISYGAVLTTILIILSSYIFGVYVEKFARYNELYGSIGT 272
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ + ++++ + +LG ELNA++ +
Sbjct: 273 LLVLMFYIWINCMVLLLGFELNATISKLKRK 303
>gi|269795226|ref|YP_003314681.1| hypothetical protein Sked_19220 [Sanguibacter keddieii DSM 10542]
gi|269097411|gb|ACZ21847.1| predicted membrane protein [Sanguibacter keddieii DSM 10542]
Length = 463
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 56/293 (19%), Positives = 112/293 (38%), Gaps = 23/293 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVI 63
++ +A+ ++ AL+S+ P + G L Q TV+
Sbjct: 120 LVVRCARRISHVRVTGLAAEMTYYALISILPLVTAFGAALGSLERFVGQERVEQIQSTVV 179
Query: 64 DVVFGAWPEVI-AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
D V + I A + + +L G+ + A + +S A +L+ AY V
Sbjct: 180 DQVVRVFDHQIGADVLAPLVEGLLGQERTGVAIGGTVVALWLASRMFRAAIRALDDAYTV 239
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA--LAYVRKFFPALGNLLLIIWNG 180
E RS+ ++ L A +TLV++ + V PL + F LG++ W
Sbjct: 240 EERRSFVQQVMLGLALALGAVLTLVVLLSMLVIGPLLGGGEEIANLF-GLGSVFTSAWEL 298
Query: 181 RIYATMLALFIGLI-FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY- 238
+ ++ L +G + ++ + P + LPG + I +V A+ F Y+ +
Sbjct: 299 LRWPAVVLLAVGFLALLYRYGPNVSTTWQRCLPGAVGGTIGLLVVALGFQVYLGAAGSSV 358
Query: 239 ----------STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ + +I+ +++L++ + + G LNA + P
Sbjct: 359 PGEDAATQTVAIAAQTIGAILAAVLWLWVSSIVILAGGVLNAEVQRMRGTTPP 411
>gi|255004219|ref|ZP_05279020.1| hypothetical protein AmarV_02438 [Anaplasma marginale str.
Virginia]
Length = 281
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 12/266 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-----FLGAHQFVPTV 62
AI F DG + +++ LL+ FPF+VF + F+ +
Sbjct: 15 FLRCAGLAIADFRRHDGLVYSGYLAFIFLLATFPFLVFFTAMTSTALNVLDKHEDFLQGL 74
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV
Sbjct: 75 VTSLLSELPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRV 134
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + R++S L+ + ++ V +P+ L + + + LG + +
Sbjct: 135 SAPPPYILGRMLSILQFLVIVLVMMFSVLFIVFVPIVLDVLDQKWGYLGYI-------KY 187
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + L + + ++ +P + +I ILPG + I W + F+ Y+ F TMY
Sbjct: 188 TLSEVILCLSVALLYFMVPNTRQRIGVILPGAVVVTILWTASSFTFSWYLSNFRVLHTMY 247
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
L+ I+ ++F Y+L +FFI GAEL
Sbjct: 248 GNLSGIIASMLFFYILSIFFIYGAEL 273
>gi|307706878|ref|ZP_07643680.1| ribonuclease BN-like family protein [Streptococcus mitis SK321]
gi|307617751|gb|EFN96916.1| ribonuclease BN-like family protein [Streptococcus mitis SK321]
Length = 286
Score = 151 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 117/269 (43%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + VV
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VSNFLKVVNEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + I +VL P+ GL + + L+A + S + L+ + N+AY V + R
Sbjct: 71 PDTMYDVVAKIITEVLTQPSTGLLSFAVLSALWTFSKSMNFLQKAFNKAYGVAKNRGMIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + + F+ V + L ++ ++ + L + + +F
Sbjct: 131 HQLMSLFVSFGLQILFALALFLSVFGRMLLNLIKSYWKSDSPLFDYLQDLTGPLVYALIF 190
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA--GLAS 247
L+ ++ FLP K +I S+LPG F ++ V+ +F+ Y+ + +
Sbjct: 191 AILVMLYYFLPNVKVRRIRSVLPGSAFVMLTLVLLLNIFSVYVNNYVNHLVDVRFFSSVV 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ + + ++ I+GA +NAS+
Sbjct: 251 VVVMMFWFILIAKILIVGAVINASVQSLK 279
>gi|307709513|ref|ZP_07645969.1| ribonuclease BN-like family protein [Streptococcus mitis SK564]
gi|307619732|gb|EFN98852.1| ribonuclease BN-like family protein [Streptococcus mitis SK564]
Length = 286
Score = 151 bits (383), Expect = 8e-35, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 111/269 (41%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LVKAFLYYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S + F+ + + L + ++ G + + T LF
Sbjct: 131 HQMVSLLVSFGLQLLFAFALFLSLFGQMILDLLAHYWTKDGIIYQALQGLAGPLTYALLF 190
Query: 191 IGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP + KI LPG F + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NAS+
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASVQSLK 279
>gi|313890733|ref|ZP_07824358.1| YihY family protein [Streptococcus pseudoporcinus SPIN 20026]
gi|313120834|gb|EFR43948.1| YihY family protein [Streptococcus pseudoporcinus SPIN 20026]
Length = 319
Score = 151 bits (383), Expect = 9e-35, Method: Composition-based stats.
Identities = 55/274 (20%), Positives = 116/274 (42%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ + ++HF + + ++ +L+VFP I+ AN+ +L + +++++
Sbjct: 17 YEPVQAFMKHFASAEMDLSSIAVAYYLILTVFPLIIIAANIFPYLNID--ISDLLNLMKQ 74
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ P I KP + + + PA + ++ LA + S + +L+ ++N+AY + R +
Sbjct: 75 SLPVDIYKPAASIVTNIFSKPAGSILGMATLAGLWTMSRSLTSLQKAINKAYGASQHRDF 134
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ +I + L + A+ + K + N+ + T++
Sbjct: 135 LVSHIIGLLISVFILFLLTFVLIFSTFSKAAIQVIDKHYHLSDNITSLFLLLIQPITIVI 194
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+FIG++ ++ LP K KI ILPG T + + +Y+V S
Sbjct: 195 IFIGIMVLYFLLPNVKIRKIRYILPGTFLTAFVMTFMSNMLANYVVHSVERMVDIKMFGS 254
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
IM +++ L I GA NA+ K
Sbjct: 255 IMIFIIMLWFIFLARILIFGAICNATYQELDQGK 288
>gi|84500374|ref|ZP_00998623.1| ribonuclease BN [Oceanicola batsensis HTCC2597]
gi|84391327|gb|EAQ03659.1| ribonuclease BN [Oceanicola batsensis HTCC2597]
Length = 284
Score = 151 bits (383), Expect = 9e-35, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 109/262 (41%), Gaps = 9/262 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ E++ + +A+ ++ +L++FP + + G L + ++++ P +
Sbjct: 13 IVAAIAEKNLFLIAAGVAFYGMLALFPAMAAIIAIWGLLSDPNVLVEQLELIRNILPVEV 72
Query: 75 AKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I ++I + L + A + + +GV AL + LN + R
Sbjct: 73 TRIIENQINALSTASGDKLGWAGLVSMMVAIWSARSGVAALMLGLNAIHG-RANRGSLRH 131
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L + L V+ V P+ A++ P +++ R A + L
Sbjct: 132 YLTALVLTLALLGVSVVTLSAVVIAPIIFAFI----PLGPVTAILVEAFRWVAAIFVLMA 187
Query: 192 GLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
GL V+ F P + ++ + PG + W V + F+ Y+ F+ Y+ +Y + + +
Sbjct: 188 GLAVVYRFGPNNRGERMKWVTPGAVMAVALWAVASYGFSLYLANFANYNEVYGSIGAAVA 247
Query: 251 CLVFLYMLGVFFILGAELNASM 272
L++L++ +LGA +N +
Sbjct: 248 MLMWLFISAFLVLLGAVVNLEL 269
>gi|293365731|ref|ZP_06612440.1| ribonuclease BN [Streptococcus oralis ATCC 35037]
gi|306829784|ref|ZP_07462973.1| possible ribonuclease BN [Streptococcus mitis ATCC 6249]
gi|307703672|ref|ZP_07640614.1| ribonuclease BN-like family protein [Streptococcus oralis ATCC
35037]
gi|331266081|ref|YP_004325711.1| ribonuclease BN, putative [Streptococcus oralis Uo5]
gi|291316099|gb|EFE56543.1| ribonuclease BN [Streptococcus oralis ATCC 35037]
gi|304428135|gb|EFM31226.1| possible ribonuclease BN [Streptococcus mitis ATCC 6249]
gi|307623079|gb|EFO02074.1| ribonuclease BN-like family protein [Streptococcus oralis ATCC
35037]
gi|326682753|emb|CBZ00370.1| ribonuclease BN, putative [Streptococcus oralis Uo5]
Length = 286
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 121/272 (44%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLMIMVNILPYFQIP--VSNFLLTIKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + + +VL P+ GL + + L+A + S ++ L+ + N+AY V + R
Sbjct: 71 PDTVYDVVAKIVREVLTQPSTGLLSFAVLSALWTFSKSMDFLQKAFNKAYGVTKSRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + + F+ + + L ++ ++ + L + + +F
Sbjct: 131 HQLMSLLVSFGLQILFALALFLSMFGRMLLNLLKTYWQSDSPLFSYLQDFTGPLVYALIF 190
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L+ ++ FLP K+ +I +LPG +F ++ + +F+ Y+ ++ + +SI+
Sbjct: 191 AILVMIYYFLPKVKAPRIRYVLPGSVFVLLTLIFLLNIFSVYVNSYVNHLVDVRFFSSII 250
Query: 250 --TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + ++ I+GA +NAS+ K
Sbjct: 251 VVVMMFWFILIAKILIIGAVINASVQSLKDPK 282
>gi|116516563|ref|YP_816069.1| ribonuclease BN, putative [Streptococcus pneumoniae D39]
gi|116077139|gb|ABJ54859.1| ribonuclease BN, putative [Streptococcus pneumoniae D39]
Length = 286
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S F+ + + LA + ++ G + + LF
Sbjct: 131 HQMLSLLVSFGLQFLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 190
Query: 191 IGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP + KI LPG F + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGVLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASMQSLK 279
>gi|332523215|ref|ZP_08399467.1| YihY family protein [Streptococcus porcinus str. Jelinkova 176]
gi|332314479|gb|EGJ27464.1| YihY family protein [Streptococcus porcinus str. Jelinkova 176]
Length = 319
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 116/274 (42%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ + ++HF + + ++ +L+VFP I+ AN+ +L + +++++
Sbjct: 17 YEPVQAFMKHFASAEMDLSSIAVAYYLILTVFPLIIIAANIFPYLNID--ISDLLNLMKQ 74
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ P I KP + + + PA + ++ +A + S + +L+ ++N+AY + R +
Sbjct: 75 SLPVDIYKPAASIVTNIFSKPAGSILGMATVAGLWTMSRSLTSLQKAINKAYGASQHRDF 134
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ +I + L + A+ + K + N+ + T++
Sbjct: 135 LVSHIIGLLISVFILFLLTFVLIFSTFSKAAIQVIDKHYHLSDNITSLFLLLIQPITIVI 194
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+FIG++ ++ LP K KI ILPG T + + +Y+V S
Sbjct: 195 IFIGIMVLYFLLPNVKIRKIRYILPGTFLTAFVMTFMSNMLANYVVHSVERMVDIKMFGS 254
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
IM +++ L I GA NA+ K
Sbjct: 255 IMIFIIMLWFIFLARILIFGAICNATYQELDQGK 288
>gi|148992234|ref|ZP_01821957.1| ribonuclease BN, putative [Streptococcus pneumoniae SP9-BS68]
gi|168488338|ref|ZP_02712537.1| ribonuclease BN [Streptococcus pneumoniae SP195]
gi|221231473|ref|YP_002510625.1| ribonuclease BN-like family protein [Streptococcus pneumoniae ATCC
700669]
gi|225854183|ref|YP_002735695.1| ribonuclease BN [Streptococcus pneumoniae JJA]
gi|298230973|ref|ZP_06964654.1| ribonuclease BN [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254128|ref|ZP_06977714.1| ribonuclease BN [Streptococcus pneumoniae str. Canada MDR_19A]
gi|147928860|gb|EDK79872.1| ribonuclease BN, putative [Streptococcus pneumoniae SP9-BS68]
gi|183572912|gb|EDT93440.1| ribonuclease BN [Streptococcus pneumoniae SP195]
gi|220673933|emb|CAR68442.1| ribonuclease BN-like family protein [Streptococcus pneumoniae ATCC
700669]
gi|225723978|gb|ACO19831.1| ribonuclease BN [Streptococcus pneumoniae JJA]
gi|332074462|gb|EGI84938.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA17570]
Length = 286
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLCFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S + F+ + + LA + ++ G + + LF
Sbjct: 131 HQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 190
Query: 191 IGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP KI LPG F + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNISNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASMQSLR 279
>gi|315613448|ref|ZP_07888356.1| possible ribonuclease BN [Streptococcus sanguinis ATCC 49296]
gi|315314444|gb|EFU62488.1| possible ribonuclease BN [Streptococcus sanguinis ATCC 49296]
Length = 286
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 121/272 (44%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLMIMVNILPYFQIP--VSNFLLTIKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + + +VL P+ GL + + L+A + S ++ L+ + N+AY V + R
Sbjct: 71 PDTVYDVVAKIVREVLTQPSTGLLSFAVLSALWTFSKSMDFLQKAFNKAYGVTKSRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + + F+ + + L ++ ++ + L + + +F
Sbjct: 131 HQLMSLLVSFGLQILFALALFLSMFGRMLLNLLKTYWQSDSPLFSYLQDFTGPLVYALIF 190
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L+ ++ FLP K+ +I +LPG +F ++ + +F+ Y+ ++ + +SI+
Sbjct: 191 AILVMIYYFLPKVKAPRIRYVLPGSVFVLLTLIFLLNIFSVYVNSYVNHLVDVRFFSSII 250
Query: 250 --TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + ++ I+GA +NAS+ K
Sbjct: 251 VVVMMFWFILIAKILIIGAVINASVQSLKDPK 282
>gi|307243532|ref|ZP_07525680.1| YihY family protein [Peptostreptococcus stomatis DSM 17678]
gi|306493088|gb|EFM65093.1| YihY family protein [Peptostreptococcus stomatis DSM 17678]
Length = 283
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 109/268 (40%), Gaps = 1/268 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ I + + + F D ++ ++ ++ LS+FP ++F ++ V
Sbjct: 2 KLVKIYNENVKALVNQFNIADMYSRSAGVAYYLTLSIFPSLMFLMCAFAYMP-PIIGNFV 60
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P + + + + + L I+ L A + S V++L N AY
Sbjct: 61 ETAIRTNVPTGASNILLTIVDSAINNRSIRLLVITFLIAVWTFSKAVKSLIAGQNSAYNF 120
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS+ L + Y + + ++ V +R L LI R
Sbjct: 121 EETRSFIRLNLYVYLYAVAFFLAVIFAVVFLVYGGKFADIIRDRLDEFYLLTLIYNFIRF 180
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + + +F P KI LPG FT + WV+ ++ ++ YI FS Y +Y
Sbjct: 181 VIPIFFILLMFLNFFIFGPCKPIKIRQALPGACFTTVLWVILSIAYSFYIDKFSDYKEIY 240
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNA 270
+++I+ + ++Y+ + +G ++NA
Sbjct: 241 GNISTIIVLMTWIYLCSISITIGYKVNA 268
>gi|281491079|ref|YP_003353059.1| tRNA-processing ribonuclease BN [Lactococcus lactis subsp. lactis
KF147]
gi|281374837|gb|ADA64357.1| tRNA-processing ribonuclease BN [Lactococcus lactis subsp. lactis
KF147]
gi|326406113|gb|ADZ63184.1| tRNA-processing ribonuclease BN [Lactococcus lactis subsp. lactis
CV56]
Length = 301
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 60/282 (21%), Positives = 115/282 (40%), Gaps = 5/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + ++ + F + + ++ LL++FP + N+ FL +
Sbjct: 5 MKKVIQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHIN--TT 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + P + K I I +L GL ++S LA + S + AL++S+N+AY
Sbjct: 63 ALLSFLSEQLPSDVYKGIEPVINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R + ++R+I + L + L L V + FP +L + N
Sbjct: 123 EVFNHRDFIVSRIIGLAAGFAILLFLYFSIVLSTFGQLILEQVHRLFPFDDHLYRTLHNM 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A +A F+ L+ ++ LP K K+ +PG IF+ V Y+
Sbjct: 183 TLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRL 242
Query: 240 TMYAGLASIMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ +++ + I+GA LNA K
Sbjct: 243 DDLKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGK 284
>gi|149005772|ref|ZP_01829511.1| ribonuclease BN, putative [Streptococcus pneumoniae SP18-BS74]
gi|307126852|ref|YP_003878883.1| ribonuclease BN [Streptococcus pneumoniae 670-6B]
gi|147762712|gb|EDK69672.1| ribonuclease BN, putative [Streptococcus pneumoniae SP18-BS74]
gi|306483914|gb|ADM90783.1| ribonuclease BN [Streptococcus pneumoniae 670-6B]
gi|332077084|gb|EGI87546.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA17545]
Length = 286
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S + F+ + + LA + ++ G + + LF
Sbjct: 131 HQMLSLLVSFGLQILFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 190
Query: 191 IGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP + KI LPG F + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASMQSLK 279
>gi|194398139|ref|YP_002037313.1| ribonuclease BN [Streptococcus pneumoniae G54]
gi|194357806|gb|ACF56254.1| ribonuclease BN, putative [Streptococcus pneumoniae G54]
Length = 286
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S + F+ + + LA + ++ G + + LF
Sbjct: 131 HQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 190
Query: 191 IGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP KI LPG F + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNISNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASMQSLK 279
>gi|270292449|ref|ZP_06198660.1| putative ribonuclease BN [Streptococcus sp. M143]
gi|270278428|gb|EFA24274.1| putative ribonuclease BN [Streptococcus sp. M143]
Length = 294
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 114/272 (41%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + + D + ++ L+S+FP ++ N+ + + + +
Sbjct: 13 LLKAFLHFYQASDSELTSVAVAYYWLISIFPLLMIMVNILPYFQIP--ISNFLLTIKEFV 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + +VL P+ GL + + L+A + S ++ L+ + N+AY V + R
Sbjct: 71 PDTVYDVVAKIAREVLTQPSTGLLSFAVLSALWTFSKSMDFLQKAFNKAYGVAKSRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + + F+ + + L ++ ++ + + + LF
Sbjct: 131 HQLMSLLVSFGLQILFALALFLSMFGRMLLNLLKTYWQSDSPFFDYLQDFTGPLIYALLF 190
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L+ ++ FLP + +I + PG IF ++ V +F+ Y + + +SI+
Sbjct: 191 AILVMLYYFLPNVRVPRIRYVFPGSIFVLLTLVFLLNIFSVYFNNYVNHLVDVRFFSSII 250
Query: 250 --TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + ++ I+GA +NAS+ K
Sbjct: 251 VVVMMFWFILIAKILIIGAVINASVQSLKEPK 282
>gi|15900558|ref|NP_345162.1| ribonuclease BN, putative [Streptococcus pneumoniae TIGR4]
gi|148997263|ref|ZP_01824917.1| ribonuclease BN, putative [Streptococcus pneumoniae SP11-BS70]
gi|149002344|ref|ZP_01827286.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS69]
gi|149020271|ref|ZP_01835163.1| ribonuclease BN, putative [Streptococcus pneumoniae SP23-BS72]
gi|168482885|ref|ZP_02707837.1| ribonuclease BN [Streptococcus pneumoniae CDC1873-00]
gi|168487251|ref|ZP_02711759.1| ribonuclease BN [Streptococcus pneumoniae CDC1087-00]
gi|168492815|ref|ZP_02716958.1| ribonuclease BN [Streptococcus pneumoniae CDC3059-06]
gi|168575327|ref|ZP_02721263.1| ribonuclease BN [Streptococcus pneumoniae MLV-016]
gi|169833347|ref|YP_001694130.1| ribonuclease BN [Streptococcus pneumoniae Hungary19A-6]
gi|225858485|ref|YP_002739995.1| ribonuclease BN [Streptococcus pneumoniae 70585]
gi|225860648|ref|YP_002742157.1| ribonuclease BN [Streptococcus pneumoniae Taiwan19F-14]
gi|237650324|ref|ZP_04524576.1| ribonuclease BN, putative [Streptococcus pneumoniae CCRI 1974]
gi|237821691|ref|ZP_04597536.1| ribonuclease BN, putative [Streptococcus pneumoniae CCRI 1974M2]
gi|303254762|ref|ZP_07340863.1| ribonuclease BN, putative [Streptococcus pneumoniae BS455]
gi|303259930|ref|ZP_07345904.1| ribonuclease BN, putative [Streptococcus pneumoniae SP-BS293]
gi|303261335|ref|ZP_07347283.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS292]
gi|303264001|ref|ZP_07349922.1| ribonuclease BN, putative [Streptococcus pneumoniae BS397]
gi|303266315|ref|ZP_07352205.1| ribonuclease BN, putative [Streptococcus pneumoniae BS457]
gi|303268782|ref|ZP_07354570.1| ribonuclease BN, putative [Streptococcus pneumoniae BS458]
gi|307067275|ref|YP_003876241.1| hypothetical protein SPAP_0646 [Streptococcus pneumoniae AP200]
gi|14972130|gb|AAK74802.1| putative ribonuclease BN [Streptococcus pneumoniae TIGR4]
gi|147756963|gb|EDK64003.1| ribonuclease BN, putative [Streptococcus pneumoniae SP11-BS70]
gi|147759659|gb|EDK66650.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS69]
gi|147930573|gb|EDK81555.1| ribonuclease BN, putative [Streptococcus pneumoniae SP23-BS72]
gi|168995849|gb|ACA36461.1| ribonuclease BN [Streptococcus pneumoniae Hungary19A-6]
gi|172043652|gb|EDT51698.1| ribonuclease BN [Streptococcus pneumoniae CDC1873-00]
gi|183569882|gb|EDT90410.1| ribonuclease BN [Streptococcus pneumoniae CDC1087-00]
gi|183576826|gb|EDT97354.1| ribonuclease BN [Streptococcus pneumoniae CDC3059-06]
gi|183578570|gb|EDT99098.1| ribonuclease BN [Streptococcus pneumoniae MLV-016]
gi|225720351|gb|ACO16205.1| ribonuclease BN [Streptococcus pneumoniae 70585]
gi|225727432|gb|ACO23283.1| ribonuclease BN [Streptococcus pneumoniae Taiwan19F-14]
gi|301799695|emb|CBW32260.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
OXC141]
gi|301801520|emb|CBW34212.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
INV200]
gi|302598302|gb|EFL65347.1| ribonuclease BN, putative [Streptococcus pneumoniae BS455]
gi|302637469|gb|EFL67956.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS292]
gi|302638849|gb|EFL69310.1| ribonuclease BN, putative [Streptococcus pneumoniae SP-BS293]
gi|302641647|gb|EFL72006.1| ribonuclease BN, putative [Streptococcus pneumoniae BS458]
gi|302644126|gb|EFL74383.1| ribonuclease BN, putative [Streptococcus pneumoniae BS457]
gi|302646406|gb|EFL76632.1| ribonuclease BN, putative [Streptococcus pneumoniae BS397]
gi|306408812|gb|ADM84239.1| Predicted membrane protein [Streptococcus pneumoniae AP200]
gi|327390387|gb|EGE88728.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA04375]
gi|332075951|gb|EGI86417.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA41301]
gi|332203816|gb|EGJ17883.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA47368]
Length = 286
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S + F+ + + LA + ++ G + + LF
Sbjct: 131 HQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 190
Query: 191 IGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP + KI LPG F + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASMQSLK 279
>gi|301793838|emb|CBW36231.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
INV104]
gi|332204674|gb|EGJ18739.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA47901]
Length = 286
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLCFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S + F+ + + LA + ++ G + + LF
Sbjct: 131 HQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 190
Query: 191 IGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP + KI LPG F + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASMQSLK 279
>gi|225856351|ref|YP_002737862.1| ribonuclease BN [Streptococcus pneumoniae P1031]
gi|225724776|gb|ACO20628.1| ribonuclease BN [Streptococcus pneumoniae P1031]
Length = 286
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLCFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S + F+ + + LA + ++ G + + LF
Sbjct: 131 HQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 190
Query: 191 IGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP KI LPG F + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNISNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASMQSLK 279
>gi|331091481|ref|ZP_08340319.1| hypothetical protein HMPREF9477_00962 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404037|gb|EGG83587.1| hypothetical protein HMPREF9477_00962 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 271
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 3/249 (1%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ A A+ + +LS+ P I+ L + + V+ V P+ I I
Sbjct: 17 NDHTSAYAAMSAFFFVLSLIPIILLLLTLVQYTSLTKV--DVMSAVAQVVPDSITPTILA 74
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ QV + + I+ L A + + GV A+ LN Y E R+++ R+ + Y +
Sbjct: 75 IVNQVY-NQSAAVIPITILVALWSAGRGVLAVTSGLNWIYDSRETRNYFYLRIRATFYTV 133
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L V +V+ V +V P ++ + R A AL + + ++ FL
Sbjct: 134 LFIVVIVLTLVVLGFGNSISLFVEAHIPLASHITKFMIEIRTIAAFFALLVFSLCIYKFL 193
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P + K +S LPG +FT + W++ + + Y+ F + MY L +I+ +++LY
Sbjct: 194 PNRRDKFLSQLPGSLFTSVGWLLTSFFVSKYMEIFKGFEDMYGSLTTIVLIMLWLYFSMY 253
Query: 261 FFILGAELN 269
+LG ++N
Sbjct: 254 IMLLGGKVN 262
>gi|163815794|ref|ZP_02207165.1| hypothetical protein COPEUT_01974 [Coprococcus eutactus ATCC 27759]
gi|158448935|gb|EDP25930.1| hypothetical protein COPEUT_01974 [Coprococcus eutactus ATCC 27759]
Length = 365
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 57/276 (20%), Positives = 121/276 (43%), Gaps = 9/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ I++ + + ++ A A+ + LLS+FP + +L +
Sbjct: 12 MKKRAVILYHKLRLFMAEMNKDQVSAFAAQSAFFLLLSLFPLAMTLLTFVKYLPFTEV-- 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRA 119
V+++V +PE I ++ + + T +S L + +S G A+ L
Sbjct: 70 QVVEIVRELFPEEINSNFEFMFAEIFNSRSSLIATAVSILLTVWSASKGTMAIGRGLTFM 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV------RKFFPALGNL 173
+ ++++ R I Y L+ V +V + +++ + ++ + + F + +
Sbjct: 130 TGKEDSANYFLRRAIHTLYTLIFCVMIVAVMVIYILGDVVVSKILVRLDSVEGFQLVDTV 189
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I+ +I LF ++ + LP K +I + +PG FT I W++ + + YI
Sbjct: 190 ADILSIIKIAFAPTVLFGVMLVAYWALPVGKVRIKTAMPGAAFTTILWMLLSFGVSSYIN 249
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ MY LAS++ ++LYM ++GAE+N
Sbjct: 250 LVGINTYMYGSLASVILLALWLYMCMYVMLIGAEIN 285
>gi|312874248|ref|ZP_07734282.1| YihY family protein [Lactobacillus iners LEAF 2052A-d]
gi|311090318|gb|EFQ48728.1| YihY family protein [Lactobacillus iners LEAF 2052A-d]
Length = 306
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 107/260 (41%), Gaps = 8/260 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM------RSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQQSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F T Y + + + L
Sbjct: 199 NTYINYTIPNIGMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGTRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASM 272
++L + + F++G LNA++
Sbjct: 259 MWLNLAAILFLIGVCLNATI 278
>gi|325912154|ref|ZP_08174552.1| YihY family protein [Lactobacillus iners UPII 143-D]
gi|325476104|gb|EGC79272.1| YihY family protein [Lactobacillus iners UPII 143-D]
Length = 306
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 107/260 (41%), Gaps = 8/260 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM------RSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQHSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F T Y + + + L
Sbjct: 199 NTYINYTIPNIGMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGTRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASM 272
++L + + F++G LNA++
Sbjct: 259 MWLNLAAILFLIGVCLNATI 278
>gi|94497190|ref|ZP_01303762.1| putative ribonuclease protein [Sphingomonas sp. SKA58]
gi|94423295|gb|EAT08324.1| putative ribonuclease protein [Sphingomonas sp. SKA58]
Length = 303
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 107/266 (40%), Gaps = 9/266 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I+ +++ ++ A LS+ P ++ G +G Q V + +
Sbjct: 23 WQILKRVYGKLSTNHISLLSAGVAYYAFLSIAPLLLAVVLTYGLIGDPQLVADNVRSLIT 82
Query: 69 AWPEVIAKPITDEILQVLAV--PAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ AK I ++++ ++ PA GL + A Y ++ A +LN Y E
Sbjct: 83 VVPQEAAKLIYEQLMAIVTTTKPAVGLGLIFALAFAVYGATRASSATIEALNIIYEQTEA 142
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + +S G + V++ V V + ++ G + + + +
Sbjct: 143 RSIFAFYRVSLGIT----FSAVLVVVVGVLTASVIGFLETLTNGWGQIAIFLTKAITWIV 198
Query: 186 MLALF-IGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ ++ F P K++ + G + + W++ + + Y+ F Y+ Y
Sbjct: 199 AGMFASLIFALIYRFGPHRRKARWRWLTAGSVTATVLWLLSTLAVSFYVSKFGNYNETYG 258
Query: 244 GLASIMTCLVFLYMLGVFFILGAELN 269
L +++ ++LY+ +LGA+LN
Sbjct: 259 SLGAVVVLQLWLYVSAFVVLLGAQLN 284
>gi|312872994|ref|ZP_07733054.1| YihY family protein [Lactobacillus iners LEAF 2062A-h1]
gi|311091516|gb|EFQ49900.1| YihY family protein [Lactobacillus iners LEAF 2062A-h1]
Length = 306
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 107/260 (41%), Gaps = 8/260 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM------RSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQHSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F T Y + + + L
Sbjct: 199 NTYINYTIPNIGMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGTRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASM 272
++L + + F++G LNA++
Sbjct: 259 MWLNLAAILFLIGVCLNATI 278
>gi|168492268|ref|ZP_02716411.1| ribonuclease BN [Streptococcus pneumoniae CDC0288-04]
gi|183573531|gb|EDT94059.1| ribonuclease BN [Streptococcus pneumoniae CDC0288-04]
Length = 286
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 111/269 (41%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S + F+ + + LA + ++ G + + LF
Sbjct: 131 HQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYAFLF 190
Query: 191 IGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP + KI LPG F + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASMQSLK 279
>gi|299143561|ref|ZP_07036641.1| YihY family protein [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518046|gb|EFI41785.1| YihY family protein [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 311
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 64/276 (23%), Positives = 130/276 (47%), Gaps = 9/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + + I FD + F E +++ ++ +LS+FPF++ N+ F +
Sbjct: 13 LNKNYVIFFD---KFLYRFAEHRIVEISASLAYFLILSIFPFLIALLNIINFTNFL-YSD 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+I+ + PE I K + I ++ + + LF+IS L + +SNG + + ++N AY
Sbjct: 69 NIIEAL-SYLPEDITKIAMNFIKEIYSGSSGSLFSISVLLGLWSASNGFKKIIKNINLAY 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E R T+L+S + + + ++++ V + + + ++ +
Sbjct: 128 GFSEKRGILKTKLLSLLFTIALIIMILLLLLTQVFGETIINMLINYVGLGEDITYLWHIL 187
Query: 181 RIYATMLALFIGLIFVHLFLPAAK----SKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ +FI + V+ + P K ILPG IF+ IS V LF +Y+ F+
Sbjct: 188 SFIIPFIYMFITFLLVYKYSPGTDTRDLLKFSLILPGAIFSTISSVFATNLFGYYVGNFA 247
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
YS Y L I+ L++L+++ + ++G E+NA++
Sbjct: 248 KYSVTYGSLGGIIILLIWLWLMSMIILMGGEINATL 283
>gi|94971696|ref|YP_593744.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
gi|94553746|gb|ABF43670.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
Length = 296
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 116/273 (42%), Gaps = 8/273 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
MR++ + ++ A +H D +A+A + SA+L++FP ++ A+ FV
Sbjct: 1 MRDFLDHLRRALWRAFQH----DAFAVAKGAAYSAILTLFPAVLVVASTLTLSHTTAAFV 56
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V PE A + + +P K L T +A+ + ++ + + A
Sbjct: 57 REISYAVGRILPEGTASAVQEYFEGEHPIPMKFLIT-TAILTLWTATGVMISWMEGFRNA 115
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIW 178
Y++ + R+++ VL+A + SF+ ++ LG +L++W
Sbjct: 116 YQLQKTWGLIQERMVAISLVLMAGGPMAFASFLVAFGLQIENWMIFHAGRELGMYILLMW 175
Query: 179 N-GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ R + + ++ +LPG + W VLF YI F+
Sbjct: 176 SLVRWLIATVTSIAVIALIYHNGVPRTQPWHRVLPGAVLATAMWFGSTVLFGWYIRNFAH 235
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
Y +Y + + + L++LY++ + ++GAE NA
Sbjct: 236 YDVIYGSVGTAIALLIWLYLISMVVLVGAEFNA 268
>gi|169333779|ref|ZP_02860972.1| hypothetical protein ANASTE_00163 [Anaerofustis stercorihominis DSM
17244]
gi|169259628|gb|EDS73594.1| hypothetical protein ANASTE_00163 [Anaerofustis stercorihominis DSM
17244]
Length = 295
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 114/276 (41%), Gaps = 5/276 (1%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
I +++ E+ + A+ + + S P I+ L +L Q +I
Sbjct: 2 NLYQFLKDIKSSLDKLSEDFIYTFAAQSAFFMMFSFVPLIMIIVLLVQYLPLTQ--EELI 59
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ +P+ +A ITD + + + ++ L + +S G+ ++ LN Y+
Sbjct: 60 SISIHIFPQALAGFITDLFKGLYINYSGTVLLVTFLTLVWSASKGIYSISKGLNTIYKTK 119
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R++ R +S Y + + + + + + +++ +G+L N
Sbjct: 120 DERNYIQIRGVSLLYTICFGLIFLSVIILLIFGINIAKFLQSELFFIGDL---HINYSYL 176
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L + LP K I+ LPG IF+ W++ + L++ YI S +Y
Sbjct: 177 GGFFLLLAIFLITFCVLPKRKCHILKELPGAIFSSAGWIIFSWLYSLYITKVGANSLIYG 236
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++++ +++LY+ LG ELN + Y +K
Sbjct: 237 SLSAVILFMLWLYICMYIIFLGGELNVVLQTYDIKK 272
>gi|126737832|ref|ZP_01753562.1| ribonuclease BN, putative [Roseobacter sp. SK209-2-6]
gi|126721225|gb|EBA17929.1| ribonuclease BN, putative [Roseobacter sp. SK209-2-6]
Length = 248
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 85/245 (34%), Positives = 137/245 (55%), Gaps = 4/245 (1%)
Query: 33 LSALLSVFPFIVFGANLAG----FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAV 88
+S +L++FPF++F LAG + + ++D+VFGAWP ++ PI E+ VL
Sbjct: 1 MSMMLALFPFVLFTVALAGAVANLVSHELRLQQLVDLVFGAWPTEVSGPILRELYAVLET 60
Query: 89 PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ GL T + A +F+SNGV A+R ++ RAY ++ R ++++RLI G V+L ++I
Sbjct: 61 SSPGLATFGGVLALFFASNGVNAIRFAMVRAYHDLDERPFWLSRLICLGLVILGGSGILI 120
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
+ +AIPL +AY + FP + L + + F+ ++ HLFLP I
Sbjct: 121 AAVFEIAIPLYVAYFSELFPQVELLNGLGKGMNRALILGMPFLAVLLCHLFLPGRIHPIR 180
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
ILPGV+ T W + + F Y+ + + YS YAGLA + ++FLY+ ILGAE
Sbjct: 181 EILPGVLVTAFLWWIAGIGFAFYVTSIAQYSATYAGLAGAIAAIIFLYVNAAILILGAEF 240
Query: 269 NASMI 273
N ++I
Sbjct: 241 NGALI 245
>gi|322375520|ref|ZP_08050033.1| putative ribonuclease BN [Streptococcus sp. C300]
gi|321279783|gb|EFX56823.1| putative ribonuclease BN [Streptococcus sp. C300]
Length = 286
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 119/269 (44%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLMIMVNILPYFQIP--VSNFLLTIKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + + +VL P+ GL + + L+A + S ++ L+ + N+AY V + R
Sbjct: 71 PDTVYDVVAKIVREVLTQPSTGLLSFAVLSALWTFSKSMDFLQKAFNKAYGVTKSRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + F+ + + L ++ ++ + L + + +F
Sbjct: 131 HQLMSLLVSFGLQILFAFALFLSMFGRMLLNLLKTYWQSDSPLFSYLQDFTGPLVYALIF 190
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L+ ++ FLP K+ +I +LPG +F ++ + +F+ Y+ ++ + +SI+
Sbjct: 191 AILVMIYYFLPKVKAPRIRYVLPGSVFVLLTLIFLLNIFSVYVNSYVNHLVDVRFFSSII 250
Query: 250 --TCLVFLYMLGVFFILGAELNASMIIYY 276
+ + ++ I+GA +NAS+
Sbjct: 251 VVVMMFWFILIAKILIIGAVINASVQSLK 279
>gi|294010161|ref|YP_003543621.1| putative ribonuclease BN [Sphingobium japonicum UT26S]
gi|292673491|dbj|BAI95009.1| putative ribonuclease BN [Sphingobium japonicum UT26S]
Length = 323
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ +L+++FPF + A +A G Q + P +A+ +
Sbjct: 50 NDGFIHAGNLAYLSLMTLFPFFIVAAAVASIFGRSQDGLAAVGAFLETVPPGVAEVVRQP 109
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I+ VL L + L + + +E +R L RAY R ++ RL + G L+
Sbjct: 110 IVDVLNARTGPLLWLGGLVGLWTVGSLIETIRDILRRAYGTRSTRPFWHYRLTAIGITLV 169
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
+ ++ + V I ++ + P + I+ ++ A M L + L ++++ L
Sbjct: 170 SVFAVMFAFSMQVIITGIDQFLHQILPFADQAIQIVSLTKL-APMAILCVALYYLYVSLT 228
Query: 202 A--AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
K PG I T + W +L + Y Y LA +M L+F +++G
Sbjct: 229 PSLYKDPRFPKWPGAIATALWWYGVTLLLPVTLSMLGGYDMTYGSLAGVMITLIFFFLVG 288
Query: 260 VFFILGAELN 269
+ ++GAELN
Sbjct: 289 LGVVIGAELN 298
>gi|158313101|ref|YP_001505609.1| ribonuclease BN [Frankia sp. EAN1pec]
gi|158108506|gb|ABW10703.1| ribonuclease BN [Frankia sp. EAN1pec]
Length = 360
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 106/275 (38%), Gaps = 13/275 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------HQFVPT 61
+ + + +A+ LLS+ P ++ G++G +
Sbjct: 63 LRLARTTVANAWRHRVLGLAAEAGFWQLLSMPPLLLALLGTIGYIGDLLGGDALDNVRLS 122
Query: 62 VIDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++D + + I ++L+ + +I + + + S + ++ AY
Sbjct: 123 ILDGADNLLTASVVDDTVRPTIDEILSRGRPDVISIGFVLSLWTGSTAMATFVNTITIAY 182
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIW 178
E+RS +RL++ G L T V++ V P L+ + P + +LL I++
Sbjct: 183 GQRELRSAVRSRLLALGLFLAQVATGVLLLPALVLGPGLLSDMLNSGRHPVVDDLLKILF 242
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ L ++ + LPG W+VG+ L Y+ +
Sbjct: 243 ---WPVVGVVSLAMLTTLYHLALPVRRSWRRALPGAALALFLWLVGSYLLRMYLELVFSN 299
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y L + + L+F Y+ + +LGAELNA++
Sbjct: 300 ELVYGSLGAPVAALLFFYITALAVLLGAELNAAID 334
>gi|330833243|ref|YP_004402068.1| ribonuclease BN [Streptococcus suis ST3]
gi|329307466|gb|AEB81882.1| ribonuclease BN [Streptococcus suis ST3]
Length = 309
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 113/262 (43%), Gaps = 5/262 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ D + ++ L+S+FP ++ ANL + V ++ VV P+ +
Sbjct: 17 FFSFYRSADSDVTSVAVAYYLLISIFPILLTLANLLPYYPFD--VDMILSVVAEFVPDKL 74
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ I VL P+ IS L + S + L+ + N+AY + E R + I LI
Sbjct: 75 YPSVSSFITSVLTKPSSSWLGISILTTLWTLSRSMTILQKAFNKAYGINEHRDFIIGHLI 134
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ V +++ + +Y+ K P L + + ++ALF L+
Sbjct: 135 GIFLGIGLQVIILLSITLLTFGQAVFSYINKLVPIEDAWLKGLLSQTQLVGLMALFAALV 194
Query: 195 FVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM--TC 251
++ FLP + K+ + PG +F ++ LF+ Y+ ++ + + +++
Sbjct: 195 MLYFFLPNVRIKKVRYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLDFRIVTAVVFLVF 254
Query: 252 LVFLYMLGVFFILGAELNASMI 273
+++ + I+GA +NA++
Sbjct: 255 MLWFIFMAQVLIIGAMINATVQ 276
>gi|148989029|ref|ZP_01820429.1| ribonuclease BN, putative [Streptococcus pneumoniae SP6-BS73]
gi|147925526|gb|EDK76603.1| ribonuclease BN, putative [Streptococcus pneumoniae SP6-BS73]
gi|332202534|gb|EGJ16603.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA41317]
Length = 286
Score = 149 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 110/269 (40%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S F+ + + LA + ++ G + + LF
Sbjct: 131 HQMLSLLVSFGLQFLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 190
Query: 191 IGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP + KI LPG F + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASMQSLK 279
>gi|58336949|ref|YP_193534.1| hypothetical protein LBA0624 [Lactobacillus acidophilus NCFM]
gi|227903506|ref|ZP_04021311.1| possible ribonuclease BN [Lactobacillus acidophilus ATCC 4796]
gi|58254266|gb|AAV42503.1| predicted membrane protein [Lactobacillus acidophilus NCFM]
gi|227868393|gb|EEJ75814.1| possible ribonuclease BN [Lactobacillus acidophilus ATCC 4796]
Length = 308
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 8/261 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + + + I+ L S+FP I+ N+ + + +P+ ++ I
Sbjct: 23 LSQGEIFDSSIIIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAKYLNIVFPDQVSSFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EMR----SWYITR 132
+ +L + G + + A + SN V A+R+ NR Y V E+R ++ TR
Sbjct: 81 MPIVNSLLKTTSTGYMSFGIVLAIWSFSNLVNAIRLGENRLYGVHQIELRLSIINFIWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+I+ + L + S V V L +++ + +++ R +L + +
Sbjct: 141 VITVVFTALMIIIFTFASIVLVFGQQVLNFLKPITNLPVEEISRVFSYRYPVVLLMMVLA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K K + PGV T I W+ + LF+ Y+ F Y + + + +
Sbjct: 201 VFYLNYVLPNIKLKKRVVWPGVFATVIGWLALSFLFSFYLHHFPITWENYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMI 273
++L + F+ G +NA++I
Sbjct: 261 LWLNIAAFLFLFGVAVNAAII 281
>gi|329890898|ref|ZP_08269241.1| ribonuclease BN-like family protein [Brevundimonas diminuta ATCC
11568]
gi|328846199|gb|EGF95763.1| ribonuclease BN-like family protein [Brevundimonas diminuta ATCC
11568]
Length = 331
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 114/268 (42%), Gaps = 10/268 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + + + +A ++ LL++FP + + G + ++
Sbjct: 10 DILWRTVMGYFGDRVGFVAGGVTFFLLLALFPTLGAFVTIYGLFADPADAWGQLSFLYEV 69
Query: 70 WPEVIAKPITDEILQVLAVPAK---GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +A+ + E+ ++ + L + ++ G++ L LN AY VE R
Sbjct: 70 LPSNVAQFLGAEMTRLAGSSTGQLTFTLIWTLLLTLWAANGGIKTLFYGLNLAYHEVERR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ I L+ G+ + A +++ S + V +P+ LA L + + R
Sbjct: 130 NIVIYNLVCMGFTVSAMAAVMLSSALVVGVPVVLAVF-----GLEDEWAYLAPLRWPLLF 184
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L ++ + P+ +++ + PG +F ++ + LF+ ++ TF + Y L
Sbjct: 185 LGYAGALALIYRYGPSRARARWRWLTPGALFAASLSLLVSFLFSWFLTTFV-RTDSYGPL 243
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
A+ M L++ + ++GA LNA +
Sbjct: 244 AAAMGFLLWTWFSVQVILMGARLNAEIE 271
>gi|42521087|ref|NP_967002.1| ribonuclease BN family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410828|gb|AAS14936.1| ribonuclease, BN family [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 271
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 121/281 (43%), Gaps = 12/281 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + F + +Y A+ + DG A ++S LLS+FPF++ +A
Sbjct: 1 MPQKFYSIVYCLYRALIDTIYNDGVEHAGYLSFLILLSIFPFLIVLMAMASTFANFLDQY 60
Query: 61 TV-IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + P+ I + I ++++ P + L T++ + A + +S+ +E LR LN+A
Sbjct: 61 NIGWVFIIDNMPQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKA 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y+ + + R++S L+ ++ + + +P+ + + +
Sbjct: 121 YKAPVSPPYILRRVLSILQFLVITLIITLTIVFSTLVPMLIDFSYQGLSY---------- 170
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTY 238
R LF + +++ LP K + + PG I W + A F Y+ +F
Sbjct: 171 TRYLLIEFVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFGQL 230
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y L ++ L+F YML + FI GA+ N + + +
Sbjct: 231 DLIYGSLGGVVVSLLFFYMLSLIFIYGAKFNFQLKYFNESR 271
>gi|306824943|ref|ZP_07458286.1| possible ribonuclease BN [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432770|gb|EFM35743.1| possible ribonuclease BN [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 286
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 118/269 (43%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLYYYQASDSELTSVAVAYYWLISIFPLLMIMVNILPYFQIP--VSNFLLTIKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + + +VL P+ GL + + L+A + S ++ L+ + N+AY V + R
Sbjct: 71 PDTVYDVVAKIVREVLTQPSTGLLSFAVLSALWTFSKSMDFLQKAFNKAYGVTKSRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S L + + F+ + + L + ++ + L + + +F
Sbjct: 131 HQLMSLLVSLGLQILFALALFLSMFGRMLLNLFKTYWQSDSPLFSYLQDFTGPLVYALIF 190
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L+ ++ FLP K+ +I +LPG +F ++ + +F+ Y + + +SI+
Sbjct: 191 AILVMIYYFLPKVKTPRIRYVLPGSVFVLLTLIFLLNIFSVYFNNYVNHLVDVRFFSSII 250
Query: 250 --TCLVFLYMLGVFFILGAELNASMIIYY 276
+ + ++ I+GA +NAS+
Sbjct: 251 VVVMMFWFILIAKILIIGAVINASVQSLK 279
>gi|262047121|ref|ZP_06020080.1| methionine aminopeptidase [Lactobacillus crispatus MV-3A-US]
gi|295692490|ref|YP_003601100.1| hypothetical protein LCRIS_00628 [Lactobacillus crispatus ST1]
gi|312977780|ref|ZP_07789527.1| putative membrane protein [Lactobacillus crispatus CTV-05]
gi|260572698|gb|EEX29259.1| methionine aminopeptidase [Lactobacillus crispatus MV-3A-US]
gi|295030596|emb|CBL50075.1| Membrane protein [Lactobacillus crispatus ST1]
gi|310895519|gb|EFQ44586.1| putative membrane protein [Lactobacillus crispatus CTV-05]
Length = 307
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 8/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + +A + I+ L S+FP I+ N+ + + + +P+ ++K I
Sbjct: 23 LSQGEIFASSIIIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAEYLNLVFPDQVSKFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ ++ TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIVFAVWSLSNMVNAIRLGENRLYGVHQVELKLSMLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I+F + L + I + V L ++ F N + I++ R +L + +
Sbjct: 141 TITFVFTGLMILVFTIATLALVFGQQVLNFLGPIFQLPLNEISKIFSYRYPVLILVMMLA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L +++ LP K K I PGV T + W+ + LF+ Y+ F Y + + + +
Sbjct: 201 LWYLNYVLPNIKLKKRVIWPGVFVTVVGWLALSFLFSFYLHHFPITWENYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
++L + V F+ G +NA+++
Sbjct: 261 LWLNIAAVLFLFGVGVNAAIVRNR 284
>gi|255003094|ref|ZP_05278058.1| hypothetical protein AmarPR_02223 [Anaplasma marginale str. Puerto
Rico]
Length = 291
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 120/265 (45%), Gaps = 12/265 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-----FLGAHQFVPTV 62
AI F DG + +++ LL+ FPF+VF + F+ +
Sbjct: 29 FLRCAGLAIADFRRHDGLVYSGYLAFIFLLATFPFLVFFTAMTSTALNVLDKHEDFLQGL 88
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV
Sbjct: 89 VTSLLSELPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRV 148
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + R++S L+ + ++ V +P+ L + + + LG + +
Sbjct: 149 SAPPPYILGRMLSILQFLVIVLVMMFSVLFIVFVPIVLDVLDQKWGYLGYI-------KY 201
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + L + + ++ +P + +I ILPG + I W + F+ Y+ F TMY
Sbjct: 202 TLSEVILCLSVALLYFMVPNTRQRIGVILPGAVVVTILWTASSFTFSWYLSNFRVLHTMY 261
Query: 243 AGLASIMTCLVFLYMLGVFFILGAE 267
L+ I+ ++F Y+L +FFI GA
Sbjct: 262 GNLSGIIASMLFFYILSIFFIYGAV 286
>gi|15672595|ref|NP_266769.1| hypothetical protein L1778 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723510|gb|AAK04711.1|AE006294_6 hypothetical protein L1778 [Lactococcus lactis subsp. lactis
Il1403]
Length = 297
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 60/282 (21%), Positives = 115/282 (40%), Gaps = 5/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + ++ + F + + ++ LL++FP + N+ FL +
Sbjct: 1 MKKVIQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHIN--TT 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + P + K I I +L GL ++S LA + S + AL++S+N+AY
Sbjct: 59 ALLSFLSEQLPSDVYKGIEPVINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R + ++R+I + L + L L V + FP +L + N
Sbjct: 119 EVFNHRDFIVSRIIGLAAGFAILLFLYFSIVLSTFGQLILEQVHRLFPFDDHLYRTLHNM 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A +A F+ L+ ++ LP K K+ +PG IF+ V Y+
Sbjct: 179 TLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRL 238
Query: 240 TMYAGLASIMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ +++ + I+GA LNA K
Sbjct: 239 DDLKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGK 280
>gi|223933150|ref|ZP_03625142.1| ribonuclease BN [Streptococcus suis 89/1591]
gi|223898211|gb|EEF64580.1| ribonuclease BN [Streptococcus suis 89/1591]
Length = 309
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 119/274 (43%), Gaps = 11/274 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ FC+ F Y + D + ++ L+S+FP ++ ANL + V +
Sbjct: 11 KTFCLTFFSFYRSA------DSDVTSVAVAYYLLISIFPILLTLANLLPYYPFD--VDMI 62
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ VV P+ + ++ I VL P+ IS L + S + L+ + N+AY +
Sbjct: 63 LSVVAEFVPDKLYPSVSSFITSVLTKPSSSWLGISILTTLWTLSRSMTILQKAFNKAYGI 122
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R + I LI + V +++ + +Y+ K P L + +
Sbjct: 123 NEHRDFIIGHLIGIFLGIGLQVIVLLSITLLTFGQAVFSYINKLVPIEDAWLKGLLSQTQ 182
Query: 183 YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ALF L+ ++ FLP + K+ + PG +F ++ LF+ Y+ ++
Sbjct: 183 LVGLMALFAALVMLYFFLPNVRIKKVRYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLD 242
Query: 242 YAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+ + +++ +++ + I+GA +NA++
Sbjct: 243 FRIVTAVVFLVFMLWFIFMAQVLIVGAMINATVQ 276
>gi|164688039|ref|ZP_02212067.1| hypothetical protein CLOBAR_01684 [Clostridium bartlettii DSM
16795]
gi|164602452|gb|EDQ95917.1| hypothetical protein CLOBAR_01684 [Clostridium bartlettii DSM
16795]
Length = 303
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 44/224 (19%), Positives = 96/224 (42%)
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
++ I+++ P + I V+ + L S A + S V++L +N
Sbjct: 63 YLNKYINILESLIPSSAFIILNGLIRSVIGNRSIKLLISSFFLAIWSISKAVKSLIRGIN 122
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
R+Y V E RS++ IS + ++ + ++I + + +V + I
Sbjct: 123 RSYGVNENRSFFKVLFISLIFSIMLLLLILISLVLLIGGEKIGIFVFDLIGLDKYFIYIW 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
R +L + L+ ++ ++P K K+ +PG + + W++ ++ Y+ FS
Sbjct: 183 NILRYSVGILFVISILVILYTYMPNTKMKVRDSVPGAVLSTFLWIIVTYGYSFYVNNFSN 242
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y +Y L ++ + +LY+ + G+ELNA ++ +
Sbjct: 243 YDVIYGSLGGVIVLITWLYLSSWTILAGSELNARLLYKKRNRTK 286
>gi|296284818|ref|ZP_06862816.1| hypothetical protein CbatJ_14416 [Citromicrobium bathyomarinum
JL354]
Length = 260
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 96/265 (36%), Gaps = 17/265 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D++ E++ +A+ +S A L++ P + L G + V ID +
Sbjct: 1 MLDLLKRTWRGASEDNAGLVAAGVSYYAFLAMVPLLAVCVLLYGLVATPDAVARDIDALG 60
Query: 68 GAWPEVIAKPITDEILQVLAVP--AKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P A I D++ V AKGL ++ A + + N ++ LN + V E
Sbjct: 61 RGLPPSAASLIGDQLQSVTEAKDNAKGLGLAVALAIALFGARNAARSIIGGLNVVFNVEE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + + I+ L A L +
Sbjct: 121 DRGFLKSNAIALVVTLGAVFALALAGTAISLAAALPGAAAPVASFA-------------L 167
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+A +G F++ F P ++LPG + WV LF Y+ F+ Y+ Y
Sbjct: 168 MFIAGMLGAGFLYRFAPNRPDPPWSAVLPGAALFALVWVGATALFGSYVANFANYNATYG 227
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
L +++ L + Y+ +LG E
Sbjct: 228 SLGAVVILLTWFYLSAFVLLLGGEF 252
>gi|227877143|ref|ZP_03995217.1| possible ribonuclease BN [Lactobacillus crispatus JV-V01]
gi|256848992|ref|ZP_05554426.1| methionine aminopeptidase Map [Lactobacillus crispatus MV-1A-US]
gi|227863197|gb|EEJ70642.1| possible ribonuclease BN [Lactobacillus crispatus JV-V01]
gi|256714531|gb|EEU29518.1| methionine aminopeptidase Map [Lactobacillus crispatus MV-1A-US]
Length = 307
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 8/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + +A + I+ L S+FP I+ N+ + + + +P+ ++K I
Sbjct: 23 LSQGEIFASSIIIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAEYLNLVFPDQVSKFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ N+ Y V ++ ++ TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIVFAVWSLSNMVNAIRLGENKLYGVHQVELKLSMLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I+F + L + I + V L ++ F N + I++ R +L + +
Sbjct: 141 TITFVFTGLMILVFTIATLALVFGQQVLNFLGPIFQLPLNEISKIFSYRYPVLILVMMLA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L +++ LP K K I PGV T + W+ + LF+ Y+ F Y + + + +
Sbjct: 201 LWYLNYVLPNIKLKKRVIWPGVFVTVVGWLALSFLFSFYLHHFPITWENYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
++L + V F+ G +NA+++
Sbjct: 261 LWLNIAAVLFLFGVGVNAAIVRNR 284
>gi|253752308|ref|YP_003025449.1| ribonuclease BN-like family protein [Streptococcus suis SC84]
gi|253754134|ref|YP_003027275.1| ribonuclease BN-like family protein [Streptococcus suis P1/7]
gi|253756068|ref|YP_003029208.1| ribonuclease BN-like family protein [Streptococcus suis BM407]
gi|251816597|emb|CAZ52235.1| ribonuclease BN-like family protein [Streptococcus suis SC84]
gi|251818532|emb|CAZ56363.1| ribonuclease BN-like family protein [Streptococcus suis BM407]
gi|251820380|emb|CAR46967.1| ribonuclease BN-like family protein [Streptococcus suis P1/7]
gi|319758704|gb|ADV70646.1| hypothetical protein SSUJS14_1586 [Streptococcus suis JS14]
Length = 307
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 113/262 (43%), Gaps = 5/262 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ D + ++ L+S+FP ++ ANL + V ++ VV P+ +
Sbjct: 17 FFSFYRSADSDVTSVAVAYYLLISIFPILLTLANLLPYYPFD--VDMILSVVAEFVPDKL 74
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ I VL P+ IS L + S + L+ + N+AY + E R + I LI
Sbjct: 75 YPSVSSFITSVLTKPSSSWLGISILTTLWTLSRSMTILQKAFNKAYGINEHRDFIIGHLI 134
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ V +++ + +Y+ K P L + + ++ALF L+
Sbjct: 135 GIFLGIGLQVIILLSITLLTFGQAVFSYINKLVPIEDAWLKGLLSQTQLVGLMALFTALV 194
Query: 195 FVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM--TC 251
++ FLP + K+ + PG +F ++ LF+ Y+ ++ + + +++
Sbjct: 195 MLYFFLPNVRIKKVRYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLDFRIVTAVVFLVF 254
Query: 252 LVFLYMLGVFFILGAELNASMI 273
+++ + I+GA +NA++
Sbjct: 255 MLWFIFMAQVLIIGAMINATVQ 276
>gi|256844588|ref|ZP_05550073.1| methionine aminopeptidase Map [Lactobacillus crispatus 125-2-CHN]
gi|293379910|ref|ZP_06626020.1| YihY family protein [Lactobacillus crispatus 214-1]
gi|256613129|gb|EEU18333.1| methionine aminopeptidase Map [Lactobacillus crispatus 125-2-CHN]
gi|290923530|gb|EFE00423.1| YihY family protein [Lactobacillus crispatus 214-1]
Length = 307
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 8/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + +A + I+ L S+FP I+ N+ + + + +P+ ++K I
Sbjct: 23 LSQGEIFASSIIIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAEYLNLVFPDQVSKFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ ++ TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIVFAVWSLSNMVNAIRLGENRLYGVHQVELKLSMLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I+F + L + I + V L ++ F N + I++ R +L + +
Sbjct: 141 TITFIFTGLMILVFTIATLALVFGQQVLNFLGPIFQLPLNEISKIFSYRYPVLILVMMLA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L +++ LP K K I PGV T + W+ + LF+ Y+ F Y + + + +
Sbjct: 201 LWYLNYVLPNIKLKKRVIWPGVFVTVVGWLALSFLFSFYLHHFPITWENYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
++L + V F+ G +NA+++
Sbjct: 261 LWLNIAAVLFLFGVGVNAAIVRNR 284
>gi|225677100|ref|ZP_03788102.1| ribonuclease, BN family [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590859|gb|EEH12084.1| ribonuclease, BN family [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 271
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 61/281 (21%), Positives = 122/281 (43%), Gaps = 12/281 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + F + +Y A+ + DG A ++S LLS+FPF++ +A
Sbjct: 1 MLQKFYSIVYCLYRALIDTIHNDGVEHAGYLSFLILLSIFPFLIVLMAVASTFANFLDQY 60
Query: 61 TV-IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + P+ I + I ++++ P + L T++ + A + +S+ +E LR LN+A
Sbjct: 61 NIGWVFIIDNMPQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKA 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y+V + + R++S L+ ++ + + +P+ + + +
Sbjct: 121 YKVPVSPPYILRRVLSILQFLVITLIITLTIVFSTLVPMLIDFSYQGLSY---------- 170
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTY 238
R LF + +++ LP K + + PG I W + A F Y+ +F
Sbjct: 171 TRYLLIEFVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQL 230
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y L ++ L+F YML + FI GA+ N + + +
Sbjct: 231 DLIYGSLGGVVVSLLFFYMLSLIFIYGAKFNFQLKYFNGSR 271
>gi|255024064|ref|ZP_05296050.1| transport protein [Listeria monocytogenes FSL J1-208]
Length = 214
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 88/193 (45%), Gaps = 2/193 (1%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
+ D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGKNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSXF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSI 210
P +S ++S+
Sbjct: 202 WVAPNRRSTLISV 214
>gi|309800620|ref|ZP_07694764.1| ribonuclease BN, putative [Streptococcus infantis SK1302]
gi|308115766|gb|EFO53298.1| ribonuclease BN, putative [Streptococcus infantis SK1302]
Length = 287
Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 118/269 (43%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + + + +
Sbjct: 13 LLKAFLHYYHVSDIELTSVAVAYYWLISIFPLLMIVVNILPYFQIP--ISDFLISLKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + +VL P+ GL + + ++A + S + L+ + N+AY + + R
Sbjct: 71 PDTIYDVVAKIAREVLTQPSAGLLSFAVISALWTFSKSMNFLQKAFNKAYGIAKNRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S L + I F+ + + L ++ ++ + +L + + + LF
Sbjct: 131 HQLMSLLVSLGLQILFAIALFLSMFGHMLLDLLKNYWKSESSLFAYLQDFTGPLIYVFLF 190
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
LI ++ FLP K +I +LPG +F ++ + +F+ Y + Y +SI+
Sbjct: 191 AILIMLYYFLPNVKIGRIRYVLPGSLFVLLTLISLLTIFSAYFNNYVNYLVDVRFFSSII 250
Query: 250 --TCLVFLYMLGVFFILGAELNASMIIYY 276
+ + ++ I+GA +NAS+
Sbjct: 251 VVVMMFWFIIIAKLLIVGAVINASVQSLK 279
>gi|94496023|ref|ZP_01302602.1| hypothetical protein SKA58_15612 [Sphingomonas sp. SKA58]
gi|94424715|gb|EAT09737.1| hypothetical protein SKA58_15612 [Sphingomonas sp. SKA58]
Length = 321
Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
DG+ A +++ +L+++FPF + A +A G Q ++ P +A + I
Sbjct: 50 DGFIHAGNLAYLSLMTLFPFFIVAAAVASVFGRTQDGLQALNAFLYTVPRGVADVVRQPI 109
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
VL + L + L + + +E +R L RAY ++++ RL + G L +
Sbjct: 110 NDVLTARSGPLLWLGGLVGLWTVGSLIETIRDILRRAYGTKSTKAFWQYRLSAIGITLFS 169
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-YATMLALFIGLIFVHLFLP 201
++ + V I ++ + P + + ++ + R+ ++ + + +FV L
Sbjct: 170 VFAVMFAFSMQVVITGIDQFLVRLVPWADDAIALVASARLVPMAIVCVALWSLFVALTPT 229
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
A K + PG + T + W +L + Y Y LA +M L+F +++G+
Sbjct: 230 AYKDRRFPKWPGAVATALWWYGTTLLLPPTLSLLGGYGRTYGSLAGVMITLIFFFLVGLG 289
Query: 262 FILGAELNASMIIY 275
++GAELNA++ +
Sbjct: 290 VVIGAELNAALAEF 303
>gi|259500503|ref|ZP_05743405.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
gi|302191192|ref|ZP_07267446.1| hypothetical protein LineA_04212 [Lactobacillus iners AB-1]
gi|309805277|ref|ZP_07699329.1| YihY family protein [Lactobacillus iners LactinV 09V1-c]
gi|309806429|ref|ZP_07700437.1| YihY family protein [Lactobacillus iners LactinV 03V1-b]
gi|325912603|ref|ZP_08174986.1| YihY family protein [Lactobacillus iners UPII 60-B]
gi|259167887|gb|EEW52382.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
gi|308165511|gb|EFO67742.1| YihY family protein [Lactobacillus iners LactinV 09V1-c]
gi|308167182|gb|EFO69353.1| YihY family protein [Lactobacillus iners LactinV 03V1-b]
gi|325478024|gb|EGC81153.1| YihY family protein [Lactobacillus iners UPII 60-B]
Length = 306
Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 106/260 (40%), Gaps = 8/260 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM------RSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQQSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F Y + + + L
Sbjct: 199 NTYINYTIPNISMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASM 272
++L + + F++G LNA++
Sbjct: 259 MWLNLAAILFLIGVCLNATI 278
>gi|284031261|ref|YP_003381192.1| ribonuclease BN [Kribbella flavida DSM 17836]
gi|283810554|gb|ADB32393.1| ribonuclease BN [Kribbella flavida DSM 17836]
Length = 420
Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats.
Identities = 62/285 (21%), Positives = 116/285 (40%), Gaps = 19/285 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR + +I + + +A+ + A+LS+ P I A GF+ + F
Sbjct: 1 MRRIPATTWKLITQTVGTCLRYRVTGLAAEGAFFAILSLPPLIFGLAGSIGFIASRYFEV 60
Query: 61 TVIDVVFGAWPEVIAK---------PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA 111
I+ + ++ A+ I + QVL + +I + A + S +
Sbjct: 61 ETIEDIKVQIADLAARALTDDSVKTVIVPTLNQVLNGGRPDVISIGFVLALWSGSRALNV 120
Query: 112 LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
++ Y + R TR +SF A V VI+ + +A P A+ AL
Sbjct: 121 FVDTITIMYGMGGKRGIVRTRALSFSLYCAALVIGVIVLPLVLAGPDAVN-------ALL 173
Query: 172 NLLLIIWNGRIYATMLALFIGLI--FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
L N + + L G + HL +P ++ +S LPG W++G+ +
Sbjct: 174 PARLDFLNQLYWPVVTILSAGFLNTLYHLSVP-VRTPWVSDLPGSFLALSIWILGSFVLR 232
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ + +++Y LA+ + L++LYM + ++GA LNA +
Sbjct: 233 WILQSTVGGTSIYGPLAAPIAVLMWLYMSAIAVLIGAALNAVVDR 277
>gi|116628245|ref|YP_820864.1| ribonuclease BN-like family protein [Streptococcus thermophilus
LMD-9]
gi|116101522|gb|ABJ66668.1| Ribonuclease BN-like family enzyme [Streptococcus thermophilus
LMD-9]
Length = 314
Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 114/275 (41%), Gaps = 5/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + H+ + + ++ +L+VFP IV AN+ +L ++
Sbjct: 13 KLQWRPFQVYLSHYRSAEIDISSVAVAYYLILTVFPLIVIAANVFPYLNID--TTDLLKF 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ P + + + + P+ L +++L + + +L+ ++++ Y E
Sbjct: 71 MNEHLPKHFYAPAANVVQDIFSTPSGRLLGVASLTGFWTMIKSLSSLQKAIDKVYGASEH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +I+ +I L+ L + I L + + +P NL +I N +
Sbjct: 131 RDVFISHIIGGLLSLVILFLLTFALMLSTIIQSVLRIINQTYPIGSNLTQLILNSIQPLS 190
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F+G++ ++ LP K KI I+PG IFT + + LF Y++ +
Sbjct: 191 VAVVFLGMMVLYFILPNVKIRKIRYIMPGTIFTTLVIGYLSNLFGTYVIHTLSRLVDIKL 250
Query: 245 LASIM--TCLVFLYMLGVFFILGAELNASMIIYYW 277
SIM +++ L I GA NA+
Sbjct: 251 FGSIMIFIFMLWFIFLARILIFGAIFNATYQELKQ 285
>gi|322387480|ref|ZP_08061090.1| ribonuclease BN [Streptococcus infantis ATCC 700779]
gi|321142009|gb|EFX37504.1| ribonuclease BN [Streptococcus infantis ATCC 700779]
Length = 287
Score = 148 bits (375), Expect = 7e-34, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 118/269 (43%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + + + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLMIVVNILPYFQIP--ISNFLLTIKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + + + +VL P+ GL + + L+A + S ++ L+ + N+AY V + R
Sbjct: 71 PDTIYEVVAKIVREVLTQPSTGLLSFAILSALWTFSKSMDFLQKAFNKAYGVAKNRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + + F+ + + L ++ ++ + L + + LF
Sbjct: 131 HQLMSLLVSFGLQILFALALFLSMFGHMLLDLLKNYWKSESALFSYLQDFTGPLIYAFLF 190
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
+I ++ FLP K SKI ++PG +F ++ + +F Y + Y +SI
Sbjct: 191 ATVIMLYYFLPNVKVSKIRYVIPGSLFVLVTTIALLNIFAAYFNNYVNYLVDVRFFSSIV 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ I+GA LNAS+
Sbjct: 251 VVVMMFWFIIIAKILIIGAVLNASVQSLK 279
>gi|150025898|ref|YP_001296724.1| hypothetical protein FP1855 [Flavobacterium psychrophilum JIP02/86]
gi|149772439|emb|CAL43921.1| Protein of unknown function YfkH [Flavobacterium psychrophilum
JIP02/86]
Length = 315
Score = 148 bits (375), Expect = 8e-34, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 125/279 (44%), Gaps = 5/279 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++++I + V+ A+ ++ S +++FPF++F NL ++ F + V
Sbjct: 35 LYELIDFYLSGIVQGALSYRAAAVAWSFFMALFPFMLFILNLIPYIPITGFQEDFLGFVR 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + I +L GL + + + + +NGV A+ + +VE R+
Sbjct: 95 ANVPPTTFDAIDNIINDILHNSHSGLLSTGGILSVFLMTNGVNAVMSGFETSQHIVEKRA 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV---RKFFPALGNLLLIIWNGRIYA 184
++ ++ +L + L+I + + + + + + +I GR
Sbjct: 155 YFRQYFVALFISMLLTFILLITVSAIIIFEVFIQRTIIQDVLSSRISDKISLIEFGRYSF 214
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + + + F K I GV+FT I ++ + F ++V FS Y+ +Y
Sbjct: 215 IIIMIIMSIGILFKFGIRQTRKRAFITIGVVFTTILIILSSYFFGIWVVRFSKYNELYGS 274
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM--IIYYWRKKP 281
+ +++ + +L++ + +LG EL+AS+ + ++ K P
Sbjct: 275 IGTLLIVMFYLWLNCMVLLLGFELDASIYKLKHHPTKNP 313
>gi|312871837|ref|ZP_07731925.1| YihY family protein [Lactobacillus iners LEAF 3008A-a]
gi|329920156|ref|ZP_08276987.1| YihY family protein [Lactobacillus iners SPIN 1401G]
gi|311092779|gb|EFQ51135.1| YihY family protein [Lactobacillus iners LEAF 3008A-a]
gi|328936610|gb|EGG33054.1| YihY family protein [Lactobacillus iners SPIN 1401G]
Length = 306
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 106/260 (40%), Gaps = 8/260 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM------RSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQHSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F Y + + + L
Sbjct: 199 NTYINYTIPNISMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASM 272
++L + + F++G LNA++
Sbjct: 259 MWLNLAAILFLIGVCLNATI 278
>gi|55821532|ref|YP_139974.1| tRNA-processing ribonuclease BN [Streptococcus thermophilus LMG
18311]
gi|55737517|gb|AAV61159.1| tRNA-processing ribonuclease BN,putative [Streptococcus
thermophilus LMG 18311]
Length = 321
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 114/277 (41%), Gaps = 7/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + H+ + + ++ +L+VFP IV AN+ +L ++
Sbjct: 13 KLQWRPFQVYLSHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYLNID--TTDLLKF 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ P + + + + P+ L +++L + + +L+ ++++ Y E
Sbjct: 71 MNEHLPKHFYAPAANVVQDIFSTPSGRLLGVASLTGFWTMIKSLSSLQKAIDKVYGASEH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +I+ +I L+ L + I L + + +P NL +I N +
Sbjct: 131 RDVFISHIIGGLLSLVILFLLTFALMLSTIIQSVLRVINQTYPIGSNLTQLILNSIQPLS 190
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F+G++ ++ LP K KI I+PG IFT + + LF Y++ +
Sbjct: 191 VAVVFLGMMVLYFILPNVKIRKIRYIMPGTIFTTLVIGYLSNLFGTYVIHTLSRLIDIKL 250
Query: 245 LASIM----TCLVFLYMLGVFFILGAELNASMIIYYW 277
SIM +++ L I GA NA+
Sbjct: 251 FGSIMIFIFIFMLWFIFLARILIFGAVFNATYQELKQ 287
>gi|333023667|ref|ZP_08451731.1| putative integral membrane protein [Streptomyces sp. Tu6071]
gi|332743519|gb|EGJ73960.1| putative integral membrane protein [Streptomyces sp. Tu6071]
Length = 429
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 106/273 (38%), Gaps = 13/273 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPT 61
+ ++ D + +E +A+ + LLSV P ++ L G++ F
Sbjct: 8 WLLVKDTVNSCMEYRILGLAAEAAFFTLLSVPPLLLCLVGLLGYVDAWTGADTIAGFEQH 67
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+D + I + I + + + +I + A + S V ++ Y
Sbjct: 68 FLDASRTVLSDQGVHDIAEPIFEDVTRGRPDVISIGFVFALWSGSRAVNVFIDTITVMYG 127
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ +R TRL+SFG ++ + I + VA P V P G + I++
Sbjct: 128 LDGVRGIVATRLLSFGLFIVGLLVCSIALPLMVAGP---DTVVHLLPWSGLAVQILY--- 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + L ++ +S + +PG W V + Y+ + T+
Sbjct: 182 WPVVIILCVVFLTTLYHVSVPVRSPWIEDVPGSFVALAMWFVCSFALRIYLTSTIEGPTI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y LA+ + L+++ + ++GA +NA++
Sbjct: 242 YGSLAAPVAVLLWIGVSAFAVLVGAAMNAAIDR 274
>gi|229916047|ref|YP_002884693.1| ribonuclease BN [Exiguobacterium sp. AT1b]
gi|229467476|gb|ACQ69248.1| ribonuclease BN [Exiguobacterium sp. AT1b]
Length = 273
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 6/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + ++ F E + A+ ++ +LS FPF++F + GFL VI +
Sbjct: 1 MKQVFLTVVKRFFTERFFDQAAMLAYYFILSTFPFLLFVLGIVGFLPFTS--GDVIQALS 58
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE K + I V L + S L A + SS V++L +LN AYR V ++
Sbjct: 59 LIMPEASYKLLEGNIEAVFDNSKLKLASFSILPALWISSMAVQSLVRALNDAYRAVRNKA 118
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ L L L V V A+ +YV + I + R
Sbjct: 119 FWRGVLQDIAITLALMFVLPFSLLVPVIETALREISSYVLFIDEIVTTYAQIWFYFRWII 178
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
LF +FV+ +LP+ + G F + ++ + +F++Y F+ Y Y
Sbjct: 179 GTSLLFTVFVFVYKWLPSVSGTFKNSWAGAAFATVGILLVSNVFSYY-SQFANYEQFYGQ 237
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L + + L++ Y+ +LG LNA++I +
Sbjct: 238 LGAFIVLLIWFYLAASVILLGGLLNATLIERKEK 271
>gi|309808686|ref|ZP_07702577.1| YihY family protein [Lactobacillus iners LactinV 01V1-a]
gi|309810203|ref|ZP_07704048.1| YihY family protein [Lactobacillus iners SPIN 2503V10-D]
gi|312875636|ref|ZP_07735637.1| YihY family protein [Lactobacillus iners LEAF 2053A-b]
gi|315653664|ref|ZP_07906584.1| ribonuclease BN [Lactobacillus iners ATCC 55195]
gi|308168065|gb|EFO70192.1| YihY family protein [Lactobacillus iners LactinV 01V1-a]
gi|308169475|gb|EFO71523.1| YihY family protein [Lactobacillus iners SPIN 2503V10-D]
gi|311088890|gb|EFQ47333.1| YihY family protein [Lactobacillus iners LEAF 2053A-b]
gi|315489026|gb|EFU78668.1| ribonuclease BN [Lactobacillus iners ATCC 55195]
Length = 306
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 106/260 (40%), Gaps = 8/260 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM------RSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQQSNGFISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F Y + + + L
Sbjct: 199 NTYINYTIPNISMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASM 272
++L + + F++G LNA++
Sbjct: 259 MWLNLAAILFLIGVCLNATI 278
>gi|149010721|ref|ZP_01832092.1| ribonuclease BN, putative [Streptococcus pneumoniae SP19-BS75]
gi|147765202|gb|EDK72131.1| ribonuclease BN, putative [Streptococcus pneumoniae SP19-BS75]
Length = 286
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 109/269 (40%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 71 PPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNKAYGVEKSRGLIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+++S F+ + + LA + ++ G + + LF
Sbjct: 131 HQMLSLLVSFGLQFLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLF 190
Query: 191 IGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
L+ ++ FLP + KI LPG + + LF+ Y+ + + L S+
Sbjct: 191 AILVMLYYFLPNLSNRKISYTLPGSAVVLLVILGVLTLFSSYLNYYVHHLVDVRILGSVL 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ ILGA +NASM
Sbjct: 251 LVVMMFWFILIAKIVILGAVINASMQSLK 279
>gi|300768369|ref|ZP_07078271.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308180130|ref|YP_003924258.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ST-III]
gi|300494047|gb|EFK29213.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308045621|gb|ADN98164.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ST-III]
Length = 309
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 122/283 (43%), Gaps = 6/283 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + + + I + + + A ++ AL+S+ P I+ NL
Sbjct: 3 LKARYPKITKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKS--G 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ P + + ++ L+ + +I L + +S + A+R SLN AY
Sbjct: 61 QILAYAQEVIPSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA----LGNLLLI 176
V + ++ TR+I+F L + +V ++ F L L + + N +
Sbjct: 121 GVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQ 180
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + T + +F+ + ++ F+P AK K+ I G + T I W+V + F YI F+
Sbjct: 181 LLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA 240
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T Y + S++ + +L G+ + G +NAS+ ++ K
Sbjct: 241 KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEHK 283
>gi|190571310|ref|YP_001975668.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018707|ref|ZP_03334515.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357582|emb|CAQ55023.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995658|gb|EEB56298.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 271
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 12/271 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + F + +Y A+ + DG A ++S LLS+FPF++ +A
Sbjct: 1 MLQKFYSIVYCLYRALIDTIYNDGVEHAGYLSFLILLSIFPFLIVLIAMASTFANFLDQY 60
Query: 61 TV-IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V + P+ I + I ++++ P + L T++ + A + +S+ +E R LN+A
Sbjct: 61 NVGWAFIIDNMPQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGFRTILNKA 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y+V + R++S L+ ++ + F +P+ + + +
Sbjct: 121 YKVPVSSPYIWRRVLSILQFLVITLVTTLTIVFFTLVPMLIDFSYQGLSY---------- 170
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTY 238
R LF + +++ LP K + + PG I W + A F Y+ +F
Sbjct: 171 TRYLLIEFVLFTIVSWLYFTLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQL 230
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ +Y L ++ L+F Y+L + FI GA+ N
Sbjct: 231 NLIYGSLGGVVVSLLFFYVLSLIFIYGAKFN 261
>gi|300362065|ref|ZP_07058242.1| ribonuclease BN [Lactobacillus gasseri JV-V03]
gi|300354684|gb|EFJ70555.1| ribonuclease BN [Lactobacillus gasseri JV-V03]
Length = 307
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 8/276 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I +H + + + I+ LLS+FP I+ N+ + +
Sbjct: 14 NFIQLLSKHISQGEINQNSIIIAYYVLLSIFPIIIIIGNVLPLFSID--TKPIARYLELI 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRS 127
+P ++ I + +L + G ++ + A + S V ++R+ N+ Y V E
Sbjct: 72 FPSQVSSLIMPIVNALLKKHSSGFISLGIVVAIWSLSCLVNSIRLGANKIYGVDKQEKGK 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI----IWNGRIY 183
+ L++ + SV LV+ + + I + +F + NL L + N R
Sbjct: 132 SWWNYLLARTFTFALSVILVVGFSIIIFIFTFGRQIMEFLAPIFNLSLWWVYKLENYRWP 191
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L I ++++ +P + + + PGV FT ISW + F Y+ F T Y
Sbjct: 192 IIILMTVIVNLYINYVIPNIRVQKRVVWPGVWFTVISWSALSYFFGLYLRQFGTRWQNYG 251
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S + +++L + +LG +NA+ RK
Sbjct: 252 IVGSFIIFMLWLNVGSFLLLLGICINAAGDELKGRK 287
>gi|116511406|ref|YP_808622.1| ribonuclease BN-like family protein [Lactococcus lactis subsp.
cremoris SK11]
gi|116107060|gb|ABJ72200.1| Ribonuclease BN-like family enzyme [Lactococcus lactis subsp.
cremoris SK11]
Length = 301
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 113/282 (40%), Gaps = 5/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + ++ + F + + ++ LL++FP + N+ FL
Sbjct: 5 MKKGLQKIGELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIIGNILPFLHID--TS 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + P + + I I +L GL ++S LA + S + AL++S+N+AY
Sbjct: 63 GLLSFLSEQLPSDVYRGIEPVINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R + ++R+I + L + L L V + F +L + N
Sbjct: 123 EVFNHRDFIVSRVIGLAAGFAILLFLYFSIVLSTFGQLILEQVHRIFAFDDHLYRTLHNM 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A +A F+ L+ ++ LP K K+ +PG IF+ V Y+
Sbjct: 183 TLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRL 242
Query: 240 TMYAGLASIMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ +++ + I+GA LNA K
Sbjct: 243 DDLKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGK 284
>gi|148259057|ref|YP_001233184.1| putative ribonuclease BN [Acidiphilium cryptum JF-5]
gi|326402184|ref|YP_004282265.1| putative ribonuclease [Acidiphilium multivorum AIU301]
gi|146400738|gb|ABQ29265.1| putative ribonuclease BN [Acidiphilium cryptum JF-5]
gi|325049045|dbj|BAJ79383.1| putative ribonuclease [Acidiphilium multivorum AIU301]
Length = 283
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 59/284 (20%), Positives = 120/284 (42%), Gaps = 8/284 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + F + A + + +A+ + A L++FP + +L G V
Sbjct: 4 RTRLDLWFRALRAAAIEVMSGEMSLVAAGCAFYATLALFPAMTALISLYGLAFNPVTVEP 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNR 118
+ + P I I Q+++ L IS Y S++G+++L +LN
Sbjct: 64 QLLYLKHLMPPAAFALIGGRIQQLVSGGKTTLGIGLVISLGFTLYSSASGIKSLIYALNV 123
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
++ E R ++ + ++ L+A + VI V V +PL LA++ ++
Sbjct: 124 IHKRQETRGFFEFQAVTLAMTLIAMLGAVIAIAVLVGMPLVLAFLGLAKAP----AVLTV 179
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ + L ++ F PA + ++PG + + W+V + F Y+ F+
Sbjct: 180 LPGFALLIGSMGLALGLLYRFGPAFGRDAGHPVVPGALVAILVWLVVSYGFAVYVGQFAA 239
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
YS Y LA+I+ +++ Y+ + GA NA++ +P
Sbjct: 240 YSRTYGPLATIIGLMMWFYLSAYAVLFGALFNATLDRASVAFRP 283
>gi|114328813|ref|YP_745970.1| ribonuclease BN [Granulibacter bethesdensis CGDNIH1]
gi|114316987|gb|ABI63047.1| ribonuclease BN [Granulibacter bethesdensis CGDNIH1]
Length = 287
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 57/283 (20%), Positives = 119/283 (42%), Gaps = 8/283 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ ++ + + +A+ + A L++FP + + G L +
Sbjct: 6 RAFWSDWRTVMIGTGRKMIGDQMSLIAAGCAFYATLALFPTMTMLIFVYGLLLDPATIRP 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNR 118
+D + P + + + I ++A P K L S A + SS G++A+ +LN
Sbjct: 66 QLDHLPELLPPGAFELVENRIDWLVAQPRKTLGFGALFSGGFAFWSSSTGIKAMMSALNI 125
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY E RS+ ++I L A + + VA+P L++ G +
Sbjct: 126 AYEEKESRSFLRVQVIGLLMTLAALLAGAVSLAFLVALPAILSFTG----MSGYREYLTR 181
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G I +L L + ++ + P + + G + + +V+ ++L + YI +
Sbjct: 182 TGGIGLLLLFLLFSISLLYRYGPCRRKVTWRWMTAGSVVASLLFVIVSLLVSLYIARLAL 241
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y Y L++++ +++ + + +LGAELN + + KK
Sbjct: 242 YDATYGPLSAVVGTMIWFWSVIYAILLGAELNRVLELRADAKK 284
>gi|312278870|gb|ADQ63527.1| Ribonuclease BN-like family enzyme [Streptococcus thermophilus
ND03]
Length = 315
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 114/277 (41%), Gaps = 7/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + H+ + + ++ +L+VFP IV AN+ +L ++
Sbjct: 7 KLQWRPFQVYLSHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYLNID--TTDLLKF 64
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ P + + + + P+ L +++L + + +L+ ++++ Y E
Sbjct: 65 MNEHLPKHFYAPAANVVQDIFSTPSGRLLGVASLTGFWTMIKSLSSLQKAIDKVYGASEH 124
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +I+ +I L+ L + I L + + +P NL +I N +
Sbjct: 125 RDVFISHIIGGLLSLVILFLLTFALMLSTIIQSVLRVINQTYPIGSNLTQLILNSIQPLS 184
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F+G++ ++ LP K KI I+PG IFT + + LF Y++ +
Sbjct: 185 VAVVFLGMMVLYFILPNVKIRKIRYIMPGTIFTTLVIGYLSNLFGTYVIHTLSRLIDIKL 244
Query: 245 LASIM----TCLVFLYMLGVFFILGAELNASMIIYYW 277
SIM +++ L I GA NA+
Sbjct: 245 FGSIMIFIFIFMLWFIFLARILIFGAVFNATYQELKQ 281
>gi|322391709|ref|ZP_08065176.1| ribonuclease BN [Streptococcus peroris ATCC 700780]
gi|321145419|gb|EFX40813.1| ribonuclease BN [Streptococcus peroris ATCC 700780]
Length = 287
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 117/269 (43%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + + + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLMIVVNILPYFQIP--ISNFLLTIKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + + + +VL P+ GL + + L+A + S + L+ + N+AY + + R
Sbjct: 71 PDTIYEVVAKIVREVLTQPSTGLLSFAILSALWTFSKSMNFLQKAFNKAYGIAKNRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + + F+ + + L ++ ++ + L + + LF
Sbjct: 131 HQLMSLLVSFGLQILFALALFLSMFGHMLLDLLKNYWKSESALFSYLQDFTGPLIYAFLF 190
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI- 248
+I ++ FLP K SKI ++PG +F ++ + +F Y + Y +SI
Sbjct: 191 AIVIMLYYFLPNVKVSKIRYVIPGSLFVLVTTIALLNIFAAYFNNYVNYLVDVRFFSSIV 250
Query: 249 -MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + ++ I+GA +NAS+
Sbjct: 251 VVVMMFWFIIIAKILIIGAVINASVQSLK 279
>gi|111225044|ref|YP_715838.1| hypothetical protein FRAAL5685 [Frankia alni ACN14a]
gi|111152576|emb|CAJ64318.1| Conserved hypothetical protein; putative membrane protein [Frankia
alni ACN14a]
Length = 453
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 108/281 (38%), Gaps = 9/281 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------HQFVPT 61
+ + + +A+ LLS+ P ++ G++ +
Sbjct: 85 LRLARTTLANAWRHRVLGLAAEAGFWQLLSLPPLLLSLLGALGYVADAIGGDALSSIRDS 144
Query: 62 VIDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ E + + + ++L+ + +I + + + S + ++ AY
Sbjct: 145 ILRGAGDLLTESVVDDAVRPTVDEILSRGRPDVISIGFVLSLWTGSTAMATFVNTITIAY 204
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ RS +RL++ G L + VI+ + P ++ + L+
Sbjct: 205 GQRDRRSAVRSRLVALGLFLAQVTSGVIILPALILGPGLISRILDADQHPSVDHLLTLLF 264
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++AL + HL LP + LPG + W+VG+ + Y+ ++
Sbjct: 265 WPVVGLVALTMLTSLYHLSLP-VRRPWWRALPGATLALVCWLVGSDVLRLYLEIVFSHEL 323
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+Y L + + L+F Y+ + +LGAELNA++ +++
Sbjct: 324 VYGSLGAPVAALLFFYITALAVLLGAELNAALDEQSSQRRK 364
>gi|308176403|ref|YP_003915809.1| ribonuclease BN-like protein [Arthrobacter arilaitensis Re117]
gi|307743866|emb|CBT74838.1| ribonuclease BN-like protein [Arthrobacter arilaitensis Re117]
Length = 392
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/290 (17%), Positives = 112/290 (38%), Gaps = 14/290 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFP-FIVFGANLAGFLGAHQFVP 60
++ F + A+ F DG +A+ +S +L++FP + + LA +
Sbjct: 9 KDRFKESLNCYPRALREFFRNDGLDVAASLSYFMVLAMFPGLLALISLLALAGASESGTK 68
Query: 61 TVIDVVFGAW----------PEVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNG 108
+++++ + + + + + + +TI +L A + +S
Sbjct: 69 WIMELLEQSLGASGQSSGGDSQQLLDTAEQLLEGLASQAGGTFWTILAGSLGALWSTSGY 128
Query: 109 VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
V A +LNR Y E R + R F +L + V+ + +A + F
Sbjct: 129 VTAFSRALNRLYGAPEGRPQWKRRPQMFLITVLIMLVAVVTLVLVLASGSVARGIGNIFG 188
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVL 227
+L++ + ++ L + L ++ F P K K PG + + +
Sbjct: 189 LGDGFVLMLNIAKPPILLIMLLLVLALLYYFTPNVKPRKFRWFSPGTLTALVILGLSVFG 248
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F Y+ F++YS Y + ++ ++ ++ + +LGA ++ I
Sbjct: 249 FGIYVSQFASYSATYGTIGGVIILVLACWISNIALLLGASVDIEFIRLRQ 298
>gi|28377948|ref|NP_784840.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28270782|emb|CAD63687.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 306
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 121/282 (42%), Gaps = 6/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + + + I + + + A ++ AL+S+ P I+ NL
Sbjct: 3 LKARYPKIAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKS--G 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ P + + ++ L+ + +I L + +S + A+R SLN AY
Sbjct: 61 QILAYAQEVIPSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA----LGNLLLI 176
V + ++ TR+I+F L + +V ++ F L L + + N +
Sbjct: 121 GVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQ 180
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + T + +F+ + ++ F+P AK K+ I G + T I W+V + F YI F+
Sbjct: 181 LLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA 240
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
T Y + S++ + +L G+ + G +NAS+ ++
Sbjct: 241 KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEH 282
>gi|154484798|ref|ZP_02027246.1| hypothetical protein EUBVEN_02516 [Eubacterium ventriosum ATCC
27560]
gi|149734646|gb|EDM50563.1| hypothetical protein EUBVEN_02516 [Eubacterium ventriosum ATCC
27560]
Length = 282
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 119/269 (44%), Gaps = 2/269 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ YD I+ ++ + S +LS+FPFI+ NL G +Q
Sbjct: 1 MKHKLFNFIKKAYDFIDTIGQDKVGIYTAQASFFIILSIFPFILLFFNLIGHASINQ--N 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T+I ++ P+ + + ++ + +I+A+AA + +S GV ++ L
Sbjct: 59 TIIYLIHSYAPDSLKPLFIQVVSEIYEHVSSTAVSITAIAAIWSASKGVLSVMFGLYEIA 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ + R+++I+R +S Y ++ +V L + V P L + ++
Sbjct: 119 KIHQKRNYFISRFVSMLYTIIFTVALASTMVLLVFGNKLFNLAISLAPWLRQISIVTLML 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R L L + ++ + + PG F+ + WVV + +F+ Y+ +FS S
Sbjct: 179 RYLLVFLLLVLFFSLIYRLANFKLATFGKVFPGAFFSALGWVVFSYIFSIYVDSFSGMSY 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELN 269
MY +++ ++++Y L +GAE+N
Sbjct: 239 MYGSFTAVIVFMLWIYFLIYIMFIGAEIN 267
>gi|125623441|ref|YP_001031924.1| putative tRNA-processing ribonuclease BN [Lactococcus lactis subsp.
cremoris MG1363]
gi|124492249|emb|CAL97179.1| putative tRNA-processing ribonuclease BN [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070189|gb|ADJ59589.1| putative tRNA-processing ribonuclease BN [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 301
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 59/282 (20%), Positives = 114/282 (40%), Gaps = 5/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + ++ + F + + ++ LL++FP + N+ FL +
Sbjct: 5 MKKVLQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHIN--TT 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + P + K I I +L GL ++S LA + S + AL++S+N+AY
Sbjct: 63 ALLSFLSDQLPSDVYKGIEPVINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R + ++R+I + L + L L V + F +L + N
Sbjct: 123 EVFNHRDFIVSRVIGLAAGFAILLFLYFSIVLSTFEQLILEQVHRIFAFDDHLYRTLHNM 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A +A F+ L+ ++ LP K K+ +PG IF+ V Y+
Sbjct: 183 TLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRL 242
Query: 240 TMYAGLASIMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ +++ + I+GA LNA K
Sbjct: 243 DDLKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGK 284
>gi|320546458|ref|ZP_08040773.1| YihY family protein [Streptococcus equinus ATCC 9812]
gi|320448843|gb|EFW89571.1| YihY family protein [Streptococcus equinus ATCC 9812]
Length = 305
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 60/274 (21%), Positives = 117/274 (42%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + ++H+ + A ++ LL+ FP IV AN+ +L V ++ +
Sbjct: 16 WQPLQVYLKHYRSAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--VNILLAFMKK 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + ++ + + + P+ + ++ L A + S + +L+ ++N+AY V + R
Sbjct: 74 NLPTNLYPSVSAITIDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVAQHRDV 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I RL+ LL L + + + L + + + +I + T++
Sbjct: 134 VIGRLVGVIGSLLILFLLTFVLLFSTFLKVVLQIINSNYDLSDTMATVILHLSQPVTVIT 193
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ IGL+ ++ LP K K + ILPG IFT + V LF+ YI+ S
Sbjct: 194 IVIGLMLLYFILPNVKIKRLRYILPGTIFTSVVIVFLNSLFSSYILRTFERMVDIKTFGS 253
Query: 248 IMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++ L ILGA NA+ K
Sbjct: 254 VVIFVLMLWFIFLAHILILGAIFNATYQEVRQGK 287
>gi|300087710|ref|YP_003758232.1| ribonuclease BN [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527443|gb|ADJ25911.1| ribonuclease BN [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 295
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 117/269 (43%), Gaps = 9/269 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFG 68
+I IE +D +A+ ++ A+LS+FP ++ ++AG FL + + D +
Sbjct: 24 RVIVGTIEALGRDDASHLAAGVAYFAVLSLFPLLLGFISIAGLFLPSEAVQQAIFDFMET 83
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + ++ I + I ++A + IS LA + SSN A+ ++LNR+ V E +
Sbjct: 84 NLP-IASEIIVENIDSIIA-SRGVIGIISLLALFWTSSNMFTAIAVALNRSCGVCERHPF 141
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
YI + L A + + I L + N++L + +
Sbjct: 142 YIRKPRDMALSLAAGFLFLFSGVLPTVISLIPEAHLPLVGSTTNVILFLIGAGLS----- 196
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F+ + ++ FLP + I PG + +++ F ++ F+ + +Y + S
Sbjct: 197 -FLVFLVLYSFLPTHRRPWQFIWPGALLGTVAFEGLRYFFIMFLSNFANFKLVYGTIGSA 255
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ ++++Y+ ++GAE N + +
Sbjct: 256 VALMIWIYLSAFILLIGAEFNGQLKRLHE 284
>gi|302558422|ref|ZP_07310764.1| YihY family protein [Streptomyces griseoflavus Tu4000]
gi|302476040|gb|EFL39133.1| YihY family protein [Streptomyces griseoflavus Tu4000]
Length = 294
Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 98/267 (36%), Gaps = 3/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ +D A+ ++ A+L++FP ++ +L G L V +I +
Sbjct: 27 RALRRTPVSLWTDDVTDWAAALTYYAMLAIFPALLVTLSLVG-LRDPDDVQNLIREIGAL 85
Query: 70 WPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + + + + L + ++A + +S+ + R +L YR+ + R
Sbjct: 86 VPPDSRDIIEETLRSMARRRSAARLLLVLGTVSALWSASSYLAVFRRALYSMYRIKDQRP 145
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ T + L I + + A + + R +L
Sbjct: 146 VWRTAPRIVATAVALLTLLAISALALTVTEGLARAAGRLAGAGDAAVAVGLAFRWPVLLL 205
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ ++ + P + + + PG + W+ +V Y+ Y +Y LA
Sbjct: 206 VATVLVMLLFRAGPESTRGVRRMAPGGLLAVFLWLGASVGLYLYMAQVGAYDRLYGSLAG 265
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L+ + + GA+ NA +
Sbjct: 266 LIVFLMWLWFSNLALLAGAQFNAELAR 292
>gi|315037851|ref|YP_004031419.1| hypothetical protein LA2_03230 [Lactobacillus amylovorus GRL 1112]
gi|325956325|ref|YP_004291737.1| hypothetical protein LAC30SC_03130 [Lactobacillus acidophilus 30SC]
gi|312275984|gb|ADQ58624.1| hypothetical protein LA2_03230 [Lactobacillus amylovorus GRL 1112]
gi|325332890|gb|ADZ06798.1| hypothetical protein LAC30SC_03130 [Lactobacillus acidophilus 30SC]
gi|327183144|gb|AEA31591.1| hypothetical protein LAB52_03085 [Lactobacillus amylovorus GRL
1118]
Length = 305
Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 101/221 (45%), Gaps = 6/221 (2%)
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + + +P+ I+K I I +L + G + + A + S+ V A+R+ NR
Sbjct: 60 TAPIANYLDFVFPDQISKYIMPIINSLLKTTSTGYMSFGIVLAVWSFSSLVNAIRLGENR 119
Query: 119 AYRVVEMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
Y V ++ ++ TR+I+ + L + + V L ++ F
Sbjct: 120 LYGVRQIELKLSIVNFLWTRMITIAFTTLMIILFTGATLALVFGQQLLHFLSPIFQLPVE 179
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ I++ R +L + + + +++ LP K K I PGVI T I W+ + LF+ Y+
Sbjct: 180 EIDKIFSYRYPVVLLMMILAVYYLNYVLPNIKLKKRVIWPGVIVTVIGWLALSFLFSFYL 239
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
F Y + + + +++L + + F+LG +NA+++
Sbjct: 240 HHFPITWENYGIIGTFIIFMLWLNIAAILFLLGVGVNATIV 280
>gi|269958836|ref|YP_003328624.1| putative ribonuclease [Anaplasma centrale str. Israel]
gi|269848666|gb|ACZ49310.1| putative ribonuclease [Anaplasma centrale str. Israel]
Length = 286
Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 123/266 (46%), Gaps = 12/266 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-----FLGAHQFVPTV 62
F AI F DG + ++S LLS FPF+VF + F+ +
Sbjct: 20 FFKCAGLAIADFRRHDGLVYSGYLSFIFLLSTFPFLVFFTAMTSTALNVLDKHEDFLQGL 79
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV
Sbjct: 80 VTSLLSELPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRV 139
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + R++S L + ++ V +P+ L + + LG + +
Sbjct: 140 SAPPPYILGRMLSILQFLAIVLVMMCSVLFTVLVPIILDILDPKWGYLGYI-------KY 192
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + L + + F++ +P + ++ +LPG + + W + + F+ Y+ F TMY
Sbjct: 193 IVSEVILCLSVAFMYYMVPNTRQRMGVVLPGAVVVTVLWSLSSFTFSWYLSNFRVLHTMY 252
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
L+ I+ ++F Y++ +FFI GAEL
Sbjct: 253 GNLSGIVASMLFFYIISIFFIYGAEL 278
>gi|307294846|ref|ZP_07574688.1| ribonuclease BN [Sphingobium chlorophenolicum L-1]
gi|306879320|gb|EFN10538.1| ribonuclease BN [Sphingobium chlorophenolicum L-1]
Length = 322
Score = 146 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 3/249 (1%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
DG+ A +++ +L+++FPF + A +A G Q + P +A + I
Sbjct: 51 DGFIHAGNLAYLSLMTLFPFFIVAAAVASIFGHSQDGLAAVRAFLETVPPGVADVVRQPI 110
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ VL L + L + + +E +R L RAY R ++ RL + G L++
Sbjct: 111 IDVLNARTGPLLWLGGLVGLWTVGSLIETIRDILRRAYGTKSTRPFWHYRLTAIGITLVS 170
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
++ + V I ++ + P + I+ ++ A M L + L ++++ L
Sbjct: 171 VFAVMFAFSMQVIITGIDQFLHQILPFADQAIQIVALTKL-APMAILCVALYYLYVSLTP 229
Query: 203 --AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
K PG I T + W +L + Y Y LA +M L+F +++G+
Sbjct: 230 SLYKDPRFPKWPGAIATALWWYGVTLLLPVTLSLLGGYDLTYGSLAGVMITLIFFFLVGL 289
Query: 261 FFILGAELN 269
++GAELN
Sbjct: 290 GVVIGAELN 298
>gi|116629359|ref|YP_814531.1| ribonuclease BN-like family protein [Lactobacillus gasseri ATCC
33323]
gi|238853046|ref|ZP_04643439.1| YihY family protein [Lactobacillus gasseri 202-4]
gi|311110986|ref|ZP_07712383.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116094941|gb|ABJ60093.1| Ribonuclease BN-like family enzyme [Lactobacillus gasseri ATCC
33323]
gi|238834344|gb|EEQ26588.1| YihY family protein [Lactobacillus gasseri 202-4]
gi|311066140|gb|EFQ46480.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 307
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 52/285 (18%), Positives = 113/285 (39%), Gaps = 8/285 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + + + ++ + + + I+ LLS+FP I+ N+
Sbjct: 5 LNQTKNRITEFFQLLSKYISQGEINQTSIIIAYYVLLSIFPIIIIIGNVLPLFSID--TK 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +P ++ I I +L + G ++ + A + S V ++R++ N+ Y
Sbjct: 63 PIARYLELIFPSQVSSLIMPIINALLKKHSSGFISLGIVIAIWSLSCLVNSVRLAANKIY 122
Query: 121 RVVEM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
V + ++ + R +F ++ I+ FVF + ++ F +
Sbjct: 123 GVDKKEKGKSWWNYLLARTFTFALSVILVAGFSIIIFVFTFGRQIMEFLAPIFNLSLWWV 182
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ N R +L I ++++ +P + + PGV FT SW + F Y+
Sbjct: 183 YKLENYRWPIIILMTVIINLYINYVIPNISVQKRVVWPGVCFTVASWGALSYFFGLYLRQ 242
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
F T Y + S + +++L + +LG +NA+ RK
Sbjct: 243 FGTRWQNYGIVGSFIIFMLWLNIGSFLLLLGICINATGDELKDRK 287
>gi|111656939|ref|ZP_01407757.1| hypothetical protein SpneT_02001818 [Streptococcus pneumoniae
TIGR4]
Length = 269
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 5/264 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ ++ D + ++ L+S+FP ++ N+ + V + + P +
Sbjct: 1 MHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVLPPSLY 58
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + +VL P+ GL + S L+A + S + L+ + N+AY V + R +++S
Sbjct: 59 EGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLS 118
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ F+ + + LA + ++ G + + LF L+
Sbjct: 119 LLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLFAILVM 178
Query: 196 VHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI--MTCL 252
++ FLP + KI LPG F + + LF+ Y+ + + L S+ + +
Sbjct: 179 LYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMM 238
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
+ ++ ILGA +NASM
Sbjct: 239 FWFILIAKIVILGAVINASMQSLK 262
>gi|227890331|ref|ZP_04008136.1| possible ribonuclease BN [Lactobacillus johnsonii ATCC 33200]
gi|227849145|gb|EEJ59231.1| possible ribonuclease BN [Lactobacillus johnsonii ATCC 33200]
Length = 302
Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 112/269 (41%), Gaps = 8/269 (2%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
++ + + + I+ LLS+FP I+ N+ L + + +P I+
Sbjct: 21 KYISQGEINQTSIIIAYYVLLSIFPIIIIIGNVLPLLNID--TEPIARYLELIFPSQISS 78
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM------RSWYI 130
I I +L + G ++ + A + S V ++R++ N+ Y V + ++ +
Sbjct: 79 LIMPIINALLKKHSSGFISLGIVIAIWSLSCLVNSIRLAANKIYGVDKKEKGKSWWNYLL 138
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +F ++ V I+ FV + ++ F + + N R +L +
Sbjct: 139 ARTFTFVLSVILVVGFSIIIFVVTFGRQIMEFLAPIFNLSLWWVYKLENYRWPIIILVMV 198
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++++ +P + + PGV FT +SW + F Y+ F T Y + S +
Sbjct: 199 IINLYINYVIPNITVRKRIVWPGVWFTVVSWSALSYFFGLYLRQFGTRWQNYGIVGSFII 258
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++L + +LG LNA+ RK
Sbjct: 259 FMLWLNVGSFLLLLGICLNATGDELKGRK 287
>gi|300866202|ref|ZP_07110917.1| putative ribonuclease BN [Oscillatoria sp. PCC 6506]
gi|300335795|emb|CBN56077.1| putative ribonuclease BN [Oscillatoria sp. PCC 6506]
Length = 340
Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 121/302 (40%), Gaps = 28/302 (9%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVID 64
+ + + + + ++ +++ ++ +A+L++FP ++ + +
Sbjct: 38 HLNWTTLKEVGDRAGKQRLLGLSAEMAYNAMLALFPALLAAIAAIALFESLQSTLYQMAR 97
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV- 123
++ P + I I ++L + +F++S + + S + A +L++ +++
Sbjct: 98 LLGEIVPNEVRTLIRSLIQEILQTRNQEIFSVSFIGTLWAFSGVLSAAMAALDQIHQIPA 157
Query: 124 -EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL--------- 173
+R ++ +L+S G + + L++ V L + V + L +
Sbjct: 158 DRIRPFWKAKLVSIGLSIGTIMLLILACGVVFISDLIVQIVARQSCFLETVSNCPFQDIS 217
Query: 174 ---------------LLIIW-NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
LL +W R T+ + F++ + P+ + ILPG I
Sbjct: 218 NCQLLPLQSCPLESKLLAVWKLWRWPITLGIVSFAFAFIYRYGPSRHRRGTPILPGAILA 277
Query: 218 WISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
I W + L Y+ F Y+ Y + + + L++L + +LGA+LN ++
Sbjct: 278 AICWAGISGLLRFYVSHFGNYNWTYGTIGTFIILLLWLNFSSLVMLLGAQLNVTVGKAMK 337
Query: 278 RK 279
RK
Sbjct: 338 RK 339
>gi|259047107|ref|ZP_05737508.1| ribonuclease [Granulicatella adiacens ATCC 49175]
gi|259036157|gb|EEW37412.1| ribonuclease [Granulicatella adiacens ATCC 49175]
Length = 306
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 57/281 (20%), Positives = 120/281 (42%), Gaps = 6/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++++ ++ II + + H + ++ ++ LLS+ P I+ AN+ L V
Sbjct: 16 LKKFGNRLWSIIQENLMHV---NIGVESAALTYYILLSIIPIIMLIANIIPLLPIP--VD 70
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +P I + + + L G ++ L + +S +L+ +LN Y
Sbjct: 71 VIFKTMRTIFPADINEVLIPILRNYLGNFNGGALSVGLLILFWPASQMFSSLQRALNVLY 130
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWN 179
R++ R + + A + + +S +F+ L + +FF L ++L
Sbjct: 131 GAPVRRNFIFERFFAIVIAMAAILMIFAVSVLFIFGEQFLRLIGEFFSLNLSTIILDFSF 190
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + +F+ L F++ +P K + LPG F I +V+ + LF+ YI
Sbjct: 191 IKWGMLFITVFLLLSFMYFAIPNVKWSFLYALPGGFFATIGFVLISQLFSIYIHYAGRNL 250
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
T +++ +++LY + ILG LN + + KK
Sbjct: 251 TANGAFGTLIVFMIWLYFIANVMILGGVLNVIIYRFRHPKK 291
>gi|256820860|ref|YP_003142139.1| ribonuclease BN [Capnocytophaga ochracea DSM 7271]
gi|256582443|gb|ACU93578.1| ribonuclease BN [Capnocytophaga ochracea DSM 7271]
Length = 303
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 108/272 (39%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ + AS IS S L++FPF++F NL ++ F +
Sbjct: 32 LYDLLELYTAGIIRGALTYRASAISYSFFLAIFPFLLFILNLIPYIPIENFQGDFWAFIE 91
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P +D + GL + + + +NG+ A+ +Y R+
Sbjct: 92 DMLPPGTHDFFSDIFFDIADKKRGGLLSSVFFLSIFLMTNGIMAIFGGFEYSYHRQITRT 151
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L + ++ ++ ++ VF+ + L + + ++ +I L
Sbjct: 152 YIKQYLYALMVAIILALLVLFAVIVFIYYEVYLVPYLDKINFITDYETLLKISKIVFVAL 211
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ G + F + G +FT + + V LF YI FS Y+ +Y + +
Sbjct: 212 ITYFGTGLLFYFGTVEGRESKFFSAGSLFTVLLFGVTTYLFGIYIENFSRYNQLYGSIGA 271
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L+++++ +LG ELNAS++
Sbjct: 272 LLIFLLYIWLNANILLLGFELNASLLKLKKHD 303
>gi|42519468|ref|NP_965398.1| hypothetical protein LJ1594 [Lactobacillus johnsonii NCC 533]
gi|268319158|ref|YP_003292814.1| hypothetical protein FI9785_671 [Lactobacillus johnsonii FI9785]
gi|41583756|gb|AAS09364.1| hypothetical protein LJ_1594 [Lactobacillus johnsonii NCC 533]
gi|262397533|emb|CAX66547.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
gi|329667010|gb|AEB92958.1| ribonuclease [Lactobacillus johnsonii DPC 6026]
Length = 302
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 54/285 (18%), Positives = 116/285 (40%), Gaps = 8/285 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + + + ++ + + + I+ LLS+FP I+ N+ L
Sbjct: 5 LNQTKNRITEFFQLLSKYISQGEINQTSIIIAYYVLLSIFPIIIIIGNVLPLLNID--TE 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +P ++ I I +L + G ++ + A + S V ++R++ N+ Y
Sbjct: 63 PIARYLELIFPSQVSSLIMPIINALLKKHSSGFISLGIVIAIWSLSCLVNSIRLAANKIY 122
Query: 121 RVVEM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
V + ++ + R +F ++ V I+ FV + ++ F +
Sbjct: 123 GVDKKEKGKSWWNYLLARTFTFVLSVILVVGFSIIIFVVTFGRQIMEFLAPIFNLSLWWV 182
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ N R +L + I ++++ +P + + PGV FT +SW + F Y+
Sbjct: 183 YKLENYRWPIIILVMVIINLYINYVIPNITVQKRIVWPGVWFTVVSWSALSYFFGLYLRQ 242
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
F T Y + S + +++L + +LG LNA+ RK
Sbjct: 243 FGTRWQNYGIVGSFIIFMLWLNVGSFLLLLGICLNATGDELKGRK 287
>gi|254556183|ref|YP_003062600.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|254045110|gb|ACT61903.1| integral membrane protein [Lactobacillus plantarum JDM1]
Length = 309
Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 121/282 (42%), Gaps = 6/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + + + I + + + A ++ AL+S+ P I+ NL
Sbjct: 3 LKARYPKIAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKS--G 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ P + + ++ L+ + +I L + +S + A+R SLN AY
Sbjct: 61 QILAYAQEVIPSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA----LGNLLLI 176
V + ++ TR+I+F L + +V ++ F L L + + N +
Sbjct: 121 GVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQ 180
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + T + +F+ + ++ F+P AK K+ I G + T I W+V + F YI F+
Sbjct: 181 LLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA 240
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
T Y + S++ + +L G+ + G +NAS+ ++
Sbjct: 241 KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEH 282
>gi|58584733|ref|YP_198306.1| tRNA processing exoribonuclease BN [Wolbachia endosymbiont strain
TRS of Brugia malayi]
gi|58419049|gb|AAW71064.1| tRNA processing exoribonuclease BN [Wolbachia endosymbiont strain
TRS of Brugia malayi]
Length = 274
Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 122/271 (45%), Gaps = 13/271 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++++ I++ +Y A+ + DG A ++S LLS+FPF++ LA
Sbjct: 5 LKKFYGIIY-CLYHALIDTIYNDGMEHAGYLSFLILLSIFPFLIVLMALASTFANFLDQY 63
Query: 61 TV-IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + P+ I + I ++++ P + L T++ + A + +S+ +E LR LN+A
Sbjct: 64 NIGWTFIIDNMPQDILASLMPRIREIISGPPQSLLTLAIVGAIWTASSTIEGLRTILNKA 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y+V + + R++S L+ + + + +P+ + +
Sbjct: 124 YKVPVSPPYVLRRILSILQFLIITFIITLTIVFSTLVPMLIDFSYHGLSY---------- 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTY 238
R LFI + +++ LP + + + PG + W V A F Y+ +F
Sbjct: 174 TRYLLIEFVLFIVVSWLYFMLPNIRQNVSDVFPGSYIAVMLWTVSASAFKQYLRASFDQL 233
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+Y L ++ L+F YM+ + FI GA+ N
Sbjct: 234 DLIYGSLGGVVVSLLFFYMVSLIFIYGAKFN 264
>gi|117927634|ref|YP_872185.1| putative ribonuclease BN [Acidothermus cellulolyticus 11B]
gi|117648097|gb|ABK52199.1| putative ribonuclease BN [Acidothermus cellulolyticus 11B]
Length = 300
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 115/275 (41%), Gaps = 7/275 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFG 68
I A+ F + +A+ ++ L S FP + + G + V + G
Sbjct: 28 RIFGGAVREFSDHRCTLLAAALAYHVLFSFFPLALVAVGIVGLVSSDPAVRNEVATRIVG 87
Query: 69 AWPEVIAKPITDEILQVLAV--PAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEM 125
P A D++ +L A+G LA ++S++GV ALR LN+A+ V
Sbjct: 88 IVPLNTAG--RDQLANLLTSIAGARGAIGFVGLAGLWWSASGVMGALRGGLNQAFDVTAK 145
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYA 184
R ++ + + VL A V + + V + + + + L + ++ G +
Sbjct: 146 RRFWRAKFLDLVLVLGAVVVVGVSFGVTILVGIFQHIAHRLPGVLADAGSWLVDTGGLGI 205
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L +F + ++ ++P S+I+ + PG + + F Y+ F Y+ +Y
Sbjct: 206 ALLFIFTMCLLLYRYVPVQSSRIVDLWPGALVAAVGLEALQYGFAFYLSNFGHYNRVYGT 265
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L I+ L F+Y+ G F GAE+ Y R+
Sbjct: 266 LGGIVAFLFFVYVAGAVFFFGAEVADGYARYRLRR 300
>gi|289167558|ref|YP_003445827.1| ribonuclease BN [Streptococcus mitis B6]
gi|288907125|emb|CBJ21959.1| ribonuclease BN [Streptococcus mitis B6]
Length = 286
Score = 144 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 118/269 (43%), Gaps = 5/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + ++ + D + ++ L+S+FP ++ N+ + V ++V G
Sbjct: 13 FLKAFLHYYQKSDSELTSVAVAYYWLISIFPLLLVLINILPYFHIS--VSNFLNVTNGFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + +++VL P+ GL + + L+A + S + L+ + N+AY V + R
Sbjct: 71 PDTVYDVVAKIVMEVLTQPSTGLLSFAVLSALWTFSKSMNYLQKAFNKAYGVAKSRGLIY 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + F+ V + L +++K++ + + L + + +F
Sbjct: 131 QQLMSLLVSFGLQILFACALFLSVFGRILLDFLKKYWQSDNPIFLYLEDFTGPLVFTLIF 190
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++ LP K +I +LPG F ++ V+ +F+ + + ++SI+
Sbjct: 191 AISVMIYYLLPNVKVPRIRYVLPGSFFVLLTLVLILNIFSASVNNYINNLVDVRFVSSII 250
Query: 250 --TCLVFLYMLGVFFILGAELNASMIIYY 276
+ + +L I+GA +NAS
Sbjct: 251 FVVTMFWFILLAKILIIGAVINASFQSLK 279
>gi|315224046|ref|ZP_07865887.1| YihY family protein [Capnocytophaga ochracea F0287]
gi|314946017|gb|EFS98025.1| YihY family protein [Capnocytophaga ochracea F0287]
Length = 303
Score = 144 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 108/272 (39%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ + AS IS S L++FPF++F NL ++ F +
Sbjct: 32 LYDLLELYTAGIIRGALTYRASAISYSFFLAIFPFLLFILNLIPYIPIENFQGDFWAFIE 91
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P +D + GL + + + +NG+ A+ +Y R+
Sbjct: 92 DMLPPGTHDFFSDIFFDIADKKRGGLLSSVFFLSIFLMTNGIMAIFGGFEYSYHRQITRT 151
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L + ++ ++ ++ VF+ + L + + ++ +I L
Sbjct: 152 YIKQYLYALMVAIILALLVLFAVVVFIYYEVYLVPYLDKINFITDYETLLKISKIVFVAL 211
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ G + F + G +FT + + + LF YI FS Y+ +Y + +
Sbjct: 212 ITYFGTGLLFYFGTVEGKESKFFSAGSLFTVLLFGLTTYLFGIYIENFSRYNQLYGSIGA 271
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L+++++ +LG ELNAS++
Sbjct: 272 LLIFLLYIWLNANILLLGFELNASLLKLKKHD 303
>gi|161507147|ref|YP_001577101.1| hypothetical protein lhv_0656 [Lactobacillus helveticus DPC 4571]
gi|160348136|gb|ABX26810.1| Predicted membrane protein [Lactobacillus helveticus DPC 4571]
Length = 307
Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 108/264 (40%), Gaps = 8/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + + I+ L S+FP I+ N+ + + +P+ ++ I
Sbjct: 23 LSQGEIIDSSIVIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAKYLNLIFPDQVSSFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ ++ TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKLSMLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + L + + V L + F + + I++ R L + +
Sbjct: 141 LIMVIFTTLMIIIFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKIFSYRYPVIFLIIILA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K K I PGV T W+ + LF+ Y+ F Y + + + +
Sbjct: 201 VFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFPITWKNYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
++L + + F+ G +NA++I
Sbjct: 261 LWLNIASLLFLFGVAVNATIIRNR 284
>gi|254381013|ref|ZP_04996378.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194339923|gb|EDX20889.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 337
Score = 144 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 105/261 (40%), Gaps = 6/261 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ ++ A+ ++ A+L++ P ++ +L G GA ++D + P
Sbjct: 64 LRGTAVRLWNDNIADYAAALTYYAVLALVPALLVSVSLVGLAGAGTRERLILD-LTSYAP 122
Query: 72 EVIAKPITDEILQVLAVPAK--GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A+ + + + + + P+ L L+A + +S+ + R +L+ +R+ + R
Sbjct: 123 PQSAQVLREALDGLTSKPSSLWVLLVSGVLSALWSASSYLAVFRRALHTMHRLPDTRPPL 182
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I + LV + VA + G + + R ++ +
Sbjct: 183 RAAHILVLTAGVLLALLVAGAASLVATGPVARRLAAAAGHSGTEAMAL--LRWPVLLVIV 240
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ ++ PA + PG W+ + LFT Y F TYS +Y LA ++
Sbjct: 241 TALILILYRTGPAEARGVRRGFPGGALAAFLWLGASALFTLY-TQFGTYSRLYGSLAGVV 299
Query: 250 TCLVFLYMLGVFFILGAELNA 270
LV+L+ + + GA+ NA
Sbjct: 300 VFLVWLWFTNLALLAGAQFNA 320
>gi|305667292|ref|YP_003863579.1| Ribonuclease BN [Maribacter sp. HTCC2170]
gi|88709339|gb|EAR01572.1| Ribonuclease BN [Maribacter sp. HTCC2170]
Length = 326
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 119/283 (42%), Gaps = 13/283 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL------GAHQFVPT 61
++D+I I V+ + AS I+ S +++FP ++F L FL G F
Sbjct: 35 LYDLIEMYILGIVQGALSSRASSIAFSLFMALFPLLIFLVTLVPFLIPYASVGNENFDAQ 94
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + P ++ + Q+ GL + + + + +NGV A+ +Y
Sbjct: 95 FLLFLESFLPTATSEYFGEIYQQIKNQQRGGLLSSAFFISIFLMANGVNAIFGGFENSYH 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF------FPALGNLL 174
+ R++ + L+ SV L+ + +V + Y+ ++ + N +
Sbjct: 155 IELTRNFIRQYAYALMVGLILSVLLMFGAAAYVYFEFYIVDYLSEWAAKTRGYDLTENDI 214
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ G++ +L + ++ F A + G + T I +++ + LF Y+
Sbjct: 215 VGAQIGKVLFFVLLSYFTTAILYYFGTAEGKQAKFFSVGALMTTILFLLTSYLFGVYVEK 274
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ Y+ +Y L ++ +VF+++ +LG ELNAS+
Sbjct: 275 FARYNELYGALGGLLILMVFIWLNSNILLLGFELNASLNSLRK 317
>gi|119487571|ref|ZP_01621181.1| Ribonuclease BN [Lyngbya sp. PCC 8106]
gi|119455740|gb|EAW36876.1| Ribonuclease BN [Lyngbya sp. PCC 8106]
Length = 420
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 49/306 (16%), Positives = 121/306 (39%), Gaps = 29/306 (9%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTV 62
+ I + I E+ +++ ++ +++L +FP ++ + +
Sbjct: 104 FLYINWTTIKQVAIRTAEQRLNGLSAEMAYNSILGLFPALLAIIAAISLSNSLQNTLQEM 163
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+V P+ + I ++L ++ +F+ S L + + S + + ++LN +RV
Sbjct: 164 ATLVAVVVPQEVQVQIASVWERMLLNNSEEIFSFSFLVSIWLFSAVIGSAMVALNHIHRV 223
Query: 123 VEMR--SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL------- 173
+ R ++ +LI+ + + + L+I + + + + + L +
Sbjct: 224 PKDRLRPFWEAKLIAIALAVGSILLLIIACGLVFISDIVVEILARQSCILETVGTCPLDQ 283
Query: 174 ------------------LLIIW-NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
L W R + + ++ F P+ + ++PG
Sbjct: 284 IKDCLEQPPVQQCLLVKTLPSTWKQLRWPIALGIVATNFALIYRFGPSKRQPETPLVPGA 343
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
I ISW V + LF Y+ F Y+ Y + + + L++LY+ + ++GA++N ++
Sbjct: 344 ILAAISWAVISNLFRLYVTHFGNYNLTYGAIGAFIILLLWLYISSLVMLIGAQVNVTVGE 403
Query: 275 YYWRKK 280
+K
Sbjct: 404 AMRLRK 409
>gi|149185280|ref|ZP_01863597.1| hypothetical protein ED21_19542 [Erythrobacter sp. SD-21]
gi|148831391|gb|EDL49825.1| hypothetical protein ED21_19542 [Erythrobacter sp. SD-21]
Length = 287
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 92/250 (36%), Gaps = 17/250 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F + A +++ +A+ ++ A L++ P + G + + G
Sbjct: 25 FAALKRAYTEANKDNAGIVAAGVAYYAFLAIVPLLAAMVMGYGLFADPATAAAHAETLAG 84
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P A+ I ++ I+ A + G AL +LN AY + E
Sbjct: 85 TLPRDAAELINGQLKSAAEAATGAKGFGLLIALGVALMGARGGANALVKALNIAYDIEEE 144
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ L++ G + A++ L+++ A + + ++ T
Sbjct: 145 RGFFRKNLLALGMTVGAAIGLIVVVGAVTAAGVLEGITGQLAS-------------LFVT 191
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+G V+ P + LPG +F ++ VV LF Y+ F +Y+ Y
Sbjct: 192 FGFAALGAALVYRVAPHRDAPAFKFQLPGAVFFAVAIVVLTALFGFYVANFGSYNATYGS 251
Query: 245 LASIMTCLVF 254
L +++ L +
Sbjct: 252 LGAVVVLLTW 261
>gi|325285231|ref|YP_004261021.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
gi|324320685|gb|ADY28150.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
Length = 328
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 120/287 (41%), Gaps = 16/287 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--------GAHQFV 59
++D++ + ++ AS I+ S +++FP ++F L FL
Sbjct: 35 LYDLLELYLNGILKGTLSTRASAIAFSLFMALFPLLIFLVTLIPFLIPYVDSGNPDTNLN 94
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
I + P I D+I +++ GL + + + + + +NGV A+
Sbjct: 95 TEFIAYLEYVLPNAINDYFFDQIYDEIMSQKRGGLLSSTFVLSIFLIANGVNAIFSGFEN 154
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA----LAYVRKFFPALGNLL 174
+Y V R + L + LL S+ +++ + V++ + ++ + + G
Sbjct: 155 SYHVSLNRHFLRQYLYALMVGLLLSILIIVSAIVYMYFEIYVIENISDTTQVYFGTGLEE 214
Query: 175 LIIWNGRIYATMLALFIG---LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
IW I + F+ + ++ F A K G + T I +V+ + LF Y
Sbjct: 215 TDIWTTEIAKVVYFTFLSYLSISILYYFGTAEGKKTKFFSSGSLMTTILFVLTSYLFGVY 274
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ F+ Y+ +Y L ++ +V++++ +LG ELNA++ +
Sbjct: 275 VDKFARYNELYGALGGLLILMVYIWLNANILLLGFELNATLNSLKKK 321
>gi|225011726|ref|ZP_03702164.1| ribonuclease BN [Flavobacteria bacterium MS024-2A]
gi|225004229|gb|EEG42201.1| ribonuclease BN [Flavobacteria bacterium MS024-2A]
Length = 308
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 119/279 (42%), Gaps = 8/279 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF------LGAHQFVPT 61
++D+I + V+ A IS S +++FPF++F NL F + F T
Sbjct: 30 IYDLIEMYVIGIVKGALSYRAGSISFSFFMALFPFLLFIINLIPFVDMIPFIHIENFDQT 89
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P T + P GL + L + + S+NGV A+ S +Y
Sbjct: 90 FLNYIELFLPSETQTFFTGIFEDIRNKPRGGLLSSVFLLSIFLSANGVSAIFGSFEVSYH 149
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS++ L S G ++ + + +F + + + + + + +
Sbjct: 150 VKLSRSFFRQYLFSMGISVVLAFLSLFAVIIFFYFEFYI--LNNLESLVPSEVRLTRISQ 207
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
I L ++ + ++ F KI PG + T + + + F YI FSTY+ +
Sbjct: 208 ISFFGLFAYLTVSILYYFGTIEGRKIRFFSPGALMTTLLFFLTTYGFGIYIDNFSTYNQL 267
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y + +++ L++++M +LG ELNA++ + K
Sbjct: 268 YGSIGALLIFLLYIWMNSNILLLGFELNATLTRFKRAPK 306
>gi|88608339|ref|YP_506282.1| YihY family protein [Neorickettsia sennetsu str. Miyayama]
gi|88600508|gb|ABD45976.1| YihY family protein [Neorickettsia sennetsu str. Miyayama]
Length = 279
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 68/276 (24%), Positives = 133/276 (48%), Gaps = 11/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------ 54
M+ F ++ +Y+ + H G A ++S LLS+FPF+ F +AG+
Sbjct: 1 MKRTFAVLKISLYNMLYH----GGSEYAGYLSFLLLLSIFPFLFFFTAVAGYTANIVGAS 56
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+++ ++ V PE I + I I ++L P GL T++ L A + +S+ VE L+
Sbjct: 57 SYEITRKLLSVFIENVPENIIEGIMPYIKEILEGPTHGLLTLTILGAIWTASSIVEGLKA 116
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
++N+AY + ++ ++ + + I+ +F+ P + K L L
Sbjct: 117 AVNKAYNFG-TETLVSEYILRRFVSVIQFLLISIIILIFLLFPTVYPLLTKNVSFLHLLK 175
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
W T +F + +++F P K K ++PG I W++ ++ F+ Y+ +
Sbjct: 176 RPSWLPYSTVTTCCIFCFVSALYIFFPKEKQKFTDVVPGSIMVVSLWILTSIAFSFYLHS 235
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F+ + +Y +A I+ +++ Y+L + FI GAE+NA
Sbjct: 236 FAQMNIIYGSIAGIIVVMLYFYLLNLCFIYGAEINA 271
>gi|254411294|ref|ZP_05025071.1| YihY family protein [Microcoleus chthonoplastes PCC 7420]
gi|196181795|gb|EDX76782.1| YihY family protein [Microcoleus chthonoplastes PCC 7420]
Length = 312
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 123/275 (44%), Gaps = 4/275 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + + + + ++ +++S ++ +A+L++FP I+ +
Sbjct: 10 LHFFRYLNLATLRITVSRALKHRLLSLSSQMAYNAMLALFPAILVIFTVIELFKQFFPWT 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
D + PE + + + + +GLF++S + A + SS + A +L++
Sbjct: 70 NPADQLGEVAPEQAMELMRNFAEGINLTDNRGLFSLSFIMAIWVSSGALNAAMNALDQIN 129
Query: 121 RV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
++ + R ++ +LI+ G L + + L I SF+ + V ++ + LL ++
Sbjct: 130 QIPSEKTRPFWKAKLIAMGLTLGSVLLLFIASFILFISNWVVNLV-EYKSIVVILLTLLR 188
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFST 237
+ + I ++ F + + ILPG + + W + + +F +Y+ FS
Sbjct: 189 LLSWLIALSLVAIVFAIIYRFGISHWRQGTPILPGAVLAAVLWAIVSGVFRNYVASNFSN 248
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y +Y L +++ ++LYM + +LG +LN ++
Sbjct: 249 YHKIYGALGAVIVLQLWLYMTSLVVLLGDQLNLTV 283
>gi|297156417|gb|ADI06129.1| putative integral membrane protein [Streptomyces bingchenggensis
BCW-1]
Length = 439
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 108/274 (39%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G+ TV +
Sbjct: 3 WLLLKDTVNSCMEYRVTGLAAEAAFFTLLSLPPLLLALIGLLGYFDVWTNTDTVATIRQN 62
Query: 69 AWPEV--------IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + V+ + ++ A + S V ++ Y
Sbjct: 63 ILNASGTVLSDKGVREIARPLLDDVIKGGRPDVISLGFAIALWSGSRAVNVFVDTITIMY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL+SF L+A + + + V P A V PA G+L+ +++
Sbjct: 123 GLEGRRGIVRTRLLSFLLYLVALIIGAVALPLMVIGPEA---VVHLVPASGDLVRVLY-- 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ +S +PG + WV+G+VL Y+V T
Sbjct: 178 -WPVVILLSVAFLTTLYHVSVPVRSPWREDIPGALVALAIWVLGSVLLRIYLVHTVEGPT 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 237 IYGSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 270
>gi|254796762|ref|YP_003081598.1| YihY family protein [Neorickettsia risticii str. Illinois]
gi|254590007|gb|ACT69369.1| YihY family protein [Neorickettsia risticii str. Illinois]
Length = 279
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 72/274 (26%), Positives = 133/274 (48%), Gaps = 13/274 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------AHQFV 59
+F ++ ++ + + G A ++S LLS+FPF+ F +AG + +++
Sbjct: 2 KRIFAVLKISLYNMLYHGGSEYAGYLSFLLLLSIFPFLFFFTAVAGHIANIIGASSYEIT 61
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ V PE I + I I ++L P GL T++ L A + +S+ VE L+ ++N+A
Sbjct: 62 RKLLSVFIENVPENIIEGIMPYIKEILEGPTHGLLTLTILGAIWTASSIVEGLKAAVNKA 121
Query: 120 YRVVEM---RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
Y + + RLIS LL SV ++ VF+ P + K L L
Sbjct: 122 YNFGTEALVSEYILRRLISVIQFLLISVIIL----VFLLFPTIYPLLTKKVSFLHTLKRP 177
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
W T +F + +++F P K ++PG I W++ ++ F+ Y+ +F+
Sbjct: 178 SWLPYSTITTCCVFFFVSALYIFFPKEKQGFCDVIPGSIMVVSLWILTSIAFSFYLHSFA 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ +Y +A I+ +++ Y+L + FI GAE+NA
Sbjct: 238 QMNIIYGSIAGIIVVMLYFYLLNLCFIYGAEINA 271
>gi|260102705|ref|ZP_05752942.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260083491|gb|EEW67611.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 307
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 107/264 (40%), Gaps = 8/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + + I+ L S+FP I+ N+ + + +P+ ++ I
Sbjct: 23 LSQGEIIDSSIVIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAKYLNLIFPDQVSSFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ + TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKLSMLNSLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + L + + V L + F + + I++ R L + +
Sbjct: 141 LIMVIFTTLMIIIFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKIFSYRYPVIFLIIILA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K K I PGV T W+ + LF+ Y+ F Y + + + +
Sbjct: 201 VFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFPITWKNYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
++L + + F+ G +NA++I
Sbjct: 261 LWLNIASLLFLFGVAVNATIIRNR 284
>gi|313904998|ref|ZP_07838369.1| ribonuclease BN [Eubacterium cellulosolvens 6]
gi|313470255|gb|EFR65586.1| ribonuclease BN [Eubacterium cellulosolvens 6]
Length = 296
Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 97/268 (36%), Gaps = 4/268 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + A+ + LS I L+ + + P
Sbjct: 13 RRKRTVIREEGRGFFHGLGRRNVGTYAASTAFFLFLS---LIPILILLSSLIPSTNMDPE 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + ++++ + L IS + + +S G AL LN AY
Sbjct: 70 RMSHLVTVVTPDVVDGFVSKLIREAYAKSHDLLPISVVTLIWAASQGTVALLRGLNEAYH 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E R + ++S Y + +M V V + + ++ P L R
Sbjct: 130 VKEHRRYLELLILSIIYTAGLIFLVYVMMTV-VFGNQIVDFFQEHMPWLSVPTWFYHRSR 188
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + + ++ PA K LPG +FT + W + F YI F+ Y+
Sbjct: 189 VAISFVLAILIFSLLYKLAPAGYRKFSRQLPGAVFTAVVWEIFTFFFQMYIGGFNRYTMF 248
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELN 269
Y L ++ + ++Y F++G +N
Sbjct: 249 YGSLGTLAIFMFWMYCCFYIFLVGGYIN 276
>gi|302670427|ref|YP_003830387.1| YihY family protein [Butyrivibrio proteoclasticus B316]
gi|302394900|gb|ADL33805.1| YihY family protein [Butyrivibrio proteoclasticus B316]
Length = 265
Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 1/224 (0%)
Query: 46 GANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFS 105
L+ L + V A I I+ + +F+ISA+A+ +
Sbjct: 2 LILLSSVLPYTSLTEEDLVRVMVELTPDFADDIMVRIVGEAYEQSVAVFSISAVASIWTG 61
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ G+ AL LN Y V E R+++ RLI+ Y + V ++IM + V +
Sbjct: 62 ALGMLALIRGLNIIYDVDERRNYFYLRLIAAFYTIAMIVIVLIMLVIMVFGDFVKQLIMN 121
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+P + + N + + ++ F+P+A+ K + LPG +F+ I W V +
Sbjct: 122 AYPHVWTAISFFVNFKFIMVIGIATFAFAMIYTFIPSARMKFIYQLPGALFSAIVWYVFS 181
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
LF+ Y+ TYS +Y LA+ + + +LY F++GA +N
Sbjct: 182 WLFSLYVSLPDTYS-IYGSLATPVIMMFWLYFCIYIFLIGAFIN 224
>gi|238917097|ref|YP_002930614.1| hypothetical protein EUBELI_01167 [Eubacterium eligens ATCC 27750]
gi|238872457|gb|ACR72167.1| Hypothetical protein EUBELI_01167 [Eubacterium eligens ATCC 27750]
Length = 284
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 112/262 (42%), Gaps = 5/262 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+I + E+ AS +LS FPF + +L FL + ++ V++G
Sbjct: 7 LIKRIVTKISEDRIGDYASSACYYLMLSFFPFFIGLLSLIKFLPVSK--ADLLKVIYGVL 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + + L I+A+A + + G A+ L + YR ++W
Sbjct: 65 PTQLQPIVQAMLTDIYDNSTTALTLITAIAIIWAAGKGFMAIVRGLKQIYRKDNQKNWLF 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI---IWNGRIYATML 187
R+ + Y L+ + ++ + V + + K+ P L N+++I I+N + +
Sbjct: 125 QRIRASIYALIFMILIIASLILMVFGNNIMNFTMKYIPQLTNVVVIFRGIFNSKHFLFPS 184
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + K +PG F+ + W + L++ Y+ +S MY LA+
Sbjct: 185 IFTLFFTIAFSLVSRRGKKFYKEIPGAFFSALGWYLFTALYSLYVGHSPNFSYMYGSLAT 244
Query: 248 IMTCLVFLYMLGVFFILGAELN 269
I+ L+++Y + +GAE+N
Sbjct: 245 IIIALIWMYACMIIIFIGAEIN 266
>gi|326334995|ref|ZP_08201195.1| YihY family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692800|gb|EGD34739.1| YihY family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 304
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 110/270 (40%), Gaps = 3/270 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ + AS IS S +++FPF++ NL ++ F +
Sbjct: 36 LYDLLQLYTIGIIRGALTYRASAISYSFFVAIFPFLLVVLNLIPYIPIADFQDDFWVFID 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P D L + + GL + + + + ++NG+ A+ + +Y V R
Sbjct: 96 NLLPPGTHDFFKDIFLDIASKKRAGLLSTVFVLSIFLTTNGINAVFGGFDTSYHVHNTRG 155
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
IS G +L ++ ++++ FF L + + +
Sbjct: 156 VVKQYFISMGVAMLLVFLILFSVILWLSFEYISRM--GFFETLEANRYLFLLAKKIFFIF 213
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ + + F +A+ I G + T + +++ F YI F+ Y+ +Y + +
Sbjct: 214 VTYLSISILFHFG-SAERGIRFFSAGSLLTLVLFILTTYGFGIYIENFAQYNQLYGSIGA 272
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L+++++ +LG ELNAS++
Sbjct: 273 LLIFLLYIWLNSTILLLGFELNASLLKLKK 302
>gi|25027579|ref|NP_737633.1| hypothetical protein CE1023 [Corynebacterium efficiens YS-314]
gi|259507015|ref|ZP_05749915.1| membrane protein [Corynebacterium efficiens YS-314]
gi|23492861|dbj|BAC17833.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165293|gb|EEW49847.1| membrane protein [Corynebacterium efficiens YS-314]
Length = 408
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 54/286 (18%), Positives = 109/286 (38%), Gaps = 18/286 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDV 65
I + F E W + + ++ ++LSV P ++ +L + G + + +
Sbjct: 41 RHAIKRVAKEFFIERLWDLGALLTYFSVLSVAPGLLVAYSLVTLVLASGPLEVLDQAREF 100
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ E + + + V + GL + + A + SS V A N Y
Sbjct: 101 ITRHVAEDQQQIVLSVVDAVAGSASAGLVGLIVGIVVALWTSSAYVRAFSRCANTVYGRA 160
Query: 124 EMRSWYITRLISFG--YVLLASVTLVIMSFVF-------VAIPLALAY-VRKFFPALGNL 173
E R L+ LL V +++S + + P+A + L
Sbjct: 161 EGRFLLKHWLMMVLMNLSLLMGVAAILISLLINETTVMRLFGPIAEPLGLTDVLTYLSET 220
Query: 174 LLIIWNG-RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHY 231
L +WN R A +L L + ++ P K + + G +F + ++ Y
Sbjct: 221 FLPVWNWVRWPAILLILMGLVALLYHLAPNVKPHRFKWLSAGSVFAILGILLAGWGLNIY 280
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
TF+ +++ Y + S+M V +++L + ILG +++A +
Sbjct: 281 FTTFAAFNS-YGAVGSVMALFVGMWILNIVLILGIKIDAEVSRARQ 325
>gi|302522631|ref|ZP_07274973.1| integral membrane protein [Streptomyces sp. SPB78]
gi|302431526|gb|EFL03342.1| integral membrane protein [Streptomyces sp. SPB78]
Length = 411
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 48/262 (18%), Positives = 101/262 (38%), Gaps = 13/262 (4%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVIDVVFGAWPE 72
+E +A+ + LLSV P ++ L G++ F +D +
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLCLVGLLGYVDAWTGADTIAGFEQHFLDASRAVLSD 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + I + + + +I + A + S V ++ Y + +R TR
Sbjct: 61 QGVHDIAEPIFEDVTRGRPDVISIGFVFALWSGSRAVNVFIDTITVMYGLDGVRGIVATR 120
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+SFG ++ + + + VA P V P G + I++ ++ +
Sbjct: 121 LLSFGLFIVGLLVCSVALPLMVAGP---DTVVHLLPWSGLAVQILY---WPVVIILCVVF 174
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L ++ +S + +PG W V + Y+ + T+Y LA+ + L
Sbjct: 175 LTTLYHVSVPVRSPWIEDVPGSFVALAMWFVCSFALRIYLTSTIEGPTIYGSLAAPVAVL 234
Query: 253 VFLYMLGVFFILGAELNASMII 274
+++ + ++GA +NA++
Sbjct: 235 LWIGVSAFAVLVGAAMNAAIDR 256
>gi|312195054|ref|YP_004015115.1| ribonuclease BN [Frankia sp. EuI1c]
gi|311226390|gb|ADP79245.1| ribonuclease BN [Frankia sp. EuI1c]
Length = 452
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 113/276 (40%), Gaps = 11/276 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ A+ + + +A+ LLS+ P ++ G+LG ++ + +
Sbjct: 132 RVAARAMSNAWRDRVLGLAAEAGFWQLLSLPPLLLALLGSIGYLG-DALGSDAVNSIRNS 190
Query: 70 W---------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+V+ + + Q+L + +I + + + S + ++ AY
Sbjct: 191 LLRGADDLLTADVVDDVVRPTVDQILTHGRPDVISIGFVLSLWTGSTAMATFVNTITIAY 250
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++RS +R+++ ++ +T +I+ V P LA + + LL+
Sbjct: 251 GQRDLRSAVRSRIVALRLFIIQVITGIILLPALVLGPGLLAELLRAKHHPTIELLLKSAF 310
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++AL + H LP + LPG +F + W+VG+ + Y+
Sbjct: 311 WPVVAVVALTVLTSLYHQALP-QRRPWRRALPGAVFALVGWLVGSYVLRLYLERVFGNEL 369
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y LA+ L+F Y+ G+ +LGAELNA++
Sbjct: 370 VYGSLAAPAAALLFFYITGLAVLLGAELNAALDQRR 405
>gi|163741955|ref|ZP_02149344.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
gi|161384676|gb|EDQ09056.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
Length = 285
Score = 142 bits (358), Expect = 7e-32, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
G +A+ ++ LLSVFP I L G + + + P A+ +
Sbjct: 1 MGNAHGGLLAAGVAFYGLLSVFPGITAFVALFGLIADPTLITEQSTWLTSLLPSSAAELV 60
Query: 79 TDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+++QV L SA A + +S +++ LN + E RS+ + + +
Sbjct: 61 NQQLVQVAGARPDTLGWAAAASAALALWSASRSTDSVIQGLNVIFGTKEQRSFIVLKAV- 119
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
++ + + + + + I A+ F L I R + G+
Sbjct: 120 ---IVTITFAAICGALLLLLIVAAIPAAVALFGDSALLAGITQLLRWPLMFVVGIAGISL 176
Query: 196 VHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F P + PG I + WV G++ F+ Y+ F +Y+ + L+ ++ L +
Sbjct: 177 LYRFGPDRSGEGWQLFTPGAILSCTLWVAGSIGFSLYVQAFGSYNETFGALSGVILLLTW 236
Query: 255 LYMLGVFFILGAELNAS 271
+++ + GA L+A
Sbjct: 237 MWLSAFVILFGAGLDAE 253
>gi|119385540|ref|YP_916596.1| putative ribonuclease BN [Paracoccus denitrificans PD1222]
gi|119375307|gb|ABL70900.1| putative ribonuclease BN [Paracoccus denitrificans PD1222]
Length = 293
Score = 141 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 116/273 (42%), Gaps = 9/273 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + E + +A+ ++ A+ +VFP + L G Q + + G
Sbjct: 6 WQFVLAIFERMDKIHMSLIAAGVAFYAMFAVFPGLAALFALWGLWNDPQVIEQYVHATDG 65
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ A I +I ++A L IS L A + GV+ L LN AY V
Sbjct: 66 FIPQSAADIIYGQISALVAAGRTQLGWTTAISFLIATVSARAGVDGLIRGLNAAYGVRSH 125
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
S + L+++ L+ + + + V +P+A ++ P + +I A
Sbjct: 126 -STVMGFLLAYVLTLVIVLVIALGLVTIVVVPIAFNFL----PDVPLRNWLIGALPWMAI 180
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSI-LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + ++ + P K+ +I G +F ++W + F+ Y+ +F++Y+ +Y
Sbjct: 181 FFIVLVVIGILYRYGPNVKTPRTAIFTWGSVFAALAWAAASYGFSAYLASFNSYNRIYGS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +++ L++ Y+ G +LGA +N +
Sbjct: 241 IGAVIALLMWFYLGGFTVMLGALINVELSRRRR 273
>gi|289424063|ref|ZP_06425849.1| putative membrane-associated ribonuclease [Peptostreptococcus
anaerobius 653-L]
gi|289155488|gb|EFD04167.1| putative membrane-associated ribonuclease [Peptostreptococcus
anaerobius 653-L]
Length = 282
Score = 141 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 113/268 (42%), Gaps = 6/268 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I I+ F D ++ A+ +S +S+FP ++F ++ V T + +
Sbjct: 5 LNCIRALIQKFDIGDSYSRAAEMSFYLTMSIFPSLIFVICALAYVPEVNVV-TTSEPIKN 63
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + I + ++ L +SA A + S V ++ ++ N Y + ++
Sbjct: 64 IIPAEAHTIVVYFIKSAVTHKSQKLLIVSAGLAVWTFSKAVNSILVAQNAYYGFEDKKNP 123
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN----LLLIIWNGRIYA 184
I +L S + L + +++ V ++ + L +I R
Sbjct: 124 IIAKLTSLIFAALFFIEIILCIVFLVYGSKISEFIIGLLGNVEGSNMVLGIIFTIVRYLV 183
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + + ++ F P+ K LPG + T + W++ ++L++ Y F +Y
Sbjct: 184 PILVMIVIFLGIYSFGPSKKIPYKYCLPGAVVTSLLWLLFSMLYSVYANNFFN-GEIYGS 242
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM 272
+++++ + +LY + +G ++NA +
Sbjct: 243 ISTMIVLMTWLYFCSLSVSVGYKVNALI 270
>gi|323466993|gb|ADX70680.1| Methionine aminopeptidase Map [Lactobacillus helveticus H10]
Length = 289
Score = 141 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 109/267 (40%), Gaps = 8/267 (2%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + + I+ L S+FP I+ N+ + + +P+ ++ I
Sbjct: 5 LSQGEIIDSSIVIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAKYLNLIFPDQVSSFI 62
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ ++ TR
Sbjct: 63 MPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKLSMLNFLWTR 122
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + L + + V L + F + + I++ R L + +
Sbjct: 123 LIMVIFTTLMIIIFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKIFSYRYPVIFLIIILA 182
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K K I PGV T W+ + LF+ Y+ F Y + + + +
Sbjct: 183 VFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFPITWKNYGIVGTFIIFM 242
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
++L + + F+ G +NA++I K
Sbjct: 243 LWLNIASLLFLFGVAVNATIIRNRIGK 269
>gi|318061298|ref|ZP_07980019.1| integral membrane protein [Streptomyces sp. SA3_actG]
Length = 411
Score = 141 bits (357), Expect = 9e-32, Method: Composition-based stats.
Identities = 48/262 (18%), Positives = 101/262 (38%), Gaps = 13/262 (4%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVIDVVFGAWPE 72
+E +A+ + LLSV P ++ L G++ F +D +
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLCLVGLLGYVDAWTGADTIAGFEQHFLDASRAVLSD 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + I + + + +I + A + S V ++ Y + +R TR
Sbjct: 61 QGVHDIAEPIFEDVTRGRPDVISIGFVFALWSGSRAVNVFIDTITVMYGLDGVRGIVATR 120
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+SFG ++ + + + VA P V P G + I++ ++ +
Sbjct: 121 LLSFGLFIVGLLVCSVALPLMVAGP---DTVVHLLPWSGLAVQILY---WPVVIILCVVF 174
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L ++ +S + +PG W V + Y+ + T+Y LA+ + L
Sbjct: 175 LTTLYHVSVPVRSPWIEDVPGSFVALAMWFVCSFALRIYLTSTIEGPTIYGSLAAPVAVL 234
Query: 253 VFLYMLGVFFILGAELNASMII 274
+++ + ++GA +NA++
Sbjct: 235 LWIGVSAFAVLVGAAMNAAIDR 256
>gi|163739520|ref|ZP_02146930.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
gi|161387273|gb|EDQ11632.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
Length = 285
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
G +A+ ++ LLSVFP I L G + + + P A+ +
Sbjct: 1 MGNAHGGLLAAGVAFYGLLSVFPGITAFVALFGLIADPTLITEQSTWLTSLLPSSAAELV 60
Query: 79 TDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+++QV L SA A + +S +++ LN + E RS+ + + +
Sbjct: 61 NQQLVQVAGARPDTLGWAAAASAALALWSASRSTDSVIQGLNVIFGTKEQRSFIVLKAV- 119
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
++ + + + + + I A+ F L I R + G+
Sbjct: 120 ---IVTITFAAICGALLLLLIVAAIPAAVALFGDSALLAGITQLLRWPLMFVVGIAGISL 176
Query: 196 VHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F P + PG I + WV G++ F+ Y+ F +Y+ + L+ ++ L +
Sbjct: 177 LYRFGPDRSGEGWQLFTPGAILSCTLWVAGSIGFSLYVQAFGSYNETFGALSGVILLLTW 236
Query: 255 LYMLGVFFILGAELNAS 271
+++ + GA L+A
Sbjct: 237 MWLSAFVILFGAGLDAE 253
>gi|225873491|ref|YP_002754950.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
gi|225791248|gb|ACO31338.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
Length = 316
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 102/265 (38%), Gaps = 5/265 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAW 70
+ A + + + + SA+LS+FP ++ + F+ +
Sbjct: 5 LQRAGWNAFRHSAFQNSKAAAYSAILSLFPTLLAATTILALAPEGDTFLGELRYGFSQIL 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-RSWY 129
P + Q + L I+ + + + + AL L RA R+ +++
Sbjct: 65 PPDTMLLVQAYF-QPGKGRSAHLVLIAFGISFFAAMGLMLALMEGLRRAERLPRSAWNFW 123
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-PALGNLLLIIWN-GRIYATML 187
R+++ V V + + + ++ L +L+ W R ++
Sbjct: 124 WQRVVAVLLVAGTLVPMFFATLLITFGHFIEHWIVDSAGHELRFYVLLFWRVIRWGIAVV 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ L ++ F + LPG + ++W V +LF Y+ FS Y +Y L +
Sbjct: 184 TSVVMLAMIYHFGVPRRRHWKHALPGAMMATVTWFVSTLLFGWYVTRFSHYQVVYGSLGA 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
M +V+LY++ + + GAE NA +
Sbjct: 244 GMATMVWLYIVSLSILFGAEFNAEV 268
>gi|307329030|ref|ZP_07608198.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
gi|306885392|gb|EFN16410.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
Length = 450
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 111/277 (40%), Gaps = 14/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV--- 62
+ + ++ D ++ +E +A+ + LLS+ P ++ L G+ A TV
Sbjct: 40 RMAWLLLKDTVDSCMEYRVTGLAAEAAFFTLLSLPPLLLGLIGLLGYFDAWTSTDTVATI 99
Query: 63 ----IDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+D + + + + V+ + +I A + S V ++
Sbjct: 100 RQNILDASATVLSDRGVKEIARPLLDDVIKGGRPDVISIGFAIALWSGSRAVNVFVDTIT 159
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + R TRL+SF L+A + + + V P A V P+ G+ + I+
Sbjct: 160 IMYGLEGRRGIVKTRLLSFLLYLVALLVGAVALPLMVIGPEA---VVGLLPSSGDPVRIL 216
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ M+ L ++ +S +PG + WV+G+ L Y+V
Sbjct: 217 Y---WPVVMVLSIAFLTTLYHVSVPVRSPWREDIPGALVALAMWVLGSFLLRIYLVHTVE 273
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 274 GPTIYGSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 310
>gi|298208253|ref|YP_003716432.1| Ribonuclease BN [Croceibacter atlanticus HTCC2559]
gi|83848174|gb|EAP86044.1| Ribonuclease BN [Croceibacter atlanticus HTCC2559]
Length = 307
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 105/260 (40%), Gaps = 2/260 (0%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWPEVIAKP 77
++ AS I+ S ++VFPF++F NL F+ F + + P +
Sbjct: 46 IIKGTFSTRASAIAFSFFMAVFPFLLFMLNLIPFITFIDDFQLEFLTFMDALLPPTTTEF 105
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + GL + + + + + +NGV A+ ++ RS +++ G
Sbjct: 106 FNGIFADIASNQRGGLLSFTFVLSIFLMANGVNAVFTGFEYSFHTSINRSIIRQYMVAVG 165
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
++ ++ L+ V I + + + + + R ++ +++ ++
Sbjct: 166 VSIILALLLLTTVIATVYISYIIDGLTS-MGIFNDDVFWLQIARYGVFVIIVYVITALLY 224
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
G +FT + ++ LF YI FS Y+ +Y + +++ +V++++
Sbjct: 225 YTGTREGKHTSFWSAGALFTTLLIMLTTYLFGIYIENFSNYNELYGSIGTLLILMVYIWI 284
Query: 258 LGVFFILGAELNASMIIYYW 277
+LG ELNAS+
Sbjct: 285 NSNIILLGFELNASIYRLKQ 304
>gi|213962463|ref|ZP_03390725.1| ribonuclease BN [Capnocytophaga sputigena Capno]
gi|213954789|gb|EEB66109.1| ribonuclease BN [Capnocytophaga sputigena Capno]
Length = 303
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 108/272 (39%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ I ++ AS IS S L++FPF++F NL ++ F +
Sbjct: 32 LYDLLELYIVGIMKGTLTYRASAISYSFFLAIFPFLLFILNLIPYIPIDDFQVDFWGFID 91
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P +D + GL + + + +NG+ A+ +Y R+
Sbjct: 92 DMLPPGTHDFFSDIFFDIAEKKRGGLLSSVFFLSIFLMTNGIMAIFGGFEFSYHRQITRT 151
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L + ++ S+ ++ F+ + L + + ++ +I L
Sbjct: 152 YVKQYLYALMVAIILSLLVLFAVVTFIYYEIYLFPYLDKINFITDYETLLKISKIVFVAL 211
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ G + F + G + T + + + LF YI FS Y+ +Y + +
Sbjct: 212 ITYFGTGVLFYFGTVEGKESKFFSAGSLLTVLLFGLTTFLFGIYIENFSQYNQLYGSIGA 271
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L+++++ +LG ELNAS++
Sbjct: 272 LLIFLLYIWINANILLLGFELNASLLKLKKHD 303
>gi|99034616|ref|ZP_01314573.1| hypothetical protein Wendoof_01000616 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 256
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 115/266 (43%), Gaps = 12/266 (4%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV-IDVVFGAWPEVI 74
+ + DG A ++S LLS+FPF++ +A + + P+ I
Sbjct: 1 MIDTIYNDGVEHAGYLSFLILLSIFPFLIVLMAVASTFANFLDQYNIGWVFIIDNMPQDI 60
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ I ++++ P + L T++ + A + +S+ +E LR LN+AY+V + + R++
Sbjct: 61 LSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKAYKVPVSPPYILRRVL 120
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
S L+ ++ + + +P+ + + + R LF +
Sbjct: 121 SILQFLVITLIITLTIVFSTLVPMLIDFSYQGLSY----------TRYLLIEFVLFTVVS 170
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASIMTCLV 253
+++ LP K + + PG I W + A F Y+ +F +Y L ++ L+
Sbjct: 171 WLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQLDLIYGSLGGVVVSLL 230
Query: 254 FLYMLGVFFILGAELNASMIIYYWRK 279
F YML + FI GA+ N + + +
Sbjct: 231 FFYMLSLIFIYGAKFNFQLKYFNESR 256
>gi|189502450|ref|YP_001958167.1| hypothetical protein Aasi_1095 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497891|gb|ACE06438.1| hypothetical protein Aasi_1095 [Candidatus Amoebophilus asiaticus
5a2]
Length = 295
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/271 (20%), Positives = 111/271 (40%), Gaps = 4/271 (1%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I+ I + + D + ++ + L++FP +F L ++ + VP +ID
Sbjct: 19 ILLQIFKELWHRILANDILERSYAVAFNFTLAIFPATIFIFTLIPYISIPELVPKLIDFF 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR--VVE 124
PE I + I L+ GL + + + Y SSNG+ +L + N +
Sbjct: 79 KEGIPETIYGALAPTIQDTLSKHRSGLLSFGFIYSLYLSSNGIMSLIKNFNLVDQPMSHY 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IY 183
RS+ R I+ L + L + + L Y+ + + + I
Sbjct: 139 KRSYLQQRAIATILTLALMLALFSSILLLIVARQILDYMVNYELITHKVHISILPFASSI 198
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L FI + ++ P K IL G + + ++ ++ F++Y+ F Y Y
Sbjct: 199 IVFLIFFIAIAGIYYLAPTNKQNRKFILIGALIATLGCLLASLAFSYYVNHFVKYGL-YG 257
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
L ++ +++L++L + ++G ELN ++
Sbjct: 258 SLGVMIALMLWLFLLSLTLLIGFELNITLTR 288
>gi|328464131|gb|EGF35603.1| ribonuclease BN-like family protein [Lactobacillus rhamnosus MTCC
5462]
Length = 215
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 88/189 (46%)
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
GL I A+A + +S GV L++ N+ Y V +++ I RL+S + + +
Sbjct: 1 GGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQNFIIQRLLSMLMTFTLIIVMGAIL 60
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
F L ++ + L R T+ ALFI ++F+ FLP K K+ ++
Sbjct: 61 IAFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITVTALFIIIMFLDYFLPNVKIKMWTV 120
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
LPG FT I W++ A F+ Y+ F T Y + + + +++L + + GA +NA
Sbjct: 121 LPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIGTFIAIMLWLNFSALVLLWGAVINA 180
Query: 271 SMIIYYWRK 279
Y+ +
Sbjct: 181 LTAEYFIGR 189
>gi|260575792|ref|ZP_05843788.1| ribonuclease BN [Rhodobacter sp. SW2]
gi|259021945|gb|EEW25245.1| ribonuclease BN [Rhodobacter sp. SW2]
Length = 277
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 53/282 (18%), Positives = 113/282 (40%), Gaps = 9/282 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR ++ +++ ++ A+ ++FP + + + +
Sbjct: 1 MRRRAKHAGSFLWSVWLRMENSHFGLISAGVAFYAMFALFPGLTATIAIWSLVSDPSVIS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLN 117
+ + V P A + D+I ++ P L + L A Y + G+ AL L+
Sbjct: 61 SYVKVADEFLPHDAAVLVHDQITALITTPKVHLGWATLLSLGIAVYSARAGISALIQGLD 120
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+R R + F + T+++ V +PL L +V LL +
Sbjct: 121 VVHRAT-PRGLLQGWWVEFVMTMSLITTVLVALATVVIVPLVLNFVTLGVLEGWMLLALP 179
Query: 178 WNGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
W A +L L LI ++ F P + ++ ++PG + W + ++ + Y+ F+
Sbjct: 180 WG----AMVLLLMSCLIILYRFGPNTPQRRVHRVIPGAFLAALVWAMVSIALSAYLANFN 235
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+Y+ +Y + +++ L +LY+ +LGA +NA +
Sbjct: 236 SYNRIYGSIGAVIALLSWLYLSVWSVLLGAAVNAEIPYSRPH 277
>gi|332520817|ref|ZP_08397277.1| ribonuclease BN [Lacinutrix algicola 5H-3-7-4]
gi|332043347|gb|EGI79543.1| ribonuclease BN [Lacinutrix algicola 5H-3-7-4]
Length = 332
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 52/282 (18%), Positives = 111/282 (39%), Gaps = 8/282 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+++++ + + A AS I+ S ++FPF++F + ++ F + +
Sbjct: 49 LYNLLELYVIGIAKGALTARASAIAYSFFTALFPFLLFIIIVIPYIPVPDFENDFLHFLE 108
Query: 68 GAWPEVIAKPITDEILQVLA--VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + +D I + L GL + + A + +NGV AL +Y
Sbjct: 109 SVLPPTTSDFFSDGIFETLKGKNTNSGLLSTVLILAVFLMTNGVNALFSGFENSYHEQLT 168
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPL-----ALAYVRKFFPALGNLLLIIWNG 180
R+ + + G L+ S L+ V + L ++ + N
Sbjct: 169 RNVVKQYVFALGVALILSFLLITTVAVLGYFQIYVVDNILVWLDDYGYDTRRETDFWANL 228
Query: 181 RIYATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
YA + + ++ ++ F G +FT + ++ + LF YI F+ Y+
Sbjct: 229 AQYAFFVVMTYLATATLYYFGTKEGRHAKFFSVGALFTTLLIMLTSYLFGLYIENFARYN 288
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+Y + +++ L +L++ +LG ELN S++ +
Sbjct: 289 ELYGSIGALLILLFYLWLNANILLLGFELNVSLMRLRQKHTK 330
>gi|332877623|ref|ZP_08445367.1| YihY family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684472|gb|EGJ57325.1| YihY family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 299
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 114/277 (41%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + ++D++ I ++ AS I+ S L++FPF++F NL ++ F
Sbjct: 22 LSKNAFSLYDLLELYISGLIKGTLTHRASAIAYSFFLAIFPFLLFILNLIPYIPIDHFQV 81
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ G P + +D + L + + + +NG+ A+ +Y
Sbjct: 82 DFWVFIDGLLPPGTHQFFSDIFFDIAEKRRGSLLSSVFFLSIFLMTNGIMAIFGGFEFSY 141
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R++ L + ++ S+ ++ + F+ + L + L + ++
Sbjct: 142 HIQLTRTYVKQYLYALMVAIILSLLVLFVVITFMGYEIYLVPYLEEINFLTDNETLLKVS 201
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ + +I + F + G FT I + V LF YI FS Y+
Sbjct: 202 KLGFVAVMTYIATSILFYFGTIEGRESKFFSVGSTFTTILFGVTTYLFGIYIENFSQYNQ 261
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+Y + +++ L+++++ +LG ELNA+++
Sbjct: 262 LYGSIGALLIFLLYIWINSNILLLGFELNATLLKLKK 298
>gi|116491549|ref|YP_811093.1| ribonuclease BN-like family protein [Oenococcus oeni PSU-1]
gi|290891155|ref|ZP_06554217.1| hypothetical protein AWRIB429_1607 [Oenococcus oeni AWRIB429]
gi|116092274|gb|ABJ57428.1| Ribonuclease BN-like family enzyme [Oenococcus oeni PSU-1]
gi|290479119|gb|EFD87781.1| hypothetical protein AWRIB429_1607 [Oenococcus oeni AWRIB429]
Length = 282
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 97/220 (44%)
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V T+++ + P ++ I I L + +I L + +S + LR N+
Sbjct: 59 VRTILNYIIQITPSDMSNIIKPIINSFLTNGSNSSLSIGILVTIWSASGLIATLRRCFNQ 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y ++ ++R++SF +LLA + ++ + + L ++ F L +
Sbjct: 119 IYNSSSKQNAIVSRILSFILLLLAFLLFALLLSIMLFGQYLLKLLKNNFGTSLGWLTSLL 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ LF LI ++ F+P AK K + G +FT + W++ A F Y+ F+
Sbjct: 179 GAKNLIGLVGLFSLLILIYYFVPQAKIKWRYVWIGAVFTSLGWLLLAQGFQLYVEYFAQR 238
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ Y + S + + +L ++G +NAS Y+ +
Sbjct: 239 VSSYQTIGSFILLMFWLNFSSSIILIGGVINASCQNYFEK 278
>gi|311744221|ref|ZP_07718025.1| ribonuclease BN family integral membrane protein [Aeromicrobium
marinum DSM 15272]
gi|311312394|gb|EFQ82307.1| ribonuclease BN family integral membrane protein [Aeromicrobium
marinum DSM 15272]
Length = 325
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 51/273 (18%), Positives = 108/273 (39%), Gaps = 8/273 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-------GAHQFVPT 61
+ +I V++ +A+ I+L ++S+ I+ GF+ GA +
Sbjct: 28 WTLIGRTGREAVDDRVPGLAAEIALFTMISLPALILVVLGSLGFVADALGPAGAQELNRI 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V ++ G + + + + +VLA + +I AL + + S ++ AY
Sbjct: 88 VFELPRGFFSDRVYASYENLATRVLADGRADVISIGALLSLWTGSRATNRALETITIAYD 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + RL++ G + + + + + V P + ++ A L ++
Sbjct: 148 IDRPRPGWRRRLLALGLTVAGLLAAIAILPLLVLGPRVVEWLAPEAVA-SATLTVLGALY 206
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L L ++ ++ LPG I W++ A Y+ +
Sbjct: 207 WPVLGLLAITALASLYHLGVPWRTPWRRDLPGAALAMIVWLLAAAGLRAYLAATIGSDAV 266
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++ LA + +++LY+ V +LGAELNA +
Sbjct: 267 FSQLAVPIAIVLWLYVSSVAVLLGAELNAEIER 299
>gi|146278656|ref|YP_001168815.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
gi|145556897|gb|ABP71510.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
Length = 278
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 12/268 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ + D A+ I+ L++FP + + G+ + ID+
Sbjct: 11 WRLLVRLYDRVDSADLNLAAAGIAFYGFLAIFPAVAALIAIWGWASDPSVIRAQIDLAAD 70
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEM 125
PE ++ +LA ++ L S AA + + GV AL LN +R+
Sbjct: 71 FLPEQAYALFRGQVEALLAANSRHLGWASLFTTGAAIWSARAGVAALIRGLNATHRLPNR 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + + L ++ + V PL L + LG+ + A
Sbjct: 131 MGPWHI-VRAIVLTLTLVGVGLVAMLLSVVAPLVLNVI-----PLGDFNQRVLELANVAV 184
Query: 186 -MLALFIGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
ML + G+ V+ P + G++ W + + Y+ F+ Y+ +Y
Sbjct: 185 GMLVVIFGVALVYRLGPNRPKGSPKPVVTWGLLTAVTLWALASRALVFYLANFANYNEVY 244
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNA 270
+ +++ LV+LY+ +LGA ++A
Sbjct: 245 GSIGAVVALLVWLYLSAFAVLLGAAVDA 272
>gi|254424387|ref|ZP_05038105.1| YihY family protein [Synechococcus sp. PCC 7335]
gi|196191876|gb|EDX86840.1| YihY family protein [Synechococcus sp. PCC 7335]
Length = 311
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 119/275 (43%), Gaps = 7/275 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAW 70
+ + + + ++AS ++ +++L +FP I+ G + +
Sbjct: 18 VRRVVRNTFRQRLPSLASEMAYNSMLGLFPAILALFTAIGIFSPLQSTFLKLAQQLSEVA 77
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSW 128
P + + I V P++GLF++S A + SS + A +L++ ++ R +
Sbjct: 78 PAGVPELIYGFEAVVTDQPSRGLFSVSFAFALWASSGAMSAAMRALDQMQQIPIRRRRPF 137
Query: 129 YITRLISFGYVLLASVTLVIMS-FVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATM 186
+ RL+S L L+ S FVF++ + +G+ + W R +
Sbjct: 138 WKARLVSITLTLGTIALLISASCFVFISEWAVGQLIYYSRGDIGSWMAKAWGYSRWPLAL 197
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ F++ F P+ + I+PG + +SW V + LF Y+ F + +Y+ +A
Sbjct: 198 SIMSSAFAFIYRFGPSRWTPGKPIMPGAVLAALSWAVISSLFRLYVAHFGNF--VYSAVA 255
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+++ L++L++ + ++G LN ++ +
Sbjct: 256 TVIVLLLWLWLTSLVMLIGDLLNLTVCRAMIERHK 290
>gi|86742177|ref|YP_482577.1| ribonuclease BN [Frankia sp. CcI3]
gi|86569039|gb|ABD12848.1| ribonuclease BN [Frankia sp. CcI3]
Length = 342
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 111/275 (40%), Gaps = 9/275 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------HQFVPTVIDVV 66
I + +A+ LLS+ P ++ G++G +++
Sbjct: 56 RTITNAWRHRVLGLAAEAGFWQLLSLPPLLLSLLGTLGYVGDAIGADALDSARQSILHGA 115
Query: 67 FGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
G E + + I Q+L+ + +I + + + S + ++ AY E+
Sbjct: 116 GGLLTESVVDDAVRPTIDQILSRGRPDVISIGFVLSLWTGSTAMATFVNTITIAYGQREL 175
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS +RL++ L + VI+ V P ++ + LI
Sbjct: 176 RSAVRSRLLALWLFLAQVASGVILLPALVLGPELISRIFDASRHPLVSTLITLLYWPVVG 235
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++AL + HL LP + LPG I + W+VG+ + +Y+ ++ +Y L
Sbjct: 236 LVALAMLTSLYHLSLP-VRRPWWRALPGAILALVCWLVGSGVLRYYLEIVFSHELVYGSL 294
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S + L+F Y+ + +LGAELNA++ R++
Sbjct: 295 GSPVAALLFFYITALAVLLGAELNAALDEQPPRRR 329
>gi|120435458|ref|YP_861144.1| ribonuclease BN [Gramella forsetii KT0803]
gi|117577608|emb|CAL66077.1| ribonuclease BN [Gramella forsetii KT0803]
Length = 307
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 114/271 (42%), Gaps = 2/271 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVV 66
++++ V AS I+ S +++FPF++F NL ++ F + +
Sbjct: 35 LYNLWIIYWGGIVRGTFSTRASSIAFSFFMAIFPFLLFVLNLIPYITFIDDFQIEFLLFM 94
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + + + P GL +++ + + + +NG+ A+ +Y R
Sbjct: 95 DTLLPPETSDFFGNIFEDIASTPRGGLLSVAFILSIFLMTNGINAIFTGFEFSYHTKTNR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S ++ G L+ ++ L+I V I A+ + + + +
Sbjct: 155 SIPRQYAVAVGVSLILALLLLISVVGAVYITYAIDDLSNLGLVNADGVGAR-LINYIGFV 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ ++ + ++ F + G +FT I ++ VLF+ YI FS Y+ +Y +
Sbjct: 214 ILIYTAVAILYYFGTREARQAKFFSVGALFTTILIMITTVLFSIYITNFSNYNELYGSIG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ + ++++ +LG ELNAS+I
Sbjct: 274 ALLILMFYIWLNSNMLLLGFELNASLIKLKK 304
>gi|320108436|ref|YP_004184026.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
gi|319926957|gb|ADV84032.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
Length = 291
Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 109/267 (40%), Gaps = 6/267 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG-AW 70
+ A + + A ++ SA+ +VFP ++ A L + + + + F
Sbjct: 16 VRRAYWNSFQNGCGTTAKAVAYSAVFAVFPALLVAAACINLLPDVAPLRSELAIFFDRVL 75
Query: 71 PEVIAKPITDEIL--QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRS 127
P +A + + A + + + + ++ + L R Y + +
Sbjct: 76 PANVAPLLQEFFTGGDHRAPQSIRVLIGAGIVGFSGAAGVIATLMEGFRRTYDLPLNAWT 135
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIWNG-RIYAT 185
+ R ++ V ++ + L I S + V L V ++ P + +L + N R
Sbjct: 136 QWQRRGRAYLLVPISLIPLSIASVLVVFGHLITLMVMEWKQPQVQSLFYVTANIVRWTVA 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ A + ++ F + + + PG F I+W + V F Y+ F+ YS +Y L
Sbjct: 196 LSATASVIAMIYRFGTSKELGWHEVFPGAAFATITWFLTTVGFGWYVTRFADYSQVYGSL 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
+ + +V++++ + + GAELNA +
Sbjct: 256 GTGIVLMVWMFLTALSVLCGAELNAEL 282
>gi|322389286|ref|ZP_08062846.1| ribonuclease BN [Streptococcus parasanguinis ATCC 903]
gi|321144030|gb|EFX39448.1| ribonuclease BN [Streptococcus parasanguinis ATCC 903]
Length = 323
Score = 138 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 112/284 (39%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++ + I + + + + ++ L+S+FP ++ AN+ +
Sbjct: 1 MKKVLQKILGQPFIKGFVRFYQSAESDITSIAVAYYLLISIFPLMLIAANILPYFHIRPT 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + P + + + I VL P+ GL + S ++A + S + L+ + N+
Sbjct: 61 --QILLSLQKVLPASLYRIVAQMISSVLTKPSTGLLSFSIISALWIFSQSIAYLQKAYNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+Y V + R RL SF + + + + + Y+ + F + + +
Sbjct: 119 SYGVEKERGIIWGRLFSFLISFALQGLFGLSLILSMFGKMIVRYLYQTFSFDRTIYVRLL 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N L LF+ L+ ++ LP K K +LPG F +F Y+ + +
Sbjct: 179 NLTEPTIYLLLFVSLVLLYYTLPNVKIPKFRYVLPGATFVVAVLYAILNIFWKYVDRYVS 238
Query: 238 YSTMYAGLASIM--TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ + + ++ I+G LNAS+ K
Sbjct: 239 HFLDARFFGSVVLAVIMFWFILVAKIMIIGCILNASIQFAREAK 282
>gi|312867757|ref|ZP_07727963.1| YihY family protein [Streptococcus parasanguinis F0405]
gi|311096820|gb|EFQ55058.1| YihY family protein [Streptococcus parasanguinis F0405]
Length = 323
Score = 138 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 54/284 (19%), Positives = 112/284 (39%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++ V I + + + + ++ L+S+FP ++ AN+ +
Sbjct: 1 MKKVLQKVLGQPFIKGFVRFYQSAESDITSIAVAYYLLISIFPLMLIAANILPYFHIRPT 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + P + + + I VL P+ GL + S ++A + S + L+ + N+
Sbjct: 61 --QILLSLQKVLPASLYRIVAQMISSVLTKPSTGLLSFSIISALWIFSQSIAYLQKAYNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+Y V + R RL SF + + + + + Y+ K F + + +
Sbjct: 119 SYGVEKERGIIWGRLFSFLISFALQGLFGLSLILSMFGKMIVRYLYKTFSFDRTIYVRLL 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N L LF+ L+ ++ LP K K +LPG F +F Y+ + +
Sbjct: 179 NLTEPTIYLLLFVSLVLLYYTLPNVKIPKFRYVLPGATFVVAVLYAILNIFWKYVDRYVS 238
Query: 238 YSTMYAGLASIM--TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ + + ++ I+G LNAS+ K
Sbjct: 239 HFLDARFFGSVVLAVIMFWFILVAKIMIIGCILNASIQFAREAK 282
>gi|294675580|ref|YP_003576195.1| ribonuclease BN [Rhodobacter capsulatus SB 1003]
gi|294474400|gb|ADE83788.1| ribonuclease BN [Rhodobacter capsulatus SB 1003]
Length = 269
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 113/273 (41%), Gaps = 9/273 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + + + + +++ ++ A+L+VFP + ++ + + T ++V
Sbjct: 2 HFLFRLRDRLSQTNIFLISAGVAFYAMLAVFPGLTATISIWSTVADPVVIRTYLEVAQNF 61
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + ++ +LA P + +S L A + + GV+AL LN + E R
Sbjct: 62 IPPEAYAILDAQVSMLLAGPRGVIGWGTLVSVLFALFSARAGVDALVQGLNVIHG-SEPR 120
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L + + +++ VA+P+ + F P +++ A +
Sbjct: 121 NTIFGFLFGYLMTVALVGVMLMAMATIVALPI----LANFLPFHAVTTVLLSGLPWIAMV 176
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L ++ F P + I G + + W ++ T Y+ F TY+ +Y L
Sbjct: 177 ALMLTVLGVLYRFAPYRPRRRDPIFSLGSVVATLVWGGASIGLTTYLANFGTYNKVYGSL 236
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ L++LY+ + GA LNA + +
Sbjct: 237 GAVIALLMWLYLGAFSVLFGAALNAELADRQRQ 269
>gi|296876699|ref|ZP_06900747.1| possible ribonuclease BN [Streptococcus parasanguinis ATCC 15912]
gi|296432201|gb|EFH18000.1| possible ribonuclease BN [Streptococcus parasanguinis ATCC 15912]
Length = 323
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 54/284 (19%), Positives = 113/284 (39%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++ V D I + + + + ++ L+S+FP ++ AN+ +
Sbjct: 1 MKKVIKKVLDQPFIKGFVRFYQSAESDITSIAVAYYLLISIFPLMLIAANILPYFHIRPT 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + P + + + I VL P+ GL + S ++A + S + L+ + N+
Sbjct: 61 --QILLSLQKVLPASLYRIVAQMISSVLTKPSTGLLSFSIVSALWIFSQSIAYLQRAYNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+Y V + R RL SF + + + + + Y+ + F + + +
Sbjct: 119 SYGVEKERGIIWGRLFSFLISFALQGLFGLSLILSMFGKMIVRYLYRTFSFDRTIYVRLL 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N L LF+ L+ ++ LP K K +LPG F +F Y+ + +
Sbjct: 179 NLTEPTIYLLLFVSLVLLYYTLPNVKIPKFRYVLPGATFVVAVLYAILNIFWKYVDRYVS 238
Query: 238 YSTMYAGLASIM--TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ + + ++ I+G LNAS+ K
Sbjct: 239 HFLDARFFGSVVLAVIMFWFILVAKIMIIGCILNASIQFAREAK 282
>gi|288920775|ref|ZP_06415075.1| ribonuclease BN [Frankia sp. EUN1f]
gi|288347851|gb|EFC82128.1| ribonuclease BN [Frankia sp. EUN1f]
Length = 367
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 53/282 (18%), Positives = 106/282 (37%), Gaps = 13/282 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------HQFVPT 61
+ + + +A+ LLS+ P ++ G+LG +
Sbjct: 79 LRLARATVANAWRHRVLGLAAEAGFWQLLSMPPLLLALLGAIGYLGDTLGGDAVDNVRQS 138
Query: 62 VIDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + + I Q+L+ + +I L + + S + ++ AY
Sbjct: 139 ILGGADNLLTASVVDGTVRPTIDQILSRGRPDVISIGFLLSLWTGSTAMATFVNTITIAY 198
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIW 178
++RS +RL++ + T VI+ V P L+ + PA+ LL ++
Sbjct: 199 GQRDLRSAVRSRLLALWLFMAQVATGVILLPALVLGPSLLSDLLDAGRHPAVDELLRDVF 258
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ L ++ + LPG W+VG+ L Y+ +
Sbjct: 259 ---WPVVGVVALAMLTTLYHLALPQRRPWRRALPGAALALFLWLVGSYLLRMYLELVFSN 315
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA+ + L+F Y+ + +LGAELNA++ R +
Sbjct: 316 ELVYGSLAAPVAALLFFYITALAVLLGAELNAALDERPPRPR 357
>gi|239918346|ref|YP_002957904.1| YihY family protein [Micrococcus luteus NCTC 2665]
gi|281415456|ref|ZP_06247198.1| YihY family protein [Micrococcus luteus NCTC 2665]
gi|239839553|gb|ACS31350.1| YihY family protein [Micrococcus luteus NCTC 2665]
Length = 393
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 99/273 (36%), Gaps = 4/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVV 66
+ ++ + +E W +A+ ++ LS+ P +V ++ LG + V +
Sbjct: 21 LLYVLRRTLHRLLELQVWDVAAAMTFFGALSLLPTVVALLSVVSLLGVEEETVDAAAHLA 80
Query: 67 FGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
WP + + + IL + A P G + A+ +S V A +++R + E
Sbjct: 81 AEIWPSLTPDVVREWILTLGSAGPGTGAVVLGAVGTVVSASGAVGAFHRAMHRIHDTREG 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + RL+ F L + V+++ + V + + + +
Sbjct: 141 RPFLHFRLVVFVETLALMLGAVLITILVVVGGDLSLRLGQAVGLPEETVQTWNVVKWPVI 200
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + + + P + + + G + + V F ++ +
Sbjct: 201 LVVIALIVTLAYRLGPNVRQPRYRPLSLGAVAVVVLLFGATVALGWITDRFGQFAVV-GR 259
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ S + L ++ + + GA +A ++
Sbjct: 260 INSAIGVLALAWVACIVLLAGAAFDAEVLRARQ 292
>gi|77464765|ref|YP_354269.1| ribonuclease BN [Rhodobacter sphaeroides 2.4.1]
gi|126463606|ref|YP_001044720.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17029]
gi|221640681|ref|YP_002526943.1| Ribonuclease BN [Rhodobacter sphaeroides KD131]
gi|332559659|ref|ZP_08413981.1| Ribonuclease BN [Rhodobacter sphaeroides WS8N]
gi|77389183|gb|ABA80368.1| ribonuclease BN [Rhodobacter sphaeroides 2.4.1]
gi|126105270|gb|ABN77948.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17029]
gi|221161462|gb|ACM02442.1| Ribonuclease BN [Rhodobacter sphaeroides KD131]
gi|332277371|gb|EGJ22686.1| Ribonuclease BN [Rhodobacter sphaeroides WS8N]
Length = 278
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 101/267 (37%), Gaps = 10/267 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ + D A+ I+ L++FP + + G+ + I++
Sbjct: 11 WRLLVRLYDRVDSADLNLAAAGIAFYGFLAIFPAVAALIAIWGWASDPSVIRAQINLAAD 70
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEM 125
PE ++ +LA ++ L S AA + + GV AL LN +R+
Sbjct: 71 FLPEQAYGLFRGQVEALLAANSRHLGWASLFTTGAAIWSARAGVAALIRGLNATHRLPNR 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + + L ++ + V PL L + P ++ +
Sbjct: 131 MGPWHI-VRAIVLTLTLVGVGLVAMLLSVVAPLVLNVI----PLGDFDQKVLELANVGVG 185
Query: 186 MLALFIGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + G+ V+ P + G++ W + Y+ F+ Y+ +Y
Sbjct: 186 LLVVVFGVALVYRLGPNRPKGSPRPIVTWGLLIAVTLWAAASRGLVFYLANFANYNEVYG 245
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA 270
+ +++ LV+LY+ +LGA ++A
Sbjct: 246 SIGAVVALLVWLYLSAFAVLLGAAVDA 272
>gi|289704650|ref|ZP_06501078.1| YihY family protein [Micrococcus luteus SK58]
gi|289558604|gb|EFD51867.1| YihY family protein [Micrococcus luteus SK58]
Length = 375
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 98/273 (35%), Gaps = 4/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVV 66
+ ++ + E W +A+ ++ LS+ P ++ ++ LG + V +
Sbjct: 3 LLYVLRRTLHRLFELQVWDVAAAMTFFGALSLLPTVIALLSVVSLLGVEEETVDAAAHLA 62
Query: 67 FGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
WP + + + IL + A P G + A+ +S V A +++R + E
Sbjct: 63 AEIWPSLTPDVVREWILTLGSAGPGTGAVVLGAVGTVVSASGAVGAFHRAMHRIHDTREG 122
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + RL+ F L + V+++ + V + + + +
Sbjct: 123 RPFLHFRLVVFVETLALMLGAVLITILVVVGGDLSQRLGQAVGLPEETVQTWNVVKWPVI 182
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + + + P + + + G + + V F ++ +
Sbjct: 183 LVVIALIVTLAYRLGPNVRQPRYRPLSLGAVAVVVLLFGATVALGWITDRFGQFAVV-GR 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ S + L ++ + + GA +A ++
Sbjct: 242 INSAIGVLALAWVACIVLLAGAAFDAEVLRARQ 274
>gi|291165672|gb|EFE27720.1| YihY family protein [Filifactor alocis ATCC 35896]
Length = 298
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 113/266 (42%), Gaps = 4/266 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ +V ++ + ++ +LS+FPF++ + G + + + + +P+ +
Sbjct: 27 LAKRYVADNLSQLGGQLAYFFILSLFPFLIAVNGILGRFDLN--IKEQLGNLSHFFPDNV 84
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + + +F +S + + +++ + +L SLN A+R E +L
Sbjct: 85 IYVLQQYLSHLSHSDHNKMFVMSMIIMIWMATSAIRSLLFSLNHAFR-SERPLSLQKQLA 143
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
SF V+L + + + A V +FF + + R + +
Sbjct: 144 SFPLVVLMILFIFVSLISSSIGKNACETVLRFFKLNQDWTDVWQIIRWIIPFFGVVTIVF 203
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P + G +F+ W+V +++ + Y F YS +Y L +I+ L+F
Sbjct: 204 LLYNIIPDRNFPRKYTIIGALFSVSLWIVTSMILSFYTSNFGRYSIIYGSLGAIIIMLLF 263
Query: 255 LYMLGVFFILGAELNASMIIYYWRKK 280
LY G+ +LG EL A ++ +K+
Sbjct: 264 LYWSGIIIVLGGEL-AHILAMRSQKR 288
>gi|296128677|ref|YP_003635927.1| ribonuclease BN [Cellulomonas flavigena DSM 20109]
gi|296020492|gb|ADG73728.1| ribonuclease BN [Cellulomonas flavigena DSM 20109]
Length = 359
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 120/269 (44%), Gaps = 7/269 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
++ + F+ + +A+ ++ A+L++ P ++ +L + + V +V+D+ GA
Sbjct: 43 VLRTTLREFLGDQCTDLAAALTYYAVLALAPALLAVVSLLSLVDRPEEVVESVVDLAAGA 102
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + ++ VPA G + + A + +S V A +NR Y V E R
Sbjct: 103 GAGDQVDGVRPVLERLTEVPAAGFALVAGLVVALWSASGYVAAFSRGMNRIYEVDEGRPI 162
Query: 129 YITRLISFGYVLLASVTLVIMSFVFV-AIPLALAYVRKFFPALGNLLLIIWN-GRIYATM 186
+ R + + V V++ + V + P+A + L + + +W + +
Sbjct: 163 WKLRPVLLLLTAVLVVIAVLVVALLVLSGPVAESVGGAV--GLSSAAVTVWQVAKWPVVL 220
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + + ++ P + + + G + + WV+ V F Y+ FS+Y Y L
Sbjct: 221 LLVVVAVALLYHGTPNVRQPRFRWLSIGAVVAIVVWVLATVGFGLYVANFSSYDETYGSL 280
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A I+ L++L++ + + GAEL+A +
Sbjct: 281 AGIVVLLLWLWLTNLALLFGAELDAELER 309
>gi|319441494|ref|ZP_07990650.1| ribonuclease BN [Corynebacterium variabile DSM 44702]
Length = 319
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 99/269 (36%), Gaps = 16/269 (5%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAWPEVIAKPITDEIL 83
++ ALL++FP ++ ++ G + V +++ G PE + + +
Sbjct: 1 MDFVGSLAFRALLALFPGLIALVSILALFGQSEESVVRLLNQFEGVTPEDTWESVRPVLE 60
Query: 84 QVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+L P GL I + + +S ++ ++N Y + E R + L + +
Sbjct: 61 SILRAPQAGLGLVIGLVTTLWTASGFIKTFSRTMNAVYGISEGRGVFKWILQMYLLTAMF 120
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + V V + ++ + R + + +G+ ++ P
Sbjct: 121 LLLAAVGLIGSVVAGPVAEAVGELIHLETAVITVWRYVRWVLVIGVVVLGVGMLYRITPN 180
Query: 203 AKSKI--------------MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + G ++ V+ LF Y+ +++ Y LA +
Sbjct: 181 VRVRRTWGGRHFPWYLFWMRWFTVGATIAIVATVLATALFFLYVSKAGSFNATYGALAGV 240
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +++L+++ + GA +++ ++
Sbjct: 241 VVLMLWLFLVNASLVFGALIDSEVVRMRQ 269
>gi|254504096|ref|ZP_05116247.1| YihY family protein [Labrenzia alexandrii DFL-11]
gi|222440167|gb|EEE46846.1| YihY family protein [Labrenzia alexandrii DFL-11]
Length = 305
Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 123/270 (45%), Gaps = 10/270 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ ++ + +++ ++ LL++ P + + +A L V +++ V
Sbjct: 8 DILRRTFVQVQADNVFLISAGVAFFFLLALAPALTAFSAIANLLIPQDAVQDLVNEVGMI 67
Query: 70 WPEVIAKPITDEILQVLAVP-AKGLFT----ISALAAAYFSSNGVEALRISLNRAYRVVE 124
PE ++ I D++ VL + T + + ++ V A+ ++ AYR E
Sbjct: 68 LPESSSQLIKDQLETVLDEHDRQTALTLKAVFGLGLSFWAAAAAVRAMMTAITVAYREEE 127
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L + G + A + ++ F+A+P+AL+ + G+ I R
Sbjct: 128 DRPVWEFHLTALGLTIAALLIGLVAVIAFLALPVALSLLP----LSGSSEFIARLLRWPL 183
Query: 185 TMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++A+ GL + F P+ + K + G I + W+ G++LFT Y+ + Y ++
Sbjct: 184 LIVAVITGLSITYRFAPSRRQAKARWVTVGAIAGALMWIAGSLLFTTYVEKVANYEEVHG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
L+SI+ L++ + V I GAELNA +
Sbjct: 244 ALSSIVVLLLWFWFSAVVAIFGAELNAELE 273
>gi|317470319|ref|ZP_07929712.1| ribonuclease BN family protein [Anaerostipes sp. 3_2_56FAA]
gi|316902227|gb|EFV24148.1| ribonuclease BN family protein [Anaerostipes sp. 3_2_56FAA]
Length = 212
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 98/212 (46%)
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + + I + + + + + +S G+ ++ LN + + E
Sbjct: 1 MNYYLPEQYSVSLVAVINSLYGKITTTYMSFTIITLLWSASKGILSMMTGLNTIHEIPEK 60
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++++ R IS Y+ +V ++I V + L + +F+P L N ++ R
Sbjct: 61 RNYFVLRFISTMYIAFIAVAVLIGIIVLLFGNTLLNQLYQFYPFLSNQHIVFLLIRFGIA 120
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
F+ ++ FLP+ K ++PGVIF+ W++ + LF+ Y F +S MY GL
Sbjct: 121 FFIFFLVFFIMYRFLPSEHFKARQVMPGVIFSSAGWIILSSLFSIYFDNFKFFSIMYGGL 180
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
I+ L +LY + +GAELN ++ +
Sbjct: 181 TGILLTLFWLYFCMMILFIGAELNQYIMKNHK 212
>gi|209523376|ref|ZP_03271931.1| ribonuclease BN [Arthrospira maxima CS-328]
gi|209496118|gb|EDZ96418.1| ribonuclease BN [Arthrospira maxima CS-328]
Length = 387
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 49/306 (16%), Positives = 123/306 (40%), Gaps = 29/306 (9%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFG-ANLAGFLGAHQFVPTV 62
+ + + I+ V++ + +++ ++ + L++ P + A ++ + +
Sbjct: 75 FTYLNWQTIHSLGVRTVQQRLYGLSAEMAYHSTLALVPALFALLAAISSNPSLQSTLLEM 134
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ PE + K I + Q + LF+ S + + + S + + +LNR ++V
Sbjct: 135 ANLLGEVVPEQVQKLIGATMSQSGRSLSPRLFSFSFIISIWLFSGVISSAMEALNRIHQV 194
Query: 123 V--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL---------- 170
++R + ++LI+ L + L++ S + + + L
Sbjct: 195 PPDKIRPVWKSKLIAIALTLGTLLLLIMASGAVFISDFLVEILARKSCILETVGNCPLDK 254
Query: 171 ----------------GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
LL + T+ + ++ + P+ + ++PG
Sbjct: 255 IDMCLAQEPVQDCLLQSTLLDTWNRLQWPITLGIVSTNFALIYRYGPSYRKPKTPLIPGS 314
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
I I W + + LF Y+ Y+ +Y L + + L++L + + +LGA+LN+++
Sbjct: 315 ILAAIFWALISNLFRWYVYQSEYYNVLYGALGTFIVLLLWLNISSLVVLLGAQLNSTVGD 374
Query: 275 YYWRKK 280
R+K
Sbjct: 375 EIRRRK 380
>gi|218460242|ref|ZP_03500333.1| putative ribonuclease protein [Rhizobium etli Kim 5]
Length = 150
Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats.
Identities = 92/150 (61%), Positives = 116/150 (77%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMS 150
RV E R+WY TRL S GYVL+A + +S
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFAAIS 150
>gi|289581131|ref|YP_003479597.1| ribonuclease BN [Natrialba magadii ATCC 43099]
gi|289530684|gb|ADD05035.1| ribonuclease BN [Natrialba magadii ATCC 43099]
Length = 484
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 95/268 (35%), Gaps = 18/268 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ E +++ ++ +S+ P ++ +A +G V +
Sbjct: 13 RRIVRLARTEQLTLLSAGVAFYGFISLVPLMLLALGIAASIGGDALVNQLTAGAGDVLTP 72
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + I+ + + + AL + +S + L + + Y +S T
Sbjct: 73 AAQEVLAETIVDDTGRQSATV--VGALGLLWGASRVLRGLDRAFSEVYGTAGSKSLLDTF 130
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ L S L ++ + + I + ++ +LALF+
Sbjct: 131 WDAMVVFLAISAGLALVGGLELVIQ---------------FVPVVRAIGPLFILLALFVM 175
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ P +PG + + W+ + F+ Y + Y +Y L ++ L
Sbjct: 176 FLPLYIVFPGKDVGFREAIPGALLAAVGWLALSRAFSLYANVATGY-ALYGALGAVFLVL 234
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKK 280
++LY + I GA NA + ++
Sbjct: 235 IWLYAGAIILIFGAICNAVLAGREVDRQ 262
>gi|239981438|ref|ZP_04703962.1| hypothetical protein SalbJ_18513 [Streptomyces albus J1074]
gi|291453289|ref|ZP_06592679.1| membrane protein [Streptomyces albus J1074]
gi|291356238|gb|EFE83140.1| membrane protein [Streptomyces albus J1074]
Length = 336
Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 104/267 (38%), Gaps = 5/267 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + F +D A+ ++ A+L+V P ++ G + + V
Sbjct: 21 WVALRRTPGAFWRDDVSDFAAALTYYAILAVLPALLVVVIAFGLVS-PDTAERFVGQVTA 79
Query: 69 AWPEVIAKPITDEILQVL--AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + + +V+ A L +A + +S+ + R +L+R Y V + R
Sbjct: 80 WAPGGSGASLREVLTRVVRVDSTAWTLLVTGGASALWSASSYLAVSRRALHRMYGVRDRR 139
Query: 127 SWY-ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
S + I + L ++ LV + + P+A + + + + R
Sbjct: 140 SPWGKAHRIVATALALLALLLVSSLLLMLTEPVAES-IGRLLGLDAGVAWAWSVLRWPLL 198
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + ++ V P A + +PG W+ + Y STYS +Y L
Sbjct: 199 LCLVACLVVVVFRNGPVAARRRAHSIPGGALAATLWLTASAGLALYASVLSTYSRLYGSL 258
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
A I+ LV+L++ V +LGA+ A +
Sbjct: 259 AGIVVFLVWLWLSNVALLLGAQFTAEL 285
>gi|300811818|ref|ZP_07092288.1| YihY family protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497188|gb|EFK32240.1| YihY family protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 304
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 111/276 (40%), Gaps = 9/276 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V + + + + + I+ L S+FP ++ N + + D +
Sbjct: 12 VRRFLTTLSSVVSQGEIFQSSIVIAYYILFSIFPIVIIVGNALPWFHL--ATGPIADYLE 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-- 125
+P +A+ I + +L + + A+ A + S V A+RI +NR Y V
Sbjct: 70 MIFPSDVARYIIPIVDTLLKSNSTSYISFGAIMALWSMSCMVNAVRIGMNRLYGVHNKEL 129
Query: 126 ----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R ++ + L ++++ V V L ++ +F + + + R
Sbjct: 130 KLGFWHFIWNRTLTMIFSALMVTMFILLALVVVFGQEVLHFLAPYFNLPLAWIDKLSSYR 189
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + IG+ +++ P K ++LPG I T W + LF+ Y+ F
Sbjct: 190 WLVLLVLMLIGVYYLNAVAPNVHFK-KALLPGSIVTVAGWEALSYLFSFYLKNFPVKWEN 248
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L +L + + G +N S+ +
Sbjct: 249 YGIVGTFIIFMLWLNLLAILLLFGTAVNVSLDQLRY 284
>gi|262282974|ref|ZP_06060741.1| ribonuclease BN family protein [Streptococcus sp. 2_1_36FAA]
gi|262261226|gb|EEY79925.1| ribonuclease BN family protein [Streptococcus sp. 2_1_36FAA]
Length = 297
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 108/267 (40%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I + + + + ++ L+S P ++ AN+ + +++++
Sbjct: 12 QFLRAFIGFYDKSEIGMTSIAVAYYFLISALPLLLVLANILPYFQVQ--TDALLNLLNEI 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + + + V P+ GL S L+A + S + L+ + N+AY V +
Sbjct: 70 LPDSLYPMVAKAVRAVFGQPSSGLLGFSILSALWAFSKCISFLQKAFNKAYGVTKGHGLL 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL SF + + L++ + V L V F + I L L
Sbjct: 130 RNRLFSFVVSIGLQILLILSMILSVFGRSILTVVYNVFDLDVSFYRQITTITEGLVFLVL 189
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS- 247
F+ L+ ++ LP K K+ +LPG IF LF+ Y+ + + S
Sbjct: 190 FLTLVALYYLLPNVKINKLRYVLPGTIFVVGILFGLLNLFSAYLEAYMHHFINVRFFGSV 249
Query: 248 -IMTCLVFLYMLGVFFILGAELNASMI 273
++ +++ ++ I+GA LNAS+
Sbjct: 250 VVIIIMLWFIIVSKILIIGAILNASIQ 276
>gi|157151368|ref|YP_001450676.1| ribonuclease BN family protein [Streptococcus gordonii str. Challis
substr. CH1]
gi|157076162|gb|ABV10845.1| ribonuclease BN-family, putative [Streptococcus gordonii str.
Challis substr. CH1]
Length = 297
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 107/267 (40%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I + + + + ++ L+S P ++ AN+ + +++++
Sbjct: 12 QFLRAFIGFYDKSEIGITSIAVAYYFLISALPLLLVLANILPYFQVQ--TDALLNLLNDM 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + + + V P+ L S L+A + S + L+ + N+AY V +
Sbjct: 70 LPDSLYPMVAKAVRAVFGQPSSSLLGFSILSALWAFSKCISFLQKAFNKAYGVTKGHGLL 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL SF + + L++ + V L V F + I L L
Sbjct: 130 RNRLFSFVVSIGLQILLILSMILSVFGRSILTVVYNVFDLDVSFYRQITTITEGLVFLVL 189
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F+ L+ ++ LP K K+ +LPG IF LF+ Y+ + + S+
Sbjct: 190 FLTLVALYYLLPNVKINKLRYVLPGTIFVVGILFGLLNLFSAYLEAYMNHFINVRFFGSV 249
Query: 249 --MTCLVFLYMLGVFFILGAELNASMI 273
+ +++ ++ I+GA LNAS+
Sbjct: 250 VAIIIMLWFIIVSKILIIGAILNASIQ 276
>gi|311893960|dbj|BAJ26368.1| putative ribonuclease [Kitasatospora setae KM-6054]
Length = 336
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 91/273 (33%), Gaps = 2/273 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + DA F DG++ A ++ +L++ PF + LAG L V V+
Sbjct: 29 WALARDAFVRFRYADGFSHARALAFQVVLALVPFTIAVVGLAGSLHGGPVGRLVAAVIER 88
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE + + + + + AL A + + NR Y + R
Sbjct: 89 MVPEPSSDLVREVLDRGREHTGGTFALWFGALFALANLVTAMSQIERGANRIYGIERDRP 148
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ S A + L V VA P A + F R +L
Sbjct: 149 FDRKYGRSLLMAAGAGLPLGAGFLVLVAGPQLAAAADEVFGLGPRTATAWTLLRWPVGVL 208
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ P + S L G + W+ L + Y+ ++ +Y L+
Sbjct: 209 LTLTSAAVIFRRAPRRRQPGYSWLAFGAGLYLVLWLAATWLLSLYLRLSGSFDAVYGPLS 268
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + LV+ Y+ + LG A + +
Sbjct: 269 AVFSLLVWAYLTAIALFLGLSFAAQLEAVRTAR 301
>gi|239916828|ref|YP_002956386.1| YihY family protein [Micrococcus luteus NCTC 2665]
gi|281414712|ref|ZP_06246454.1| YihY family protein [Micrococcus luteus NCTC 2665]
gi|239838035|gb|ACS29832.1| YihY family protein [Micrococcus luteus NCTC 2665]
Length = 360
Score = 134 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 54/287 (18%), Positives = 109/287 (37%), Gaps = 25/287 (8%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGA 69
+ A++ F + G +A+ ++ +LS+ P ++ ++ + A + ++ + G
Sbjct: 33 LTRALKEFGNDGGTDLAAKLTYYLVLSLAPSLLAVFSILSLVLASNRGAIDDLLGQLTGL 92
Query: 70 WPEVIAKPITDEILQVLAVPAKG----LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +T+ + + G I A + +S V+A S N Y E
Sbjct: 93 VPSDYQPLVTNLVTTMSDSADSGGGIVALIIGIATALWSASAYVKAFNRSANTVYGYEEG 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVF-------------VAIPLALAYVRKFFPALGN 172
R L + L+ V +V + +A PL + L +
Sbjct: 153 RGLVKLTLTNLLTTLILIVGIVAVLLSLALNRSLVDGFLQPIAGPLGM---TGVVNFLSD 209
Query: 173 LLLIIWNG-RIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTH 230
L +W + ++ L + + ++ P K + PG I + V+ AV +
Sbjct: 210 TFLPVWAWVKWPVVVVILLVLIATLYYTTPNVQKPRFHLFGPGNIVALVGMVLAAVALSV 269
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y F+ YS Y + +IM L L++ + +LG E++A +
Sbjct: 270 YFTQFAGYSA-YGAIGTIMALLFALWIFNIVLLLGLEVDAEVERARQ 315
>gi|325684541|gb|EGD26704.1| putative ribonuclease BN [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 304
Score = 134 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 50/264 (18%), Positives = 109/264 (41%), Gaps = 9/264 (3%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
+ + + + I+ L S+FP ++ N + + D + +P +A+ I
Sbjct: 24 SQGEIFQSSIVIAYYILFSIFPIVIIVGNALPWFHL--ATGPIADYLEMIFPSDVARYII 81
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM------RSWYITRL 133
+ +L + + A+ A + S V A+RI +NR Y V + R
Sbjct: 82 PIVDTLLKSNSTSYISFGAIMALWSMSCMVNAVRIGMNRLYGVHNKELKLGFWHFIWNRT 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ + L +I++ V V L ++ +F + + + R ++ + IG+
Sbjct: 142 LTVIFSALMVTMFIILALVVVFGQEVLHFLAPYFNLPLAWIDKLSSYRWLVLLVLMLIGV 201
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ P K ++LPG I T W + LF+ Y+ F Y + + + ++
Sbjct: 202 YYLNAVAPNVHFK-KALLPGTIVTVAGWEALSYLFSFYLKNFPVKWENYGIVGTFIIFML 260
Query: 254 FLYMLGVFFILGAELNASMIIYYW 277
+L +L + + G +N S+ +
Sbjct: 261 WLNLLAILLLFGTAVNVSLDQLRY 284
>gi|313123266|ref|YP_004033525.1| ribonuclease bn-like family enzyme [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|312279829|gb|ADQ60548.1| Ribonuclease BN-like family enzyme [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
Length = 304
Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 111/276 (40%), Gaps = 9/276 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V + + + + + I+ L S+FP ++ N + + D +
Sbjct: 12 VRRFLTTLSSVVSQGEIFQSSIVIAYYILFSIFPIVIIVGNALPWFHL--ATGPIADYLE 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-- 125
+P +A+ I + +L + + A+ A + S V A+RI +NR Y V
Sbjct: 70 MIFPSDVARYIIPIVDTLLKSNSTSYISFGAIMALWSMSCMVNAVRIGMNRLYGVHNKEL 129
Query: 126 ----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R ++ + L +I++ V V L ++ +F + + + R
Sbjct: 130 KLGFWHFIWNRTLTVIFSALMVTMFIILALVVVFGQEVLHFLAPYFNLPLAWIDKLSSYR 189
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + IG+ +++ P K ++LPG I T W + LF+ Y+ F
Sbjct: 190 WLVLLVLMLIGVYYLNAVAPNVHFK-KALLPGTIVTVAGWEALSYLFSFYLKNFPVKWEN 248
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L +L + + G +N S+ +
Sbjct: 249 YGIVGTFIIFMLWLNLLAILLLFGTAVNVSLDQLRY 284
>gi|119716581|ref|YP_923546.1| ribonuclease BN [Nocardioides sp. JS614]
gi|119537242|gb|ABL81859.1| ribonuclease BN [Nocardioides sp. JS614]
Length = 327
Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 117/283 (41%), Gaps = 17/283 (6%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+V+ + + ++ +A+ + A+LSV P I A G++ QF P + V
Sbjct: 29 VVWRLFVTTVASCLKYRVTGLAAEAAFFAVLSVPPLIFAMAGAIGYVT-DQFSPAQVADV 87
Query: 67 FGAWPE---------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
A + + K I I VL + ++ + A + S + ++
Sbjct: 88 RAAVVDLSARALTDGAVHKIIEPTIDDVLRGGRFDVISLGFVLALWSGSRALNVFVDTIT 147
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + R TR +SF +LA VT V+ + +A P + L L ++
Sbjct: 148 IMHGLGGHRGIVKTRALSFLLYVLAMVTGVVTIPLVIAGPSLVE------DWLPERLDLL 201
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ L ++ ++ LPG F+ WVVG+ L ++ +T
Sbjct: 202 MGFYWPVVTVVCICFLATLYHVSVPVRTNWSFNLPGATFSLFCWVVGSYLLRWFLTVTAT 261
Query: 238 YS-TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S ++Y LA+ + L++LY++ + ++GA +NA+ + +K
Sbjct: 262 DSRSIYGPLAAPIAVLLWLYLVSIAVLIGAAVNAAFDTVFPQK 304
>gi|297191204|ref|ZP_06908602.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297150821|gb|EDY62426.2| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 370
Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 108/277 (38%), Gaps = 14/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------HQF 58
+V+ ++ D + +E +A+ + LLSV P ++ L G++
Sbjct: 29 KMVWLLLKDTVNSCIEYRILGLAAEAAFFTLLSVPPLMLGLIGLLGYIDDWTNTTTVASI 88
Query: 59 VPTVIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
++ V + + + V L +I A + S V ++
Sbjct: 89 EENILTAVGTVLSDRGVNDIAKPLLEDVTQGGRPDLISIGFAIALWSGSRAVNVFIDTIT 148
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + R TRL++F ++A + ++ + V P V + P ++ I+
Sbjct: 149 VMYGLDGHRGIVATRLLAFLLYIVALLIGAVVLPLAVVGP---DRVVELMPWGTEVVRIL 205
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ML L ++ +S + +PG + W++G+ L Y+ +
Sbjct: 206 Y---WPVVMLLSIAFLTTLYHVSVPVRSPWVEDIPGALVALGMWILGSFLLRIYLTSQVE 262
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 263 GPTIYGSLAAPIAFLLWIGISAFAVLVGAAVNAAIDR 299
>gi|223937010|ref|ZP_03628918.1| ribonuclease BN [bacterium Ellin514]
gi|223894291|gb|EEF60744.1| ribonuclease BN [bacterium Ellin514]
Length = 345
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 53/286 (18%), Positives = 110/286 (38%), Gaps = 11/286 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M V+ ++ ++ +F+ ++ + + +S +L++ P V +AG + H V
Sbjct: 1 MASTLKAVWGLLKQSVNNFINDNAQRLGAALSYYTVLALPPLFVILFFVAGLVLRHHDVQ 60
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNR 118
V + V G + + I + + + A+ A +S G L+ +LN
Sbjct: 61 KDVFNQVGGLIGKQGGEAIKSIMANPQQQQKGFVASAIAIGALLVTSTGLFLELQNALNS 120
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V E + RL+SFG +++ L++ V A+ Y P L L
Sbjct: 121 IWGVREKPGQGVTGFIKNRLLSFGMIVIIGFLLLVSMVVSTALTALNKYFAGLVPDLHIL 180
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I+ + + + + + LP K + G T + +G Y+
Sbjct: 181 WQILN---VVVSFGVITVLFAMLFKVLPDVKIAWKDVWIGAAITAFLFTLGKFGLGLYLG 237
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+T ++ Y S++ L+++Y GAE+ + + K
Sbjct: 238 KSAT-ASAYGAAGSLVIILLWVYYSAQILFFGAEVTQAYACRFGEK 282
>gi|309811250|ref|ZP_07705041.1| YihY family protein [Dermacoccus sp. Ellin185]
gi|308434790|gb|EFP58631.1| YihY family protein [Dermacoccus sp. Ellin185]
Length = 389
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 105/278 (37%), Gaps = 14/278 (5%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQ 57
V ++ + + + +AS ALLS P + + G++G
Sbjct: 27 LYAVCRLVLETLRQCMRYRVTGLASEAGFFALLSFPPLVYGLLGVMGYVGGALGGRTVDD 86
Query: 58 FVPTVIDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
V ++ + G + + + L + +I L + + S + + ++
Sbjct: 87 IVRSIERYLEGILSGEALQNVVMPTLHDALEGGRPDVVSIGFLLSLWSGSRMINVIVDTI 146
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ Y +R R +S ++ + + + + V P L + L LL
Sbjct: 147 SIMYGQGGVRGIVRARALSVTLYFVSLLFIGAVLPLIVIGPDLLGRM------LPPGLLF 200
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ +G ++ ++ + LPG FT I+WV+ ++ ++
Sbjct: 201 LLTLYWPVVGAITIVGFATLYYIATPVRTPWVRDLPGAGFTLIAWVIISLFLRSWLSASV 260
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++Y LA+ + L++LY L + ++GA LN+++
Sbjct: 261 GGISIYGPLAAAIIALIWLYSLSIAVLIGAALNSAVAR 298
>gi|328461932|gb|EGF34140.1| hypothetical protein AAULH_03626 [Lactobacillus helveticus MTCC
5463]
Length = 282
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 8/252 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + + I+ L S+FP I+ N+ + + +P+ ++ I
Sbjct: 23 LSQGEIIDSSIVIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAKYLNLIFPDQVSSFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ ++ TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKLSMLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + L + + V L + F + + I++ R L + +
Sbjct: 141 LIMVIFTTLMIIIFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKIFSYRYPVIFLIIILA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K K I PGV T W+ + LF+ Y+ F Y + + + +
Sbjct: 201 VFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFPITWKNYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFIL 264
++L + + F +
Sbjct: 261 LWLNIASLLFFI 272
>gi|302541789|ref|ZP_07294131.1| putative integral membrane protein [Streptomyces hygroscopicus ATCC
53653]
gi|302459407|gb|EFL22500.1| putative integral membrane protein [Streptomyces himastatinicus
ATCC 53653]
Length = 390
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 106/274 (38%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G+ A TV +
Sbjct: 3 WLLLKDTVNSCMEYRVTGLAAEAAFFTLLSLPPLLLGLIGLLGYFDAWTDTDTVATIRQN 62
Query: 69 AWPEV--------IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + V+ + ++ A + S V ++ Y
Sbjct: 63 ILDASGTVLSDKGVKEIARPLLDDVIEGGRPDVISLGFGIALWSGSRAVNVFVDTITIMY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F L+A V + + V P V F P+ L+ +++
Sbjct: 123 GLEGRRGIVRTRLLAFLLYLVALVIGAVALPLMVIGP---ETVVDFVPSSATLVRVLY-- 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ +S +PG + WV+G+ L Y++ T
Sbjct: 178 -WPTVILLSVAFLTTLYHVSVPVRSAWREDIPGALVALTMWVLGSFLLRIYLIHTVEGPT 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 237 IYGSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 270
>gi|282864766|ref|ZP_06273820.1| ribonuclease BN [Streptomyces sp. ACTE]
gi|282560191|gb|EFB65739.1| ribonuclease BN [Streptomyces sp. ACTE]
Length = 399
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 107/274 (39%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPT 61
+ +I D + +E +A+ + LLS+ P ++ L G++
Sbjct: 32 WRLIKDTVNSCMEYRILGLAAEAAFFTLLSLPPLLLGLIGLLGYVDEWTSTTTVASIERN 91
Query: 62 VIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ V E + + V + +I A + S V ++ Y
Sbjct: 92 ILSAVQTVLSERGVNDIAKPLLEDVTTGARPDVISIGFAIALWSGSRAVNVFIETITVMY 151
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A V ++ + V P V +F P LL +++
Sbjct: 152 GLDGHRGIVKTRLLAFLLYVVALVLGSVVLPLLVVGP---DRVVEFVPWGTELLAVLY-- 206
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ L ++ +S M +PG + WV+G+ L Y+ + T
Sbjct: 207 -WPLVIVLSIAFLTTLYHVSVPVRSPWMEDVPGALVALAMWVLGSFLLRIYLTSTVEGPT 265
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 266 IYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 299
>gi|157963720|ref|YP_001503754.1| ribonuclease BN [Shewanella pealeana ATCC 700345]
gi|189039573|sp|A8H9I2|Y3909_SHEPA RecName: Full=UPF0761 membrane protein Spea_3909
gi|157848720|gb|ABV89219.1| putative ribonuclease BN [Shewanella pealeana ATCC 700345]
Length = 340
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 112/279 (40%), Gaps = 16/279 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + ++ + F E+ A H++ LLS+ P + ++ +
Sbjct: 11 RSFLLSIWAFFLHLLSRFKEDQVNIKAGHLAYVTLLSLVPIVAVMFSMLSAFPVFSGIRE 70
Query: 62 VID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ V+ + + I + +A +KG ++ +A + + A+ +LN +
Sbjct: 71 KLEGFVYDNFLPAAGDTVQIYINEFVANASKG-TSVGIVALMVVALMLISAIDKALNSIW 129
Query: 121 RVVEMR----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
R E R S+ + ++ +L +LV S++ + + P L L
Sbjct: 130 RTKEKRQAAVSFSMYWMVLTLGPVLVGASLVATSYIVSLKLFSETELSGVVPILIERL-- 187
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
ML + +++ +P K K + L G + + + +G F Y+ F
Sbjct: 188 --------PMLFSVAAFLLLYMVVPIKKVKFLHALLGALVAAMLFELGKKGFAFYVTQFP 239
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y +Y LA+I V++Y+ V ++GAE+ A + Y
Sbjct: 240 SYEAIYGALATIPILFVWVYVSWVIVLVGAEITAGLPEY 278
>gi|311895405|dbj|BAJ27813.1| putative ribonuclease [Kitasatospora setae KM-6054]
Length = 405
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 108/278 (38%), Gaps = 14/278 (5%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQ 57
+ ++ ++ D VE +A + LLS+ P ++ A G+L +
Sbjct: 38 YGTLWALVKDTTNTCVEYRVTGLAGEAAFFTLLSIPPLLLCLAGTLGYLDDILGAGTIDK 97
Query: 58 FVPTVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
++ I + + + V L ++ L + + S + ++
Sbjct: 98 LKQDIVSASGTVLSQSSIDEIVQPLLRDVFDSARPDLISLGFLLSLWSGSRALYIFIDTI 157
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
Y + R TRL+S G L A V ++ + VA P L + +
Sbjct: 158 TVMYGLDGKRGLVKTRLMSLGLYLGALVIGSLVLPLLVAGPGLL------IGTFQSWAGV 211
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I A ++ L + L ++ + +PG + + VV +V Y+V+
Sbjct: 212 INALYWPAAIVLLVVFLTSLYHVAVPVSTPWREDIPGALVALLVLVVCSVALRLYLVSSV 271
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++Y LA+ + L++++++ + ++GA +NA++
Sbjct: 272 EGHSVYGSLAAPVAVLLWIFVVALAVLIGAAMNAAIDR 309
>gi|260063160|ref|YP_003196240.1| hypothetical protein RB2501_00081 [Robiginitalea biformata
HTCC2501]
gi|88783254|gb|EAR14426.1| hypothetical protein RB2501_00081 [Robiginitalea biformata
HTCC2501]
Length = 323
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 118/283 (41%), Gaps = 13/283 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL------GAHQFVPT 61
+FD+I + AS I+ S L++FP ++F L F+ G F
Sbjct: 35 LFDLIVMYARGIIRGALSTRASAIAFSLFLAIFPLLIFLVTLIPFVIPLVSVGNSNFDAQ 94
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + P+ + T+ Q+ GL + + L + +NGV A+ +Y
Sbjct: 95 FLSFLEAFLPQATGEYFTEVYQQIRDQKQGGLVSSAFLISILLMANGVNAIFGGFENSYH 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF------FPALGNLL 174
+ R+++ + L+ SV L++ + +V L Y+ +F +
Sbjct: 155 IELTRNFFKQYAYALFVGLILSVLLIVGAVFYVYFEFYVLGYLTEFTARNSGVVLDEGEI 214
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
L + G++ +L ++ ++ F K G + T + ++ + LF YI
Sbjct: 215 LGVRVGKVLFFILLTYLTTAILYYFGTTEGKKAKFFSYGALMTTLLILLTSYLFGVYIDN 274
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ Y+ +Y L+ ++ ++++++ +LG ELNA++
Sbjct: 275 FARYNELYGALSGLLILMIYIWLNSNILLLGFELNATLNYLRK 317
>gi|295093026|emb|CBK82117.1| Predicted membrane protein [Coprococcus sp. ART55/1]
Length = 330
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 120/276 (43%), Gaps = 9/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ +++ + + ++ A A+ + LLS+FP + +L +
Sbjct: 3 LKKRIVLIYHKVRLFMAEMNKDQVAAFAAQSAFFLLLSLFPLAMTLLTFVKYLPFTET-- 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRA 119
V++++ +PE I ++ + L T + L + +S G A+ L
Sbjct: 61 QVLEIIKELFPEEINSNFEFMFAEIFDSKSSLLATTATILLTVWSASKGTMAIGRGLTFM 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV------RKFFPALGNL 173
+ ++++ R I Y L+ V LV + +++ + ++ + + F + +
Sbjct: 121 AGKEDSVNYFLRRAIHTLYTLIFCVMLVAVMVIYILGDVVVSKMLVRLDSVERFQLVDTV 180
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I+ +I LF +I + LP + +I + +PG FT I W++ + + YI
Sbjct: 181 ANILSIVKIAFAPTVLFGVMIVAYWALPVERVRIKTAVPGAAFTTILWMLLSFGVSSYIN 240
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ MY LAS++ ++LYM ++GAE+N
Sbjct: 241 IVGINTYMYGSLASVILLALWLYMCMYVMLIGAEIN 276
>gi|228473536|ref|ZP_04058289.1| ribonuclease BN [Capnocytophaga gingivalis ATCC 33624]
gi|228275143|gb|EEK13946.1| ribonuclease BN [Capnocytophaga gingivalis ATCC 33624]
Length = 306
Score = 132 bits (333), Expect = 6e-29, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 105/273 (38%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ V+ AS IS S +++FPF++ NL ++ F +
Sbjct: 35 LYDLLLLYTIGIVKGALTYRASAISYSFFVAIFPFLLVVLNLIPYIPIDDFQQDFWVFLD 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + GL + + + + ++NG+ A+ +Y V R
Sbjct: 95 SLLPPGTHGFFEEIFFDIAGKKRAGLLSTVFVLSIFLTTNGINAVFGGFEYSYHVRATRG 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
IS G +L ++ +++A K F + + +
Sbjct: 155 ALKQYFISMGVAMLLVFLILFSVILWLAFEYIQGM--KIFSFFNSNPYFFPIVKKVFFIF 212
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ + + F + + G + T I +++ F YI F+ Y+ +Y + +
Sbjct: 213 VAYLVVSILFHFGTIDRGR-RFFSAGSLLTLILFILTTYGFGVYIENFAQYNQLYGSIGA 271
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ L+++++ +LG ELNAS+ K
Sbjct: 272 LLIFLLYIWLNATILLLGFELNASLSNLRRVKN 304
>gi|332186510|ref|ZP_08388254.1| hypothetical protein SUS17_1621 [Sphingomonas sp. S17]
gi|332013493|gb|EGI55554.1| hypothetical protein SUS17_1621 [Sphingomonas sp. S17]
Length = 385
Score = 132 bits (332), Expect = 7e-29, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 7/265 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + + +D AS I+ +A L++ P I G V + +
Sbjct: 110 LLVRTVRSALHDDFGIAASSIAFAAFLAMIPLIGLITGAYGLFAPPTSVAHNLRTLTAIL 169
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + LA L T+ S A + + +L +N AYR+ R
Sbjct: 170 PADARQIVVGGLHNTLASHRADLVTLLASLGIALFSARRAGRSLLHGINLAYRIDRERRG 229
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ S VL + ++ + +YV P I+ G +
Sbjct: 230 LRRQIASTLLVLGCAALVLTALVSLSVLAFLKSYVPDGLPGARTASTILLFGSLTLGAGG 289
Query: 189 LFIGLIFVHLFLPAAK--SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L+ ++ + PAA+ ++PG I W+ LF Y+ + + Y L+
Sbjct: 290 ---ALLLIYRYAPAAEEPIPWRRVVPGTIAAVAMWLGATTLFRAYVAHVARFDDTYGSLS 346
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+++ +++L + +LGA LNA
Sbjct: 347 AVIVLMLWLLVSAWALLLGARLNAE 371
>gi|325955208|ref|YP_004238868.1| ribonuclease BN [Weeksella virosa DSM 16922]
gi|323437826|gb|ADX68290.1| ribonuclease BN [Weeksella virosa DSM 16922]
Length = 328
Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 116/270 (42%), Gaps = 6/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DV 65
++D++ ++ + + I+ + S+FPFI+F +L + ++ + ++
Sbjct: 30 LYDLLKVFWIRVMKGNFPVRSGAIAWTLFFSLFPFILFLFSLLPKIPHYEELKLLLFHQF 89
Query: 66 VFGAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAY-RVV 123
+ P I K + I K + + + SSNGV+ + N +Y V
Sbjct: 90 LPQIIPNSIGKEVIGYIDITTQQQEQKSVNWWFMIFTIFMSSNGVQGIINGFNVSYQDVF 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R+ RLIS + +V L++ + + Y+ + +L +
Sbjct: 150 IKRNNNKQRLISLILTIFFTVFLILQLTLLYYTGIIWKYLAE-TKFFFDLSKSSRLINMT 208
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ F+ + ++ + P + K S ++PG + + + ++ F Y+ F+ +Y
Sbjct: 209 SVIMFYFLSMCMLYHYGPNNQDKSKSTVVPGAVLSTLLFITTLFGFNVYLKHFNNLDLLY 268
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
L +M ++F+Y+ + ++G ELN S+
Sbjct: 269 GSLGLVMLVMIFVYVNVIILLVGYELNMSL 298
>gi|29827757|ref|NP_822391.1| ribonuclease BN family membrane protein [Streptomyces avermitilis
MA-4680]
gi|29604858|dbj|BAC68926.1| putative membrane protein, ribonuclease BN-like family
[Streptomyces avermitilis MA-4680]
Length = 339
Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 99/265 (37%), Gaps = 3/265 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ +D A+ ++ A+L++ P ++ +L G + + +I V P
Sbjct: 63 LRRTPVSMWRDDVSDWAAALTYYAILALLPAMLMAVSLIGLVS-PRVTDDLIAHVTAWAP 121
Query: 72 EVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + L ++A + +S+ + R +L+ + + + R
Sbjct: 122 AESGNTLHGSLRHLAGERSAALTVAIGGGVSALWSASSYLAVFRRALHAQHGIEDTRPAL 181
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
T + L + + + V L + + G R A + +
Sbjct: 182 RTAPRILLTAVTLLALLFVSALLLVLSGSLLEALGRRAGLGGAGAAAWTLLRWPALLALV 241
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++ + P ++ LPG + + W+ + FT Y YS +Y LA ++
Sbjct: 242 ALLVLVLFRTGPREVRELRHALPGGMLAALLWLTASAGFTAYASGLGAYSKLYGSLAGVI 301
Query: 250 TCLVFLYMLGVFFILGAELNASMII 274
LV+L++ + + GA+ A +
Sbjct: 302 VFLVWLWVSNLALLAGAQFTAELTR 326
>gi|182440418|ref|YP_001828137.1| hypothetical protein SGR_6625 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326781087|ref|ZP_08240352.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
gi|178468934|dbj|BAG23454.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326661420|gb|EGE46266.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
Length = 309
Score = 131 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 35/265 (13%), Positives = 96/265 (36%), Gaps = 3/265 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ +D A+ ++ A+L++ P ++ ++ G L +I + P
Sbjct: 25 LRRTPVSLWNDDITDWAAALTYYAILALLPALLVTVSVIG-LANPDATGALIADITAFAP 83
Query: 72 EVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + +++A + + + + R +++ + V + R
Sbjct: 84 AESGDALRRPLEAATEQRSAVWLLVATGSVSAVWSACSYLAVFRRAMHAMHGVRDTRPPL 143
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I + + L+ +F V ++ + + + +L +
Sbjct: 144 RQAHIIVVSAIGLLLLLMTSAFAIVMTGPLARWLGRRVGLPHEGETLWAALKWPLLVLLV 203
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ + P + + LPG + W+ + LF Y +YS +Y LA ++
Sbjct: 204 ACLIMVLFSTGPRSARGVRRGLPGGVLAAFCWLTASALFALYATQVGSYSRLYGSLAGLV 263
Query: 250 TCLVFLYMLGVFFILGAELNASMII 274
L++++ + + GA+ N +
Sbjct: 264 VFLIWVWFANLSLLAGAQFNVELRR 288
>gi|299138188|ref|ZP_07031368.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
gi|298600118|gb|EFI56276.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
Length = 330
Score = 131 bits (331), Expect = 9e-29, Method: Composition-based stats.
Identities = 48/292 (16%), Positives = 110/292 (37%), Gaps = 21/292 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG-A 69
++ +E D +A + SA++++FP ++ A + L + + + F
Sbjct: 30 LLRATFAASIEHDVLTLAQATAYSAMVTLFPGLIVAAAIVTLLPDTMPLRFQMALFFDRV 89
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVV-EMRS 127
P ++ + + +L + ++N + L RA+ + S
Sbjct: 90 LPSNVSPLLDAYFATTQKNQQTAQALLGSLLVSITGAANVMVTLMEGFRRAHNLPLPKAS 149
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII--WNGRIYAT 185
++ R+ + V L+ V + S + V L ++ P ++L+ I + R
Sbjct: 150 FWPRRIRALVLVPLSLVPMAAASALVVFGHLITHWLAGELPPGEHVLVYILAFTLRWAIA 209
Query: 186 MLALFIGLIFVHLFLPAAKSK----------------IMSILPGVIFTWISWVVGAVLFT 229
+ + ++ + LPG + + W V ++F
Sbjct: 210 LAGSVGIIAVIYHLGTDVSRHMRQHVEYWLALRMDWSWRASLPGAMVATLLWFVSTLIFG 269
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y+ F+ YS +Y L + + + +LY++ + + GAE NA ++ + P
Sbjct: 270 LYVTRFANYSRVYGSLGAAIALMFWLYIIALCVLAGAEFNAQLVAHRRNSDP 321
>gi|318080612|ref|ZP_07987944.1| integral membrane protein [Streptomyces sp. SA3_actF]
Length = 317
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 105/271 (38%), Gaps = 13/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVI 63
++ D + +E +A+ + LLSV P ++ L G++ F +
Sbjct: 2 LVKDTVNSCMEYRILGLAAEAAFFTLLSVPPLLLCLVGLLGYVDAWTGADTIAGFEQHFL 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D + I + I + + + +I + A + S V ++ Y +
Sbjct: 62 DASRAVLSDQGVHDIAEPIFEDVTRGRPDVISIGFVFALWSGSRAVNVFIDTITVMYGLD 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+R TRL+SFG ++ + + + VA P V P G + I++
Sbjct: 122 GVRGIVATRLLSFGLFIVGLLVCSVALPLMVAGP---DTVVHLLPWSGLAVQILY---WP 175
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + L ++ +S + +PG W V + Y+ + T+Y
Sbjct: 176 VVIILCVVFLTTLYHVSVPVRSPWIEDVPGSFVALAMWFVCSFALRIYLTSTIEGPTIYG 235
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA+ + L+++ + ++GA +NA++
Sbjct: 236 SLAAPVAVLLWIGVSAFAVLVGAAMNAAIDR 266
>gi|328885970|emb|CCA59209.1| putative integral membrane protein [Streptomyces venezuelae ATCC
10712]
Length = 374
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 46/277 (16%), Positives = 107/277 (38%), Gaps = 14/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+V+ ++ D + +E +A+ + LLS+ P ++ + G+ TV +
Sbjct: 33 KMVWLLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGLIAVLGYADDWTNTDTVASI 92
Query: 66 VFGAWPE--------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + + + L ++ A + S V ++
Sbjct: 93 RENILHAAGTVLSDRGVREIAEPLLDDITQGKRPDLISLGFAIALWSGSRAVNVFIDTIT 152
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + R TRL++ ++A + I+ + V P V + P ++ ++
Sbjct: 153 VMYGLDGHRGIVKTRLLALLLYIVALLIGAIVLPLAVVGP---DRVVELVPWGTEVVSVL 209
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ A +L L ++ +S + +PG + WV+G+ L Y+ +
Sbjct: 210 Y---WPAVILLSIAFLTTLYHVSVPVRSPWIEDIPGALVALGMWVLGSFLLRIYLTSQVE 266
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 267 GPTIYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 303
>gi|329940264|ref|ZP_08289546.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329301090|gb|EGG44986.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 382
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 110/274 (40%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPT 61
+ ++ D + +E +A+ + LLSV P ++ L G++
Sbjct: 32 WLLLKDTVNSCMEYRILGLAAEAAFFTLLSVPPLLLSLIGLLGYVDEWTGTDTISSLEDN 91
Query: 62 VIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ + + + + V+ + +I L A + S V ++ Y
Sbjct: 92 ILEASRTVLSDKGVTEIAQPLLHDVMKGGGPDIISIGFLFALWSGSRAVNVFIDTITVMY 151
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++FG ++A + ++ + VA P A+ V + ++
Sbjct: 152 GLDGTRGIVKTRLLAFGLFVVALLIGSVVLPLTVAGPDAVVNVLPWS------TTVVQAL 205
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ + L ++ +S + +PG + WV+G+ L Y+ + T
Sbjct: 206 YWPVVVVGSIVFLTTLYQVSVPVRSPWLEDVPGALVALAMWVLGSFLLRIYLTSTVEGPT 265
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 266 IYGSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 299
>gi|291566221|dbj|BAI88493.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 418
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 121/306 (39%), Gaps = 29/306 (9%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTV 62
+ + + + V++ + +++ ++ + L++ P ++ G + +
Sbjct: 107 FTYLNWQTFHSLGVRTVQQRLYGLSAEMAYHSTLALVPALLALLAAIGSNESLQSTLLEM 166
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ PE + K I + Q + LF+ S + + + S + + +LNR ++V
Sbjct: 167 ANLLGEVVPEQVQKLIGATMSQSGRSLSPRLFSFSFIISIWLFSGVISSAMEALNRIHQV 226
Query: 123 VEM--RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL---------- 170
+ R ++ ++LI+ L + L++ + + + L
Sbjct: 227 PQEKIRPFWKSKLIAIALTLGTLLLLIMALGAVFISDFLVEIIARKSCILETVGNCPLDK 286
Query: 171 ----------------GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
LL + T+ + F++ + P+ + ++PG
Sbjct: 287 IDMCLAQEPVQDCLLQSTLLDTWNRLQWPITLGIVSTNFAFIYRYGPSYRKPKTPLIPGS 346
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
I I W + + LF Y+ Y+ +Y + + + L++L + + ++GA+LNA++
Sbjct: 347 ILAAIFWALISNLFRWYVYQSEYYNLIYGAIGTFIVLLLWLNISSLVVLMGAQLNATVGD 406
Query: 275 YYWRKK 280
R+K
Sbjct: 407 EIRRRK 412
>gi|104773673|ref|YP_618653.1| hypothetical protein Ldb0557 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513669|ref|YP_812575.1| ribonuclease BN-like family protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|103422754|emb|CAI97387.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116092984|gb|ABJ58137.1| Ribonuclease BN-like family enzyme [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
Length = 304
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 110/276 (39%), Gaps = 9/276 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V + + + + + I+ L S+FP ++ N + + D +
Sbjct: 12 VRRFLTTLSSVVSQGEIFQSSIVIAYYILFSIFPIVIIVGNALPWFHLD--TGPIADYLE 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-- 125
+P +A+ I + +L + + A+ A + S V A+RI +NR Y V
Sbjct: 70 MIFPSDVARYIIPIVDTLLKSNSTSYISFGAIMALWSMSCMVNAVRIGMNRLYGVHNKEL 129
Query: 126 ----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R ++ + L ++++ + V L ++ +F + + + R
Sbjct: 130 KLGFWHFIWNRTLTVIFSALMVTMFILLALIVVFGQEVLHFLAPYFNLPLAWIDKLSSYR 189
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + IG+ +++ P K ++ PG I T W + LF+ Y+ F
Sbjct: 190 WLVLLVLILIGVYYLNAVAPNVHFK-KALFPGTIVTVAGWEALSYLFSFYLKNFPVKWEN 248
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L +L + + G +N S+ +
Sbjct: 249 YGIVGNFIIFMLWLNLLAILLLFGTAVNVSLDQLRY 284
>gi|167620300|ref|ZP_02388931.1| YihY family protein [Burkholderia thailandensis Bt4]
Length = 636
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 101/275 (36%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVVTAVMTMMTVESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A I+ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSISSYLFTKSLAFAGSTSTPPIFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 182 TAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAAVAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L+++Y+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWMYLSWFVTLAGAMIASALPAIR 276
>gi|292493155|ref|YP_003528594.1| ribonuclease BN [Nitrosococcus halophilus Nc4]
gi|291581750|gb|ADE16207.1| ribonuclease BN [Nitrosococcus halophilus Nc4]
Length = 456
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 107/267 (40%), Gaps = 2/267 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + Y F E + A+ + + LLS+ P + ++ G H +
Sbjct: 28 QAFLRPKLKLTYVVSREFFEGELTLRATSLVYTTLLSLAPLLAVSFSVLKAFGVHNQMEP 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ + T I V + L +I Y + ++ + + N +R
Sbjct: 88 VLHHFLLPLGPRAEEITTRIIQYVENLKVGALGSIGLGLLFYTVVSLIQKIESAFNHVWR 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + R + VLL LV + A + ++++ ++ +
Sbjct: 148 IKRERPFLR-RFSDYLSVLLIGPVLVFSAVGATASVMQTSFIQTLLEFEVLGKALVAMSK 206
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +L + G F++ FLP K + + L G + W +LF +I T + Y +
Sbjct: 207 LLPYLLVI-GGFTFIYAFLPNTKVRFGNALVGGAVAGVLWETIGLLFAFFITTSTKYDAI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ LA ++ +++LY+ + ++GA++
Sbjct: 266 YSSLAILILFMIWLYISWLILLVGAQV 292
>gi|284052833|ref|ZP_06383043.1| putative ribonuclease BN [Arthrospira platensis str. Paraca]
Length = 422
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 121/306 (39%), Gaps = 29/306 (9%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTV 62
+ + + + V++ + +++ ++ + L++ P ++ G + +
Sbjct: 111 FTYLNWQTFHSLGVRTVQQRLYGLSAEMAYHSTLALVPALLALLAAIGSNESLQSTLLEM 170
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ PE + K I + Q + LF+ S + + + S + + +LNR ++V
Sbjct: 171 ANLLGEVVPEQVQKLIGATMSQSGRSLSPRLFSFSFIISIWLFSGVISSAMEALNRIHQV 230
Query: 123 VEM--RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL---------- 170
+ R ++ ++LI+ L + L++ + + + L
Sbjct: 231 PQEKIRPFWKSKLIAIALTLGTLLLLIMALGAVFISDFLVEIIARKSCILETVGNCPLDK 290
Query: 171 ----------------GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
LL + T+ + F++ + P+ + ++PG
Sbjct: 291 IDMCLAQEPVQDCLLQSTLLDTWNRLQWPITLGIVSTNFAFIYRYGPSYRKPKTPLIPGS 350
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
I I W + + LF Y+ Y+ +Y + + + L++L + + ++GA+LNA++
Sbjct: 351 ILAAIFWALISNLFRWYVYQSEYYNLIYGAIGTFIVLLLWLNISSLVVLMGAQLNATVGD 410
Query: 275 YYWRKK 280
R+K
Sbjct: 411 EIRRRK 416
>gi|114049195|ref|YP_739745.1| ribonuclease BN [Shewanella sp. MR-7]
gi|122944315|sp|Q0HQB7|Y3708_SHESR RecName: Full=UPF0761 membrane protein Shewmr7_3708
gi|113890637|gb|ABI44688.1| tRNA-processing RNAse BN [Shewanella sp. MR-7]
Length = 337
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 112/272 (41%), Gaps = 8/272 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F ++ + + VE+ A H++ LLS+ P + ++ + + I+
Sbjct: 14 FLGIWRFLLHLRQRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIRGQIE 73
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V+ + + I + + +KG + A + + A+ SLN +R
Sbjct: 74 AFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNIWRTK 132
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RS + + Y ++ ++ V++ VA ++ AL ++ +
Sbjct: 133 EKRSVVVAFSM---YWMVITLGPVLVGASLVATSYVVSLKLFEGDALSGVMPLFIER--- 186
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
ML + +++ +P K K L G + + + +G F Y+ F +Y +Y
Sbjct: 187 LPMLFSVAAFLLLYMVVPNQKVKFWHALLGAVVAALLFELGKKGFALYVTKFPSYEAIYG 246
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 247 ALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|257066741|ref|YP_003152997.1| ribonuclease BN [Anaerococcus prevotii DSM 20548]
gi|256798621|gb|ACV29276.1| ribonuclease BN [Anaerococcus prevotii DSM 20548]
Length = 324
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 112/297 (37%), Gaps = 20/297 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + + + I D ++ +S L + P I+ ++ + + +
Sbjct: 1 MNKNKPKTKNFLLNLINRVANHDIMTYSAALSFYLLQASIPLIMVLVSVLSYFISGR--E 58
Query: 61 TVIDVVFGAWPEVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I P + I + I + +++ + + TI+ L A + +++G+ L ++N A
Sbjct: 59 DIIYRFLDFLPNTTIELIAEVIDILLISSQSPTVTTITILFALWSATSGINKLVNAINHA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---- 175
Y + + + RL+S + L+ +V M + + +
Sbjct: 119 YGLHKQKQAIKQRLMSVLFTLIFISLIVFMLIFQIYGTSIINIFNAQIIEKITVHFNTNI 178
Query: 176 ----------IIWNGRIYATMLALFIGLIFVHLFLP---AAKSKIMSILPGVIFTWISWV 222
+ L + I + + + P + + G +F ++
Sbjct: 179 QKALDMISSPLFKLITFVLPFLIMAIAIGVFYRYSPSKANNRISVKEAFCGGLFATVAIF 238
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + ++++++ +S S +Y LA I+ ++L M+ ILGAE A+ Y
Sbjct: 239 IASFIYSYFVNNYSNQSLVYGALAGILALFIWLLMVSTIIILGAECIAAYREGYKED 295
>gi|332977963|gb|EGK14707.1| ribonuclease BN [Psychrobacter sp. 1501(2011)]
Length = 523
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 123/282 (43%), Gaps = 10/282 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F+ + I +F+E+D A+ ++ + LLS+ P + + + A + V
Sbjct: 8 LPFYDKTWFNFLRFLIRNFIEDDSQQKAASLTYTTLLSIVPILTVLLMILSSIPALESVR 67
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
I + P+ + + L A + L I A+A S + + + N+
Sbjct: 68 EQISDLIYSNLLPQSGLQV--SQYLNDFAEKSSNLTAIGAMALFVTSIMTLTTIERAFNQ 125
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV + + ++ + ++ ++ +F+ + +L+++ + G I W
Sbjct: 126 IWRVEDRSGGVKS-ILRYWTIITLGPLVLGTAFIVSSTVQSLSFLNQQIGGYG----IDW 180
Query: 179 NGRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N I A+ I I ++ F+P AK + + +F +++ + F + F++
Sbjct: 181 NFWIQLVSFAITIAGFIGMYWFIPKAKVPLKNAAIAGVFVAVTFELLKYSFGIVMTNFTS 240
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y +Y A++ L+++Y+ +LG E++ ++ I+ ++
Sbjct: 241 YEAIYGAFAALPIFLLWIYLSWNIILLGVEISYTLTIFATKE 282
>gi|148652442|ref|YP_001279535.1| putative ribonuclease BN [Psychrobacter sp. PRwf-1]
gi|288559241|sp|A5WD44|Y630_PSYWF RecName: Full=UPF0761 membrane protein PsycPRwf_0630
gi|148571526|gb|ABQ93585.1| putative ribonuclease BN [Psychrobacter sp. PRwf-1]
Length = 538
Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 117/269 (43%), Gaps = 8/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV-- 66
F+ + I +F+++DG A+ ++ + LLS+ P + + + A + V I +
Sbjct: 16 FNFLRFLIGNFIKDDGQQKAASLTYTTLLSIVPILTVLLMILSSVPALESVREQISNIIY 75
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + +++ I A + L I ALA + + + + N+ +RV +
Sbjct: 76 SNLLPQSGLQ-VSEYINN-FAEKSSNLTAIGALALFVTTIMTLTTIERAFNQIWRVEDRS 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ ++ + ++ ++ +F+ + +L+++ + G +
Sbjct: 134 GGIKS-IVRYWTIITLGPLVLGTAFLVSSAVQSLSFLNQQVAGYGIDWGF---WVQVVSF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
G I ++ F+P AK + + +F +++ + F + F++Y +Y A
Sbjct: 190 AVTIAGFIGMYWFIPKAKVPLKNAAIAGVFVAVTFELLKYSFGIIMSNFTSYEAIYGAFA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
++ L+++Y+ +LG E++ ++ I+
Sbjct: 250 ALPIFLLWIYLSWNLILLGVEISYTLTIF 278
>gi|117918768|ref|YP_867960.1| ribonuclease BN [Shewanella sp. ANA-3]
gi|166199586|sp|A0KRY5|Y311_SHESA RecName: Full=UPF0761 membrane protein Shewana3_0311
gi|117611100|gb|ABK46554.1| tRNA-processing RNAse BN [Shewanella sp. ANA-3]
Length = 337
Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 112/272 (41%), Gaps = 8/272 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F ++ + + VE+ A H++ LLS+ P + ++ + + I+
Sbjct: 14 FLGIWRFLLHLRQRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIRGQIE 73
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V+ + + I + + +KG + A + + A+ SLN +R
Sbjct: 74 AFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNIWRTK 132
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RS + + Y ++ ++ V++ VA ++ AL ++ +
Sbjct: 133 EKRSVVVAFSM---YWMVITLGPVLVGASLVATSYVVSLKLFEGDALSGVMPLFIER--- 186
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
ML + +++ +P K K L G + + + +G F Y+ F +Y +Y
Sbjct: 187 LPMLFSVAAFLLLYMVVPNQKVKFWHALLGAVVAALLFELGKKGFALYVTKFPSYEAIYG 246
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 247 ALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|237746063|ref|ZP_04576543.1| ribonuclease BN transmembrane protein [Oxalobacter formigenes
HOxBLS]
gi|229377414|gb|EEO27505.1| ribonuclease BN transmembrane protein [Oxalobacter formigenes
HOxBLS]
Length = 433
Score = 129 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 111/268 (41%), Gaps = 9/268 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFG 68
I+ E E + +A +IS + +LS+ P + + + ++ G
Sbjct: 29 ILRYCGERLKENNLTDVAGNISFTVILSLVPMLAIVLAVFTTFPEFGTLQDTLETYFAQG 88
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ IA+ I + + + + A + + LA + + + + + + +R + ++ R
Sbjct: 89 MIPDNIARTILNYLGEFASN-AANVSIVGGLALLFTTLSTISTIESAFDRIWHIMNPRPL 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ +LA V L I ++ + L+ + + P L + + A
Sbjct: 148 WKRVILYIAIAVLAPVLLGISIYLTSHLVLSEHGLIGWLPFLNGVSAPLIAIIWTA---- 203
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I ++ LP G +F+ +S+ + LF +IV FS+Y +Y LA+
Sbjct: 204 --IAFTLLYRILPNRLVLWKDAAAGGLFSAVSFEIAIRLFAFFIVNFSSYERIYGALAAF 261
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+++LY+ + +LGA + A +
Sbjct: 262 PIFMMWLYISSLIMLLGAMVAALLPEIR 289
>gi|239983096|ref|ZP_04705620.1| ribonuclease BN-like family integral membrane protein [Streptomyces
albus J1074]
gi|291454928|ref|ZP_06594318.1| integral membrane protein [Streptomyces albus J1074]
gi|291357877|gb|EFE84779.1| integral membrane protein [Streptomyces albus J1074]
Length = 378
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 105/263 (39%), Gaps = 14/263 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVIDVVFGAWPE 72
+E +A+ + LLSV P ++ L G++ +++ +
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLSLVGLLGYVDSWTGADTIASVEQNILEASRAVLSD 60
Query: 73 V-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + V + L +I L A + S V ++ Y + +R T
Sbjct: 61 QGVREIAQPILHDVTKGGSPDLISIGFLLALWSGSRAVNVFIDTITVMYGLDGVRGIVKT 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RL++FG ++A + ++ + V P + P NL+ +++ ++ I
Sbjct: 121 RLLAFGLFVVALLMGSVVLPLMVIGP---DTLVSVVPWGENLIQLLY---WPVILVLSVI 174
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ +S + PG + WV+G+ L Y+ T+Y LA+ +
Sbjct: 175 FLTTLYHVSVPVRSPWIEDTPGALVALGMWVLGSFLLRIYLTNTVEGPTIYGSLAAPVAV 234
Query: 252 LVFLYMLGVFFILGAELNASMII 274
L+++ + ++GA +NA++
Sbjct: 235 LLWIGVSAFAVLVGAAVNAAIDR 257
>gi|302525720|ref|ZP_07278062.1| ribonuclease BN [Streptomyces sp. AA4]
gi|302434615|gb|EFL06431.1| ribonuclease BN [Streptomyces sp. AA4]
Length = 412
Score = 129 bits (325), Expect = 5e-28, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 112/281 (39%), Gaps = 13/281 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDV 65
+ ++ + + + ++ A+ + LS+ P ++ GF+G V V D
Sbjct: 33 WRLLTRTLAKAWDGNIFSEAAEAAFWQTLSLPPLLLGLLGSVGFIGEWFGQNVVTAVHDR 92
Query: 66 VFGAW-----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + I + +L V + ++ + + + S+ + + ++ A+
Sbjct: 93 IITFSHTIFSANAVQEIIEPTVNSILTVGKGEIVSVGFVISLWAGSSAMSSFVDAITVAH 152
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+R+ R+ + L A + LVI + P + +FFP + W G
Sbjct: 153 DQYGVRNEVWQRIFALLLYLCALIGLVIGLPLLAIGP---DLLPEFFPVDWRPTVSSWVG 209
Query: 181 RIYATMLALFIGLIF--VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+Y +L + I L ++ + LPG + + ++V ++ Y+ +
Sbjct: 210 TLYYPVLGVMIALALTTLYKLALPRRLPWHRGLPGAMLAGVVFLVSSIGLRIYLNWITKT 269
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+ ++ +G+ + GA N+++ + K
Sbjct: 270 GYTYGALAAPIAFLLLMFFIGLAVVGGAYFNSAIQELWPAK 310
>gi|302537623|ref|ZP_07289965.1| integral membrane protein [Streptomyces sp. C]
gi|302446518|gb|EFL18334.1| integral membrane protein [Streptomyces sp. C]
Length = 374
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 104/274 (37%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-------GAHQFVPT 61
+ ++ D + +E +A+ + LLS+ P + L G++
Sbjct: 35 WLLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLFLGLLGLLGYVDGWTNTQSVASIEEN 94
Query: 62 VIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ V + + + V + L ++ A + S V ++ Y
Sbjct: 95 ILRAVGTVLSDRGVNDIARPMLDDVTSRGRPDLISLGFAFALWSGSRAVNVFIDTITVMY 154
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A + I+ + V P V + P ++ +++
Sbjct: 155 GLDGHRGIVKTRLLAFLLYVIALLIGAIVLPLMVVGP---DAVVRLVPWSTEVIAVLY-- 209
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L L ++ +S + +PG + WV+G+ L Y+ T
Sbjct: 210 -WPVVTLLSIAFLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRIYLTNTVEGPT 268
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 269 IYGSLAAPVAILLWIGISAFAVLVGAAVNAAIDR 302
>gi|113968660|ref|YP_732453.1| ribonuclease BN [Shewanella sp. MR-4]
gi|123325453|sp|Q0HNH1|Y316_SHESM RecName: Full=UPF0761 membrane protein Shewmr4_0316
gi|113883344|gb|ABI37396.1| tRNA-processing RNAse BN [Shewanella sp. MR-4]
Length = 337
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 52/272 (19%), Positives = 111/272 (40%), Gaps = 8/272 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F ++ + + VE+ A H++ LLS+ P + ++ + + I+
Sbjct: 14 FLGIWRFLLHLRQRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIRGQIE 73
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V+ + + I + + +KG + A + + A+ SLN +R
Sbjct: 74 AFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNIWRTK 132
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RS + + Y ++ ++ V++ VA ++ AL ++ +
Sbjct: 133 EKRSVVVAFSM---YWMVITLGPVLVGASLVATSYVVSLKLFEGDALSGVMPLFIER--- 186
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + +++ +P K K L G + + + +G F Y+ F +Y +Y
Sbjct: 187 LPLFFSVAAFLLLYMVVPNQKVKFWHALLGAVVAALLFELGKKGFALYVTKFPSYEAIYG 246
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 247 ALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|325125320|gb|ADY84650.1| Predicted membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 304
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 108/264 (40%), Gaps = 9/264 (3%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
+ + + + I+ L S+FP ++ N + + D + +P +A+ I
Sbjct: 24 SQGEIFQSSIVIAYYILFSIFPIVIIVGNALPWFHLD--TGPIADYLEMIFPSDVARYII 81
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM------RSWYITRL 133
+ +L + + A+ A + S V A+RI +NR Y V + R
Sbjct: 82 PIVDTLLKSNSTSYISFGAIMALWSMSCMVNAVRIGMNRLYGVHNKELKLGFWHFIWNRT 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ + L ++++ + V L ++ +F + + + R ++ + IG+
Sbjct: 142 LTVIFSALMVTMFILLALIVVFGQEVLHFLAPYFNLPLAWIDKLSSYRWLVLLVLILIGV 201
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ P K ++ PG I T W + LF+ Y+ F Y + + + ++
Sbjct: 202 YYLNAVAPNVHFK-KALFPGTIVTVAGWEALSYLFSFYLKKFPVKWENYGIVGNFIIFML 260
Query: 254 FLYMLGVFFILGAELNASMIIYYW 277
+L +L + + G +N S+ +
Sbjct: 261 WLNLLAILLLFGTAVNVSLDQLRY 284
>gi|282932763|ref|ZP_06338169.1| putative ribonuclease [Lactobacillus jensenii 208-1]
gi|297206340|ref|ZP_06923735.1| possible ribonuclease BN [Lactobacillus jensenii JV-V16]
gi|281303119|gb|EFA95315.1| putative ribonuclease [Lactobacillus jensenii 208-1]
gi|297149466|gb|EFH29764.1| possible ribonuclease BN [Lactobacillus jensenii JV-V16]
Length = 286
Score = 129 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 8/266 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ + + I+ L S+FP I+ N+ V V + + P +A
Sbjct: 16 KRMSRGEINQGSIVIAYYLLFSMFPIIIIAGNIMPLFHLKPEV--VEEYLIYGLPTKVAD 73
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EMRSWYITRLI 134
I + VL + G + L A + S+ A+RIS+NR Y V E+R + +L+
Sbjct: 74 FIMPIVKSVLQKQSTGYISFGILIALWSFSSLTNAMRISMNRIYGVRQQELRFSFGRKLL 133
Query: 135 SFGYVLL----ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
G V+L + L +++ L V+ F + I+ + + +
Sbjct: 134 ERGVVVLITGLMIILLTVLTIALTFGQEILDSVKAFLGINYLGIESIFTYKWLVLLAVML 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + + + LP K + +I PGV + W + LF Y+ F Y + + +
Sbjct: 194 VVIAYFNFALPNVKKRKRAIWPGVFINLVGWSGLSYLFGLYLSHFKLSFENYGIVGTFII 253
Query: 251 CLVFLYMLGVFFILGAELNASMIIYY 276
+++L + + F+LG +NA++
Sbjct: 254 FMLWLNLSSLLFLLGVCVNATIDELK 279
>gi|319951625|ref|YP_004162892.1| ribonuclease bn [Cellulophaga algicola DSM 14237]
gi|319420285|gb|ADV47394.1| ribonuclease BN [Cellulophaga algicola DSM 14237]
Length = 327
Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 115/279 (41%), Gaps = 14/279 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-------GAHQFVP 60
++++I + ++ AS I+ S +++FP ++F +L FL G F
Sbjct: 35 LYELIELYLSGIIQGALSTRASAIAFSLFMALFPLLIFLLSLLPFLIPYIQINGETNFES 94
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + P + +Q+ GL + + + + + +NGV A+ +Y
Sbjct: 95 DFLAFLESFLPNATGDYFEEIFIQIKDQKRGGLLSSTFVISIFLVANGVNAIFGGFENSY 154
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-------PALGNL 173
V R+++ L + L+ S+ L++ + FV +
Sbjct: 155 HVNLTRNFFRQYLYALFVGLILSILLIVAAISFVYSEFYIVEYASDLVTKTYGTNLEETD 214
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ + +I ++ ++ ++ F A + G T + ++ + LF Y+
Sbjct: 215 IIGVRIAKILFFIILSYLTTAILYYFGTAEGRQARFFSAGATMTTLLFIFTSYLFGVYVE 274
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F+ Y+ +Y L ++ +VF+++ +LG ELNA++
Sbjct: 275 KFARYNELYGALGGLLILMVFIWLNSNILLLGFELNATI 313
>gi|256851526|ref|ZP_05556915.1| methionine aminopeptidase Map [Lactobacillus jensenii 27-2-CHN]
gi|260660949|ref|ZP_05861864.1| methionine aminopeptidase Map [Lactobacillus jensenii 115-3-CHN]
gi|256616588|gb|EEU21776.1| methionine aminopeptidase Map [Lactobacillus jensenii 27-2-CHN]
gi|260548671|gb|EEX24646.1| methionine aminopeptidase Map [Lactobacillus jensenii 115-3-CHN]
Length = 286
Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 8/266 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ + + I+ L S+FP I+ N+ V V + + P +A
Sbjct: 16 KRMSRGEINQGSIVIAYYLLFSMFPIIIIAGNIMPLFHLKPEV--VEEYLIYGLPTKVAD 73
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EMRSWYITRLI 134
I + VL + G + L A + S+ A+RIS+NR Y V E+R + +L+
Sbjct: 74 FIMPIVKSVLQKQSTGYISFGILIALWSFSSLTNAMRISMNRIYGVRQQELRFSFGRKLL 133
Query: 135 SFGYVLL----ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
G V+L + L +++ L V+ F + I+ + + +
Sbjct: 134 ERGVVVLITGLMIILLTVLTIALTFGQEILDSVKAFLGINYLGIESIFTYKWLVLLAVML 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + + + LP K + +I PGV + W + LF Y+ F Y + + +
Sbjct: 194 VVIAYFNFALPNVKKRKRAIWPGVFINLVGWAGLSYLFGLYLSHFKLSFENYGIVGTFII 253
Query: 251 CLVFLYMLGVFFILGAELNASMIIYY 276
+++L + + F+LG +NA++
Sbjct: 254 FMLWLNLSSLLFLLGVCVNATIDELK 279
>gi|255324235|ref|ZP_05365357.1| tRNA-processing ribonuclease BN [Corynebacterium tuberculostearicum
SK141]
gi|255298751|gb|EET78046.1| tRNA-processing ribonuclease BN [Corynebacterium tuberculostearicum
SK141]
Length = 427
Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 111/281 (39%), Gaps = 18/281 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV---IDVVF 67
++ F + A+ ++ L++ P ++ ++A + + + +
Sbjct: 94 VVRRVWVDFFHDALMDRAATMTYFTLMAFAPTVLAAYSIATLIFSSRRAEVHELTSQFIA 153
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + + ++ A+G +S L + + +S V A + N Y VE
Sbjct: 154 DYVPSSMTEQAEKLVGSIIGSTAQGTFALVVSVLISLFAASAYVRAFSRTANTVYGRVEG 213
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV----------RKFFPALGNLLL 175
R T + +G ++ + VI+ F + ++ V + LG + +
Sbjct: 214 RGIIRTWALMWGLTIVLVIGAVIVLFANLLRDTIVSGVIDPLAGKLDMQGTADFLGGIFM 273
Query: 176 IIWNG-RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+WN R T++ + + ++ F P + ++ I G + + VV F Y
Sbjct: 274 PVWNWLRFPLTVVIVLSLIAILYHFSPNVRPARFRWITLGSVVALSTNVVVWGAFALYTQ 333
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
F+ +++Y + IM + +++ ILG +L+A ++
Sbjct: 334 RFAG-ASVYGAFSLIMAVFMAVWLSNTMLILGIKLDAEILR 373
>gi|239991667|ref|ZP_04712331.1| putative integral membrane protein [Streptomyces roseosporus NRRL
11379]
Length = 384
Score = 128 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 106/277 (38%), Gaps = 14/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 10 RMAWHLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGMIGLLGYVDEWTTTTTVASI 69
Query: 66 VFGAWPEV--------IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + V + +I A + S V ++
Sbjct: 70 ERNILSASQTVLSERGVNDFAKPLLADVTTGARPDVISIGFAIALWSGSRAVNVFIDTIT 129
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + R TRL++F ++A + ++ + V P V +F P ++ ++
Sbjct: 130 VMYGLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP---DRVVEFVPWGTEVIAVL 186
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +L L ++ +S + +PG + WV+G+ L Y+
Sbjct: 187 Y---WPLVILLTIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTNTVE 243
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 244 GPTIYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 280
>gi|328880693|emb|CCA53932.1| Ribonuclease BN [Streptomyces venezuelae ATCC 10712]
Length = 323
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 104/270 (38%), Gaps = 6/270 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
E + +++ A+ ++ A+L++ P ++ +L G GA +
Sbjct: 19 ELLGRARSDLRLTAVRLWDDNIADCAAALTYYAVLALVPALLVSVSLVGLAGADA-REHL 77
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAK--GLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P A+ + + + + + P+ L L+A + +S+ + R +L+ +
Sbjct: 78 IRDLTSYLPPQSAQVLREALEGLTSAPSSLWALLVSGVLSALWSASSYLAVFRRALHTMH 137
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R+ + R + LV + VA + G + +
Sbjct: 138 RLPDTRPPLRAAHVLVLTAGALLALLVAGAASLVASGPVARQLAAGAGHSGTAAMAV--L 195
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ + ++ ++ P PG + W+ + LFT Y F TYS
Sbjct: 196 RWPVLLVIVTALILLLYRTGPVQARGARRGFPGGALAALLWLGASALFTVY-TQFGTYSR 254
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+Y LA ++ LV+L+ + + GA+ NA
Sbjct: 255 LYGSLAGVVVFLVWLWFSNLALLTGAQFNA 284
>gi|311740990|ref|ZP_07714815.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303792|gb|EFQ79870.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 427
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 111/281 (39%), Gaps = 18/281 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV---IDVVF 67
++ F + A+ ++ L++ P ++ ++A + + + +
Sbjct: 94 VVRRVWADFFHDALMDRAATMTYFTLMAFAPTVLAAYSIATLIFSSRRAEVHELTSQFIA 153
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + + ++ A+G +S L + + +S V A + N Y VE
Sbjct: 154 DYVPSSMTEQAEKLVGSIIGSTAQGTFALVVSVLISLFAASAYVRAFSRTANTVYGRVEG 213
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV----------RKFFPALGNLLL 175
R T + +G ++ + VI+ F + ++ V + LG + +
Sbjct: 214 RGIIRTWALMWGLTIVLVIGAVIVLFANLLRDTIVSGVIDPLAGKLEMQGTADFLGGIFM 273
Query: 176 IIWNG-RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+WN R T++ + + ++ F P + ++ I G + + VV F Y
Sbjct: 274 PVWNWLRFPLTVVIVLSLIAILYHFSPNVRPARFRWITLGSVVALSTNVVVWGAFALYTQ 333
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
F+ +++Y + IM + +++ ILG +L+A ++
Sbjct: 334 RFAG-ASVYGAFSLIMAVFMAVWLSNTMLILGIKLDAEILR 373
>gi|84496269|ref|ZP_00995123.1| putative integral membrane protein [Janibacter sp. HTCC2649]
gi|84383037|gb|EAP98918.1| putative integral membrane protein [Janibacter sp. HTCC2649]
Length = 381
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 107/271 (39%), Gaps = 14/271 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG---AHQFVPTVIDVV 66
+ + I + +AS ALLS+ P ++ G++G V TV + +
Sbjct: 23 RLTVETIRICLRYRVTGLASEAGFFALLSLPPLVLGLFGGVGYIGRWLGQDTVATVREAI 82
Query: 67 FGAWP-----EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+VI+ + + V L ++ + + + S + L +++ Y
Sbjct: 83 TEYAARFLTDDVISSTLAPTVDDVFTAGRFDLISVGFVLSLWSGSRALNVLVDTVSIMYG 142
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+R TR++SF ++A V +I + + P L V L + +
Sbjct: 143 QSGVRGIVPTRVLSFSLYIVALVVGIITIPLVLIGPTLLGEV------LPDTWDFLTFLY 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + ++ +S +PG + T + WVV + I +++
Sbjct: 197 WPVVSLVVIAAFTSLYHVSTPLRSPWTRDIPGAVLTLLIWVVASFAVRGSIAASLGGTSI 256
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L++ + L++LYML + ++GA LNA +
Sbjct: 257 YGPLSAPIVLLIWLYMLAIAVLIGAALNAGI 287
>gi|114561519|ref|YP_749032.1| ribonuclease BN [Shewanella frigidimarina NCIMB 400]
gi|122300991|sp|Q088X1|Y331_SHEFN RecName: Full=UPF0761 membrane protein Sfri_0331
gi|114332812|gb|ABI70194.1| tRNA-processing RNAse BN [Shewanella frigidimarina NCIMB 400]
Length = 320
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 54/278 (19%), Positives = 122/278 (43%), Gaps = 18/278 (6%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+F ++ + + E+ A H++ LLS+ P + ++ + + I
Sbjct: 13 FFSGIWQFLLHLKQRLAEDQINIRAGHLAYVTLLSLVPMLAVTMSMLSAFPVFKGIRGNI 72
Query: 64 D-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ ++ + + I + +A +KG F + +A + + + A+ +LN +R+
Sbjct: 73 EGFIYNNFIPAAGDTVQVHINEFVANASKGTF-VGIIALVFVAIMLISAIDKALNNIWRI 131
Query: 123 VEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
E RS+ ++ +++ G VL+ + +LV S+V +A + P + L +I
Sbjct: 132 TEKRSYVVSFSMYWMVLTLGPVLIGA-SLVATSYVVSLEVVAGTELSGLVPWIVERLPLI 190
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
++ ++ +++ +P K + L G I + + G F Y+ F +
Sbjct: 191 FSA----------ASILLLYMVVPNKKVHFLHALLGAIVAAVLFEAGKKGFAFYVTQFPS 240
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y +Y LA + V++Y+ + +LGAE+ A++ Y
Sbjct: 241 YEAIYGALAVVPILFVWVYLSWMIVLLGAEITAALPEY 278
>gi|288559254|sp|A4VNB9|Y2825_PSEU5 RecName: Full=UPF0761 membrane protein PST_2825
gi|327481526|gb|AEA84836.1| membrane protein [Pseudomonas stutzeri DSM 4166]
Length = 410
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 106/284 (37%), Gaps = 11/284 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + F+ + F+ + G A+ ++ + L +V P + + + A + V
Sbjct: 1 MHQRIDNTFEFGRFLVRRFMADQGPQSAAALTYTTLFAVVPMMTVTFAMLSAIPAFKGVG 60
Query: 61 TVIDV-VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I +F + I + +L + + L + + + + N
Sbjct: 61 EQIQFYIFNNFIPSTGATIQEYLLAFTSQARQ-LTWFGVGFLMATALMMLLTIEKAFNTI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-IW 178
+RV + R R +S + A ++L + A Y+ G LI +
Sbjct: 120 WRVRQPR-----RGVSSFLLYWAILSL--GPLLLGAGFATSTYIASLSLISGPYALIGVG 172
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+L ++ +P + + L G +FT + + +F Y+ F +Y
Sbjct: 173 TLIKVMPLLLSVAAFTLIYAAVPNTRVPLRHALVGGVFTAVLFEAAKQMFGVYVSYFPSY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM-IIYYWRKKP 281
+Y A++ L+++Y+ + + GAEL + WR++P
Sbjct: 233 QLIYGAFAAVPLFLLWIYLSWMIVLFGAELVCGLSSSQQWRRRP 276
>gi|78223975|ref|YP_385722.1| ribonuclease BN [Geobacter metallireducens GS-15]
gi|78195230|gb|ABB32997.1| tRNA-processing RNAse BN [Geobacter metallireducens GS-15]
Length = 453
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 9/256 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWPEV 73
++ F+++ AS ++ S LLS+ PF + G + P ++D V E
Sbjct: 44 VVKDFLDDQCLIRASALAFSTLLSIVPFFALAFAVLKGFGVQNTLEPFILDQVAAGSHE- 102
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAY-FSSNGVEALRISLNRAYRVVEMRSWYITR 132
I D+I+ + G LAA + + + + N + V E RS Y R
Sbjct: 103 ----IVDKIVAYINNTKVGSLGAIGLAALFVTVVTLLGNVEEAFNAIWGVRETRSLY--R 156
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
S +L S +++ + V + ++ L + L+++I
Sbjct: 157 KFSDYLSVLVSGPILLFAAVSTTTTIESQAFVQWIMGYTYLGDALLALFRLVPYLSIWIA 216
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L+F+++F+P K + S L G I W + H+ V + Y+ +Y LA + +
Sbjct: 217 LVFLYMFIPNTKVRFRSALVGGIIAGTIWQGAQWGYIHFQVGVAKYNAIYGTLAVLPVFM 276
Query: 253 VFLYMLGVFFILGAEL 268
V+LY V +LG E+
Sbjct: 277 VWLYASWVIVLLGGEV 292
>gi|294815735|ref|ZP_06774378.1| Integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294328334|gb|EFG09977.1| Integral membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 407
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 109/277 (39%), Gaps = 14/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------HQF 58
+ + ++ D + +E +A+ + LLS+ P ++ L G++
Sbjct: 31 KMTWLLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLMLGLLGLLGYIDDWTNTTTVASI 90
Query: 59 VPTVIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+++ E + + V L +I A + S V ++
Sbjct: 91 EQNILNAAGTVLSERGVNDVARPLLEDVTHGGRPDLISIGFAIALWSGSRAVNVFIDTIT 150
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + R TRL++F L+A V ++ + V P V ++ P L+ ++
Sbjct: 151 VMYGLDGRRGIVATRLLAFLLYLIALVIGAVVLPLAVVGP---DRVVEWVPWGTTLVTVL 207
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +L L ++ +S + +PG + WV+G+ L Y+V+
Sbjct: 208 Y---WPVVILLSVAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLVSTVE 264
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 265 GPTIYGSLAAPIAVLLWIGISAFAILVGAAVNAAIDR 301
>gi|313884907|ref|ZP_07818659.1| YihY family protein [Eremococcus coleocola ACS-139-V-Col8]
gi|312619598|gb|EFR31035.1| YihY family protein [Eremococcus coleocola ACS-139-V-Col8]
Length = 324
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 98/245 (40%), Gaps = 3/245 (1%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQ 84
+ A+ +S + ++ P ++ AN+ L ++ + P + + +
Sbjct: 25 GSYAAELSFYIIWAIVPLMLALANVISVLPFSPT--DIVATIKDVLPSQVQGLLLPLLED 82
Query: 85 VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV 144
L+ + G F++ + + + +SN ++ N Y+ ++ I R+ S+ + + +
Sbjct: 83 YLSSTSSGAFSLGLIISLWPASNVFNTIQRVFNTIYKAEPRKNALIARMFSYVFTIAFVL 142
Query: 145 TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK 204
V + F + V+ F LL I+ N L + L+ ++ F+P
Sbjct: 143 VGVFLGFAVLYGETFYQAVKDIFGFDFALLEILINQSGLIGFALLALVLLIIYQFIPNVN 202
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+PG +F + + + + LF + ST + + L++LY + +
Sbjct: 203 WTWRYSIPGTLFALLGFTLISQLFGLVVSMMG-RSTSNQTIGVFIILLIWLYFNAMVIAI 261
Query: 265 GAELN 269
GA +N
Sbjct: 262 GAFIN 266
>gi|326775817|ref|ZP_08235082.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
gi|326656150|gb|EGE40996.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
Length = 378
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 105/277 (37%), Gaps = 14/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 10 RMAWHLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGMIGLLGYVDEWTATTTVASI 69
Query: 66 VFGAWPE--------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + V + +I A + S V ++
Sbjct: 70 ERNILSAAQTVLSERGVNDFAKPLLADVTTGARPDIISIGFAIALWSGSRAVNVFIDTIT 129
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + R TRL++F ++A + ++ + V P V + P ++ ++
Sbjct: 130 VMYGLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP---DRVVELVPWGTEVIAVL 186
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ML L ++ +S + +PG + WV+G+ L Y+
Sbjct: 187 Y---WPLVMLLSVAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTNTVE 243
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 244 GPTIYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 280
>gi|170728937|ref|YP_001762963.1| ribonuclease BN [Shewanella woodyi ATCC 51908]
gi|226737458|sp|B1KLY8|Y4618_SHEWM RecName: Full=UPF0761 membrane protein Swoo_4618
gi|169814284|gb|ACA88868.1| ribonuclease BN [Shewanella woodyi ATCC 51908]
Length = 336
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 110/274 (40%), Gaps = 8/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVV 66
++ + + E+ A H++ +LLS+ P + ++ Q + I D +
Sbjct: 17 IWHFMIHLKQRLAEDQINIRAGHLAYVSLLSLVPMVAVTMSMLSAFPVFQGIRGQIEDFI 76
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + + I + + +KG + A + + ++ SLN + E R
Sbjct: 77 YNNFIPSAGDSVQVYINEFVDNASKG-TAVGIAALMVVAIMLISSIDKSLNSIWHTKEKR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S I+ + + VL L+ S V + ++L +L ++ M
Sbjct: 136 SMVISFSM-YWMVLTLGPVLMGASLVATSYVVSLKVFNG-----SDLSGVVPLLVERLPM 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + +++ +P K K L G I + + G F Y+ F TY +Y LA
Sbjct: 190 LFSVATFLLIYMVVPNTKVKFFHALLGAIVAALMFEFGKKGFALYLTKFPTYEAIYGALA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+I +++Y+ + +LGA + A+M Y +K+
Sbjct: 250 TIPILFLWVYLSWMIVLLGAVITAAMPEYLDKKQ 283
>gi|182435180|ref|YP_001822899.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178463696|dbj|BAG18216.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 371
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 104/274 (37%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 3 WHLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGMIGLLGYVDEWTATTTVASIERN 62
Query: 69 AWPE--------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + V + +I A + S V ++ Y
Sbjct: 63 ILSAAQTVLSERGVNDFAKPLLADVTTGARPDIISIGFAIALWSGSRAVNVFIDTITVMY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A + ++ + V P V + P ++ +++
Sbjct: 123 GLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP---DRVVELVPWGTEVIAVLY-- 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
ML L ++ +S + +PG + WV+G+ L Y+ T
Sbjct: 178 -WPLVMLLSVAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTNTVEGPT 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 237 IYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 270
>gi|288559253|sp|A8FPZ2|Y302_SHESH RecName: Full=UPF0761 membrane protein Ssed_0302
Length = 318
Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/281 (17%), Positives = 113/281 (40%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + + + + E+ A H++ LLS+ P + ++ +
Sbjct: 10 LHTFVLSTWHFMIHLKQRLAEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFSGIR 69
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I+ ++ + + I + ++ +KG + A + + A+ +LN
Sbjct: 70 GQIEGFIYNNFLPAAGDTVQVYINEFVSNASKG-TAVGIAALMVVAIMLISAIDKALNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS ++ + Y ++ ++ V+M VA ++ L ++ ++
Sbjct: 129 WRTTEKRSMVVSFSM---YWMVLTLGPVLMGASLVATSYVVSLKVFNGSDLSGVVPVLVE 185
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
M + +++ +P K K L G I + + G F Y+ F TY
Sbjct: 186 R---LPMFFSVATFLLIYMVVPNIKVKFFHALLGAIVAALLFEFGKKGFAIYLTKFPTYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA+I +++Y+ + +LGAE+ A+M Y +++
Sbjct: 243 AIYGALATIPILFMWVYLSWIIVLLGAEITAAMPEYLDKRQ 283
>gi|298506496|gb|ADI85219.1| membrane-bound transcriptional regulator, ribonuclease BN-related
[Geobacter sulfurreducens KN400]
Length = 438
Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 98/254 (38%), Gaps = 5/254 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A+ +F+++ AS ++ S LLS+ PF + LG + +
Sbjct: 41 AVGNFMDDQCLLHASALTYSTLLSIVPFFALAFAVLKGLGVQNTLEP---FILDQVAAGS 97
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + + + L + + + + + + N + V E RS Y R
Sbjct: 98 HEIVDRIVTYINNTKVGSLGAVGLVTLVVSTVTLLGNIEETFNSIWGVRETRSLY--RRF 155
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
S ++ ++I + + V L ++ L ++ +++++ L+
Sbjct: 156 SDYLSVVVFGPILIFAAISVTTTLESQKAVQWLIGTAYLGDVLVAAFRLVPYISIWLALV 215
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F+++ +P K + S L G + W + H+ V + Y+ +Y LA + +++
Sbjct: 216 FLYMLIPNTKVRFRSALVGGVIAGTLWQAAQWGYIHFQVGVAKYNAIYGTLAVLPVFMIW 275
Query: 255 LYMLGVFFILGAEL 268
LY + G E+
Sbjct: 276 LYASWSIVLFGVEV 289
>gi|167622301|ref|YP_001672595.1| ribonuclease BN [Shewanella halifaxensis HAW-EB4]
gi|167352323|gb|ABZ74936.1| putative ribonuclease BN [Shewanella halifaxensis HAW-EB4]
Length = 326
Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 112/279 (40%), Gaps = 16/279 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + ++ + F E+ A H++ LLS+ P + ++ +
Sbjct: 6 RSFLLSIWAFFLHLLSRFKEDQVNIKAGHLAYVTLLSLVPIVAVMFSMLSAFPVFSGIRE 65
Query: 62 VID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ V+ + + I + +A +KG ++ A + + A+ +LN +
Sbjct: 66 KLEAFVYNNFLPAAGDTVQIYINEFVANASKG-TSVGIAALVVVALMLISAIDKALNSIW 124
Query: 121 RVVEMR----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
R E R S+ + ++ +L +LV S++ + + P L L
Sbjct: 125 RTKEKRQAAVSFSMYWMVLTLGPVLVGASLVATSYIVSLKVFNTSELSGVVPILIERL-- 182
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
ML + +++ +P K K + L G + + + +G F +Y+ F
Sbjct: 183 --------PMLFSVAAFLLLYMVVPIKKVKFLHALLGALVAAMLFELGKKGFAYYVTQFP 234
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y +Y LA+I V++Y+ V ++GAE+ A + Y
Sbjct: 235 SYEAIYGALATIPILFVWVYVSWVIVLVGAEITAGLPEY 273
>gi|213965745|ref|ZP_03393938.1| tRNA-processing ribonuclease BN [Corynebacterium amycolatum SK46]
gi|213951696|gb|EEB63085.1| tRNA-processing ribonuclease BN [Corynebacterium amycolatum SK46]
Length = 365
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 107/283 (37%), Gaps = 18/283 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F E G+ A+ ++ +L+ P ++ ++A + A D +
Sbjct: 40 LKRAGIEFFLELGFDAAAKLTYYTVLTFAPALLAIYSIATLMLAGYTEDLNRLTEDFIRS 99
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P A+PI + I ++ GL TI + A SS A + N Y V E R
Sbjct: 100 YIPAEYAEPIRNVISTIIGSATGGLVALTIGIVLALISSSAYTRAFSRTGNSIYGVSEGR 159
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP----------ALGNLLLI 176
+ L+ LL + V++ + + + + + + +
Sbjct: 160 TLIRYHLLMVAITLLLLIGTVVLLIAIIVNDQLVNTIVEPVARPLGIESTTRQVIDFCIS 219
Query: 177 IWNGRIYATMLALFIGLI-FVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+W+ + ++ + + LI ++ F P + K + G IS +V Y+
Sbjct: 220 VWSWLRWPVIIVMSMILIGSLYYFTPNVRMRKFRWLSTGSALAIISSLVIGKALQLYLFN 279
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ + Y + +++ + L+ + V + G +L+A +
Sbjct: 280 FAASNP-YGAMGAVIALMTALWGINVVVVFGFKLDAEIERMRQ 321
>gi|271967030|ref|YP_003341226.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270510205|gb|ACZ88483.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length = 379
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 87/271 (32%), Gaps = 5/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ +I D+ F DG + ++ LS+ P + L+ L Q + +
Sbjct: 33 WHLIRDSFARFRYGDGMTNSRALAFQICLSIIPGAIALVGLSSVLNQEQLGQVLELTLSR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG----LFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + + D + + A + ++ + + NR Y V
Sbjct: 93 IAPGAGVEAVKDVLADSHRQAGHTGGTLALWLGLATALFSLTSAMAQVERGANRIYGVER 152
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ + + A + + V V + K + ++ R
Sbjct: 153 DRPFHRKYGKALLMAVTAGAFMTVGFVVMVGGGAIGRALAKVYGWNDGMMDAFTLVRWPV 212
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L + + P + + L G + + + W V +L Y T+ Y
Sbjct: 213 GFLLALLSASVLFRAAPRRRQPGHTWLAFGALVSLVLWTVFTLLLALYTERSGTFGATYG 272
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
L ++M L++ ++ + LG A +
Sbjct: 273 PLTAVMALLLWSFLSSMALFLGLAFAAQLEA 303
>gi|322368243|ref|ZP_08042812.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
gi|320552259|gb|EFW93904.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
Length = 417
Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 107/269 (39%), Gaps = 15/269 (5%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ I++ E++ +A+ I+ A +S+ P ++ +A F+G F TV+ V
Sbjct: 17 RETIDYAREQEITFLAAGIAYYAFVSILPALLLALAIASFVGGDAFANTVVGTVQSLLSP 76
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ D + + + + +L + + L + +R Y V + T
Sbjct: 77 KAKSIVQDSLSSASGRRSATV--VGSLVLVWSTLRVFRGLDEAFSRVYDVNVTEPFIDTM 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + + ++ + ++ V + +P + + A + L
Sbjct: 135 TDAAVVLAVIALGVAGVAVVNILLPSL------------SWVPFRRTIVSVALLFGLIPV 182
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ F P + +LPG +F + W +F Y+ + + +S Y L + +
Sbjct: 183 FLPLYYFFPDTDVTVREVLPGTLFATLGWTALQAIFGVYVDSAAQFSA-YGVLGGALLVV 241
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKKP 281
+LY+ G+ + GA +NA + ++RK
Sbjct: 242 TWLYLGGIVLLFGAVINAVLAGRHFRKTK 270
>gi|13488528|ref|NP_109535.1| BrkB (serum resistance)-like protein [Mesorhizobium loti
MAFF303099]
gi|14028282|dbj|BAB54874.1| BrkB (serum resistance) homolog [Mesorhizobium loti MAFF303099]
Length = 384
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 53/287 (18%), Positives = 112/287 (39%), Gaps = 10/287 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
M F V+++ +A+ FV++D + + ++ A S+ P ++ +AG G
Sbjct: 45 MPLAFKDVWNVAREAVVGFVDDDALSHGAAMAFYATTSLAPVLLIVVAIAGLAFGHDAAQ 104
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNR 118
+ + G A + D + A + + I + +++GV ++ SLN+
Sbjct: 105 LALSAQISGLMGAGSAGILEDILKGASAKSSGTVAAILGTVTLFITASGVFGEMQQSLNK 164
Query: 119 AYRVVEMRS----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
++V R +S G V L++ AI ++ P +L
Sbjct: 165 IWKVEPNGGSISRLVRARAVSLGLVAALGFMLLVSLVASAAISTLGDFISARLPFGTIVL 224
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+I + + + + ++ LP K + G + T + +G L Y+ T
Sbjct: 225 SVINT---FVSFVLISAMFAAIYKVLPDRTLKWRDVAIGALVTAALFTIGKSLIGWYLGT 281
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S ++ Y ++ L+++Y F+LGAE + I + +
Sbjct: 282 -SAVASSYGAAGGLLVILLWVYYSSEIFLLGAEFTRAFSIRHGSRSD 327
>gi|304411738|ref|ZP_07393350.1| ribonuclease BN [Shewanella baltica OS183]
gi|307306210|ref|ZP_07585955.1| ribonuclease BN [Shewanella baltica BA175]
gi|304349926|gb|EFM14332.1| ribonuclease BN [Shewanella baltica OS183]
gi|306911083|gb|EFN41510.1| ribonuclease BN [Shewanella baltica BA175]
Length = 326
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 57/276 (20%), Positives = 113/276 (40%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWHFLLHLRRRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEGFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + Y ++ ++ V++ VA ++ A+ +L I
Sbjct: 129 WRTKEKRSVVVAFSM---YWMVLTLGPVLVGASLVASSYVISLKVFEAEAISGMLPIFIA 185
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G I + + +G F Y+ F +Y
Sbjct: 186 R---LPMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFELGKKAFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALAVIPIIFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|159900436|ref|YP_001546683.1| putative ribonuclease BN [Herpetosiphon aurantiacus ATCC 23779]
gi|159893475|gb|ABX06555.1| putative ribonuclease BN [Herpetosiphon aurantiacus ATCC 23779]
Length = 360
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 103/268 (38%), Gaps = 13/268 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVV 66
+ ++ + + ++ + + ++ + S+ P ++ ++AG + + V +
Sbjct: 5 IINLFKQTFKEWGDDKVPRLGAALAYYTVFSLAPLLIIAISIAGLVFDQEAARGEVTRQL 64
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRV--V 123
+ A+ I + I Q + + T+ +A F ++GV L+ ++N + V
Sbjct: 65 ATLINDDAAQAINEIIQQSSNQRSGIIGTLIGVATLLFGASGVFGQLKDAMNTIWGVQPK 124
Query: 124 EMRSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + R SF VL L++ + + ++ + ++
Sbjct: 125 PRRGIWGIVQERFFSFTMVLGVGFLLLVSLIISTLLEAGKNWLFG-----AEIGIVFQII 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + + + FLP K + G T + + +G Y+ T S+ ++
Sbjct: 180 NLIVSFGIITVVFALLFKFLPDVKMAWRDVWIGAALTALLFTIGKFAIGQYLST-SSTAS 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ S++ L+++Y GAEL
Sbjct: 239 TFGAAGSLIIVLLWVYYSSQILFFGAEL 266
>gi|227486426|ref|ZP_03916742.1| ribonuclease [Anaerococcus lactolyticus ATCC 51172]
gi|227235607|gb|EEI85622.1| ribonuclease [Anaerococcus lactolyticus ATCC 51172]
Length = 325
Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats.
Identities = 55/297 (18%), Positives = 115/297 (38%), Gaps = 20/297 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ D I + I +D AS +S L + P ++ ++A
Sbjct: 1 MKIKKHKFKDFIKNFINRLKTQDIMTYASALSFYFLQASIPLMMVLVSVASTFLKGN--E 58
Query: 61 TVIDVVFGAWPEVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I +P+ A+ I + + + + + T++ L A + +++GV+ L +++N A
Sbjct: 59 KIIYEFLNLFPKTTARLIIKALDIMFASSQSTAVTTVTILFALWSATSGVDKLIMAINHA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---- 175
Y + RL+S Y ++ ++ + + P + + +
Sbjct: 119 YGLGHQAKAIKQRLMSIIYTIIFIAFIMFLLIFQIYGPTIINILDSKILTITGKFFGDNL 178
Query: 176 ----------IIWNGRIYATMLALFIGLIFVHLFLP---AAKSKIMSILPGVIFTWISWV 222
I I +L + L ++ + P A + L G I +
Sbjct: 179 ESIIDFISSPIFTILTIAIPLLIMSAALGILYKYAPGNSANRIPFKQALTGGILATGTIY 238
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
V + ++++I FS S +Y LA I+ ++L ++ I+GAEL A+ Y +
Sbjct: 239 VASFAYSYFINNFSNKSLIYGALAGILALFIWLLIVSSLLIIGAELIAAFREGYRDE 295
>gi|322385717|ref|ZP_08059361.1| ribonuclease BN [Streptococcus cristatus ATCC 51100]
gi|321270455|gb|EFX53371.1| ribonuclease BN [Streptococcus cristatus ATCC 51100]
Length = 306
Score = 125 bits (315), Expect = 7e-27, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 109/270 (40%), Gaps = 5/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + + + ++ L+S+FP ++ AN+ + ++ +
Sbjct: 12 EFLRAFFHFYQASEADITSIAVAYYFLISIFPLLLIAANILPYFQIRP--DELLVALKDL 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + I + VL P+ GL +IS L+A + S + L+ + N+ Y + R
Sbjct: 70 LPESLYLTIAKVVRDVLTKPSTGLLSISILSALWTFSQSMTFLQKAFNKCYGTKQGRGLI 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ +F L V L + + + + + + F+ L + L L
Sbjct: 130 WERIFAFIMSLGLQVLLGLSLVLTLFGRMLVGILYDFWHFDRGLYQQLLTMTEPTIYLML 189
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY--STMYAGLA 246
F+ LI ++ LP K KI +LPG + LFT YI + + G
Sbjct: 190 FLSLILLYFSLPNVKIPKIRYVLPGATLVLVIIYSLMNLFTVYIEAYLDRFLDVRFVGSV 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ + + ++ I+GA LNAS+ +
Sbjct: 250 VVVIIMFWFILIAKVLIVGAVLNASIQSRF 279
>gi|258653906|ref|YP_003203062.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
gi|258557131|gb|ACV80073.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
Length = 356
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/282 (19%), Positives = 110/282 (39%), Gaps = 14/282 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--------GAHQFVP 60
+I + + + M+S + LS P ++ L G++ Q
Sbjct: 47 RKVIGRTLSKAWGDSLFGMSSQAAFWCALSTAPLLLALLGLVGYVVGWYFPAGTIDQVRE 106
Query: 61 TVIDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + + E +A + + + +L+ + ++ + + + S+ + A S+ A
Sbjct: 107 QILIFLNAIFNEEVADNLVGNTVETILSQGQADVVSVGLVISLWAGSSAMSAFVESITIA 166
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLII 177
Y E+R R + G LLA ++ +IM + P Y+ K FP + I+
Sbjct: 167 YGQHEVRHPVAERFFALGLYLLALLSGIIMLPLLAIGP---DYLPKVFPESWRPQVSNIV 223
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
L L L ++ P K +PG ++V + Y+
Sbjct: 224 NIAYYPTLALGLIFLLTVLYKVAPKHKHPWYRGVPGAFLAAAVFIVTSFGLRLYLSYVYA 283
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y LA+ +T L+F Y + + I+GA+ N + + YY +
Sbjct: 284 HGLTYGALATPITFLLFYYFVSMAVIIGAQFNNATLEYYPPR 325
>gi|238854937|ref|ZP_04645267.1| YihY family protein [Lactobacillus jensenii 269-3]
gi|260664223|ref|ZP_05865076.1| methionine aminopeptidase Map [Lactobacillus jensenii SJ-7A-US]
gi|282931649|ref|ZP_06337142.1| putative ribonuclease [Lactobacillus jensenii 208-1]
gi|313472424|ref|ZP_07812916.1| putative YihY family protein [Lactobacillus jensenii 1153]
gi|238832727|gb|EEQ25034.1| YihY family protein [Lactobacillus jensenii 269-3]
gi|239529703|gb|EEQ68704.1| putative YihY family protein [Lactobacillus jensenii 1153]
gi|260562109|gb|EEX28078.1| methionine aminopeptidase Map [Lactobacillus jensenii SJ-7A-US]
gi|281304260|gb|EFA96369.1| putative ribonuclease [Lactobacillus jensenii 208-1]
Length = 286
Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/269 (21%), Positives = 110/269 (40%), Gaps = 8/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + + I+ L S+FP I+ N+ V V + +
Sbjct: 8 RHFFKLLSKRMSRGEINQGSIVIAYYLLFSMFPIIIIAGNIMPLFHLKSGV--VEEYLIY 65
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EMR 126
P +A I + VL + G + L A + S+ A+RIS+NR Y V E+R
Sbjct: 66 GLPAKVADFIMPIVKAVLQKQSTGYISFGVLIALWSFSSLTNAMRISMNRIYGVRQQELR 125
Query: 127 SWYITRLISFGYVLLA----SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ +L+ G V+L V L++++ L V+ F + I+ +
Sbjct: 126 FSFGRKLLERGVVVLITGSMIVLLMLLTIALTFGQEILNSVKAFLGISYLGIESIFTYKW 185
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + + + + + LP + + +I PGV I W + LF Y+ F Y
Sbjct: 186 LVLIVVMLVVIAYFNFALPNVQKRKRAIWPGVFVNLIGWAGLSYLFGLYLSHFKLSFENY 245
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ + + +++L + + F+LG +NA+
Sbjct: 246 GIVGTFIIFMLWLNLSSLLFLLGVCVNAT 274
>gi|311742300|ref|ZP_07716109.1| ribonuclease BN [Aeromicrobium marinum DSM 15272]
gi|311313928|gb|EFQ83836.1| ribonuclease BN [Aeromicrobium marinum DSM 15272]
Length = 295
Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 113/275 (41%), Gaps = 14/275 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTV 62
+ + + +A+ + A+LS+ P I A GF+ F V
Sbjct: 17 QVAAHTVSTCLRHRVTGLAAEAAFFAILSLPPLIFGLAGTIGFVAERYRVAQVEVFKDRV 76
Query: 63 IDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+++ A P + + I + +VL + +I + A + S + ++ Y
Sbjct: 77 LELASQALTPSTVDQVIAPTLDEVLEGGRFDVVSIGFVLALWSGSRALNVFIDTITIMYG 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R TR +SFG +A V +++ + +A P VR P + ++
Sbjct: 137 LGGRRGIVKTRALSFGLYAVALVIGIVLVPLVLAGP---EVVRALVPDEATFMTALY--- 190
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A +L L ++ + + + LPG FT + WV+GA + S +++
Sbjct: 191 WPAVLLMSVGFLASLYHWAVPERKSWAAGLPGAAFTLLMWVLGAYFVRWALGFSSGGTSI 250
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y LA+ + L+ LY+L + ++GA +NA++
Sbjct: 251 YGPLAAPIAVLLLLYVLSISVLIGAAINAAIDELR 285
>gi|289706024|ref|ZP_06502397.1| YihY family protein [Micrococcus luteus SK58]
gi|289557226|gb|EFD50544.1| YihY family protein [Micrococcus luteus SK58]
Length = 365
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 55/285 (19%), Positives = 112/285 (39%), Gaps = 27/285 (9%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGA 69
+ A++ F + G +A+ ++ +LS+ P ++ ++ + A + ++ + G
Sbjct: 38 LTRALKEFGNDGGTDLAAKLTYYLVLSLAPSLLAVFSILSLVLASNRGAIDDLLGQLTGL 97
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL-----AAAYFSSNGVEALRISLNRAYRVVE 124
P +P+ ++ ++ A I AL A + +S V+A S N Y E
Sbjct: 98 VPSD-YQPLVTNLVTTMSESAGSGGGIIALIIGIATALWSASAYVKAFNRSANTVYGYEE 156
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVF-------------VAIPLALAYVRKFFPALG 171
R L + L+ V + ++ +A PL + L
Sbjct: 157 GRGLVKLTLTNLLTTLILIVGIAVVLLSLALNRSLVDGFLQPIAGPLGM---TGVVNFLS 213
Query: 172 NLLLIIWNG-RIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFT 229
+ L +W + +L L + + ++ P K + PG I + V+ AV +
Sbjct: 214 DTFLPVWAWVKWPVVVLILLVLIATLYYTTPNVQKPRFHLFGPGNIVALVGMVLAAVALS 273
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y F+ YS Y + +IM L L++ + +LG E++ +
Sbjct: 274 VYFTQFAGYSA-YGAIGTIMALLFALWIFNIVLLLGLEVDTEVER 317
>gi|330508907|ref|YP_004385335.1| YihY family protein [Methanosaeta concilii GP-6]
gi|328929715|gb|AEB69517.1| YihY family protein [Methanosaeta concilii GP-6]
Length = 347
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/298 (16%), Positives = 113/298 (37%), Gaps = 27/298 (9%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANL-AGFLGAHQFVPTVIDVVF 67
++ E + W A+ I+ +L S+FP ++ L FL + +++ +
Sbjct: 33 LRLLAATFSRMSETESWDAAAAIAYYSLFSLFPMLILLVILGTSFLQTKENYHQLMNFIG 92
Query: 68 GAWPE-------------------VIAKPITDEILQVLAVPAKGLFTISALAA---AYFS 105
G P + P+ D + + + + A + +
Sbjct: 93 GILPPAESLARENIQVIQDLGDKLNMHLPLKDLLQENVNQILHLRLPVGIAAGAGLLWSA 152
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ L +++RA+ E R+ RL+ V + L+I+S V V++ L +
Sbjct: 153 TGVFVILSKNIDRAWSNSEGRNPLEWRLVGIAMVGSLLIGLIILSMVVVSLIGLLDFSLG 212
Query: 166 FFPALGNLLLIIWNGRIYATM---LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
G + + ++ + + +FI ++ + P + G + W
Sbjct: 213 LLLGEGGVYHMPLESKLLYRLFPDVVIFIAFTILYWWAPKVDIRWSDAAFGAFVATLCWE 272
Query: 223 VGAVLFTHYIVT-FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + F Y+ + S + +Y L +++ ++++Y+ G+ + GA L A M+ K
Sbjct: 273 LSKMGFAWYLESGLSNHMLVYGSLGTVVILMLWIYLSGLICLFGAHLVAQMVGRRQAK 330
>gi|319779629|ref|YP_004130542.1| Ribonuclease BN [Taylorella equigenitalis MCE9]
gi|317109653|gb|ADU92399.1| Ribonuclease BN [Taylorella equigenitalis MCE9]
Length = 445
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 11/263 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VV 66
+ + ++E+ +A ++ + +L++ P + +L + + +
Sbjct: 36 RETLLYIYNRVLKENITQVAGTLTYTTVLAIVPLLAVILSLFTAFPMFNTMQGDLQNYMT 95
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I+ I + + Q A A+G+ + ++ S ++ + LN+ +RV + R
Sbjct: 96 SNLMPESISDQIMNYLNQ-FAESARGMTVVGSVFLVITSIMLMKTVDEVLNKMFRVSKQR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ +L+ L + FVF A +YV + +G L + N
Sbjct: 155 PLWVR-------ILIYWAILSVGPFVFATSIWASSYVTRAKLGMGVDLSFVQNLVGTIFP 207
Query: 187 LAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L FI ++ +P + L G + + + F +YI F +Y+ +Y
Sbjct: 208 FILSFISFSLIYKIVPNRQVHWKDALIGGATAALLFEGLKLGFAYYISRFPSYTLIYGTF 267
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
A+I L+++Y+ + + GA L
Sbjct: 268 ATIPLFLLWIYISWIIVLAGALL 290
>gi|254413377|ref|ZP_05027148.1| YihY family protein [Microcoleus chthonoplastes PCC 7420]
gi|196179997|gb|EDX74990.1| YihY family protein [Microcoleus chthonoplastes PCC 7420]
Length = 355
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 110/272 (40%), Gaps = 11/272 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
F +V ++ + I+ + E+ +A+ ++ + S+ P ++ +AG G +
Sbjct: 7 NFKVVGELFKETIQEWQEDKASRLAAALAYYTVFSLAPLLIIAIAIAGSIFGPEAARGEI 66
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
++ + G AK I I + +I ++ F ++GV A L+ +LN +
Sbjct: 67 VEQIQGLVGTEGAKVIETAIQNANRPNVSSIASIISIVVLLFGASGVFAQLQDALNTVWG 126
Query: 122 VVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V + + RL+SF VL L++ V A+ Y +G L +
Sbjct: 127 VQPKPGRPVKGFLQKRLLSFSVVLGIGFLLLVSLIVSAALAALSNYANDLLFGVGFLWSL 186
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ ++ + + ++ FLP K + G T I + +G L Y+
Sbjct: 187 LN---WVLSLGVITLLFAMMYKFLPDVKISWSDVWIGASITAILFTIGKSLIGMYLGR-G 242
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++++ Y S++ L ++Y +GAE
Sbjct: 243 SFASTYGAAGSLVIFLAWVYYSAQILFIGAEF 274
>gi|312864831|ref|ZP_07725062.1| YihY family protein [Streptococcus downei F0415]
gi|311099958|gb|EFQ58171.1| YihY family protein [Streptococcus downei F0415]
Length = 322
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 110/260 (42%), Gaps = 6/260 (2%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
++H+ + + ++ LL++FP IV AN+ +L +P V+ + P I
Sbjct: 17 LKHYRSAEIDLSSIAVAYYLLLTIFPLIVIAANIFPYLDID--LPDVLSFLRANLPSEIY 74
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-WYITRLI 134
+ + + A P+ G+ ++ LA + S + +L+ + N+AY V + R +
Sbjct: 75 ANVAGIVRNLFATPSNGILGVATLAGFWTMSRSLTSLQKAFNKAYDVSQHRDVVVGHIVG 134
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + + ++ + A +++ + L+ ++ + +L ++IGL
Sbjct: 135 IVASFFILFLLTFALLLSTLSDGVYQAALQRKYDVPSGLIKLLLHLNRPIMVLVVWIGLT 194
Query: 195 FVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ LP K KI +PG I + I + L Y+ SI+ ++
Sbjct: 195 VLYFILPNVKIRKIRYTIPGTILSAIVIIFMTGLVGDYVTHTFNNLVDIKFFGSIIIFII 254
Query: 254 FLY--MLGVFFILGAELNAS 271
+ +L I GA LNA+
Sbjct: 255 MFWFVLLARILITGAVLNAT 274
>gi|290956470|ref|YP_003487652.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260645996|emb|CBG69087.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 347
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 109/274 (39%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLSV P ++ L G++ T+ +
Sbjct: 8 WLLLKDTVNSCIEYRILGLAAEAAFFTLLSVPPLLLSMIGLLGYVDDWTGADTIASLELN 67
Query: 69 AWPEV--------IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+A+ + V+ + +I L A + S V ++ Y
Sbjct: 68 LLEASRTVLSEKGVAQIAQPILDDVMKGGRPDVISIGFLFALWSGSRAVNVFIDTITVMY 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ +R TRL++F L+A + I + VA P A+ + + ++
Sbjct: 128 GLDGVRGIVKTRLMAFLLFLVALLIGSIALPLMVAGPDAVVRIVPWS------ATVVQVL 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ + L ++ +S + +PG + WV+G+ L Y+ +T
Sbjct: 182 YWPVVIVLSIVFLTTLYHVSVPVRSPWVEDVPGALVALGMWVLGSFLLRIYLTNTVEGAT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 242 IYGSLAAAVAVLLWIGVGAFAVLVGAAVNAAIDR 275
>gi|301058912|ref|ZP_07199883.1| YihY family protein [delta proteobacterium NaphS2]
gi|300446986|gb|EFK10780.1| YihY family protein [delta proteobacterium NaphS2]
Length = 448
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 105/268 (39%), Gaps = 2/268 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + A+ F E+ AS ++ +LLS+ P + +A G + +
Sbjct: 34 KAFHIRTLRTVLLAVRAFNEDQCMFRASALTFYSLLSIVPVLAMAFGIAKGFGFQKALEH 93
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
+ F E + + IT +L GL + L + + + + N+
Sbjct: 94 QLQETF-YGHEEVIQNITVFANSMLETTKGGLIAGVGVLILFWTVIRVLGNVEGAFNQIL 152
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E RS +++ + L++ S + V I + + F LG + I+
Sbjct: 153 NFPESRSLARKVSDYMSTMVICTFLLILSSTLTVVIKSQVTSAVESFSILGTVSPAIFFL 212
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ F+++FLP K +LP + T + + + + + + Y+
Sbjct: 213 LKLLPYCVIWLLFTFLYMFLPNGKISWKFVLPAAVATGTLFQLFQWGYVSFQIGVTRYNA 272
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ LV+L + + + GAEL
Sbjct: 273 IYGSFAALPLFLVWLQISWLIVLFGAEL 300
>gi|284991960|ref|YP_003410514.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284065205|gb|ADB76143.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 354
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 105/278 (37%), Gaps = 9/278 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG----FLGAHQFVP 60
+ ++ + + +++ + +LSV P ++ G F+G
Sbjct: 49 LRVPLQVLGRTVAKAWHDRILGLSAEAAFWQILSVPPLLIGLLGTLGYLGTFIGDASVAR 108
Query: 61 TVIDVVFG----AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
++V P+V+ + + +L L ++ L + + S+ ++
Sbjct: 109 IEAELVRASTEVLTPDVVEGLVQPTLDDILGSGRLDLVSVGFLLSLWAGSSATATFMNTV 168
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
AY ++R TRL + ++ + V+ + V L + G ++
Sbjct: 169 VIAYDQRDVRGPIRTRLKALWLFVVGLLLAVVTLPLLVLGRGVLVSLLP-ADWRGTATVL 227
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ ++ L + L + + + LPG + +VV A+ Y+
Sbjct: 228 VNAVYWPVVLVGLLLALTSFYHVVLPRRLPWHRHLPGTVLAVAFFVVTALATRTYVADIL 287
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T + Y LA+ + L+F + G+ +LGAELNA++
Sbjct: 288 TTTLPYGALATPIAVLLFCFFFGMSVLLGAELNATIQA 325
>gi|118581183|ref|YP_902433.1| putative ribonuclease BN [Pelobacter propionicus DSM 2379]
gi|118503893|gb|ABL00376.1| tRNA-processing RNAse BN [Pelobacter propionicus DSM 2379]
Length = 417
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 111/268 (41%), Gaps = 6/268 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + Y F G A+ ++ + +LS+ P + + LGA +
Sbjct: 1 MKGRLFDLLRFCYLVRAGFSLHQGALRAAALTYTTMLSLVPVLAIAFAVLKGLGAQNTLE 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ G + I+ + V K + I L + + + ++ N +
Sbjct: 61 PVLQRFAG----DSQETISRIVAYVNNTNFKSIGAIGLLVLVMTVISLLGNIEMAFNTIW 116
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E RS + R S ++ ++I+ + L +V K+ L + +
Sbjct: 117 GVRETRS--LQRRFSDYLSVVVVGPILILVATSMTTSLQNQWVVKWLLLHEYLGEAVLSV 174
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++++I L+F+++++P + + S L G I +W + + H+ V + Y+
Sbjct: 175 FRLSPYVSVWIALVFLYIYIPNTRVRFRSALLGGILAGTAWQMAQWAYFHFQVGVANYNA 234
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y LA++ LV++Y + +LG E+
Sbjct: 235 IYGTLAALPVFLVWVYTSWLIVLLGLEI 262
>gi|157373443|ref|YP_001472043.1| ribonuclease BN [Shewanella sediminis HAW-EB3]
gi|157315817|gb|ABV34915.1| putative ribonuclease BN [Shewanella sediminis HAW-EB3]
Length = 298
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 109/265 (41%), Gaps = 8/265 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIA 75
+ E+ A H++ LLS+ P + ++ + I+ ++ +
Sbjct: 6 QRLAEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFSGIRGQIEGFIYNNFLPAAG 65
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I + ++ +KG + A + + A+ +LN +R E RS ++ +
Sbjct: 66 DTVQVYINEFVSNASKG-TAVGIAALMVVAIMLISAIDKALNNIWRTTEKRSMVVSFSM- 123
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
Y ++ ++ V+M VA ++ L ++ ++ M +
Sbjct: 124 --YWMVLTLGPVLMGASLVATSYVVSLKVFNGSDLSGVVPVLVER---LPMFFSVATFLL 178
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+++ +P K K L G I + + G F Y+ F TY +Y LA+I +++
Sbjct: 179 IYMVVPNIKVKFFHALLGAIVAALLFEFGKKGFAIYLTKFPTYEAIYGALATIPILFMWV 238
Query: 256 YMLGVFFILGAELNASMIIYYWRKK 280
Y+ + +LGAE+ A+M Y +++
Sbjct: 239 YLSWIIVLLGAEITAAMPEYLDKRQ 263
>gi|39997555|ref|NP_953506.1| ribonuclease BN [Geobacter sulfurreducens PCA]
gi|39984446|gb|AAR35833.1| ribonuclease BN, putative [Geobacter sulfurreducens PCA]
Length = 397
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 97/253 (38%), Gaps = 5/253 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ +F+++ AS ++ S LLS+ PF + LG + +
Sbjct: 1 MGNFMDDQCLLHASALTYSTLLSIVPFFALAFAVLKGLGVQNTLEP---FILDQVAAGSH 57
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + + + L + + + + + + N + V E RS Y R S
Sbjct: 58 EIVDRIVTYINNTKVGSLGAVGLVTLVVSTVTLLGNIEETFNSIWGVRETRSLY--RRFS 115
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
++ ++I + + V L ++ L ++ +++++ L+F
Sbjct: 116 DYLSVVVFGPILIFAAISVTTTLESQKAVQWLIGTAYLGDVLVAAFRLVPYVSIWLALVF 175
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+++ +P K + S L G + W + H+ V + Y+ +Y LA + +++L
Sbjct: 176 LYMLIPNTKVRFRSALVGGVIAGTLWQAAQWGYIHFQVGVAKYNAIYGTLAVLPVFMIWL 235
Query: 256 YMLGVFFILGAEL 268
Y + G E+
Sbjct: 236 YASWSIVLFGVEV 248
>gi|226195661|ref|ZP_03791248.1| outer membrane porin [Burkholderia pseudomallei Pakistan 9]
gi|225932146|gb|EEH28146.1| outer membrane porin [Burkholderia pseudomallei Pakistan 9]
Length = 822
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 102/265 (38%), Gaps = 17/265 (6%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG----LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
A + + ++G L + + LA +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLA--LGASATFASLNTALSVIWPATGARAS 139
Query: 127 ---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 140 SVLGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFS 195
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 196 IGIAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFG 254
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
S L++LY +LGAE
Sbjct: 255 AAGSFAVLLMWLYFSAAVLLLGAEF 279
>gi|91794795|ref|YP_564446.1| ribonuclease BN [Shewanella denitrificans OS217]
gi|123356418|sp|Q12IK3|Y3448_SHEDO RecName: Full=UPF0761 membrane protein Sden_3448
gi|91716797|gb|ABE56723.1| tRNA-processing RNAse BN [Shewanella denitrificans OS217]
Length = 313
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 57/280 (20%), Positives = 119/280 (42%), Gaps = 18/280 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ V+ I +++ A H++ LLS+ P I ++ + +
Sbjct: 11 RYFYISVWRFILHLKARLIDDQINIRAGHLAYVTLLSLVPMIAVTMSMLSAFPVFKGIRV 70
Query: 62 VID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I+ +V+ + I + + +KG F + +A + + A+ +LN +
Sbjct: 71 NIESLVYSYFLPAAGDSAQVYINEFVNNASKGTF-VGIIALLVVAILLISAIDKALNNIW 129
Query: 121 RVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
R E RS ++ +++ G VL+ S +LV S+V + + + P L L
Sbjct: 130 RTTEKRSLVVSFSMYWMVLTLGPVLMGS-SLVATSYVVSLELFSQSELSGLLPWLVERL- 187
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
ML ++ +++ +P K + L G + + + G F +Y+ F
Sbjct: 188 ---------PMLFSVASILLLYMVVPTQKVRFFHALLGAVVAALLFEAGKRAFAYYVTQF 238
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y +Y LA+I V++Y+ + ++GAE+ A++ Y
Sbjct: 239 PSYEAIYGALATIPILFVWVYLSWMIVLVGAEITAALPEY 278
>gi|29828664|ref|NP_823298.1| ribonuclease BN-like family integral membrane protein [Streptomyces
avermitilis MA-4680]
gi|29605768|dbj|BAC69833.1| putative integral membrane protein, ribonuclease BN-like family
[Streptomyces avermitilis MA-4680]
Length = 345
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 102/263 (38%), Gaps = 14/263 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV------ 73
+E +A+ + LLSV P ++ L G++ T+ +
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLSMIGLLGYVDDWTGADTIASLENNILEASRTVLSD 60
Query: 74 --IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + V+ + ++ L A + S V ++ Y + R T
Sbjct: 61 KGVTEIAQPLLHDVMKGGRPDVISLGFLFALWSGSRAVNVFIDTITVMYGLDGTRGIVKT 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R++SF ++A + + + VA P A+ V + ++ ++ +
Sbjct: 121 RMMSFLLFIVALLIGSVALPLMVAGPDAVVNVVPWS------TTVVQVLYWPVVIVLSIV 174
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ +S + +PG + WV+G+ L Y+ + T+Y LA+ +
Sbjct: 175 FLTTLYHVSVPVRSPWVEDVPGALVALAMWVLGSFLLRIYLTSTVEGPTIYGSLAAPVAV 234
Query: 252 LVFLYMLGVFFILGAELNASMII 274
L+++ + ++GA +NA++
Sbjct: 235 LLWIGVSAFAVLVGAAVNAAIDR 257
>gi|167828963|ref|ZP_02460434.1| outer membrane porin [Burkholderia pseudomallei 9]
Length = 819
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 102/265 (38%), Gaps = 17/265 (6%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPAKG----LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
A + + ++G L + + LA +S +L +L+ + R
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGTAALISFAMLA--LGASATFASLNTALSVIWPATGARAS 136
Query: 127 ---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 137 SVLGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFS 192
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 193 IGIAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFG 251
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
S L++LY +LGAE
Sbjct: 252 AAGSFAVLLMWLYFSAAVLLLGAEF 276
>gi|332284550|ref|YP_004416461.1| ribonuclease [Pusillimonas sp. T7-7]
gi|330428503|gb|AEC19837.1| ribonuclease [Pusillimonas sp. T7-7]
Length = 468
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 100/277 (36%), Gaps = 9/277 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
I A++ E+ +AS ++ + +LS+ P + L ++
Sbjct: 42 LRNFRKIARFALQRAAEKKLTQVASSLTFTTVLSIVPLLAVVLALFTAFPLFGDFQLALE 101
Query: 65 VV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
P ++ + Q A A GL L S + + N ++V
Sbjct: 102 DFLTRNLMPPSVSDNAMLYLNQ-FAAKASGLTAAGTLFLIVTSVMLFMTIDQAFNSIWQV 160
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R L+ + + L V + + + R+ + L +I
Sbjct: 161 ERQRPLRQRMLVYWAIISLGPVLIGASLWATSVL------ARESLGDVNELPALIGFALS 214
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ MLA +G + + +P K L G T I + + F +Y+ F +Y+ +Y
Sbjct: 215 FVPMLATGLGFTALFVTVPNRKVLWKDALTGGFGTAIVLEIMRIGFAYYLTRFPSYTVIY 274
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A++ L++LY+ + +LGA + + + R+
Sbjct: 275 GAFATLPIFLLWLYLSWLVVLLGATVASILPDLRMRR 311
>gi|152998866|ref|YP_001364547.1| ribonuclease BN [Shewanella baltica OS185]
gi|166199584|sp|A6WI45|Y314_SHEB8 RecName: Full=UPF0761 membrane protein Shew185_0314
gi|151363484|gb|ABS06484.1| putative ribonuclease BN [Shewanella baltica OS185]
Length = 323
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWHFLLHLRRRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEGFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + Y ++ ++ V++ VA ++ AL +L I
Sbjct: 129 WRTKEKRSVVVAFSM---YWMVLTLGPVLVGASLVASSYVISLKVFEAEALSGMLPIFIA 185
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G I + + +G F Y+ F +Y
Sbjct: 186 R---LPMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFELGKKGFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPIVFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|300778688|ref|ZP_07088546.1| YihY family protein [Chryseobacterium gleum ATCC 35910]
gi|300504198|gb|EFK35338.1| YihY family protein [Chryseobacterium gleum ATCC 35910]
Length = 337
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 107/274 (39%), Gaps = 4/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DV 65
++ + I + A+ IS S +S+FPFI+F ++ ++ + + I +
Sbjct: 28 LWQMFQIYISGIFKGKIGRKAAAISWSFTISLFPFILFLLSVLPYMPHYAKLQFYIFEVL 87
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ +P + I I + KG+ ++ L A F++NG +L N E
Sbjct: 88 MHNVFPSNMEGDIRGYIEANIVPNMKGISNLTILLALLFATNGTFSLINGFNE--NSDEK 145
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
S ++SF + + + F + + + + + +
Sbjct: 146 LSDVKEFILSFFITIGFITIVFLALFGVYYAEVVMRPFTPAYEITWLVDNLSKIIGFVSF 205
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L FI L + ++ +PG I T + +VV +F Y+ + Y+ +Y +
Sbjct: 206 PLFYFILLTLFYWLGTVKITRFRQAVPGAILTTVLFVVTTYIFAIYVKDIARYNVLYGSI 265
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ +V++ + + G ELN ++ K
Sbjct: 266 GSMILLMVWVNVNVYLLLFGNELNMAIRKLRIEK 299
>gi|291436493|ref|ZP_06575883.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291339388|gb|EFE66344.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 348
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 107/272 (39%), Gaps = 14/272 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVI 63
++ D + +E +A+ + LLSV P ++ L G++ ++
Sbjct: 1 MLKDTVNSCMEYRILGLAAEAAFFTLLSVPPLLLSLIGLLGYVDAWTGADTIQSVQRNLL 60
Query: 64 DVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
D + + + + V + ++ L A + S V ++ Y +
Sbjct: 61 DASRTVLSDRGVKEIAEPILRDVTKGGRPDVISLGFLIAVWSGSRAVNVFIDTITVMYGL 120
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+R TRL++F ++A + + + VA P A+ + + L +L
Sbjct: 121 DGVRGIVKTRLLAFLLFIVALLIGSVALPLMVAGPDAVVRIVPWSTTLVQILY------W 174
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L L ++ +S + +PG + WV+G+ L Y+ + T+Y
Sbjct: 175 PVVILLSVAFLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRLYLTSTVEGPTIY 234
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA+ + L+++ + ++GA +NA++
Sbjct: 235 GSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 266
>gi|17230885|ref|NP_487433.1| hypothetical protein alr3393 [Nostoc sp. PCC 7120]
gi|17132488|dbj|BAB75092.1| alr3393 [Nostoc sp. PCC 7120]
Length = 314
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 106/283 (37%), Gaps = 11/283 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
++ + +A + + ++ +A+ ++ + S+ P ++ +AG G +
Sbjct: 14 NLKAIWQLFQEAFQEWNDDKASRLAAALAYYTVFSIAPLLIIVIAIAGAVFGEEAARGEI 73
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYR 121
+ + G A+ I I V + ++ ++A + GV L+ SLN +
Sbjct: 74 VQQIQGLVGRDGAEFIETAIQNVDRPKTGTIASLISIALLLLGATGVFIELQDSLNTIWE 133
Query: 122 VVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V ++ + R +SFG VL L++ + + + Y P + L +
Sbjct: 134 VQPKPGRGVKNIFRQRFLSFGMVLGIGFLLLVSLVISTVLSTLVNYFGGLLPGVDFLWQL 193
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + LP + +L G I T I + +G L Y+ +
Sbjct: 194 VN---FIISFAITTLLFALIFKVLPDVRITWNDVLVGAILTSILFSIGRFLLGQYLGN-A 249
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + Y S++ L ++Y GAE Y R+
Sbjct: 250 GFGSAYGAAGSVVLILAWVYYTAQILFFGAEFTQVYARKYGRR 292
>gi|126172568|ref|YP_001048717.1| ribonuclease BN [Shewanella baltica OS155]
gi|160873444|ref|YP_001552760.1| ribonuclease BN [Shewanella baltica OS195]
gi|166199583|sp|A3CZD5|Y315_SHEB5 RecName: Full=UPF0761 membrane protein Sbal_0315
gi|189039572|sp|A9KXA4|Y319_SHEB9 RecName: Full=UPF0761 membrane protein Sbal195_0319
gi|125995773|gb|ABN59848.1| tRNA-processing RNAse BN [Shewanella baltica OS155]
gi|160858966|gb|ABX47500.1| ribonuclease BN [Shewanella baltica OS195]
gi|315265673|gb|ADT92526.1| ribonuclease BN [Shewanella baltica OS678]
Length = 323
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWHFLLHLRRRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEGFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + Y ++ ++ V++ VA ++ AL +L I
Sbjct: 129 WRTKEKRSVVVAFSM---YWMVLTLGPVLVGASLVASSYVISLKVFEAEALSGMLPIFIA 185
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G I + + +G F Y+ F +Y
Sbjct: 186 R---LPMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFELGKKGFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPIVFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|209963912|ref|YP_002296827.1| tRNA-processing ribonuclease BN [Rhodospirillum centenum SW]
gi|288559240|sp|B6IRC8|Y578_RHOCS RecName: Full=UPF0761 membrane protein RC1_0578
gi|209957378|gb|ACI98014.1| tRNA-processing ribonuclease BN [Rhodospirillum centenum SW]
Length = 444
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 107/270 (39%), Gaps = 11/270 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
++ A+ F +G+A+A+ ++ + LL++ P + + A+ + T +++F +
Sbjct: 24 VVRHAVPRFWNNNGFAIAASLTYTTLLALVPLLTVTFAIFSAFPAYGRLRDTARELIFDS 83
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
++ + Q ++ A L + + S ++ +LN +R E R
Sbjct: 84 LAPSVSDEVQAYFDQFISN-AAALTGFGVIGLSLTSILLFFSVEAALNVIFRATEPRPLV 142
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I RL+SF VL L+ S + +A + R L
Sbjct: 143 I-RLLSFWAVLTIMPLLLGASLSVTSGVVA--------DLQATGRDAVTVLRFMLPGLLE 193
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L +P + + L G I + V V F YI F TY T+Y L+ I
Sbjct: 194 AAAFTLMFLMIPNREVQWFDALVGGIAAALLMEVSKVGFGLYIAAFPTYETIYGALSVIP 253
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +LY + + GAE+ A++ + K
Sbjct: 254 IFLFWLYTVWSVVLFGAEITATLPEWRAGK 283
>gi|217971528|ref|YP_002356279.1| ribonuclease BN [Shewanella baltica OS223]
gi|254789781|sp|B8E4B5|Y320_SHEB2 RecName: Full=UPF0761 membrane protein Sbal223_0320
gi|217496663|gb|ACK44856.1| ribonuclease BN [Shewanella baltica OS223]
Length = 323
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWHFLLHLRRRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEGFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGISALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + Y ++ ++ V++ VA ++ AL +L I
Sbjct: 129 WRTKEKRSVVVAFSM---YWMVLTLGPVLVGASLVASSYVISLKVFEAEALSGMLPIFIA 185
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G I + + +G F Y+ F +Y
Sbjct: 186 R---LPMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFELGKKGFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPIVFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|169823942|ref|YP_001691553.1| putative ribonuclease [Finegoldia magna ATCC 29328]
gi|302380011|ref|ZP_07268490.1| YihY family protein [Finegoldia magna ACS-171-V-Col3]
gi|303234370|ref|ZP_07321009.1| YihY family protein [Finegoldia magna BVS033A4]
gi|167830747|dbj|BAG07663.1| putative ribonuclease [Finegoldia magna ATCC 29328]
gi|302312237|gb|EFK94239.1| YihY family protein [Finegoldia magna ACS-171-V-Col3]
gi|302494486|gb|EFL54253.1| YihY family protein [Finegoldia magna BVS033A4]
Length = 284
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 43/264 (16%), Positives = 108/264 (40%), Gaps = 8/264 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ +++ + ++S+ PF++ N+ + A + +I
Sbjct: 12 FFKKLLQSIKDDQIPLLSAQTTYHFIMSLVPFLIVLLNIVLMVAASKI--DLIFKSMEVL 69
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + ++ + + +IS L A + SS +++L ++N+A+ V +
Sbjct: 70 PDETRNILMTLVNTIINNRSSSVLSISLLVALWSSSKALKSLITAMNKAFDVRSENGFLK 129
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
T+L S + ++ + L++ L L + ++ I+ R ++++
Sbjct: 130 TQLKSILFTVVLLLLLMVTLVFIAFGGLILNLIEQYMKIRIPYFAQIF--RYLIPIVSMI 187
Query: 191 IGLIFVHLFLPA----AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
G ++ F P K S + G I W++ +L++ Y+ S S Y L
Sbjct: 188 FGFTLLYKFAPDFDSTRSIKWKSAMLGGTIATIGWLLITLLYSFYVSNISNMSLTYGPLV 247
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+ V++ + ++ AE+ A
Sbjct: 248 GVFALFVWINLSSQIILISAEITA 271
>gi|332708514|ref|ZP_08428488.1| putative membrane protein [Lyngbya majuscula 3L]
gi|332352611|gb|EGJ32177.1| putative membrane protein [Lyngbya majuscula 3L]
Length = 323
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/285 (20%), Positives = 118/285 (41%), Gaps = 14/285 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVV 66
+ ++ + + + E++ +A+ +S + S+ P ++ + G G +++ +
Sbjct: 13 ILGLLKETFKEWKEDNASRLAAALSYYMIFSLAPVLIIAIAIVGSIFGEEAAKGEIVEQI 72
Query: 67 FGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVV- 123
G E A+ I I + GL ++ ++ F ++GV L+ +LN + V
Sbjct: 73 QGLVGEQGAQFIQTAITNANRPDASGGLASLISIVVLLFGASGVFGELQDALNTIWDVKL 132
Query: 124 -EMRSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
R + R++SF VL + L++ + + A+ +Y +F LG L L +
Sbjct: 133 KPGRGIWGILKKRILSFLTVLGVGLFLLLSAVISTALSAVRSYKSEFLQELGLLWLYQLD 192
Query: 180 GRI-----YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ L + V+ +LP K + G I T + + +G L + Y+
Sbjct: 193 FVWTILDLLVSFGILSLMFALVYKYLPDVKIAWKDVWVGAIITTLLFNLGKWLLSWYLGR 252
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++S+ Y S++ L ++Y LGAE + K
Sbjct: 253 -SSFSSSYGAAGSLVVLLAWVYYSSQIIFLGAEFTQVYAKIFGSK 296
>gi|187919163|ref|YP_001888194.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
gi|187717601|gb|ACD18824.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
Length = 443
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A + F E AMA+ I+ A S+ P +V +AG F GA + + + G +
Sbjct: 25 AFKQFAENRCAAMAASIAFYAAFSLAPTLVMVIAVAGWFFGAEAARGELFNHIHGLLGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS---- 127
A + + + G IS + +S +L +LN + RS
Sbjct: 85 AAAGVQTIVENAHHSGSAGGIAAVISLVTLVIGASATFSSLNSALNIVWPNTGPRSSSVI 144
Query: 128 -WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RLISFG VL + L++ + + +V K+ ++I ++ +
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVL----DTVITFVGKWLWGDSPYIVIGNLLQLGVGL 200
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L + FLP A+ + G I + + G LF Y+ + +T +
Sbjct: 201 LVLAFAFAGLLKFLPDARVRWRDAFVGGIVAAVLFSAGKKLFALYLAH-AGMATSFGAAG 259
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S+ L++LY +LGAE +A+
Sbjct: 260 SLAVLLMWLYFSAAVLLLGAEFSAA 284
>gi|58698244|ref|ZP_00373163.1| ribonuclease BN, probable , putative [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535216|gb|EAL59296.1| ribonuclease BN, probable , putative [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 241
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P+ I + I ++++ P + L T++ + A + +S+ +E LR LN+AY+V
Sbjct: 36 FIIDNMPQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKAYKVPV 95
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ + R++S L+ ++ + + +P+ + + + R
Sbjct: 96 SPPYILRRVLSILQFLVITLIITLTIVFSTLVPMLIDFSYQGLSY----------TRYLL 145
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYA 243
LF + +++ LP K + + PG I W + A F Y+ +F +Y
Sbjct: 146 IEFVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQLDLIYG 205
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++ L+F YML + FI GA+ N + + +
Sbjct: 206 SLGGVVVSLLFFYMLSLIFIYGAKFNFQLKYFNGSR 241
>gi|254393002|ref|ZP_05008166.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|326444080|ref|ZP_08218814.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
gi|197706653|gb|EDY52465.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 376
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 109/276 (39%), Gaps = 14/276 (5%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------HQFV 59
+ + ++ D + +E +A+ + LLS+ P ++ L G++
Sbjct: 1 MTWLLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLMLGLLGLLGYIDDWTNTTTVASIE 60
Query: 60 PTVIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+++ E + + V L +I A + S V ++
Sbjct: 61 QNILNAAGTVLSERGVNDVARPLLEDVTHGGRPDLISIGFAIALWSGSRAVNVFIDTITV 120
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y + R TRL++F L+A V ++ + V P V ++ P L+ +++
Sbjct: 121 MYGLDGRRGIVATRLLAFLLYLIALVIGAVVLPLAVVGP---DRVVEWVPWGTTLVTVLY 177
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+L L ++ +S + +PG + WV+G+ L Y+V+
Sbjct: 178 ---WPVVILLSVAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLVSTVEG 234
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 235 PTIYGSLAAPIAVLLWIGISAFAILVGAAVNAAIDR 270
>gi|319943764|ref|ZP_08018045.1| YihY family protein [Lautropia mirabilis ATCC 51599]
gi|319742997|gb|EFV95403.1| YihY family protein [Lautropia mirabilis ATCC 51599]
Length = 653
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 109/263 (41%), Gaps = 4/263 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + + A+ + + LLS+ P + +++ G H + +
Sbjct: 29 FLKALAVFLAVVRDLAFGQLMLRATSLVYTTLLSIVPVLALTFSVSKAFGVHGQIEPALQ 88
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV 123
A+ IT I+ + G+ ++ + + + + + S+N + V
Sbjct: 89 RFMEPLGPKGAE-ITTNIMSFIDNMHVGVLGSVGLGMLLFTAVSTILKIESSINTIWHVK 147
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
MR +++ IS+ ++ ++++S + + LA +++ + ++ +
Sbjct: 148 TMRP--LSQRISYYLCVMLLGPILVVSALGLNATLASSHLVQMIISVEPFGHLAVLAGRL 205
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + +F++LF+P + +++ L + I W F ++ + Y+ +Y+
Sbjct: 206 LPYVLVIGLFLFLYLFMPNTRVRLLPALTSALVAGICWQSAGWAFARFVAGSTQYAAIYS 265
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
LA ++ +++LY+ + ++GA
Sbjct: 266 SLAILIIFMIWLYVSWIVVLVGA 288
>gi|21224436|ref|NP_630215.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|256784372|ref|ZP_05522803.1| integral membrane protein [Streptomyces lividans TK24]
gi|289768251|ref|ZP_06527629.1| integral membrane protein [Streptomyces lividans TK24]
gi|13276834|emb|CAC33952.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289698450|gb|EFD65879.1| integral membrane protein [Streptomyces lividans TK24]
Length = 344
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 104/263 (39%), Gaps = 14/263 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------HQFVPTVIDVVFGAWPE 72
+E +A+ + LLSV P ++ L G++ + ++D E
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLSLLGLLGYVDSWIGADTTESLRDNILDASRAVLSE 60
Query: 73 -VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + V+ + +I L A + S V ++ Y + +R T
Sbjct: 61 KGVRQITEPILDDVMKGGRPDVISIGFLFALWSGSRAVNVFIDTITVMYGLDGVRGIVRT 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RL++F ++A + I + VA P A+ V + ++ ++
Sbjct: 121 RLMAFLLFIVALLIGSIALPLMVAGPDAVVRVVPWS------TTVVQVLYWPVVIILSVA 174
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ +S + +PG + WV+G+ L Y+ + T+Y LA+ +
Sbjct: 175 FLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRIYLTSTVEGPTIYGSLAAPVAV 234
Query: 252 LVFLYMLGVFFILGAELNASMII 274
L+++ + ++GA +NA++
Sbjct: 235 LLWIGVSAFAVLVGAAVNAAIDR 257
>gi|269929254|ref|YP_003321575.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
gi|269788611|gb|ACZ40753.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
Length = 313
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 114/275 (41%), Gaps = 10/275 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFG 68
D+ + A +F+ G A+ IS L S FP ++ + G F+ T+ D V
Sbjct: 35 DLFWRAARNFIRLQGQIYAAAISYYVLFSFFPLLLLSVAVLGWFVRDPDINATITDAVLA 94
Query: 69 AWPEVI-AKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR 126
P + + + +L L P G+F + L + +S ALR LNR + V R
Sbjct: 95 QIPPELGLQEPVEGLLDDLGAPGGGVFGLIGLVGLAWTASGVFGALRRVLNRVFAVPSNR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ R I ++ L++ + + + + L + +F L L+ + W
Sbjct: 155 SFVHARAIDLLAMICVPTLLILSTLLTLGLRLVRTFASDYFDGL--LIRVAWGVVFLLVP 212
Query: 187 LAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
LA F + ++ +P + + + G +F + + + F Y+ + T+Y L
Sbjct: 213 LATSFAVFLLLYRLVPNLRPEFADLWAGALFAAVGFELAKAGFGFYVTEVGDFQTLYGPL 272
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+T LVF+Y++ I G ++ WR +
Sbjct: 273 GGAVTFLVFVYLVANVVIFGG----GIVAERWRDR 303
>gi|296537248|ref|ZP_06899146.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
gi|296262424|gb|EFH09151.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
Length = 311
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 52/277 (18%), Positives = 113/277 (40%), Gaps = 9/277 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
+ +I + F+E+D + + I+ + S+ P ++ +AG G +++ +
Sbjct: 5 WWLIRQTVLGFIEDDALSRGAAIAFYTVTSLAPVLIIAIAIAGSVFGEDAARGAIVEQLG 64
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVVEMR 126
G A+ + I+ + L ++ +A +++GV ++ SLN+ +R
Sbjct: 65 GLMGAAGAELVQSIIVSASNPTSGLLASVFGIATLLLTASGVFGEIQASLNQIWRAEPRT 124
Query: 127 S---WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
S R S G V L++ V A+ + PA + L + +
Sbjct: 125 SVSRLLQARAASLGLVATLGFLLLVSLVVSAALTALGQALDGHLPA---VALAVRLANVV 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + ++ LP K + ++ G I T + + +G L Y+ + S T Y
Sbjct: 182 ISFALVALLFAAIYKILPDRKLEWRDVMVGAIATTLLFNLGKTLIGLYLGS-SAIGTTYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S + L+++Y F+LGAE + ++ ++
Sbjct: 241 AAGSAVIVLLWIYYSAQIFLLGAEFTKAWAMHRDARR 277
>gi|85709785|ref|ZP_01040850.1| hypothetical protein NAP1_12908 [Erythrobacter sp. NAP1]
gi|85688495|gb|EAQ28499.1| hypothetical protein NAP1_12908 [Erythrobacter sp. NAP1]
Length = 277
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 94/268 (35%), Gaps = 16/268 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
I+ + +A+ ++ A LS P + G L V +
Sbjct: 16 YLHILKAGWTKAQANNAGLLAAGVTYYAFLSFMPLLAAIVLTYGLLADPALVAENSRELA 75
Query: 68 GAWPEVIAKPITDEILQVLAVPA--KGL-FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P A+ I D++ + GL ++ + + + A+ + N A+ E
Sbjct: 76 RTLPPSAAELIGDQLKDITDNRTDTSGLGLILAIALSIFAARVAAGAVITAFNVAFAAAE 135
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L++ + A + +++ + A++ + +L
Sbjct: 136 SRGFIKANLLALCITVGAIIAFGLVAALTTLATNAISNSGEAAASL------------VV 183
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+A G + + +P + G + + W++ + F Y F Y+ Y
Sbjct: 184 AAIAGLGGALLAYRIVPNVDDVTLREAFRGALPFAVGWMIASAGFAWYAANFGNYNATYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
L +I+ L +LY+ +LGA + A+
Sbjct: 244 SLGAIVVFLTWLYLSAYLLLLGAHIAAA 271
>gi|264679388|ref|YP_003279295.1| ribonuclease BN [Comamonas testosteroni CNB-2]
gi|262209901|gb|ACY33999.1| putative ribonuclease BN [Comamonas testosteroni CNB-2]
Length = 596
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 103/262 (39%), Gaps = 13/262 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPE 72
+ F E+ AS ++ ++LL++ PF L V++ ++ PE
Sbjct: 203 LLARFKEDRLGVTASSLTFTSLLALVPFFTVALALFTAFPIFGKAQKVLERWLMDSLIPE 262
Query: 73 VIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
IA+ + + Q + ++ GL S L + + + +LN +RV ++R
Sbjct: 263 TIARQVLGYLTQFASKASQLGLVGFSIL--MVTAIALILTIDRTLNNIWRVRQLRPLGQR 320
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-YATMLALF 190
VL+ + + + + +YV + N L + L
Sbjct: 321 -------VLIYWAAITLGPLLLGLSLVLSSYVMSASKGMVNALPGSLRFVFDSIEFVVLA 373
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
G+ ++ ++P + L G +F + V + Y+ + TYS +Y A++
Sbjct: 374 AGMAGLYHYVPNTPVRWRHALVGGVFVAVFMEVAKKVLGLYLSSVPTYSVIYGAFATLPI 433
Query: 251 CLVFLYMLGVFFILGAELNASM 272
L+++Y+ +LGA + A +
Sbjct: 434 LLIWMYVAWSIVLLGALVTAYL 455
>gi|163788022|ref|ZP_02182468.1| hypothetical protein FBALC1_06573 [Flavobacteriales bacterium
ALC-1]
gi|159876342|gb|EDP70400.1| hypothetical protein FBALC1_06573 [Flavobacteriales bacterium
ALC-1]
Length = 315
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 115/275 (41%), Gaps = 5/275 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+D++ + V+ AS I+ S ++FPF++F L + F +D +
Sbjct: 35 VYDLLELYVLGIVKGTLTTRASAIAFSFFTAIFPFLLFVIILMPHIPIEGFQKEFLDFLN 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I ++ GL + L + +NGV A+ +Y R
Sbjct: 95 SVLPPQTSDFFVSNIFDNISGGTGTGLLSSVFLLSMLLMANGVNAVFSGFENSYHEQLTR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKFFPALG---NLLLIIWNGRI 182
+ + L + G L+ +V +++ VF + +A + K F + + I +
Sbjct: 155 NVFQQYLYALGVALILAVLVLLTVAVFGYFQIYIIAPIYKTFTGEAVTVSGIGWIIFAKY 214
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ +++ ++ F G + T + ++ + LF YI FS Y+ +Y
Sbjct: 215 MFFVIMVYMATATLYYFGTKEGRYTRFFSVGALLTTLLIILTSYLFGIYIDNFSQYNKLY 274
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +++ L++L++ +LG ELNAS+ +
Sbjct: 275 GSIGALLILLLYLWLNSNILLLGYELNASLRRLHK 309
>gi|257455356|ref|ZP_05620591.1| tRNA-processing RNAse BN [Enhydrobacter aerosaccus SK60]
gi|257447318|gb|EEV22326.1| tRNA-processing RNAse BN [Enhydrobacter aerosaccus SK60]
Length = 673
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 120/272 (44%), Gaps = 8/272 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFG 68
+ I++F++++ A+ ++ + LLS+ P + + + I +++F
Sbjct: 20 QFLMYLIKNFIDDNCSQKAALLTYTTLLSIVPILTLLVVILSTIPQLAEAREQIQNLIFS 79
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVEMRS 127
+T + Q + + TI + +F++ + + + + N+ +RV + +
Sbjct: 80 NILPSTGLQVTKYLNQFTSNSSN--LTIIGVGILFFTTISTLMTIETAFNQIWRVEKKET 137
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ L+ + ++ ++ + + + +L+++ + G + IW ++
Sbjct: 138 SWLN-LVRYWVIITLLPIVLAIVMIISSTVQSLSFLNQKIGGYG-IDWAIW--VQIGSIA 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ +GL+ ++ F+P + + L + I + + + F + F++Y +Y A
Sbjct: 194 IVLMGLVTMYWFIPRCQVRFKHALVAGVVVGIIFEILKLTFGAIVDNFTSYKAVYGAFAI 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L+++Y+ +LG +++ + I+ ++
Sbjct: 254 LPLFLLWIYISWNIILLGVQISYCLTIFETKE 285
>gi|284164911|ref|YP_003403190.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284014566|gb|ADB60517.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 397
Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 100/258 (38%), Gaps = 15/258 (5%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ E++ MA+ I+ A +S+ P +V L F+G F V G P+
Sbjct: 13 KTVVGGIQEKNVPFMAASIAYQAFISLLPLLVLVFFLVTFVGGDAFADQVSTATEGFLPD 72
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + I + + G I + + S L + + Y S++
Sbjct: 73 SGQLLIENAIED--SPASAGSTIIGLVVLLWGSLKIFRGLDTAFSEIYGTTNENSFFDQ- 129
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ L ++ + +F A+ A+ + P LG + + L I
Sbjct: 130 ----IHDALIVFGVIGGALIFAAVATAIVALLPEIPFLG-------VAQSILLFVVLAIA 178
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ + P S ++PGV+ + W + LF Y+ F++ S L +I+ L
Sbjct: 179 FFPMYYYFPDVGSSKRQVIPGVVVAALGWTLLQSLFRVYVS-FASSSESAGPLGAILLLL 237
Query: 253 VFLYMLGVFFILGAELNA 270
+LY G+ ++GA +NA
Sbjct: 238 TWLYFGGMILLVGAVINA 255
>gi|154496145|ref|ZP_02034841.1| hypothetical protein BACCAP_00429 [Bacteroides capillosus ATCC
29799]
gi|150274700|gb|EDN01764.1| hypothetical protein BACCAP_00429 [Bacteroides capillosus ATCC
29799]
Length = 295
Score = 122 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 104/274 (37%), Gaps = 11/274 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + ++ + ++ A+ ++ +L+ FP ++ G L ++ +
Sbjct: 12 RFIREMVDMYFSKNVSRSAAELAYFLILTFFPVLICVNGFVGLLKLDPV--ALLSGIEEF 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW- 128
P + + + + + + A + +S AL ++ Y E R++
Sbjct: 70 LPRGTLDVVAEYVGYISTNQSTAMLVAGLSATLFSASAAFRALMNIMSDIY---ERRTYT 126
Query: 129 -YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-RIYATM 186
S + +L VT+ + V V V FF L W R
Sbjct: 127 GIFQITASVLFSVLFLVTIYLSLVVVVTGSWLFDLVEDFFHLNPGDLPWDWQWLRFPILF 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ V+ +L G I + V ++LF+ +I S YS +Y L
Sbjct: 187 CLVLLFVLLVYRMSAPRGKPRPPLLTGAILASAALVASSILFSWFIGLSSRYSLVYGSLT 246
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S++ L++LY+ G ILG N ++Y RKK
Sbjct: 247 SVVILLLWLYLCGNILILGNVFNC---VWYRRKK 277
>gi|300784486|ref|YP_003764777.1| ribonuclease BN [Amycolatopsis mediterranei U32]
gi|299794000|gb|ADJ44375.1| ribonuclease BN [Amycolatopsis mediterranei U32]
Length = 384
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 108/281 (38%), Gaps = 13/281 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDV 65
+ ++ E + ++ A+ + LS+ P ++ GF+G V V D
Sbjct: 18 WRLVTRTFAKAWEGNIFSEAAEAAFWQTLSLPPLLLGLLGSLGFVGEWFGQDVVAAVHDR 77
Query: 66 VFGA-----WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ G + I + +L V + ++ L + + S+ + + ++ A+
Sbjct: 78 IIGFCRTVFSANAVHDIIEPTVNSILTVGKGEIVSVGFLISLWAGSSAMSSFVDAITVAH 137
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+R+ R+ + L V LV+ + P + +FFP + W
Sbjct: 138 DQYGVRNDVWQRIFALLLYLCGLVILVVGLPLLAIGP---DLLPEFFPTAWRPTVTSWVS 194
Query: 181 RIYATML--ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+Y L + + L ++ K LPG + + +++ +V Y+ +
Sbjct: 195 ALYFPALGAMITLALTTLYKLALPRKLPWHRGLPGAVLAMVVFLLSSVGLRVYLNWITKT 254
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+ ++ +G+ + GA N+++ + K
Sbjct: 255 GYTYGALAAPIAFLLLMFFIGLAVVGGAYFNSAIQELWPAK 295
>gi|307727222|ref|YP_003910435.1| ribonuclease BN [Burkholderia sp. CCGE1003]
gi|307587747|gb|ADN61144.1| ribonuclease BN [Burkholderia sp. CCGE1003]
Length = 443
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A++ F E AMA+ I+ A S+ P +V +AG F GA + D + G +
Sbjct: 25 ALKQFSENRCTAMAASIAFYAAFSLAPTLVMVIAVAGWFFGAEAARGELFDHIHGLLGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS---- 127
A + + + G IS A +S +L +LN + R+
Sbjct: 85 AAAGVQTIVENAHHSGSAGGVAAIISFTMLAIGASATFSSLNSALNVVWPYTGPRTSSVI 144
Query: 128 -WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RLISFG VL + L++ + + ++ K+ ++I ++ +
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVL----DTVITFIGKWLWGDSPYVVIGNLLQLGVGL 200
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L + FLP AK + L G + + G LF Y+ + ++ +
Sbjct: 201 LVLAFAFAGLLKFLPDAKVRWRDALVGGAVAAVLFSAGKKLFALYLAH-AGMASSFGAAG 259
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S+ L++LY +LGAE +A+
Sbjct: 260 SLAVLLMWLYFSAAVLLLGAEFSAA 284
>gi|149926263|ref|ZP_01914525.1| putative ribonuclease bn transmembrane protein [Limnobacter sp.
MED105]
gi|149825081|gb|EDM84293.1| putative ribonuclease bn transmembrane protein [Limnobacter sp.
MED105]
Length = 455
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 104/262 (39%), Gaps = 9/262 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
+ E+ +A+ ++ + +LS+ P + + + + ++ +PE +
Sbjct: 64 QRISEQRLPQVAASLTFTTVLSLVPLATVVLAIFTAFPMFDRLQSSLQGYLIDSFFPETL 123
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ I + Q + AKGL I + + + + N+ + V RS
Sbjct: 124 SETILTYVTQ-FSDKAKGLTAIGIVFLVITALTTMFTVDRVFNQIWNVKRQRS------T 176
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
VL +V + + ++I ++ A + + + +L ++ + +
Sbjct: 177 MNKVVLYWAVLSLAPVLIGLSISVSTALIGETMAGVNPVLGGMFPALNLIPLTLTVLAFA 236
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F++ +P L G + + + + F YI F +Y+ +Y LA+ L++
Sbjct: 237 FIYRIVPNRAVHWKDALVGGVLAAVLFEISKRAFAAYITHFPSYTALYGALAAFPIFLLW 296
Query: 255 LYMLGVFFILGAELNASMIIYY 276
+Y+ + +LGA A++ +
Sbjct: 297 IYVSWIIVLLGASTVAALPVAR 318
>gi|77919575|ref|YP_357390.1| hypothetical protein Pcar_1979 [Pelobacter carbinolicus DSM 2380]
gi|77545658|gb|ABA89220.1| tRNA-processing RNAse BN [Pelobacter carbinolicus DSM 2380]
Length = 479
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 55/287 (19%), Positives = 117/287 (40%), Gaps = 14/287 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + + FV + AS ++ + LLS+ P + +L G +
Sbjct: 53 RLFLMRQLQVATIVVRGFVSDGCMLRASALTYATLLSIVPLLALMFSLIKGFGGQNVLEP 112
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ +F + I I + + +A + + S N +
Sbjct: 113 LLFKIFTHGSGEVVGAILSYIENTNFRRLGTVGLVILVATVLTL---LSNIEKSFNHIWG 169
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWN 179
V E RS R + V+L S L++ + V++ +G LL+++N
Sbjct: 170 VKETRS-LTRRFADYFSVVLLSPLLIVAALSLTTTLRNQVLVQRLLETAVIGEALLLLFN 228
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
LA++ F++LF+P + ++ L G +F W + + ++ + S Y+
Sbjct: 229 ---VLPYLAVWAAFTFMYLFMPNTRVQLGPALVGGVFGGTLWQLAQWAYVNFQIGVSKYN 285
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL-----NASMIIYYWRKKP 281
+Y +A++ +V+LY+ + +LG EL NA+++ + ++P
Sbjct: 286 AIYGTMAALPILIVWLYVSWMIVLLGLELTYAMQNATILREEYSEEP 332
>gi|322436384|ref|YP_004218596.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
gi|321164111|gb|ADW69816.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
Length = 305
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 109/275 (39%), Gaps = 6/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVV 66
+ +I A+ + D + + SA++S+FP ++ A + L + + + D
Sbjct: 18 IPGMIQRALFDALAHDCLNLGQSAAYSAMVSLFPAMIVTAAIIALLPDTAPLRSQVGDFF 77
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + +T + + ++A + +S+ + L + RA +
Sbjct: 78 DQVLPADVLPLLTSYFVASPGASPHTIRALILAAFVSFTGASSVIATLMEGIARANGLPR 137
Query: 125 M-RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-PALGNLLLIIWNGRI 182
++ R+ +F V ++ + LV+ + + V ++ P + I
Sbjct: 138 DCWTFGQRRMRAFLLVPISLIPLVLATILVVFGQFFSIWLALHLAPFIRPTFYAIALAVR 197
Query: 183 YATMLALFIGL-IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ LA +GL ++ K LPG I W V + F Y+ F+ Y +
Sbjct: 198 WIVSLAGVVGLTALIYHLGTPLKQHWRRTLPGAIAATAIWFVSTLAFGWYVTRFANYGQV 257
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L + + L +LY++ + ++GAE N+ ++
Sbjct: 258 YGSLGAGIALLFWLYIVFLSVLVGAEFNSHFYQHF 292
>gi|299530470|ref|ZP_07043890.1| putative ribonuclease BN [Comamonas testosteroni S44]
gi|298721446|gb|EFI62383.1| putative ribonuclease BN [Comamonas testosteroni S44]
Length = 599
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 103/262 (39%), Gaps = 13/262 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPE 72
+ F E+ AS ++ ++LL++ PF L V++ ++ PE
Sbjct: 206 LLARFKEDRLGVTASSLTFTSLLALVPFFTVALALFTAFPIFGKAQKVLERWLMDSLIPE 265
Query: 73 VIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
IA+ + + Q + ++ GL S L + + + +LN +RV ++R
Sbjct: 266 TIARQVLGYLTQFASKASQLGLVGFSIL--MVTAIALILTIDRTLNNIWRVRQLRPLGQR 323
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-YATMLALF 190
VL+ + + + + +YV + N L + L
Sbjct: 324 -------VLIYWAAITLGPLLLGLSLVLSSYVMSASKGMVNALPGSLRFVFDSIEFVVLA 376
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
G+ ++ ++P + L G +F + V + Y+ + TYS +Y A++
Sbjct: 377 AGMAGLYHYVPNTPVRWRHALVGGVFVAVFMEVAKKVLGLYLSSVPTYSVIYGAFATLPI 436
Query: 251 CLVFLYMLGVFFILGAELNASM 272
L+++Y+ +LGA + A +
Sbjct: 437 LLIWMYVAWSIVLLGALVTAYL 458
>gi|221066065|ref|ZP_03542170.1| ribonuclease BN [Comamonas testosteroni KF-1]
gi|220711088|gb|EED66456.1| ribonuclease BN [Comamonas testosteroni KF-1]
Length = 590
Score = 121 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 103/262 (39%), Gaps = 13/262 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPE 72
+ F E+ AS ++ ++LL++ PF L V++ ++ PE
Sbjct: 197 LLARFKEDRLGVTASSLTFTSLLALVPFFTVALALFTAFPIFGKAQKVLERWLMDSLIPE 256
Query: 73 VIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
IA+ + + Q + ++ GL S L + + + +LN +RV ++R
Sbjct: 257 TIARQVLGYLTQFASKASQLGLVGFSIL--MVTAIALILTIDRTLNNIWRVRQLRPLGQR 314
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-YATMLALF 190
VL+ + + + + +YV L N L + L
Sbjct: 315 -------VLIYWAAITLGPLLLGLSLVLSSYVMSASKGLVNALPGSLRFVFDSIEFVVLA 367
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
G+ ++ ++P + L G +F + V + Y+ + TYS +Y A++
Sbjct: 368 AGMAGLYHYVPNTPVRWRHALVGGVFVAVFMEVAKKVLGLYLSSVPTYSVIYGAFATLPI 427
Query: 251 CLVFLYMLGVFFILGAELNASM 272
L+++Y+ +LGA + A +
Sbjct: 428 LLIWMYVAWSIVLLGALVTAYL 449
>gi|289642410|ref|ZP_06474556.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
gi|289507755|gb|EFD28708.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
Length = 299
Score = 121 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 4/230 (1%)
Query: 54 GAHQFVPTVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
++++ P V+ + I ++L + +I L + + S+ +
Sbjct: 56 AVDSVRQSLLNTANDLLTPSVVDDVVRPTINEILTHGRPDVISIGFLLSLWTGSSAMATY 115
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP-LALAYVRKFFPALG 171
++ AY +RS +RL++ L V+ VI+ V P L + L
Sbjct: 116 VNTITIAYGQRRLRSAVRSRLLALRLYLAQVVSGVILLPALVLGPDLISELLDADRHHLV 175
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ LL + + A + + ++ HL LP+ + LPG + + W VG+ L Y
Sbjct: 176 DWLLTVLFWPVVALLSLTMLTSLY-HLSLPSRR-PWRRALPGALLAMVVWNVGSYLLRLY 233
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ T + +Y +A+ + L+F Y+ + +LGAELNA++ + P
Sbjct: 234 LGTVIDHELIYGSVAAPVAALLFFYITALAVLLGAELNAAIDEHSGHTPP 283
>gi|239994832|ref|ZP_04715356.1| ribonuclease BN [Alteromonas macleodii ATCC 27126]
Length = 294
Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 109/274 (39%), Gaps = 8/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VV 66
V D+ I+ E++ A H++ LLS+ PFI+ + A V + ++ V
Sbjct: 17 VRDLFSIFIKRCREDNITISAGHLAYVTLLSLVPFIMVTFTIMSAFPAFASVRSKLEHFV 76
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + + + + + ++ + I L+ + + + +LNR +R R
Sbjct: 77 FSNFVPTASDVVHKYMTDFVGNASQ-MSAIGILSLLVVALMLISNVDKTLNRIWRTQSDR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
T I + + L + + V + A+ ++ P LG LL +
Sbjct: 136 PIVYTFAIYWMVITLGPMLIGSSVVVSSYLTGLAAFTEEYTPGLGTFLLSL------VPS 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A + +++ +P + L G I I++ + F Y+ F +Y +Y LA
Sbjct: 190 GAAMLAFTILYMVVPNRRVFARHALVGAIVATIAFEITKSGFALYVTNFPSYELIYGALA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++Y+ + + GAE S+ + +K
Sbjct: 250 VVPILFLWVYLSWIIVLFGAEFTCSLGEAFENRK 283
>gi|332142905|ref|YP_004428643.1| hypothetical protein MADE_1017605 [Alteromonas macleodii str. 'Deep
ecotype']
gi|332143050|ref|YP_004428788.1| hypothetical protein MADE_1018330 [Alteromonas macleodii str. 'Deep
ecotype']
gi|288559237|sp|B4RYA6|Y3526_ALTMD RecName: Full=UPF0761 membrane protein MADE_03526
gi|327552927|gb|AEA99645.1| hypothetical protein MADE_1017605 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327553072|gb|AEA99790.1| hypothetical protein MADE_1018330 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 294
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 108/274 (39%), Gaps = 8/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VV 66
+ D+ I+ E++ A H++ LLS+ PFI+ + A V + ++ V
Sbjct: 17 LRDLFGIFIKRCKEDNITISAGHLAYVTLLSLVPFIMVTFTIMSAFPAFASVRSKLEHFV 76
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + + + + + ++ + I L+ + + + +LNR +R R
Sbjct: 77 FSNFVPTASDVVHKYMTDFVGNASQ-MSAIGILSLLVVALMLISNVDKTLNRIWRTQSDR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
T I + + L + + V + A+ ++ P LG LL +
Sbjct: 136 PIVYTFAIYWMVITLGPMLIGSSVVVSSYLTGLAAFTEEYTPGLGTFLLSL------VPS 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A + +++ +P + G I I++ + F Y+ F +Y +Y LA
Sbjct: 190 GAALLAFAILYMVVPNRRVYARHAFVGAIVATIAFEITKSGFALYVTNFPSYELIYGALA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++Y+ + + GAE S+ + KK
Sbjct: 250 VVPILFLWVYLSWIIVLFGAEFTCSLGEAFENKK 283
>gi|134293178|ref|YP_001116914.1| putative ribonuclease BN [Burkholderia vietnamiensis G4]
gi|134136335|gb|ABO57449.1| putative ribonuclease BN [Burkholderia vietnamiensis G4]
Length = 329
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 108/276 (39%), Gaps = 13/276 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
+A + F + AMA+ I+ + S+ P +V +AG F G V + +
Sbjct: 41 NAFKRFSSDRCSAMAASIAFFSAFSLAPTLVMVIAVAGWFFGDDAARGQVFEQAHQLIGD 100
Query: 73 VIAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR---- 126
A I + A + G+ T+ + AA +S +L +L+ + E R
Sbjct: 101 DAAASIQTIVQNAHRAGSSGGIATLISFAALAIGASATFASLNTALSVIWPSTENRWSSM 160
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RL+SFG VL + L++ + A+ +V + + I + +
Sbjct: 161 LGLVRVRLVSFGLVLGVAFLLIVSLVL----DTAITFVGTWLLGDSPYVFITNVLQFFVG 216
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G + + I + G LF Y+ T ++ +
Sbjct: 217 IAVLAGAFAALMKFLPDARVAWRDAMVGGVVSAILFSGGKKLFALYLARAGT-ASAFGAA 275
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S L++LY +LGAE A+ + R P
Sbjct: 276 GSFAVLLMWLYFSAAVLLLGAEFAAARGDAHRRGDP 311
>gi|227499889|ref|ZP_03929982.1| ribonuclease [Anaerococcus tetradius ATCC 35098]
gi|227217998|gb|EEI83271.1| ribonuclease [Anaerococcus tetradius ATCC 35098]
Length = 320
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/297 (16%), Positives = 115/297 (38%), Gaps = 20/297 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + + V+ D ++ +S L + P ++ ++ + +
Sbjct: 1 MKIKKPKTKRFLLNLLNRVVKHDIMTYSAALSFYLLQASIPLMMVLVSVLSYF--LEGKE 58
Query: 61 TVIDVVFGAWPEVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I + P+ K I + I + + + + + T++ A + +++GV L ++N A
Sbjct: 59 DLIINLLEFLPKTTNKLILEAIDILIASSQSPTVTTLTIFFALFSATSGVNKLINAINHA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF------------ 167
Y + + R++S + ++ LV + V +
Sbjct: 119 YGLKNNKQAIKQRIMSVLFTIIFISLLVFVLIFQVYNTSIIGIFNAQIIEKFTIHFNTNV 178
Query: 168 -PALGNLLLIIWNGR-IYATMLALFIGLIFVHLFLPAA---KSKIMSILPGVIFTWISWV 222
L + I+ I L + + + F + + P+ + + G +F I+
Sbjct: 179 QKGLDMISSPIFKLTSIAIPFLIMAVAVGFFYRYSPSNASNRISVKEAFCGGLFATIASF 238
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + +++++ FS S +Y LA I+ ++L M+ ILGAE A+ Y
Sbjct: 239 IASFIYSYFTNNFSNQSLVYGALAGILALFIWLLMISTILILGAECIAAYREGYKED 295
>gi|323528502|ref|YP_004230654.1| ribonuclease BN [Burkholderia sp. CCGE1001]
gi|323385504|gb|ADX57594.1| ribonuclease BN [Burkholderia sp. CCGE1001]
Length = 443
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A+ F ++ AMA+ I+ A S+ P +V +AG F GA + D + G +
Sbjct: 25 ALRKFSDDRCSAMAASIAFYAAFSLAPTLVMVIAVAGWFFGAEAARGELFDHIHGLLGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS---- 127
A + + + G IS A +S +L +LN + R+
Sbjct: 85 AAAGVQTIVENAHHSGSAGGIAAIISFTMLAIGASATFSSLNSALNVVWPYSGPRTSSVI 144
Query: 128 -WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RLISFG VL + L++ + + ++ K+ ++I ++ +
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVL----DTVITFIGKWLWGDSPYVVIGNLLQLGVGL 200
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L + FLP A + L G + + + G LF Y+ + ++ +
Sbjct: 201 LVLAFAFAGLLKFLPDASVRWRDALVGGVVAAVLFSAGKKLFALYLAH-AGMASSFGAAG 259
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S+ L++LY +LGAE +A+
Sbjct: 260 SLAVLLMWLYFSAAVLLLGAEFSAA 284
>gi|212633182|ref|YP_002309707.1| ribonuclease BN [Shewanella piezotolerans WP3]
gi|212554666|gb|ACJ27120.1| Ribonuclease BN [Shewanella piezotolerans WP3]
Length = 308
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/280 (18%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID- 64
++ + F E+ A H++ LLS+ P + ++ + ++
Sbjct: 2 WSIWAFFLHLLRRFKEDQVNIKAGHLAYVTLLSLVPIVAVMFSMLSAFPVFAGIRGQLEG 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
V+ + + I + +A +KG T+ A + + A+ SLN +R E
Sbjct: 62 FVYDNFLPAAGDTVQIYINEFVANASKG-TTVGIAALVVVALMLISAIDKSLNSIWRTKE 120
Query: 125 MR----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R S+ + ++ +L +LV S++ + + P + L
Sbjct: 121 KRQVAVSFSMYWMVLTLGPVLVGASLVATSYLVSLKLFNDSELSGVVPLIIERL------ 174
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
M+ + +++ +P K K L G I + + +G F Y+ F +Y
Sbjct: 175 ----PMMFSVAAFLLLYMVVPNKKVKFFHALLGAIVAAMLFELGKKGFAFYVTQFPSYEA 230
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y+ + ++GAE+ A+M Y ++
Sbjct: 231 IYGALAVIPILFVWVYVSWIIVLVGAEITAAMPEYLRERQ 270
>gi|332638721|ref|ZP_08417584.1| hypothetical protein WcibK1_08523 [Weissella cibaria KACC 11862]
Length = 296
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 8/278 (2%)
Query: 1 MREYFCIVF--DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M E +F +I I+ + D +S I+ LLS+FP I+ A L + G
Sbjct: 1 MSEIIKRIFNNRVIKTIIDVSMRVDIVTASSSIAYFGLLSIFPAIIIIATLLPYFGL--T 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ T + V A P + I +L G+ + S + + S V ++R + N
Sbjct: 59 ISTALSYVQMAVPTSVYDFARPIIESILGQKGVGVLSASIIITLWSLSRVVASIRTAQNG 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y V I R IS +++L + I+ + L + P NL+ I
Sbjct: 119 IYGVQPKTIAIIDRFISMAWMILVLGIMGILLIIASVGSNILEAL----PISANLVQQIE 174
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + LFIG + LP K ++ L G I + A +F Y+ S
Sbjct: 175 SAKSPVVIGGLFIGASLFNWVLPVKKPRLQWALVGTIVQVAIVIWLAKIFGWYVSLASQA 234
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
T Y L+S + L+++ + + ++G + A++ +
Sbjct: 235 YTFYQALSSAIILLLWINFIALAALIGTIVTATLEELF 272
>gi|313892387|ref|ZP_07825979.1| YihY family protein [Dialister microaerophilus UPII 345-E]
gi|313119246|gb|EFR42446.1| YihY family protein [Dialister microaerophilus UPII 345-E]
Length = 281
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/258 (18%), Positives = 107/258 (41%), Gaps = 4/258 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I ++ F+++D A A+ + +L + PF+VF N F A Q VI P
Sbjct: 14 IKHMVKRFIKDDVTAFAAESTYYFILGLVPFLVFFTNAILFFAAPQI--QVIIKFLHYLP 71
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEMRSWYI 130
+ + + + I +++ + I A + SS G+ + ++++ + + +++W
Sbjct: 72 QQLEVSMAENIYRIIQGRSTVWLAIGLFGALWTSSQGINVIIRAMDKIFFKNRNIQNWIT 131
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ S + LL + +L++ + V + + +F L I + + +
Sbjct: 132 VSIKSLLFTLLITFSLILSLGMIVFANALIYVIAYYFGIPEMFLEIWNIAKYAIPFIMMI 191
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L + F PA K + IL +F ++ ++ +YI+ S Y L ++
Sbjct: 192 FSLAAFYRFAPAKKCATWPVILVTSLFVTGILLLLTGIYGYYILEISKMGATYGSLIGLV 251
Query: 250 TCLVFLYMLGVFFILGAE 267
++ + + + G+E
Sbjct: 252 VLFIWFRLASMVILTGSE 269
>gi|24375881|ref|NP_719924.1| ribonuclease BN [Shewanella oneidensis MR-1]
gi|32699638|sp|Q8E985|Y4401_SHEON RecName: Full=UPF0761 membrane protein SO_4401
gi|24350851|gb|AAN57368.1|AE015873_11 ribonuclease BN [Shewanella oneidensis MR-1]
Length = 295
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 111/269 (41%), Gaps = 8/269 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VV 66
++ + + VE+ A H++ LLS+ P + ++ + + I+ V
Sbjct: 17 IWHFLLHLRQRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIRGQIEAFV 76
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + + I + + +KG + A + + A+ SLN +R E R
Sbjct: 77 YENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNIWRTKEKR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S + + Y ++ ++ V++ VA ++ AL ++ + +
Sbjct: 136 SVVVAFSM---YWMVITLGPVLVGASLVATSYVVSLKLFEGDALSGMMPLFIER---LPL 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + +++ +P K K L G + + + +G F Y+ F +Y +Y LA
Sbjct: 190 LFSVAAFLLLYMVVPNQKVKFWHALLGAVVAALLFELGKKGFAFYVTKFPSYEAIYGALA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
+I V++Y+ + +LGAE+ A+M Y
Sbjct: 250 TIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|297587799|ref|ZP_06946443.1| YihY family protein [Finegoldia magna ATCC 53516]
gi|297574488|gb|EFH93208.1| YihY family protein [Finegoldia magna ATCC 53516]
Length = 285
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/264 (16%), Positives = 107/264 (40%), Gaps = 8/264 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ E+ +++ + ++S+ PF++ N+ + A + +I
Sbjct: 13 FFKKLLQSIKEDQIPLLSAQTTYHFIMSLVPFLIVLLNIVLMVAASKL--DLIFKWMEVI 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + I +++ + + +IS L A + SS +++L ++N+A+ V +
Sbjct: 71 PSETRNILMTLINTIISNRSSSVLSISLLVALWSSSKALKSLIKAMNKAFDVRSENGFLK 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
T+L S + ++ + L++ L L + ++ + R ++++
Sbjct: 131 TQLKSILFTVVLLLLLMVTLVFIAFGGLILNLIEQYMKIRIPYFAQFF--RYLIPIVSMI 188
Query: 191 IGLIFVHLFLPA----AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
G ++ F P K S + G I W++ +L++ Y+ S S Y L
Sbjct: 189 FGFTLLYKFAPDFDSTRSIKWKSAMLGGTIATIGWLLITLLYSFYVSNISNMSLTYGPLV 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+ V++ + ++ AE+ A
Sbjct: 249 GVFALFVWINLSSQIILISAEITA 272
>gi|289207949|ref|YP_003460015.1| ribonuclease BN [Thioalkalivibrio sp. K90mix]
gi|288943580|gb|ADC71279.1| ribonuclease BN [Thioalkalivibrio sp. K90mix]
Length = 452
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 95/252 (37%), Gaps = 2/252 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ E A + + LLS+ P I ++ GAH V V+ E
Sbjct: 46 IMHEAKEGQLTLRAMSLVYTTLLSIVPLIALSFSVLKAFGAHNAVEPVVLGFLEPLGEQG 105
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I V + L + L Y V+ + ++ N +RV R++
Sbjct: 106 VEIANNVIEFVDNMRVGVLGFVGLLFLVYTVIALVQKIELAFNTIWRVENSRNFAQR--F 163
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
S ++ L+++S + + + + + +I L +
Sbjct: 164 SNYLSVILIGPLLVVSALGITATVMSTTAMQTLAGIEPFGTLITGASRMVPYLLIMAAFT 223
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F+++F+P + ++ L G + + W F + + Y +Y+G A ++ L++
Sbjct: 224 FIYVFVPNTRVRLFPALVGAVVAGLLWQSVGWGFATMVAGSTRYDAIYSGFAIMILLLIW 283
Query: 255 LYMLGVFFILGA 266
+Y+ + ++GA
Sbjct: 284 IYLAWLILLIGA 295
>gi|196231818|ref|ZP_03130674.1| ribonuclease BN [Chthoniobacter flavus Ellin428]
gi|196223940|gb|EDY18454.1| ribonuclease BN [Chthoniobacter flavus Ellin428]
Length = 311
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 108/272 (39%), Gaps = 13/272 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT--VIDVVF 67
I++ A+ + E DG A+ + A ++FP IV ++ ++ V T ++ +
Sbjct: 24 HILWRAVVKYDETDGEQRAASFAYYAFFAMFPLIVLLVTISTNFFGNRAVATDRIMSYIA 83
Query: 68 GAWPEVI--AKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P +K I I V+ + + G+ LA + + +AL +NRA+ +
Sbjct: 84 PYMPLDTKDSKMIVTTIDGVVQSRKSAGIIAFGILA--WSALKFFQALVHGVNRAWGTKQ 141
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY-----VRKFFPALGNLLLIIWN 179
SW+ + + + + L++ + + + L
Sbjct: 142 Y-SWWRMPIKNLAMTAILASALLLGTIIPAIFKYVEYFYWTHSWEVHLDFWFVKPLFDNV 200
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ LF G + + F P ++ + + P +F ++ + LF Y ++
Sbjct: 201 LYPLVPLVVLFYGFVMFYKFAPRRRTLLREVWPAALFVTLALEILQRLFILYTRNIGHFN 260
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y +++ L+++Y+ G I+G L A+
Sbjct: 261 ALYGTFGTVVALLLWIYLSGSIIIMGGCLCAA 292
>gi|93005366|ref|YP_579803.1| ribonuclease BN, putative [Psychrobacter cryohalolentis K5]
gi|92393044|gb|ABE74319.1| ribonuclease BN, putative [Psychrobacter cryohalolentis K5]
Length = 525
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 113/272 (41%), Gaps = 6/272 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVF 67
F + HF E++ A+ ++ + LLS+ P + + + + +V++
Sbjct: 19 FQFLRFLTRHFFEDNCQQKAASLTYTTLLSIVPILTVLLMILSSVPALASVRAQIYEVIY 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ ++ I A + L I A+ + + + + + N+ +RV E RS
Sbjct: 79 SNLLPQSSLQVSKYINN-FAEKSSNLTIIGAMFLLFTTIMTLTTIERAFNQIWRV-EDRS 136
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ ++ + ++ ++ +F+ + +L+ + + G ++
Sbjct: 137 GGMRSMLRYWTIVTLGPLVLGTAFIASSAVQSLSLLNRQIGGYGIDWSF---WVQIVSIA 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
G I ++ F+P A+ + +F I + + LF + F++Y +Y A+
Sbjct: 194 VTIAGFISMYWFIPKARVPAKNAAIAGVFVAIVFELMKHLFGTVMANFTSYEAIYGAFAA 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L+++Y+ +LG E++ ++ I+ ++
Sbjct: 254 LPIFLLWIYLSWNLILLGVEISYTLTIFETKE 285
>gi|297561757|ref|YP_003680731.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296846205|gb|ADH68225.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 336
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 104/273 (38%), Gaps = 16/273 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG-- 68
++ + F + +A+ + L+S+ P ++ G A ++ +
Sbjct: 28 LVLRTVRAFARDRVVGLAAESAFFTLISL-PALMLGLLGALGPLTVVLGEDFVEEIRLWI 86
Query: 69 -------AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
P+ + + + L G+ +++ L + + S + S+ +Y
Sbjct: 87 LDLTARVLTPDTVDSVVEPLVDDFLGGVPGGVLSVTFLVSLWSGSRAMNVFIRSITISYG 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ E+R W R+++F L + +++ V VA P + + L + +
Sbjct: 147 LDELRGWVRQRVLAFVAYLGGLLFAILLLPVLVAGPDLVNRL------LPMTVGRLNLFY 200
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + ++ ++ + LPG + + + G+V Y+ T+
Sbjct: 201 WPTVALLAVAAVTLLYALSVPVRTPLWRHLPGALLAALVLITGSVALRVYLDASFGQVTI 260
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y LA+ + L +L+++ + ++G+ NA +
Sbjct: 261 YGSLAAPIAILAWLFVMAIAVLVGSSFNAEIDA 293
>gi|297203233|ref|ZP_06920630.1| ribonuclease BN [Streptomyces sviceus ATCC 29083]
gi|197711317|gb|EDY55351.1| ribonuclease BN [Streptomyces sviceus ATCC 29083]
Length = 347
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 108/272 (39%), Gaps = 14/272 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-------GAHQFVPTVI 63
++ D + +E +A+ + +LLSV P ++ L G++ ++
Sbjct: 1 MLKDTVNSCIEYRILGLAAEAAFFSLLSVPPLLLSLIGLLGYVDDWTGTDSISSLEANLL 60
Query: 64 DVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
D + + + + V+ + ++ L A + S V ++ Y +
Sbjct: 61 DAARTVLSDKGVREIAQPILDDVMKGGRPDVISVGFLFALWSGSRAVNVFIDTITVMYGL 120
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+R TRL++F + A + + + VA P A+ + + ++
Sbjct: 121 DGVRGIVKTRLVAFALFVAALLIGSVALPLMVAGPDAVVRIVPWS------TTVVQVLYW 174
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ L ++ +S + +PG + WV+G+ L Y+ + +T+Y
Sbjct: 175 PVVIILSIAFLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRIYLQSTIEGATIY 234
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA+ + L+++ + ++GA +NA++
Sbjct: 235 GSLAAAVAVLLWIGVSAFAVLVGAAMNAAIDR 266
>gi|220907293|ref|YP_002482604.1| ribonuclease BN [Cyanothece sp. PCC 7425]
gi|219863904|gb|ACL44243.1| ribonuclease BN [Cyanothece sp. PCC 7425]
Length = 306
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 101/277 (36%), Gaps = 12/277 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
++ + + E+ +A+ ++ + S+ P ++ +AG G +I +
Sbjct: 7 LRLLKETFAEWNEDQVPLLAAALAYYTVFSLAPLLLIAIAIAGAVFGEQAARGEIIGQIQ 66
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A+ I + + G + +S L+ +LN + V
Sbjct: 67 SLVGSQGAEAIQTMLQNAQKPESGGNWATIFGVITLLLGASGVFGQLQQALNTIWEVKPK 126
Query: 126 -----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RS+ +R +SF VL+ L++ + A+ + P +L+
Sbjct: 127 PGQGLRSFLQSRFLSFAMVLVMGFLLLVSLVLTAALAAIGHFFGNLIPG---FMLLWQTL 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ + + ++ LP K ++ G T + + +G L Y+ + S ++
Sbjct: 184 NFVISLVVITVLFAAIYKVLPDVKVPWKNLWVGAGVTALLFSLGRFLIGLYLGS-SGVTS 242
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y S++ L++++ + GAE Y
Sbjct: 243 TYGAAGSLVVILIWVFYSAQIILFGAEFTQVYSKYRG 279
>gi|170692953|ref|ZP_02884114.1| ribonuclease BN [Burkholderia graminis C4D1M]
gi|170141951|gb|EDT10118.1| ribonuclease BN [Burkholderia graminis C4D1M]
Length = 432
Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A++ F E+ A+A+ I+ A S+ P +V +AG F GA + D + G +
Sbjct: 25 ALKQFSEDRCTALAASIAFYAAFSLAPTLVMVIAVAGWFFGAEAARGELFDHIHGLLGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS---- 127
A + + + G IS A +S +L +LN + R+
Sbjct: 85 AAAGVQTIVENAHHSGSAGGVAAIISFTMLAIGASATFSSLNSALNVVWPYTGPRTSSVL 144
Query: 128 -WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RLISFG VL + L++ + + YV K+ ++I ++ +
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVL----DTVITYVGKWLWGDSPYVVIGNLLQLGVGL 200
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L + FLP A + L G + + + G LF Y+ + ++ +
Sbjct: 201 LVLAFAFAGLLKFLPDASVRWRDALVGGVVAAVLFSAGKKLFALYLAH-AGMASSFGAAG 259
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S+ L++LY +LGAE +A+
Sbjct: 260 SLAVLLMWLYFSAAVLLLGAEFSAA 284
>gi|114777916|ref|ZP_01452830.1| hypothetical protein SPV1_05824 [Mariprofundus ferrooxydans PV-1]
gi|114551703|gb|EAU54255.1| hypothetical protein SPV1_05824 [Mariprofundus ferrooxydans PV-1]
Length = 433
Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 105/263 (39%), Gaps = 7/263 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DV 65
+ Y E F+ + AS ++ ++LL++ P + G ++ A + + D
Sbjct: 18 HLLRFSYRVAERFIVDKCIQRASALAYASLLAIVPMVALGFSIFTSFQAFDAISGHVRDA 77
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ G + + + + V + L + ++ + + + N +R+
Sbjct: 78 LLGYLIPTSQQAVENYLGTV-TDKTTAISIFGVLGLLFTATALLNTVEEAFNTIWRITRA 136
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+W ++ I+F L + L+ S + A+ ++ G L I + +
Sbjct: 137 RAWL-SKFITFWATLTLTPILIGASLSITSYFAAMPLLQHVAEGAGYLSHIPFLLPWILS 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
LAL +++ LP + G + + + FT YI + Y +Y L
Sbjct: 196 SLALTT----LYVVLPNTTVPFRYAVVGGLVGGALFEWTKIGFTFYITEIADYEKLYGAL 251
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
+++ L++LY+ V +LG+E+
Sbjct: 252 STLPVFLIWLYLTWVVVLLGSEI 274
>gi|146283159|ref|YP_001173312.1| ribonuclease [Pseudomonas stutzeri A1501]
gi|145571364|gb|ABP80470.1| probable ribonuclease [Pseudomonas stutzeri A1501]
Length = 391
Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 100/265 (37%), Gaps = 11/265 (4%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV-VFGAWPEVIAKPI 78
+ + G A+ ++ + L +V P + + + A + V I +F + I
Sbjct: 1 MADQGPQSAAALTYTTLFAVVPMMTVTFAMLSAIPAFKGVGEQIQFYIFNNFIPSTGATI 60
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ +L + + L + + + + N +RV + R R +S
Sbjct: 61 QEYLLAFTSQARQ-LTWFGVGFLMATALMMLLTIEKAFNTIWRVRQPR-----RGVSSFL 114
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-IWNGRIYATMLALFIGLIFVH 197
+ A ++L + A Y+ G LI + +L ++
Sbjct: 115 LYWAILSL--GPLLLGAGFATSTYIASLSLISGPYALIGVGTLIKVMPLLLSVAAFTLIY 172
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+P + + L G +FT + + +F Y+ F +Y +Y A++ L+++Y+
Sbjct: 173 AAVPNTRVPLRHALVGGVFTAVLFEAAKQMFGVYVSYFPSYQLIYGAFAAVPLFLLWIYL 232
Query: 258 LGVFFILGAELNASM-IIYYWRKKP 281
+ + GAEL + WR++P
Sbjct: 233 SWMIVLFGAELVCGLSSSQQWRRRP 257
>gi|148262717|ref|YP_001229423.1| putative ribonuclease BN [Geobacter uraniireducens Rf4]
gi|146396217|gb|ABQ24850.1| tRNA-processing RNAse BN [Geobacter uraniireducens Rf4]
Length = 449
Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 106/267 (39%), Gaps = 5/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R Y I+ ++F++++ AS +S + +LS+ P L LG +
Sbjct: 31 RHYGVKYLQIMALVAKNFLDDNCMLRASALSFTTILSIVPLFALTFALLKGLGVQNKLEP 90
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+I A + I I + ++ + + + + N +
Sbjct: 91 LILEQVTAGSHELVDKIVTYINNTNMTSMGAIGLVTLIVTVITL---LGNIEKAFNVVWG 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS Y R S +L S L++++ + + L + K+ + ++
Sbjct: 148 VRETRSPY--RKFSDYLSVLVSGPLLMLAAISITTSLQSQAMVKWLVETAYIGDLMLLFF 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++++ + F+++F+P K + S + G + W + + H+ V + Y+ +
Sbjct: 206 RLIPYFSIWLAMFFLYIFIPNTKVRFKSAIIGGVLAGTIWQIAQWGYIHFQVGVAKYNAI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y LA + +V++Y + + G E+
Sbjct: 266 YGTLALLPIFMVWIYTSWLIVLFGVEV 292
>gi|197116978|ref|YP_002137405.1| membrane-bound transcriptional regulator/ribonuclease BN-like
protein [Geobacter bemidjiensis Bem]
gi|197086338|gb|ACH37609.1| membrane-bound transcriptional regulator, ribonuclease BN-related
protein [Geobacter bemidjiensis Bem]
Length = 446
Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 108/270 (40%), Gaps = 5/270 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + +F+ + A+ +S + +LS+ P + ++ LGA +
Sbjct: 27 KGRMVRLLQFLSFTFSNFMANNSLLRATALSFTTVLSLVPLLALAFSVLKGLGAQNRLAP 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+I A E + + I + I A + + + + ++ + N +
Sbjct: 87 LILKEVTAGSEEVVNRVVSYIG---NTNMGSVGAIGLAALLFTAISMLGSIEEAFNVVWG 143
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS Y R S +L S L++++ + L ++ + L +
Sbjct: 144 VQETRSLY--RKFSDYLSVLISAPLLLLAATSITTTLQSKWLIGWLMERTYLGDLFLFML 201
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L++++ + ++ F+P + + S L G + W + H+ V Y+ +
Sbjct: 202 GLTPYLSVWVAIFLLYTFIPNTRVRYTSALIGAVLAGTLWQFAQWAYIHFQVGAGNYNAI 261
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y LA++ +V++Y+ + + G E+ A+
Sbjct: 262 YGTLAALPILMVWIYVSWIIVLFGMEVVAA 291
>gi|148360703|ref|YP_001251910.1| ribonuclease BN [Legionella pneumophila str. Corby]
gi|288559231|sp|A5IGR4|Y2650_LEGPC RecName: Full=UPF0761 membrane protein LPC_2650
gi|148282476|gb|ABQ56564.1| ribonuclease BN [Legionella pneumophila str. Corby]
gi|158512137|gb|ABW69098.1| ribonuclease BN [Legionella pneumophila]
Length = 412
Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 114/279 (40%), Gaps = 11/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVP 60
+ F + I+HF+++D +AS ++ ++LL+V P + G + Q
Sbjct: 8 KTKFYSCDRFVRFVIQHFIQDDCTYIASALAFTSLLAVVPLMSVGLAIFSSFPVFQGLAE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + +F + K + + Q + +K L + + + + + ++N+ +
Sbjct: 68 PVQNFIFDNFVPATGKIVQSYLQQFTSQVSK-LSIWGVVFLIFTALLVMFTIERAMNKIW 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV R L+ + + LA V L + + P +
Sbjct: 127 RVSSSRHGVSAFLLYWAIISLAPVLLGLSLAASSYLFSMPILADHRAP---------YTI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
Y+ IG F+++ +P KI G + I + F +Y++ ++TY
Sbjct: 178 LHYSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYEL 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 238 LYGAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|114319682|ref|YP_741365.1| putative ribonuclease BN [Alkalilimnicola ehrlichii MLHE-1]
gi|122312407|sp|Q0ABB2|Y521_ALHEH RecName: Full=UPF0761 membrane protein Mlg_0521
gi|114226076|gb|ABI55875.1| tRNA-processing RNAse BN [Alkalilimnicola ehrlichii MLHE-1]
Length = 445
Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 97/267 (36%), Gaps = 7/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEV 73
E F + A+ +S + LL++ P + G ++ ++D++F
Sbjct: 35 VAERFRRDACLQNAATLSYTTLLALVPLLTIGLSIFAAFPVFSGLTEQMLDLLFENLVPA 94
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + A GL + LA + + A+ ++N +RV + R R
Sbjct: 95 STAVVQQHLEDFVG-RAAGLTVVGLLALMVSALLMMAAIDRAMNDIWRVQQRR-----RP 148
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ V +TL + + F L L + +A +
Sbjct: 149 LHGFMVYWTVLTLAPILMGASLGISSYVISVTRFGELEALSGLQGLLLAGMPFVAETVAF 208
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
F++ +P + + L G + + F Y+ TY +Y LA++ L+
Sbjct: 209 TFLYAAVPNFRVPLRHALLGGLLAAALFEAAKGGFGWYVANIPTYEAIYGALAALPIFLI 268
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
+LY+ V ++GAE ++ Y +
Sbjct: 269 WLYLSWVVVLVGAEFTQALASYSVARH 295
>gi|296157058|ref|ZP_06839895.1| ribonuclease BN [Burkholderia sp. Ch1-1]
gi|295892944|gb|EFG72725.1| ribonuclease BN [Burkholderia sp. Ch1-1]
Length = 444
Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 17/267 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGAWPEV 73
A F E+ AMA+ I+ A S+ P +V +AG+ GA + D + G +
Sbjct: 25 AFRQFAEDRCAAMAASIAFYAAFSLAPTLVMVIAVAGWVFGAEAARGELFDHIHGLLGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG----LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
A + + + G + + S LA +S +L +LN + RS
Sbjct: 85 AAAGVQTIVENAHHNGSAGGIAAIISFSMLAI--GASATFSSLNSALNIVWPYTGPRSSS 142
Query: 128 ---WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RLISFG VL + L++ + + +V K+ ++I ++
Sbjct: 143 VIALVRVRLISFGLVLGVAFLLIVSLVL----DTIITFVGKWLWGDSPYVVIGNLLQLGV 198
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L L + FLP A+ + + G I + + G LF YI + ++ +
Sbjct: 199 GLLVLACAFAGLLKFLPDARVRWLDAFVGGIVAAVLFSAGKKLFALYIAH-AGMASSFGA 257
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
S+ L++LY +LGAE +A+
Sbjct: 258 AGSLAVLLMWLYFSAAVLLLGAEFSAA 284
>gi|261367968|ref|ZP_05980851.1| YihY family protein [Subdoligranulum variabile DSM 15176]
gi|282569951|gb|EFB75486.1| YihY family protein [Subdoligranulum variabile DSM 15176]
Length = 281
Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 10/279 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ ++I+ + F+ ++ A +L L + FP +++ L + + V
Sbjct: 1 MKQSMERAKEMIFAILGPFLGQNLPIFAGCATLFLLTASFPLLIWVLVLVNHMPDYS-VT 59
Query: 61 TVIDVVFGAWP--EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ ++++ P I + D + + A + + +A+ Y +S+G+ A++ L R
Sbjct: 60 DLAELMYQFLPQVPEIQDTVLDVLNNLSAQSTTFVASFAAITTLYSASSGMFAVQKGLQR 119
Query: 119 AYRVVEMRSWYITRLISFGYVLLA----SVTLVIMSFVFVAIPL-ALAYVRKFFPALGNL 173
R RL++ Y ++ L++ + PL AL + L
Sbjct: 120 L--TPGARFTLYDRLLAIVYTIVFEGLLLAVLLLQGLSSIFRPLSALLATNARWRWLIEW 177
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
N + LF+ ++ ++ F+P K + LPG IFT + W+V + +F+ YIV
Sbjct: 178 FRHWINFSDLIAIPVLFVLILLIYTFVPGGKRSLRGQLPGTIFTTVGWLVFSRIFSFYIV 237
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F S +Y L +I+ +++L ++ LGA LNA++
Sbjct: 238 HFWKLSYIYGSLTAIILMILWLDIIINLLFLGAALNAAL 276
>gi|134099502|ref|YP_001105163.1| ribonuclease BN-like family integral membrane protein
[Saccharopolyspora erythraea NRRL 2338]
gi|133912125|emb|CAM02238.1| integral membrane protein, ribonuclease BN-like family
[Saccharopolyspora erythraea NRRL 2338]
Length = 323
Score = 119 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 99/278 (35%), Gaps = 14/278 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + +A + A+LS+ P ++ G+LG TV V
Sbjct: 28 RLAIGVVRTSARHRITGLAGEAAFFAVLSLPPLLLGLVGTIGYLGDVIGRDTVARVHGAI 87
Query: 70 W--------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
P+ +A+ + + QVL G+ + A + S ++ +++ Y
Sbjct: 88 LVASAAVLSPQGVAEIVEPTLDQVLTTGQAGISVVGFAVAVWSGSRALDVYIDTISVLYG 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R RL+S + + + + + V P L ++ AL +
Sbjct: 148 LSGYRGLVRQRLMSVLLYTVGLLVGIALLPLMVVGPNVLMHLLPGMDAL------VHGVY 201
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L ++ + LPG + W+ G+ Y+ S
Sbjct: 202 WPTVLVLSAAFLSTLYYMSVPVHTPWRENLPGAAAALLVWIAGSAGLRAYLAVTIQSSPF 261
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L++ + L++LY+ + ++GA LNA + +
Sbjct: 262 HGALSAPIAVLLWLYVTALAILIGAALNAELDRLNPDR 299
>gi|307609441|emb|CBW98931.1| hypothetical protein LPW_07171 [Legionella pneumophila 130b]
Length = 412
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 115/279 (41%), Gaps = 11/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVP 60
+ F + I+HF+++D +AS ++ ++LL+V P + G + Q
Sbjct: 8 KTKFYSCDRFVRFVIQHFIQDDCTYIASALAFTSLLAVVPLMSVGLAIFSSFPVFQGLAE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + +F + K + + Q + +K L + + + + + ++N+ +
Sbjct: 68 PVQNFIFDNFVPATGKIVQSYLQQFTSQVSK-LSIWGIVFLIFTALLVMFTIERAMNKIW 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV R L+ + + LA V L + + P +
Sbjct: 127 RVSSSRHGVSAFLLYWAIISLAPVLLGLSLAASSYLFSMPILADHRAP---------YTI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
Y+ IG F+++ +P KI G + I + F +Y++ ++TY+
Sbjct: 178 LHYSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYAL 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 238 LYGAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|320007739|gb|ADW02589.1| ribonuclease BN [Streptomyces flavogriseus ATCC 33331]
Length = 350
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 107/274 (39%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-------HQFVPT 61
+ ++ D + +E +A+ + LLS+ P ++ L G++
Sbjct: 3 WQLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGLIGLLGYVDDWTSTTTVASIERN 62
Query: 62 VIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ V E + I V + ++ A + S V ++ Y
Sbjct: 63 ILGAVQTVLSERGVNDIAKPLIADVTTGARPDVISLGFAIALWSGSRAVNVFIDTITVMY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A + ++ + V P V +F P +L +++
Sbjct: 123 GLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP---DRVVEFVPWGTEVLAVMY-- 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ +S + +PG + WV+G+ L Y+ + T
Sbjct: 178 -WPLVILLSIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTSTVEGPT 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 237 IYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 270
>gi|290955198|ref|YP_003486380.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260644724|emb|CBG67809.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 321
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 92/274 (33%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ DA F DG+ A ++ +L + PF + +A + + +
Sbjct: 33 RRLLLDAFSRFRYADGFTNARSLAFQVVLGLVPFTIALVGVATTVHTESVGRIIELTLGQ 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + G+ + A ++ + + NR Y +
Sbjct: 93 IVPGASAGLVEDALDGTARSAGSGVWGAVAMWVGLAFAVLNLASALGQVERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + S L A + +V+ V VA + V + G+ L + +
Sbjct: 153 RDRPFLHKYGRSLLLALAAGMPMVLGFLVLVAGDAVVNAVVQALGLPGDRLDWLRPLEVP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ + + P + L G + W+ L + Y+ ++ +Y
Sbjct: 213 LGVALAWVASAVIFRWSPRRDQPGYTWLAFGSAVHLVLWITATWLLSLYVAESGSFGAVY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + GV LG A +
Sbjct: 273 GPLTAFVALLLWANLTGVALFLGIAFAAQLEAAR 306
>gi|284041388|ref|YP_003391318.1| ribonuclease BN [Spirosoma linguale DSM 74]
gi|283820681|gb|ADB42519.1| ribonuclease BN [Spirosoma linguale DSM 74]
Length = 347
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 59/285 (20%), Positives = 117/285 (41%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
+ +F + ++ D+ F+++ +++ ++ + S+ P +V +LA FLG
Sbjct: 32 KGFFANAWIVLRDSFNGFLDDRCLKLSAALAYYTIFSLAPLLVLVMSLASIFLGEEAIQG 91
Query: 61 TVIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + G AK I + I V L+ I +++ ++ S+N
Sbjct: 92 QIFGQINGLVGNDAAKQIQEMIKNVGLSGKTNTALIIGIGTLLLGATSLFVEIQDSVNLI 151
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+RV RL+S ++ L++ V + + +F P LG +
Sbjct: 152 WRVKAKPKQGWLKLIKDRLLSSSLIVSLGFLLLVSLVVNGIVLALSDQLTRFMPGLGVYI 211
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ N + ++ + G+IF LP AK + G IFT + +++G L YI T
Sbjct: 212 ISAINFLVSTAVVTILFGVIF--KVLPDAKIAWKDVRWGAIFTALLFMLGRYLIGLYIDT 269
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+T S+ Y S++ L ++Y GAE + ++ K
Sbjct: 270 TAT-SSAYGAAGSLIVLLTWIYYTAAILYFGAEFTQAYANHFGIK 313
>gi|71065116|ref|YP_263843.1| tRNA-processing RNAse BN [Psychrobacter arcticus 273-4]
gi|71038101|gb|AAZ18409.1| tRNA-processing RNAse BN [Psychrobacter arcticus 273-4]
Length = 525
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 110/268 (41%), Gaps = 6/268 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVF 67
F + HF E++ A+ ++ + LLS+ P + + + + +V++
Sbjct: 19 FQFLRFLTRHFFEDNCQQKAASLTYTTLLSIVPILTVLLMILSSVPALASVRAQIYEVIY 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ ++ I A + L I A+ + + + + + N+ +RV E RS
Sbjct: 79 SNLLPQSSLQVSKYINN-FAEKSSNLTIIGAMFLLFTTIMTLTTIERAFNQIWRV-EDRS 136
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ ++ + ++ ++ +F+ + +L + + G ++
Sbjct: 137 GGMRSMLRYWTIVTLGPLVLGTAFIASSAVQSLNLLNRQIGGYGIDWSF---WVQIVSIA 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
G I ++ F+P A+ + +F I + + LF + F++Y +Y A+
Sbjct: 194 VTIAGFISMYWFIPKARVPAKNAAIAGVFVAIVFELMKHLFGTVMANFTSYEAIYGAFAA 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L+++Y+ +LG E++ ++ I+
Sbjct: 254 LPIFLLWIYLSWNLILLGVEISYTLTIF 281
>gi|284037261|ref|YP_003387191.1| ribonuclease BN [Spirosoma linguale DSM 74]
gi|283816554|gb|ADB38392.1| ribonuclease BN [Spirosoma linguale DSM 74]
Length = 321
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 60/286 (20%), Positives = 120/286 (41%), Gaps = 10/286 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
++ +F + +I DA F+ + +++ ++ + S+ P +V ++ FLG
Sbjct: 6 LKLFFTNAWIVIRDAFNGFLNDRCLKLSAALAYYTVFSLAPLLVLIISVVSIFLGQDAIQ 65
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + G AK I D I V L+ I + +++ ++ S+N
Sbjct: 66 GQIFSQINGLVGNEAAKQIQDMIKSVSLSGKTNTALAIGIITLVIGATSIFVEIQDSVNM 125
Query: 119 AYRVVEM--RSWYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+RV R W RL+S V+ L++ + I ++ ++ P +G
Sbjct: 126 IWRVKAKPKRGWLKLIKDRLLSSSLVVSLGFLLLVSLIINGIILAMSDFLSRYLPGIGVY 185
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L+ +N I ++++ +IF LP AK + G FT + +++G L YI
Sbjct: 186 LVSGFNFLISTAVVSVLFAIIF--KVLPDAKISWRDVRWGAFFTALLFMLGRYLIGLYIE 243
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T ++ S+ Y S++ L ++Y GAE + ++ K
Sbjct: 244 T-TSTSSAYGAAGSLIVILTWIYYTAAILYFGAEFTQAYANHFGIK 288
>gi|52840880|ref|YP_094679.1| ribonuclease BN [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|81378036|sp|Q5ZXT8|Y643_LEGPH RecName: Full=UPF0761 membrane protein lpg0643
gi|52627991|gb|AAU26732.1| ribonuclease BN [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 412
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 115/279 (41%), Gaps = 11/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVP 60
+ F + I+HF+++D +AS ++ ++LL+V P + G + Q
Sbjct: 8 KTTFYSCDRFVRFVIQHFIQDDCTYIASALAFTSLLAVVPLMSVGLAIFSSFPVFQGLAE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + +F + K + + Q + +K L + + + + + ++N+ +
Sbjct: 68 PVQNFIFDNFVPATGKIVQSYLQQFTSQVSK-LSIWGIVFLIFTALLVMFTIERAMNKIW 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV R L+ + + LA V L + + P +
Sbjct: 127 RVSSSRHGVSAFLLYWAIISLAPVLLGLSLAASSYLFSMPILADHRAP---------YTI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
Y+ IG F+++ +P KI G + I + F +Y++ ++TY+
Sbjct: 178 LHYSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYAL 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 238 LYGAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|257068125|ref|YP_003154380.1| hypothetical protein Bfae_09370 [Brachybacterium faecium DSM 4810]
gi|256558943|gb|ACU84790.1| predicted membrane protein [Brachybacterium faecium DSM 4810]
Length = 378
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 105/273 (38%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VV 66
+ ++ ++ W +A ++ LLS+FP V ++ +G T + ++
Sbjct: 11 ILHVLNRVRMRLLDIQVWDVAGTMTFYLLLSLFPGAVAAVSMMSLIGVETETLTALSGMI 70
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAY-FSSNGVEALRISLNRAYRVVEM 125
+P + +P I V + L + A + +SNGV A +L+R + E
Sbjct: 71 TEIFPTLDPRPYLTAIQAVSSTSGGVLGLLLGTAGSLLSASNGVAAFHRALHRVFDTREG 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + R I FG +L +++ + + A + +F +
Sbjct: 131 RPFLWFRTIVFGETVLIVAVVLLAIGMIIVGGEASQRIGEFVGIPRIAFAAWNLVKWPIL 190
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L I + + P + ++ G + + A++ +V + ++ +
Sbjct: 191 LVILIIAVSLAYYLFPNVRLPRYRVMTLGSTLSVLVLFGTALVAGQLLVYATRFAEILTA 250
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L ++ L+ +++ + I GA L+A +
Sbjct: 251 LNGLIAILILMWLANIVVIFGAALDAEFLRARQ 283
>gi|331696938|ref|YP_004333177.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
gi|326951627|gb|AEA25324.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
Length = 409
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 84/210 (40%), Gaps = 5/210 (2%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + I + Q+L L ++ + + + S+ + + ++ RA+ +R+
Sbjct: 181 DAVDQIIAPTVSQILTTGRSELVSLGFVISLWSGSSAMSSFVDAITRAHGQYGIRNPVWQ 240
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIYATMLAL 189
R+++ ++A V +I + P + P + +I + + L
Sbjct: 241 RILALLLYVVALVGGIISLPLLALGP---DRLPGILPESWRPAAITLIADLYYPVIGVIL 297
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ AK LPG + + ++ G YI + Y LA+ +
Sbjct: 298 VLALTTLYKVALPAKPPWWRGLPGALLAAVVFLAGVTGLRVYINWVTGTGYTYGALAAPI 357
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+ + +G +LGA LNAS+ + +
Sbjct: 358 AFLLAAFFIGFAIVLGAHLNASIQALWPAR 387
>gi|294632085|ref|ZP_06710645.1| integral membrane protein [Streptomyces sp. e14]
gi|292835418|gb|EFF93767.1| integral membrane protein [Streptomyces sp. e14]
Length = 349
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 7/226 (3%)
Query: 50 AGFLGAHQFVPTVIDVVFGAWPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG 108
G ++D + + + + V+ + +I + A + S
Sbjct: 38 TGAHTIASLERNILDASRTVLSDQGVKEITQPILKDVMQGGRPDVISIGFVFALWSGSRA 97
Query: 109 VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
V ++ Y + +R TRL++F ++ + + + VA P A+ V +
Sbjct: 98 VNVFIDTITVMYGLDGVRGIVKTRLMAFALFVVGLLIGSVALPLMVAGPDAVVRVVPWS- 156
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
++ ++ L ++ +S + +PG + WVV + L
Sbjct: 157 -----TTVVQVLYWPVVIVLSIAFLTTLYHVSVPVRSPWIEDVPGALVALAMWVVCSFLL 211
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y+ + T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 212 RIYLTSTVEGPTIYGSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 257
>gi|300312602|ref|YP_003776694.1| ribonuclease BN transmembrane protein [Herbaspirillum seropedicae
SmR1]
gi|300075387|gb|ADJ64786.1| ribonuclease BN transmembrane protein [Herbaspirillum seropedicae
SmR1]
Length = 470
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 104/272 (38%), Gaps = 9/272 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVF 67
D++ A E+ +A ++ + +LS+ P + L ++ V
Sbjct: 21 DLLRFAGRRLREDRLPQVAGSLTFTTILSLVPMLTIALALFTAFPLFSTFRASLEAYFVE 80
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ +A I + Q A + + + + S + + N+ +RV + R
Sbjct: 81 NLMPKGVANTILGYLNQ-FAAKSARISAVGGVVLILTSVLTMSTIESVFNQIWRVKKSRP 139
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L+ + + L + + + V + A K P LG + +++
Sbjct: 140 LVQRVLVYWAIITLGPLLIGVSISVTSYLSTATGGAVKSLPWLGASFYTL------VSLM 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ ++ +P L G + I + LF YI+ F TY+ +Y +A
Sbjct: 194 FSTLAYTLLYSTVPNQTVDWRDALAGGLLAGIGLEIAKRLFAVYILKFPTYTMVYGTVAV 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ LV++YM+ + + GA L A++ + + +
Sbjct: 254 LPIFLVWIYMMWMITLFGALLTAALPVVRYER 285
>gi|313207383|ref|YP_004046560.1| ribonuclease bn [Riemerella anatipestifer DSM 15868]
gi|312446699|gb|ADQ83054.1| ribonuclease BN [Riemerella anatipestifer DSM 15868]
gi|315023278|gb|EFT36288.1| Ribonuclease BN [Riemerella anatipestifer RA-YM]
gi|325335161|gb|ADZ11435.1| ribonuclease BN [Riemerella anatipestifer RA-GD]
Length = 301
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 110/276 (39%), Gaps = 4/276 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DV 65
++ + + + + A+ IS S LS+FPF++F ++ ++ + + I
Sbjct: 28 LWKMFEIYGQGVFKNNVVKQAASISWSFFLSIFPFLLFLLSILPYMPHYDKLQFYIFEVF 87
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + +T+ I + K + ++ L A F++NG +L N
Sbjct: 88 MANILPTHMLHDVTEYIQNSIIPNMKSISKLTILFALVFATNGTFSLINGFNE--NTDSK 145
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++ IS L + + F + L + ++ + +
Sbjct: 146 RTFIREYTISILVTLAFVTLIFLSLFGIYYSEVVLKLFTPKYNLNWLIVNLSKIIGFISF 205
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L FI L + + +S +PG + T + +V+ F Y F+ Y+ +Y +
Sbjct: 206 PLFYFILLSLFYWVGCVKVKRWLSAVPGAVLTTLLFVLITYGFIFYATNFARYNVLYGSI 265
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+I+ ++++ + + +LG ELN ++ K P
Sbjct: 266 GTIILAMIWVNLNIILILLGNELNLAIDRVKRNKLP 301
>gi|300710106|ref|YP_003735920.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299123789|gb|ADJ14128.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 442
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 43/251 (17%), Positives = 91/251 (36%), Gaps = 16/251 (6%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+A+ I+ A +S+ P ++F +G +F ++D + I I
Sbjct: 20 ATFLAASIAYYAFVSLIPLLLFTFAAVSAVGGQEFANQILDRTSAFLAPAGQEAIEGAIT 79
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
G ++ + + L + + Y + S + +
Sbjct: 80 G--ETGRGGATIAGSVVLLWSALKLFRGLDTAFSIIYDSGLDK--------SIVGQIANA 129
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ + + + + L L V P + I ++AL + + ++ F+P
Sbjct: 130 LIVFLSILLAIVGMLVLGTVFALVP----TIPFIGYVTPLFALIALSVVFLPMYYFMPDV 185
Query: 204 K-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ + +PG + + W + +F Y Y Y + I+ L +LY+ GV
Sbjct: 186 EGLTVRDAIPGAVLAGVGWALLQSVFGIYASNAGQYEA-YGVIGGILLLLTWLYIGGVLI 244
Query: 263 ILGAELNASMI 273
ILGA LN+ ++
Sbjct: 245 ILGAVLNSVLM 255
>gi|229491263|ref|ZP_04385089.1| ribonuclease BN [Rhodococcus erythropolis SK121]
gi|229321802|gb|EEN87597.1| ribonuclease BN [Rhodococcus erythropolis SK121]
Length = 420
Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 106/280 (37%), Gaps = 13/280 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTV 62
+I + ++ + A+ + LS+ P ++ + G++G +
Sbjct: 27 QLIGRTLSKAWDDSIFGKAATAAFWQTLSLAPLLLGLLGMIGYIGGWFGPNTVEIIESKI 86
Query: 63 IDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + E + I + VL + ++ L + + S+ + S+ A+
Sbjct: 87 VTFSGTIFSESVVDQIIRPTVTDVLQRGRPEIISVGFLLSLWAGSSAISTFVDSIVEAHG 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWN 179
+ R+ R+ + ++ V V + + P V + PA ++ ++
Sbjct: 147 QQDARNPIWQRIFALLLYVMFLVMAVFILPLVALGPTL---VGRALPASWYVVGSNLVDT 203
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
A L + IGL ++ +L G + + ++ + Y+ ++
Sbjct: 204 FYYPAVGLLVIIGLTTLYKVALPKSLPWHRLLAGALVAGVFFMAASTGLRWYLGFVTSTG 263
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+F + LG +LGAE NA++ ++ +
Sbjct: 264 YTYGALATPIAFLLFTFFLGFAVVLGAEFNATVQEFWPAR 303
>gi|253699237|ref|YP_003020426.1| ribonuclease BN [Geobacter sp. M21]
gi|251774087|gb|ACT16668.1| ribonuclease BN [Geobacter sp. M21]
Length = 446
Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 110/270 (40%), Gaps = 5/270 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +F+ + A+ +S + +LS+ P + ++ LGA +
Sbjct: 27 KGRMVRLLQFFTFTFSNFMANNSLLRATALSFTTVLSLVPLLALAFSVLKGLGAQNRLAP 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+I A E + + I + I A + + + + ++ + N A+
Sbjct: 87 LILKQVTAGSEEVVNRVVSYIG---NTNMGSVGAIGLAALIFTAISMLASVEEAFNVAWG 143
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS Y R S +L S L++++ + L ++ + L +
Sbjct: 144 VQETRSLY--RKFSDYLSVLVSAPLLLLAATSITTTLQSKWLIGWLLERTYLGDLFLFML 201
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L++++ + +++F+P + + S L G + W + H+ V Y+ +
Sbjct: 202 GFTPYLSVWVAIFLLYIFIPNTRVRYSSALIGAVLAGTLWQFAQWAYIHFQVGAGNYNAI 261
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y LA++ +V++Y+ + + G E+ A+
Sbjct: 262 YGTLAALPILMVWIYVSWIIVLFGMEVVAA 291
>gi|300865881|ref|ZP_07110623.1| Ribonuclease BN [Oscillatoria sp. PCC 6506]
gi|300336121|emb|CBN55781.1| Ribonuclease BN [Oscillatoria sp. PCC 6506]
Length = 304
Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 102/272 (37%), Gaps = 11/272 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTV 62
+ +I + + + ++ +A+ ++ + S+ P ++ +AG G +
Sbjct: 2 KLKRIISLIKETFKEWQKDKAPTLAAALAFYTVFSLAPLLIIVIAIAGLVFGQEAAQGQL 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYR 121
+ + + A+ I + + + T+ +A + ++N L+ +LN +
Sbjct: 62 VGQLQSLVGKDGAETIQQLVANASHRQSGIIATVIGVATLLWGATNVFTNLKEALNMIWN 121
Query: 122 VVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V + R++SF +L L++ + + ++ L +
Sbjct: 122 VEPPPGRGWLGFLQDRVLSFAMILSIGFLLLVSLVISAVLTAINQWLNGLLHIPSGLWQL 181
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I G ++ + LF ++ FLP K + G T + + +G L Y+ + S
Sbjct: 182 IDFGISFSVVTVLF---ALIYKFLPDVKLVWNDVWVGAAITSVLFTIGKSLIGIYLGS-S 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ Y S + L+++ LGAE
Sbjct: 238 GIGSTYGAAGSFVILLLWINYSAQILFLGAEF 269
>gi|319946746|ref|ZP_08020980.1| ribonuclease BN [Streptococcus australis ATCC 700641]
gi|319746794|gb|EFV99053.1| ribonuclease BN [Streptococcus australis ATCC 700641]
Length = 322
Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 50/278 (17%), Positives = 113/278 (40%), Gaps = 7/278 (2%)
Query: 1 MREYFCIV--FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M+++ + I + ++ + + ++ L+S+ P ++ AN+ +
Sbjct: 1 MKKFLKWLGQRPFIKGFLRFYMASESDITSIAVAYYLLISILPLLLIAANILPYFQIRPT 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + P + + + I VL P+ GL + S ++A + SS + L+ + N+
Sbjct: 61 --QILLTLREVLPASMYRIVLQVISSVLTKPSTGLLSFSIISALWVSSQCIAYLQRAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+Y V + R +R+ S + + + + + V + F ++ L +
Sbjct: 119 SYGVEKERGIIWSRIFSILISFALQGLFGLSLVLTMFGRMIIRSVYEIFKFDESIYLRLL 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N + LF+ L+ ++ LP K K + PG IF + +F Y+ + T
Sbjct: 179 NISGPSVYFLLFLTLLLLYYTLPNIKIPKFRYVFPGAIFVTAVLYLTLNIFWKYVDHYIT 238
Query: 238 YSTMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
S++ + + ++ I+G LNAS+
Sbjct: 239 SFLDARFFGSVLLAIIMFWFILVAKVLIIGCILNASIQ 276
>gi|262197105|ref|YP_003268314.1| ribonuclease BN [Haliangium ochraceum DSM 14365]
gi|262080452|gb|ACY16421.1| ribonuclease BN [Haliangium ochraceum DSM 14365]
Length = 370
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 109/271 (40%), Gaps = 14/271 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVF 67
++I+ E F ++ +A+ +S + ++ P +V AG + + V + ID V
Sbjct: 12 WEILKGTFEEFSNDECPRLAAALSYYTVFALPPLLVILIISAGLVLSPAQVQSWIDGQVG 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVV 123
+A+ + + + ++ F+ + A + +S L+ +LN + V
Sbjct: 72 SLIGPEVAEQMRVMVEHARSKVSQD-FSFGLVLAVGGLLFGASGAFAQLQKALNATWGVT 130
Query: 124 EM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+++ R+ S G +L + L++ + I + P+ G +++
Sbjct: 131 PDPEGGGIKNFVAKRIFSLGIILAIAFFLLVALVISSLIAALSDQLGMLLPS-GLSSVLL 189
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
W + + + + +P A + G + T + +V G L + YI S
Sbjct: 190 WALDTGINLAVITLLFGSMFKVMPDAIIAWRDVWVGALVTAVLFVAGKALISFYIGR-SD 248
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ LV++Y + ++GAE
Sbjct: 249 LGEIYGATAALAILLVWIYYSSMILLIGAEF 279
>gi|227487926|ref|ZP_03918242.1| tRNA-processing ribonuclease BN [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227542567|ref|ZP_03972616.1| tRNA-processing ribonuclease BN [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092132|gb|EEI27444.1| tRNA-processing ribonuclease BN [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227181765|gb|EEI62737.1| tRNA-processing ribonuclease BN [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 383
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 106/281 (37%), Gaps = 18/281 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
++ F+ + A+ ++ L+ P ++ ++A + Q + +
Sbjct: 54 VLRRTWSDFILDAIMDRAAVLAFFMFLTAAPTVLAAYSIATLIFARNERQVTNLTQEAIA 113
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P IA + + ++ A+G ++ L A + SS V A S N Y VE
Sbjct: 114 KYVPSEIADHVRAVVDVIVGSAAEGTWALVLAVLIALFSSSAWVRAFARSANFIYGRVEG 173
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV----------RKFFPALGNLLL 175
R+ T L +G L + VI+ + + V + L + L
Sbjct: 174 RTVIPTWLTMWGITFLMVIGAVIIVGALLLRQSVVLAVFEPIADPLGLVEELDFLTGIFL 233
Query: 176 IIWNG-RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIV 233
IW RI L + ++ F P + + G + ++ + L Y+
Sbjct: 234 PIWVWIRIPVIALIALTLVAVLYYFAPNVRPQHFRWLTVGSAVSVVTIGITWWLLGLYLQ 293
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
F+ S+ Y + +I+ + +++ + ++G +L+A ++
Sbjct: 294 FFAG-SSAYGAIGTIIAVIFACWIMNILLLIGIKLDAEVLR 333
>gi|77165113|ref|YP_343638.1| ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|254433289|ref|ZP_05046797.1| Ribonuclease BN-like family [Nitrosococcus oceani AFC27]
gi|76883427|gb|ABA58108.1| tRNA-processing RNAse BN [Nitrosococcus oceani ATCC 19707]
gi|207089622|gb|EDZ66893.1| Ribonuclease BN-like family [Nitrosococcus oceani AFC27]
Length = 447
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 108/267 (40%), Gaps = 2/267 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +IY F + D A+ + + LLS+ P + ++ G H +
Sbjct: 28 RTFLRHKAKLIYAVSGEFFKGDLTLQATSLVYTTLLSLAPLLAVSFSVLKAFGIHNEIEP 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ + T I V + L ++ Y + ++ + + N +R
Sbjct: 88 VLHHFLLPLGPRGEEITTKIIQYVENLKVGVLGSVGVGLLFYTVLSLIQKVEGAFNHVWR 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + R + VLL LV + A + ++++ L +
Sbjct: 148 IKAERPFVR-RFSDYLSVLLIGPVLVFSAVGATASVMQTSFIQTLLEF-ELLGKTLVVVS 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + G FV+LFLP K K+ S + G + I W +LF ++ T + Y +
Sbjct: 206 KLLPYLLVIGGFTFVYLFLPNTKVKLGSAVVGGVVAGILWESIGILFAFFVATSTKYDAI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ LA ++ +++LY+ + ++GA++
Sbjct: 266 YSSLAILILFMIWLYISWLILLVGAQV 292
>gi|294142884|ref|YP_003558862.1| ribonuclease BN [Shewanella violacea DSS12]
gi|293329353|dbj|BAJ04084.1| ribonuclease BN [Shewanella violacea DSS12]
Length = 366
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 108/275 (39%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VV 66
++ + + E+ A H++ LLS+ P + ++ + I+ +
Sbjct: 45 IWHFMVHLKQRLAEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFSEIRGQIESFI 104
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + + I + + +KG + A + + + S+N +R E R
Sbjct: 105 YENFLPSAGDSVQVYINEFVDNASKG-TAVGIAALMVVAIMLISNIDKSINSIWRTTEKR 163
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S ++ + + VL L+ S V + ++L +L ++ M
Sbjct: 164 SMVVSFSM-YWMVLTLGPVLMGASLVATSYVVSLKVFNG-----ADLTGVVPLLVERLPM 217
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ +++ +P K K L G I + + G F Y+ F +Y +Y LA
Sbjct: 218 FFSVATFLLIYMVVPNTKVKFFHALLGAIAAALLFEFGKKGFAFYLTQFPSYEAIYGALA 277
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+I +++Y+ + ++GAE+ A++ Y +K P
Sbjct: 278 TIPILFMWVYLSWMIVLIGAEITAALPEYLDKKLP 312
>gi|119513701|ref|ZP_01632699.1| hypothetical protein N9414_21923 [Nodularia spumigena CCY9414]
gi|119461650|gb|EAW42689.1| hypothetical protein N9414_21923 [Nodularia spumigena CCY9414]
Length = 186
Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 79/173 (45%), Gaps = 2/173 (1%)
Query: 102 AYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA 159
+ +S + + ++ +++ + R ++ +L+S G + + V SF+ L
Sbjct: 1 IWTASGAISTAMAAFDQIHQIPSEKQRPFWKAKLVSLGLTIATILLFVFASFLVFISDLL 60
Query: 160 LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
L V +L LL + R + + V+ + P+ + ++PG I +
Sbjct: 61 LGMVVNETSSLIFLLHLWQLLRWPLALGIIATAFSLVYRYGPSVWNSGTPMMPGAISASV 120
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
SW + + LF Y+ F Y+ +Y + +++ +++L+M ++G +LN S+
Sbjct: 121 SWAILSALFRTYVANFGNYNKVYGAVGAVIVLMLWLWMSAAVMLIGDQLNVSV 173
>gi|54296667|ref|YP_123036.1| hypothetical protein lpp0698 [Legionella pneumophila str. Paris]
gi|53750452|emb|CAH11846.1| hypothetical protein lpp0698 [Legionella pneumophila str. Paris]
Length = 412
Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 114/279 (40%), Gaps = 11/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVP 60
+ F + I+HF+++D +AS ++ ++LL+V P + G + Q
Sbjct: 8 KTKFYSCDRFVRFVIQHFIQDDCTYIASALAFTSLLAVVPLMSVGLAIFSSFPVFQGLAE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + +F + K + + Q + +K L + + + + + ++N+ +
Sbjct: 68 PVQNFIFDNFVPATGKIVQSYLQQFTSQVSK-LSIWGIVFLIFTALLVMFTIEQAMNKIW 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV R L+ + + LA V L + + P +
Sbjct: 127 RVSSSRHGVSAFLLYWAIISLAPVLLGLSLAASSYLFSMPILADHRAP---------YTI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
Y+ IG F+++ +P KI G + I + F +Y++ ++TY
Sbjct: 178 LHYSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYEL 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 238 LYGAFAAVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|291008723|ref|ZP_06566696.1| ribonuclease BN-like family integral membrane protein
[Saccharopolyspora erythraea NRRL 2338]
Length = 313
Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 99/278 (35%), Gaps = 14/278 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + +A + A+LS+ P ++ G+LG TV V
Sbjct: 18 RLAIGVVRTSARHRITGLAGEAAFFAVLSLPPLLLGLVGTIGYLGDVIGRDTVARVHGAI 77
Query: 70 W--------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
P+ +A+ + + QVL G+ + A + S ++ +++ Y
Sbjct: 78 LVASAAVLSPQGVAEIVEPTLDQVLTTGQAGISVVGFAVAVWSGSRALDVYIDTISVLYG 137
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R RL+S + + + + + V P L ++ AL +
Sbjct: 138 LSGYRGLVRQRLMSVLLYTVGLLVGIALLPLMVVGPNVLMHLLPGMDAL------VHGVY 191
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L ++ + LPG + W+ G+ Y+ S
Sbjct: 192 WPTVLVLSAAFLSTLYYMSVPVHTPWRENLPGAAAALLVWIAGSAGLRAYLAVTIQSSPF 251
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L++ + L++LY+ + ++GA LNA + +
Sbjct: 252 HGALSAPIAVLLWLYVTALAILIGAALNAELDRLNPDR 289
>gi|226306295|ref|YP_002766255.1| hypothetical protein RER_28080 [Rhodococcus erythropolis PR4]
gi|226185412|dbj|BAH33516.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 415
Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 106/280 (37%), Gaps = 13/280 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTV 62
+I + ++ + A+ + LS+ P ++ + G++G +
Sbjct: 27 QLIGRTLSKAWDDSIFGKAATAAFWQTLSLAPLLLGLLGMIGYIGGWFGPNTVEIIESKI 86
Query: 63 IDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + E + I + VL + ++ L + + S+ + S+ A+
Sbjct: 87 VTFSGTIFSESVVDQIIRPTVTDVLQRGRPEIISVGFLLSLWAGSSAISTFVDSIVEAHG 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWN 179
+ R+ R+ + ++ V V + + P V + PA ++ ++
Sbjct: 147 QQDARNPIWQRIFALLLYVMFLVMAVFILPLVALGPTL---VGRALPASWYVVGSNLVDT 203
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
A L + IGL ++ +L G + + ++ + Y+ ++
Sbjct: 204 FYYPAVGLLVIIGLTTLYKVALPKSLPWHRLLAGALVAGVFFMAASTGLRWYLGFVTSTG 263
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+F + LG +LGAE NA++ ++ +
Sbjct: 264 YTYGALATPIAFLLFTFFLGFAVVLGAEFNATVQEFWPAR 303
>gi|54293627|ref|YP_126042.1| hypothetical protein lpl0680 [Legionella pneumophila str. Lens]
gi|53753459|emb|CAH14914.1| hypothetical protein lpl0680 [Legionella pneumophila str. Lens]
Length = 412
Score = 118 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 115/279 (41%), Gaps = 11/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVP 60
+ F + I+HF+++D +AS ++ ++LL+V P + G + Q
Sbjct: 8 KTKFYSCDRFVRFVIQHFIQDDCTYIASALAFTSLLAVVPLMSVGLAIFSSFPVFQGLAE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + +F + K + + Q + +K L + + + + + ++N+ +
Sbjct: 68 PVQNFIFDNFVPATGKIVQSYLQQFTSQVSK-LSIWGIVFLIFTALLVMFTIERAMNKIW 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV R L+ + + LA V L + + P +
Sbjct: 127 RVSSSRQGVSAFLLYWAIISLAPVLLGLSLAASSYLFSMPILADHRAP---------YTI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
Y+ IG F+++ +P KI G + I + F +Y++ ++TY+
Sbjct: 178 LHYSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYAL 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 238 LYGAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|317506481|ref|ZP_07964282.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974]
gi|316255242|gb|EFV14511.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974]
Length = 345
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 113/282 (40%), Gaps = 13/282 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPT 61
++ A+ E +A ++ + +LS+ P + G++
Sbjct: 20 LRVVTRALAMSWEHSIFAESAGAAFWQILSLPPMFLGLLGTLGYVSPWFGPGVLEDVQHK 79
Query: 62 VIDVVFGAWPEVIA-KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ A + + + I ++ V A + + ++S + + + S+ + A S+ RA+
Sbjct: 80 ILAFAQQALSQQLVNEVIRPTLMAVTAHGREEVTSLSFVLSLWAGSSAISAFVDSIVRAH 139
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP--LALAYVRKFFPALGNLLLIIW 178
E+R R+ + G ++ + + P + ++ P L + ++
Sbjct: 140 NQTELRHPVRQRIFALGLYIVFLACAMFALPLLSVTPHEVTTRLPQETHPVLSSAYNDLY 199
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
A + + + L + + ++PG + + ++VG Y+ ++
Sbjct: 200 G---PALFVGVTLFLSWFYRIALPVPPSWWRLVPGAVLAVLFFLVGRSGLLWYLNWVTST 256
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA+ + L+ + +G+ ILGAELN+++ ++ +K
Sbjct: 257 GYTYGALATPIAMLLLAFFIGMSVILGAELNSAIEHFWPTRK 298
>gi|295677064|ref|YP_003605588.1| ribonuclease BN [Burkholderia sp. CCGE1002]
gi|295436907|gb|ADG16077.1| ribonuclease BN [Burkholderia sp. CCGE1002]
Length = 435
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 45/277 (16%), Positives = 104/277 (37%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A + E+ +A ++ + +L++ P L
Sbjct: 5 RFDLDTLKRLAQFAAQRIGEDRIPQVAGSLTFTTMLALVPLATVAFALFTAFPIFSSFQA 64
Query: 62 VIDVVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ P + I + Q A AKGL TI + + + + + N
Sbjct: 65 SLQFFLADHLMPAQLNDQIFKYLNQ-FASKAKGLTTIGMIILFVTAVMTMMTVESAFNVI 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R R++ + ++ I+ V ++I L F A + +I
Sbjct: 124 WRVRKARP-VAQRILVYWAIITLG---PILIGVSLSISSYLFTQSMSFSAAQRITPLIEW 179
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
AT+ + ++++LP + + + G + +++ + F +Y+ TY+
Sbjct: 180 ALASATLPFTMLAFTILYVYLPNCRVEWRDAVVGGVIAAVAFELAKRGFGYYVRRIPTYT 239
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y A++ LV++Y+ + GA + +++
Sbjct: 240 AVYGAFAAVPLFLVWMYLCWFITLTGAMIASALPAIR 276
>gi|239928163|ref|ZP_04685116.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 339
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 103/263 (39%), Gaps = 14/263 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVIDVVFGAWPE 72
+E +A+ + LLSV P ++ L G++ ++D +
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLSLIGLLGYVDAWTGADTIQSVQRNLLDASRTVLSD 60
Query: 73 -VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + V + ++ L A + S V ++ Y + +R T
Sbjct: 61 RGVKEIAEPILRDVTKGGRPDVISLGFLIAVWSGSRAVNVFIDTITVMYGLDGVRGIVKT 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RL++F ++A + + + VA P A+ + + L +L +L
Sbjct: 121 RLLAFLLFIVALLIGSVALPLMVAGPDAVVRIVPWSTTLVQILY------WPVVILLSVA 174
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ +S + +PG + WV+G+ L Y+ + T+Y LA+ +
Sbjct: 175 FLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRLYLTSTVEGPTIYGSLAAPVAV 234
Query: 252 LVFLYMLGVFFILGAELNASMII 274
L+++ + ++GA +NA++
Sbjct: 235 LLWIGVSAFAVLVGAAVNAAIDR 257
>gi|126665845|ref|ZP_01736826.1| ribonuclease BN-like family protein [Marinobacter sp. ELB17]
gi|126629779|gb|EBA00396.1| ribonuclease BN-like family protein [Marinobacter sp. ELB17]
Length = 441
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 104/259 (40%), Gaps = 2/259 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+Y I F+ A + + LLS+ P + ++ LG HQ + + F
Sbjct: 37 RSLYALIRDFISGQLTLHAMSLVYTTLLSIVPLLALSFSVLKALGVHQKMEPFLYQFFQP 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + V + L ++ Y + V+ + S N +RV EMRS
Sbjct: 97 LGPQGIEIAERILGFVDNMKVGVLGSVGLAVLVYTVVSLVQKIERSFNMIWRVPEMRS-L 155
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R ++ V++ L++ + A + ++V+ + +I + +
Sbjct: 156 AQRFSNYLSVIMVGPLLMVSAIGISATIFSSSFVQTLIE-IEPFGSVILLVSRFTPFFLV 214
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FV++F+P + K+ + +SW +LF ++ + Y+ +Y+ A +
Sbjct: 215 VGAFTFVYVFIPNTRVKLRYAFLAGLIAGVSWQGAGMLFASFVAGSAKYAAIYSSFAIGI 274
Query: 250 TCLVFLYMLGVFFILGAEL 268
L+++Y+ + +LGA L
Sbjct: 275 IMLIWIYLNWMILLLGASL 293
>gi|186682818|ref|YP_001866014.1| ribonuclease BN [Nostoc punctiforme PCC 73102]
gi|186465270|gb|ACC81071.1| putative ribonuclease BN [Nostoc punctiforme PCC 73102]
Length = 338
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 44/277 (15%), Positives = 96/277 (34%), Gaps = 11/277 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVV 66
++ + + + + E+ +A+ ++ + S+ P ++ +AG G ++ +
Sbjct: 6 IWKLFQETFKEWSEDKASRLAAALAYYTIFSIAPLLIIVIAIAGAVFGEEAARGQIVGQI 65
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEM 125
G A+ I I + +I S + ++ L+ SLN + V
Sbjct: 66 QGLVGPDGAEFIQTAIQNANKPQTGAIASIISVVVLLLGATGLFTELQDSLNTIWEVKPK 125
Query: 126 R-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R++SF V+ L++ + A+ + Y P + L I+
Sbjct: 126 PGRGVTNIIRLRILSFAMVIGIGFLLLVSLVISTALSALVTYFSNLLPGVDFLWQILN-- 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + LP K +L G + T + +G L Y+ ++ +
Sbjct: 184 -FLLSFAITTFLFGLIFKVLPDVKIGWSDVLIGAMLTSFLFSIGRFLLGQYLGN-GSFGS 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y S++ L ++ GAE Y
Sbjct: 242 AYGAAGSLVVILAWVNYAAQILFFGAEFTQVYARRYG 278
>gi|75909614|ref|YP_323910.1| ribonuclease BN [Anabaena variabilis ATCC 29413]
gi|75703339|gb|ABA23015.1| Ribonuclease BN [Anabaena variabilis ATCC 29413]
Length = 299
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 106/283 (37%), Gaps = 11/283 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
++ + +A++ + ++ +A+ ++ + S+ P ++ +AG G +
Sbjct: 2 NLKAIWQLFQEALQEWNDDKASRLAAALAYYTVFSIAPLLIIVIAIAGAVFGEEAARGEI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYR 121
+ + G A+ I I V + ++ ++A + GV L+ SLN +
Sbjct: 62 VQQIQGLVGRDGAEFIETAIQNVDRPKTGTIASLISIALLLLGATGVFIELQDSLNTIWE 121
Query: 122 VVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V + + R +SFG VL L++ + + + Y P + L +
Sbjct: 122 VQPKPGRGVKGIFRQRFLSFGMVLGIGFLLLVSLVISTVLSTLVNYFGGLLPGVDFLWQL 181
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + LP + +L G I T I + +G L Y+ +
Sbjct: 182 VN---FIISFAITTLLFALIFKVLPDVRITWNDVLVGAILTSILFSIGRFLLGQYLGN-A 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + Y S++ L ++Y GAE Y R+
Sbjct: 238 GFGSAYGAAGSVVLILAWVYYTAQILFFGAEFTQVYARKYGRR 280
>gi|332534549|ref|ZP_08410385.1| ribonuclease BN [Pseudoalteromonas haloplanktis ANT/505]
gi|332036039|gb|EGI72517.1| ribonuclease BN [Pseudoalteromonas haloplanktis ANT/505]
Length = 301
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 100/262 (38%), Gaps = 10/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWP 71
+++ A +++ LLS+ P I G + + I+ +F +
Sbjct: 24 MQYFNRCIDDQITVNAGYLAYVTLLSLVPLIAVGVAIFSAFPGFESTRMEIESFLFTNFV 83
Query: 72 EVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I + I + I LAA + + + +LNR +R+ + R I
Sbjct: 84 PTSTDVIREHISSFAGNANQMTAVGIGFLAAI--ALLLIRNVDATLNRIWRIKKKRPMMI 141
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + + + L V L V I +++ + P LL +
Sbjct: 142 SFAVYWMVLSLGPVLLGASIGVTSYIVSLVSFADQGIPGFSGFLLKL------LPYGISM 195
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+G I ++ +P + + +PG F + + + F YI F +Y +Y +A+I
Sbjct: 196 VGFIMLYTLVPNTRVSFRAAIPGAFFAALLFELTKKGFALYISHFPSYEVIYGAVATIPI 255
Query: 251 CLVFLYMLGVFFILGAELNASM 272
V++Y+ V +LGAE A +
Sbjct: 256 LFVWVYLSWVVVLLGAEFTACI 277
>gi|114570028|ref|YP_756708.1| ribonuclease BN [Maricaulis maris MCS10]
gi|114340490|gb|ABI65770.1| ribonuclease BN [Maricaulis maris MCS10]
Length = 304
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 97/270 (35%), Gaps = 8/270 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+F +I AI + D A S +L++FP I + G + + I
Sbjct: 15 LVRIFSVIIAAISRAMARDVMLFAGGASFFGMLALFPAIALAMSAYGLIFSASDAEQQIA 74
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYR 121
P + ++ ++ P L +A A + +S GV+A+ LN
Sbjct: 75 RFAEIMPPGAQDFVLGQMGRLADAPIAALSVNGFIALMIALFAASRGVKAIIAGLNHLAE 134
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
++R+ +++ VL+ L + + + IP+ LA + L + N
Sbjct: 135 DRDIRNILQFNILAMMSVLVGGALLTVANLAVLLIPVLLARLAAALGIEALDLGSVVN-E 193
Query: 182 IYATMLALFIGLIFVHLFLPAAKS---KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+FI L ++ + + I + W+ + F+ Y+ +
Sbjct: 194 WTVAAGFMFIALELLYRVTMRKRKQAVSWRASTVAAIVATLLWLGLSKGFSTYVAEVIDF 253
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S Y L +++ L+++Y G L
Sbjct: 254 SV-YGSLGALVVFLLWIYWSAYAVFFGGAL 282
>gi|282862619|ref|ZP_06271680.1| ribonuclease BN [Streptomyces sp. ACTE]
gi|282562305|gb|EFB67846.1| ribonuclease BN [Streptomyces sp. ACTE]
Length = 317
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 96/275 (34%), Gaps = 4/275 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG++ + ++L +L+V P ++ L+ + +
Sbjct: 33 WPLLRDSFVRFRYADGFSHSRALALQTVLAVVPLVIAFVGLSSAMHTEDLGRVAELTIHR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A+ + D + + G + + ++ + + NR Y V
Sbjct: 93 ITEGPSAEVVDDALERSRRHADDGAKVALWFGLVFSLTNTTTAMCQIERGANRIYGVERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ L + A + L I VA +A V + R A
Sbjct: 153 RDFHRKYLRGLVMSVTAGIPLGIGFVAMVAGGDLVAAVVDVYGLGARAESAWDLLRWPAG 212
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + + P + + L G + W L + Y+ ++ T+Y
Sbjct: 213 VLLVLLSASAIFRRSPRRRQPGYTWLAFGAAVYLVLWTTLTWLLSLYLEVSGSFDTVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L + M+ L++ Y+ + LG A + R+
Sbjct: 273 LTAFMSLLLWAYLTSIALFLGLSFAAQLEAVRARR 307
>gi|326562450|gb|EGE12769.1| putative ribonuclease BN [Moraxella catarrhalis 7169]
gi|326563224|gb|EGE13492.1| putative ribonuclease BN [Moraxella catarrhalis 12P80B1]
gi|326569158|gb|EGE19220.1| putative ribonuclease BN [Moraxella catarrhalis BC1]
Length = 500
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 112/271 (41%), Gaps = 6/271 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAW 70
+ + HF+++D A+ ++ + LL++ P + + + A + V +
Sbjct: 19 LRLLVRHFIDDDTQQKAASLTYTTLLALVPILTVVLVIFSSVPALEGLREQVQQTISANL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
++ + I A + L + + + + + N+ +RV E RS
Sbjct: 79 FPTASEQVAGYIRS-FAEKSSNLGLVGVAGLFVTAIMTLNTIEYAFNKIWRVQE-RSGGA 136
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+I + ++ ++ ++F + ++ ++ + G I ++ +
Sbjct: 137 ASIIRYWTIITLGPVILGVAFGASSAIQSMDFLNRQIAGYGIDWGI---WAYLVSLALMT 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
G I ++ F+P A+ I + I T I + +F + F++Y +Y A++
Sbjct: 194 CGFILLYWFIPKAQVPIKNAAIAGIVTAILFESIKQVFGTVMTNFTSYEAIYGAFAALPI 253
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
L++LY+ +LG +++ ++ I+ ++ P
Sbjct: 254 FLLWLYISWNLILLGVQISYTLTIFDTKEVP 284
>gi|288559250|sp|A3QIW3|Y3545_SHELP RecName: Full=UPF0761 membrane protein Shew_3545
Length = 305
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 113/280 (40%), Gaps = 8/280 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R ++ + + E+ A H++ LLS+ P + ++ + +
Sbjct: 10 LRSIMLGIWQFMIHLKQRITEDQINMRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ I+ ++ + + I + +A +KG + A + + + SLN
Sbjct: 70 SHIETFIYENFIPSAGDSVQMYINEFVANASKG-TAVGIGALVVVAILLISNIDKSLNGI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E R ++ + Y ++ ++ V+M VA ++ + +L ++
Sbjct: 129 WRTTEKRPMVVSFSM---YWMVLTLGPVLMGASLVATSYVVSL---KLFSGTDLSGVVPL 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
M + +++ +P K K L G I + + +G F Y+ F Y
Sbjct: 183 LVERLPMFFSVATFLLIYMVVPNTKVKFFHALLGAIVAALLFELGKKGFALYLTEFPAYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y LA+I +++Y+ + ++GAE+ A+M Y ++
Sbjct: 243 AIYGALATIPILFMWVYLSWIIVLIGAEITAAMPEYLDKR 282
>gi|298528711|ref|ZP_07016115.1| ribonuclease BN [Desulfonatronospira thiodismutans ASO3-1]
gi|298512363|gb|EFI36265.1| ribonuclease BN [Desulfonatronospira thiodismutans ASO3-1]
Length = 443
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 109/277 (39%), Gaps = 3/277 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + A++ F D AS ++ LLS+ P + +A G + +
Sbjct: 25 KAFMTHHLRVFLAALQGFSRNDCSMRASSLTYYTLLSIVPVMALAFGIAKGFGLDDMLQS 84
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
++ GA E I + +L V G+ + L + ++ + +S N +
Sbjct: 85 QLEQYLGA-HEEIFDEVVQFSYSMLEVTRGGVIAGVGFLFLLWAVIKVLDHIELSFNAVW 143
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E RSW ++LA V +++ + V + + Y L + + G
Sbjct: 144 GVQEGRSWVRKFTEYLSVMVLAPVLVILSGSLTVFLTTEI-YKYLAEGWLALVADLFQWG 202
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + +++ F+ + +P + + L I + + + + ++ V Y+
Sbjct: 203 AQFTPYVIIWLLFTFLFMAMPNTRVNFKAALIAGIISGTMFQLLQWGYVNFQVGVVRYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+Y A++ LV+L + + +LGAEL+ +
Sbjct: 263 IYGSFAALPLFLVWLQLSWMIVLLGAELSYAYQNVRR 299
>gi|284166403|ref|YP_003404682.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284016058|gb|ADB62009.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 438
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 103/272 (37%), Gaps = 16/272 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F++ DA+ E +A+ ++ +S+ P ++ LA +G +
Sbjct: 8 FELAGDALRLARSEQLTLLAAGVAFYGFISLVPLMLLALGLAASIGGEALAERLTAAATD 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
E + + + +L + + AL + SS + L + ++ Y +
Sbjct: 68 VLTESARELLAETVLDDTGRQSATVA--GALGLLWGSSRVLRGLDRAFSQVYGTAGSK-- 123
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
S ++ + ++ +A+ AL + ++ P LG + +L
Sbjct: 124 ------SLLDTAWDAMVVFLVITAGLALVAALELLIRYVPFLGATI-----IGPIFVLLG 172
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + +++ P A + LPG + + W + F+ Y Y +Y L ++
Sbjct: 173 LTVTFLPLYVVFPDADVDLREALPGTLVAAVGWYALSRTFSLYATVAGDY-VVYGALGAV 231
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L +LY+ + + GA LNA + ++
Sbjct: 232 FLVLAWLYLGSIILVFGAVLNAVLADREVDRQ 263
>gi|326571351|gb|EGE21368.1| putative ribonuclease BN [Moraxella catarrhalis BC8]
Length = 500
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 112/271 (41%), Gaps = 6/271 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAW 70
+ + HF+++D A+ ++ + LL++ P + + + A + V +
Sbjct: 19 LRLLVRHFIDDDTQQKAASLTYTTLLALVPILTVVLVIFSSVPALEGLREQVQQTISANL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
++ + I A + L + + + + + N+ +RV E RS
Sbjct: 79 FPTASEQVAGYIRS-FAEKSSNLGLVGVAGLFVTAIMTLNTIEYAFNKIWRVQE-RSGGA 136
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+I + ++ ++ ++F + ++ ++ + G I ++ +
Sbjct: 137 ASIIRYWTIITLGPVILGVAFGASSAIQSMDFLNRQIAGYGIDWGI---WAYLVSLALMT 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
G I ++ F+P A+ I + I T I + +F + F++Y +Y A++
Sbjct: 194 CGFILLYWFIPKAQVPIKNAAIAGIVTAILFESIKQVFGTVMTNFTSYEAIYGAFAALPI 253
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
L++LY+ +LG +++ ++ I+ ++ P
Sbjct: 254 FLLWLYISWNLILLGVQISYTLTIFDTKEVP 284
>gi|330504179|ref|YP_004381048.1| tRNA-processing RNAse BN [Pseudomonas mendocina NK-01]
gi|328918465|gb|AEB59296.1| tRNA-processing RNAse BN [Pseudomonas mendocina NK-01]
Length = 405
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 110/284 (38%), Gaps = 11/284 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + FVE G A+ ++ + L +V P + + + A Q V
Sbjct: 1 MQVRLKDWLGFWLSLYQRFVENRGAGNAAALTYTTLFAVVPMMTVTFAMLSAIPAFQGVG 60
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I +F + + + + + + + L A + + + + N
Sbjct: 61 EEIQGFIFHNFVPSTGETVQEYLREFTTQARQ-LTWFGVGLLAVTAFLMLVTIEKTFNVI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R R +S + A ++L + A Y+ G ++
Sbjct: 120 WRVRQPR-----RGMSSFLLYWAILSL--GPLLLGAGFAVSTYIASLSLISGPDAVVGAK 172
Query: 180 GRI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ +A +L+ ++ +P + + L G +F+ I + + LF Y+ F Y
Sbjct: 173 TLLSFAPLLSSIAAFTLLYAAVPNTRVPLRHALLGGLFSAILFEIAKALFGLYVRLFPGY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM-IIYYWRKKP 281
+Y A++ LV++Y+ + +LGAEL + YWR++P
Sbjct: 233 HLIYGAFATVPLFLVWIYLSWLIVLLGAELVYGLSQPRYWRREP 276
>gi|313105837|ref|ZP_07792100.1| putative ribonuclease [Pseudomonas aeruginosa 39016]
gi|310878602|gb|EFQ37196.1| putative ribonuclease [Pseudomonas aeruginosa 39016]
Length = 411
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 10/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
MRE+F + FV + A+ ++ + L +V P + ++ + A H
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ +F + + + + L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSFTTQARH-LTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R G LL L + + A Y+ G L
Sbjct: 120 WRVRQPR-------RGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLSLLHGPDALPGAE 172
Query: 180 GRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ LA + ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 173 TLLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 233 QLIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|222053928|ref|YP_002536290.1| ribonuclease BN [Geobacter sp. FRC-32]
gi|221563217|gb|ACM19189.1| ribonuclease BN [Geobacter sp. FRC-32]
Length = 440
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 105/271 (38%), Gaps = 5/271 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ Y+ I+ I++F +++ AS +S + +LS+ PF + V
Sbjct: 26 IKRYWVKYLQIMALVIKNFWDDNCLLRASALSFTTILSIVPFFALTFAVLKGFDVQNKVE 85
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + + TI + + + + N +
Sbjct: 86 P---YILEQVTAGSEELVDKIVTYINNTNMTSMGTIGLATLVVTAITLLGNIEEAFNVIW 142
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V RS + R S +L S L++++ + V L V ++ L ++
Sbjct: 143 GVKGTRS--LQRKFSDYLSVLLSGPLLMLAAISVTTTLQSQSVVRWLLQTSYLGDVLLFS 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++++ L F+++ +P + K S L G + W + ++ V Y+
Sbjct: 201 FRLIPYISVWLALFFLYILIPNTRVKAKSALIGGVLAGTVWQAAQWGYLYFQVGVGKYNA 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y LA + +V++Y V + G E+ A+
Sbjct: 261 IYGTLALLPIFMVWIYTSWVIVLFGVEVVAA 291
>gi|269103703|ref|ZP_06156400.1| ribonuclease BN [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163601|gb|EEZ42097.1| ribonuclease BN [Photobacterium damselae subsp. damselae CIP
102761]
Length = 322
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 105/271 (38%), Gaps = 10/271 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ F + + A ++ LLS+ P I + Q + V+
Sbjct: 31 RISMTFAYFRYLFQRINHDRLTVTAGSMAYVTLLSLVPLITVVLSALSSFPVFQGLGEVL 90
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYR 121
+ V + + + + Q +A G T + A + + + ++ +LN +R
Sbjct: 91 QNFVIENFVPAAGEVVKTYLNQFVA--NAGKMTAVGIGALFVVAMMLISSIDTALNYIWR 148
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E R I+ S +++L +++ S + V+ L + + ++
Sbjct: 149 VSEKRRPVIS--FSIYWMVLTLGPILVGSSLAVSSYLGSLNIM----GSDAVNGLLQQSL 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ + + ++L +P K + + G + + + F YI F +Y +
Sbjct: 203 RWLPVMMSTMAFLGLYLLVPNTKVRFHHAVIGAGCASLLFELSKKGFALYITNFPSYQVI 262
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y LA I V++Y+ +LGAE+ AS+
Sbjct: 263 YGALAVIPILFVWVYLCWCIVLLGAEITASL 293
>gi|296113710|ref|YP_003627648.1| putative ribonuclease BN [Moraxella catarrhalis RH4]
gi|295921404|gb|ADG61755.1| putative ribonuclease BN [Moraxella catarrhalis RH4]
gi|326562819|gb|EGE13114.1| putative ribonuclease BN [Moraxella catarrhalis 46P47B1]
gi|326563460|gb|EGE13723.1| putative ribonuclease BN [Moraxella catarrhalis 103P14B1]
gi|326570644|gb|EGE20680.1| putative ribonuclease BN [Moraxella catarrhalis BC7]
gi|326572954|gb|EGE22933.1| putative ribonuclease BN [Moraxella catarrhalis CO72]
gi|326573770|gb|EGE23727.1| putative ribonuclease BN [Moraxella catarrhalis 101P30B1]
gi|326574808|gb|EGE24742.1| putative ribonuclease BN [Moraxella catarrhalis O35E]
Length = 500
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 112/271 (41%), Gaps = 6/271 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAW 70
+ + HF+++D A+ ++ + LL++ P + + + A + V +
Sbjct: 19 LRLLVRHFIDDDTQQKAASLTYTTLLALVPILTVVLVIFSSVPALEGLREQVQQTISANL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
++ + I A + L + + + + + N+ +RV E RS
Sbjct: 79 FPTASEQVAGYIRS-FAEKSSNLGLVGVAGLFVTAIMTLNTIEYAFNKIWRVQE-RSGGA 136
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+I + ++ ++ ++F + ++ ++ + G I ++ +
Sbjct: 137 ASIIRYWTIITLGPVILGVAFGASSAIQSMDFLNRQIAGYGIDWGI---WAYLVSLALMT 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
G I ++ F+P A+ I + I T I + +F + F++Y +Y A++
Sbjct: 194 CGFILLYWFIPKAQVPIKNAAIAGIVTAILFESIKQVFGTVMTNFTSYEAIYGAFAALPI 253
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
L++LY+ +LG +++ ++ I+ ++ P
Sbjct: 254 FLLWLYISWNLILLGVQISYTLTIFDTKEVP 284
>gi|116048875|ref|YP_792324.1| ribonuclease [Pseudomonas aeruginosa UCBPP-PA14]
gi|122257982|sp|Q02IB2|Y5196_PSEAB RecName: Full=UPF0761 membrane protein PA14_51960
gi|115584096|gb|ABJ10111.1| probable ribonuclease [Pseudomonas aeruginosa UCBPP-PA14]
Length = 411
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 10/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
MRE+F + FV + A+ ++ + L +V P + ++ + A H
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ +F + + + + L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSFTTQARH-LTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R G LL L + + A Y+ G L
Sbjct: 120 WRVRQPR-------RGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLSLLHGPDALPGAE 172
Query: 180 GRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ LA + ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 173 TLLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 233 QLIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|107100407|ref|ZP_01364325.1| hypothetical protein PaerPA_01001432 [Pseudomonas aeruginosa PACS2]
gi|254239302|ref|ZP_04932625.1| hypothetical protein PACG_05496 [Pseudomonas aeruginosa C3719]
gi|254245235|ref|ZP_04938557.1| hypothetical protein PA2G_06126 [Pseudomonas aeruginosa 2192]
gi|126171233|gb|EAZ56744.1| hypothetical protein PACG_05496 [Pseudomonas aeruginosa C3719]
gi|126198613|gb|EAZ62676.1| hypothetical protein PA2G_06126 [Pseudomonas aeruginosa 2192]
Length = 411
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 10/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
MRE+F + FV + A+ ++ + L +V P + ++ + A H
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ +F + + + + L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSFTTQARH-LTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R G LL L + + A Y+ G L
Sbjct: 120 WRVRQPR-------RGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLSLLHGPDALPGAE 172
Query: 180 GRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ LA + ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 173 TLLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 233 QLIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|77359142|ref|YP_338717.1| ribonuclease BN [Pseudoalteromonas haloplanktis TAC125]
gi|123588858|sp|Q3IJ43|Y171_PSEHT RecName: Full=UPF0761 membrane protein PSHAa0171
gi|76874053|emb|CAI85274.1| tRNA processing exoribonuclease BN; required for maturation of tRNA
encoded by bacteriophages; dimer [Pseudoalteromonas
haloplanktis TAC125]
Length = 300
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 105/271 (38%), Gaps = 10/271 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWP 71
I +++ A +++ LLS+ P I G + + I+ +F +
Sbjct: 24 MQYINRCIDDQITVNAGYLAYVTLLSLVPLIAVGVAIFSAFPGFESTRLAIESFLFTNFV 83
Query: 72 EVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ I + I + I LAA + + + +LNR +R+ + R I
Sbjct: 84 PTSSDVIKEHISSFAGNANQMTAVGIGFLAAI--ALLLIRNVDATLNRIWRIKKKRPMMI 141
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + + + L V L V I +++ + P LL +
Sbjct: 142 SFAVYWMVLSLGPVFLGGSIAVTSYIVSLVSFADQGIPGFSGFLLKL------LPYGISM 195
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+G I ++ +P + + +PG +F + + + F YI F +Y +Y +A+I
Sbjct: 196 VGFIMLYTLVPNTRVSFKAAIPGALFAAMLFELTKKGFALYISHFPSYEVIYGAVATIPI 255
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
V++Y+ + +LGAEL A + P
Sbjct: 256 LFVWIYLSWIVVLLGAELTACISPENIEDTP 286
>gi|296390694|ref|ZP_06880169.1| ribonuclease [Pseudomonas aeruginosa PAb1]
Length = 411
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 10/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
MRE+F + FV + A+ ++ + L +V P + ++ + A H
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ +F + + + + L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSFTTQARH-LTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R G LL L + + A Y+ G L
Sbjct: 120 WRVRQPR-------RGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLSLLHGPDALPGAE 172
Query: 180 GRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ LA + ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 173 TLLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 233 QLIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|258646090|ref|ZP_05733559.1| YihY family protein [Dialister invisus DSM 15470]
gi|260403466|gb|EEW97013.1| YihY family protein [Dialister invisus DSM 15470]
Length = 283
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 106/272 (38%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I I+ ++++D + AS S +L + PF++F N F A Q I +
Sbjct: 13 FIKCLIKRYIDDDVGSFASEASYCFILGLIPFMIFLVNCILFFAAPQL--DTILDLLQYL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEMRSWY 129
P A + + I +++A + AA + +S G L +++ + + ++SW
Sbjct: 71 PAQFAASMEENIARIIAGRSTIWLFAGLGAAVWTASQGTAVLVRGMDKIFFQDRNIQSWL 130
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLA 188
L + + + +++ + V + V+ + L ++ +W R +
Sbjct: 131 KVSLKACFFTVFLVFAMILSLTLIVFANAVIFLVQDYIMDLPSVFWQVWRPSRYAIPFVV 190
Query: 189 LFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + L + + P +K I+P + + + +YI+ S Y L
Sbjct: 191 MSLSLSAFYRYAPNRYITKWTRIIPASFLVAAALLFLTAGYGYYILHISGMGVTYGSLIG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++++ + G + + R+
Sbjct: 251 LIFLFLWIHLAVQIILAGGAVIMAWEDMRHRR 282
>gi|311105400|ref|YP_003978253.1| ribonuclease BN-like family protein 1 [Achromobacter xylosoxidans
A8]
gi|310760089|gb|ADP15538.1| ribonuclease BN-like family protein 1 [Achromobacter xylosoxidans
A8]
Length = 437
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/261 (16%), Positives = 98/261 (37%), Gaps = 9/261 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF-- 67
++ + E EE +AS ++ + +L++ P + +L Q ++
Sbjct: 30 RVVRFSAERAGEEKLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVALEDFLTN 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ I D + Q A A L I + S + + + N + V R
Sbjct: 90 SLMPPSVSDNIMDYLNQ-FARQASRLTAIGGVFLLITSLLLIMTIDKAFNDIWHVTRQRP 148
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
R + Y + ++ V+ A R+ + ++ + + ++
Sbjct: 149 ---LRQRALVYWAIITLGPVVAGASLWATSFV---ARESLGLVRDVPEALSVAVSFIPLI 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+G + + +P + L G T + + F +Y+ F TY+ +Y A+
Sbjct: 203 LTALGFATLFVMVPNREVLWRDALVGGCVTAVVLEIMKSAFAYYLTRFPTYTVIYGAFAT 262
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
+ L+++Y+ + +LGA L
Sbjct: 263 LPIFLLWIYLSWLAVLLGAIL 283
>gi|15827490|ref|NP_301753.1| integral membrane protein [Mycobacterium leprae TN]
gi|221229967|ref|YP_002503383.1| hypothetical protein MLBr_01017 [Mycobacterium leprae Br4923]
gi|699178|gb|AAA62943.1| u1764d [Mycobacterium leprae]
gi|13093040|emb|CAC31398.1| possible conserved integral membrane protein [Mycobacterium leprae]
gi|219933074|emb|CAR71112.1| possible conserved integral membrane protein [Mycobacterium leprae
Br4923]
Length = 330
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 106/282 (37%), Gaps = 13/282 (4%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG---AHQFVPTVI 63
++ I + ++ ++ ++ + + LS+ P ++ ++ +PT+
Sbjct: 12 HIWRISLRTLSKSWDDSIFSESAQAAFWSALSLPPLVLGMLGSLAYVAPLFGEDTLPTIE 71
Query: 64 DVVFGAW-----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V P V+ + I I V + ++ L + + S+ + A ++ +
Sbjct: 72 RRVISMAHSFFSPSVVNEIIEPTISDVNNGARGEVVSLGFLISLWAGSSAISAFVDAVVK 131
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
A+ +R RL + + +V + + V P + + + ++
Sbjct: 132 AHDQTLLRHPVKQRLFALFLYIAMLAFVVATAPLVVVGPRKVTKLIPH-----SWANMLH 186
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G A +++L + ++ ++ ++ G I +V+ + Y+ +
Sbjct: 187 LGYYPAVIVSLLVAVMILYRVALPIPLPTHRLVFGAILATAVFVITTLGLRIYLKWITGT 246
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y L + + L+F + G +LGAE NAS+ + K
Sbjct: 247 GYTYGALTTPIAFLLFAFFGGFAIMLGAEFNASIQEKFPAPK 288
>gi|218893079|ref|YP_002441948.1| putative ribonuclease [Pseudomonas aeruginosa LESB58]
gi|226737450|sp|B7UXY2|Y4364_PSEA8 RecName: Full=UPF0761 membrane protein PLES_43641
gi|218773307|emb|CAW29119.1| probable ribonuclease [Pseudomonas aeruginosa LESB58]
Length = 411
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 10/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
MRE+F + FV + A+ ++ + L +V P + ++ + A H
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ +F + + + + L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSFTTQARH-LTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R G LL L + + A Y+ G L
Sbjct: 120 WRVRQPR-------RGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLSLLHGPDALPGAE 172
Query: 180 GRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ LA + ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 173 TLLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 233 QLIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|289583130|ref|YP_003481596.1| ribonuclease BN [Natrialba magadii ATCC 43099]
gi|289532683|gb|ADD07034.1| ribonuclease BN [Natrialba magadii ATCC 43099]
Length = 378
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 94/258 (36%), Gaps = 15/258 (5%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ E++ MA+ I+ A +S+ P +V + LG QF V PE
Sbjct: 13 KTVVAGIQEKNVPFMAAGIAYQAFISLLPLLVLIFFVVTILGDEQFASQVATSTGEFLPE 72
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ D I + A L I + + + L + + Y S+ + +
Sbjct: 73 SGQMMVEDAIAESPATAGSTL--IGVVVLVWGALKIFRGLDTAFSEIYEAGGTGSF-VQQ 129
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L G VL A + L A A + + ++ L I
Sbjct: 130 LRDAGLVLGA-----------IGGALIAASAASLLLAFFPDIPFLGLVSPLILVVILSIA 178
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ + + P +LPGV+ I W V LF Y+ F+ S + +++ L
Sbjct: 179 FLPMFYYFPDVDVTAREVLPGVVVAAIGWTVLQSLFHVYVS-FAGDSEAAGPVGAVLLLL 237
Query: 253 VFLYMLGVFFILGAELNA 270
+LY G+ ++GA +NA
Sbjct: 238 TWLYFGGLILLVGAVINA 255
>gi|161521142|ref|YP_001584569.1| ribonuclease BN [Burkholderia multivorans ATCC 17616]
gi|160345192|gb|ABX18277.1| ribonuclease BN [Burkholderia multivorans ATCC 17616]
Length = 341
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 105/265 (39%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + +MA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 39 AFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 98
Query: 74 IAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR----- 126
A I + A G+ T+ + AA +S +L +LN + E R
Sbjct: 99 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVL 158
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RL+SFG VL + L++ + A+ ++ + +++ ++ +
Sbjct: 159 GLVRVRLVSFGLVLGVAFLLIVSLVL----DTAITFIGTWLLGDSPYVVVTNVLQLVVGV 214
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + FLP A+ G I + I + G LF Y+ T ++ +
Sbjct: 215 AVLAGAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLFALYLARAGT-ASAFGAAG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY + +LGAE +A+
Sbjct: 274 SFAVLLMWLYFSALVLLLGAEFSAA 298
>gi|56461547|ref|YP_156828.1| ribonuclease BN [Idiomarina loihiensis L2TR]
gi|67460627|sp|Q5QV33|Y2447_IDILO RecName: Full=UPF0761 membrane protein IL2447
gi|56180557|gb|AAV83279.1| Ribonuclease BN [Idiomarina loihiensis L2TR]
Length = 284
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 108/276 (39%), Gaps = 8/276 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVP 60
+ YF + + F ++ A H++ ++LS+ P +V + +
Sbjct: 7 KSYFNHTLGFLKYFGQRFNSDNTNITAGHLTYVSMLSLVPLLVVMFTVFSAFPMFDELKE 66
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + + + + + + +K + I + + A+ +LN +
Sbjct: 67 NLEQALFANLLPTSGEQLEEYLNEFVTNASK-MTAIGVGFLFIVAIMLMSAIDKALNSIW 125
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R W ++ + + + L V + + + ++ + + +L
Sbjct: 126 RDSSSRHWLVSFAVYWMLLTLGPVLIGSGLAATSYLMSLSQFADEYVSGIQSFVL----- 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ F+ + ++ +P + K G + + + + LF+ YI F TY
Sbjct: 181 -WFVPIVTSFVFFVLMYQLVPNRQVKFRYAAFGAVIAALLFELSKQLFSLYITFFPTYQA 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y LA+I +V++Y+ + ++GA L S+ Y
Sbjct: 240 IYGALATIPILIVWIYLSWLIVLIGAVLTVSLEEYQ 275
>gi|221212501|ref|ZP_03585478.1| ribonuclease BN [Burkholderia multivorans CGD1]
gi|221167600|gb|EEE00070.1| ribonuclease BN [Burkholderia multivorans CGD1]
Length = 336
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 105/265 (39%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + +MA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 39 AFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 98
Query: 74 IAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR----- 126
A I + A G+ T+ + AA +S +L +LN + E R
Sbjct: 99 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVL 158
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RL+SFG VL + L++ + A+ ++ + +++ ++ +
Sbjct: 159 GLVRVRLVSFGLVLGVAFLLIVSLVL----DTAITFIGTWLLGDSPYVVVTNVLQLVVGV 214
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + FLP A+ G I + I + G LF Y+ T ++ +
Sbjct: 215 AVLAGAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLFALYLARAGT-ASAFGAAG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY + +LGAE +A+
Sbjct: 274 SFAVLLMWLYFSALVLLLGAEFSAA 298
>gi|260461418|ref|ZP_05809666.1| ribonuclease BN [Mesorhizobium opportunistum WSM2075]
gi|259032955|gb|EEW34218.1| ribonuclease BN [Mesorhizobium opportunistum WSM2075]
Length = 342
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 110/279 (39%), Gaps = 10/279 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV-VF 67
+ ++ +++ +V ++ + + I+ A S+ P ++ +AG + + +
Sbjct: 16 WLLLKESVSGYVNDNALSHGAAIAFYAATSLAPIVLIVVAIAGIVVGNDAAQLALSAEFA 75
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVVEM- 125
G A + I + L T+ L A +++GV +++SLN+ ++V
Sbjct: 76 GVMGPQSADLLKATIETASHRGSSTLATLIGLMALLVTASGVFGEMQLSLNQIWKVRPNG 135
Query: 126 ---RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R S G V L++ AI A + + P LI+
Sbjct: 136 VSLSRLVRARAASLGLVAALGFMLLVSLAASTAISALGAVINQHLPFGE---LIVSAINT 192
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + + ++ LP K + G + T + + +G L YI T S +T Y
Sbjct: 193 IVSFVLIALLFSAIYKVLPDRTLKWRDVAVGSLVTALLFTIGKSLIGWYIGT-SAIATSY 251
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++M L+++Y F+ GAE+ + + ++
Sbjct: 252 GAAGALMVVLLWVYYSAQIFLFGAEITRAYSVLSGSRQD 290
>gi|182436950|ref|YP_001824669.1| putative ribonuclease BN [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326777560|ref|ZP_08236825.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
gi|178465466|dbj|BAG19986.1| putative ribonuclease BN [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326657893|gb|EGE42739.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
Length = 317
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 96/275 (34%), Gaps = 4/275 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA F DG++ A ++L +L++ P ++ L+ L + G
Sbjct: 33 WPLVRDAFVRFRYADGFSHARALALQTILAIIPLVIAFVGLSAELHTESVGRLAELTIHG 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG---LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A+ + D + + G + + + + + NR Y V
Sbjct: 93 ISEGPSAEVVDDALDRHRRSDGDGPEVALWLGLAFSLANVTTAMCQIERGANRIYGVERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ L L A + L I S + VA +A + + R
Sbjct: 153 RVFHHKYLRGLVMALSAGIPLGIGSVMMVAGGDLVAAAASVYGLGDTARETLTLLRWPLG 212
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L I + P + + L G + W V L + Y+ ++ T+Y
Sbjct: 213 FLLALISASAIFRRSPRRRQPGYTWLAFGAAVYLVLWTVLTWLLSLYLGFSGSFDTVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++ M+ L++ Y+ +G A + R+
Sbjct: 273 LSAFMSLLLWAYLTSTALFVGLSFAAQLEAVRARR 307
>gi|152987671|ref|YP_001349907.1| ribonuclease [Pseudomonas aeruginosa PA7]
gi|166918690|sp|A6VA22|Y4558_PSEA7 RecName: Full=UPF0761 membrane protein PSPA7_4558
gi|150962829|gb|ABR84854.1| probable ribonuclease [Pseudomonas aeruginosa PA7]
Length = 411
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 10/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
MRE+F + FV + A+ ++ + L +V P + ++ + A H
Sbjct: 1 MREHFNDGIEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ +F + + + + L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSFTTQARH-LTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R G LL L + + A Y+ G L
Sbjct: 120 WRVRQPR-------RGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLSLLHGPDALPGAE 172
Query: 180 GRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ LA + ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 173 TLLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGMFTAVLFEAAKTLFGLYVSLFPGY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 233 QLIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|320007152|gb|ADW02002.1| ribonuclease BN [Streptomyces flavogriseus ATCC 33331]
Length = 317
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 96/275 (34%), Gaps = 4/275 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG++ + ++L +L+V P ++ L+ L +
Sbjct: 33 WPLLRDSFVRFRYADGFSHSRALALQTVLAVVPLVIAFVGLSTALHTENLGRVAELTIQR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A+ + D + + G + + ++ + + NR Y V
Sbjct: 93 ITAGPSAEVVEDALDRSRRRADDGAQLALWFGLVFSLTNTTTAMCQIERGANRIYGVERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ L L A + L I VA +A V + R A
Sbjct: 153 RVFHRKYLRGLVMSLTAGIPLGIGFVAMVAGGDLVAAVVDVYDLGAGARSAWDMLRWPAG 212
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + + P + + L G + W L + Y+ ++ T+Y
Sbjct: 213 VLLVILSASAIFRRSPRRRQPGYTWLAFGAAVYLVLWTTLTWLLSLYLEVSGSFDTVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L + M+ L++ Y+ + LG A + ++
Sbjct: 273 LTAFMSLLLWAYLTSIALFLGLSFAAQLEAVRAKR 307
>gi|187478768|ref|YP_786792.1| membrane-associated ribonuclease [Bordetella avium 197N]
gi|115423354|emb|CAJ49888.1| putative membrane-associated ribonuclease [Bordetella avium 197N]
Length = 438
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 101/280 (36%), Gaps = 9/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A+ +E +AS ++ + +L++ P + G +L Q
Sbjct: 17 RSWLERLARAFRFALSRADKERLLEVASSLTFTTVLAIVPMLAVGLSLFTAFPVFQDFRL 76
Query: 62 VIDVVF--GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ P ++ I D + Q A A L I S + + + N
Sbjct: 77 ALEDFLANNLMPPEVSDNIMDYLNQ-FARQASRLTAIGGAFLVVTSLLLIMTIDKTFNDI 135
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V R W L+ + + L V + + R+ + ++ I+
Sbjct: 136 WHVGRQRPWPQRALVYWAVLTLGPVATGASLWATSFV------ARESMGLISDVPEIVSL 189
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G +L +G + + +P + L G T + F Y+ F Y+
Sbjct: 190 GISLVPLLLTGLGFSALFVVVPNCRVYWRDALTGGFCTAFALEAMKAGFALYLNRFPAYT 249
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y A++ L+++Y+ + +LGA + A++ +
Sbjct: 250 VIYGAFATLPIFLLWIYLSWLAVLLGASIAANVPRVRLGR 289
>gi|311695820|gb|ADP98693.1| ribonuclease BN [marine bacterium HP15]
Length = 453
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 102/259 (39%), Gaps = 2/259 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
Y + A + + LLS+ P + ++ LG HQ + + F
Sbjct: 37 RTAYAMARDVLSGQLTLHAMSLVYTTLLSIVPLLALSFSVLKALGVHQRMEPFLFQFFEP 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ V + L ++ Y + ++ + S N +RV +MRS
Sbjct: 97 LGPQGIDLAEQILGFVDNMKVGVLGSVGLALLVYTVVSLLQKIERSFNMIWRVPDMRS-- 154
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + S ++ L+++S + V+ + + + + + +I + +
Sbjct: 155 MAQRFSNYLSVIMVGPLLMVSAIGVSATIFSSTIVQKLIEIEPFGSVILVASRFTPFFLV 214
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FV++F+P + K+ G + +SW +LF ++ + Y+ +Y+ A +
Sbjct: 215 VGAFTFVYVFMPNTRVKLRYAAIGGLVAGVSWQAAGMLFASFVAGSAKYAAIYSSFAIGI 274
Query: 250 TCLVFLYMLGVFFILGAEL 268
L+++Y+ + +LGA +
Sbjct: 275 ILLIWIYLNWMILLLGASI 293
>gi|300114145|ref|YP_003760720.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299540082|gb|ADJ28399.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 455
Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 105/267 (39%), Gaps = 2/267 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +Y F + D A+ + + LLS+ P + ++ G H +
Sbjct: 28 RAFLRQKAKFVYAVSREFFKGDLTLQATSLVYTTLLSLAPLLAVSFSVLKAFGIHNEIEP 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ + T I V + L ++ Y + ++ + + N +R
Sbjct: 88 VLHHFLLPLGPRGEEITTKIIQYVENLKVGVLGSVGVGLLFYTVISLIQKVEGAFNHVWR 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + R + VLL LV + A + ++++ L +
Sbjct: 148 IKAERPF-ARRFSDYLSVLLIGPVLVFSAVGATASVMQTSFIQTLLDF-ELLGKTLVVMS 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + G F++LFLP K ++ S L G I W +LF ++ T + Y +
Sbjct: 206 KLLPYLLVIAGFTFIYLFLPNTKVRLGSALVGGAVAGILWETIGILFAFFVTTSTKYDAI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ A ++ +++LY+ + ++GA++
Sbjct: 266 YSSFAIVILFMIWLYISWLVLLVGAQV 292
>gi|315125295|ref|YP_004067298.1| ribonuclease BN [Pseudoalteromonas sp. SM9913]
gi|315013808|gb|ADT67146.1| ribonuclease BN [Pseudoalteromonas sp. SM9913]
Length = 293
Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 106/271 (39%), Gaps = 10/271 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWP 71
+++ A +++ LLS+ P I G + + I+ +F +
Sbjct: 24 MQYFNRCIDDQITINAGYLAYVTLLSLVPLIAVGVAIFSAFPGFESTRLAIESFLFTNFV 83
Query: 72 EVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ I + I + + I LAA + + + +LNR +RV + R I
Sbjct: 84 PTSSGVIKEHISSFASNANQMTAVGIGFLAAI--ALLLIRNVDATLNRIWRVKKKRPMMI 141
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + + + L V L V I +++ + P LL +
Sbjct: 142 SFAVYWMVLSLGPVLLGASIGVTSYIVSLVSFADQGIPGFSGFLLKL------LPYAISM 195
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
G I ++ +P + + +PG +F + + + F YI F +Y +Y +A+I
Sbjct: 196 AGFIMLYTLVPNTRVSFKAAVPGALFAAMLFELTKKGFALYISHFPSYEVIYGAVATIPI 255
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
V++Y+ V +LGAE + + ++ KK
Sbjct: 256 LFVWVYLSWVVVLLGAEFTVCINMQHYNKKD 286
>gi|15596148|ref|NP_249642.1| ribonuclease [Pseudomonas aeruginosa PAO1]
gi|32699648|sp|Q9I507|Y951_PSEAE RecName: Full=UPF0761 membrane protein PA0951
gi|9946857|gb|AAG04340.1|AE004529_6 probable ribonuclease [Pseudomonas aeruginosa PAO1]
Length = 411
Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 10/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
MRE+F + FV + A+ ++ + L +V P + ++ + A H
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ +F + + + + L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSFTTQARH-LTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R G LL L + + A Y+ G L
Sbjct: 120 WRVRQPR-------RGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLSLLHGPDALPGAE 172
Query: 180 GRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ LA + ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 173 TLLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 233 QLIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|91777652|ref|YP_552860.1| ribonuclease BN [Burkholderia xenovorans LB400]
gi|91690312|gb|ABE33510.1| Ribonuclease BN [Burkholderia xenovorans LB400]
Length = 324
Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 103/280 (36%), Gaps = 13/280 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R +F I +A+ F + +A+ IS A S+ P ++ + G F G
Sbjct: 31 RRRSGSIFHIAVEAVSRFASDRCTTLAASISFYAAFSLAPTLLIVLTVTGWFFGEAAARG 90
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRA 119
+ V A + + GL + S + +S +L +L+
Sbjct: 91 KLFAQVHDILGNDAAGAMQAVVESAHRASGGGLAALLSIVLLVIGASATFSSLNTALDVV 150
Query: 120 YRVVEMRSW------YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ RLISFG VL LV+ + A+ +V + L
Sbjct: 151 FAAKPKAGLAGLALLVRARLISFGLVLGVGFLLVVSLVL----DTAITFVGQRLFGESPL 206
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ + ++ L + +LP + G I + + + VG LF Y+
Sbjct: 207 VIAAQIAQTVFGIVVLSAAFTAMLRWLPDTHVPFRHAMTGAIVSAVLFSVGRRLFGLYLA 266
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
T ++ + S+ +++LY F+LGAE+ ++M
Sbjct: 267 HAGTANS-FGAAGSLAVLMLWLYFSAAVFLLGAEVASAMD 305
>gi|120555963|ref|YP_960314.1| putative ribonuclease BN [Marinobacter aquaeolei VT8]
gi|120325812|gb|ABM20127.1| tRNA-processing RNAse BN [Marinobacter aquaeolei VT8]
Length = 451
Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/256 (19%), Positives = 104/256 (40%), Gaps = 2/256 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
Y I + A + + LLS+ P + ++ LG HQ + + F
Sbjct: 40 YALIRDVISGQLTLHAMSLVYTTLLSIVPLLALSFSVLKALGVHQRMEPFLYQFFQPMGP 99
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + V + L ++ Y + V+ + S N +RV EMRS + +
Sbjct: 100 QGVEVAERILGFVDNMKVGVLGSVGLALLVYTVISLVQKIERSFNMIWRVPEMRS--MAQ 157
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
S ++ L+++S + V + + + + A+ +I + +
Sbjct: 158 RFSNYLSVIMVGPLLMVSAIGVTATIFSSEIAQNLMAIEPFGSLIVLASRFTPFFLVVGA 217
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
FV++F+P + K+ + +SW G +LF ++ + Y+ +Y+G A + L
Sbjct: 218 FTFVYIFIPNTRVKLRYAFIAGLVAGVSWQAGGMLFASFVAGSAKYAAIYSGFAVGIILL 277
Query: 253 VFLYMLGVFFILGAEL 268
++ Y+ + +LGA L
Sbjct: 278 IWTYLNWMILLLGASL 293
>gi|172036709|ref|YP_001803210.1| ribonuclease BN [Cyanothece sp. ATCC 51142]
gi|171698163|gb|ACB51144.1| probable ribonuclease BN [Cyanothece sp. ATCC 51142]
Length = 293
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/283 (16%), Positives = 113/283 (39%), Gaps = 11/283 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
++ ++ + + + ++D ++A+ ++ +S+ P ++ ++AG G +
Sbjct: 2 NIRVLIKLLKETFKEWQQDDASSLAASLAYYTSVSLAPLLIIVISIAGAVFGEEAARGEI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
+ + G A+ I I +I ++ F ++GV A L+ SLN+ ++
Sbjct: 62 VSQIQGLVGTNGAELIETAIENADQPQISNFASIISIIILLFGASGVFAQLQKSLNKVWQ 121
Query: 122 VVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V ++ R++SF +L L++ + A+ Y+ P + L +
Sbjct: 122 VQVKSEEGWKNLIRKRILSFSAILGLGFLLLVSLIISAALSGLNHYLSDIIPGIDFLWQV 181
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + + ++ +LP K + G I T + + +G Y+
Sbjct: 182 LD---FCLSFVVIALVFGLMYRYLPDVKISWDDVKIGAIITALLFTIGKFALGLYLGR-G 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++Y S++ LV++Y GAE Y K
Sbjct: 238 GFGSVYGAAGSLVIILVWVYYSAQILFFGAEFTQVYARRYGSK 280
>gi|83644372|ref|YP_432807.1| ribonuclease BN-like family protein [Hahella chejuensis KCTC 2396]
gi|83632415|gb|ABC28382.1| ribonuclease BN-like family protein [Hahella chejuensis KCTC 2396]
Length = 455
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 103/264 (39%), Gaps = 2/264 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+++ + + A + + LLS+ P + ++ G H + +
Sbjct: 31 RVLWHSARVLFAVVRDVLFGHVTLHAMGLVYTTLLSIVPLLALSFSVLKGFGVHNQLEPL 90
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ VF A+ E + + + + V V L ++ Y + V+ + S N +RV
Sbjct: 91 LENVFQAFGEKGPELVQNVLAFVDNVKVGVLGSVGLGLLIYTVISLVQKVERSFNEIWRV 150
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
++RS R S+ V++ L + A + + + +
Sbjct: 151 SQIRS-LAQRFSSYLSVIVVGPLLAFSAMGATATLVGTDMAQTVLS-IEPFGRLFSLATR 208
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A + + F++ F+P K + G + I+W +F ++V S Y +Y
Sbjct: 209 MAPYVIIVALFTFMYRFIPNTKVRTRYAFIGGLGAGIAWQTTGYVFAKFVVGTSNYEAIY 268
Query: 243 AGLASIMTCLVFLYMLGVFFILGA 266
+G A + L++LY+ + ++GA
Sbjct: 269 SGFAVGILVLIWLYISWLILLMGA 292
>gi|186476333|ref|YP_001857803.1| ribonuclease BN [Burkholderia phymatum STM815]
gi|184192792|gb|ACC70757.1| ribonuclease BN [Burkholderia phymatum STM815]
Length = 439
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 105/278 (37%), Gaps = 7/278 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R + + A + E+ +A ++ + +LS+ P L
Sbjct: 5 LRLDLDTLKRLAEFAAKRSGEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFAQFQ 64
Query: 61 TVIDVVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ P+ ++ I + Q A AKGL T+ + S + + + N
Sbjct: 65 VSLQTFLAEHLMPDQVSSQIFRYLNQ-FASKAKGLTTLGMIILFVTSVMTMMTVESAFNV 123
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV + R + R++++ +L L+ +S + + + L+
Sbjct: 124 IWRVRKARPF-AQRVLAYWAILTLGPILIGVSLSISSYLFTQSMTYTAAQRITPLIEWAL 182
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G AT+ + +++FLP + + + G + I++ + F YI TY
Sbjct: 183 AG---ATLPLTVLAFTMLYVFLPNCRVEWRDAIVGGVTAAIAFELAKRGFGFYIRRIPTY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +Y A + L+++Y+ + GA + +++
Sbjct: 240 TAVYGAFAVVPLFLLWMYLSWFITLAGAMIASALPAIR 277
>gi|255027017|ref|ZP_05299003.1| transport protein [Listeria monocytogenes FSL J2-003]
Length = 141
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 66/133 (49%)
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
+ V ++ + L N R T++ +F+ F++ P +S +
Sbjct: 4 ATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLYWVAPNRRSTL 63
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y+ G+ ++G E
Sbjct: 64 ISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYLTGIILMIGGE 123
Query: 268 LNASMIIYYWRKK 280
LNA++ I +K+
Sbjct: 124 LNATLAIRKKKKE 136
>gi|146308010|ref|YP_001188475.1| tRNA-processing RNAse BN [Pseudomonas mendocina ymp]
gi|166918691|sp|A4XWM7|Y2988_PSEMY RecName: Full=UPF0761 membrane protein Pmen_2988
gi|145576211|gb|ABP85743.1| tRNA-processing RNAse BN [Pseudomonas mendocina ymp]
Length = 405
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 108/284 (38%), Gaps = 11/284 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + F+E G A+ ++ + L +V P + + + A Q V
Sbjct: 1 MHRRLKDWLGFWLSLYQRFIENRGAGNAAALTYTTLFAVVPMMTVTFAMLSAIPAFQGVG 60
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I +F + + + + + + A + L A + + + + N
Sbjct: 61 EEIQGFIFNNFVPSTGETVQEYLREFTAQARQ-LTWFGVGLLAVTAFLMLVTIEKTFNVI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R R +S + A ++L + A Y+ G ++
Sbjct: 120 WRVRQPR-----RGMSSFLLYWAILSL--GPLLLGAGFAVSTYIASLSLISGPDAVVGAK 172
Query: 180 GRI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +L+ ++ +P + + L G +F+ I + + LF Y+ F Y
Sbjct: 173 TLLAFTPLLSSIAAFTLLYAAVPNTRVPLRHALLGGLFSAILFEIAKALFGLYVRLFPGY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM-IIYYWRKKP 281
+Y A++ LV++Y+ + +LGAEL + WR++P
Sbjct: 233 HLIYGAFATVPLFLVWIYLSWLIVLLGAELVYGLSQPRRWRRQP 276
>gi|172040451|ref|YP_001800165.1| hypothetical protein cur_0771 [Corynebacterium urealyticum DSM
7109]
gi|171851755|emb|CAQ04731.1| putative membrane protein [Corynebacterium urealyticum DSM 7109]
Length = 379
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 96/284 (33%), Gaps = 18/284 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
I F + +S ++ + P ++ + + Q + + +
Sbjct: 49 IAKRLYAEFFYRGLPDKGATLSFYSIFTAIPTLMAFYAIVMLVLDQNRDQVLGVTGEFIN 108
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P A ++ I ++ + L T I+ L A + SS V A S N Y E
Sbjct: 109 RNIPADFATQASNIIEAIIGTTQRSLITLIIAVLFALFSSSAYVRAFSRSANALYGREEG 168
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP----------ALGNLLL 175
RS T L+ +G + LV+++ F L+ + + L
Sbjct: 169 RSILRTWLVMWGLTIALVAGLVLIAAGFFLREDLLSPFFTHIADPLGLAGLRTFMLDYFL 228
Query: 176 IIWNGRIYATMLALF-IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
+W + + L + + ++ P K + G + + + V F Y+
Sbjct: 229 PLWTLLRWPVIFGLSQMLIALLYHVAPNVKQGRFRLFTAGSVSALVVLTLLGVGFRTYLN 288
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F MY L I+ L+M +LG +L+A +
Sbjct: 289 NFLH-VGMYGALGGIIGGFFCLFMANNVLLLGLQLDAELARARE 331
>gi|302557583|ref|ZP_07309925.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
gi|302475201|gb|EFL38294.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length = 304
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 102/263 (38%), Gaps = 14/263 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVIDVVFGAWPE 72
+E +A+ + LLSV P ++ L G++ ++D +
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLSMIGLLGYVDDWTGADTIQSLQRNLLDASRTVLSD 60
Query: 73 -VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+++ + V + ++ L A + S V ++ Y + +R T
Sbjct: 61 RGVSQIAEPILRDVTKGGRPDVISLGFLIAVWSGSRAVNVFIETITVMYGLDGVRGIVKT 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RL++F ++A + I + VA P A+ + + ++ ++
Sbjct: 121 RLLAFLLFIVALLIGSIALPLMVAGPDAVVEIVPWS------TTVVQILYWPVVLVLSVA 174
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ +S + +PG + WV+G+ L Y+ T+Y LA+ +
Sbjct: 175 FLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRIYLTNTVEGPTIYGSLAAPVAV 234
Query: 252 LVFLYMLGVFFILGAELNASMII 274
L+++ + ++GA +NA++
Sbjct: 235 LLWIGVSAFAVLVGAAVNAAIDR 257
>gi|126453311|ref|YP_001065978.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1106a]
gi|167846011|ref|ZP_02471519.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei B7210]
gi|242317688|ref|ZP_04816704.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1106b]
gi|126226953|gb|ABN90493.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1106a]
gi|242140927|gb|EES27329.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1106b]
Length = 437
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 103/275 (37%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A ++ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 182 AAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++LY+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|160900398|ref|YP_001565980.1| ribonuclease BN [Delftia acidovorans SPH-1]
gi|160365982|gb|ABX37595.1| ribonuclease BN [Delftia acidovorans SPH-1]
Length = 448
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + +L++ PF L V V++ ++ PE I
Sbjct: 61 ERFREDRLGVTASSLTFTTVLALVPFFTVALALFTAFPIFSRVQIVLERWLIDSLIPETI 120
Query: 75 AKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + + Q + ++ G+ S L + + + +LN +RV ++R L
Sbjct: 121 ARQVLGYLTQFASKASQLGMAGFSIL--VITAVALILTIDRTLNNIWRVRQLRPLGQRVL 178
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I Y ++ +++ V ++ R AL L I++ Y LAL G+
Sbjct: 179 I---YWAAITLGPLVLGLSLVLSSYVMSASRGLVNALPEGLRFIFDSIEY---LALAAGM 232
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ ++P + G +F + Y+ + TYS +Y A++ L+
Sbjct: 233 AGLYHYVPNTAVRWRHAWVGGLFVATCMELAKKALGLYLASVPTYSVIYGTFATLPILLI 292
Query: 254 FLYMLGVFFILGAELNASMII 274
++YM + +LGA + A + I
Sbjct: 293 WIYMAWIIVLLGAVVTAYLPI 313
>gi|330466601|ref|YP_004404344.1| ribonuclease bn [Verrucosispora maris AB-18-032]
gi|328809572|gb|AEB43744.1| ribonuclease bn [Verrucosispora maris AB-18-032]
Length = 338
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 44/277 (15%), Positives = 96/277 (34%), Gaps = 10/277 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA F DG++ + + L+V PF++ L LGA + V D V
Sbjct: 33 WHLLRDAFTRFRYGDGFSHSRAFAFQLCLAVVPFLIALTGLIAELGAAEGGEVVADTVLA 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-------FTISALAAAYFSSNGVEALRISLNRAYR 121
P + + + + A+ T+ + ++ + + NR Y
Sbjct: 93 LTPGASEQVVAELLGDGEGAGAERAEDIGEVALTLGLMTGLVALTSTMAQIERGANRIYG 152
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-G 180
V R L + + A + + + V V++ + G++ W+
Sbjct: 153 VERDRPALRKYLRAAVLAVTAGLPALAGFVILVGGGPMGDSVQRHYAW-GDVAATGWDVI 211
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
R ++ + + + P + + G + W + ++L Y+ + +
Sbjct: 212 RWPLSLGLTVLAVAVLFRHAPRRHQPGLSWLFFGAGIATVLWWLASLLLAGYVRFSADFG 271
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L IM L++ + G+ G A +
Sbjct: 272 QTYGALTGIMALLLWANLTGMALFGGLAFAAQLEAVR 308
>gi|254422463|ref|ZP_05036181.1| YihY family protein [Synechococcus sp. PCC 7335]
gi|196189952|gb|EDX84916.1| YihY family protein [Synechococcus sp. PCC 7335]
Length = 341
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 99/269 (36%), Gaps = 11/269 (4%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDV 65
I++ ++ + + + +A+ ++ ++ P ++ +A FL V + +++
Sbjct: 5 ILWSLLKQTVAEWQRDKVSRLAAALAYYTTFALAPILIIAIAIASFLFEQSAVQSRILEQ 64
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVE 124
+ E A I + + TI ++ ++G L+ +LN + VV
Sbjct: 65 IQSLLGENAAGLIEEMLTSRSTSDGGFWATIISVGLLILGASGLFVQLQDALNTVWNVVA 124
Query: 125 MR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ RL+SFG V+ L++ V + + P I+
Sbjct: 125 RKDEGIWGLVRDRLLSFGMVVAIGFLLMVSLIVSAGLSAVSGMFGELLPGWDLAWQILNT 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + + V+ LP + + G T + +G L YI S+ +
Sbjct: 185 A---FSFGVITLLFAMVYKVLPDVRIAWSDVWTGAAITAFLFTIGKALIGLYIGN-SSVA 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ Y S + L+++Y + GAE
Sbjct: 241 SAYGAAGSFVVLLLWIYYSSQILLFGAEF 269
>gi|167824475|ref|ZP_02455946.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 9]
gi|167911227|ref|ZP_02498318.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 112]
gi|226192934|ref|ZP_03788546.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei Pakistan
9]
gi|254198157|ref|ZP_04904579.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei S13]
gi|254297859|ref|ZP_04965312.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 406e]
gi|157807649|gb|EDO84819.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 406e]
gi|169654898|gb|EDS87591.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei S13]
gi|225935024|gb|EEH30999.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei Pakistan
9]
Length = 437
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 103/275 (37%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A ++ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 182 AAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++LY+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|167719878|ref|ZP_02403114.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei DM98]
Length = 437
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 103/275 (37%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A ++ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSMSSYLFTKSLAIAGSTSTPPVFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 182 AAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++LY+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|163795887|ref|ZP_02189851.1| probable ribonuclease [alpha proteobacterium BAL199]
gi|159178920|gb|EDP63456.1| probable ribonuclease [alpha proteobacterium BAL199]
Length = 443
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 104/272 (38%), Gaps = 11/272 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV-FGAWPEV 73
A+ F + G A+ ++ + LL++ P + + A Q V I+++ F
Sbjct: 12 AVRRFYRDGGLQAAAALTYTTLLALVPLMTIAFAIFSAFPAFQAVQYQIELLLFQNLVPE 71
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I I + A L T+ +A A + + + NR +RV R +TRL
Sbjct: 72 VGSIIQSHISE-FTRNATNLTTVGVVALAVSAVLLLSTVESVFNRIWRVERERP-ILTRL 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT------ML 187
+ F VL L+ SF ++ +F L I G +
Sbjct: 130 LIFWTVLTLGPVLMGASFTLTTG--VFDWIGQFANESVGLAPISLEGDRWVIGGRLLAAA 187
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + +PA ++ G ++ + +F Y+V F +Y +Y LA+
Sbjct: 188 LQATAFTILFVLVPARPVRLRDAAVGGAIAGVALEILKWVFRLYVVGFPSYQAIYGALAA 247
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L++LY+ I+GA AS + +
Sbjct: 248 VPIFLIWLYLSWTVIIMGAVFAASFSEWRSAR 279
>gi|149279126|ref|ZP_01885259.1| hypothetical protein PBAL39_07500 [Pedobacter sp. BAL39]
gi|149230128|gb|EDM35514.1| hypothetical protein PBAL39_07500 [Pedobacter sp. BAL39]
Length = 315
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 52/283 (18%), Positives = 111/283 (39%), Gaps = 10/283 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
+ F +++++ +A F + ++ ++ + S+ P +V +L G FLG
Sbjct: 7 KITFKGIWEVLKNAFTGFSDHKVTKLSGSLAYYTVFSMAPLLVVIISLCGIFLGQEAAQG 66
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRA 119
+ + G A + + I + + + + S V A ++ S+N
Sbjct: 67 QIYSQLSGFLGPDTAAQLQEIIKKASLGDKSTVAFVIGVVTLLVGSTTVFADIQDSINTI 126
Query: 120 YRV--VEMRSWYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ + R W R +SF ++ L++ + + ++ F + +
Sbjct: 127 WGLKPKPKRGWLKLLQNRFLSFSVIISLGFILLVSLGITALLDGFSERLQARFSDISVIF 186
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I N I +++L G+IF LP A K ++ G I T + +++G + YI
Sbjct: 187 FYILNQVITLAVISLIFGVIF--RVLPDAIIKWKDVILGSIVTAVLFMIGKFGISIYIGQ 244
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S + Y S++ L++ Y + GAE + + Y
Sbjct: 245 -SDVGSTYGAAGSLVIVLLWTYYSSIILYFGAEFTKAYAMAYG 286
>gi|196230042|ref|ZP_03128905.1| ribonuclease BN [Chthoniobacter flavus Ellin428]
gi|196225639|gb|EDY20146.1| ribonuclease BN [Chthoniobacter flavus Ellin428]
Length = 405
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 99/276 (35%), Gaps = 6/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVV 66
+ + + + + +++ ++ ++ SV P +V +AG F G + D +
Sbjct: 1 MLTLFKRTASAWSDANALRLSAALAYYSIFSVAPLLVLAVGVAGWFFGTKAMTGQLQDDL 60
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVE 124
A I + + P+ + +I + +S L+ +LN + V
Sbjct: 61 RELMGGRAADFIQSMVQS-ASQPSTSFWATSIGLVTLLIGASGVFGQLKDALNSIWSVKV 119
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IY 183
+ + V + + V + L ++ A+ L IW G +
Sbjct: 120 KSGGWKVYVRQELLSFGMVVVIGFLLLVSFILTTLLNAFSRWVEAILRLPSWIWGGAGVL 179
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+++ + + + LP K + G FT + + G +Y+ ++ ++ +
Sbjct: 180 LSLVVVTLLFALIFKVLPDVKIHWRDVWAGAAFTAVLFEAGKFGLAYYLGR-ASTTSSFG 238
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ L+++Y + GAE + K
Sbjct: 239 ASGSVVLILLWVYYASCIVLFGAEFTKEYALARGEK 274
>gi|319780803|ref|YP_004140279.1| ribonuclease BN [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166691|gb|ADV10229.1| ribonuclease BN [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 333
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 50/287 (17%), Positives = 109/287 (37%), Gaps = 10/287 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR F + ++ +++ F++++ + + ++ A S+ P ++ +AG + H
Sbjct: 1 MRPSFADSWHLVRESVVGFIDDNALSHGAAMAFYAATSLAPILLIVVAIAGLVFGHDAAQ 60
Query: 61 TVIDV-VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNR 118
+ + G A + + I L +++GV ++ SLN
Sbjct: 61 LALSAQISGLMGPESADLLKTALESASGRLYGTWAAIIGLVTLLVAASGVFGEMQQSLNT 120
Query: 119 AYRVVEMRS----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+++ + R S G V L++ AI A++ P +L
Sbjct: 121 IWKIEPQGNSLSRLVRARAASLGLVAALGFLLLVSLIASAAISALGAFINAHLPFGTIIL 180
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I +A + +F ++ LP + + G + T + +G L YI T
Sbjct: 181 SGINGVVSFALIAVMFAA---IYKVLPDRTLEWRDVAIGAVGTAALFTLGKSLIGWYIGT 237
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S ++ Y ++ L+++Y F+LGAE + + + +
Sbjct: 238 -SAIASSYGAAGGLLVILLWVYYSSEIFLLGAEFTRAYSVRHGSRSD 283
>gi|134282352|ref|ZP_01769057.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 305]
gi|134246390|gb|EBA46479.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 305]
Length = 437
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 103/275 (37%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A ++ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 182 AAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++LY+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|53719578|ref|YP_108564.1| putative tRNA processing exoribonuclease [Burkholderia pseudomallei
K96243]
gi|52209992|emb|CAH35965.1| putative tRNA processing exoribonuclease [Burkholderia pseudomallei
K96243]
Length = 434
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 104/279 (37%), Gaps = 9/279 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + A + E+ +A ++ + +L++ P + L
Sbjct: 1 MSVDLDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQ 60
Query: 61 TVID--VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P I + Q A AKGL T + + + + + + N
Sbjct: 61 NSLQGFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVFTAVMMMMTIESAFNL 119
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV + R + R++++ A +TL + F + + + A ++
Sbjct: 120 IWRVRKPRPF-AQRVLAYW----ALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVF 174
Query: 179 NGRIYATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ A L L + ++++LP + G + +++ + F +Y+ T
Sbjct: 175 EWLLAAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPT 234
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y+ +Y A++ L++LY+ + GA + +++
Sbjct: 235 YTAVYGAFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 273
>gi|53725418|ref|YP_102669.1| ribonuclease BN [Burkholderia mallei ATCC 23344]
gi|67642692|ref|ZP_00441445.1| ribonuclease BN [Burkholderia mallei GB8 horse 4]
gi|76810568|ref|YP_333263.1| ribonuclease BN [Burkholderia pseudomallei 1710b]
gi|121598821|ref|YP_992806.1| ribonuclease BN [Burkholderia mallei SAVP1]
gi|126440631|ref|YP_001058726.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 668]
gi|167002924|ref|ZP_02268714.1| tRNA-processing ribonuclease BN [Burkholderia mallei PRL-20]
gi|167738880|ref|ZP_02411654.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 14]
gi|167816103|ref|ZP_02447783.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 91]
gi|167894585|ref|ZP_02481987.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 7894]
gi|167902987|ref|ZP_02490192.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei NCTC
13177]
gi|167919248|ref|ZP_02506339.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei BCC215]
gi|217423574|ref|ZP_03455075.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 576]
gi|254178581|ref|ZP_04885236.1| tRNA-processing ribonuclease BN [Burkholderia mallei ATCC 10399]
gi|254180025|ref|ZP_04886624.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1655]
gi|254199606|ref|ZP_04905972.1| tRNA-processing ribonuclease BN [Burkholderia mallei FMH]
gi|254205924|ref|ZP_04912276.1| tRNA-processing ribonuclease BN [Burkholderia mallei JHU]
gi|254258987|ref|ZP_04950041.1| ribonuclease BN [Burkholderia pseudomallei 1710a]
gi|52428841|gb|AAU49434.1| ribonuclease BN [Burkholderia mallei ATCC 23344]
gi|76580021|gb|ABA49496.1| ribonuclease BN [Burkholderia pseudomallei 1710b]
gi|121227631|gb|ABM50149.1| ribonuclease BN [Burkholderia mallei SAVP1]
gi|126220124|gb|ABN83630.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 668]
gi|147749202|gb|EDK56276.1| tRNA-processing ribonuclease BN [Burkholderia mallei FMH]
gi|147753367|gb|EDK60432.1| tRNA-processing ribonuclease BN [Burkholderia mallei JHU]
gi|160699620|gb|EDP89590.1| tRNA-processing ribonuclease BN [Burkholderia mallei ATCC 10399]
gi|184210565|gb|EDU07608.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1655]
gi|217393432|gb|EEC33453.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 576]
gi|238523880|gb|EEP87316.1| ribonuclease BN [Burkholderia mallei GB8 horse 4]
gi|243061470|gb|EES43656.1| tRNA-processing ribonuclease BN [Burkholderia mallei PRL-20]
gi|254217676|gb|EET07060.1| ribonuclease BN [Burkholderia pseudomallei 1710a]
Length = 437
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 103/275 (37%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A ++ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 182 AAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++LY+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|254252578|ref|ZP_04945896.1| hypothetical protein BDAG_01812 [Burkholderia dolosa AUO158]
gi|124895187|gb|EAY69067.1| hypothetical protein BDAG_01812 [Burkholderia dolosa AUO158]
Length = 490
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 101/274 (36%), Gaps = 7/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A E+ +A ++ + +L++ P + L +
Sbjct: 55 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 114
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + S + + + N +RV
Sbjct: 115 GFLADHLMPAQFNTQIFKYLNQ-FAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRV 173
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R R++++ ++ ++ V ++I L F I+
Sbjct: 174 RKPRP-LAQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAAQSTSIVEWLLT 229
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A++ + ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 230 LASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVY 289
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 290 GAFAALPVFLLWVYLSWFIALLGAMVASALPAIR 323
>gi|121997501|ref|YP_001002288.1| putative ribonuclease BN [Halorhodospira halophila SL1]
gi|288559243|sp|A1WUX4|Y704_HALHL RecName: Full=UPF0761 membrane protein Hhal_0704
gi|121588906|gb|ABM61486.1| tRNA-processing RNAse BN [Halorhodospira halophila SL1]
Length = 451
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 44/265 (16%), Positives = 95/265 (35%), Gaps = 8/265 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEV 73
I+ ++ A ++ LL++ P + G ++ + + + +
Sbjct: 45 LIQRIQQDQCAKSAGMLAYVTLLAIVPLMTIGFSVLAAFPVFEGVTDRLREAMVDYLVPA 104
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + + + A L + + + + LN +RV R R
Sbjct: 105 ASDAIDEHLENFMG-RAAELTAVGIAGLTVTALLLLNTIERVLNEIWRVERPRPTL-QRF 162
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL ++ V VA + V L +I A + I
Sbjct: 163 MVYWTVLTMG---PLLLGVSVASTSYMGTVN--LGPLEPPSDLIAQLLNLAPFVVQAIVF 217
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P ++ + G + + + F +I TY +Y LA++ LV
Sbjct: 218 SLIYSLVPHRSVPVLHAVIGGVVASGLFELAKGGFAAFIARAPTYEVVYGALAALPIFLV 277
Query: 254 FLYMLGVFFILGAELNASMIIYYWR 278
+LY+ + ++GAE+ ++ Y WR
Sbjct: 278 WLYISWLVILIGAEVTQALRGYRWR 302
>gi|237811990|ref|YP_002896441.1| ribonuclease BN [Burkholderia pseudomallei MSHR346]
gi|254188565|ref|ZP_04895076.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei Pasteur
52237]
gi|157936244|gb|EDO91914.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei Pasteur
52237]
gi|237504360|gb|ACQ96678.1| ribonuclease BN [Burkholderia pseudomallei MSHR346]
Length = 437
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 103/275 (37%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A ++ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 182 AAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++LY+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|169630108|ref|YP_001703757.1| ribonuclease BN [Mycobacterium abscessus ATCC 19977]
gi|169242075|emb|CAM63103.1| Possible ribonuclease BN [Mycobacterium abscessus]
Length = 320
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 102/274 (37%), Gaps = 13/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-------IVFGANLAGFLGAHQFVP 60
V ++ ++ +A ++ + +LS+ P + F L G +
Sbjct: 14 VLHVMRRTAVKSWDDSIFAQSAQAAFWQVLSLPPLLLGILGSLTFVGPLFGPDTLPEIQE 73
Query: 61 TVIDVVFGAWPEVIA-KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ V + + + + I I+ ++ + +I + + + S+ + + S+ A
Sbjct: 74 RLVRVANSVFSKSVVTEIIEPTIIDIMRDGRGEVVSIGFVISLWAGSSAISSFVDSVVEA 133
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + G + A V+ + P +A V + ++
Sbjct: 134 HDQTPLRHPVRQRFFALGLYVAALAMAVVTLPMVALGPKRIAEV-----VPDSWNSLLRY 188
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G +AL + ++ + G + + + ++ Y+ +
Sbjct: 189 GYFPLLGIALVALVTLLYRVSLPRPLPSHRLWIGALLAVTFFAIASLGLRFYLNWITGTG 248
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y LA+ + L+F +MLG +LGAELNA++
Sbjct: 249 YTYGALATPIAFLLFAFMLGFAIVLGAELNAAIE 282
>gi|271967948|ref|YP_003342144.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270511123|gb|ACZ89401.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length = 324
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 108/276 (39%), Gaps = 16/276 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ + V +A + ALLS+ PF++ + G L F P + V
Sbjct: 41 WALVTATVNAGVTYRVTGLAGEAAFFALLSLPPFMLGLIGVLGQLTRV-FGPETLQNVRD 99
Query: 69 AWPEVIAKPITDEILQVLAVP----------AKGLFTISALAAAYFSSNGVEALRISLNR 118
TD + + P L ++ L A + S + ++
Sbjct: 100 WIDAQAHLLFTDNAVDSVVTPLVEDVLKPENQVSLISLGFLLALWSGSRALFVYVDLISV 159
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY + E R TRL+SFG+ L + +++ V V P AL + ++
Sbjct: 160 AYGLGEERGIIRTRLMSFGFYLAGLLVGLLVMPVLVLGPAALR-----GALPPDYAPLVD 214
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
++ L ++ +++ LPG + +I W+ A + + + +
Sbjct: 215 ILYWPVVIIGSVFFLTLLYHVSVPVRTRWWRELPGAVLAFIIWIACAAVLRAVLAAWFSP 274
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++Y LA+ + L++LY+ + ++GA LNA +
Sbjct: 275 VSIYGSLAAPIAVLLWLYITALAVLIGATLNAEVDR 310
>gi|127514473|ref|YP_001095670.1| ribonuclease BN [Shewanella loihica PV-4]
gi|126639768|gb|ABO25411.1| tRNA-processing RNAse BN [Shewanella loihica PV-4]
Length = 285
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 108/264 (40%), Gaps = 8/264 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIA 75
+ E+ A H++ LLS+ P + ++ + + + I+ ++ +
Sbjct: 6 QRITEDQINMRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIRSHIETFIYENFIPSAG 65
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I + +A +KG + A + + + SLN +R E R ++ +
Sbjct: 66 DSVQMYINEFVANASKG-TAVGIGALVVVAILLISNIDKSLNGIWRTTEKRPMVVSFSM- 123
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
Y ++ ++ V+M VA ++ + +L ++ M +
Sbjct: 124 --YWMVLTLGPVLMGASLVATSYVVSL---KLFSGTDLSGVVPLLVERLPMFFSVATFLL 178
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+++ +P K K L G I + + +G F Y+ F Y +Y LA+I +++
Sbjct: 179 IYMVVPNTKVKFFHALLGAIVAALLFELGKKGFALYLTEFPAYEAIYGALATIPILFMWV 238
Query: 256 YMLGVFFILGAELNASMIIYYWRK 279
Y+ + ++GAE+ A+M Y ++
Sbjct: 239 YLSWIIVLIGAEITAAMPEYLDKR 262
>gi|218437304|ref|YP_002375633.1| ribonuclease BN [Cyanothece sp. PCC 7424]
gi|218170032|gb|ACK68765.1| ribonuclease BN [Cyanothece sp. PCC 7424]
Length = 291
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 48/283 (16%), Positives = 109/283 (38%), Gaps = 11/283 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
++ ++ + + + +++ +A+ ++ ++S+ P ++ +AG G +
Sbjct: 2 RIKVIIRLLKETFKEWQDDNASRLAASLAYYTIISLAPLLILVIAIAGAVFGEEAARGQI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
+ + G A+ I I + ++ ++ F ++GV A L+ +LN +
Sbjct: 62 VYQIQGLVGIDGARVIETAIENSNKPEIRNFASLISIGVLLFGASGVFAELQDALNTIWE 121
Query: 122 VVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V + R++SF +L L++ + + +Y P L + I
Sbjct: 122 VKVKPGQGVGTFIRKRILSFSAILGIGFLLLVSLVISAILSAFNSYFSHLIPGLEFIWQI 181
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + F+ FLP AK + G I T + + +G Y+
Sbjct: 182 VN---FVVSFGVITLLFGFMFKFLPDAKIAWRDVWMGAIITALLFSIGKYALGAYLGG-G 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + Y S++ LV++Y GAE Y K
Sbjct: 238 SFGSTYGAAGSLVVILVWVYYSAQILFFGAEFTQVYAKRYGSK 280
>gi|325844530|ref|ZP_08168226.1| YihY family protein [Turicibacter sp. HGF1]
gi|325489063|gb|EGC91448.1| YihY family protein [Turicibacter sp. HGF1]
Length = 309
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + E + + + I+ + ++++ P +V L +L + +++ +
Sbjct: 7 LEFLKKLSEQLKKREIKGLPEQIAFNLVMAIVPLLVVIVQLGTYLSLN---TDLVEYLIM 63
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A+ K + + + P+ +F + + ++ + S G + + N Y+V M+
Sbjct: 64 AYAPNELKLLLMNLFSTTSTPSGNIFFLITTGISFMWLISKGFYGIAAAANTTYQVPYMK 123
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNGRIYA 184
Y+ R+ SF V+ ++L +++ + + + K +LLLI +
Sbjct: 124 FAYLERIFSFLIVIFMILSLALVTVFALFGQGLIILIFKLLNIHIQSHLLLIFNIIKSLI 183
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L F + + P+ K ++ I+PG + T I W V ++ FT Y + Y+ Y
Sbjct: 184 SFLGYFSFFLSLFYLAPSIKMRVGEIIPGALVTSIGWSVSSIGFTFYANHIANYNKFYGS 243
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
L+ I+ L +L++LG ++G ++N
Sbjct: 244 LSVIIMLLFWLFILGYTIMIGLQVN 268
>gi|227832106|ref|YP_002833813.1| hypothetical protein cauri_0276 [Corynebacterium aurimucosum ATCC
700975]
gi|262184041|ref|ZP_06043462.1| hypothetical protein CaurA7_08618 [Corynebacterium aurimucosum ATCC
700975]
gi|227453122|gb|ACP31875.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975]
Length = 388
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 50/281 (17%), Positives = 111/281 (39%), Gaps = 18/281 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---QFVPTVIDVVF 67
+I F + A+ ++ L++ P ++ ++A + + + + +
Sbjct: 44 VIRRTWNDFFHDAFMDRAAGMTYFTLMAFAPTVLAAYSIATLIFSSRQAEVEQLTSEFIE 103
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +++ + ++ A+G IS + + +S V A + N Y VE
Sbjct: 104 QYVPGSLSEQAHTVVGTIIGSSAQGTLALVISLAISLFSASAYVRAFSRTANTVYGRVEG 163
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVA---------IPLALAY-VRKFFPALGNLLL 175
R T + +G + V VI+ F + IPLA + L + L
Sbjct: 164 RGIIRTWALMWGLTAVIVVGAVIVLFANLLRDAVLNEGLIPLARNVGLEDVATYLVRIFL 223
Query: 176 IIWNG-RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
+WN R T++ + + ++ F P + + I G + + V L Y+
Sbjct: 224 PVWNWLRFPVTVVVVLTLIAVLYHFSPNVRPGRFRWITYGSVVALVGTVASWGLVGLYLK 283
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
F+ ++ Y L+++M V +++ I+G +++A ++
Sbjct: 284 YFAA-ASAYGALSTVMAVFVATWLMNTVLIVGLKIDAEVLR 323
>gi|227540637|ref|ZP_03970686.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
gi|227239499|gb|EEI89514.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
Length = 336
Score = 115 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 58/280 (20%), Positives = 109/280 (38%), Gaps = 15/280 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV------PTVID 64
++ + I F+++ M++ ++ + S+ P I+ GF Q V
Sbjct: 16 LMMNVINGFLDDKCMKMSASLAYYTVFSIGPLIIIIIWCIGFFYGTQLDGPTGARDEVFK 75
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + +A + I ++ + + + S+ ++ S+N ++V
Sbjct: 76 EFSELFGKDVAVQVQSTIQKISFENRSNIGIIVGIVTLIITSTTIFVDIQDSINTIWKVK 135
Query: 124 EM--RSW---YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ W I RLISF VL L+ + I Y ++F + +L
Sbjct: 136 AKAKKGWLKLIINRLISFSMVLGLGFLLIASLMINGIIVALTNYFGQYFENISLPMLDWI 195
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
N T + + F+ FLP AK + IL G IFT + ++ G + YI +T
Sbjct: 196 NT--GITFMVITALFGFIFSFLPDAKVRFRDILGGAIFTALLFMFGRYAISLYITQSAT- 252
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ Y SI+ L ++Y GAE + I Y +
Sbjct: 253 ASAYGAAGSIIVLLGWVYYSSAILYFGAEFTKEIAIRYGK 292
>gi|332995314|gb|AEF05369.1| hypothetical protein ambt_19390 [Alteromonas sp. SN2]
Length = 294
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 109/272 (40%), Gaps = 8/272 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFG 68
D+ I+ E++ A H++ LLS+ PFI+ + A V ++ +F
Sbjct: 19 DLFTIFIKRCREDNITISAGHLAYVTLLSLVPFIMVTFTIMSAFPAFASVRGKLEYFIFN 78
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + + + ++ + I L+ + + + +LNR +R R
Sbjct: 79 NFVPTASDTVHEYMSDFVGNASE-MGAIGILSLLVVALMLISNVDKTLNRIWRTQSDRPI 137
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
T I + + L + + + + A+ ++ P LG LL + A
Sbjct: 138 VYTFAIYWMVITLGPLLIGSSVIISSYLAGLAAFAEEYTPGLGTFLLTL------VPSFA 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ +++ +P + + G I +++ + F YI F +Y +Y LA +
Sbjct: 192 AMLAFFILYMIVPNRRVFARHAISGAILATVAFELTKSGFALYITNFPSYELIYGALAVV 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y+ + +LGAE S+ + +K
Sbjct: 252 PILFLWVYISWILVLLGAEFTCSLGQAFENRK 283
>gi|124266615|ref|YP_001020619.1| putative ribonuclease BN transmembrane protein [Methylibium
petroleiphilum PM1]
gi|288559203|sp|A2SFP5|Y1422_METPP RecName: Full=UPF0761 membrane protein Mpe_A1422
gi|124259390|gb|ABM94384.1| putative ribonuclease BN transmembrane protein [Methylibium
petroleiphilum PM1]
Length = 416
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 103/267 (38%), Gaps = 9/267 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID- 64
D + + F E+ AS ++ + +++ P + ++
Sbjct: 32 WPWLDTLKTLRQRFREDRLGLTASSLTFTTTIALVPLATVTLAIFSAFPMFGQFQGALEK 91
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P+ IAKP+ + Q A A L T+ + + + + +LN +RV
Sbjct: 92 YFIQSLVPDGIAKPVLGALTQ-FAGKAHRLGTVGLVVLVLTALALMLTIDRTLNAIWRVR 150
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ Y A++ +++ A++ R A+ L ++ N +
Sbjct: 151 KPRPIAQRVLV---YWAAATLGPLLLGVSLTLTSYAISASRGVVGAMPGSLSVLLNALEF 207
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L + + ++P + + L G +F + + Y+ TYST+Y
Sbjct: 208 G---LLAAAMAGLFHYVPNTEVRWRHALAGGLFVSAGFELAKKGLAWYLAQVPTYSTIYG 264
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA 270
A++ L++LY+ V +LGA + A
Sbjct: 265 AFATVPIFLIWLYLGWVIVLLGAVIAA 291
>gi|293374361|ref|ZP_06620688.1| YihY family protein [Turicibacter sanguinis PC909]
gi|292647024|gb|EFF65007.1| YihY family protein [Turicibacter sanguinis PC909]
Length = 309
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 118/265 (44%), Gaps = 7/265 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + E + + + I+ + ++++ P +V L +L + +++ +
Sbjct: 7 LEFLKKLSEQLKKREIKGLPEQIAFNLVMAIVPLLVVIVQLGTYLSLN---TDLVEYLIM 63
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A+ K + + + P+ +F + + ++ + S G + + N Y+V M+
Sbjct: 64 AYAPNELKLLLMNLFSTTSTPSGNIFFLITTGISFMWLISKGFYGIAAAANTTYQVPYMK 123
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNGRIYA 184
Y+ R+ SF V+ ++L +++ + + + K +LLLI +
Sbjct: 124 FAYLERIFSFLIVIFMILSLALVTVFALFGQGLIILIFKILNIHIQSHLLLIFNIIKSLI 183
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L F + + P+ K ++ I+PG + T I W V ++ FT Y + Y+ Y
Sbjct: 184 SFLGYFSFFLSLFYLAPSIKMRVGEIIPGALVTSIGWSVSSIGFTFYANHIANYNKFYGS 243
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
L+ I+ L +L++LG ++G ++N
Sbjct: 244 LSVIIMLLFWLFILGYTIMIGLQVN 268
>gi|187924749|ref|YP_001896391.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
gi|187715943|gb|ACD17167.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
Length = 437
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 103/277 (37%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A + E+ +A ++ + +LS+ P L
Sbjct: 6 RFDLDTLKRLAQFAAQRSSEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFASFQM 65
Query: 62 VIDVVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + P + I + + Q A AKGL TI + + + + + N
Sbjct: 66 SLQIFLADHLMPAQLNSQIFNYLNQ-FASKAKGLTTIGMIFLFVTAVMTMMTVESAFNVI 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R R++ + ++ L+ +S + + + ++
Sbjct: 125 WRVRKARP-IAQRILVYWAIITLGPILIGVSLSISSYLFTQSMTFTAAQRMTPVIEWALT 183
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A + + ++++LP + + + G + I++ + F +Y+ TY+
Sbjct: 184 G---AALPLTAVAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRIPTYT 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y A++ LV++Y+ + GA + +++
Sbjct: 241 AVYGAFAAVPLFLVWMYLCWFITLAGAMIASALPAIR 277
>gi|189352680|ref|YP_001948307.1| BN-like family ribonuclease [Burkholderia multivorans ATCC 17616]
gi|189336702|dbj|BAG45771.1| BN-like family ribonuclease [Burkholderia multivorans ATCC 17616]
Length = 325
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 105/265 (39%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + +MA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR----- 126
A I + A G+ T+ + AA +S +L +LN + E R
Sbjct: 83 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVL 142
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RL+SFG VL + L++ + A+ ++ + +++ ++ +
Sbjct: 143 GLVRVRLVSFGLVLGVAFLLIVSLVL----DTAITFIGTWLLGDSPYVVVTNVLQLVVGV 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + FLP A+ G I + I + G LF Y+ T ++ +
Sbjct: 199 AVLAGAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLFALYLARAGT-ASAFGAAG 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY + +LGAE +A+
Sbjct: 258 SFAVLLMWLYFSALVLLLGAEFSAA 282
>gi|300771405|ref|ZP_07081281.1| probable ribonuclease BN [Sphingobacterium spiritivorum ATCC 33861]
gi|300762075|gb|EFK58895.1| probable ribonuclease BN [Sphingobacterium spiritivorum ATCC 33861]
Length = 336
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 61/280 (21%), Positives = 111/280 (39%), Gaps = 15/280 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV------PTVID 64
++ + I F+++ M++ ++ + S+ P I+ GF Q V
Sbjct: 16 LMMNVINGFLDDKCMKMSASLAYYTVFSIGPLIIIIIWCIGFFYGTQLDGPTGARDEVFK 75
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + +A + I ++ + + + S+ ++ S+N ++V
Sbjct: 76 EFSELFGKDVAVQVQSTIQKISFENRSNIGIIVGIVTLIITSTTIFVDIQDSINTIWKVK 135
Query: 124 EM--RSW---YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ W I RLISF VL L+ + I Y ++F + +L
Sbjct: 136 AKAKKGWLKLIINRLISFSMVLGLGFLLIASLMINGIIVALTNYFGQYFENISLPMLDWI 195
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
N I T++ G IF FLP AK + IL G IFT + ++ G + YI +T
Sbjct: 196 NTGITFTVITALFGFIFS--FLPDAKVRFRDILGGAIFTALLFMFGRYAISLYITQSAT- 252
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ Y SI+ L ++Y GAE + I Y +
Sbjct: 253 ASAYGAAGSIIVLLGWVYYSSAILYFGAEFTKEIAIRYGK 292
>gi|322421254|ref|YP_004200477.1| ribonuclease BN [Geobacter sp. M18]
gi|320127641|gb|ADW15201.1| ribonuclease BN [Geobacter sp. M18]
Length = 447
Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 110/258 (42%), Gaps = 5/258 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
A +F+ +G A+ +S + LLS+ P + ++ LGA ++ +V
Sbjct: 39 HAFSNFMANNGLLRATALSFTTLLSLVPLLALAFSVLKGLGAQN---RLVPLVLKQVTAG 95
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I + + I +A + + + + ++ + +R + V E RS+Y R
Sbjct: 96 NEEVVNRVISYIDNTNMGSVGAIGLVALLFTAISMLGSIEEAFDRIWGVPETRSFY--RK 153
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
S +L S L++++ + L ++ + L + L ++I L
Sbjct: 154 FSDYLSVLVSAPLLLLAATSITTTLQSKWLIGWILERTYLGDLFLFTLGLTPYLVVWIAL 213
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++F+P + + S L G + W + H+ V Y+ +Y LA++ ++
Sbjct: 214 FLLYVFIPNIRVRFDSALIGAVLAGTLWESAQWAYIHFQVGAGNYNAIYGTLAALPVLMI 273
Query: 254 FLYMLGVFFILGAELNAS 271
++Y+ V + G E+ A+
Sbjct: 274 WIYVSWVIVLFGMEMVAA 291
>gi|72162286|ref|YP_289943.1| hypothetical protein Tfu_1887 [Thermobifida fusca YX]
gi|71916018|gb|AAZ55920.1| similar to membrane protein [Thermobifida fusca YX]
Length = 433
Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 107/272 (39%), Gaps = 14/272 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFG-------ANLAGFLGAHQFVPTVI 63
++ + + +A+ + +LLS+ ++ +++ G + ++
Sbjct: 87 LVARTVRSALRVRIIGLAAESAFFSLLSLPSLLLGLVGTLGHLSSVLGHQTVVEIRAWML 146
Query: 64 DVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
D+ E + + + L G+ +++ L + + S + ++ AY +
Sbjct: 147 DLAATVLTAEAVQTTVEPLVDDFLGGAHGGVLSLTFLVSLWSGSRAMSVFIEAITIAYGL 206
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
MR + RL++F L A + +++ VA P AL R PA L + G
Sbjct: 207 EGMRGYLRRRLLAFVAYLGALLFALVVLPAVVAGPDAL---RALLPAADTYLHL---GYW 260
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L ++ ++ ++ ++ LPG I + + G V Y+ +Y
Sbjct: 261 PLVGLLSLGSIVALYTLSVPVRTSLVRQLPGAIAAVLILLCGTVGLRLYLEASFGQVNLY 320
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
L + + +++LY+ + + G+ LNA +
Sbjct: 321 GPLTAPIIIVIWLYLTALAVLAGSSLNAEIDA 352
>gi|300933848|ref|ZP_07149104.1| hypothetical protein CresD4_07235 [Corynebacterium resistens DSM
45100]
Length = 378
Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 50/285 (17%), Positives = 100/285 (35%), Gaps = 18/285 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVV 66
I+ + + +S LL+ P ++ + + + + +
Sbjct: 54 HILKRLYIEYFFRGLMDRGAILSFFTLLTTVPTMMAFYAITTLILDKNRTRVTELTDEFI 113
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVE 124
P A + Q++ K + T IS + A + SS V A S N Y E
Sbjct: 114 TENIPGRFADEARQIVEQIIGSTDKSMLTLIISVIFALFSSSAYVRAFSRSANALYGRQE 173
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF----------PALGNLL 174
RS T L +G + LV+++ F L V + N
Sbjct: 174 GRSLARTWLTMWGLTIALVFGLVLIAVAFFLRGDLLQPVLNAVAEPLNWEGGADFVLNKF 233
Query: 175 LIIWNGRIYATMLALFIGLIF-VHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYI 232
L +W + + L I LI ++ F P + ++ + G +F ++ + + Y+
Sbjct: 234 LPVWGYLRWPIVFGLSIMLIATLYHFAPNVRYGRMRWLTTGSVFALVTMSLVGLGVRIYL 293
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F + Y L ++ + L + ++G +L+A + +
Sbjct: 294 NRFLEFG-TYGALGGLIALFMGLVIANTLLLMGLKLDAEVTRFRE 337
>gi|291613211|ref|YP_003523368.1| ribonuclease BN [Sideroxydans lithotrophicus ES-1]
gi|291583323|gb|ADE10981.1| ribonuclease BN [Sideroxydans lithotrophicus ES-1]
Length = 415
Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 93/265 (35%), Gaps = 7/265 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVF 67
F + E+ MA+ ++ + LLSV P I L + ++ + + +
Sbjct: 22 FRFLRYVTVRLQEDRCTQMAASLTFTTLLSVVPLITIALILFSAFPSFSEYSTPIKEFIL 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
I +Q A L + A + + + + N +RV RS
Sbjct: 82 KNMVPETGGRIITSYMQQFTESASRLTAAGLVFLAVTAMLLMLTIDNAFNMIWRVSRPRS 141
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ R++ + VL + LV S + + + + I + ++
Sbjct: 142 -LLQRVLVYWAVLTLAPLLVGGSLSLTSWLVGFS-----AEYARQVPSIGMDVLKLLPVV 195
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ +P + L G + +++ F YI F+ Y +Y AS
Sbjct: 196 MTTAAFTLLFRVVPNRYVPMPHALIGGLIAAVAFESMNRAFAFYISHFANYKLVYGAFAS 255
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
+ L+++Y + + GA + AS+
Sbjct: 256 VPIFLMWVYFSWITVLFGAIITASL 280
>gi|209522505|ref|ZP_03271096.1| ribonuclease BN [Burkholderia sp. H160]
gi|209497059|gb|EDZ97323.1| ribonuclease BN [Burkholderia sp. H160]
Length = 437
Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 100/277 (36%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A + E+ +A ++ + +L++ P L
Sbjct: 6 RFDLDTLKRLAQFAAQRIGEDRIPQVAGSLTFTTMLALVPLATVAFALFTAFPIFSSFQA 65
Query: 62 VIDVVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ P + I + Q A AKGL TI + + + + + N
Sbjct: 66 SLQFFLADHLMPARLNDQIFKYLNQ-FASKAKGLTTIGMIVLFLTAVMTMMTVESAFNVI 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R R++ + ++ L+ +S + + + L+
Sbjct: 125 WRVRKARP-VAQRILVYWAIITLGPILIGVSLSISSYLFTQSMSYSAAQRITPLIAW--- 180
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
AT+ + ++++LP + + G + +++ + F +Y+ TY+
Sbjct: 181 ALASATLPLTVLAFTILYVYLPNCRVAWRDAVVGGVIAAVAFELSKRGFGYYVRQIPTYT 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y A++ L+++Y+ + GA + +++
Sbjct: 241 AVYGAFAAVPLFLLWMYLCWFITLTGAMIASALPAIR 277
>gi|212697027|ref|ZP_03305155.1| hypothetical protein ANHYDRO_01592 [Anaerococcus hydrogenalis DSM
7454]
gi|212675802|gb|EEB35409.1| hypothetical protein ANHYDRO_01592 [Anaerococcus hydrogenalis DSM
7454]
Length = 291
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 110/284 (38%), Gaps = 12/284 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + I + IE D +AS +S L + P ++ NL
Sbjct: 1 MKIKSSNIKKFILNLIERIRNHDLMTLASSLSYYFLSAAIPMLLVLLNLVTKYMKGN--E 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRA 119
V+ P+ I I + ++ + + I+ + A + +S GV + +++N A
Sbjct: 59 DVVIEFIKLLPDSIRGVILLIVKSIIDSGSASTISTITLIFALWSASKGVSKIILAINVA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA------LGNL 173
Y + + S ++ F Y + L+ M + + L + L
Sbjct: 119 YGLEDDHSMIKNKIFGFLYTFILIFILIFMFLLKIYSNGILRIIEDVLKIVNSSFSLDEF 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLP---AAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+I + L +GL ++ P + K K G I T + + + +++
Sbjct: 179 TWLINLISGIIPPIILILGLTLLYKAAPYNNSIKIKFKDAFVGSISTSLMIFITSFGYSY 238
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++ S S +Y LA I+ LV++ + + ILGAE+ A+ +
Sbjct: 239 FLKNMSNMSVIYGALAGIIALLVWMLLFSLTIILGAEIIAAYMK 282
>gi|237748473|ref|ZP_04578953.1| ribonuclease BN transmembrane protein [Oxalobacter formigenes
OXCC13]
gi|229379835|gb|EEO29926.1| ribonuclease BN transmembrane protein [Oxalobacter formigenes
OXCC13]
Length = 439
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/262 (18%), Positives = 97/262 (37%), Gaps = 9/262 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF--GAWPEVI 74
+ E + +A +IS + LLS+ P + + + ++ F G P
Sbjct: 35 KRLAENNLTDVAGNISFTILLSIVPMLAIVLAIFTTFPEFGSLQNTLETYFSQGMIPAST 94
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A I + A A + I L + + + + N + V+ R ++
Sbjct: 95 AHIILSNLTTFAAN-AANVSIIGGLTLVATALMTISLIESTFNHIWHVITPRPIVKRIMM 153
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
G + + L I ++ + LA + P L ++ + + A I
Sbjct: 154 YIGIAIFGPLLLGISIYLTSHLVLAAHGLVANLPFLNSVSSSLISIFWTA------IAFT 207
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P G IF I++ + F +IV FSTY +Y LA+ +++
Sbjct: 208 LLYRVVPNRLVLWKDAASGGIFAGIAFEIAIRAFAFFIVNFSTYERIYGALAAFPIFMMW 267
Query: 255 LYMLGVFFILGAELNASMIIYY 276
+Y+ + +LG + A +
Sbjct: 268 IYISCLIMLLGGMVAALLPEIR 289
>gi|296393380|ref|YP_003658264.1| ribonuclease BN [Segniliparus rotundus DSM 44985]
gi|296180527|gb|ADG97433.1| ribonuclease BN [Segniliparus rotundus DSM 44985]
Length = 344
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 107/281 (38%), Gaps = 11/281 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-------GAHQFVPTV 62
++ + E +A ++ + +LS+ P + G++ +
Sbjct: 9 RVLGRTLSMSWEHSIFAESAGAAFWQILSLTPMFLGLLGTLGYVCPWFGPGVLEDVQHKI 68
Query: 63 IDVVFGAWPEVIA-KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ A + + + I +L V A + + + S L + + S+ + A S+ RA+
Sbjct: 69 LSFAQQALSQKLVNEVIRPTLLAVTANGREAVTSFSFLLSLWAGSSAISAFVDSIVRAHD 128
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E+R R+ + ++ ++ + + P + L+ ++N
Sbjct: 129 QTELRHPVRQRIYALILYIVFLLSAMFALPILSVAP--HQVTMRLPIETHPLVSSVYNNL 186
Query: 182 I-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+A+ + L + + ++PG + + ++ G Y+ ++
Sbjct: 187 YGPGLFVAVALFLAWFYHIALPVPPPWHRLIPGALLAVMFFLAGRSGLLWYLNWVTSTGY 246
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y LA+ + L+ + LG+ I GAELN+++ ++ +
Sbjct: 247 TYGALATPIALLLVAFFLGMAVIAGAELNSTVEHFWPTRSK 287
>gi|307151617|ref|YP_003887001.1| ribonuclease BN [Cyanothece sp. PCC 7822]
gi|306981845|gb|ADN13726.1| ribonuclease BN [Cyanothece sp. PCC 7822]
Length = 293
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/283 (16%), Positives = 111/283 (39%), Gaps = 11/283 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
++ ++ + + + +++ +A+ ++ ++S+ P ++ +AG G +
Sbjct: 2 KLRVIIKLLKETFQEWQDDNASRLAASLAYYTIISLAPLLILVIAIAGAVFGEEAARGEI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
+ + G AK I I + + ++ ++ F ++GV A L+ +LN +
Sbjct: 62 VYQIKGLVGLEGAKVIETAIENSSKPELRNMASLISIGVLIFGASGVFAELQDALNFIWE 121
Query: 122 VVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ S+ R++SF +L L++ + + Y FP L + +
Sbjct: 122 IKAKPGQGLVSFIRKRILSFSAILGIGFLLLVSLVISAILAALNTYFNYLFPGLNFVWQL 181
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + F+ +LP AK + G I T + + +G Y+
Sbjct: 182 VN---FVVSFAVITLLFAFMFKYLPDAKIGWRDVGMGAILTSLLFSIGKQALGLYLGG-G 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + Y S++ LV++Y GAE Y K
Sbjct: 238 SFGSTYGAAGSLVVILVWVYYSAQILFFGAEFTQVYARKYGSK 280
>gi|262370530|ref|ZP_06063855.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262314330|gb|EEY95372.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 416
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 103/282 (36%), Gaps = 8/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYEKTWFQFVLFVLRRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D+ L + L I L + + ++ NR
Sbjct: 69 QQLQQLIYSNFLPKTTIAF--DKALNAFTDKSSNLTIIGILFLFVTTVMMLTSIEKVFNR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E R I + + ++ L+ +FV + +L + F +
Sbjct: 127 IWRVRETRGGIIG-FMRYWTIISLGPILLGSAFVISSTMASLNVLSNNFAGYELNGAFV- 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ +G ++ +P I S L +F+ + + + LF + F++Y
Sbjct: 185 --LWLISFCLTVLGFFILNWTIPNRSVPIKSALIAGLFSAVVFELLKNLFGFIMSNFTSY 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A+I L+++++ ++G E++ ++ + K+
Sbjct: 243 EVVYGAFAAIPIFLLWIFLSWNIVLIGVEISYALTAFTSHKE 284
>gi|90414677|ref|ZP_01222648.1| ribonuclease BN [Photobacterium profundum 3TCK]
gi|90324219|gb|EAS40794.1| ribonuclease BN [Photobacterium profundum 3TCK]
Length = 321
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 98/270 (36%), Gaps = 10/270 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI- 63
F + + A ++ LLS+ P I + + ++
Sbjct: 18 LKQTFAYLTYLNRRVKHDRLTIAAGSMAYVTLLSLVPMITVVLSALSAFPVFAGLGELLQ 77
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRV 122
+ V + + + + + +A G T + A + + + ++ +LN +RV
Sbjct: 78 NFVIENFVPAAGEVVKTYLNEFVA--NAGKMTAVGVGALFVVAMMLMSSIDQALNYIWRV 135
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R I+ I + VL LV S + +L + + +
Sbjct: 136 HEKRRPVISFSI-YWMVLTLGPILVGSSIAVSSYLGSLNLLNS-----EAVNGLFQQTLR 189
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + ++L +P K K L G + I + + F YI F +Y +Y
Sbjct: 190 ALPVIMSSCAFLGLYLLVPNLKVKFSHALFGALVASILFELSKKGFALYISNFPSYQVIY 249
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
LA I V++Y+ +LGAE+ AS+
Sbjct: 250 GALAVIPILFVWVYLCWCIVLLGAEITASL 279
>gi|119899455|ref|YP_934668.1| exoribonuclease II [Azoarcus sp. BH72]
gi|288559235|sp|A1KAC6|Y3165_AZOSB RecName: Full=UPF0761 membrane protein azo3165
gi|119671868|emb|CAL95782.1| exoribonuclease II [Azoarcus sp. BH72]
Length = 408
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 103/279 (36%), Gaps = 9/279 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ D + E F +A ++ + LL++ P + + G L + +
Sbjct: 2 HLHPTRDFLRLLGERFSATRCPQVAGSLAFTTLLALVPLLTVAIGVFGNLPGMDKLGASL 61
Query: 64 D--VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ P+ + IT LQ + A L I A + + + N+ +
Sbjct: 62 KDFLLENLLPDRAGRIITTYALQ-FSQKAARLTLIGTAMLAVTALMLLATIERVFNQIWG 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R + +S+ + L V L + A P +G +
Sbjct: 121 VRHRRPLLMRITVSWFMLTLGPVILGGSVVATGYLVSTSAEWSDRLPWIGEIAAAT---- 176
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L L F++ +P +++ L G + + +++ +I F TY+ +
Sbjct: 177 --LPPLLLGALFSFLYYAVPNHPVRLLHALAGGLCAALVFLLMQRGLGLFIAGFPTYTLI 234
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y A++ L++LY+ +LGA + A++ + R++
Sbjct: 235 YGTFAALPIFLLWLYLSWTVILLGALITATLPAFLERQR 273
>gi|54310542|ref|YP_131562.1| ribonuclease BN [Photobacterium profundum SS9]
gi|67460675|sp|Q6LLR8|Y3489_PHOPR RecName: Full=UPF0761 membrane protein PBPRA3489
gi|46914985|emb|CAG21760.1| putative ribonuclease BN [Photobacterium profundum SS9]
Length = 319
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 94/258 (36%), Gaps = 10/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIA 75
+ A ++ LLS+ P I + ++ + V +
Sbjct: 28 RRIKHDRLTIAAGSMAYVTLLSLVPMITVVLAALSAFPVFAGLGELLQNFVIENFVPAAG 87
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEMRSWYITRLI 134
+ + + + +A G T + A + + + ++ +LN +RV E R I+ I
Sbjct: 88 EVVKTYLNEFVA--NAGKMTAVGIGALFVVAMMLMSSIDHALNYIWRVHEKRRPVISFSI 145
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ VL LV S + +L + + + ++ +
Sbjct: 146 -YWMVLTLGPILVGSSIAVSSYLGSLNLLNS-----EAVNGLFQQTLRALPVIMSSSAFL 199
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++L +P K K L G + + + F YI F +Y +Y LA I V+
Sbjct: 200 GLYLLVPNLKVKFSHALLGALVASSLFELSKKGFALYISNFPSYQVIYGALAVIPILFVW 259
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ +LGAE+ AS+
Sbjct: 260 VYLCWCIVLLGAEITASL 277
>gi|242279976|ref|YP_002992105.1| ribonuclease BN [Desulfovibrio salexigens DSM 2638]
gi|242122870|gb|ACS80566.1| ribonuclease BN [Desulfovibrio salexigens DSM 2638]
Length = 456
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 114/278 (41%), Gaps = 4/278 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + + Y F+ + AS ++ + +LS+ PF+ +L +G +
Sbjct: 31 KILHTMARVGYLVTIGFLRDQCIIRASALTFTTMLSIVPFLAVAFSLMKGMGFQD--SSY 88
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I + + + + V + L I + + V + + N ++V
Sbjct: 89 IQEMLLKVSAGREEVVGKILEYVDNTNVQTLGWIGVATLLFTVLSTVGTVEKAFNIIWKV 148
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R+++ R + + ++ + ++ V++ + V + F ++ + +
Sbjct: 149 SHGRTFW--RKFTDFFSVIFICPVAVIVATSVSVSIKKQAVLQQFGSIYGITELESFLIS 206
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A ++ +++ F++ F+P K +I S L G + W + + ++ + + Y+ +Y
Sbjct: 207 LAPLVLIWLSFTFIYAFMPNTKVRITSALAGGVVAGTVWQMAQWAYINWQIGVTKYNAIY 266
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A + LV+LY V +LG+E++ ++ ++
Sbjct: 267 GSFAQLPLFLVWLYASWVIVLLGSEISYAVQNVMLYRQ 304
>gi|149375985|ref|ZP_01893751.1| ribonuclease BN-like family protein [Marinobacter algicola DG893]
gi|149359622|gb|EDM48080.1| ribonuclease BN-like family protein [Marinobacter algicola DG893]
Length = 440
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 111/261 (42%), Gaps = 6/261 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFG 68
Y + + A + + LLS+ P + ++ LG HQ P +
Sbjct: 37 RTAYALARDVISGNLTLHAMSLVYTTLLSIVPLLALSFSVLKALGVHQRMEPFLFQFFRP 96
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + I ++IL + G+ ++ Y + V+ + S N +RV +MRS
Sbjct: 97 MGPQGVE--IAEQILGFVDNMKVGVLGSVGLALLVYTVVSLVQKIERSFNMIWRVPDMRS 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
R ++ V++ L++ + A + A+V+ +I++ R ML
Sbjct: 155 -MAQRFSNYLSVIMVGPLLMVSAIGISATIFSSAFVQALMEIEPLGSMIVFATRFTPFML 213
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ FV++F+P + K+ G + ISW +LF ++ + Y+ +Y+ A
Sbjct: 214 VV-GAFTFVYVFIPNTRVKLRYAFIGGLVAGISWQAAGMLFASFVAGSAKYAAIYSSFAI 272
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
+ L+++Y+ + +LG+ +
Sbjct: 273 GIILLIWVYLNWMILLLGSSI 293
>gi|85375451|ref|YP_459513.1| hypothetical protein ELI_13120 [Erythrobacter litoralis HTCC2594]
gi|84788534|gb|ABC64716.1| hypothetical protein ELI_13120 [Erythrobacter litoralis HTCC2594]
Length = 245
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 81/240 (33%), Gaps = 17/240 (7%)
Query: 41 PFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL---FTIS 97
P + G + V I + P A+ I ++ V+ P ++
Sbjct: 18 PLLGAIVLAYGIVADPLMVAENIRALSSFLPASAAELIGSQLEGVVEGPDSSKGFGLLLA 77
Query: 98 ALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP 157
+ + + +G AL L+ AY E R + ++ A + L I++
Sbjct: 78 LAISLFGARSGATALMAGLDIAYDTTETRGFVEKNALALLITGGAVLGLGIVALALTVAG 137
Query: 158 LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIF 216
L + + +G + ++ P + PG +
Sbjct: 138 LIGDALG-------------LAASYLVLFSSGALGAVLLYRHAPDRPTATWNRTWPGAVV 184
Query: 217 TWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
W++ LF Y+ F Y+ Y L ++M L +LY+ +LGAELN +
Sbjct: 185 FAALWLLATSLFGFYVANFGNYNATYGSLGAVMVLLTWLYLSAYLLLLGAELNVQVAARR 244
>gi|168698042|ref|ZP_02730319.1| putative ribonuclease BN [Gemmata obscuriglobus UQM 2246]
Length = 314
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 14/264 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGAW 70
+Y A ++++D +++ +++ +LS+ P +V + G V V
Sbjct: 28 LYAAARAWLDDDAMRLSAAVAMYTILSLSPLLVITIKVLALVFGEEAASGQVRRQVEQFL 87
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRV--VEMRS 127
A+ + + + + A L T +++ F+++GV A LR SLN + V R
Sbjct: 88 GPTGARAVEGMVTETVRPGAGLLATAASVGVLLFTASGVFAELRDSLNALWGVAPRPGRG 147
Query: 128 WY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
W+ R S G V L++ V A+ + +V + + + +
Sbjct: 148 WWAAVRDRFQSIGMVFAVGFLLLVSQAVTTALAVMSEFVAGGAGRVASATDL------FV 201
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L + I + LP + + L G T + VG L Y T+ + +++Y
Sbjct: 202 STLVVAILFGLIFRLLPDVELRWRDTLFGAAVTAALFKVGQYLLALYF-TYGSTASVYGA 260
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
S + L+++Y GAEL
Sbjct: 261 AGSFVVVLLWVYYSCWILFYGAEL 284
>gi|288940217|ref|YP_003442457.1| ribonuclease BN [Allochromatium vinosum DSM 180]
gi|288895589|gb|ADC61425.1| ribonuclease BN [Allochromatium vinosum DSM 180]
Length = 439
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 109/271 (40%), Gaps = 6/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ + + A + + LLS+ P + ++ G H + ++
Sbjct: 35 RLVHAVARDLTQGNLTLYAMSLVYTTLLSLVPLLAVSFSVLKGFGVHNQIEPLLANALEP 94
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
E + I V + L + Y + ++ + S N +RV E+R +
Sbjct: 95 LGESGVEITQQLIGFVDRMQVGVLGALGVGMLFYTVVSLIQKIEQSFNHVWRVDEVRPFA 154
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L ++ S V V+ L + + + ++ R+ A L +
Sbjct: 155 QR--FTQYLSVLTIGPVLFFSAVGVSASLGGNPLLRSVLDYEPVSWLMELARLVAPYLMI 212
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F++ F+P + +++S L G + + W LF H++ + Y+ +Y+ LA ++
Sbjct: 213 SATFAFIYRFVPNTQVRLVSALIGGLVAGLLWQSVGALFAHFMAGSTQYTAIYSSLAILI 272
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++++Y+ + ++G +S+ Y+ +
Sbjct: 273 LLMIWIYLGWLILLVG----SSLAFYHQHPE 299
>gi|293604640|ref|ZP_06687042.1| tRNA-processing ribonuclease BN [Achromobacter piechaudii ATCC
43553]
gi|292816971|gb|EFF76050.1| tRNA-processing ribonuclease BN [Achromobacter piechaudii ATCC
43553]
Length = 437
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 97/261 (37%), Gaps = 9/261 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF-- 67
+ ++ EE +AS ++ + +L++ P + +L Q ++
Sbjct: 30 RVFRFTLQRAGEEKLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVALEDFLTN 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ I + + Q A A L I S + + + N + V R
Sbjct: 90 SLMPPSVSDNIMEYLNQ-FARQASRLTAIGGAFLLVTSLLLIMTIDQAFNDIWHVSRQRP 148
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L+ + + L V + + R+ + ++ +I + ++
Sbjct: 149 LPQRALVYWAIITLGPVLAGASLWATSFV------ARESLGLVSDVPEVISVVVSFIPLV 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+G + + +P + L G T I+ + F +Y+ F TY+ +Y A+
Sbjct: 203 LTGLGFAALFVVVPNREVLWRDALVGGFVTAIALEIMKSGFAYYLTRFPTYTIIYGAFAT 262
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
+ L+++Y+ + +LGA L
Sbjct: 263 LPIFLLWIYLSWLAVLLGATL 283
>gi|319763673|ref|YP_004127610.1| ribonuclease bn [Alicycliphilus denitrificans BC]
gi|330824062|ref|YP_004387365.1| ribonuclease BN [Alicycliphilus denitrificans K601]
gi|317118234|gb|ADV00723.1| ribonuclease BN [Alicycliphilus denitrificans BC]
gi|329309434|gb|AEB83849.1| ribonuclease BN [Alicycliphilus denitrificans K601]
Length = 417
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 101/258 (39%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + LL++ PF + + V+ +V P+ I
Sbjct: 32 ERFREDRLGLTASSLTFTTLLALVPFFTVALAVFSAFPIFGQMQQVLQRWLVDSLVPDSI 91
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++P+ + Q + A GL + + + +LN +RV +R LI
Sbjct: 92 SRPVLGYLTQ-FSAKASGLGMAGFSVLMVTALALILTIDRTLNTIWRVRRLRPLGQRVLI 150
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + ++ A + G LL+ L L G+
Sbjct: 151 YWAAITLGPLVLAASLALTTSMASAASRGLGATLPGGTRLLL-----DSIEFLVLAAGVA 205
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F + + Y+ + TYS +Y A++ L++
Sbjct: 206 AMYRYVPNTQVHWRYAWAGGLFVSVGMELAKKGLALYLASVPTYSVLYGTFATLPILLLW 265
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 266 IYVAWVIVLLGAVVAAYL 283
>gi|329121368|ref|ZP_08249994.1| YihY family protein [Dialister micraerophilus DSM 19965]
gi|327469777|gb|EGF15243.1| YihY family protein [Dialister micraerophilus DSM 19965]
Length = 265
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 105/255 (41%), Gaps = 4/255 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
++ F+++D A A+ + +L + PF+VF N F A Q VI P+ +
Sbjct: 1 MVKRFIKDDVTAFAAESTYYFILGLVPFLVFFTNAILFFAAPQI--QVIIKFLHYLPQQL 58
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEMRSWYITRL 133
+ + I +++ + I A + SS G+ + ++++ + + +++W +
Sbjct: 59 EVSMAENIYRIIQGRSTVWLAIGLFGALWTSSQGINVIIRAMDKIFFKNRNIQNWITVSI 118
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
S + LL + +L++ + V + + +F L + + + L
Sbjct: 119 KSLLFTLLITFSLILSLGMIVFANALIYVIAYYFGIPEMFLEMWNIAKYAIPFTMMIFSL 178
Query: 194 IFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ F PA K + IL +F ++ ++ +YI+ S Y L ++
Sbjct: 179 AAFYRFAPAKKCATWPVILVTSLFVTGILLLLTGIYGYYILEISKMGATYGSLIGLVVLF 238
Query: 253 VFLYMLGVFFILGAE 267
++ + + + G+E
Sbjct: 239 IWFRLASMVILTGSE 253
>gi|325478532|gb|EGC81644.1| YihY family protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 324
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 116/297 (39%), Gaps = 20/297 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + I + + D ++ +S L + P ++ + + A +
Sbjct: 1 MNIKKKDFKNFILNLLNRISRHDITTYSAALSFYLLQASIPLMMVLVTVLSYFLAGK--E 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I P +K I D I +L + + + T++ L A + +++G+ L ++N A
Sbjct: 59 DIIFKFVDFLPNTTSKLIVDAINILLVSSQSPTVTTLTILFALWSATSGINKLINAINHA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI---------PLALAYVRKFFPAL 170
Y + + RL+S + L+ +V + + + F +
Sbjct: 119 YGLHNNKQAIKQRLMSIIFTLVFIFLIVFLLVFQIYGSSIIGIFNSQIIEKITVHFNTNI 178
Query: 171 GNLLLIIWNGR-----IYATMLALFIGLIFVHLFLPA---AKSKIMSILPGVIFTWISWV 222
+ L +I + L + + + + + P+ + + G +F I+
Sbjct: 179 QSALDMISSPLFKLFSYTVPFLIMALAVGLFYKYSPSNSKNRIRNREAFLGGLFVSIAIS 238
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +++++I FS S +Y LA I+ ++L ++ + ILGAE A+ Y +
Sbjct: 239 LATFIYSYFINNFSNQSLVYGALAGILALFIWLLIVSIILILGAECIAAYREGYKKD 295
>gi|325528119|gb|EGD05320.1| putative ribonuclease BN [Burkholderia sp. TJI49]
Length = 310
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 59/272 (21%), Positives = 107/272 (39%), Gaps = 13/272 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSADRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR----- 126
A I + A G+ T+ + AA +S +L +L+ + E R
Sbjct: 83 AAASIQTIVQNAHRAGQRGGIATLISFAALAVGASATFASLSAALSVIWPATESRWSSML 142
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RLISFG VL + L++ + A+ +V + +++ + + +
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFVGTWLLGDSPYVVVTNLIQFFVGI 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + FLP A+ G + + I + G LF Y+ T ++ +
Sbjct: 199 AVLAGAFAALMKFLPDARVAWRDAAVGGVVSAILFSGGKKLFALYLAHAGT-ASAFGAAG 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
S L++LY + +LGAE A+ + Y R
Sbjct: 258 SFAVLLMWLYFSALVLLLGAEFAAARGVAYRR 289
>gi|46205254|ref|ZP_00048800.2| COG1295: Predicted membrane protein [Magnetospirillum
magnetotacticum MS-1]
Length = 204
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+DI + F ++ ++A+ ++ LLS+FP I G + + + + G
Sbjct: 75 WDIAMRVYQEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLASLHG 134
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-FTI--SALAAAYFSSNGVEALRISLNRAYRVVEM 125
PE I +++ ++ + L T S + + ++ ++A+ +LN Y E
Sbjct: 135 VLPESAIDIIGEQVKRIATKGSGTLGLTFFTSLTLSLWSANAAMKAMFDALNVVYEEEEK 194
Query: 126 RSWYIT 131
R+++
Sbjct: 195 RNFFWL 200
>gi|160882656|ref|ZP_02063659.1| hypothetical protein BACOVA_00609 [Bacteroides ovatus ATCC 8483]
gi|237718430|ref|ZP_04548911.1| ribonuclease BN [Bacteroides sp. 2_2_4]
gi|260173878|ref|ZP_05760290.1| ribonuclease BN [Bacteroides sp. D2]
gi|293371424|ref|ZP_06617855.1| YihY family protein [Bacteroides ovatus SD CMC 3f]
gi|299149076|ref|ZP_07042138.1| YihY family protein [Bacteroides sp. 3_1_23]
gi|315922141|ref|ZP_07918381.1| ribonuclease BN [Bacteroides sp. D2]
gi|156111971|gb|EDO13716.1| hypothetical protein BACOVA_00609 [Bacteroides ovatus ATCC 8483]
gi|229452363|gb|EEO58154.1| ribonuclease BN [Bacteroides sp. 2_2_4]
gi|292633621|gb|EFF52179.1| YihY family protein [Bacteroides ovatus SD CMC 3f]
gi|298513837|gb|EFI37724.1| YihY family protein [Bacteroides sp. 3_1_23]
gi|313696016|gb|EFS32851.1| ribonuclease BN [Bacteroides sp. D2]
Length = 439
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 103/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +Y I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTVYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG E + I + L+ G+F + + + N V + I+ NR +
Sbjct: 88 QFRNGFGGNTETT-EAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS Y F LL + +V+ + + + L + F + +I
Sbjct: 147 EVKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFMSTILKQMDDFVLLAPVMKFMI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L I ++ L+ + + S Y+
Sbjct: 204 -RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPLFLLWLQISWTICLFGAEL 290
>gi|56552587|ref|YP_163426.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762169|ref|ZP_04760252.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|260753757|ref|YP_003226650.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|56544161|gb|AAV90315.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373419|gb|EER63019.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|258553120|gb|ACV76066.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 340
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/311 (18%), Positives = 117/311 (37%), Gaps = 39/311 (12%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + F II + +G+ A + + ALL++FPF++ +A +G
Sbjct: 19 RKRYAAFFRIIKQVASGVI-NNGFPHAGNFAYMALLTLFPFMILTIIVASTIGRGAAGFA 77
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ A P ++ ++ I QVL+ + L SAL + + S + ++R L R Y
Sbjct: 78 AVRSFLSALPPNVSSQLSGPIFQVLSTKSGSLIWWSALVSLWSVSGFIASIRELLYRTYH 137
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-------- 173
+ + RL + + A + + I+ + V I + F +
Sbjct: 138 MEPPTEFIRYRLGAMAINIGAVLMMFIILSIQVLIATLQNVFSQRFGWVMEYAKAALPHI 197
Query: 174 ------------------------------LLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+L I + I +L + ++F + P
Sbjct: 198 SLSDNHSLIDQLNLIGLTSDRIHAFFEHITILSIISRVISGGLLFGALYVLFYSITPPQY 257
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ PG T W + +++ + Y+ Y GLA + L++ +++G+ +
Sbjct: 258 RKARYYKWPGAFLTAFWWQMVSMILPIALNNMLDYNRSYGGLAGSVIVLIYFWIIGLGLV 317
Query: 264 LGAELNASMII 274
+G LNA++
Sbjct: 318 VGIHLNATLAF 328
>gi|306835095|ref|ZP_07468136.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304569010|gb|EFM44534.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 389
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 111/281 (39%), Gaps = 18/281 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---QFVPTVIDVVF 67
++ F + A+ ++ L++ P ++ ++A + + + +
Sbjct: 60 VMRRVWADFFHDALMDRAAAMTYFTLMAFAPTVLAAYSIATLVFSSRRGEVEALTTQFIE 119
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +A+ + + ++ +G +S L + + +S V A + N Y VE
Sbjct: 120 TYVPRSMAEEAGNIVSSIIGSTREGTFALVVSVLISLFAASAYVRAFSRTANTVYGRVEG 179
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFV---------FVAIPLALAY-VRKFFPALGNLLL 175
R T + + ++ + V++ V P+AL + G + +
Sbjct: 180 RGTIRTWALMWAITVVLVIGAVVVLCANLLRDTVVDSVIEPVALRLGLHGTVDFFGGIFM 239
Query: 176 IIWNGRIYATMLALFIGLIFV-HLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+WN + + + + LI V + F P + S+ I G + ++ +V F+ YI
Sbjct: 240 PVWNWLRFPITVVVALALIAVWYHFAPNVRPSRFRWITLGSVVALVTNLVVWGAFSLYIK 299
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ ++Y ++M + +++ ILG +++A ++
Sbjct: 300 YLAG-VSIYGAFGTVMAVFMTVWLSNTMLILGIKIDAEVLR 339
>gi|327403349|ref|YP_004344187.1| ribonuclease BN [Fluviicola taffensis DSM 16823]
gi|327318857|gb|AEA43349.1| ribonuclease BN [Fluviicola taffensis DSM 16823]
Length = 308
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 106/285 (37%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ +F ++ I + + ++ D + ++ + A+ S+ +V +AG + + V
Sbjct: 7 KTFFRSLWTITKNTAKDWIAADPFRQSAVVGYYAVFSIPALLVIIIAVAGLVFGEEAVQG 66
Query: 62 VID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRA 119
I + A A+ I I +V + I S GV L+ SLN+
Sbjct: 67 QISGQIKSALGTETAESIESIIAKVSEEKTSIIAAIIGFVTLIVGSTGVFTELQTSLNQI 126
Query: 120 YRVV--EMRSW---YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V + W TRL S G VL ++I + + ++ P +
Sbjct: 127 WEVQVVAKKKWLKTIKTRLFSLGLVLSLGFLMLISLLLTTGLEAFSEMIKTHLPDFMPFV 186
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
L N + + + + LP AK + + G + T + +++G Y
Sbjct: 187 LKTANF--ILSFAVITVLFALIFKILPDAKIQFRDVWIGAMVTTLLFILGKFGLGIYFAK 244
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++ Y S++ ++++ + GAE ++ +
Sbjct: 245 -ANPASAYGAAGSVVLIMLWVSYSCMILFFGAEFTKQYATFHGHE 288
>gi|303246520|ref|ZP_07332799.1| ribonuclease BN [Desulfovibrio fructosovorans JJ]
gi|302492230|gb|EFL52105.1| ribonuclease BN [Desulfovibrio fructosovorans JJ]
Length = 448
Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 106/264 (40%), Gaps = 4/264 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F++ G ++A+ +S + +LS+ PF+ ++A LG + + +
Sbjct: 39 FFHVLHLFLKNHGLSLAAALSYTTVLSIVPFLAVAFSVAKGLGF--YDSPQVHDLLMRIT 96
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + L + K L I + + + V + ++N A+ + R + T
Sbjct: 97 AGRAEVVEQIQLYIQNTNVKTLGAIGTVLLLVTAVSLVSTIEGAINAAWDIGVKRGFV-T 155
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R S+ +++ L+ + +A + R+ + + A +L ++
Sbjct: 156 RFTSYLLLIIICPPLLFAAVSAMAAVQDASLTRRLLEF-SLVQDVERIVLSVAPVLIVWT 214
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ FLP + K L G W + + + + Y+ +Y A I
Sbjct: 215 VFFVLYQFLPNTRVKPRCALIGAFCAGTLWQLVQWAYIKFQFGAAGYNAIYGSFAQIPLL 274
Query: 252 LVFLYMLGVFFILGAELNASMIIY 275
L++LY+ +LGA+++ + Y
Sbjct: 275 LLWLYISWAIVLLGAQISHTAQRY 298
>gi|296135831|ref|YP_003643073.1| ribonuclease BN [Thiomonas intermedia K12]
gi|295795953|gb|ADG30743.1| ribonuclease BN [Thiomonas intermedia K12]
Length = 421
Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 102/275 (37%), Gaps = 9/275 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID- 64
+ + F +++ A ++ + L+S+ P + + A + I
Sbjct: 8 DTLLASLRTLARRFAQDNLAQTAGSLTFTTLISLVPLLTVVLAVFTAFPAFDRMQGQIQA 67
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P+ I+ + + A AK L +S + +++ + + +LN +R
Sbjct: 68 HLAQTMLPDGISDKVYHYLSD-FAAKAKSLGVVSVVFLIVTATSMMLTVDRALNAIWRTP 126
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
RS L+ + L + L + + A + P + LL + +
Sbjct: 127 RPRSLAQRVLLYWAGFTLGPLVLGASIGLMSFVAGAHRGLLHHLPGGASALLSFASWAVM 186
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A LA F+P + + L G +++ +G Y T +TY+ +Y
Sbjct: 187 AVALAALF------RFIPNTEVRWRDALIGGFVAALAFSLGGRALAWYFSTVTTYTAVYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L+++Y + ++GA + A + R
Sbjct: 241 TFAALPLLLLWIYFSWIAVLVGAMIAAYLPSLRVR 275
>gi|255591092|ref|XP_002535436.1| conserved hypothetical protein [Ricinus communis]
gi|223523109|gb|EEF26946.1| conserved hypothetical protein [Ricinus communis]
Length = 747
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/236 (21%), Positives = 94/236 (39%), Gaps = 11/236 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIAKPITDEILQV 85
M + ++ L S+ P +V +AG+ Q + + G A+ I +
Sbjct: 1 MGAALAFYTLFSLAPILVLVLAIAGWFYGPQAAQGELFAQLRGLVGAQGAEAIQAVLAGA 60
Query: 86 LAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVVEM-----RSWYITRLISFGYV 139
L TI A A F + V A L+ SL+ ++V + TRL+SFG V
Sbjct: 61 RNKEEGRLATIVAGALLLFGATTVFAELKASLDAIWQVPPLTKGTVWDTIRTRLLSFGMV 120
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
L+ + L++ V A+ L + ++ G +L +I + + + + +
Sbjct: 121 LVLAFLLMVSLVVSAALTLLEKFWGSYWTDAGIVLTVIN---MVISFVVIAALFGVIFKM 177
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
LP K + G + T + +G YI S ++ Y S++ L++L
Sbjct: 178 LPRVKLSWHDVTIGAVGTAALFTIGKYAIGAYIGN-SGVASSYGAAGSMIALLLWL 232
>gi|89093622|ref|ZP_01166569.1| probable ribonuclease [Oceanospirillum sp. MED92]
gi|89082018|gb|EAR61243.1| probable ribonuclease [Oceanospirillum sp. MED92]
Length = 420
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 107/273 (39%), Gaps = 12/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
I F++ G A+ ++ + L +V P + + + + Q V + VF
Sbjct: 12 FIRYLFRQFLKNQGILNAAALTYTTLFAVVPLMTVSYAMLAAVPSFQGVGQELQGWVFDN 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + D + + + A+ L + A S ++ + + NR +RV E R
Sbjct: 72 FVPATGQVVQDYLNE-FSSQARKLTAVGVALLAVTSIMMMKNIEAAFNRIWRVTEPRK-- 128
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM--L 187
LL L + + + +Y+ P + ++ R+ + + +
Sbjct: 129 -----GLSSFLLYWAILSLGPILIGLGLVLTSYIAS-LPFINEATEVVGRARLLSLLPTI 182
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+++ +P + S L G + + + FT ++ F +Y +Y A+
Sbjct: 183 LSAAAFTLMYIAVPNCRVPFKSALLGGVVVALLFETAKRSFTAFVTQFPSYELIYGAFAA 242
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ L+++++ V ++GAEL +M +Y +
Sbjct: 243 VPLFLLWIFISWVIILMGAELTRTMAVYRPMDR 275
>gi|295700070|ref|YP_003607963.1| ribonuclease BN [Burkholderia sp. CCGE1002]
gi|295439283|gb|ADG18452.1| ribonuclease BN [Burkholderia sp. CCGE1002]
Length = 423
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 108/275 (39%), Gaps = 13/275 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWP 71
A+ F E MA+ I+ A S+ P +V +AG F G + + G
Sbjct: 23 MGALRQFTENRCLEMAASIAFYAAFSLAPTLVMVIAVAGWFFGPAAARGELFGHINGLIG 82
Query: 72 EVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRA--YRVVEMRS 127
+ A + + AKG IS A +S +L +LN Y S
Sbjct: 83 DQAAAGVQTIVENAHHAGAKGGIATIISFSLLAIGASATFSSLNSALNIVWPYTGPRTAS 142
Query: 128 WY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
W RLISFG VL + L++ + +A++ ++ ++I ++
Sbjct: 143 WLALVRVRLISFGLVLGVAFLLIVSLVL----DTVIAFIGEWLWGDSPYVVIGNLLQLGV 198
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L L + FLP A+ L G + + + G LF Y+ + ++ +
Sbjct: 199 GLLVLMFAFAALLKFLPDARVLWRDALVGGVVAAVLFTGGRKLFALYLAH-AGMASAFGA 257
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S+ L++LY + +LGAE +A+ + +
Sbjct: 258 AGSLAVLLMWLYFSALVLLLGAEFSAARGRLHDPR 292
>gi|310829421|ref|YP_003961778.1| putative ribonuclease BN [Eubacterium limosum KIST612]
gi|308741155|gb|ADO38815.1| putative ribonuclease BN [Eubacterium limosum KIST612]
Length = 272
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 112/269 (41%), Gaps = 2/269 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + I E D W + + +S +++ FP I+F N G QF
Sbjct: 1 MKNKTSKLTEFIIFMAEDMDRTDFWGICAQMSFYIIMAFFPLIIFLINFVGRF-IVQFKD 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ D++ P++ + I + A + I L +F++ A+ +N+ Y
Sbjct: 60 YLFDILKEYLPQLSYDYVRTLIDTLTKNLADNNY-ILVLFTFFFATLAARAIMTGMNQNY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E RS L+SF + +L +++++++ +V Y+ ++++
Sbjct: 119 GNHESRSHLKIWLLSFLFTILFAISIILIISAYVFSEAISEYILVRLGIDQFNIILMNIF 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ V++ P + + M LPG +F+ + + +F ++ + Y+
Sbjct: 179 TFIFSLVTSIFLFTCVYVLAPDRQLRFMQGLPGAVFSTLGINIAFRIFLMFMNHSTKYTL 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELN 269
+Y + LV +Y + V LG ++N
Sbjct: 239 LYGNFGGLFALLVGIYFVCVILNLGGKIN 267
>gi|255035378|ref|YP_003085999.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
gi|254948134|gb|ACT92834.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
Length = 424
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/283 (16%), Positives = 104/283 (36%), Gaps = 10/283 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
F ++ ++ F ++ +++ +S + S+ P ++ ++ F G F +
Sbjct: 3 RLKDFFTLMKESFSEFSNDNVLKLSAALSYYTIFSLAPMLLLIISIVSFFFGREAFEGEL 62
Query: 63 IDVVFGAWPEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ G + I I + + I + ++ ++ S+N +
Sbjct: 63 YGQIQGLVGKEAGAQIQQLIKNAAINDKSTTAAIIGGVTLLIGATGVFAEIQDSINYIWA 122
Query: 122 VVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ + RL+SF ++ LV+ V + L A + ++F + ++
Sbjct: 123 IKSKPRKGWVQYLKNRLLSFSLIITLGFLLVVTLGVNTLVDLLSARLERYFSEVSVVVFS 182
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ N + ++A ++F LP + L G FT + + +G + Y+ S
Sbjct: 183 VLNVALVLVIIAALFAVVF--KVLPDGHVRWKECLIGAGFTSLLFAIGKFAISFYLGQ-S 239
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y ASI+ L ++Y + GAE Y +
Sbjct: 240 DLGATYGASASIVILLTWIYYSSIILYFGAEFTKVFARYDGHE 282
>gi|312795954|ref|YP_004028876.1| ribonuclease BN [Burkholderia rhizoxinica HKI 454]
gi|312167729|emb|CBW74732.1| Ribonuclease BN (EC 3.1.-.-) [Burkholderia rhizoxinica HKI 454]
Length = 469
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/291 (17%), Positives = 103/291 (35%), Gaps = 18/291 (6%)
Query: 3 EYFCIVFDIIYDAIE----HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
+ F I D + E+ +A ++ + +LS+ P + L
Sbjct: 22 KKFDIDLDALKRLARFVATRSAEDRIPQVAGSLTFTTVLSLVPLVTVAFALFTAFPIFAS 81
Query: 59 VPTVID--VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ + P I I + Q A AKGL T+ + S + + +
Sbjct: 82 FQQSLQGFLADHLMPAQINSQIFKYLNQ-FAEKAKGLTTVGMITLVVTSVMTMMIVESAF 140
Query: 117 NRAYRVVEMRSWYITRLISFGYV----LLASVTLVIMSFVFV-------AIPLALAYVRK 165
N +RV + R L+ + + LL V+L + S++ +A A
Sbjct: 141 NTIWRVRKSRPLAQRILVYWAVITLGPLLIGVSLSVSSYLLTHSMLASTVANVAGAASAA 200
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
A + A + + +++LP + L G + I++ +
Sbjct: 201 SGAASRAMPAFAEWALTGAVLTLSVLAFTLSYVYLPNCRVAWRDALVGGLCAAIAFELAK 260
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
F YI TY+ +Y A+I L+++Y+ + + GA + +++
Sbjct: 261 RGFGLYIRRIPTYTAVYGAFATIPIFLLWVYLSWLITLFGAMVTSALPEIR 311
>gi|186473333|ref|YP_001860675.1| ribonuclease BN [Burkholderia phymatum STM815]
gi|184195665|gb|ACC73629.1| ribonuclease BN [Burkholderia phymatum STM815]
Length = 436
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 60/266 (22%), Positives = 103/266 (38%), Gaps = 13/266 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
+A++ F E AMA+ I+ A S+ P +V ++G F GA + V
Sbjct: 24 NAMKQFSENRCAAMAASIAFYAAFSLAPTLVMVIAVSGWFFGAEAARGELFRQVHAVLGN 83
Query: 73 VIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMRS--- 127
A +T + G S + A +S +L +LN + V R+
Sbjct: 84 DAAAAVTTIVQNAHRSGGAGGIAAIISFVLLAIGASATFASLNSALNIVWPSVAPRASSV 143
Query: 128 --WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ + ++I ++
Sbjct: 144 IALVRVRLISFGLVLGVAFLLIVSLVL----DTAITFIGNWIWGNSPYVVIGNLLQLGVG 199
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L + + FLP A + L G + G LF Y+ + + +
Sbjct: 200 WLVLAVAFAALLKFLPDAPVRWRDALVGGTVAAALFSAGKKLFALYLAH-AGMANSFGAA 258
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
S+ L++LY V +LGAE A+
Sbjct: 259 GSLAVLLMWLYFSAVVLLLGAEFAAA 284
>gi|298484069|ref|ZP_07002237.1| YihY family protein [Bacteroides sp. D22]
gi|295087661|emb|CBK69184.1| tRNA-processing RNAse BN [Bacteroides xylanisolvens XB1A]
gi|298269750|gb|EFI11343.1| YihY family protein [Bacteroides sp. D22]
Length = 439
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 103/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG E + I + L+ G+F + + + N V + I+ NR +
Sbjct: 88 QFRNGFGGNIETT-EAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS Y F LL + +V+ + + + L + F + +I
Sbjct: 147 EVKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFMSTILKQMDDFVLLAPIMKFMI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L I ++ L+ + + S Y+
Sbjct: 204 -RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPLFLLWLQISWTICLFGAEL 290
>gi|330816655|ref|YP_004360360.1| YihY family protein [Burkholderia gladioli BSR3]
gi|327369048|gb|AEA60404.1| YihY family protein [Burkholderia gladioli BSR3]
Length = 437
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 102/274 (37%), Gaps = 7/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L+V P + L + +
Sbjct: 8 LVTIRRLARFAAKRGAEDRIPQVAGSLTFTTILAVVPLVTVAFALFTAFPMFSSFQSSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I I + Q + AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQINNQIFKYLNQ-FSAKAKGLTTAGLIVLVVTSVMTMMTIESAFNVIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ + + L +S + + P + +
Sbjct: 127 RKSRPF-AQRVLAYWAFITLAPLLFGISLSISSYLFTKSLAIAGAPGATTSVEWLLTA-- 183
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A++ + ++++LP G I I++ + F +Y+ TY+ +Y
Sbjct: 184 -ASLPLTVLAFTLLYVYLPNCTVAWRDAAVGGICAAIAFELAKRGFGYYVRRIPTYTAVY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + + GA + +++ +
Sbjct: 243 GAFAAVPLFLLWMYLSWLITLAGAMVASALPVIR 276
>gi|294339996|emb|CAZ88359.1| putative Ribonuclease BN transmembrane protein [Thiomonas sp. 3As]
Length = 419
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 102/275 (37%), Gaps = 9/275 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID- 64
+ + F +++ A ++ + L+S+ P + + A + I
Sbjct: 8 DTLLASLRTLARRFAQDNLAQTAGSLTFTTLISLVPLLTVVLAVFTAFPAFDRMQGQIQA 67
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P+ I+ + + A AK L +S + +++ + + +LN +R
Sbjct: 68 HLAQTMLPDGISDKVYHYLSD-FAAKAKSLGVVSVVFLIVTATSMMLTVDRALNAIWRTP 126
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
RS L+ + L + L + + A + P + LL + +
Sbjct: 127 RPRSLAQRVLLYWAGFTLGPLVLGASIGLMSFVAGAHRGLLHHLPGGASALLSFASWAVM 186
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A LA F+P + + L G +++ +G Y T +TY+ +Y
Sbjct: 187 AVALAALF------RFIPNTEVRWRDALIGGFVAALAFSLGGRALAWYFSTVTTYTAVYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L+++Y + ++GA + A + R
Sbjct: 241 TFAALPLLLLWIYFSWIAVLVGAMIAAYLPSLRVR 275
>gi|288559252|sp|A1SB50|Y3404_SHEAM RecName: Full=UPF0761 membrane protein Sama_3404
Length = 323
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 108/276 (39%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ +F V+ + + E+ A H++ LLS+ P + ++ Q +
Sbjct: 10 IQSFFLGVWRFVLHLVSRLKEDQINVRAGHLTYVTLLSLVPMVAVTMSVLSAFPVFQGIR 69
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I+ V+ + I + + +KG + + + A+ SLN
Sbjct: 70 GTIETFVYENMIPAAGDTVQTYINEFVKNASKG-TAVGIGFLVVVAIMLISAIDKSLNAI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E R + + + + VL L+ S + ++L + + ++ ++
Sbjct: 129 WRTKEKRRFMVAFSM-YWMVLTLGPVLMGASIAVTSYLVSLKVLSE-----ADVYGVVPM 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ + +++ +P K K + L G + + + G F Y+ TF +Y
Sbjct: 183 LIEKLPLMFSVAAFLLLYMAVPNQKVKFLHALLGALVAALLFEAGKRGFALYVTTFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + G + A++ Y
Sbjct: 243 AIYGTLATIPILFVWVYLSWTIVLFGGVIAAALPEY 278
>gi|167836869|ref|ZP_02463752.1| YihY family protein [Burkholderia thailandensis MSMB43]
Length = 437
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 102/275 (37%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVVTAVMMMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + + I+ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSISSYLFTKSLAFTGSTSMPPIFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 182 AAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAAVAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++LY+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|323526753|ref|YP_004228906.1| ribonuclease BN [Burkholderia sp. CCGE1001]
gi|323383755|gb|ADX55846.1| ribonuclease BN [Burkholderia sp. CCGE1001]
Length = 436
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 100/277 (36%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A + E+ +A ++ + +L++ P L
Sbjct: 5 RFDLDTLKRLAQFAAKRSGEDRIAQVAGSLTFTTMLALVPLATVAFALFTAFPLFSSFQE 64
Query: 62 VIDVVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ P + I + Q A AKGL TI + + + + N
Sbjct: 65 SLQFFLADHLMPAQLNSQIFKYLNQ-FASKAKGLTTIGMVLLFLTGVMTMMTIESAFNVI 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R R++ + ++ L+ +S + + F A + +I
Sbjct: 124 WRVRKARP-IAQRILVYWAIITLGPILIGVSLSISSYLFTQSMT---FSAAQRMTPVIEW 179
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + ++++LP + + + G + I++ + F +Y+ TY+
Sbjct: 180 ALAGTALPLTALAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRMPTYT 239
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y +++ L+++Y+ + GA + +++
Sbjct: 240 AVYGAFSAVPLFLLWMYLCWFITLAGAMIASALPAIR 276
>gi|326799520|ref|YP_004317339.1| ribonuclease BN [Sphingobacterium sp. 21]
gi|326550284|gb|ADZ78669.1| ribonuclease BN [Sphingobacterium sp. 21]
Length = 387
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 104/283 (36%), Gaps = 10/283 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
++ F I+ +I F+E + M+ ++ + S+ P +V L GF G
Sbjct: 70 KKLMPKAFQILKASINGFMEHNVTKMSGSLAYYTVFSMAPLLVLVIALCGFFLGREAAEN 129
Query: 61 TVIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + + A I + I + + I A+ ++ ++ S+N
Sbjct: 130 QIYGQLSTFLDKNTALQIQEVIKNANINGSSTTAIVIGAVTLLIGATTVFADIQDSINHI 189
Query: 120 YRVVEM--RSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ + + W R +SF ++ S L++ + + + + + +
Sbjct: 190 WGIKPKPKKGWLKMLQNRFLSFSVIISLSFILLVSLLITTFLDSFSDRLSVRYENVSIVF 249
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I N T+ ++ + LP A+ + +L G T I +++G + YI
Sbjct: 250 FYILN--QVITLAVIWFIFAVIFKVLPDARIRWKDVLTGAFVTAILFILGKFAISFYIGR 307
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ S++ L++ Y + GAE + +I Y
Sbjct: 308 SGAGDA-FGSARSLVILLLWTYYSAMILYFGAEFTKAYVIAYG 349
>gi|221196915|ref|ZP_03569962.1| ribonuclease BN [Burkholderia multivorans CGD2M]
gi|221203585|ref|ZP_03576604.1| ribonuclease BN [Burkholderia multivorans CGD2]
gi|221177519|gb|EEE09947.1| ribonuclease BN [Burkholderia multivorans CGD2]
gi|221183469|gb|EEE15869.1| ribonuclease BN [Burkholderia multivorans CGD2M]
Length = 336
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 104/265 (39%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + +MA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 39 AFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 98
Query: 74 IAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR----- 126
A I + A G+ T+ + AA +S +L +LN + E R
Sbjct: 99 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVL 158
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RL+SFG VL + L++ + A+ ++ + +++ ++ +
Sbjct: 159 GLVRVRLVSFGLVLGVAFLLIVSLVL----DTAITFIGTWLLGDSPYVVVTNVLQLVVGV 214
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + FLP A G I + I + G LF Y+ T ++ +
Sbjct: 215 AVLAGAFSALLKFLPDAHVAWRDAAVGGIVSAILFSGGKKLFALYLARAGT-ASAFGAAG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY + +LGAE +A+
Sbjct: 274 SFAVLLMWLYFSALVLLLGAEFSAA 298
>gi|29346725|ref|NP_810228.1| ribonuclease BN [Bacteroides thetaiotaomicron VPI-5482]
gi|29338622|gb|AAO76422.1| ribonuclease BN [Bacteroides thetaiotaomicron VPI-5482]
Length = 439
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 102/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +Y I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTVYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG E + I + L+ G+F + + + N V + I+ NR +
Sbjct: 88 QFRSGFGGNTETT-EAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS Y F LL + +V+ + + + L + F + I
Sbjct: 147 EVKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFVSTVLKQMDDFVLLAPVMKFSI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L I ++ L+ + + S Y+
Sbjct: 204 -RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPLFLLWLQISWTICLFGAEL 290
>gi|253573082|ref|ZP_04850474.1| ribonuclease BN [Bacteroides sp. 1_1_6]
gi|251837339|gb|EES65438.1| ribonuclease BN [Bacteroides sp. 1_1_6]
Length = 439
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 103/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG E + I + L+ G+F + + + N V + I+ NR +
Sbjct: 88 QFRSGFGGNIETT-EAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS Y F LL + +V+ + + + L + F + +I
Sbjct: 147 EVKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFVSTVLKQMDDFVLLAPVMKFMI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L I ++ L+ + + S Y+
Sbjct: 204 -RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPLFLLWLQISWTICLFGAEL 290
>gi|237712832|ref|ZP_04543313.1| ribonuclease BN [Bacteroides sp. D1]
gi|262408811|ref|ZP_06085356.1| ribonuclease BN [Bacteroides sp. 2_1_22]
gi|294648195|ref|ZP_06725735.1| YihY family protein [Bacteroides ovatus SD CC 2a]
gi|294810773|ref|ZP_06769421.1| YihY family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229447160|gb|EEO52951.1| ribonuclease BN [Bacteroides sp. D1]
gi|262353022|gb|EEZ02117.1| ribonuclease BN [Bacteroides sp. 2_1_22]
gi|292636470|gb|EFF54948.1| YihY family protein [Bacteroides ovatus SD CC 2a]
gi|294442106|gb|EFG10925.1| YihY family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 439
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 103/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG E + I + L+ G+F + + + N V + I+ NR +
Sbjct: 88 QFRNGFGGNIETT-EAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS Y F LL + +V+ + + + L + F + +I
Sbjct: 147 EVKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFMSTILKQMDDFVLLAPIMKFMI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L I ++ L+ + + S Y+
Sbjct: 204 -RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPLFLLWLQISWTICLFGAEL 290
>gi|160880810|ref|YP_001559778.1| ribonuclease BN [Clostridium phytofermentans ISDg]
gi|160429476|gb|ABX43039.1| ribonuclease BN [Clostridium phytofermentans ISDg]
Length = 266
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 105/276 (38%), Gaps = 17/276 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + I I+ F E D A+ + + + +
Sbjct: 3 HKILNHILAFIQRFNEHDITGSAAKATYYL----------LLSFFPLCLLLLPLFDDTRI 52
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P +A + D + LA S + + +S + AL + AY +
Sbjct: 53 LTIFLPSSVAVLLEDIVKPELAFQTT-----SIVIILWSASASIWALMTGIYTAYTGEKK 107
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ + + + L++ V + + ++ + F L L+ R+
Sbjct: 108 LKLIQGRIRAILLIFILVAALLLCVSVTIFSKSLIYWIIEDFVHLSYGLM--NGLRLVIL 165
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L ++ +I ++ F P K ++ SI G I T I WV+ F Y+ F+ YS +Y +
Sbjct: 166 ILIIYFIVICLYQFTPNLKVRVRSISIGAIITAIGWVITTWGFEVYMKLFNNYSALYGSI 225
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ + ++LY++ + + GAE+N + K+
Sbjct: 226 GAFLGLTLWLYIVSIVLLCGAEINVMLSERRNEKED 261
>gi|298386622|ref|ZP_06996178.1| YihY family protein [Bacteroides sp. 1_1_14]
gi|298260999|gb|EFI03867.1| YihY family protein [Bacteroides sp. 1_1_14]
Length = 439
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 103/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG E + I + L+ G+F + + + N V + I+ NR +
Sbjct: 88 QFRSGFGGNIETT-EAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS Y F LL + +V+ + + + L + F + +I
Sbjct: 147 EVKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFVSTVLKQMDDFVLLAPVMKFMI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L I ++ L+ + + S Y+
Sbjct: 204 -RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPLFLLWLQISWTICLFGAEL 290
>gi|88810285|ref|ZP_01125542.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
gi|88791915|gb|EAR23025.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
Length = 466
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 105/274 (38%), Gaps = 6/274 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
V + Y + A+ + + LLS+ P + ++ G H + ++
Sbjct: 32 FVLRLGYAVLRDLSRGQLMLQATSLVYTTLLSLVPLLAVSFSVLKAFGVHNQIEPALNQF 91
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A+ I V V L ++ Y ++ + + N + + R
Sbjct: 92 LAPLGPKGAEITQRIIEFVENVQVGVLGSLGLALLLYTVVGLMQKIERAFNELWHIRHQR 151
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +L S +L ++I + + + + + + A+ L L I
Sbjct: 152 AP--AQLFSDYLSVLLVGPVLIFTALGITAAVFGSETVQQLSAVQPLGLAIELITRIVPF 209
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + F++ F+P + ++ S L G + I W + +F I T S Y+ +Y+ A
Sbjct: 210 LLIIGAFTFIYAFVPNTRVQVSSALVGGMVAGILWQITGWIFAAVIATSSKYTAIYSAFA 269
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ +++LY+ + ++G +++ Y+ +
Sbjct: 270 GLILFMMWLYLSWLILLIG----SNIAYYHQHPR 299
>gi|221214918|ref|ZP_03587886.1| ribonuclease BN [Burkholderia multivorans CGD1]
gi|221165145|gb|EED97623.1| ribonuclease BN [Burkholderia multivorans CGD1]
Length = 442
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 100/273 (36%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
+ + A E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + R++++ ++ L +S + + F I+
Sbjct: 128 KPRPF-AQRVLAYWALITLGPLLFGVSLSLSSYLFTQSLA---FTGAAPSTSIVEWLLTL 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A++ + ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 184 ASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWMYLSWFIALLGAMVTSALPAIR 276
>gi|153808297|ref|ZP_01960965.1| hypothetical protein BACCAC_02585 [Bacteroides caccae ATCC 43185]
gi|149129200|gb|EDM20416.1| hypothetical protein BACCAC_02585 [Bacteroides caccae ATCC 43185]
Length = 439
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 103/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG E + I + L+ G+F + + + N V + I+ NR +
Sbjct: 88 QFRNGFGGNIETT-EAILSFVNSYLSQTKGGVFIGVGLVMLLWTVINLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS Y F LL + +V+ + + + L + F + +I
Sbjct: 147 EVKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFMSTILKQMDDFVLLAPVMKFMI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L I ++ L+ + + S Y+
Sbjct: 204 -RLIPFVLTWMMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPLFLLWLQISWTICLFGAEL 290
>gi|221197719|ref|ZP_03570765.1| ribonuclease BN [Burkholderia multivorans CGD2M]
gi|221204723|ref|ZP_03577740.1| ribonuclease BN [Burkholderia multivorans CGD2]
gi|221175580|gb|EEE08010.1| ribonuclease BN [Burkholderia multivorans CGD2]
gi|221181651|gb|EEE14052.1| ribonuclease BN [Burkholderia multivorans CGD2M]
Length = 442
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 100/273 (36%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
+ + A E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + R++++ ++ L +S + + F I+
Sbjct: 128 KPRPF-AQRVLAYWALITLGPLLFGVSLSLSSYLFTQSLA---FTGAAPSTSIVEWLLTL 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A++ + ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 184 ASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWMYLSWFIALLGAMVTSALPAIR 276
>gi|255693902|ref|ZP_05417577.1| YihY family protein [Bacteroides finegoldii DSM 17565]
gi|260620267|gb|EEX43138.1| YihY family protein [Bacteroides finegoldii DSM 17565]
Length = 439
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 103/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G + +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFNNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG E + I + L+ G+F I + + N V + I+ NR +
Sbjct: 88 QFRNGFGGNTETT-EAILSFVDSYLSQTKGGVFIGIGLVMLLWTVINLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS Y F LL + +V+ + + + L + F + +I
Sbjct: 147 EVKKARSMYRKITDYFSMFLLMPILIVVSGGLSIFMSTMLKQMDDFVLLAPIMKFMI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L + ++ L+ + S Y+
Sbjct: 204 -RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGVLAGTAYQAFQYLYISSQLGVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPLFLLWLQISWTICLFGAEL 290
>gi|167582142|ref|ZP_02375016.1| YihY family protein [Burkholderia thailandensis TXDOH]
Length = 437
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 101/275 (36%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVVTAVMTMMTVESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A I+ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSISSYLFTKSLAFAGSTSTPPIFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 182 TAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAAVAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L+++Y+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWMYLSWFVTLAGAMIASALPAIR 276
>gi|161524966|ref|YP_001579978.1| ribonuclease BN [Burkholderia multivorans ATCC 17616]
gi|189350287|ref|YP_001945915.1| BN-like family ribonuclease [Burkholderia multivorans ATCC 17616]
gi|160342395|gb|ABX15481.1| ribonuclease BN [Burkholderia multivorans ATCC 17616]
gi|189334309|dbj|BAG43379.1| BN-like family ribonuclease [Burkholderia multivorans ATCC 17616]
Length = 442
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 100/273 (36%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
+ + A E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + R++++ ++ L +S + + F I+
Sbjct: 128 KPRPF-AQRVLAYWALITLGPLLFGVSLSLSSYLFTQSLA---FTGAAPSTSIVEWLLTL 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A++ + ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 184 ASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWMYLSWFIALLGAMVTSALPAIR 276
>gi|170732784|ref|YP_001764731.1| ribonuclease BN [Burkholderia cenocepacia MC0-3]
gi|169816026|gb|ACA90609.1| ribonuclease BN [Burkholderia cenocepacia MC0-3]
Length = 442
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 103/273 (37%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
+ + A E+ +A ++ + LL++ P + L F ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + R++++ ++ ++ V ++I L F G ++
Sbjct: 128 KPRPF-AQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAGPSTSMVEWLLAL 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A++ + ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 184 ASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|288559246|sp|A9BMQ0|Y4966_DELAS RecName: Full=UPF0761 membrane protein Daci_4966
Length = 417
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + +L++ PF L V V++ ++ PE I
Sbjct: 30 ERFREDRLGVTASSLTFTTVLALVPFFTVALALFTAFPIFSRVQIVLERWLIDSLIPETI 89
Query: 75 AKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + + Q + ++ G+ S L + + + +LN +RV ++R L
Sbjct: 90 ARQVLGYLTQFASKASQLGMAGFSIL--VITAVALILTIDRTLNNIWRVRQLRPLGQRVL 147
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I Y ++ +++ V ++ R AL L I++ Y LAL G+
Sbjct: 148 I---YWAAITLGPLVLGLSLVLSSYVMSASRGLVNALPEGLRFIFDSIEY---LALAAGM 201
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ ++P + G +F + Y+ + TYS +Y A++ L+
Sbjct: 202 AGLYHYVPNTAVRWRHAWVGGLFVATCMELAKKALGLYLASVPTYSVIYGTFATLPILLI 261
Query: 254 FLYMLGVFFILGAELNASMII 274
++YM + +LGA + A + I
Sbjct: 262 WIYMAWIIVLLGAVVTAYLPI 282
>gi|312797015|ref|YP_004029937.1| ribonuclease BN [Burkholderia rhizoxinica HKI 454]
gi|312168790|emb|CBW75793.1| Ribonuclease BN (EC 3.1.-.-) [Burkholderia rhizoxinica HKI 454]
Length = 355
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 62/284 (21%), Positives = 115/284 (40%), Gaps = 12/284 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
MR + + D + +++++ MA+ I+ S+ P +V +AGF G
Sbjct: 72 MRSRAMDLLAWVSDPVTYWIKDRCPTMAASIAFYTAFSLAPTLVIVIAVAGFFFGQDAVQ 131
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNR 118
+ + G + A+ + + T +S L +S L +LN
Sbjct: 132 GRLFGEIRGVVGDEAAQGVQAIVANAWHADRATHTTMVSILGIVIGASATFSTLNSALNA 191
Query: 119 AYRVVE--MR----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+ V E R S RLISFG VL + +V++ + I +A + F+
Sbjct: 192 IWPVPEPDTRASLLSVVRVRLISFGLVLGVAFLIVVLLILDTVISVAGHW---FWGPQSA 248
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
LI + AT+ +L++ + F+P A + L G + + + G +F Y+
Sbjct: 249 SYLIANAVQHVATLGSLWLAFSAMLKFVPDASLQWRDALAGGLAAALLFSGGKNIFAFYL 308
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
T + + S+ L++LY F+LGAE++A+
Sbjct: 309 AHVGT-ANTFGAAGSLAVLLMWLYFSSSVFLLGAEVSATAARRR 351
>gi|254441587|ref|ZP_05055080.1| Ribonuclease BN-like family [Octadecabacter antarcticus 307]
gi|198251665|gb|EDY75980.1| Ribonuclease BN-like family [Octadecabacter antarcticus 307]
Length = 254
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 87/210 (41%), Gaps = 9/210 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F++ ++ E++ +++ ++ L ++FP I +L G V T +D++ G
Sbjct: 7 FEVARQVLDDLSEKNAGLISAGVAFYGLFAIFPGIAATISLFGIFADPVVVETQLDLMAG 66
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
PE + +I +L+ + L +S A + + GV AL LN +
Sbjct: 67 LMPEGVFVLFQTQIDGLLSAGSATLGLTTLVSIGLALWSARTGVAALIRGLNAIFD-RPN 125
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ + ++ + V P+ LA + P + +++ R
Sbjct: 126 RGSIRHIFVALLLTICLVGIAIVALLMVVVAPIFLAVI----PFETDQAVLLELVRWSLV 181
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGV 214
+ LFIGL ++ + P + +++ + PG
Sbjct: 182 IAVLFIGLGLLYRYGPNRRYARMGWVTPGA 211
>gi|83721597|ref|YP_443133.1| YihY family protein [Burkholderia thailandensis E264]
gi|257139363|ref|ZP_05587625.1| YihY family protein [Burkholderia thailandensis E264]
gi|83655422|gb|ABC39485.1| YihY family protein [Burkholderia thailandensis E264]
Length = 437
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 101/275 (36%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVVTAVMTMMTVESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A I+ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSISSYLFTKSLAFAGSTSTPPIFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 182 TAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAAVAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L+++Y+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWMYLSWFVTLAGAMIASALPAIR 276
>gi|115351390|ref|YP_773229.1| putative ribonuclease BN [Burkholderia ambifaria AMMD]
gi|115281378|gb|ABI86895.1| tRNA-processing RNAse BN [Burkholderia ambifaria AMMD]
Length = 443
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 101/274 (36%), Gaps = 7/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFSSFQISLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNVQIFKYLNQ-FAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ ++ ++ V ++I L F I+
Sbjct: 127 RKPRPF-AQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAAPSTSIVEWLLA 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 183 LVSLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 243 GAFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|206559830|ref|YP_002230594.1| putative tRNA processing exoribonuclease [Burkholderia cenocepacia
J2315]
gi|198035871|emb|CAR51762.1| putative tRNA processing exoribonuclease [Burkholderia cenocepacia
J2315]
Length = 439
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/277 (15%), Positives = 104/277 (37%), Gaps = 5/277 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M + + A E+ +A ++ + +L++ P + L F
Sbjct: 1 MSVDLDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLAIVPLVTVAFALFTAFPMFASFQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + + L A AKGL T + S + + + N
Sbjct: 61 ISLQGFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLI 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + R++++ ++ ++ V ++I L F G I+
Sbjct: 121 WRVRKPRPF-AQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAGPSTSIVEW 176
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
A++ + ++++LP + G +F I++ + F +Y+ TY+
Sbjct: 177 LLALASLPLTVLAFTLLYVYLPNCAVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYT 236
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y A++ L+++Y+ +LGA + +++
Sbjct: 237 AVYGAFAALPVFLLWVYLSWFIALLGAMVASALPAIR 273
>gi|302866196|ref|YP_003834833.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|315502754|ref|YP_004081641.1| ribonuclease bn [Micromonospora sp. L5]
gi|302569055|gb|ADL45257.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|315409373|gb|ADU07490.1| ribonuclease BN [Micromonospora sp. L5]
Length = 333
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 3/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA F DG++ + ++L L+V PF++ L LG + V D V
Sbjct: 33 WCLLRDAFIRFRYGDGFSHSRALALQLCLAVVPFLIALTGLITDLGVDEGGKVVADTVLA 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D + G T+ L + + + NR Y V R
Sbjct: 93 ITPGQSEAMVQDLLTDSERTEDAGELALTLGLLTGLVALTTTMAQIERGANRIYGVERDR 152
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
L + ++A V + + V VR+ + + R ++
Sbjct: 153 PALAKYLRAAVLAVVAGVPALAGFLILVGGRAMGESVRRHYEWGDVAMAGWDVIRWPLSL 212
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + P + + + G W + ++L Y+ + Y L
Sbjct: 213 GLTVLAVAVLFRHAPRRRQPGLSWLFFGASIAIAIWWLASLLLAAYVKYSGGFGQTYGAL 272
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+M L++ + G+ G A +
Sbjct: 273 TGMMALLLWANLTGIALFGGLAFAAQLEAMR 303
>gi|226945729|ref|YP_002800802.1| Ribonuclease BN-like protein [Azotobacter vinelandii DJ]
gi|259552132|sp|C1DRV2|Y3681_AZOVD RecName: Full=UPF0761 membrane protein Avin_36810
gi|226720656|gb|ACO79827.1| Ribonuclease BN-like protein [Azotobacter vinelandii DJ]
Length = 408
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 105/281 (37%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ F D E F+ + G A+ ++ +AL +V P + + + Q +
Sbjct: 1 MRQRFVDSLDFWRYLFERFLADQGPKSAAALTYTALFAVVPIMTLIFVVLSVVPDFQGIG 60
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I +F + + D + + L + + + + + N
Sbjct: 61 EQIQGFIFRNFVPSSGAVLQDYLRTFIEQARH-LTWLGVGVLMVTALLMLMTVEHTFNTI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV R + L+ + +L L+ F +L+ V + G +L+
Sbjct: 120 WRVRRPRRGLSSFLLHWA-ILSLGPLLLGTGFALSTYITSLSLVSDPYALAGARMLL--- 175
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L +++ +P + L G +F + + LF Y+ F TY
Sbjct: 176 --KVMPLLFSTAAFTLLYVAVPNTAVPLRHALLGGLFAAVLFEAAKGLFGLYVALFPTYQ 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++Y+ + +LGAEL ++ ++
Sbjct: 234 LIYGAFAAVPLFLLWMYLSWMIVLLGAELVCNLSASRRWRR 274
>gi|91784445|ref|YP_559651.1| ribonuclease BN [Burkholderia xenovorans LB400]
gi|123062706|sp|Q13WE0|Y3061_BURXL RecName: Full=UPF0761 membrane protein Bxeno_A3061
gi|91688399|gb|ABE31599.1| tRNA-processing RNAse BN [Burkholderia xenovorans LB400]
Length = 436
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 103/277 (37%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A + E+ +A ++ + +LS+ P L
Sbjct: 5 RFDLDTLKRLAQFAAQRSSEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFASFQM 64
Query: 62 VIDVVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + P + I + + Q A AKGL TI + + + + + N
Sbjct: 65 SLQIFLADHLMPAQLNSQIFNYLNQ-FASKAKGLTTIGMIFLFVTAVMTMMTVESAFNVI 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R R++ + ++ L+ +S + + F A + +I
Sbjct: 124 WRVRKARP-IAQRILVYWAIITLGPILIGVSLSISSYLFTQSMT---FTAAQRMTPVIEW 179
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
A + ++++LP + + + G + I++ + F +Y+ TY+
Sbjct: 180 ALAGAALPLTAAAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRIPTYT 239
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y A++ L+++Y+ + GA + +++
Sbjct: 240 AVYGAFAAVPLFLLWMYLCWFITLAGAMIASALPAIR 276
>gi|218887767|ref|YP_002437088.1| ribonuclease BN [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758721|gb|ACL09620.1| ribonuclease BN [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 561
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 106/265 (40%), Gaps = 9/265 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
FV++ AS ++++ +LS+ PF+ ++ LG H T + ++ +
Sbjct: 50 FVDDQCLLRASALTMTFVLSMVPFLAVVFSITKGLGVHNAEATQMLLLR--LAAGNPDTV 107
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ V A + +SA + + + S N ++V + RS + R + +
Sbjct: 108 ARILEYVERTSAGRMGAVSAAFLLVTAGMLMANIERSFNAIWKVRQGRSAW--RKFTDFF 165
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
++ L++ + + L V + + + + +F+ L+F++
Sbjct: 166 SVMLVCPLLMGTAFTLGASLRSGKVLGRLLEVAPVGAVYLLLLKLVPLFMVFVVLLFLYS 225
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
++P + + + + G + ++W + + F++Y +Y A + L++LY+
Sbjct: 226 YIPNTRVRPRAAMAGALLAAMAWQGAEYAYMVWQARFASYGLIYGSFAQVPLFLMWLYVS 285
Query: 259 GVFFILGAEL-----NASMIIYYWR 278
+ G E+ NA + R
Sbjct: 286 WAVVLFGVEVCHAVQNAPTFEKHLR 310
>gi|255535679|ref|YP_003096050.1| Ribonuclease BN [Flavobacteriaceae bacterium 3519-10]
gi|255341875|gb|ACU07988.1| Ribonuclease BN [Flavobacteriaceae bacterium 3519-10]
Length = 338
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 102/259 (39%), Gaps = 4/259 (1%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVIAKPITD 80
A+ IS S LS+FPFI+F +L +L + + I ++ +P I + ++
Sbjct: 50 QIGRSAASISWSFFLSLFPFILFLLSLLPYLPHYDKLQFYIFEVLMLNVFPAHIQQEVSG 109
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I + + + T++ + A F+ NG +L N R ++FG +
Sbjct: 110 YINSFIIPNMQNISTLTIVFAMVFAVNGTHSLINGFNL--NTNLQRGAVKEYFVAFGITI 167
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
++ F + L + + + + I L +
Sbjct: 168 AFIFLIIASLFGVYYSEVVLKLFTPEINISWLVRNMTKIIGFISFPVFYLILLALFYWVG 227
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ LPG + T + ++V F Y+ F+TY+ +Y + +I+ ++++ + +
Sbjct: 228 CLKITSFKQALPGAVLTTLLFIVLTYFFAIYVRNFATYNVLYGSIGTIILVMIWVNLNII 287
Query: 261 FFILGAELNASMIIYYWRK 279
+LG ELN ++ K
Sbjct: 288 LILLGNELNIAIKKVRVEK 306
>gi|255065392|ref|ZP_05317247.1| YihY family protein [Neisseria sicca ATCC 29256]
gi|255050217|gb|EET45681.1| YihY family protein [Neisseria sicca ATCC 29256]
Length = 429
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 8/266 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
VF + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 34 VFAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 93
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 94 NQTIVPQGADMVFDYI-NAFRNQAGKLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQR 152
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V + + + F P LL +AT+
Sbjct: 153 PWMMQFLVYWALLTFGPLSLGVGISFMV-GSVQDSALASFAPQWVVGLLQTLGTLFFATL 211
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L ++ F+P G + T LF Y+ F Y ++Y A
Sbjct: 212 L-----LWGLYRFVPNRFVPGRHAFIGALVTAFCLETARFLFAWYMGNFDGYRSIYGAFA 266
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
++ LV+L +L + GA L +S+
Sbjct: 267 AVPFFLVWLNLLWTLVLGGAVLTSSL 292
>gi|325914257|ref|ZP_08176607.1| tRNA-processing RNAse BN [Xanthomonas vesicatoria ATCC 35937]
gi|325539512|gb|EGD11158.1| tRNA-processing RNAse BN [Xanthomonas vesicatoria ATCC 35937]
Length = 425
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 27 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFVPG 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 87 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M F+
Sbjct: 140 -KVTRFLIYWTVLTLGTMLAAAAMAMAAYVFALPLFRTTEGQWLAGFAWRL-APMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMSAFRYQPE 286
>gi|121593612|ref|YP_985508.1| putative ribonuclease BN [Acidovorax sp. JS42]
gi|120605692|gb|ABM41432.1| tRNA-processing RNAse BN [Acidovorax sp. JS42]
Length = 429
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 107/258 (41%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + LLS+ PF+ + + V+ +V P+ I
Sbjct: 33 ERFREDRLGLTASSLTFTTLLSLVPFVTVALAMFTVFPMFAEMQLVLQRWLVDSLVPDSI 92
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++P+ + Q A A GL + + + +LN +RV +R + + +
Sbjct: 93 SRPVLGYLTQ-FAAKAHGLGAAGLSILMVTALALILTIDRTLNNIWRVQRLRP--LGQRV 149
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L LV+ + + + +A A R L ++++ L G+
Sbjct: 150 LIYWAALTLGPLVLAASLALTTSVASAASRGIGDTLPGGARLLFDA---IEFFVLAAGMA 206
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F + + + + Y+ + TYS +Y A++ L++
Sbjct: 207 ALYRYVPNTQVHWRHAWAGGVFVAVGIELAKKVLSLYLASVPTYSVLYGTFATLPILLLW 266
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 267 VYVAWVIVLLGAVVAAYL 284
>gi|160891871|ref|ZP_02072874.1| hypothetical protein BACUNI_04329 [Bacteroides uniformis ATCC 8492]
gi|156858349|gb|EDO51780.1| hypothetical protein BACUNI_04329 [Bacteroides uniformis ATCC 8492]
Length = 446
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 103/262 (39%), Gaps = 6/262 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ IY I F ++ AS ++ S LL++ P + +A G + + I F
Sbjct: 41 IIKTIYLCINRFTKDRIVNKASALTYSTLLAIVPILAILFAIARGFGFDNLMESQIVNGF 100
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G P + I + L+ G+F + + + N + + I+ NR ++V + R
Sbjct: 101 GG-PTETTEVILQFVNSYLSQTKSGIFIGVGLIMLLWTVLNLINNMEITFNRIWQVKKAR 159
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S Y F +LL + LV+ + + + + + F ++
Sbjct: 160 SMYRKITDYFSMLLLMPILLVVSGGLSIFMSTMVKNLEDFTLLAPVGKFMV----RLIPF 215
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + +++F+P K K+ L I + L+ + S Y+ +Y A
Sbjct: 216 VLTWFMFTALYVFMPNTKVKLKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYGSFA 275
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ L++L + + GAEL
Sbjct: 276 ALPMFLLWLQVSWTICLFGAEL 297
>gi|170703573|ref|ZP_02894322.1| ribonuclease BN [Burkholderia ambifaria IOP40-10]
gi|170131516|gb|EDT00095.1| ribonuclease BN [Burkholderia ambifaria IOP40-10]
Length = 443
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 101/274 (36%), Gaps = 7/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFSSFQISLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNVQIFKYLNQ-FASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ ++ ++ V ++I L F I+
Sbjct: 127 RKPRPF-AQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAAPSTSIVEWLLA 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 183 LVSLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 243 GAFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|13472171|ref|NP_103738.1| hypothetical protein mll2378 [Mesorhizobium loti MAFF303099]
gi|14022916|dbj|BAB49524.1| mll2378 [Mesorhizobium loti MAFF303099]
Length = 339
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/287 (17%), Positives = 109/287 (37%), Gaps = 10/287 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR V+ ++ ++I F+ ++ + + ++ A S+ P ++ +AG + H
Sbjct: 1 MRPSIRDVWGLVRESIVGFINDNALSHGAAMAFYATTSLAPILLIVVAIAGLVFGHDAAE 60
Query: 61 TVIDV-VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNR 118
+ + G A + + + + + +++GV ++ SLN
Sbjct: 61 LALSAQISGLMGPESADLLKTALQSASSRLSGTWAAAIGIVTLLVAASGVFGEMQQSLNM 120
Query: 119 AYRVVEMRS----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
++V S R+ S G V L++ AI + P +L
Sbjct: 121 IWKVEPQGSSLSRLVRARVASLGLVAALGFLLLVSLVASAAISALGNTINAHLPFGTIVL 180
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+I +A + +F ++ LP + G + T + + +G L YI T
Sbjct: 181 GMINAVVSFALISVMFAA---IYKVLPDRTLAWGDVGLGAVLTALLFTLGKSLIGWYIGT 237
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S ++ Y ++ L+++Y F+LGAE + I + +
Sbjct: 238 -SAVASSYGAAGGLLVILLWVYYTSEIFLLGAEFTRAYSIRHGSRSD 283
>gi|189467044|ref|ZP_03015829.1| hypothetical protein BACINT_03427 [Bacteroides intestinalis DSM
17393]
gi|189435308|gb|EDV04293.1| hypothetical protein BACINT_03427 [Bacteroides intestinalis DSM
17393]
Length = 438
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 104/265 (39%), Gaps = 6/265 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + + +
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNKASALTYSTLLAIVPILAILFAIARGFGFDNLMESQVR 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV 123
+ FG + I + L+ G+F + + + N + ++ I+ NR + +
Sbjct: 91 MGFGG-HNQTTEVILQFVNSYLSQTKSGIFIGVGLIMLLWTVINLISSIEITFNRIWEIK 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RS Y F LL + +VI + + + +L Y+ F L +I
Sbjct: 150 KARSMYRKITDYFSMFLLMPILIVISGGLSIFMSTSLKYIEDFVLLAPILKFLI----RL 205
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + +++++P K + L I + L+ + S Y+ +Y
Sbjct: 206 IPFVLTWFMFTGLYIYMPNTKVRFKPALISGILAGTAHQAFQFLYISGQLWVSRYNAIYG 265
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + + GAEL
Sbjct: 266 SFAALPLFLLWLQISWTICLFGAEL 290
>gi|172060429|ref|YP_001808081.1| ribonuclease BN [Burkholderia ambifaria MC40-6]
gi|171992946|gb|ACB63865.1| ribonuclease BN [Burkholderia ambifaria MC40-6]
Length = 443
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 101/274 (36%), Gaps = 7/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFSSFQISLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNVQIFKYLNQ-FAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ ++ ++ V ++I L F I+
Sbjct: 127 RKPRPF-AQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAAPSTSIVEWLLA 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 183 LVSLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 243 GAFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|221133917|ref|ZP_03560222.1| ribonuclease BN [Glaciecola sp. HTCC2999]
Length = 297
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 101/260 (38%), Gaps = 8/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
+ + A H++ +LLS+ PFI+ + A + ++ +F +
Sbjct: 27 FLARCANDKVTVSAGHLAYVSLLSLVPFIMVFFTMLSAFPAFAEIRLALESFIFNNFVPT 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + + A G+ + + + + + +LN +R E R T
Sbjct: 87 SGDVLQKYISEFVGN-ASGMGAVGIASLMVVALLLIMNIDKTLNTIWRTPEARPRMFTFA 145
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L + + V + +Y ++ P LG LLL + G
Sbjct: 146 VYWMVITLGPIMMGSSILVSSYLLGFASYAEEYTPGLGTLLL------KMVPSVTATFGF 199
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ +++ +P + K L G I + + F Y+ +F +Y +Y LA I V
Sbjct: 200 LILYMLVPNTRVKFSHALCGAILATFLFELSKKGFAFYVASFPSYQVIYGALAVIPILFV 259
Query: 254 FLYMLGVFFILGAELNASMI 273
++Y+ + ++GAE S+
Sbjct: 260 WVYLSWIVVLVGAEFTCSID 279
>gi|21230334|ref|NP_636251.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769672|ref|YP_244434.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. campestris str. 8004]
gi|32699642|sp|Q8PC75|Y860_XANCP RecName: Full=UPF0761 membrane protein XCC0860
gi|81175005|sp|Q4URA9|Y3370_XANC8 RecName: Full=UPF0761 membrane protein XC_3370
gi|21111886|gb|AAM40175.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66575004|gb|AAY50414.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. 8004]
Length = 425
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 27 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFVPG 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 87 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M F+
Sbjct: 140 -KVTRFLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAWRL-APMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHAVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMSAFRYQPE 286
>gi|332967833|gb|EGK06932.1| YihY family protein [Kingella kingae ATCC 23330]
Length = 410
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 99/264 (37%), Gaps = 10/264 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFG 68
+ + F E A ++ + LL++ P + + V + +D V
Sbjct: 19 RFLLFLVHRFGEAGISQTAGSLTFTTLLALIPLLTVMLVVITAFPMFGDVSASFMDFVHR 78
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A + + + + A + TI LA S + + + NR +RV + RS
Sbjct: 79 TIVPSGASAVASYLDE-FKMQAGKMTTIGVLAMMVTSIMLIHTIDATFNRIWRVQKQRSM 137
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + +G L+ + +FV + L+ + F + + ++
Sbjct: 138 LVRLPVYWG--------LLTLGPIFVGVSLSASASLLHFGQAVEPNWFTSSLQSLGQIVL 189
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ L+ + +P + G + + + F YI F++Y+ +Y A+I
Sbjct: 190 NALILLLFYYGVPNCYVPLRDAAIGASVASVLFTLAKYGFGLYISNFNSYALIYGAFAAI 249
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
L++L ++ + GA + AS+
Sbjct: 250 PIFLIWLNLVWTIILGGALIAASI 273
>gi|296158116|ref|ZP_06840948.1| ribonuclease BN [Burkholderia sp. Ch1-1]
gi|295891452|gb|EFG71238.1| ribonuclease BN [Burkholderia sp. Ch1-1]
Length = 439
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 102/277 (36%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A + E+ +A ++ + +LS+ P L
Sbjct: 8 RFDLDTLKRLAQFAAQRSSEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFASFQM 67
Query: 62 VIDVVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + P + I + + Q A AKGL TI + + + + + N
Sbjct: 68 SLQIFLADHLMPAQLNSQIFNYLNQ-FASKAKGLTTIGMIFLFVTAVMTMMTVESAFNVI 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R R++ + ++ L+ +S + + + ++
Sbjct: 127 WRVRKARP-IAQRILVYWAIITLGPILIGVSLSISSYLFTQSMTFTAAQRMTPVIEWALA 185
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A + ++++LP + + + G + I++ + F +Y+ TY+
Sbjct: 186 G---AALPLTAAAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRIPTYT 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y A++ L+++Y+ + GA + +++
Sbjct: 243 AVYGAFAAVPLFLLWMYLCWFITLAGAMIASALPAIR 279
>gi|166710796|ref|ZP_02242003.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas oryzae
pv. oryzicola BLS256]
Length = 425
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 27 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFTNFVPG 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 87 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M F+
Sbjct: 140 -KVTRFLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAWRL-APMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMAAFRYQPE 286
>gi|188992885|ref|YP_001904895.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. campestris str. B100]
gi|226737462|sp|B0RUB3|Y3490_XANCB RecName: Full=UPF0761 membrane protein xcc-b100_3490
gi|167734645|emb|CAP52855.1| Ribonuclease BN,probable [Xanthomonas campestris pv. campestris]
Length = 425
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 27 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFVPG 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 87 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M F+
Sbjct: 140 -KVTRFLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAWRL-APMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHAVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMSAFRYQPE 286
>gi|255319771|ref|ZP_05360976.1| tRNA-processing ribonuclease BN [Acinetobacter radioresistens SK82]
gi|255303090|gb|EET82302.1| tRNA-processing ribonuclease BN [Acinetobacter radioresistens SK82]
Length = 434
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 107/280 (38%), Gaps = 8/280 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F I I F + +A ++ + L ++ P + + + A +
Sbjct: 28 LPFYDKTWFKFILFVIRRFEADRCRELAGSLTYTTLFAIVPMLTVFLVIISSIQALEPAR 87
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D++L + L I L + + + + NR
Sbjct: 88 QQLQQLIYSNFLPKSTIAF--DKMLNAFTEKSSNLTVIGVLFLFVTTIMMLSTIETAFNR 145
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E R + + + ++ ++ +FV + +L+ + F +
Sbjct: 146 IWRVKETRGGIVG-FMRYWTIISLGPIVLGSAFVISSALASLSILSNNFAGYEMDGAFLL 204
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ G ++ +P +++ +F+ I + + LF + F++Y
Sbjct: 205 S---LLSIALTIAGFFIIYWTIPNRNVPMIAAALAGVFSAIVFEMLKNLFGTIMSNFTSY 261
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+Y A+I L+++Y+ +LG E++ ++ ++ R
Sbjct: 262 EIVYGAFAAIPIFLLWIYLSWNIVLLGVEVSFAITAFHSR 301
>gi|16762407|ref|NP_458024.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29143895|ref|NP_807237.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62182487|ref|YP_218904.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|168232952|ref|ZP_02658010.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168237643|ref|ZP_02662701.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168244229|ref|ZP_02669161.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168263083|ref|ZP_02685056.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467359|ref|ZP_02701196.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168821635|ref|ZP_02833635.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194444515|ref|YP_002043245.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194450742|ref|YP_002048026.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194470662|ref|ZP_03076646.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194734561|ref|YP_002116947.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197249949|ref|YP_002148947.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|198245131|ref|YP_002217947.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200387726|ref|ZP_03214338.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204930339|ref|ZP_03221316.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205354393|ref|YP_002228194.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207859217|ref|YP_002245868.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213161529|ref|ZP_03347239.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213426072|ref|ZP_03358822.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213620640|ref|ZP_03373423.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
gi|213647342|ref|ZP_03377395.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|213852982|ref|ZP_03382514.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
gi|238912170|ref|ZP_04656007.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|289828504|ref|ZP_06546358.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|32699644|sp|Q8Z2T8|YIHY_SALTI RecName: Full=UPF0761 membrane protein yihY
gi|75479427|sp|Q57HI9|YIHY_SALCH RecName: Full=UPF0761 membrane protein yihY
gi|226737451|sp|B5EZZ9|YIHY_SALA4 RecName: Full=UPF0761 membrane protein yihY
gi|226737452|sp|B5FP16|YIHY_SALDC RecName: Full=UPF0761 membrane protein yihY
gi|226737453|sp|B5QWW1|YIHY_SALEP RecName: Full=UPF0761 membrane protein yihY
gi|226737454|sp|B5RFE6|YIHY_SALG2 RecName: Full=UPF0761 membrane protein yihY
gi|226737455|sp|B4TBV9|YIHY_SALHS RecName: Full=UPF0761 membrane protein yihY
gi|226737456|sp|B4SZW9|YIHY_SALNS RecName: Full=UPF0761 membrane protein yihY
gi|226737457|sp|B4TPN7|YIHY_SALSV RecName: Full=UPF0761 membrane protein yihY
gi|25512569|pir||AE0947 ribonuclease BN (EC 3.1.-.-) [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504711|emb|CAD09599.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi]
gi|29139531|gb|AAO71097.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62130120|gb|AAX67823.1| tRNA processing exoribonuclease BN [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|194403178|gb|ACF63400.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194409046|gb|ACF69265.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194457026|gb|EDX45865.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194710063|gb|ACF89284.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630178|gb|EDX48818.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197213652|gb|ACH51049.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197289415|gb|EDY28780.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197939647|gb|ACH76980.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199604824|gb|EDZ03369.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204320743|gb|EDZ05945.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205274174|emb|CAR39189.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205332809|gb|EDZ19573.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336891|gb|EDZ23655.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205341886|gb|EDZ28650.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205348123|gb|EDZ34754.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206711020|emb|CAR35389.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|320088432|emb|CBY98191.1| tRNA processing exoribonuclease BN [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322613091|gb|EFY10041.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619162|gb|EFY16045.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322626028|gb|EFY22840.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626513|gb|EFY23319.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632375|gb|EFY29123.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635144|gb|EFY31865.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642654|gb|EFY39244.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647943|gb|EFY44415.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650693|gb|EFY47094.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322652876|gb|EFY49213.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657191|gb|EFY53471.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662322|gb|EFY58537.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666857|gb|EFY63033.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672127|gb|EFY68242.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675849|gb|EFY71921.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681736|gb|EFY77762.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684070|gb|EFY80079.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|322716982|gb|EFZ08553.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323193342|gb|EFZ78557.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197699|gb|EFZ82832.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323200728|gb|EFZ85799.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323207268|gb|EFZ92220.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323211470|gb|EFZ96311.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218485|gb|EGA03193.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221033|gb|EGA05465.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226009|gb|EGA10228.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231689|gb|EGA15801.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236063|gb|EGA20141.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239516|gb|EGA23565.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243891|gb|EGA27902.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249253|gb|EGA33170.1| hypothetical protein SEEM9199_02097 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250504|gb|EGA34387.1| hypothetical protein SEEM8282_08567 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258958|gb|EGA42610.1| hypothetical protein SEEM8283_01652 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260203|gb|EGA43826.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265322|gb|EGA48819.1| hypothetical protein SEEM8285_17387 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270544|gb|EGA53990.1| hypothetical protein SEEM8287_12923 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326625738|gb|EGE32083.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 290
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 96/270 (35%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N +L +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRILPLLLSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ +P + L G + + G F YI F +Y +Y LA I
Sbjct: 191 ISFWLLYSIVPTTRVPNRDALVGAFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ ++ Y K+
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|107022529|ref|YP_620856.1| ribonuclease BN [Burkholderia cenocepacia AU 1054]
gi|105892718|gb|ABF75883.1| tRNA-processing RNAse BN [Burkholderia cenocepacia AU 1054]
Length = 442
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 103/273 (37%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
+ + A E+ +A ++ + LL++ P + L F ++
Sbjct: 8 LVTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFASRAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + R++++ ++ ++ V ++I L F G ++
Sbjct: 128 KPRPF-AQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAGPSTSMVEWLLAL 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A++ + ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 184 ASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|317403320|gb|EFV83834.1| membrane protein [Achromobacter xylosoxidans C54]
Length = 437
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 97/259 (37%), Gaps = 9/259 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF--GAWPE 72
+ EE +AS ++ + +L++ P + +L Q ++ P
Sbjct: 35 TAQRADEEKLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVALEDFLTNSLMPP 94
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
++ I D + Q A A L I S + + + N + V R
Sbjct: 95 SVSDNIMDYLNQ-FARQASRLTAIGGGFLLVTSLLLIMTIDKAFNDIWHVTRQRPLPQRA 153
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+ + + L V + + R+ + ++ ++ + ++ +G
Sbjct: 154 LVYWAVITLGPVVAGASLWATSFV------ARESLGLVRDVPEVVSVAISFIPLVLTGLG 207
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ + +P + L G T ++ V F +Y+ F TY+ +Y A++ L
Sbjct: 208 FAALFVVVPNRQVLWRDALIGGCVTAVALEVMKSAFAYYLTRFPTYTVIYGAFATLPIFL 267
Query: 253 VFLYMLGVFFILGAELNAS 271
+++Y+ + +LGA L AS
Sbjct: 268 LWIYLSWLAVLLGATLAAS 286
>gi|167551491|ref|ZP_02345246.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205323791|gb|EDZ11630.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 290
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 96/270 (35%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N +L +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRILPLLLSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ +P + L G + + G F YI F +Y +Y LA I
Sbjct: 191 ISFWLLYSIVPTTRVPNRDALIGAFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ ++ Y K+
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|167570181|ref|ZP_02363055.1| YihY family protein [Burkholderia oklahomensis C6786]
Length = 437
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 101/275 (36%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FAAKAKGLTTAGLIVLVVTAVMTMMTVESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A I+ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSISSYLFTKSLAFAGSTSTPPIFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP G + +++ + F +Y+ TY+ +
Sbjct: 182 TAASLPLTVLAFTLLYVYLPNCTVAWRDAAVGGVCAAVAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L+++Y+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWMYLSWFVTLAGAMIASALPAIR 276
>gi|163750691|ref|ZP_02157927.1| ribonuclease BN [Shewanella benthica KT99]
gi|161329535|gb|EDQ00527.1| ribonuclease BN [Shewanella benthica KT99]
Length = 314
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 107/270 (39%), Gaps = 16/270 (5%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIA 75
+ E+ A H++ LLS+ P + ++ + I+ ++ +
Sbjct: 6 QRLAEDQINIRAGHLAYVTLLSLVPMVTVTMSMLSAFPVFSDIRGQIESFIYDNFLPAAG 65
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS----WYIT 131
+ I + + +KG + A + + + SLN +R E RS + +
Sbjct: 66 DSVQVYINEFVDNASKG-TAVGIAALMVVAIMLISNIDKSLNSIWRTTEKRSIAVSFSMY 124
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ +L +LV S+V + A + F P L L + ++
Sbjct: 125 WMVLTLGPVLMGASLVATSYVVSLKVFSGADISGFVPLLVERLPLFFS----------VA 174
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ +++ +P K K L G + + + G F Y+ F +Y +Y LA I
Sbjct: 175 TFLLIYMVVPNTKVKFFHALLGAVAAALLFEFGKKGFAFYLTEFPSYEAIYGALAVIPIL 234
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKKP 281
V++Y+ + ++GAE+ A++ Y +K P
Sbjct: 235 FVWVYLSWIIVLIGAEITAALPEYLDKKLP 264
>gi|254245626|ref|ZP_04938947.1| Ribonuclease BN [Burkholderia cenocepacia PC184]
gi|124870402|gb|EAY62118.1| Ribonuclease BN [Burkholderia cenocepacia PC184]
Length = 453
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 103/273 (37%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
+ + A E+ +A ++ + LL++ P + L F ++
Sbjct: 19 LVTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQ 78
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 79 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 138
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + R++++ ++ ++ V ++I L F G ++
Sbjct: 139 KPRPF-AQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAGPSTSMVEWLLAL 194
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A++ + ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 195 ASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 254
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 255 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 287
>gi|116689478|ref|YP_835101.1| putative ribonuclease BN [Burkholderia cenocepacia HI2424]
gi|116647567|gb|ABK08208.1| tRNA-processing RNAse BN [Burkholderia cenocepacia HI2424]
Length = 442
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 103/273 (37%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
+ + A E+ +A ++ + LL++ P + L F ++
Sbjct: 8 LVTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + R++++ ++ ++ V ++I L F G ++
Sbjct: 128 KPRPF-AQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAGPSTSMVEWLLAL 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A++ + ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 184 ASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|333023117|ref|ZP_08451181.1| putative ribonuclease BN family membrane protein [Streptomyces sp.
Tu6071]
gi|332742969|gb|EGJ73410.1| putative ribonuclease BN family membrane protein [Streptomyces sp.
Tu6071]
Length = 298
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 101/274 (36%), Gaps = 3/274 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M Y + + +D A+ ++ A+L++ P ++ + LG
Sbjct: 1 MFRYAADWWPALRRTPLSLWNDDVTDDAAALTYYAMLALLPALLVTVVASALLG-PDTAR 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNR 118
T+I + P + D + ++L A L +A + + + + R SL+R
Sbjct: 60 TLIAYLTDYAPGQAGPQLHDLLTRMLTENATAWPLIATGVFSAFWSACSYLAVFRRSLHR 119
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+R + R+ L LV+ + + V + + + + L
Sbjct: 120 MHRTTDARTPVKRAHRIVLTALALLGLLVLTALLLVLSNPVVDAIGRALHLDEGVALAWR 179
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R A + + P + LPG + + W++ FT Y TY
Sbjct: 180 VLRWPALLCLVSGLAWVAFSNGPRIARRRRYSLPGGVLATVLWLLATAGFTLYTSLIGTY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
S +Y LA I+ L++L++ + + GA+ A +
Sbjct: 240 SALYGSLAGIVVFLIWLWLSNLALLAGAQFAAEL 273
>gi|85859314|ref|YP_461516.1| ribonuclease BN family membrane protein [Syntrophus aciditrophicus
SB]
gi|85722405|gb|ABC77348.1| membrane spanning protein ribonuclease BN-like family [Syntrophus
aciditrophicus SB]
Length = 454
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 103/268 (38%), Gaps = 2/268 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ +F + ++ +I F E+ AS ++ +L+S+ P +A G + +
Sbjct: 40 KSFFLTLLRVLILSIRGFDEDKCKLRASSLTFYSLVSIVPVAAMAFGIAKGFGFEKVLEA 99
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
+ A E I + +L G+ I + + + + + N +
Sbjct: 100 QLRS-KLAGHEEILANVIQFSHSLLENTRGGVIAGIGLIVLFWAVIKVLGQIEEAFNDIW 158
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E R+ +L+ V +++ S + V I L + + F LG L + +
Sbjct: 159 GVKERRTIGRMFSDYLSLMLICPVLIILSSSMTVFITTQLNLIMEKFTILGVLSPLFFLF 218
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L+ F+++F+P K + S L I + + + + + Y+
Sbjct: 219 LKLLPYGLLWSLFTFIYIFMPNTKVRFTSGLLAGIIAGTIFQIVQWGYITFQIGVVQYNA 278
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A + LV+L + + + GAEL
Sbjct: 279 IYGSFAVLPLFLVWLQLSWLIVLYGAEL 306
>gi|161505480|ref|YP_001572592.1| ribonuclease BN [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|189039570|sp|A9MIA4|YIHY_SALAR RecName: Full=UPF0761 membrane protein yihY
gi|160866827|gb|ABX23450.1| hypothetical protein SARI_03639 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 290
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 96/270 (35%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N +L +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRVLPLLLSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ +P + + G + + G F YI F +Y +Y LA I
Sbjct: 191 ISFWLLYSIVPTTRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ ++ Y K+
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|239926821|ref|ZP_04683774.1| ribonuclease BN [Streptomyces ghanaensis ATCC 14672]
gi|291435160|ref|ZP_06574550.1| ribonuclease BN [Streptomyces ghanaensis ATCC 14672]
gi|291338055|gb|EFE65011.1| ribonuclease BN [Streptomyces ghanaensis ATCC 14672]
Length = 321
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 83/274 (30%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ D+ F DG+ A ++ +L + PF V LA V +
Sbjct: 33 LRLLTDSFARFRYADGFTNARALAFQVVLGLVPFTVALVGLATSAHTESVGRVVELTLGR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + + A ++ + + NR Y +
Sbjct: 93 IVPGASADLVQDAFDGTRRSAHGDIAATLALWLGLGFALLNLASAMGQIERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + L A + L++ V VA V + G+ +
Sbjct: 153 RDRPFPRKYGRAVLLALTAGLPLMLGFVVLVAGDAVGDAVARVVGGPGSGTGWWGALDVP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ + + P + L G + WV L Y+ + +Y
Sbjct: 213 VGLALAWVASAVIFRWSPRRVQPGYTWLAFGSAVHLLLWVAATWLLALYVEGSGAFGALY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + V LG A +
Sbjct: 273 GPLTAFVALLLWANLTAVALFLGIAFAAQLEAAR 306
>gi|207724035|ref|YP_002254433.1| ribonuclease bn protein [Ralstonia solanacearum MolK2]
gi|206589243|emb|CAQ36205.1| ribonuclease bn protein [Ralstonia solanacearum MolK2]
Length = 436
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 114/274 (41%), Gaps = 13/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
+ ++ A+ E+ +A ++ + +LS+ P + L Q I+ +
Sbjct: 16 LRALLRYALRRAGEDSLPQVAGSLTFTTVLSLVPVLTVAFALFTAFPMFQSFRAAIESYL 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P I++PI + Q + AKGL + S + + +LN +RV +
Sbjct: 76 FSNLVPGNISRPILTYLNQ-FSHNAKGLTAAGLVGLVVTSVMTMLTIENALNAIWRVHQR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA--YVRKFFPALGNLLLIIWNGRIY 183
R R++ F ++ L+ S + ++++ YV K LG ++ ++
Sbjct: 135 RP-LTQRVLVFWALVSFGPVLIGASLSVSSYLVSISAGYVAKLPYGLGVVVGMV------ 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L I +++F+P + +++ + F +Y+ F TY+ +Y
Sbjct: 188 -PILLSAIAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYG 246
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++Y+ + +LGA + A++ I
Sbjct: 247 TFAALPIFLLWIYVSWLVTLLGATIAATLPIVRQ 280
>gi|222110332|ref|YP_002552596.1| ribonuclease bn [Acidovorax ebreus TPSY]
gi|221729776|gb|ACM32596.1| ribonuclease BN [Acidovorax ebreus TPSY]
Length = 429
Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 107/258 (41%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + LL++ PF+ + + V+ +V P+ I
Sbjct: 33 ERFREDRLGLTASSLTFTTLLALVPFVTVALAMFTVFPMFAEMQLVLQRWLVDSLVPDSI 92
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++P+ + Q A A GL + + + +LN +RV +R + + +
Sbjct: 93 SRPVLGYLTQ-FAAKAHGLGAAGLSILMVTALALILTIDRTLNNIWRVQRLRP--LGQRV 149
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L LV+ + + + +A A R L ++++ L G+
Sbjct: 150 LIYWAALTLGPLVLAASLALTTSVASAASRGIGDTLPGGARLLFDA---IEFFVLAAGMA 206
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F + + + + Y+ + TYS +Y A++ L++
Sbjct: 207 ALYRYVPNTQVHWRHAWAGGVFVAVGIELAKKVLSLYLASVPTYSVLYGTFATLPILLLW 266
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 267 VYVAWVIVLLGAVVAAYL 284
>gi|78046524|ref|YP_362699.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325929450|ref|ZP_08190578.1| tRNA-processing RNAse BN [Xanthomonas perforans 91-118]
gi|123730411|sp|Q3BX14|Y968_XANC5 RecName: Full=UPF0761 membrane protein XCV0968
gi|78034954|emb|CAJ22599.1| ribonuclease BN [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|325540225|gb|EGD11839.1| tRNA-processing RNAse BN [Xanthomonas perforans 91-118]
Length = 425
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 27 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFVPG 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 87 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M F+
Sbjct: 140 -KVTRFLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAWRL-APMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMSAFRYQPE 286
>gi|302523065|ref|ZP_07275407.1| ribonuclease BN family membrane protein [Streptomyces sp. SPB78]
gi|302431960|gb|EFL03776.1| ribonuclease BN family membrane protein [Streptomyces sp. SPB78]
Length = 305
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 106/275 (38%), Gaps = 5/275 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M Y + + +D A+ ++ A+L++ P ++ + LG
Sbjct: 8 MLRYAADWWPALRRTPLSLWNDDVTDDAAALTYYAMLALLPALLVTVVASALLG-PDTAR 66
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNR 118
T+I + P + D + ++L A L +A + + + + R SL+R
Sbjct: 67 TLIAYLTDYAPGQAGPQLHDLLTRMLTENATAWPLIATGVFSAFWSACSYLAVFRRSLHR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+R + R+ L LV+ + + V + + + L + + W
Sbjct: 127 MHRTTDARTPVKRAHRIVLTALALLGLLVLTALLLVLSNPVVDAIGRALH-LDEGVALAW 185
Query: 179 NGRIYATMLALFIGLIFVHL-FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +L L GL +V P + LPG + + W++ FT Y T
Sbjct: 186 RVLRWPALLCLVSGLAWVAFSNGPRIARRRRYSLPGGVLATVLWLLATAGFTLYTSLIGT 245
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
YS +Y LA + L++L++ + + GA+ A +
Sbjct: 246 YSALYGSLAGSVVFLIWLWLSNLALLTGAQFAAEL 280
>gi|325922977|ref|ZP_08184686.1| tRNA-processing RNAse BN [Xanthomonas gardneri ATCC 19865]
gi|325546536|gb|EGD17681.1| tRNA-processing RNAse BN [Xanthomonas gardneri ATCC 19865]
Length = 425
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 27 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFVPG 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 87 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M F+
Sbjct: 140 -KVTRFLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAWRL-APMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHGVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMAAFRYQPE 286
>gi|50086169|ref|YP_047679.1| putative ribonuclease (Rbn) [Acinetobacter sp. ADP1]
gi|81392297|sp|Q6F7V8|Y3168_ACIAD RecName: Full=UPF0761 membrane protein ACIAD3168
gi|49532145|emb|CAG69857.1| putative ribonuclease (Rbn) [Acinetobacter sp. ADP1]
Length = 419
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 102/281 (36%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F I + F + A ++ + L +V P + + + A +
Sbjct: 13 LPFYEKTWFQFILFVLRRFEADRCREHAGALTYTTLFAVVPMLTVFLVIISSIKALEPAR 72
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D +L + L I L + + + + NR
Sbjct: 73 QQLQQLIYSNFLPKSTIAF--DRVLNSFTEKSSNLTVIGILFLFVTTVMMLSTIETAFNR 130
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E RS I + + ++ ++ +FV + ++ + F L
Sbjct: 131 IWRVKETRSGIIG-FMRYWTIISLGPIILGSAFVISSTVASMNILSNNFAG---YELSGA 186
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ +G ++ +P + + + F+ + + +F + F++Y
Sbjct: 187 FILWLISFGLTILGFFILYWTIPNRTVPMYAAIIAACFSAAIFELLKNIFGFAMSNFTSY 246
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y A+I L+++++ +LG E++ ++ ++ K
Sbjct: 247 ELVYGAFAAIPIFLLWIFLSWNIVLLGVEVSYALTAFHSDK 287
>gi|116624854|ref|YP_827010.1| tRNA-processing RNAse BN [Candidatus Solibacter usitatus Ellin6076]
gi|116228016|gb|ABJ86725.1| tRNA-processing RNAse BN [Candidatus Solibacter usitatus Ellin6076]
Length = 367
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 58/284 (20%), Positives = 108/284 (38%), Gaps = 14/284 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVID 64
C V +++++ +H+ G + + ++ LLS+ P ++ ++AG G ++
Sbjct: 68 CDVKLLLWESFDHWTIHKGPRLGASLAFYTLLSLTPLVLVIVSIAGLVFGRPAAESQILW 127
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVV 123
V I + L T L F ++GV LR +LN + V
Sbjct: 128 EVEDTVGPAGRHAIQSLLEGAQHTTHGILATALGLLTLLFGASGVLLELRDALNTIWEVP 187
Query: 124 EM-----RSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+S RL SF V+ LV+ V + + PA +L
Sbjct: 188 AHAQNGLKSLLQLAKERLFSFALVIATGFLLVVSLIVNAWVAALGRFAAHVLPAPEGVLE 247
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + L + ++ +P + + + G T + + G +L Y+
Sbjct: 248 V---ANALVSFLVITALFAAIYRIMPDTRIEWRDVALGATVTSLLFTGGKLLIGLYLGK- 303
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+T+++ Y SI+ LV++Y G F LGAE + Y K
Sbjct: 304 ATFASTYGAAGSIVALLVWVYYSGQIFFLGAEFTKAFADQYGCK 347
>gi|307730419|ref|YP_003907643.1| ribonuclease BN [Burkholderia sp. CCGE1003]
gi|307584954|gb|ADN58352.1| ribonuclease BN [Burkholderia sp. CCGE1003]
Length = 436
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 99/277 (35%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A + E+ +A ++ + +L++ P L
Sbjct: 5 RFDLDTLKRLAQFAAKRSSEDRIPQVAGSLTFTTMLALVPLATVAFALFTAFPLFSSFQE 64
Query: 62 VIDVVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ P + I + Q A AKGL TI + + + + N
Sbjct: 65 SLQFFLADHLMPAQLNSQIFKYLNQ-FAAKAKGLTTIGMVLLFLTGVMTMMTIESAFNVI 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R R++ + ++ L+ +S + + F A + +I
Sbjct: 124 WRVRKARP-VAQRILVYWAIITLGPILIGVSLSISSYLFTQSMT---FSAAQRMTPVIEW 179
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + ++++LP + + + G + I++ + F +Y+ TY+
Sbjct: 180 ALAGTALPLTALAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRMPTYT 239
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y + + L+++Y+ + GA + +++
Sbjct: 240 AVYGAFSVVPLFLLWMYLCWFITLAGAMIASALPAIR 276
>gi|325849487|ref|ZP_08170768.1| YihY family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480107|gb|EGC83182.1| YihY family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 291
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 110/284 (38%), Gaps = 12/284 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + I + IE + D +AS +S L + P ++ NL
Sbjct: 1 MKIKSSNIKKFILNLIERIRDHDLMTLASSLSYYFLSAAIPMLLVLLNLVTKYMKGN--E 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRA 119
V+ P+ I I + +L + + I+ + A + +S GV + +++N A
Sbjct: 59 DVVIEFIKLLPDSIRGVILLIVKSILDSGSASTISTITLIFALWSASKGVSKIILAINVA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA------LGNL 173
Y + + S ++ F Y + L+ + + + L + L
Sbjct: 119 YGLEDDHSMIKNKIFGFLYTFILIFILIFIFLLKIYSNGILRIIEDVLKIVNYSFSLDEF 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLP---AAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+I + L +GL ++ P + K K G I T + + + ++
Sbjct: 179 TWLINLISGIIPPIILILGLTLLYKAAPYNNSIKIKFKDAFVGSISTSLMIFITSFGYSF 238
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++ S S +Y LA I+ LV++ + + ILGAE+ A+ +
Sbjct: 239 FLNNMSNMSVIYGALAGIIALLVWMLLFSLTIILGAEIIAAYMK 282
>gi|258650769|ref|YP_003199925.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
gi|258553994|gb|ACV76936.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
Length = 298
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 43/210 (20%), Positives = 85/210 (40%), Gaps = 5/210 (2%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
EV I + + +L + ++ + + + S+ + A S+ AY E R +
Sbjct: 84 EVADNLIGNTVDVILNSSQTDVVSVGLIISLWAGSSAMTAFVESIAIAYGQHEFRHPVLE 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIYATMLAL 189
R + G + A ++M + P Y+ + FP + II + L
Sbjct: 144 RFFALGLYVGALAAGIVMVPLLAIGP---DYLPRLFPPDWRSAVSEIIGWLYYPGLAIGL 200
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ P K + M LPG ++ + Y+ + Y LA+ +
Sbjct: 201 ILLLTTLYKVAPKDKHRWMRGLPGAFLAAAVFLTASTGLRLYLSYVYEHGLTYGALATPI 260
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T L+F Y + + I+GA+ N +++ YY +
Sbjct: 261 TFLLFYYFISMAIIIGAQFNNALLEYYPPR 290
>gi|289663480|ref|ZP_06485061.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. vasculorum NCPPB702]
Length = 425
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 27 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFVPG 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 87 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M F+
Sbjct: 140 -KVTRFLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAWRL-APMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMAAFRYQPE 286
>gi|29827601|ref|NP_822235.1| ribonuclease BN [Streptomyces avermitilis MA-4680]
gi|29604701|dbj|BAC68770.1| putative ribonuclease BN [Streptomyces avermitilis MA-4680]
Length = 319
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 86/274 (31%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ D+ F DG++ A + +L + PF + +A + V +
Sbjct: 33 LRLLVDSFARFRYADGFSHARALGFQVVLGMVPFTIALVGVATTVHTESVGQIVELTLAR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + L + A ++ + + NR Y V
Sbjct: 93 IVPGASADVVKDALAGTRRTAHASLWSTVALWVGLAFAVLNLASAMGQVERGANRIYGVE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R S L A V +V+ V VA V + F L +
Sbjct: 153 QDRPALHKYGRSVLLALAAGVPMVLGFLVLVAGRAVGESVVEAFGWSHGRLDWWGPLEVP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+I + + P + L G + WV L Y+ ++ +Y
Sbjct: 213 LGAALAWIASAVILRWSPRRVQPGYTWLAFGSAVHLVLWVGATWLLALYVAKSGSFGALY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + GV LG A +
Sbjct: 273 GPLTAFVALLLWANLTGVALFLGIAFAAQLEAAR 306
>gi|295835521|ref|ZP_06822454.1| membrane protein [Streptomyces sp. SPB74]
gi|197698571|gb|EDY45504.1| membrane protein [Streptomyces sp. SPB74]
Length = 299
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 105/267 (39%), Gaps = 5/267 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + +D A+ ++ A+L++ P ++ + LG H T+I +
Sbjct: 9 WPALRRTPLSLWNDDVTDDAAALTYYAMLALLPALLVTVVVFALLG-HDTARTLIAYLTD 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D + ++L A L +A + + + + R SL+R + + R
Sbjct: 68 YAPGQSGPQLHDLLTRMLTENATAWPLIATGTFSAFWSACSYLAVFRRSLHRMHCTTDAR 127
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L LV+ + + V + + + L + + W + +
Sbjct: 128 TPVKRAHRIVLTALALLGLLVLTALLLVLSNPVVDAIGRALH-LDEGVALAWRVLRWPML 186
Query: 187 LALFIGLIFVHL-FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L GL +V P + LPG + + W++ FT Y TYS +Y L
Sbjct: 187 LCLVSGLAWVAFSNGPRIAGRRRYSLPGGVLATVLWLLATAGFTLYTSLIGTYSALYGSL 246
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
A I+ L++L++ + + GA+ A +
Sbjct: 247 AGIVVFLIWLWLSNLALLAGAQFAAEL 273
>gi|218289811|ref|ZP_03494011.1| ribonuclease BN [Alicyclobacillus acidocaldarius LAA1]
gi|218240102|gb|EED07287.1| ribonuclease BN [Alicyclobacillus acidocaldarius LAA1]
Length = 285
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 116/270 (42%), Gaps = 3/270 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
MR + + D ++A+ I+ A+ S+ P ++ A + H+ +
Sbjct: 1 MRSRVQQAQAFARKLGANCMAHDITSLAAQIAFYAMFSLLPLLILVMYGASLVVPHRIIV 60
Query: 60 PTVIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V+ + +P+ A + + L L+ +S ++ A+ +++ + A++ +L+R
Sbjct: 61 EMVLGALRPYYPDLQNANQMLENSLNKLSDIGARAGLVSFISLAWSATSALIAVQQALDR 120
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ V RS+ R I+ +++ + V+ +F P + ++ +
Sbjct: 121 IFEVDVPRSFLARRAIAALFLVALVILAVVSAFAMALYPWVVHHIPAGTWFVTAFTRFSG 180
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R+ L+LF+ V+ +LP+ + + G + + + +LF Y TY
Sbjct: 181 VTRMLYP-LSLFVTCFVVYRYLPSRRVNPNCTILGALAATVLLDLARLLFVVYAAHAVTY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y GL ++ + ++Y+ + +LGAE+
Sbjct: 240 HAVYGGLTVVILLIFWMYIALIILLLGAEI 269
>gi|162454801|ref|YP_001617168.1| putative tRNA processing ribonuclease BN [Sorangium cellulosum 'So
ce 56']
gi|161165383|emb|CAN96688.1| putative tRNA processing ribonuclease BN [Sorangium cellulosum 'So
ce 56']
Length = 368
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 110/267 (41%), Gaps = 16/267 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ I +G AS ++ A LS+ P F + + ++ V+ + A
Sbjct: 30 KAVWSVIVSLDRHNGPRAASAMAFDAFLSLIPLAAFAGYVLSRV--QRWSDVVVRPILQA 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P +A +++E++++ + + IS + +S+G+ + Y E R WY
Sbjct: 88 APPDVATLVSEELIRL--SQSSAVAPISITGFLWITSSGISTAMGVFDTIYNTRE-RPWY 144
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R I+ V+ + + +++ V V I I+ ++ +
Sbjct: 145 VRRAIAAACVMASLAVVPVVAGVGVLIGTLSG---------STGARIVAFALPGGLVICM 195
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + P + I PG + T + W + LF+ Y+ T Y+T Y LA++
Sbjct: 196 VAAFFRISIQRPNIER--RRIFPGAVLTVVLWSAVSTLFSLYVATLGRYATFYGSLATVA 253
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L +L++L + ++G ELNA +
Sbjct: 254 IFLFWLWLLALALLIGGELNARLERER 280
>gi|298252235|ref|ZP_06976038.1| ribonuclease BN [Ktedonobacter racemifer DSM 44963]
gi|297546827|gb|EFH80695.1| ribonuclease BN [Ktedonobacter racemifer DSM 44963]
Length = 414
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 99/271 (36%), Gaps = 13/271 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFG 68
+ + F + +A ++ + L+S+ P + + GF LG +I+
Sbjct: 31 KTFREFLTKFNNDWSSGLAGLLAYNILMSIVPIAIALIAILGFALGGVTDTQQLINQATS 90
Query: 69 AWP-EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+P K + L A L I+ + A + SN + L+ Y V R
Sbjct: 91 FFPIAGSNKAALSLAITQLQKNAGWLTIIAVVLALFNGSNLFVTIENCLDIVYHVR-PRP 149
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--------FFPALGNLLLIIWN 179
RL++ G VL+ + IM F L L ++ F + ++ +
Sbjct: 150 MIRQRLVAIGMVLIFVFLIPIMVFASSLPTLILGLLQNNPALKSIPFVSTIAANPVLSYL 209
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++L FI +++ +P + G + I+ + LF Y F +
Sbjct: 210 AGFGGSILVGFILFEAIYVIVPNQHISWKNSWKGALGASIALALFLALFPIY-ARFGLGN 268
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ + L+F Y + ++G E+NA
Sbjct: 269 YT-GQVGFAIIFLIFFYYFAMILMIGGEINA 298
>gi|295835818|ref|ZP_06822751.1| integral membrane protein [Streptomyces sp. SPB74]
gi|295825721|gb|EFG64428.1| integral membrane protein [Streptomyces sp. SPB74]
Length = 315
Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 103/262 (39%), Gaps = 13/262 (4%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVIDVVFGAWPE 72
+E +A+ + +LLSV P ++ L G++ F +D +
Sbjct: 1 MEYRILGLAAEAAFFSLLSVPPLLLCLVGLLGYVDAWTGADTIAGFEQHFLDATRTVLSD 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I I + + + +I + A + S V ++ Y + +R TR
Sbjct: 61 QGVHDIARPIFEDVTRGRPDVISIGFVFALWSGSRAVNVFIDTITVMYGLDGVRGIVATR 120
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+SFG ++ + I + VA P V P G ++ I++ ++ +
Sbjct: 121 LLSFGLFIVGLLICSIALPLMVAGP---DTVVHVLPWSGTVVQILY---WPVVIVLGVVF 174
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L ++ +S + +PG WVV + Y+ + T+Y LA+ + L
Sbjct: 175 LTTLYHVSVPVRSPWIEDVPGSFVALAMWVVCSFALRIYLTSTIEGPTIYGSLAAPVAVL 234
Query: 253 VFLYMLGVFFILGAELNASMII 274
+++ + ++GA +NA++
Sbjct: 235 LWIGVSAFAVLVGAAMNAAIDR 256
>gi|254428414|ref|ZP_05042121.1| Ribonuclease BN-like family [Alcanivorax sp. DG881]
gi|196194583|gb|EDX89542.1| Ribonuclease BN-like family [Alcanivorax sp. DG881]
Length = 439
Score = 111 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 98/278 (35%), Gaps = 7/278 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F + + F E+ A+ ++ + L ++ P + + + A + T
Sbjct: 13 RFDSIKAFFALLVRQFNEDGCRQSAAALTYTTLFAIVPVMTVSFAVLSSVPALKDKGTQF 72
Query: 64 DV-VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
F + + D + A A L + + S + + +LNR ++V
Sbjct: 73 QTWAFEYFVPSAGNMLLDHLQS-FAKQAANLTGLGIVFLVVTSILMLSTVEQTLNRIWKV 131
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R + ++ + A ++L + + + F L +
Sbjct: 132 QTPR-----KGLTSLLMYWAVLSLGPICLGLGLAISSYLTSQAIFSDTVGYLGGVRLWLS 186
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L L ++ +P K + + G + + + FT +I +Y +Y
Sbjct: 187 LLPFLFTTAMLTLMYTVVPNTKIPLRQGVLGAAVAALLFELAKGGFTFFIKQAPSYEVVY 246
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A++ L+++Y+ + GAEL +++++ ++
Sbjct: 247 GAFAAVPVFLLWIYISWTIVLGGAELVRALVVFQEHRR 284
>gi|78066072|ref|YP_368841.1| ribonuclease BN [Burkholderia sp. 383]
gi|77966817|gb|ABB08197.1| tRNA-processing RNAse BN [Burkholderia sp. 383]
Length = 443
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 101/273 (36%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
+ + A E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + R++++ ++ ++ V ++I L F I+
Sbjct: 128 KPRPF-AQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAAPSTSIVEWLLAL 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 184 VSLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|124383383|ref|YP_001026405.1| ribonuclease BN [Burkholderia mallei NCTC 10229]
gi|126448742|ref|YP_001080322.1| tRNA-processing ribonuclease BN [Burkholderia mallei NCTC 10247]
gi|254358675|ref|ZP_04974948.1| tRNA-processing ribonuclease BN [Burkholderia mallei 2002721280]
gi|124291403|gb|ABN00672.1| ribonuclease BN [Burkholderia mallei NCTC 10229]
gi|126241612|gb|ABO04705.1| tRNA-processing ribonuclease BN [Burkholderia mallei NCTC 10247]
gi|148027802|gb|EDK85823.1| tRNA-processing ribonuclease BN [Burkholderia mallei 2002721280]
Length = 436
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 103/275 (37%), Gaps = 10/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FASKAKGLTTAGLIVLVFTAVM-MMTIESAFNLIWRV 125
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A ++ +
Sbjct: 126 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLL 180
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP + G + +++ + F +Y+ TY+ +
Sbjct: 181 AAASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAV 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++LY+ + GA + +++
Sbjct: 241 YGAFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 275
>gi|161617147|ref|YP_001591112.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|189039571|sp|A9MZA1|YIHY_SALPB RecName: Full=UPF0761 membrane protein yihY
gi|161366511|gb|ABX70279.1| hypothetical protein SPAB_04987 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 290
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 96/270 (35%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N +L +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRILPLLLSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ +P + L G + + G F YI F +Y +Y LA I
Sbjct: 191 ISFWLLYSIVPTTRVPNRDALVGAFVAALLFESGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ ++ Y K+
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|270296464|ref|ZP_06202664.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273868|gb|EFA19730.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 439
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 103/262 (39%), Gaps = 6/262 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ IY I F ++ AS ++ S LL++ P + +A G + + I F
Sbjct: 34 IIKTIYLCINRFTKDRIVNKASALTYSTLLAIVPILAILFAIARGFGFDNLMESQIVNGF 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G P + I + L+ G+F + + + N + + I+ NR ++V + R
Sbjct: 94 GG-PTETTEVILQFVNSYLSQTKSGIFIGVGLIMLLWTVLNLINNMEITFNRIWQVKKAR 152
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S Y F +LL + LV+ + + + + + F ++
Sbjct: 153 SMYRKITDYFSMLLLMPILLVVSGGLSIFMSTMVKNLEDFTLLAPVGKFMV----RLIPF 208
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + +++F+P K K+ L I + L+ + S Y+ +Y A
Sbjct: 209 VLTWFMFTALYVFMPNTKVKLKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYGSFA 268
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ L++L + + GAEL
Sbjct: 269 ALPMFLLWLQVSWTICLFGAEL 290
>gi|21241707|ref|NP_641289.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
axonopodis pv. citri str. 306]
gi|32699643|sp|Q8PNV2|Y937_XANAC RecName: Full=UPF0761 membrane protein XAC0937
gi|21107075|gb|AAM35825.1| ribonuclease BN [Xanthomonas axonopodis pv. citri str. 306]
Length = 422
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 24 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFVPG 83
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 84 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 136
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M F+
Sbjct: 137 -KVTRFLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAWRL-APMAVEFV 194
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 195 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 254
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 255 LLWIYLSWVSVLLGASLASSMSAFRYQPE 283
>gi|294626113|ref|ZP_06704720.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666019|ref|ZP_06731281.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599562|gb|EFF43692.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604211|gb|EFF47600.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 425
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 27 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFVPG 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 87 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M F+
Sbjct: 140 -KVTRFLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAWRL-APMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMSAFRYQPE 286
>gi|326629522|gb|EGE35865.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 290
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 95/270 (35%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N +L +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRILPLLLSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ +P + L G + G F YI F +Y +Y LA I
Sbjct: 191 ISFWLLYSIVPTTRVPNRDALVGAFVAALLXEAGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ ++ Y K+
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|317480349|ref|ZP_07939450.1| YihY family protein [Bacteroides sp. 4_1_36]
gi|316903524|gb|EFV25377.1| YihY family protein [Bacteroides sp. 4_1_36]
Length = 439
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 103/262 (39%), Gaps = 6/262 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ IY I F ++ AS ++ S LL++ P + +A G + + I F
Sbjct: 34 IIKTIYLCINRFTKDRIVNKASALTYSTLLAIVPILAILFAIARGFGFDNLMESQIVNGF 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G P + I + L+ G+F + + + N + + I+ NR ++V + R
Sbjct: 94 GG-PTETTEVILQFVNSYLSQTKSGIFIGVGLIMLLWTVLNLINNMEITFNRIWQVKKAR 152
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S Y F +LL + LV+ + + + + + F ++
Sbjct: 153 SMYRKITDYFSMLLLMPILLVVSGGLSIFMSTMVKNLEDFTLLAPVGKFMV----RLIPF 208
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + +++F+P K K+ L I + L+ + S Y+ +Y A
Sbjct: 209 VLTWFMFTALYVFMPNTKVKLKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYGSFA 268
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ L++L + + GAEL
Sbjct: 269 ALPMFLLWLQVSWTICLFGAEL 290
>gi|16767292|ref|NP_462907.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167991551|ref|ZP_02572650.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197261775|ref|ZP_03161849.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|32699646|sp|Q8ZKT5|YIHY_SALTY RecName: Full=UPF0761 membrane protein yihY
gi|16422590|gb|AAL22866.1| tRNA processing exoribonuclease BN [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|197240030|gb|EDY22650.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205330040|gb|EDZ16804.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261249143|emb|CBG27004.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267996313|gb|ACY91198.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160533|emb|CBW20063.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312915139|dbj|BAJ39113.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321225312|gb|EFX50370.1| Ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323132367|gb|ADX19797.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|332990855|gb|AEF09838.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 290
Score = 111 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 97/270 (35%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + + LA++ +L +I N +L +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGVSLAISSYLLSLRWASDLNTVIDNVLHILPLLLSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ +P + L G + + G F YI F +Y +Y LA I
Sbjct: 191 ISFWLLYSIVPTTRVPNRDALVGAFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ ++ Y K+
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|325282751|ref|YP_004255292.1| ribonuclease BN [Deinococcus proteolyticus MRP]
gi|324314560|gb|ADY25675.1| ribonuclease BN [Deinococcus proteolyticus MRP]
Length = 403
Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 107/275 (38%), Gaps = 9/275 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-LAGFLGAHQFVPTVIDVVFGA 69
++ +A F +++ +A+ ++ + ++ P ++ L L +++ +
Sbjct: 10 LVREAATSFGKDNAPRLAAALTYFTIFALVPLLILAITFLTSLLADPGVQQRIVEFLSSN 69
Query: 70 WPEVIAKPITDEILQV-----LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV- 123
+ + + I L+ I A+ ++N L+ SLN + V
Sbjct: 70 FGADVGNALQTMIDNQDDKVDLSRGITAGALIGLATLAWGATNLFVQLQASLNELWNVPP 129
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-PALGNLLLIIWNGRI 182
E + +L + G LL + ++ +F + ++ + + A G + G +
Sbjct: 130 EATGGFAGQLKTRGKGLLMVLGFGVVMLLFFGLNTYMSAIAQQLGEAWGAGAFLARLGTL 189
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L L ++ LP + + +L G T + + + V+ + Y F+ S +
Sbjct: 190 LLGSLLLTGVFAVIYRVLPNVRLQWRDVLVGAAITAVLFSILQVIISWYFANFAPGSA-F 248
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+SI+ L+++Y + GAEL + ++
Sbjct: 249 GAYSSIILLLLWIYYNSMILFFGAELTYAYAKHFG 283
>gi|170695903|ref|ZP_02887043.1| ribonuclease BN [Burkholderia graminis C4D1M]
gi|170139201|gb|EDT07389.1| ribonuclease BN [Burkholderia graminis C4D1M]
Length = 437
Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 101/277 (36%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A + E+ +A ++ + +L++ P L
Sbjct: 6 RFDLDTLKRLAQFAAKRSSEDRIAQVAGSLTFTTMLALVPLATVAFALFTAFPLFSSFQE 65
Query: 62 VIDVVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ P + I + Q A AKGL TI + + + + N
Sbjct: 66 SLQFFLADHLMPAQLNSQIFKYLNQ-FASKAKGLTTIGMVLLFLTGVMTMMTIESAFNVI 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R R++ + ++ L+ +S + + F A + +I
Sbjct: 125 WRVRKARP-IAQRILVYWAIITLGPILIGVSLSISSYLFTQSMT---FSAAQRMTPVIEF 180
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
A + + ++++LP + + + G + I++ + F +Y+ TY+
Sbjct: 181 ALAGAALPLTALAFTILYVYLPNCRVEWRDAVIGGLTAAIAFELAKRGFGYYVRRMPTYT 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y +++ L+++Y+ + GA + +++
Sbjct: 241 AVYGAFSAVPLFLLWMYLCWFITLAGAMIASALPAIR 277
>gi|126347933|emb|CAJ89653.1| putative ribonuclease BN [Streptomyces ambofaciens ATCC 23877]
Length = 321
Score = 111 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 85/274 (31%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ DA F DG+ A ++ +L + PF V LA + + +
Sbjct: 33 LRLLVDAFTRFRYADGFTNARALAFQVVLGLVPFTVVLVGLATSVHTESVGRVIELTLGR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISAL-----AAAYFSSNGVEALRISLNRAYRVV 123
P A + +++ AL A ++ + + NR Y +
Sbjct: 93 IVPGASADVVEKAFEGTRRSAGSDVWSTVALWLGLGFAVLNLASAMAQIERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + A + +V+ V VA V + +
Sbjct: 153 RDRPFLRKYGRALVLAFTAGLPMVLGFLVLVAGETVGDAVARTVGHEDGGAAWWGVLDVP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A +L ++ + + P + L G + W+ L Y+ + +Y
Sbjct: 213 AGLLLAWVASAVILRWSPRRDQPGYTWLAFGSAVHLVLWISATWLLALYVGRSGAFGAVY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + V LG A +
Sbjct: 273 GPLTAFIALLLWANLTAVALFLGIAFAAQLEAAR 306
>gi|325529541|gb|EGD06437.1| ribonuclease BN [Burkholderia sp. TJI49]
Length = 438
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 100/273 (36%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
+ + A E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTLKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + R++++ ++ L +S + + F I+
Sbjct: 128 KPRPF-AQRVLAYWALITLGPLLFGVSLSLSSYLFTQSLA---FTGAAPSTSIVEWLLTL 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A++ + ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 184 ASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWMYLSWFIALLGAMVTSALPAIR 276
>gi|163857354|ref|YP_001631652.1| ribonuclease [Bordetella petrii DSM 12804]
gi|288559234|sp|A9IT56|Y3042_BORPD RecName: Full=UPF0761 membrane protein Bpet3042
gi|163261082|emb|CAP43384.1| Ribonuclease [Bordetella petrii]
Length = 452
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/264 (16%), Positives = 95/264 (35%), Gaps = 9/264 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG- 68
+ A + EE +AS ++ + +L + P + +L Q ++
Sbjct: 30 RVFRFAAQRADEEKLLQVASSLTFTTVLGIVPMLAVVLSLFTAFPVFQDFRLALEDFLAN 89
Query: 69 -AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ I D + Q ++ L I S + + + N + V R
Sbjct: 90 SLMPPAVSDNIMDYLNQFAYQASR-LTAIGGAFLVVTSLLLIMTIDKTFNDIWHVTRQRP 148
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L+ + V L V + + R+ + ++ I+ + ++
Sbjct: 149 LPQRALVYWAVVTLGPVVAGASLWATSFL------ARESLGLVRDVPEIVSLAISFLPLI 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+G + + +P L G T I + F +Y+ F TY+ +Y A+
Sbjct: 203 LTGLGFAALFVVVPNRHVYWRDALVGGFGTAIVLELMKAAFAYYLTRFPTYTVIYGAFAT 262
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++Y+ + + GA + AS
Sbjct: 263 LPIFLLWIYLSWLAVLFGATVAAS 286
>gi|256375904|ref|YP_003099564.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
gi|255920207|gb|ACU35718.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
Length = 307
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/266 (13%), Positives = 88/266 (33%), Gaps = 2/266 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + + + E A+ ++ +L + + L GFLG V+ V+
Sbjct: 17 WTVFRTTVVWYREHHLSDRAAALTHYTVLVMLSGALLPVALVGFLGDD-TRSKVMTVISP 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + + A L + A + + A + V E RS
Sbjct: 76 LAPSRVHGILVVALDGLRPAVAGPLAAVCLFVAVWSAYRFAGAFLRACAACNGVKEHRSL 135
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G L V +++ V V + + + + +L
Sbjct: 136 WKLVPLRVGLTLGVLVLFILVVGVVAFTGDIADEVAALAGVRASTVQLWDVAKWPVLVLL 195
Query: 189 LFIGLIFVHLFLPAAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + PA + I PG + + +V Y +Y +Y +
Sbjct: 196 AGCAVRLLFAAPPATRRPGRLGITPGALLALVLCLVATFGVGVYAAYAGSYDRVYGSIIG 255
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
++ + ++++ ++G ++A++
Sbjct: 256 LVVIMAWIWLACTALLVGVAMDAALQ 281
>gi|134295525|ref|YP_001119260.1| putative ribonuclease BN [Burkholderia vietnamiensis G4]
gi|134138682|gb|ABO54425.1| tRNA-processing RNAse BN [Burkholderia vietnamiensis G4]
Length = 443
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 99/274 (36%), Gaps = 7/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTLKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNVQIFKYLNQ-FAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + L Y L ++ ++ F A + +I W +
Sbjct: 127 RKPRPFAQRVL---AYWALITLGPLLFGVSLSLSSYLFTQSLAFTGAAPSTSIIEWLLAL 183
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A++ + ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 184 -ASLPLTVLAFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 243 GAFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|121610705|ref|YP_998512.1| putative ribonuclease BN [Verminephrobacter eiseniae EF01-2]
gi|288559244|sp|A1WPD7|Y3782_VEREI RecName: Full=UPF0761 membrane protein Veis_3782
gi|121555345|gb|ABM59494.1| tRNA-processing RNAse BN [Verminephrobacter eiseniae EF01-2]
Length = 417
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 99/262 (37%), Gaps = 17/262 (6%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F + AS ++ + +L++ PF + + + +V P+ I
Sbjct: 35 ERFRADHLGLTASSLTFTTILALVPFFTVALAVFTAFPIFGQLQDALQGWLVSSLVPDSI 94
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q A A GL + + + +LN +RV +R LI
Sbjct: 95 ARQVLGYLTQ-FAAKASGLGLAGFSVLLVTALALILTIDRTLNDIWRVQRLRPLGQRVLI 153
Query: 135 SFGYV----LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + LL +L + S+V A + + L + L + L
Sbjct: 154 YWAAITLGPLLLGASLALTSYVMSASGGLVKRLPDGVRFLFDSLQ----------FMVLA 203
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
G+ ++ ++P + G +F + + Y+ TYS +Y A++
Sbjct: 204 AGMALLYHYVPNTPVRWRHAWSGGLFVALCIELAKKALALYLGRVPTYSVVYGAFATLPI 263
Query: 251 CLVFLYMLGVFFILGAELNASM 272
LV++YM V +LGA + A +
Sbjct: 264 LLVWIYMAWVIVLLGAVVTAYL 285
>gi|227502530|ref|ZP_03932579.1| tRNA-processing ribonuclease BN [Corynebacterium accolens ATCC
49725]
gi|227076692|gb|EEI14655.1| tRNA-processing ribonuclease BN [Corynebacterium accolens ATCC
49725]
Length = 389
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 110/281 (39%), Gaps = 18/281 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---QFVPTVIDVVF 67
++ F + A+ ++ L++ P ++ ++A + + + +
Sbjct: 60 VMRRVWADFFHDALMDRAAAMTYLTLMAFAPTVLAAYSIATLVFSSRRGEVEALTAQFID 119
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +A+ + ++ +G +S L + + +S V A + N Y VE
Sbjct: 120 TYVPRSMAEEAGTIVSSIIGSTREGTFALVVSVLISLFAASAYVRAFSRTANTVYGRVEG 179
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFV---------FVAIPLALAY-VRKFFPALGNLLL 175
R T + + ++ + V++ V P+AL + G + +
Sbjct: 180 RGTIRTWALMWAITVVLVIGAVVVLCANLLRDTVVDSVIEPVALRLGLHGTVDFFGGIFM 239
Query: 176 IIWNGRIYATMLALFIGLIFV-HLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+WN + + + + LI V + F P + S+ I G + ++ +V F+ YI
Sbjct: 240 PVWNWLRFPITVVVALALIAVWYHFAPNVRPSRFRWITLGSVVALVTNLVVWGAFSLYIK 299
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ ++Y ++M + +++ ILG +++A ++
Sbjct: 300 YLAG-VSIYGAFGTVMAVFMTVWLSNTMLILGIKIDAEVLR 339
>gi|88858617|ref|ZP_01133258.1| tRNA processing exoribonuclease BN [Pseudoalteromonas tunicata D2]
gi|88818843|gb|EAR28657.1| tRNA processing exoribonuclease BN [Pseudoalteromonas tunicata D2]
Length = 294
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPT 61
++ + + E+ A +++ LLS+ P + + F
Sbjct: 14 SILLKLYAWLQLYVRRCQEDAITVNAGYLAYVTLLSLVPLMAVAVAIFSAFPVFESFREG 73
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + +F + ++ I + I +K + TI + + + +LNR +R
Sbjct: 74 IENFIFTNFVPTSSEVIREHIGAFAGNASK-MTTIGVGFLVVVALFLIRNVDGTLNRIWR 132
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R+ I+ I + + L V L V I + + P L +L +
Sbjct: 133 IDKKRNPMISFAIYWMVLTLGPVLLGASLGVTSYILSLASIAEQGIPGLSGFILTL---- 188
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +P + + LPG +F I + + F Y+ F +Y +
Sbjct: 189 --IPYFISILTFTLLYTIVPNTEVPFRAALPGAVFAAILFELSKQGFARYVSEFPSYEVI 246
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y LA++ V++Y+ + +LGAE+
Sbjct: 247 YGALATVPILFVWVYLSWIVVLLGAEV 273
>gi|302877777|ref|YP_003846341.1| ribonuclease BN [Gallionella capsiferriformans ES-2]
gi|302580566|gb|ADL54577.1| ribonuclease BN [Gallionella capsiferriformans ES-2]
Length = 400
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 99/275 (36%), Gaps = 7/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVV 66
+F I F ++ +AS ++ + LLSV P I L F + +
Sbjct: 6 LFSFIRFVAARFRQDRCVQIASSLTFTTLLSVVPLITIALTLFSAFPVFGDFSTQIKTYL 65
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G A + ++ A A L + L + + + + N +RV R
Sbjct: 66 LGNLMPETAGRVITHYMEQFAESAGRLSALGVLFLTVTAMLMMLTIDHAFNIIWRVSRPR 125
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ RL+ + VL + LV S + + L+ N+ +
Sbjct: 126 TLLK-RLVIYWAVLTLAPVLVGASLSLTSWLVGLSMGYAK-----NIPFFGVGMLKALPV 179
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + +P + L G I + +F +YI F TY +Y A
Sbjct: 180 IFTTLAFAMLFRLVPNRYVPLSHALIGGIVASALFETMNRVFGYYISHFPTYKLVYGAFA 239
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S+ L+++Y + +LGA + AS+ + + P
Sbjct: 240 SVPIFLMWVYFSWLTILLGAVVAASLPHWRTTEAP 274
>gi|83748282|ref|ZP_00945307.1| Ribonuclease BN [Ralstonia solanacearum UW551]
gi|207742928|ref|YP_002259320.1| ribonuclease bn protein [Ralstonia solanacearum IPO1609]
gi|83725014|gb|EAP72167.1| Ribonuclease BN [Ralstonia solanacearum UW551]
gi|206594323|emb|CAQ61250.1| ribonuclease bn protein [Ralstonia solanacearum IPO1609]
Length = 441
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 108/272 (39%), Gaps = 9/272 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
+ ++ A+ E+ +A ++ + +LS+ P + L Q I+ +
Sbjct: 16 LRALLRYALRRAGEDSLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFQSFRAAIESYL 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P I++PI + Q + AKGL + S + + +LN +RV +
Sbjct: 76 FSNLVPGNISRPILTYLNQ-FSHNAKGLTAAGLVGLVVTSVMTMLTVENALNAIWRVHQR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R R++ F ++ L+ S + ++++ + L +
Sbjct: 135 RP-LTQRVLVFWALVSFGPVLIGASLSVSSYLVSIS-----AGYVAKLPYGLGVVVGVVP 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L I +++F+P + +++ + F +Y+ F TY+ +Y
Sbjct: 189 ILLSAIAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYGTF 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++Y+ + +LGA + A++ I
Sbjct: 249 AALPIFLLWIYVSWLVTLLGATIAATLPIVRQ 280
>gi|58583238|ref|YP_202254.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|84625074|ref|YP_452446.1| fused ribonuclease BN/uncharacterized domain-containing protein
[Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188575458|ref|YP_001912387.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|67460605|sp|Q5GWQ2|Y3615_XANOR RecName: Full=UPF0761 membrane protein XOO3615
gi|123521141|sp|Q2NZV5|Y3417_XANOM RecName: Full=UPF0761 membrane protein XOO3417
gi|226737463|sp|B2SQM8|Y4555_XANOP RecName: Full=UPF0761 membrane protein PXO_04555
gi|58427832|gb|AAW76869.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84369014|dbj|BAE70172.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188519910|gb|ACD57855.1| tRNA-processing ribonuclease BN [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 425
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 27 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFTNFVPG 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 87 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M FI
Sbjct: 140 -KVTRFLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAWRL-APMAVEFI 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGVYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMAAFRYQPE 286
>gi|218438917|ref|YP_002377246.1| ribonuclease BN [Cyanothece sp. PCC 7424]
gi|218171645|gb|ACK70378.1| ribonuclease BN [Cyanothece sp. PCC 7424]
Length = 299
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 110/285 (38%), Gaps = 12/285 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
F VF ++ + + ++ +A+ ++ + S+ P +V +AG +G +
Sbjct: 5 RFRTVFRLLKETFGEWQKDRAAQLAAALAYYTVFSLTPLLVITIAIAGSIVGETAARQEI 64
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
I + I + V KGL ++ ++ ++GV A L+ + N+ ++
Sbjct: 65 IGRLQFVLNNTGTDVIETILNNVSQPEIKGLASLISIIVLLIGASGVFAQLQDAFNQIWK 124
Query: 122 VVEMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
V + + RL+SF V V L++ + + F P L +
Sbjct: 125 VGDNQPQGGIKELVKKRLLSFVMVFFIGVLLLVSLILSAVLSALTNISYDFLPRLEDFWR 184
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I+ + + ++ ++P + G I + + +++G + Y+
Sbjct: 185 IVN---YLLSFTIIAFLFAVLYKYVPDVPVAWKDVRVGSILSTLLFIIGKEILGIYLGR- 240
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S++S+ Y S++ L ++Y + GAE Y K+
Sbjct: 241 SSFSSAYGAAGSLIVLLAWIYYSAQILLFGAEFTQVYAKRYGSKR 285
>gi|158520031|ref|YP_001527901.1| putative ribonuclease BN [Desulfococcus oleovorans Hxd3]
gi|158508857|gb|ABW65824.1| putative ribonuclease BN [Desulfococcus oleovorans Hxd3]
Length = 450
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 98/267 (36%), Gaps = 2/267 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
I A F+ + G AS ++ +LS+ P + +A G Q +
Sbjct: 37 RVLVRYARIFMIAGREFITDGGPLRASALTFYTVLSLVPVMALAFAVAKGFGLQQTLEKE 96
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYR 121
+ F VI + I + +L GL + + + + S N +
Sbjct: 97 VLAQFPGQEAVILQMI-EYARALLDQTKGGLLAGVGVAVLIWTVIKVLNNIEKSFNAIWA 155
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
RS +L+ + L++ V + + + LG II G
Sbjct: 156 NTTPRSMGKKFSDYLSIMLVGPLLLILSGSATVLVATQVTAITNKIFFLGWFAPIIMTGL 215
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L +++ F++ F+P + + S + G + ++ + + + V S Y+ +
Sbjct: 216 QLLPYLFVWLLFSFIYGFMPNTRVPVRSCIFGGVLAGTAFKLLQWAYLIFQVGVSRYNAI 275
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A++ L+++ + + + GAEL
Sbjct: 276 YGSFAALPLFLIWMQLSWLVTLFGAEL 302
>gi|209696335|ref|YP_002264266.1| ribonuclease BN [Aliivibrio salmonicida LFI1238]
gi|226736667|sp|B6EGQ7|Y2938_ALISL RecName: Full=UPF0761 membrane protein VSAL_I2938
gi|208010289|emb|CAQ80622.1| tRNA-processing ribonuclease BN [Aliivibrio salmonicida LFI1238]
Length = 310
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 110/274 (40%), Gaps = 12/274 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
+ I + + + + A +++ LLS+ P + ++
Sbjct: 6 KYSLRISWSYFLFLKQRIIHDRLTVSAGYMAYITLLSLVPLVTVLLSVLSQFPIFSGAGE 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS-NGVEALRISLNRA 119
TV + V + + + + + ++ G T + +S + A+ SLN
Sbjct: 66 TVQEFVIQNFVPAASDAVEGSLKEFIS--NTGKMTAVGSGFLFVASVMLISAIDRSLNYI 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + S +++L L++ + + A +YV ++ +
Sbjct: 124 WRVKKKRRPMYS--FSLYWMILTLGPLLVWASLA-----ATSYVTSLNIMDDEIVSSFYR 176
Query: 180 GRI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + ++ F + ++L +P K ++ L G + + V V F YI F +Y
Sbjct: 177 TLLGWLPIILSFSAFLGLYLLVPNKKIRVRHALVGAMSAGCLFEVSKVGFAQYITQFPSY 236
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y LA++ V++Y+ + ++GAE+ AS+
Sbjct: 237 EVIYGALAAVPILFVWIYLCWIIVLIGAEITASL 270
>gi|167562990|ref|ZP_02355906.1| YihY family protein [Burkholderia oklahomensis EO147]
Length = 428
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 101/275 (36%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A + E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P I + Q A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQ-FAAKAKGLTTAGLIVLVVTAVMTMMTVESAFNLIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ A +TL + F + + + A I+ +
Sbjct: 127 RKPRPF-AQRVLAYW----ALITLGPLLFGVSLSISSYLFTKSLAFAGSTSTPPIFEWLL 181
Query: 183 YATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L L + ++++LP G + +++ + F +Y+ TY+ +
Sbjct: 182 TAASLPLTVLAFTLLYVYLPNCTVAWRDAAVGGVCAAVAFELAKRGFGYYVRRIPTYTAV 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L+++Y+ + GA + +++
Sbjct: 242 YGAFATVPMFLLWMYLSWFVTLAGAMIASALPAIR 276
>gi|258510959|ref|YP_003184393.1| ribonuclease BN [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477685|gb|ACV58004.1| ribonuclease BN [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 285
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 117/270 (43%), Gaps = 3/270 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
MR F + + D ++A+ I+ A+ S+ P ++ A + H+ +
Sbjct: 1 MRSRFQQAQAFARKLGANCMVHDITSLAAQIAFYAMFSLLPLLILVMYGASLVVPHRIIV 60
Query: 60 PTVIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V+ + +P+ A + + L L+ +S ++ A+ +++ + A++ +L+R
Sbjct: 61 EMVLGALRPYYPDLQNANQMLENSLNKLSDIGARAGLVSFISLAWSATSALIAVQQALDR 120
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ V RS+ R I+ +++ + V+ + P + ++ +
Sbjct: 121 IFEVGVPRSFLARRAIAALFLVALVILAVVSALAMALYPWVVHHIPAGTWFVTAFTRFSG 180
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R+ L+LF+ V+ +LP+ + + + G + + + +LF Y TY
Sbjct: 181 VTRMLYP-LSLFVTCFVVYRYLPSRRVNLNCTILGALAATVLLDLARLLFVVYAAHAVTY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y GL ++ + ++Y+ + +LGAE+
Sbjct: 240 HAVYGGLTVVILLIFWMYIALIILLLGAEI 269
>gi|296122779|ref|YP_003630557.1| ribonuclease BN [Planctomyces limnophilus DSM 3776]
gi|296015119|gb|ADG68358.1| ribonuclease BN [Planctomyces limnophilus DSM 3776]
Length = 311
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 98/274 (35%), Gaps = 11/274 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
R F V + DA ++ + + ++ A+LS+ P V L + G
Sbjct: 6 RLSFRAVVHVFVDAGREWLAHKCPRLGASLAFYAILSLAPLAVISVGLLSMIVGGEVARG 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRA 119
V D + E A+ ++ + + T + + V L+ +LN
Sbjct: 66 EVTDQMREVVGEEAAQIVSSVVANTRKSTNGFIATTIGIITLVVGAMAVFVELQDALNTI 125
Query: 120 YRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V R+ + R +SF + + ++ + + + PA +LL
Sbjct: 126 WEVPPHRTTGWWRFIKDRFLSFFMIFGIGLLVLTSIVLSLIVTSLGKVATDIVPATQSLL 185
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + LF G+ +LP G + T I +++G + + Y+
Sbjct: 186 QFSDPSINFVVFVLLFAGV---FRWLPDVSLTWRDTALGAVVTAILFLLGKIAISFYLHQ 242
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ Y SI+ LV++Y + GAEL
Sbjct: 243 SGVGNA-YGAAGSIVVFLVWMYYSMQVLLFGAEL 275
>gi|53714041|ref|YP_100033.1| ribonuclease BN [Bacteroides fragilis YCH46]
gi|52216906|dbj|BAD49499.1| ribonuclease BN [Bacteroides fragilis YCH46]
Length = 439
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 102/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY + F ++ AS ++ S LL++ P + +A G + +
Sbjct: 28 KFSIYNIIKTIYLCVNRFNKDRIVNKASALTYSTLLAIVPILAILFAIARGFGVSTLMES 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG I + L+ G+F + + + N V + I+ NR +
Sbjct: 88 QFRDGFGGS-TEATDIILQFVDSYLSQTKNGIFIGVGLVMLLWTVLNLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V + RS Y F LL + +V+ + + + L + F L +I
Sbjct: 147 QVKKGRSMYRKITDYFSMFLLMPILIVVSGGLSIFVGTMLKSMADFVLLAPILKFLI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L I ++ L+ + S Y+
Sbjct: 204 -RLIPFVLTWLMFTGLYIFMPNTKVKFKHALISGILAGSAYQAFQFLYISSQLWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPMFLLWLQISWTICLFGAEL 290
>gi|149908553|ref|ZP_01897215.1| ribonuclease BN [Moritella sp. PE36]
gi|149808387|gb|EDM68324.1| ribonuclease BN [Moritella sp. PE36]
Length = 300
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 111/274 (40%), Gaps = 8/274 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPT 61
+ F + + ++ AS ++ + LLS+ P I ++ + +
Sbjct: 22 SFLLTCFAFLRYLGKRISDDRLTVNASSLAYTTLLSLVPLITVLFSVMSAFPIFETWQQS 81
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V ++ I + + +A + +I + A + + + +N +R
Sbjct: 82 VESFLYTNLVPHATGTIQEYLHDFVAN-TGKMTSIGSGALFIVALLLINTIDKHINHIWR 140
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
RS++++ + + +L + +S + L+L++V G + L+
Sbjct: 141 CKIERSFFLSFAV-YWLILTFGPLFIAISLGVSSYLLSLSFVTDMTDVTGTVSLL----- 194
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L +GL +++ +P + + G F+ + FT Y+V F +Y +
Sbjct: 195 KLVPALLGTLGLFVMYVVIPHRRVPLRYAFIGACFSAFLFESIKRAFTWYLVQFPSYEVI 254
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y LA+I LV++Y+ + +LGAE+ AS+ +
Sbjct: 255 YGALATIPILLVWIYLCWLIVLLGAEITASLTEF 288
>gi|299768710|ref|YP_003730736.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter sp. DR1]
gi|298698798|gb|ADI89363.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter sp. DR1]
Length = 415
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 104/282 (36%), Gaps = 8/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFVLYVFKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D+ L + L I L + + ++ NR
Sbjct: 69 QQLQHLIYSNFLPKSTIAF--DKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E RS + + + ++ ++ +FV + ++ + F I
Sbjct: 127 IWRVKETRSGIMG-FMRYWTIISLGPIILGSAFVISSTVASMNILSNNFAGYQLDGSFI- 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ L +G ++ +P + + + + + + LF+ + F++Y
Sbjct: 185 --LWLISFLLTIVGFFILYWTIPNRTVPVYAAGIAACLSAVLFEILKNLFSFVMSNFTSY 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 243 ELIYGAFAAVPIFLLWIFLSWNIILLGVEVSFALTAFHSGKE 284
>gi|153828362|ref|ZP_01981029.1| YihY family protein [Vibrio cholerae 623-39]
gi|148876192|gb|EDL74327.1| YihY family protein [Vibrio cholerae 623-39]
Length = 309
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 102/274 (37%), Gaps = 10/274 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + + + + A +++ LLS+ P + ++
Sbjct: 8 MKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
VI D V + + + +++ +A + + + + + +LN
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYI 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + L + + A A +Y+ L ++N
Sbjct: 127 WRVQQKR-------RAVFSFSMYWMILTLGPILVGASIAATSYITSLKILDNEALSGVYN 179
Query: 180 -GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 180 LFLRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 240 QLIYGALAAIPILFVWVYLCWLIVLVGAEVTAAL 273
>gi|33596535|ref|NP_884178.1| hypothetical protein BPP1917 [Bordetella parapertussis 12822]
gi|33566304|emb|CAE37217.1| putative membrane protein [Bordetella parapertussis]
Length = 437
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 99/269 (36%), Gaps = 9/269 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + ++ A + E+ +AS ++ + +L++ P + +L Q ++
Sbjct: 24 FTRMGRVVRFAGQRADEQKLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVALE 83
Query: 65 VVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
P ++ I D + Q A A L I S + + + N ++V
Sbjct: 84 DFLANSLMPPSVSDNIMDYLNQ-FARQATRLTAIGGAFLIVTSLLLIMTIDKTFNDIWQV 142
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R L+ + + L V + + R+ + ++ +
Sbjct: 143 TRQRPLPQRALVYWAVITLGPVVAGASLWATSFV------ARESLGLVRDVPEAVSVAIS 196
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ +G + + +P + L G T I + F +Y+ F Y+ +Y
Sbjct: 197 FIPLVLTGLGFAALFVVVPNRRVYWKDALVGGFGTAIVLELMKAGFAYYLTRFPAYTVIY 256
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
A++ L+++Y+ + + GA + AS
Sbjct: 257 GAFATLPIFLLWIYLSWLAVLFGATVAAS 285
>gi|289670867|ref|ZP_06491942.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 416
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P IV L+ F +++ + D +F +
Sbjct: 27 LWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFVPG 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV--EALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L G FT++ + A +S + ++ + N +RV R
Sbjct: 87 AARSVQNYLNRSLED--LGKFTVAGMVAL-VASLLITLHSIEQTFNSIWRVAAARP---- 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +TL M A + F L + R+ A M F+
Sbjct: 140 -KVTRFLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAWRL-APMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y+ V +LGA L +SM + ++ +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMAAFRYQPE 286
>gi|171318603|ref|ZP_02907751.1| ribonuclease BN [Burkholderia ambifaria MEX-5]
gi|171096201|gb|EDT41120.1| ribonuclease BN [Burkholderia ambifaria MEX-5]
Length = 310
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 13/277 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAW 70
+ +A + F AMA+ I+ + S+ P +V +AG+ G V +
Sbjct: 20 VLNAFKRFSSHRCSAMAASIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLI 79
Query: 71 PEVIAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR-- 126
+ A I + A G+ T+ + AA +S +L +L+ + E R
Sbjct: 80 GDDAAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALSVIWPSAENRWS 139
Query: 127 ---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
RLISFG VL + L++ + A+ ++ + + I +
Sbjct: 140 SMLGLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFIGTWLLGDSPYVAITNVLQFV 195
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L + FLP A+ + G I + I + G LF Y+ T ++ +
Sbjct: 196 VGIAVLAGAFAVLMKFLPDARVAWHDAVIGGIVSAILFSGGKKLFALYLARAGT-ASAFG 254
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S L++LY +LGAE A+ + R +
Sbjct: 255 AAGSFAVLLMWLYFSAAVLLLGAEFAAARGDAHGRAR 291
>gi|167587384|ref|ZP_02379772.1| Ribonuclease BN [Burkholderia ubonensis Bu]
Length = 442
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 103/273 (37%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + R++++ ++ ++ V ++I L F ++ +
Sbjct: 128 KPRPF-AQRVLAYWALITLG---PLLFGVSLSISSYLFTQSLAFTGAAPTTSVVEWLLTF 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A++ + ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 184 ASLPLTVLAFTLLYVYLPNCTVAWRDAVVGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LG + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGGMVTSALPAIR 276
>gi|194364494|ref|YP_002027104.1| ribonuclease BN/unknown domain fusion protein [Stenotrophomonas
maltophilia R551-3]
gi|226737460|sp|B4SKS3|Y716_STRM5 RecName: Full=UPF0761 membrane protein Smal_0716
gi|194347298|gb|ACF50421.1| ribonuclease BN [Stenotrophomonas maltophilia R551-3]
Length = 424
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 100/265 (37%), Gaps = 8/265 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P + + ++ + D VF +
Sbjct: 27 LWHRFLDDRLFQAAAALAYTTVFALVPLAIVVFGVLSAFPVFDRWSDQLSDYVFSNFVPN 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + Q + A L +A + ++ + N+ +RV R +TR
Sbjct: 87 AARAAEGYLRQ-FSASAGQLTAAGFIALVVSLLITLNSVEETFNQIWRVGSTRP-KLTRF 144
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL ++ ++ + A +L F+ +
Sbjct: 145 LVYWTVLTLG-----AMLAAASLAVSARVFAMPLFGTQEGRWLADLALRLAPILIEFVCI 199
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ +P K +PG I + + Y+ +F +Y +Y +A + L+
Sbjct: 200 TLMFRVVPHHTVKWRHAVPGAILAAVILELVKWGIGAYLGSFQSYQKLYGTVAFVPILLL 259
Query: 254 FLYMLGVFFILGAELNASMIIYYWR 278
++Y+ V +LGA L++SM + ++
Sbjct: 260 WIYLCWVAVLLGASLSSSMAAFRYQ 284
>gi|301020240|ref|ZP_07184360.1| YihY family protein [Escherichia coli MS 196-1]
gi|299881873|gb|EFI90084.1| YihY family protein [Escherichia coli MS 196-1]
Length = 290
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLHWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|190572909|ref|YP_001970754.1| ribonuclease BN/unknown domain fusion protein [Stenotrophomonas
maltophilia K279a]
gi|226737461|sp|B2FQ10|Y865_STRMK RecName: Full=UPF0761 membrane protein Smlt0865
gi|190010831|emb|CAQ44440.1| putative ribonuclease [Stenotrophomonas maltophilia K279a]
Length = 424
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 100/265 (37%), Gaps = 8/265 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P + + ++ + D VF +
Sbjct: 27 LWHRFLDDRLFQAAAALAYTTVFALVPLAIVVFGVLSAFPVFDRWSDQLSDYVFSNFVPN 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + Q + A L +A + ++ + N+ +RV R +TR
Sbjct: 87 AARAAEGYLRQ-FSASAGQLTAAGFIALVVSLLITLNSVEETFNQIWRVGSTRP-KLTRF 144
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL ++ ++ + A +L F+ +
Sbjct: 145 LVYWTVLTLG-----AMLAAASLAVSARVFAMPLFGTQEGRWLAELALRLAPILIEFVCI 199
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ +P K +PG I + + Y+ +F +Y +Y +A + L+
Sbjct: 200 TLMFRVVPHHTVKWRHAVPGAILAAVILELVKWGIGAYLGSFQSYQKLYGTVAFVPILLL 259
Query: 254 FLYMLGVFFILGAELNASMIIYYWR 278
++Y+ V +LGA L++SM + ++
Sbjct: 260 WIYLCWVAVLLGASLSSSMAAFRYQ 284
>gi|60682237|ref|YP_212381.1| putative tRNA processing ribonuclease [Bacteroides fragilis NCTC
9343]
gi|253564684|ref|ZP_04842140.1| ribonuclease [Bacteroides sp. 3_2_5]
gi|265766340|ref|ZP_06094381.1| ribonuclease BN [Bacteroides sp. 2_1_16]
gi|60493671|emb|CAH08460.1| putative tRNA processing ribonuclease [Bacteroides fragilis NCTC
9343]
gi|251946149|gb|EES86526.1| ribonuclease [Bacteroides sp. 3_2_5]
gi|263254008|gb|EEZ25473.1| ribonuclease BN [Bacteroides sp. 2_1_16]
gi|301163715|emb|CBW23269.1| putative tRNA processing ribonuclease [Bacteroides fragilis 638R]
Length = 439
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 102/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY + F ++ AS ++ S LL++ P + +A G + +
Sbjct: 28 KFSIYNIIKTIYLCVNRFNKDRIVNKASALTYSTLLAIVPILAIVFAIARGFGVSTLMES 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG I + L+ G+F + + + N V + I+ NR +
Sbjct: 88 QFRDGFGGS-TEATDIILQFVDSYLSQTKNGIFIGVGLVMLLWTVLNLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V + RS Y F LL + +V+ + + + L + F L +I
Sbjct: 147 QVKKGRSMYRKITDYFSMFLLMPILIVVSGGLSIFVGTMLKSMADFVLLAPILKFLI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L I ++ L+ + S Y+
Sbjct: 204 -RLIPFVLTWLMFTGLYIFMPNTKVKFKHALISGILAGSAYQAFQFLYISSQLWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPMFLLWLQISWTICLFGAEL 290
>gi|329901861|ref|ZP_08272948.1| Ribonuclease BN [Oxalobacteraceae bacterium IMCC9480]
gi|327548953|gb|EGF33570.1| Ribonuclease BN [Oxalobacteraceae bacterium IMCC9480]
Length = 430
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 97/256 (37%), Gaps = 9/256 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
V D+ A EE +A ++ +++L++ P + + ++
Sbjct: 10 VRDLFRFAARRLDEEHLPQVAGSLTFTSVLALVPLLTIALAIFTAFPLFNTFRASLEAYF 69
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P+ IA + + + Q A + GL I + + + NR + V
Sbjct: 70 VQNLMPKAIANTVLEYLTQ-FAAKSTGLSAIGGGVLIVTAVAMMSTIDRVFNRIWGVRVS 128
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + L+ + V L + + + + + A V P +G + I +
Sbjct: 129 RPFLQRVLVYWAIVTLGPLLIGVSISLTSYLFKATNGVVLAIPLIGAVAYTI------IS 182
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ +++ +P L G + +++ + +F Y+V F TY+ +Y +
Sbjct: 183 VALTTGAFALLYVSVPNRTVDWPDALWGGLLAGVAFEIAKRVFATYVVRFPTYTMVYGSV 242
Query: 246 ASIMTCLVFLYMLGVF 261
A++ L+++YM +
Sbjct: 243 AAVPIFLLWIYMFWMI 258
>gi|78062949|ref|YP_372857.1| ribonuclease BN [Burkholderia sp. 383]
gi|77970834|gb|ABB12213.1| Ribonuclease BN [Burkholderia sp. 383]
Length = 311
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/265 (22%), Positives = 104/265 (39%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFRRFSSDRCSAMAAGIAFFSAFSLAPMLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR----- 126
A I + A GL T+ + AA +S +L +L+ + E R
Sbjct: 83 AAASIQTIVQNAHRAGERGGLATLISFAALAIGASATFASLSAALSVIWPATENRWSSML 142
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RLISFG VL + L++ + A+ +V + +++ + + +
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFVGTWLLGNSPYVIVTNLVQFFVGI 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + FLP A+ G I + I + G LF Y+ T ++ +
Sbjct: 199 AVLAAAFASLMKFLPDARVAWRDAAIGGIVSAILFSGGKKLFALYLAHAGT-ASAFGAAG 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY+ + +LGAE A+
Sbjct: 258 SFAVLLMWLYVSAIVLLLGAEFAAA 282
>gi|262373473|ref|ZP_06066751.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter junii
SH205]
gi|262311226|gb|EEY92312.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter junii
SH205]
Length = 416
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 103/275 (37%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV-- 66
F I + F + A ++ + L +V P + + + A + + +
Sbjct: 18 FQFIVFVLRRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPARQQLQQLIY 77
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ D+ L + L I L + + ++ NR +RV E R
Sbjct: 78 SNFLPKSTIAF--DKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNRIWRVKETR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + + ++ ++ +FV + ++ + F +I +
Sbjct: 136 TGLVG-FMRYWTIISLGPIVLGSAFVLSSTVASMNVLSNNFAGYQLDGALI---LWLISF 191
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ +G ++ +P I S + F+ + + LF + F++Y +Y A
Sbjct: 192 ILTIVGFFILYWTIPNRTVPIFSAVIAACFSATVFEILKHLFGWIMSNFTSYEIVYGAFA 251
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ L+++Y+ +LG E++ ++ ++ K+
Sbjct: 252 AVPIFLLWIYLSWNIILLGVEVSYALTAFHSGKEK 286
>gi|153212589|ref|ZP_01948336.1| YihY family protein [Vibrio cholerae 1587]
gi|124116460|gb|EAY35280.1| YihY family protein [Vibrio cholerae 1587]
Length = 309
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 100/273 (36%), Gaps = 8/273 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + + + + A +++ LLS+ P + ++
Sbjct: 8 MKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
VI D V + + + +++ +A + + + + + +LN
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYI 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + +L LV S + +L + L
Sbjct: 127 WRVQQKRRAVFSFSM-YWMILTLGPILVGASIAATSYITSLKILDN-----ETLSGAYNL 180
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 181 FLRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSYQ 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 241 LIYGALAAIPILFVWVYLCWLIVLVGAEVTAAL 273
>gi|297203442|ref|ZP_06920839.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197716352|gb|EDY60386.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 321
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 98/271 (36%), Gaps = 4/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + +D A+ ++ A+L++FP ++ ++ G L P VID +
Sbjct: 51 WVALRRTPMTVWNDDVTDWAAALTYYAVLALFPLLLVILSILG-LTMPTAKPEVIDRMTQ 109
Query: 69 AWPEVIAKPITDEILQVLAVPAK--GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A P + + Q+ A P L A + + + R +L +R+ R
Sbjct: 110 AAPAESRALLRGTLRQMAAQPTAAWTLIFAGGAGALWSGCSYLSVFRRALYSMHRISADR 169
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ T L+ S L+ + + + + R
Sbjct: 170 PVWRTAPRIIATALVLSSLLLTSTLALLLTGGLARRLGQALGWGTGPQATWDTLRWPVVA 229
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ ++ ++ PA+ + + PG + ++ F Y +Y +Y LA
Sbjct: 230 VVAVALVLVLYRSGPASSRPVRRMAPGGTLAVALLLTVSLGFAVYTSM-VSYDRLYGSLA 288
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ LV+L++ + ++GA+ NA +
Sbjct: 289 GVVVFLVWLWLSNLSLLIGAQFNAELTKRAR 319
>gi|300770567|ref|ZP_07080446.1| ribonuclease II [Sphingobacterium spiritivorum ATCC 33861]
gi|300763043|gb|EFK59860.1| ribonuclease II [Sphingobacterium spiritivorum ATCC 33861]
Length = 320
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 104/265 (39%), Gaps = 6/265 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVV 66
F II + F+ ED ++ ++ + S+ P +V +LAG F G V +
Sbjct: 15 FFSIIKTSAMGFINEDCLKYSASLAYYTIFSIGPILVLIISLAGVFFGQDAIEGKVFTEM 74
Query: 67 FGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--V 123
G A+ I + I+ + L+ + +S + +++ ++ S+NR + V
Sbjct: 75 KGLVGPSAARQIQEVIMNLKLSGKSNLALVVSIITLLIGATSVFGDIQNSINRIWHVRAK 134
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ W L ++ V + LA+ + ++ + + + +
Sbjct: 135 PKKGWVKVLKDRLLSSSLVISLGFLLMVTLVVNGVILAFTDRLQRYFPDITVHLLDAINF 194
Query: 184 -ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ +FI + LP K + ++ G FT + +V+G + Y+ T T + Y
Sbjct: 195 SISFGVIFILFGIIFRALPDVKIEWRTVRSGAFFTAVLFVIGRFVIGLYLQTSGT-ESTY 253
Query: 243 AGLASIMTCLVFLYMLGVFFILGAE 267
SI+ L+++Y GA
Sbjct: 254 GAAGSIILVLLWVYYTAAILYFGAI 278
>gi|33592226|ref|NP_879870.1| hypothetical protein BP1088 [Bordetella pertussis Tohama I]
gi|33601088|ref|NP_888648.1| hypothetical protein BB2105 [Bordetella bronchiseptica RB50]
gi|33571871|emb|CAE41386.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|33575523|emb|CAE32601.1| putative membrane protein [Bordetella bronchiseptica RB50]
gi|332381643|gb|AEE66490.1| hypothetical protein BPTD_1080 [Bordetella pertussis CS]
Length = 437
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 99/269 (36%), Gaps = 9/269 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + ++ A + E+ +AS ++ + +L++ P + +L Q ++
Sbjct: 24 FTRMGRVVRFAGQRADEQKLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVALE 83
Query: 65 VVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
P ++ I D + Q A A L I S + + + N ++V
Sbjct: 84 DFLANSLMPPSVSDNIMDYLNQ-FARQATRLTAIGGAFLIVTSLLLIMTIDKTFNDIWQV 142
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R L+ + + L V + + R+ + ++ +
Sbjct: 143 TRQRPLPQRALVYWAVITLGPVVAGASLWATSFV------ARESLGLVRDVPEAVSVAIS 196
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ +G + + +P + L G T I + F +Y+ F Y+ +Y
Sbjct: 197 FIPLVLTGLGFAALFVVVPNRRVYWKDALVGGFGTAIVLELMKAGFAYYLTRFPAYTVIY 256
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
A++ L+++Y+ + + GA + AS
Sbjct: 257 GAFATLPIFLLWIYLSWLAVLFGATVAAS 285
>gi|254523442|ref|ZP_05135497.1| tRNA-processing ribonuclease BN [Stenotrophomonas sp. SKA14]
gi|219721033|gb|EED39558.1| tRNA-processing ribonuclease BN [Stenotrophomonas sp. SKA14]
Length = 414
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 100/265 (37%), Gaps = 8/265 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
F+++ + A+ ++ + + ++ P + + ++ + D VF +
Sbjct: 17 LWHRFLDDRLFQAAAALAYTTVFALVPLAIVVFGVLSAFPVFDRWSDQLSDYVFSNFVPN 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + Q + A L +A + ++ + N+ +RV R +TR
Sbjct: 77 AARAAEGYLRQ-FSASAGQLTAAGFIALVVSLLITLNSVEETFNQIWRVGSTRP-KLTRF 134
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL ++ ++ + A +L F+ +
Sbjct: 135 LVYWTVLTLG-----AMLAAASLAVSARVFAMPLFGTQEGRWLAELALRLAPILIEFVCI 189
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ +P K +PG I + + Y+ +F +Y +Y +A + L+
Sbjct: 190 TLMFRVVPHHTVKWRHAVPGAILAAVILELVKWGIGAYLGSFQSYQKLYGTVAFVPILLL 249
Query: 254 FLYMLGVFFILGAELNASMIIYYWR 278
++Y+ V +LGA L++SM + ++
Sbjct: 250 WIYLCWVAVLLGASLSSSMAAFRYQ 274
>gi|323698038|ref|ZP_08109950.1| ribonuclease BN [Desulfovibrio sp. ND132]
gi|323457970|gb|EGB13835.1| ribonuclease BN [Desulfovibrio desulfuricans ND132]
Length = 461
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 109/263 (41%), Gaps = 10/263 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF--VPTVIDVV 66
++Y F+++ A+ ++ + +LS+ PF+ +++ G + +I +
Sbjct: 37 CRLVYLIGFSFIKDQTIIRAAALTFTTILSIVPFLAVAFSISKGFGFQNTGKMRDLILHL 96
Query: 67 FGAWPEVIAKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
PE + D+I++ + + L + + + + V + + N + V +
Sbjct: 97 TTGQPE-----VADKIIEYIDRTNVQALGWVGVVTLLFTVLSLVGTIEKAFNVIWSVDKG 151
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + R+ F ++L + ++ F + + L + +
Sbjct: 152 RSAWR-RITDFFPIILFGPIFLFVASSFNFSLQNQEMISRVMS-LKAIGYLETAFLKTVP 209
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ F+P + ++ + + G + + W + L+ ++ + Y+ +Y
Sbjct: 210 YLLIIMAFSMMYAFIPNTRVRLRAAIIGGVVGGVLWQMAQWLYINWQIGAVKYNAIYGSF 269
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
A + LV++Y+ V +LGA++
Sbjct: 270 AQLPLLLVWIYLSWVIVLLGAQV 292
>gi|312882854|ref|ZP_07742586.1| ribonuclease BN [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369373|gb|EFP96893.1| ribonuclease BN [Vibrio caribbenthicus ATCC BAA-2122]
Length = 304
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 104/270 (38%), Gaps = 8/270 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
Y + ++ + A +++ LLS+ P + ++ Q I
Sbjct: 6 YVDQLLLCSRYVVKRIGYDRINVNAGYLAYITLLSIVPMLTVLLSVLSSFSVFQNTGDAI 65
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
D V + + + + ++ + + + + + +LN +RV
Sbjct: 66 QDFVITHFVPAAGDAVKSALYEFVSN-TGKMSAVGGGFLFAVALMLISNIDKNLNYIWRV 124
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R + + + +L LV MS V + +L + +L L++ W
Sbjct: 125 TEKRRAVFSFSM-YWMILTLGPILVGMSIVMSSYLTSLKLINNEALSLLYELILRW---- 179
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ F + ++L +P + K+ + G + + + + F YI F +Y +Y
Sbjct: 180 -LPFILSFAAFVGLYLLVPNKRVKLSHAVIGGVIAALLFEMSKKAFALYITQFPSYQLIY 238
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
LA+I +++Y+ + ++GAE+ A++
Sbjct: 239 GALAAIPILFIWVYLCWLIVLVGAEITAAL 268
>gi|318060033|ref|ZP_07978756.1| hypothetical protein SSA3_18965 [Streptomyces sp. SA3_actG]
Length = 298
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 100/274 (36%), Gaps = 3/274 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M Y + + +D A+ ++ A+L++ P ++ + LG
Sbjct: 1 MLRYAADWWPALRRTPLSLWNDDVTDDAAALTYYAMLALLPALLVTVVASALLG-PDTAR 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNR 118
T+I + P + D + ++L A L +A + + + + R SL+R
Sbjct: 60 TLIAYLTDYAPGQAGPQLHDLLTRMLTENATAWPLIATGVFSAFWSACSYLAVFRRSLHR 119
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+R + R+ L LV+ + + V + + + + L
Sbjct: 120 MHRTTDARTPVKRAHRIVLTALALLGLLVLTALLLVLSNPVVDAIGRALHLDEGVALAWR 179
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R A + + P + LPG + + W++ FT Y TY
Sbjct: 180 VLRWPALLCLVSGLAWVAFSNGPRIARRRRYSLPGGVLATVLWLLATAGFTLYTSLIGTY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
S +Y LA + L++L++ + + GA+ A +
Sbjct: 240 SALYGSLAGSVVFLIWLWLSNLALLAGAQFAAEL 273
>gi|255010345|ref|ZP_05282471.1| putative tRNA processing ribonuclease [Bacteroides fragilis 3_1_12]
gi|313148145|ref|ZP_07810338.1| ribonuclease BN [Bacteroides fragilis 3_1_12]
gi|313136912|gb|EFR54272.1| ribonuclease BN [Bacteroides fragilis 3_1_12]
Length = 439
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 102/268 (38%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY + F ++ AS ++ S LL++ P + +A G + +
Sbjct: 28 KFSIYNIIKTIYLCVNRFNKDRIVNKASALTYSTLLAIVPILAIVFAIARGFGVSTLMES 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
FG I + L+ G+F + + + N V + I+ NR +
Sbjct: 88 QFRDGFGGS-TEATDVILQFVDSYLSQTKNGIFIGVGLVMLLWTVLNLVSNIEITFNRIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V + RS Y F LL + +V+ + + + L + F L +I
Sbjct: 147 QVKKGRSMYRKITDYFSMFLLMPILIVVSGGLSIFVGTMLKSMADFVLLAPILKFLI--- 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ +++F+P K K L I ++ L+ + S Y+
Sbjct: 204 -RLIPFVLTWLMFTGLYIFMPNTKVKFKHALISGILAGSAYQAFQFLYISSQLWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + + GAEL
Sbjct: 263 IYGSFAALPMFLLWLQISWTICLFGAEL 290
>gi|15609844|ref|NP_217223.1| hypothetical protein Rv2707 [Mycobacterium tuberculosis H37Rv]
gi|15842245|ref|NP_337282.1| hypothetical protein MT2780 [Mycobacterium tuberculosis CDC1551]
gi|31793879|ref|NP_856372.1| hypothetical protein Mb2726 [Mycobacterium bovis AF2122/97]
gi|121638582|ref|YP_978806.1| putative transmembrane alanine and leucine rich protein
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148662548|ref|YP_001284071.1| putative alanine and leucine rich transmembrane protein
[Mycobacterium tuberculosis H37Ra]
gi|148823896|ref|YP_001288650.1| hypothetical protein TBFG_12721 [Mycobacterium tuberculosis F11]
gi|167970070|ref|ZP_02552347.1| conserved alanine and leucine rich transmembrane protein
[Mycobacterium tuberculosis H37Ra]
gi|215404672|ref|ZP_03416853.1| hypothetical protein Mtub0_13498 [Mycobacterium tuberculosis
02_1987]
gi|215412513|ref|ZP_03421247.1| hypothetical protein Mtub9_14225 [Mycobacterium tuberculosis
94_M4241A]
gi|215428135|ref|ZP_03426054.1| hypothetical protein MtubT9_17773 [Mycobacterium tuberculosis T92]
gi|215431646|ref|ZP_03429565.1| hypothetical protein MtubE_13438 [Mycobacterium tuberculosis
EAS054]
gi|215446960|ref|ZP_03433712.1| hypothetical protein MtubT_13872 [Mycobacterium tuberculosis T85]
gi|218754443|ref|ZP_03533239.1| hypothetical protein MtubG1_13884 [Mycobacterium tuberculosis GM
1503]
gi|219558716|ref|ZP_03537792.1| hypothetical protein MtubT1_15977 [Mycobacterium tuberculosis T17]
gi|224991074|ref|YP_002645763.1| putative transmembrane alanine and leucine rich protein
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253798211|ref|YP_003031212.1| hypothetical protein TBMG_01267 [Mycobacterium tuberculosis KZN
1435]
gi|254232812|ref|ZP_04926139.1| hypothetical protein TBCG_02645 [Mycobacterium tuberculosis C]
gi|254365365|ref|ZP_04981410.1| conserved transmembrane alanine and leucine rich protein
[Mycobacterium tuberculosis str. Haarlem]
gi|254551763|ref|ZP_05142210.1| hypothetical protein Mtube_15112 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260187724|ref|ZP_05765198.1| hypothetical protein MtubCP_17074 [Mycobacterium tuberculosis
CPHL_A]
gi|260206016|ref|ZP_05773507.1| hypothetical protein MtubK8_17140 [Mycobacterium tuberculosis K85]
gi|289448362|ref|ZP_06438106.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis CPHL_A]
gi|289553508|ref|ZP_06442718.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis KZN 605]
gi|289570883|ref|ZP_06451110.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis T17]
gi|289575405|ref|ZP_06455632.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289746509|ref|ZP_06505887.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289751360|ref|ZP_06510738.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis T92]
gi|289754809|ref|ZP_06514187.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289758835|ref|ZP_06518213.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289762878|ref|ZP_06522256.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294994202|ref|ZP_06799893.1| hypothetical protein Mtub2_06728 [Mycobacterium tuberculosis 210]
gi|297635315|ref|ZP_06953095.1| hypothetical protein MtubK4_14385 [Mycobacterium tuberculosis KZN
4207]
gi|297732311|ref|ZP_06961429.1| hypothetical protein MtubKR_14534 [Mycobacterium tuberculosis KZN
R506]
gi|298526177|ref|ZP_07013586.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306776986|ref|ZP_07415323.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu001]
gi|306780889|ref|ZP_07419226.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu002]
gi|306785514|ref|ZP_07423836.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu003]
gi|306790110|ref|ZP_07428432.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu004]
gi|306794194|ref|ZP_07432496.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu005]
gi|306798612|ref|ZP_07436914.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu006]
gi|306804471|ref|ZP_07441139.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu008]
gi|306807492|ref|ZP_07444160.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu007]
gi|306968766|ref|ZP_07481427.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu009]
gi|306973101|ref|ZP_07485762.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu010]
gi|307080810|ref|ZP_07489980.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu011]
gi|307085402|ref|ZP_07494515.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu012]
gi|313659644|ref|ZP_07816524.1| hypothetical protein MtubKV_14539 [Mycobacterium tuberculosis KZN
V2475]
gi|2181998|emb|CAB09467.1| PROBABLE CONSERVED TRANSMEMBRANE ALANINE AND LEUCINE RICH PROTEIN
[Mycobacterium tuberculosis H37Rv]
gi|13882536|gb|AAK47096.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|31619473|emb|CAD94911.1| PROBABLE CONSERVED TRANSMEMBRANE ALANINE AND LEUCINE RICH PROTEIN
[Mycobacterium bovis AF2122/97]
gi|121494230|emb|CAL72708.1| Probable conserved transmembrane alanine and leucine rich protein
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124601871|gb|EAY60881.1| hypothetical protein TBCG_02645 [Mycobacterium tuberculosis C]
gi|134150878|gb|EBA42923.1| conserved transmembrane alanine and leucine rich protein
[Mycobacterium tuberculosis str. Haarlem]
gi|148506700|gb|ABQ74509.1| putative conserved alanine and leucine rich transmembrane protein
[Mycobacterium tuberculosis H37Ra]
gi|148722423|gb|ABR07048.1| conserved alanine and leucine rich transmembrane protein
[Mycobacterium tuberculosis F11]
gi|224774189|dbj|BAH26995.1| putative transmembrane alanine and leucine rich protein
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253319714|gb|ACT24317.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis KZN 1435]
gi|289421320|gb|EFD18521.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis CPHL_A]
gi|289438140|gb|EFD20633.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis KZN 605]
gi|289539836|gb|EFD44414.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289544637|gb|EFD48285.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis T17]
gi|289687037|gb|EFD54525.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289691947|gb|EFD59376.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis T92]
gi|289695396|gb|EFD62825.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289710384|gb|EFD74400.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|289714399|gb|EFD78411.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298495971|gb|EFI31265.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308214643|gb|EFO74042.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu001]
gi|308326290|gb|EFP15141.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu002]
gi|308329818|gb|EFP18669.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu003]
gi|308333461|gb|EFP22312.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu004]
gi|308337456|gb|EFP26307.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu005]
gi|308341129|gb|EFP29980.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu006]
gi|308346086|gb|EFP34937.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu007]
gi|308348955|gb|EFP37806.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu008]
gi|308353653|gb|EFP42504.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu009]
gi|308357500|gb|EFP46351.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu010]
gi|308361454|gb|EFP50305.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu011]
gi|308365048|gb|EFP53899.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu012]
gi|323718701|gb|EGB27863.1| alanine and leucine rich membrane protein [Mycobacterium
tuberculosis CDC1551A]
gi|326904323|gb|EGE51256.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis W-148]
gi|328457984|gb|AEB03407.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis KZN 4207]
Length = 324
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 110/281 (39%), Gaps = 15/281 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + ++ I + ++ ++ ++ + + LS+ P ++ ++ F P
Sbjct: 7 KPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVA-PLFGPD 65
Query: 62 VIDVVFGAW---------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
+ + + P V+ + I I + + ++ L + + S+ + A
Sbjct: 66 TLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAF 125
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
++ A+ +R R + ++ V LV + V V P V + P +
Sbjct: 126 VDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGP---RKVSEHIP--ES 180
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L ++ G A +L L +G+I ++ ++ G + +++ + Y+
Sbjct: 181 LANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYL 240
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ Y LA+ + L+F + G +LGAELNA++
Sbjct: 241 AWITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQ 281
>gi|258406232|ref|YP_003198974.1| ribonuclease BN [Desulfohalobium retbaense DSM 5692]
gi|257798459|gb|ACV69396.1| ribonuclease BN [Desulfohalobium retbaense DSM 5692]
Length = 425
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 106/271 (39%), Gaps = 4/271 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
F ++ D + + FV + AS ++ + L++ PF+ +L+ G +
Sbjct: 12 NAFRMIRDWVLFVLRAFVRDQCLLRASALTYVSALALVPFLAVAFSLSKGFGFQNTL--Y 69
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I + + + I + + L +I + + + + N + V
Sbjct: 70 IRTLLERFAAGREQVIEHVLAYINNTDVATLGSIGVGVLFVSVFSMLATVEKTFNTIWGV 129
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R ++R + + +++++ + + L + V + +G +
Sbjct: 130 Q--RPRQLSRKFTDYLSVTLLCPVLVIASISITASLQSSAVAQKLLRVGFFNSVYGGLLS 187
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A ++ LIF++ +P + + + L G + W L HY + FS Y+ +Y
Sbjct: 188 LAPFFMAWLALIFIYTVMPNTRVRFLPALGGGLVAGFLWQATQKLLIHYQIGFSKYNAIY 247
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
A + LV++Y+ + + GAE++ ++
Sbjct: 248 GSFAQVPLLLVWMYLSWIIVLFGAEISFALQ 278
>gi|238063597|ref|ZP_04608306.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
gi|237885408|gb|EEP74236.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
Length = 357
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 90/271 (33%), Gaps = 3/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA F DG++ + +L L+V PF++ L LGA + V D V
Sbjct: 57 WRLLRDAFVRFRYGDGFSHSRAFALQLCLAVVPFMIALTGLITDLGADEGGRVVADTVLA 116
Query: 69 AWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + D ++ + + L + + + NR Y V R
Sbjct: 117 LTPGQSEQMVEDLLVDSERTEDAGELALALGLLTGIVALTTTMAQIERGANRIYGVERDR 176
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
L + LLA V + + V VR+ + + R ++
Sbjct: 177 PALWKYLRASVLALLAGVPALTGFLILVGGGAMGDSVRRNYTWGDAATVAWDVARWPLSL 236
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + P + + G W + ++L Y+ + Y L
Sbjct: 237 GLTVLAVALLFRHAPRRNQPGLSWLFFGAGIATALWWLASLLLAAYVRFSDGFGQTYGAL 296
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+M L++ + G+ G A +
Sbjct: 297 TGMMALLLWANLTGMALFGGLAFAAQLEAMR 327
>gi|260890637|ref|ZP_05901900.1| ribonuclease BN [Leptotrichia hofstadii F0254]
gi|260859682|gb|EEX74182.1| ribonuclease BN [Leptotrichia hofstadii F0254]
Length = 521
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 109/270 (40%), Gaps = 12/270 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + +IY ++ + + +A ++ +LL++FP + + G +
Sbjct: 20 KKKMSEIKRMIYLIYRNYRDGETQILAISLTYYSLLAIFPVVALVLGITKGFGLDKI--- 76
Query: 62 VIDVVFGAWP--EVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNR 118
I F WP + I D ++L + T + + Y + + L S N+
Sbjct: 77 FIQKFFELWPGNNSFLRVIVDVAQRLLLSTESSILTGVGIVILIYSAVKVLITLENSFNK 136
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+++ + RS + + L + V++S + +A+ + K F ++ +
Sbjct: 137 IWKINKKRSITRRVVDYIAIIFLGPIFFVLLSALN---SVAVEEIAKHFSENAVIMNLFI 193
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
AT + LF ++ +P KI + I T + +LF + + Y
Sbjct: 194 GLFGPATYIILF---SYLFYIIPNTNVKIKPAVYAGIVTTLLTFGWKLLFLLLQSSITRY 250
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +Y LA I L+++ + V +LGA++
Sbjct: 251 NIIYGSLALIPIFLIWVQYVWVTILLGAQI 280
>gi|134094435|ref|YP_001099510.1| putative ribonuclease BN transmembrane protein [Herminiimonas
arsenicoxydans]
gi|133738338|emb|CAL61383.1| Putative ribonuclease BN [Herminiimonas arsenicoxydans]
Length = 434
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 108/274 (39%), Gaps = 9/274 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
+ ++I A EE +A ++ +++L++ P + + ++
Sbjct: 30 LRNLIRFAARRLDEERLPQVAGSLTFTSVLALVPVLTIALAIFTTFPLFNTFRASLEAYF 89
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P+ IA I + Q + A L + A+A + + + N+ +RV
Sbjct: 90 VQNLMPQGIANTILGYLTQ-FSTKATRLSAVGAVALIVTAVMMMLMIDRVFNQIWRVKTK 148
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R LI + V L + + + + A + P G +L +
Sbjct: 149 RPIMQRILIYWAIVTLGPLLIGASMTLTSYLFTATNGAVRDIPFFGGVLYSS------IS 202
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + +++ +P + L G + I++ V LF ++V TY+ +Y +
Sbjct: 203 ILLTTVAFTSLYIVVPNRFVEWRDALCGGLLAAIAFEVVKRLFAIFVVKVPTYTVVYGAV 262
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A+ LV++Y+ + + GA + A++ I + +
Sbjct: 263 AAFPIFLVWIYLGWLITLGGAVVTAALPIVKYER 296
>gi|115358125|ref|YP_775263.1| putative ribonuclease BN [Burkholderia ambifaria AMMD]
gi|115283413|gb|ABI88929.1| putative ribonuclease BN [Burkholderia ambifaria AMMD]
Length = 310
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 101/266 (37%), Gaps = 13/266 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPE 72
+A + F AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 22 NAFKRFSSHRCSAMAASIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGD 81
Query: 73 VIAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR---- 126
A I + A G+ T+ + AA +S +L +L+ + E R
Sbjct: 82 DAAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALSVIWPNSENRWSSM 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + + ++ + + I ++
Sbjct: 142 LGLVRVRLISFGLVLGVAFLLIVSLVL----DTVITFIGTWLLGDSPYVAITNVLQLVVG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A + G I + I + G LF Y+ T ++ +
Sbjct: 198 VAVLAGAFAVLMKFLPDAHVAWHDAVIGGIVSAILFSGGKKLFALYLARAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY +LGAE A+
Sbjct: 257 GSFAVLLMWLYFSAAVLLLGAEFAAA 282
>gi|226953927|ref|ZP_03824391.1| ribonuclease (Rbn) [Acinetobacter sp. ATCC 27244]
gi|294651571|ref|ZP_06728879.1| ribonuclease [Acinetobacter haemolyticus ATCC 19194]
gi|226835329|gb|EEH67712.1| ribonuclease (Rbn) [Acinetobacter sp. ATCC 27244]
gi|292822540|gb|EFF81435.1| ribonuclease [Acinetobacter haemolyticus ATCC 19194]
Length = 416
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 102/274 (37%), Gaps = 8/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV-- 66
F I + F + A ++ + L +V P + + + A + + +
Sbjct: 18 FQFIVFVLRRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPARQQLQQLIY 77
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ D+ L + L I L + + ++ NR +RV E R
Sbjct: 78 SNFLPKSTIAF--DKALSAFTDKSSNLTIIGILFLFVTTVLMLSSIENVFNRIWRVKETR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + + ++ L+ +FV + ++ + F L +
Sbjct: 136 TGLVG-FMRYWTIISLGPILLGSAFVLSSTVASMNILSNNFAG---YQLNGAFLLWLISF 191
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L IG ++ +P I S + F+ + V LF + F++Y +Y A
Sbjct: 192 LLTIIGFFILYWTIPNRNVPIYSAMIAACFSATVFEVLKRLFGWIMSNFTSYEIVYGAFA 251
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ L+++++ +LG E++ ++ ++ K+
Sbjct: 252 AVPIFLLWIFLSWNIILLGVEISYALTAFHSGKE 285
>gi|312887237|ref|ZP_07746841.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
gi|311300549|gb|EFQ77614.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
Length = 320
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/291 (20%), Positives = 122/291 (41%), Gaps = 15/291 (5%)
Query: 1 MREYFCIV-----FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLG 54
M++YF I F I+ A F+++ ++ ++ + S+ P ++ +LA FLG
Sbjct: 2 MKKYFSIKALKNGFTILKAAFNSFMDDKALKYSASLAYYTIFSLAPLLLLLISLAAVFLG 61
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALR 113
V + G AK I D I + L+ + + + +++ ++
Sbjct: 62 KDAIQGKVFSEINGIVGNDAAKQIQDMIKHLELSGESTLSVVVGVVTLIIGATSVFGEIQ 121
Query: 114 ISLNRAYRVVEM--RSWYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
++N ++V + W RL+S ++ L++ V A+ ++ F P
Sbjct: 122 DTINIIWQVKAKPEKGWLKLIKDRLLSSSLIITLGFLLLVSLVVNGALLALSDRLKNFLP 181
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
+ +LL + N I + + + + + LP AK ++ G IFT I +++G ++
Sbjct: 182 DITVILLSVIN--IVISFIVIAVLFGIIFKMLPDAKIAWKDVVSGAIFTAILFMIGRLVI 239
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YI T S+ Y S++ L+++Y GAE + + K
Sbjct: 240 GIYIDQSGT-SSTYGAAGSLIVILLWIYYTAAILYFGAEFTRAYADFNGIK 289
>gi|300703861|ref|YP_003745463.1| tRNA-processing ribonuclease bn [Ralstonia solanacearum CFBP2957]
gi|299071524|emb|CBJ42848.1| tRNA-processing ribonuclease BN [Ralstonia solanacearum CFBP2957]
Length = 436
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 108/272 (39%), Gaps = 9/272 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
+ ++ A+ E+ +A ++ + +LS+ P + L Q I+ +
Sbjct: 16 LRALLRYALRRAGEDSLPQVAGSLTFTTVLSLVPVLTVAFALFTAFPMFQSFRAAIESYL 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P I++PI + Q + AKGL + S + + +LN +RV +
Sbjct: 76 FSNLVPGNISRPILTYLNQ-FSHNAKGLTAAGLVGLVVTSVMTMLTVENALNAIWRVHQR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R R++ F ++ L+ S + ++++ + L +
Sbjct: 135 RP-LTQRVLVFWALVSFGPVLIGASLSVSSYLVSIS-----AGYVAKLPYGLGVVVGVVP 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L I +++F+P + +++ + F +Y+ F TY+ +Y
Sbjct: 189 ILLSAIAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYGTF 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++Y+ + +LGA + A++ I
Sbjct: 249 AALPIFLLWIYVSWLVTLLGATIAATLPIVRQ 280
>gi|288559248|sp|Q31UA7|YIHY_SHIBS RecName: Full=UPF0761 membrane protein yihY
Length = 290
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 100/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y+ K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYHKLKQ 280
>gi|254492253|ref|ZP_05105427.1| Ribonuclease BN-like family [Methylophaga thiooxidans DMS010]
gi|224462578|gb|EEF78853.1| Ribonuclease BN-like family [Methylophaga thiooxydans DMS010]
Length = 449
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 102/260 (39%), Gaps = 2/260 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++Y + A + + LLS+ P I ++ G H + ++ +
Sbjct: 43 LRVVYIMGRELATGELNLRAMSLVFTTLLSLVPLIAVAFSVLKAFGVHNQMEPLLLGLLE 102
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
E + ++ I V V L ++ Y V+ + + N +RV RS
Sbjct: 103 PLGERGPEITSNIIGFVQNVKVGVLGSVGLGMLFYTIIALVQKIENAFNFVWRVKRSRS- 161
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R + ++ +++ S + VA + V K + ++ G +
Sbjct: 162 -MARRFADYLSVVMIGPVLVFSALGVAATVVNHDVVKQLSEIEPFGTLLLVGTKLLPYVM 220
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + F++ F+P K K+ L G I W+ +F ++ + S Y+ +Y+ A +
Sbjct: 221 IILAFTFLYKFIPNTKVKLSPALIGATVAGILWISIGTIFASFVASSSNYTAIYSSFAIL 280
Query: 249 MTCLVFLYMLGVFFILGAEL 268
+++LY+ + G+++
Sbjct: 281 FFFMIWLYLAWFILLTGSQV 300
>gi|257126602|ref|YP_003164716.1| ribonuclease BN [Leptotrichia buccalis C-1013-b]
gi|257050541|gb|ACV39725.1| ribonuclease BN [Leptotrichia buccalis C-1013-b]
Length = 523
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 112/271 (41%), Gaps = 12/271 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + IIY ++ + + +A ++ +LL++FP + + G +
Sbjct: 9 IKKRIDEMKRIIYLIYRNYRDGETQILAISLTYYSLLAIFPVVALILGITKGFGLDKL-- 66
Query: 61 TVIDVVFGAWPEV--IAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLN 117
I F WP I K I D ++L + + L ++ + Y + + L S N
Sbjct: 67 -FIQKFFELWPGNNGILKVIIDVAQRLLLSTESSILTSVGIIILIYSAVKVLIMLENSFN 125
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ +++ + RS + + L + V++S + V + FP L+ ++
Sbjct: 126 KIWKINKKRSMTRRVIDYVAIIFLGPIFFVLLSTLNSF---VADEVIRNFPNNPILINLV 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
AT + LF ++ +P KI + + T + +LF + +
Sbjct: 183 VGLLGPATYIILF---SYLFYIIPNTNVKIKPAVFAGVVTTVLTFGWKLLFLLLQSSITK 239
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ +Y LA I L+++ + V +LGA++
Sbjct: 240 YNIIYGSLALIPIFLIWVQYVWVTILLGAQI 270
>gi|92114018|ref|YP_573946.1| ribonuclease BN, putative [Chromohalobacter salexigens DSM 3043]
gi|122419877|sp|Q1QWB1|Y1895_CHRSD RecName: Full=UPF0761 membrane protein Csal_1895
gi|91797108|gb|ABE59247.1| tRNA-processing RNAse BN [Chromohalobacter salexigens DSM 3043]
Length = 410
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 104/277 (37%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + I+ + + I+ F DG AS ++ + L +V PF+ + + + Q +
Sbjct: 9 RRWLTIILRSLRELIQRFDAHDGLKTASALTYTTLFAVVPFMTVLYAMLSAIPSFQGISE 68
Query: 62 VID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ ++F + + + + + A+ L I + + + + + N +
Sbjct: 69 QLQALIFSQFVPATGSALVEHLRD-FSRQARSLTLIGLMFLLVTAVMMMVTVERAFNNIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R R +S + A +TL + + + +L
Sbjct: 128 HVSRSR-----RGVSSFLLYWAVLTLGPLLLGSGFLLSSYLASLTLVRGAAEVLGGPVAF 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ F +F+++ +P + + + G ++ + F+ Y+ F +Y
Sbjct: 183 LRLLPLTLSFTAFVFIYMAVPNCRVRFRHAVAGAGLAALALELAKGAFSLYVTYFPSYQV 242
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+Y A++ LV++++ ++GAEL A +
Sbjct: 243 IYGTFAAVPLFLVWVFLSWAIVLVGAELAAWLGERRR 279
>gi|262380305|ref|ZP_06073459.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|262297751|gb|EEY85666.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 414
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 105/272 (38%), Gaps = 8/272 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV-- 66
F I I F + +A ++ + L ++ P + + + A + + +
Sbjct: 16 FKFILFVIRRFEADRCRELAGSLTYTTLFAIVPMLTVFLVIISSIQALEPARQQLQQLIY 75
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ D++L + L I L + + + + NR +RV E R
Sbjct: 76 SNFLPKSTIAF--DKMLNAFTEKSSNLTVIGVLFLFVTTIMMLSTIETAFNRIWRVKETR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + ++ ++ +FV + +L+ + F + + ++
Sbjct: 134 GGIVG-FMRYWTIISLGPIVLGSAFVISSALASLSILSNNFAGYEMDGAFLLS---LLSI 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
G ++ +P +++ +F+ I + + LF + F++Y +Y A
Sbjct: 190 ALTIAGFFIIYWTIPNRNVPMIAAALAGVFSAIVFEMLKNLFGTIMSNFTSYEIVYGAFA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+I L+++Y+ +LG E++ ++ ++ R
Sbjct: 250 AIPIFLLWIYLSWNIVLLGVEVSFAITAFHSR 281
>gi|261879980|ref|ZP_06006407.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333342|gb|EFA44128.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 442
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 104/258 (40%), Gaps = 5/258 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+Y + E+ W A+ ++ + ++++ P + G ++ + VF + P
Sbjct: 39 LYMVFKGLFVENHWGYAAQLTFNTMMAIVPVFAIIFAVGRGFGFEDYIAEWVHRVFASQP 98
Query: 72 EVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
V+ K + + + G+ +S + Y + + N + V + R W
Sbjct: 99 -VVGKAVLELASSYINYTHTGVVIGVSLVFMLYSVISLFNNVEGVFNGIWAVTKERDWGR 157
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ L + ++++S + V L + F L + I + + T+L LF
Sbjct: 158 AAFDYISVIFLVPLAIILLSGLSVFFNSILGRLPD-FQVLTPVFKGIISFAVPLTVLTLF 216
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ F+P K ++ + + + + + +Y V F++YS +Y LA++
Sbjct: 217 --FTLLYTFVPNTKVRVSMVWFPAMLAGLCIIGLQTAYVYYQVMFTSYSIIYGSLAALPL 274
Query: 251 CLVFLYMLGVFFILGAEL 268
++++ + I AEL
Sbjct: 275 LMLWMQLSWFICIGFAEL 292
>gi|296161436|ref|ZP_06844242.1| ribonuclease BN [Burkholderia sp. Ch1-1]
gi|295888251|gb|EFG68063.1| ribonuclease BN [Burkholderia sp. Ch1-1]
Length = 305
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/280 (19%), Positives = 103/280 (36%), Gaps = 13/280 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R +F I +A+ F + +A+ IS A S+ P ++ + G F G
Sbjct: 12 RRRGGSIFHIAVEAVGRFASDRCTTLAASISFYAAFSLAPTLLIVLTVTGWFFGEAAARG 71
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRA 119
+ V A + + GL + S + +S +L +L+
Sbjct: 72 KLFAQVHDILGNDAAGAMQAVVESAHRASGGGLAALLSIMLLVIGASATFSSLNTALDVV 131
Query: 120 YRVVEMRSW------YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ RL+SFG VL LV+ + A+ +V + L
Sbjct: 132 FAAKPKAGLAGLALLVRARLVSFGLVLGVGFLLVVSLVL----DTAITFVGQRLFGESPL 187
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ + ++ L + +LP + G I + + + VG LF Y+
Sbjct: 188 VMAAQIAQTVFGIVVLSAAFAAMLRWLPDTHVPFRHAMTGAIVSAVLFSVGRRLFGLYLA 247
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
T ++ + S+ +++LY F+LGAE+ ++M
Sbjct: 248 HAGTANS-FGAAGSLAVLMMWLYFSAAVFLLGAEVASAMD 286
>gi|284047276|ref|YP_003397616.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283951497|gb|ADB54241.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 290
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 107/262 (40%), Gaps = 4/262 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAW 70
+ E + ++ ++ + LLS+FPF++ + G + + ++++ + +
Sbjct: 16 LKLLWRMAYEANVTGLSGMVAYNLLLSIFPFVLLVLFVVGQVVRSEATEASIVNEIQRLF 75
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + + V A + ++ + + ++ A+ + R Y RSW
Sbjct: 76 PQAAESSVRNTLATVRDN-ATSIGIVALVGGIWVGTSFWGAMDTAFCRIYDSP-CRSWVK 133
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGRIYATMLAL 189
+L + +++A++ L + L + P L N I + L
Sbjct: 134 QKLFALAMLVVAALFLAASVALPALQAAVLVGAGEVLPFGLANWHAFTLGLGIAGGVTVL 193
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F +++ +P+ +I PG + + + F Y+ ST ++ +GL ++
Sbjct: 194 FAVTCVIYVAVPSGALPWRAIWPGALLATLGVTLVNWAFPFYLTDVSTIGSLGSGLGFLL 253
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
LV+ Y++ +LG LN+S
Sbjct: 254 IVLVWFYVVAFVLLLGGVLNSS 275
>gi|118471083|ref|YP_887086.1| hypothetical protein MSMEG_2755 [Mycobacterium smegmatis str. MC2
155]
gi|118172370|gb|ABK73266.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 330
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 107/276 (38%), Gaps = 13/276 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG---AHQFVPTV 62
+ I + ++ ++ ++ + LS+ P ++ ++ + +PT+
Sbjct: 13 HHIRHIAKRTLSKSWDDSIFSESAQAAFWCALSLPPLLLGMLGSLAYIAPLFGPETLPTI 72
Query: 63 IDVVFGAW-----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + A P V+ + I I ++ + +I + + + S+ V A S+
Sbjct: 73 QNQLITAANSFFSPNVVNEIIEPTIRDIVKGARGEVVSIGFVISLWAGSSAVSAFVDSIV 132
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
A+ +R R + G ++ V + + + P + + P + L
Sbjct: 133 EAHDQTPLRHPVRQRFYALGLYVVMLVGAIAAAPLVALGP---RKIAEQLPDSWDNALH- 188
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G A A+ + + ++ +L G + + ++V V Y+ ++
Sbjct: 189 -YGYYPALFFAVALFVTVLYRVSLPEPLPTHRLLLGTVLATVVFLVTTVGLRVYLTWITS 247
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y LA+ + L+F + LG ++GAELNA++
Sbjct: 248 TGYTYGALATPIAFLLFAFFLGFAIMIGAELNAAIQ 283
>gi|260549795|ref|ZP_05824011.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter sp.
RUH2624]
gi|260407045|gb|EEX00522.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter sp.
RUH2624]
Length = 415
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 104/282 (36%), Gaps = 8/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F I I+ F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFILFVIKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D+ L + L I L + + + NR
Sbjct: 69 QQLQHLIYSNFLPKSTIAF--DKALNAFTEKSSNLTVIGVLFLFVTTVLMLTTIETVFNR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E RS + + + ++ ++ +FV + ++ + F +
Sbjct: 127 IWRVKETRSGIVG-FMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLDGAFL- 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +G ++ +P + S + + + + LF+ + F++Y
Sbjct: 185 --LWLISFVLTVLGFFILYWTIPNRTVPLFSAAIAACLSAVLFEILKNLFSFVMSNFTSY 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 243 EIIYGAFAAVPIFLLWVFLSWNIVLLGVEVSFALTAFHSGKE 284
>gi|262377264|ref|ZP_06070488.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter lwoffii
SH145]
gi|262307717|gb|EEY88856.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter lwoffii
SH145]
Length = 415
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/277 (14%), Positives = 103/277 (37%), Gaps = 8/277 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYEKHWFQFVLFVLRRFETDRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D+ L + L I L + + ++ NR
Sbjct: 69 QQLQQLIYSNFLPKTTIAF--DKALNAFTDKSSNLTIIGILFLFVTTVLMLSSIETVFNR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E R + + + ++ L+ +FV + +++ + F +
Sbjct: 127 IWRVTETRGGIMG-FMRYWTIISLGPILLGSAFVISSTVASMSILSNNFAGYELDGAFV- 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ +G ++ +P + S +F+ + + + LF + + F++Y
Sbjct: 185 --LWAISFSLTVLGFFILNWTIPNRSVPLKSAFIAGLFSAVVFELLKNLFGYIMSNFTSY 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y A++ L+++Y+ + +LG E++ ++ +
Sbjct: 243 EIVYGAFAAVPIFLLWIYLSWIIVLLGVEISYALTAF 279
>gi|120610141|ref|YP_969819.1| putative ribonuclease BN [Acidovorax citrulli AAC00-1]
gi|120588605|gb|ABM32045.1| tRNA-processing RNAse BN [Acidovorax citrulli AAC00-1]
Length = 446
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + LL++ PF + + + T + +V P+ I
Sbjct: 31 ERFREDRLGLTASSLTFTTLLALVPFFTVALAIFTAFPIFRTLQTGLQRWLVDSLVPDSI 90
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ + + Q A A GL + + + +LN +RV +R + + +
Sbjct: 91 SRQVLGYLTQ-FAAKASGLGVAGFSILLATALALILTIDRTLNNIWRVPRLRP--LGQRV 147
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ ++ LV+ + + + +A + R AL + ++++ L L G
Sbjct: 148 LIYWAVITLGPLVLAASLALTTSVASSASRGLEGALPDSARLLFDS---IEFLLLAGGTA 204
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + + G +F + V + YI + TYS +Y A++ LV+
Sbjct: 205 ALYRYVPNTQVRWRHAWSGGVFVSVGIEVAKKVLGLYIASVPTYSVLYGAFATLPILLVW 264
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 265 IYVAWVIVLLGAVVAAYL 282
>gi|83858285|ref|ZP_00951807.1| ribonuclease BN, putative [Oceanicaulis alexandrii HTCC2633]
gi|83853108|gb|EAP90960.1| ribonuclease BN, putative [Oceanicaulis alexandrii HTCC2633]
Length = 305
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 104/280 (37%), Gaps = 8/280 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VV 66
+ AI+ + + A LL++ P ++ A++ G + + + V
Sbjct: 19 LKVTVRAIDRMMAREVMLFAGGAGFFGLLALVPAVLVAASVYGLVFSEDDAVAQVARLQV 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYRVV 123
P +T ++ Q+ L +A A + ++ G +A+ LN+ R
Sbjct: 79 TAVLPPSAHTFLTSQLSQLAGSSNTSLTVQGVIALFIAWFAAARGAKAIIAGLNQIARRG 138
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
++R+ L++ G V+ LV+ + + IP + + +
Sbjct: 139 DLRNILHFNLLAMGAVIAGGALLVMANLAILTIPNMIRPALRMLGSDAADFGASLINEWS 198
Query: 184 ATMLALFIGLIFVHLFL--PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ LA+ L+ ++ F+ A ++ + G W++ + FT Y+ T S
Sbjct: 199 ISYLAMLTALLLLYRFVMQRAGETSWTASFIGAATAATIWLIASKGFTLYVATIVNPS-T 257
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y L +++ L+++Y G L + + P
Sbjct: 258 YGPLGTLIVFLLWVYWTSYAVFFGGALGVEIDRHRGEAHP 297
>gi|238027745|ref|YP_002911976.1| YihY family protein [Burkholderia glumae BGR1]
gi|237876939|gb|ACR29272.1| YihY family protein [Burkholderia glumae BGR1]
Length = 434
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 99/274 (36%), Gaps = 7/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A E+ +A ++ + +L++ P + L +
Sbjct: 8 LDTIKRLARFAARRGGEDRIPQVAGSLTFTTILALVPLVTVAFALFTAFPIFSSFQASLQ 67
Query: 65 VVFG--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
P I I + Q + AKGL T + + + + + N +RV
Sbjct: 68 SFLADHLMPAQINNQIFKYLNQ-FSAKAKGLTTAGLIVLVVTAVMTMMTIESAFNVIWRV 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++++ + L +S + + PA + +
Sbjct: 127 RKPRPF-AQRVLAYWAFITLGPLLFGVSLSISSYLFTKSLAFAGAPATPSSFEWLLTA-- 183
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A++ + ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 184 -ASLPLTVVAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAVY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + + GA + +++
Sbjct: 243 GAFAAVPLFLLWVYLSWLITLAGAMIASALPAIR 276
>gi|302556239|ref|ZP_07308581.1| ribonuclease BN [Streptomyces viridochromogenes DSM 40736]
gi|302473857|gb|EFL36950.1| ribonuclease BN [Streptomyces viridochromogenes DSM 40736]
Length = 321
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 81/274 (29%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ D+ F DG+ A ++ +L + P V LA + + +
Sbjct: 33 LRLLADSFVRFRYADGFTNARALAFQVVLGLVPCTVALVGLATSVHTEGVGRVIELTLGR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + + A ++ + + NR Y +
Sbjct: 93 IVPGASADIVEDAFEGTRRTAHGDVWSTLALWLGLGFALLNLASAMGQIERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + L A + LV V VA V + G
Sbjct: 153 RDRPFPRKYARAIVLALAAGLPLVSGFVVLVAGEAVGEAVAETAGWEGGGPQWWGVLDFP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ ++ + + P + L G + WV L Y+ + +Y
Sbjct: 213 VGLVLAWVASAVIFRWSPRRVQPGYTWLAFGSAVHLLLWVSATWLLALYVERSGAFGAVY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + V LG A +
Sbjct: 273 GPLTAFVALLLWANLTAVALFLGIAFAAQLEAAR 306
>gi|261211303|ref|ZP_05925592.1| ribonuclease BN [Vibrio sp. RC341]
gi|260839804|gb|EEX66415.1| ribonuclease BN [Vibrio sp. RC341]
Length = 309
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/265 (15%), Positives = 96/265 (36%), Gaps = 8/265 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVF 67
+ + A +++ LLS+ P + ++ VI D V
Sbjct: 16 LHFFRYLLSRMNHDRVNVNAGYLAYITLLSIVPMLTVLLSILSSFSIFASAGEVIQDFVI 75
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + + +++ +A + + + + + +LN +RV + R
Sbjct: 76 THFVPAAGEVVKTALVEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYIWRVQQKRR 134
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + + +L LV S + +L + L + +
Sbjct: 135 AVFSFSM-YWMILTLGPILVGASIAATSYITSLKILDN-----ETLSGAYNLFLRWLPFV 188
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++L +P K + + G + + + + F YI F +Y +Y LA+
Sbjct: 189 LSYCAFVGLYLLVPNKKVHLQHAMTGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAA 248
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I V++Y+ + ++GAE+ A++
Sbjct: 249 IPILFVWVYLCWLIVLVGAEVTAAL 273
>gi|254248683|ref|ZP_04942003.1| Ribonuclease BN [Burkholderia cenocepacia PC184]
gi|124875184|gb|EAY65174.1| Ribonuclease BN [Burkholderia cenocepacia PC184]
Length = 314
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 104/265 (39%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSDRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR----- 126
A I + A GL T+ + AA +S +L +L+ + E R
Sbjct: 83 AAASIQTIVQNAHRAGERGGLATLISFAALAIGASATFASLSAALSVIWPATESRWSSML 142
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RLISFG VL + L++ + A+ ++ + +++ + + +
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFIGTWLLGDSPYVVVTNLVQFFVGI 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + FLP A+ G I + I + G LF Y+ T ++ +
Sbjct: 199 AVLAAAFASLMKFLPDARVAWRDAAIGGIVSAILFSGGKKLFALYLAHAGT-ASAFGAAG 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY + +LGAE A+
Sbjct: 258 SFAVLLMWLYFSAIVLLLGAEFAAA 282
>gi|193212993|ref|YP_001998946.1| ribonuclease BN [Chlorobaculum parvum NCIB 8327]
gi|288559217|sp|B3QP93|Y1343_CHLP8 RecName: Full=UPF0761 membrane protein Cpar_1343
gi|193086470|gb|ACF11746.1| ribonuclease BN [Chlorobaculum parvum NCIB 8327]
Length = 426
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 96/255 (37%), Gaps = 9/255 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEV 73
HFV ++ A ++ LLS+ P + ++ + D +F +
Sbjct: 29 MARHFVHDNILMSAGSLAFQTLLSLVPLMAVSLSILRVFPVFGSLKQNIGDFLFQNFAPA 88
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + + + L T+ + + + + +LN + V R
Sbjct: 89 QGALMKTYLWEFIDKTSS-LSTVGGIFLIVIALFLISTIDHTLNGIWEVQAPRK------ 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ G+ L +V L + + +A +YV A G LL Y ++ I L
Sbjct: 142 VMQGFTLYWTV-LTLGPLLIGTSVVASSYVWYSVFAGGELLQQKVTVLSYLPLINTAIAL 200
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P K + L G + + + + F Y+ F+T+ +Y L+ +
Sbjct: 201 FLLYMVVPNRKVRFRHALAGGVLAALLFELAKRWFAFYVANFATFEAIYGALSVVPMLFF 260
Query: 254 FLYMLGVFFILGAEL 268
++Y+ V + GAE
Sbjct: 261 WIYLEWVVVLTGAEF 275
>gi|319953362|ref|YP_004164629.1| ribonuclease bn [Cellulophaga algicola DSM 14237]
gi|319422022|gb|ADV49131.1| ribonuclease BN [Cellulophaga algicola DSM 14237]
Length = 313
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/285 (18%), Positives = 116/285 (40%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
+ + +I D + + + + W +++ ++ A+LS+ ++ N+ G + + V
Sbjct: 8 KFKLKDLPSLIVDTYKAWDKANPWRLSAVVAYYAVLSLPALLIIIINIVGSIWGTEIVQG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRA 119
+ + A A+ I I + + TI + F + GV L++SLN
Sbjct: 68 RLTSEISTALGSNAAEAIETIIAETQNKEENLISTIIGIGTLLFGATGVFYQLKLSLNEM 127
Query: 120 YRVVEMRS--WYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ + + ++ R SF ++L+ L++ V I Y+RK FP + +
Sbjct: 128 WHIKPNPNANFWKLVTDRARSFAFILVIGFLLLVSFIVTAGISALNEYIRKVFPDILIYI 187
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + ++ + + + ++P AK + ++ G + T + +V+G L Y
Sbjct: 188 AYILDF--TVSIGIITVLFALMFRYMPDAKIRWKTVWIGALITAVLFVIGKSLLGFYFGE 245
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + Y +I+ L+++ + GAE Y K
Sbjct: 246 -ANPGSTYGAAGTIVLILLWVSYSCLILFFGAEFTYIYAKRYGHK 289
>gi|149199775|ref|ZP_01876806.1| membrane protein-like protein [Lentisphaera araneosa HTCC2155]
gi|149137180|gb|EDM25602.1| membrane protein-like protein [Lentisphaera araneosa HTCC2155]
Length = 443
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 95/269 (35%), Gaps = 3/269 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ I + I F + + AS ++ +LS+ P + F + +G +
Sbjct: 28 QKVKIIALRSLKVLINDFNKNNLPLQASALTNITVLSMLPTLAFVFAFSKAMGLADMIKD 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ FG PE I + + K + + + + + + + + S N +
Sbjct: 88 QQEFFFGELPEQIRDILLQVFTLIDQANLKAVGLVGIAISMFTAISMMSKIEHSFNMIWG 147
Query: 122 VVEMRSWY--ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + R + + L + + F++ Y+ +
Sbjct: 148 IKKNRDLMTKVKEYLFIFVTLPPILIATASANAFLSSNKVQEYLTTNLFLGEGIFEFYSL 207
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L + G F++ FLP K I W + ++ + + S+Y
Sbjct: 208 LVKIISPLIIAFGFTFLYRFLPNTKVNFRPAFIASFLVTIGWSLTQYIYVNLQIGVSSY- 266
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A I LV+L++ + +LGA+L
Sbjct: 267 PLYGTFAVIPFFLVWLFIAWLIILLGAQL 295
>gi|257056430|ref|YP_003134262.1| hypothetical protein Svir_24410 [Saccharomonospora viridis DSM
43017]
gi|256586302|gb|ACU97435.1| predicted membrane protein [Saccharomonospora viridis DSM 43017]
Length = 402
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 84/210 (40%), Gaps = 5/210 (2%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
V+ + I + +L + ++ L + + S+ + + ++ A+ +R+
Sbjct: 98 SVVQQIIAPTVDDILTTGKGEIVSVGFLISLWAGSSAMSSFVDAITVAHDQYGVRNEVWQ 157
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR--IYATMLAL 189
R+ + L + V LVI + P + +FFP + W + L
Sbjct: 158 RIFALLLYLGSLVLLVIGLPIIAIGP---DLLPEFFPDDWKPTIASWLSVLYYPTVAVLL 214
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ K LPG + + +++ +V YI +T Y LA+ +
Sbjct: 215 VLALATLYKLALPRKLPWHRGLPGAVLAMVIFLLSSVGLRFYISWITTTGYTYGALATPI 274
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+F + +G+ + GA N+++ + K
Sbjct: 275 AFLLFTFFIGLAIVAGAYFNSAIQELWPAK 304
>gi|227548227|ref|ZP_03978276.1| ribonuclease BN [Corynebacterium lipophiloflavum DSM 44291]
gi|227079701|gb|EEI17664.1| ribonuclease BN [Corynebacterium lipophiloflavum DSM 44291]
Length = 377
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 104/279 (37%), Gaps = 18/279 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVFGA 69
+ F + A+ ++ A+LS+ P ++ ++A L + ++V
Sbjct: 54 KRVVMDFGMDAMVDRAAALTYYAVLSLAPTVLALYSIAVLLLPRDKEAVAELLAELVAMY 113
Query: 70 WPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + + V+ P++ +S L + +S V + + N Y VE R
Sbjct: 114 VPKELRSDALAFLQNVVGSPSQSTVALIVSVLVSLLSASAYVRSFSRNANVIYGRVEGRR 173
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV----------RKFFPALGNLLLII 177
+ L + ++ V++ F + + V + L + L +
Sbjct: 174 LPVIWLTMWLLTIVLVAGAVLLIFASLLRESLVTGVMRPIAEPLGLTQTVEYLTQIFLPV 233
Query: 178 WNG-RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
W RI + + + ++ F P + + + G F + V LF Y+ T
Sbjct: 234 WGWVRIPVMVAVSVLLVALLYYFSPNVRPGRFRLLTLGSFFALLVVGVVWALFGLYLSTI 293
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
S Y I+ LV L+ + + +LG +++A ++
Sbjct: 294 GVRSA-YGAFGIILALLVVLWAMNIVLLLGLKIDAEVLR 331
>gi|119776536|ref|YP_929276.1| ribonuclease BN [Shewanella amazonensis SB2B]
gi|119769036|gb|ABM01607.1| tRNA-processing RNAse BN [Shewanella amazonensis SB2B]
Length = 303
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 102/265 (38%), Gaps = 8/265 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAW 70
+ + E+ A H++ LLS+ P + ++ Q + I+ V+
Sbjct: 1 MLHLVSRLKEDQINVRAGHLTYVTLLSLVPMVAVTMSVLSAFPVFQGIRGTIETFVYENM 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ I + + +KG + + + A+ SLN +R E R + +
Sbjct: 61 IPAAGDTVQTYINEFVKNASKG-TAVGIGFLVVVAIMLISAIDKSLNAIWRTKEKRRFMV 119
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + VL L+ S + ++L + + ++ ++ ++
Sbjct: 120 AFSM-YWMVLTLGPVLMGASIAVTSYLVSLKVLSE-----ADVYGVVPMLIEKLPLMFSV 173
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ +++ +P K K + L G + + + G F Y+ TF +Y +Y LA+I
Sbjct: 174 AAFLLLYMAVPNQKVKFLHALLGALVAALLFEAGKRGFALYVTTFPSYEAIYGTLATIPI 233
Query: 251 CLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ + G + A++ Y
Sbjct: 234 LFVWVYLSWTIVLFGGVIAAALPEY 258
>gi|299066569|emb|CBJ37759.1| tRNA-processing ribonuclease BN [Ralstonia solanacearum CMR15]
Length = 438
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 114/274 (41%), Gaps = 13/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
+ + A+ E+ +A ++ + +LS+ P + L Q + I+ +
Sbjct: 16 LRALQRYALRRAGEDSLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFQSFRSAIEGYL 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P I++PI + Q + AKGL + S + + +LN +RV +
Sbjct: 76 FSNLVPGNISRPILTYLNQ-FSHNAKGLTAAGLVGLVVTSVMTMLTVENALNAIWRVRQR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA--YVRKFFPALGNLLLIIWNGRIY 183
R R++ F ++ L+ S + ++++ YV K LG ++ ++
Sbjct: 135 RP-LAQRVLVFWALVSFGPVLIGASLSVSSYLVSISAGYVAKLPYGLGVVVGLV------ 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + +++F+P + +++ + F +Y+ F TY+ +Y
Sbjct: 188 -PILLSAVAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYG 246
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++Y+ + +LGA + A++ I
Sbjct: 247 TFAALPIFLLWIYVSWLVTLLGATIAATLPIIRQ 280
>gi|288576153|ref|ZP_05978283.2| YihY family protein [Neisseria mucosa ATCC 25996]
gi|288566202|gb|EFC87762.1| YihY family protein [Neisseria mucosa ATCC 25996]
Length = 418
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 8/266 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
VF + + F EE AS ++ + LL++ P + +A ++ + + V
Sbjct: 23 VFAFAWFVVRRFDEERVPQAASSMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVAFV 82
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 83 NQTIVPQGADMVFDYI-NAFRDQAGKLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNTQR 141
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V + + + F P +L +AT+
Sbjct: 142 PWMMQFLVYWALLTFGPLSLGVGISFMV-GSVQDSALASFAPQWVVGVLQTLGTLFFATL 200
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L ++ F+P G + T LF Y+ F Y ++Y A
Sbjct: 201 L-----LWGLYRFVPNRFVPARHAFIGALVTAFCLETARFLFAWYMGNFDGYRSIYGAFA 255
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
++ LV+L +L + GA L +S+
Sbjct: 256 AVPFFLVWLNLLWTLVLGGAVLTSSL 281
>gi|331649730|ref|ZP_08350810.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli M605]
gi|330908203|gb|EGH36722.1| ribonuclease BN [Escherichia coli AA86]
gi|331041363|gb|EGI13513.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli M605]
Length = 290
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|258620385|ref|ZP_05715423.1| tRNA processing ribonuclease BN [Vibrio mimicus VM573]
gi|262170328|ref|ZP_06038006.1| ribonuclease BN [Vibrio mimicus MB-451]
gi|258587264|gb|EEW11975.1| tRNA processing ribonuclease BN [Vibrio mimicus VM573]
gi|261891404|gb|EEY37390.1| ribonuclease BN [Vibrio mimicus MB-451]
Length = 309
Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 96/261 (36%), Gaps = 8/261 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWP 71
+ + A +++ LLS+ P + ++ VI D V +
Sbjct: 20 RYLLTRMKHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFSIFASAGDVIQDFVITHFV 79
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + +++ +A + + + + + +LN +RV R +
Sbjct: 80 PAAGEVVKTALVEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYIWRVQRKRRAVFS 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + +L LV S + +L + L + + F
Sbjct: 139 FSM-YWMILTLGPILVGASIAATSYITSLKILDN-----EALSGAYNLFLRWLPFVLSFC 192
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++L +P K ++ + G + + + + F YI F +Y +Y LA+I
Sbjct: 193 AFVGLYLLVPNKKVRLPHAMAGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIPIL 252
Query: 252 LVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 253 FVWVYLCWLIVLVGAEVTAAL 273
>gi|17546278|ref|NP_519680.1| ribonuclease BN transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|81505092|sp|Q8XZ47|Y1559_RALSO RecName: Full=UPF0761 membrane protein RSc1559
gi|17428575|emb|CAD15261.1| putative ribonuclease bn transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 441
Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 105/272 (38%), Gaps = 9/272 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
+ + A+ E+ +A ++ + +LS+ P + L Q I+ +
Sbjct: 16 LRALQRYALRRAGEDSLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFQSFRAAIEGYL 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P I++PI + Q + AKGL + S + + +LN +RV +
Sbjct: 76 FSNLVPGNISRPILTYLNQ-FSHNAKGLTAAGLVGLVVTSVMTMLTVENALNAIWRVRQR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R L+ + L S V++ ++ + L L ++
Sbjct: 135 RPLAQRVLV---FWALVSFGPVLIGASLSVSSYLVSVSAGYVAKLPYGLGVVVG---LVP 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L I +++F+P + +++ + F +Y+ F TY+ +Y
Sbjct: 189 ILLSAIAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYGTF 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++Y+ + +LGA + A++ I
Sbjct: 249 AALPIFLLWIYVSWLVTLLGATIAATLPIIRQ 280
>gi|224370355|ref|YP_002604519.1| predicted tRNA processing ribonuclease Rbn (RNase BN)
[Desulfobacterium autotrophicum HRM2]
gi|223693072|gb|ACN16355.1| predicted tRNA processing ribonuclease Rbn (RNase BN)
[Desulfobacterium autotrophicum HRM2]
Length = 436
Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 113/269 (42%), Gaps = 2/269 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + VF + A++ F +++ AS ++ LLS+ P + +A G +
Sbjct: 22 LKAFATRVFLTVVAAVKGFQKDNCMLRASALTFYTLLSIVPVMAMAFGIAKGFGFETMLR 81
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRA 119
I ++ A E A+ I D +LA G+ + + A+ + + + N
Sbjct: 82 KEI-LLRLAGHEEAAQRIIDFSGTLLAETKGGVMAAVGVIFLAWAVVKMLGHMEDAFNTI 140
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + + R+ G + +A + L++ V I L + + + ++
Sbjct: 141 WWIKKGRTLVRKFSDYLGLLFVAPLLLILSGSTTVFILTRLKVFFEATGGVVFVEPFVFF 200
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++I F+++F+P K I + + G + + +G +++ + V S Y+
Sbjct: 201 FVKLLPFFTIWILFFFLYMFMPNKKVDIRAAVMGALIAGGVYQMGQMIYFRFQVGVSHYN 260
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L V +LGAE+
Sbjct: 261 AIYGSFAALPLFLIWLQASWVLLLLGAEI 289
>gi|117626154|ref|YP_859477.1| ribonuclease BN [Escherichia coli APEC O1]
gi|166199577|sp|A1AI63|YIHY_ECOK1 RecName: Full=UPF0761 membrane protein yihY
gi|115515278|gb|ABJ03353.1| tRNA processing exoribonuclease BN [Escherichia coli APEC O1]
gi|323949375|gb|EGB45264.1| YihY family protein [Escherichia coli H252]
Length = 290
Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 102/280 (36%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + +L L S A L+L + +L +I N
Sbjct: 129 RSKRARPKIYSFAV-YWMILTLGPLLAGASLAISAYLLSLRWA-------SDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|224535450|ref|ZP_03675989.1| hypothetical protein BACCELL_00313 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522916|gb|EEF92021.1| hypothetical protein BACCELL_00313 [Bacteroides cellulosilyticus
DSM 14838]
Length = 438
Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 106/265 (40%), Gaps = 6/265 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + +
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNNASALTYSTLLAIVPILAILFAIARGFGFSNLMENQVR 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV 123
+ FG + I + L+ G+F + + + N + + I+ NR +++
Sbjct: 91 MGFGG-HNQTTEVILQFVDSYLSETKSGIFIGVGLIMLLWTVINLITNIEITFNRIWQIK 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RS Y F LL + +VI + + + L Y+ F L +L + +
Sbjct: 150 KARSMYRKITDYFSMFLLMPILIVISGGLSIFMSTTLKYIEDFV-LLAPILKFLIRLIPF 208
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A +F G +++++P K K L + + L+ + S Y+ +Y
Sbjct: 209 ALTWFMFTG---LYIYMPNTKVKFKHALIAGVLAGTAHQAFQFLYISGQLWVSRYNAIYG 265
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + + GAEL
Sbjct: 266 SFAALPLFLLWLQISWTICLFGAEL 290
>gi|262280182|ref|ZP_06057966.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257960|gb|EEY76694.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 415
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 103/282 (36%), Gaps = 8/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFVLYVFKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D+ L + L I L + + ++ NR
Sbjct: 69 QQLQHLIYSNFLPKSTIAF--DKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E RS + + + ++ ++ +FV + ++ + F I
Sbjct: 127 IWRVKETRSGIMG-FMRYWTIISLGPIILGSAFVISSTVASMNILSNNFAGYQLDGSFI- 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +G ++ +P + + + + + LF+ + F++Y
Sbjct: 185 --LWMISFVLTIVGFFILYWTIPNRTVPVYAAGIAACLSAALFEILKNLFSFVMSNFTSY 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 243 ELIYGAFAAVPIFLLWIFLSWNIILLGVEVSFALTAFHSGKE 284
>gi|215489214|ref|YP_002331645.1| ribonuclease BN [Escherichia coli O127:H6 str. E2348/69]
gi|312969373|ref|ZP_07783575.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|254789778|sp|B7UNK3|YIHY_ECO27 RecName: Full=UPF0761 membrane protein yihY
gi|215267286|emb|CAS11735.1| predicted inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
gi|312285920|gb|EFR13838.1| conserved hypothetical protein [Escherichia coli 2362-75]
Length = 290
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 KHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|300931681|ref|ZP_07146988.1| YihY family protein [Escherichia coli MS 187-1]
gi|300460520|gb|EFK24013.1| YihY family protein [Escherichia coli MS 187-1]
Length = 290
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 98/276 (35%), Gaps = 10/276 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-D 64
++ + + E++ +A +++ +LLS+ P + L V +
Sbjct: 14 RPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSIQLRH 73
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+F + I I Q +A K + + A + + ++ +LN +R
Sbjct: 74 FIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIWRSKR 132
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R Y ++ + + LA++ +L +I N
Sbjct: 133 ARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRIF 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L +I ++ +P + + G + + G F YI F +Y +Y
Sbjct: 185 PLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQLIYGV 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I V++Y +LGAE+ ++ Y K+
Sbjct: 245 LAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|172062909|ref|YP_001810560.1| ribonuclease BN [Burkholderia ambifaria MC40-6]
gi|171995426|gb|ACB66344.1| ribonuclease BN [Burkholderia ambifaria MC40-6]
Length = 310
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 101/266 (37%), Gaps = 13/266 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPE 72
+A + F AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 22 NAFKRFSSHRCSAMAASIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGD 81
Query: 73 VIAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR---- 126
A I + A G+ T+ + AA +S +L +L+ + E R
Sbjct: 82 DAAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALSVIWPSTENRWSSM 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + + ++ + + I ++
Sbjct: 142 LGLVRVRLISFGLVLGVAFLLIVSLVL----DTVITFIGTWLLGDSPYVAITNVLQLVVG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A + G I + I + G LF Y+ T ++ +
Sbjct: 198 VAVLAGAFAVLMKFLPDAHVAWHDAVIGGIVSAILFSGGKKLFALYLARAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY +LGAE A+
Sbjct: 257 GSFAVLLMWLYFSAAVLLLGAEFAAA 282
>gi|329296755|ref|ZP_08254091.1| hypothetical protein Pstas_09616 [Plautia stali symbiont]
Length = 290
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 105/281 (37%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F I E++ A +++ +LL++ P I L +
Sbjct: 7 LRHSAHAFFLWIKLLWRRIDEDNMTTQAGNLAYVSLLALVPLIAVVFALFAAFPVFSDIS 66
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + +F + I + Q +A K + + A+ + + ++ +LN
Sbjct: 67 VQLKNFIFTNFMPAAGDVIQRYLDQFVANVNK-MTAVGAVGLIVTALLLMHSVDSALNAI 125
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R + R + + + +L L S + L+L +V + + +I
Sbjct: 126 WRSDKPRPMVYSFAV-YWMILTLGPLLAGASLAISSYLLSLRWVN-----VTGVTSLIDQ 179
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ + ++ +P + L G + + + +G F Y+ FS+Y
Sbjct: 180 ALRIFPLVLSILAFWLLYSIVPTRRVPGHDALIGAVVAGLLFELGKKGFALYVTMFSSYQ 239
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I +++Y +LGAE+ ++ Y K+
Sbjct: 240 LIYGVLAVIPILFLWVYWTWCIVLLGAEVTVTLDDYRQLKQ 280
>gi|218708190|ref|YP_002415811.1| ribonuclease BN [Vibrio splendidus LGP32]
gi|254789783|sp|B7VHE7|Y126_VIBSL RecName: Full=UPF0761 membrane protein VS_0126
gi|218321209|emb|CAV17159.1| tRNA-processing ribonuclease BN [Vibrio splendidus LGP32]
Length = 313
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 97/261 (37%), Gaps = 8/261 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWP 71
+ + A +++ LLS+ P + ++ V VI + V +
Sbjct: 24 RYLLTRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSSFSVFADVGLVIQNFVITNFV 83
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ +L+ +A + + ++ + + + +LN +RV E R ++
Sbjct: 84 PASGDAVHGALLEFVAN-TGKMTAVGSVFLFIAALMLISNIDKNLNYIWRVTEKRRAVLS 142
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + VL L+ S + +L ++ + ++ F
Sbjct: 143 FSM-YWMVLTLGPILIGASIAATSYVTSLNLLQNEV-----VSSAFNTVIRKLPLITSFF 196
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++L +P K G + + + + F YI F +Y +Y LA+I
Sbjct: 197 AFFGLYLLVPNKKIHFSHAAAGSLVAALLFELSKKGFAAYITQFPSYQLIYGALAAIPIL 256
Query: 252 LVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 257 FVWVYLCWLIVLVGAEVTAAL 277
>gi|114329060|ref|YP_746217.1| ribonuclease BN [Granulibacter bethesdensis CGDNIH1]
gi|114317234|gb|ABI63294.1| ribonuclease BN [Granulibacter bethesdensis CGDNIH1]
Length = 289
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 106/269 (39%), Gaps = 10/269 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVID 64
+ I+ DA ++ ++ + + I+ + S+ P +V +AG G ++
Sbjct: 2 KRILAILKDAAGGYLADNCLSRGAAIAYYTVFSMSPVLVIVIAVAGTLFGEEAARGAIVS 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVV 123
+ G + A+ + I A + T+ + +++GV ++ +LN +R
Sbjct: 62 QLGGLMGKQAAEALQAMIASAGRHGAGPIATVIGIGTLLITASGVFGEIQATLNVIWRAE 121
Query: 124 EMRS----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
RS RL+S G V+ L++ + ++ F P L++
Sbjct: 122 PPRSTVGQLVRVRLLSLGLVMTMGFLLMVSLVASAVLAAIGDWLDSFIP---ETRLLLQL 178
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + + + LP + G + T + + VG +L YI + S +
Sbjct: 179 ANAGMSFFIIALIFGATYKILPDRVIAWRDVGMGAVTTALLFSVGKMLIGMYIGS-SNAA 237
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T Y +++ L+++Y F+ GAEL
Sbjct: 238 TSYGAAGALVIMLLWVYYSAQIFLFGAEL 266
>gi|24115176|ref|NP_709686.1| ribonuclease BN [Shigella flexneri 2a str. 301]
gi|32699633|sp|Q83MJ2|YIHY_SHIFL RecName: Full=UPF0761 membrane protein yihY
gi|24054456|gb|AAN45393.1| tRNA processing exoribonuclease BN [Shigella flexneri 2a str. 301]
Length = 290
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLPLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|90581077|ref|ZP_01236877.1| ribonuclease BN [Vibrio angustum S14]
gi|90437773|gb|EAS62964.1| ribonuclease BN [Vibrio angustum S14]
Length = 303
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 108/271 (39%), Gaps = 10/271 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ D I+ + A ++ LLS+ P I + + + +
Sbjct: 9 KIHLMMDYFSYLIQRVNHDRLTVTAGSMAYVTLLSLVPLITVVISALSAVPVFAGLGEQL 68
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYR 121
+ V + + + + ++ G T +AA + + + ++ SLN +R
Sbjct: 69 QNFVIENFVPAAGAVVKTYLNEFVS--NAGKMTAVGIAALFVVAMMLISSIDTSLNYIWR 126
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R W I+ S +++L +++ S + V+ L + + L ++
Sbjct: 127 IKKKRRWVIS--FSIYWMILTLGPILLGSSIAVSSYLGSLALLEH----QALHGLLQQSL 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + + ++L +P K L G + I + + F Y+ F +Y +
Sbjct: 181 RWFPSLMSSLAFLLLYLLVPNCKVTFRHALIGSLSASILFELSKKGFAIYLAHFHSYQMI 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y LA+I V++Y+ +LGAE+ AS+
Sbjct: 241 YGALAAIPILFVWIYLCWCIVLLGAEITASL 271
>gi|107026729|ref|YP_624240.1| ribonuclease BN, putative [Burkholderia cenocepacia AU 1054]
gi|116692078|ref|YP_837611.1| putative ribonuclease BN [Burkholderia cenocepacia HI2424]
gi|105896103|gb|ABF79267.1| ribonuclease BN, putative [Burkholderia cenocepacia AU 1054]
gi|116650078|gb|ABK10718.1| putative ribonuclease BN [Burkholderia cenocepacia HI2424]
Length = 314
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 59/265 (22%), Positives = 104/265 (39%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSDRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR----- 126
A I + A GL T+ + AA +S +L +L+ + E R
Sbjct: 83 AAASIQTIVQNAHRAGERGGLATLISFAALAIGASATFASLSAALSVIWPATESRWSSML 142
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RLISFG VL + L++ + A+ +V + +++ + + +
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFVGTWLLGDSPYVVVTNLVQFFVGI 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + FLP A+ G I + I + G LF Y+ T ++ +
Sbjct: 199 AVLAAAFASLMKFLPDARVAWRDAAIGGIVSAILFSGGKKLFALYLAHAGT-ASAFGAAG 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY + +LGAE A+
Sbjct: 258 SFAVLLMWLYFSAIVLLLGAEFAAA 282
>gi|15804472|ref|NP_290512.1| ribonuclease BN [Escherichia coli O157:H7 EDL933]
gi|15834063|ref|NP_312836.1| ribonuclease BN [Escherichia coli O157:H7 str. Sakai]
gi|16131726|ref|NP_418322.1| predicted inner membrane protein [Escherichia coli str. K-12
substr. MG1655]
gi|26250648|ref|NP_756688.1| ribonuclease BN [Escherichia coli CFT073]
gi|30064825|ref|NP_838996.1| ribonuclease BN [Shigella flexneri 2a str. 2457T]
gi|82778941|ref|YP_405290.1| ribonuclease BN [Shigella dysenteriae Sd197]
gi|89110142|ref|AP_003922.1| tRNA processing exoribonuclease BN [Escherichia coli str. K-12
substr. W3110]
gi|91213427|ref|YP_543413.1| ribonuclease BN [Escherichia coli UTI89]
gi|110644224|ref|YP_671954.1| ribonuclease BN [Escherichia coli 536]
gi|110807428|ref|YP_690948.1| ribonuclease BN [Shigella flexneri 5 str. 8401]
gi|157154769|ref|YP_001465370.1| ribonuclease BN [Escherichia coli E24377A]
gi|157163356|ref|YP_001460674.1| ribonuclease BN [Escherichia coli HS]
gi|168748830|ref|ZP_02773852.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4113]
gi|168755559|ref|ZP_02780566.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4401]
gi|168761742|ref|ZP_02786749.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4501]
gi|168768176|ref|ZP_02793183.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4486]
gi|168775292|ref|ZP_02800299.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4196]
gi|168780792|ref|ZP_02805799.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4076]
gi|168799547|ref|ZP_02824554.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC508]
gi|170022102|ref|YP_001727056.1| ribonuclease BN [Escherichia coli ATCC 8739]
gi|170083358|ref|YP_001732678.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|170682650|ref|YP_001746216.1| ribonuclease BN [Escherichia coli SMS-3-5]
gi|187732965|ref|YP_001882581.1| ribonuclease BN [Shigella boydii CDC 3083-94]
gi|188494355|ref|ZP_03001625.1| YihY family protein [Escherichia coli 53638]
gi|191166407|ref|ZP_03028238.1| tRNA-processing ribonuclease BN [Escherichia coli B7A]
gi|191173894|ref|ZP_03035414.1| tRNA-processing ribonuclease BN [Escherichia coli F11]
gi|193063932|ref|ZP_03045018.1| tRNA-processing ribonuclease BN [Escherichia coli E22]
gi|193067967|ref|ZP_03048932.1| tRNA-processing ribonuclease BN [Escherichia coli E110019]
gi|194433276|ref|ZP_03065557.1| tRNA-processing ribonuclease BN [Shigella dysenteriae 1012]
gi|194438282|ref|ZP_03070373.1| tRNA-processing ribonuclease BN [Escherichia coli 101-1]
gi|195937525|ref|ZP_03082907.1| ribonuclease BN [Escherichia coli O157:H7 str. EC4024]
gi|208807855|ref|ZP_03250192.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4206]
gi|208812015|ref|ZP_03253344.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4045]
gi|208820357|ref|ZP_03260677.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4042]
gi|209398243|ref|YP_002273403.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4115]
gi|209921360|ref|YP_002295444.1| ribonuclease BN [Escherichia coli SE11]
gi|217326271|ref|ZP_03442355.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
TW14588]
gi|218556446|ref|YP_002389360.1| ribonuclease BN [Escherichia coli IAI1]
gi|218692171|ref|YP_002400383.1| ribonuclease BN [Escherichia coli ED1a]
gi|218697598|ref|YP_002405265.1| ribonuclease BN [Escherichia coli 55989]
gi|218707513|ref|YP_002415032.1| ribonuclease BN [Escherichia coli UMN026]
gi|227885379|ref|ZP_04003184.1| ribonuclease BN [Escherichia coli 83972]
gi|237702915|ref|ZP_04533396.1| tRNA-processing ribonuclease BN [Escherichia sp. 3_2_53FAA]
gi|238902953|ref|YP_002928749.1| putative inner membrane protein [Escherichia coli BW2952]
gi|253775478|ref|YP_003038309.1| ribonuclease BN [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254039095|ref|ZP_04873145.1| tRNA-processing ribonuclease BN [Escherichia sp. 1_1_43]
gi|254163837|ref|YP_003046945.1| ribonuclease BN [Escherichia coli B str. REL606]
gi|254795880|ref|YP_003080717.1| ribonuclease BN [Escherichia coli O157:H7 str. TW14359]
gi|256021525|ref|ZP_05435390.1| ribonuclease BN [Shigella sp. D9]
gi|256026080|ref|ZP_05439945.1| ribonuclease BN [Escherichia sp. 4_1_40B]
gi|260846346|ref|YP_003224124.1| putative inner membrane protein [Escherichia coli O103:H2 str.
12009]
gi|260857716|ref|YP_003231607.1| putative inner membrane protein [Escherichia coli O26:H11 str.
11368]
gi|260870602|ref|YP_003237004.1| putative inner membrane protein [Escherichia coli O111:H- str.
11128]
gi|291285297|ref|YP_003502115.1| tRNA-processing ribonuclease BN [Escherichia coli O55:H7 str.
CB9615]
gi|293407508|ref|ZP_06651427.1| rbn [Escherichia coli FVEC1412]
gi|293413318|ref|ZP_06655979.1| conserved hypothetical protein [Escherichia coli B354]
gi|293417348|ref|ZP_06659972.1| rbn [Escherichia coli B185]
gi|293470196|ref|ZP_06664607.1| rbn [Escherichia coli B088]
gi|297520785|ref|ZP_06939171.1| ribonuclease BN [Escherichia coli OP50]
gi|298383251|ref|ZP_06992844.1| rbn [Escherichia coli FVEC1302]
gi|300819266|ref|ZP_07099466.1| YihY family protein [Escherichia coli MS 107-1]
gi|300823708|ref|ZP_07103834.1| YihY family protein [Escherichia coli MS 119-7]
gi|300896426|ref|ZP_07114958.1| YihY family protein [Escherichia coli MS 198-1]
gi|300906204|ref|ZP_07123916.1| YihY family protein [Escherichia coli MS 84-1]
gi|300919073|ref|ZP_07135615.1| YihY family protein [Escherichia coli MS 115-1]
gi|300925924|ref|ZP_07141759.1| YihY family protein [Escherichia coli MS 182-1]
gi|300938446|ref|ZP_07153189.1| YihY family protein [Escherichia coli MS 21-1]
gi|300948144|ref|ZP_07162276.1| YihY family protein [Escherichia coli MS 116-1]
gi|300957275|ref|ZP_07169503.1| YihY family protein [Escherichia coli MS 175-1]
gi|300976515|ref|ZP_07173498.1| YihY family protein [Escherichia coli MS 45-1]
gi|300985945|ref|ZP_07177651.1| YihY family protein [Escherichia coli MS 200-1]
gi|301023861|ref|ZP_07187593.1| YihY family protein [Escherichia coli MS 69-1]
gi|301046693|ref|ZP_07193819.1| YihY family protein [Escherichia coli MS 185-1]
gi|301303357|ref|ZP_07209481.1| YihY family protein [Escherichia coli MS 124-1]
gi|301328203|ref|ZP_07221331.1| YihY family protein [Escherichia coli MS 78-1]
gi|301648465|ref|ZP_07248194.1| YihY family protein [Escherichia coli MS 146-1]
gi|306813852|ref|ZP_07448028.1| ribonuclease BN [Escherichia coli NC101]
gi|307140581|ref|ZP_07499937.1| ribonuclease BN [Escherichia coli H736]
gi|307313992|ref|ZP_07593606.1| ribonuclease BN [Escherichia coli W]
gi|309783810|ref|ZP_07678455.1| YihY family protein [Shigella dysenteriae 1617]
gi|309796591|ref|ZP_07690997.1| YihY family protein [Escherichia coli MS 145-7]
gi|312971829|ref|ZP_07786003.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331644617|ref|ZP_08345736.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H736]
gi|331655572|ref|ZP_08356564.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli M718]
gi|331660435|ref|ZP_08361369.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA206]
gi|331665534|ref|ZP_08366432.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA143]
gi|331670730|ref|ZP_08371566.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA271]
gi|331675343|ref|ZP_08376093.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA280]
gi|331679995|ref|ZP_08380657.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H591]
gi|331685622|ref|ZP_08386205.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H299]
gi|332282764|ref|ZP_08395177.1| tRNA-processing ribonuclease BN [Shigella sp. D9]
gi|67471903|sp|P0A8K8|YIHY_ECOLI RecName: Full=UPF0761 membrane protein yihY
gi|67471904|sp|P0A8K9|YIHY_ECOL6 RecName: Full=UPF0761 membrane protein yihY
gi|67471905|sp|P0A8L0|YIHY_ECO57 RecName: Full=UPF0761 membrane protein yihY
gi|122421687|sp|Q1R432|YIHY_ECOUT RecName: Full=UPF0761 membrane protein yihY
gi|123047804|sp|Q0SZ72|YIHY_SHIF8 RecName: Full=UPF0761 membrane protein yihY
gi|123343373|sp|Q0TAH6|YIHY_ECOL5 RecName: Full=UPF0761 membrane protein yihY
gi|123561253|sp|Q32A56|YIHY_SHIDS RecName: Full=UPF0761 membrane protein yihY
gi|166918687|sp|A7ZU91|YIHY_ECO24 RecName: Full=UPF0761 membrane protein yihY
gi|166918688|sp|A8A6Y7|YIHY_ECOHS RecName: Full=UPF0761 membrane protein yihY
gi|189039569|sp|B1IVJ2|YIHY_ECOLC RecName: Full=UPF0761 membrane protein yihY
gi|226737440|sp|B5YZ23|YIHY_ECO5E RecName: Full=UPF0761 membrane protein yihY
gi|226737442|sp|B7M685|YIHY_ECO8A RecName: Full=UPF0761 membrane protein yihY
gi|226737443|sp|B1XB54|YIHY_ECODH RecName: Full=UPF0761 membrane protein yihY
gi|226737444|sp|B7NFI5|YIHY_ECOLU RecName: Full=UPF0761 membrane protein yihY
gi|226737445|sp|B6I4M3|YIHY_ECOSE RecName: Full=UPF0761 membrane protein yihY
gi|226737446|sp|B1LMS0|YIHY_ECOSM RecName: Full=UPF0761 membrane protein yihY
gi|226737459|sp|B2TVN0|YIHY_SHIB3 RecName: Full=UPF0761 membrane protein yihY
gi|254789779|sp|B7L9D9|YIHY_ECO55 RecName: Full=UPF0761 membrane protein yihY
gi|254789780|sp|B7N2M7|YIHY_ECO81 RecName: Full=UPF0761 membrane protein yihY
gi|259552135|sp|C5A054|YIHY_ECOBW RecName: Full=UPF0761 membrane protein yihY
gi|12518772|gb|AAG59076.1|AE005619_9 tRNA processing exoribonuclease BN [Escherichia coli O157:H7 str.
EDL933]
gi|26111079|gb|AAN83262.1|AE016770_62 Ribonuclease BN [Escherichia coli CFT073]
gi|304990|gb|AAB03019.1| ORF_o290 [Escherichia coli str. K-12 substr. MG1655]
gi|1790319|gb|AAD13448.1| predicted inner membrane protein [Escherichia coli str. K-12
substr. MG1655]
gi|13364285|dbj|BAB38232.1| tRNA processing exoribonuclease BN [Escherichia coli O157:H7 str.
Sakai]
gi|30043085|gb|AAP18807.1| tRNA processing exoribonuclease BN [Shigella flexneri 2a str.
2457T]
gi|81243089|gb|ABB63799.1| tRNA processing exoribonuclease BN [Shigella dysenteriae Sd197]
gi|85676173|dbj|BAE77423.1| tRNA processing exoribonuclease BN [Escherichia coli str. K12
substr. W3110]
gi|91075001|gb|ABE09882.1| tRNA processing exoribonuclease BN [Escherichia coli UTI89]
gi|110345816|gb|ABG72053.1| ribonuclease BN [Escherichia coli 536]
gi|110616976|gb|ABF05643.1| tRNA processing exoribonuclease BN [Shigella flexneri 5 str. 8401]
gi|157069036|gb|ABV08291.1| tRNA-processing ribonuclease BN [Escherichia coli HS]
gi|157076799|gb|ABV16507.1| tRNA-processing ribonuclease BN [Escherichia coli E24377A]
gi|169757030|gb|ACA79729.1| ribonuclease BN [Escherichia coli ATCC 8739]
gi|169891193|gb|ACB04900.1| predicted inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|170520368|gb|ACB18546.1| tRNA-processing ribonuclease BN [Escherichia coli SMS-3-5]
gi|187429957|gb|ACD09231.1| tRNA-processing ribonuclease BN [Shigella boydii CDC 3083-94]
gi|187769224|gb|EDU33068.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4196]
gi|188016749|gb|EDU54871.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4113]
gi|188489554|gb|EDU64657.1| YihY family protein [Escherichia coli 53638]
gi|189001480|gb|EDU70466.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4076]
gi|189357179|gb|EDU75598.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4401]
gi|189362765|gb|EDU81184.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4486]
gi|189367868|gb|EDU86284.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4501]
gi|189378076|gb|EDU96492.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC508]
gi|190903507|gb|EDV63225.1| tRNA-processing ribonuclease BN [Escherichia coli B7A]
gi|190905852|gb|EDV65471.1| tRNA-processing ribonuclease BN [Escherichia coli F11]
gi|192929397|gb|EDV83005.1| tRNA-processing ribonuclease BN [Escherichia coli E22]
gi|192958587|gb|EDV89025.1| tRNA-processing ribonuclease BN [Escherichia coli E110019]
gi|194418560|gb|EDX34648.1| tRNA-processing ribonuclease BN [Shigella dysenteriae 1012]
gi|194422719|gb|EDX38715.1| tRNA-processing ribonuclease BN [Escherichia coli 101-1]
gi|208727656|gb|EDZ77257.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4206]
gi|208733292|gb|EDZ81979.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4045]
gi|208740480|gb|EDZ88162.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4042]
gi|209159643|gb|ACI37076.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4115]
gi|209752628|gb|ACI74621.1| D-Tyr-tRNATyr deacylase [Escherichia coli]
gi|209752630|gb|ACI74622.1| D-Tyr-tRNATyr deacylase [Escherichia coli]
gi|209752632|gb|ACI74623.1| D-Tyr-tRNATyr deacylase [Escherichia coli]
gi|209752634|gb|ACI74624.1| D-Tyr-tRNATyr deacylase [Escherichia coli]
gi|209752636|gb|ACI74625.1| D-Tyr-tRNATyr deacylase [Escherichia coli]
gi|209914619|dbj|BAG79693.1| tRNA processing exoribonuclease BN [Escherichia coli SE11]
gi|217322492|gb|EEC30916.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
TW14588]
gi|218354330|emb|CAV01054.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|218363215|emb|CAR00857.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|218429735|emb|CAR10696.2| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|218434610|emb|CAR15541.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|222035599|emb|CAP78344.1| tRNA-processing ribonuclease BN [Escherichia coli LF82]
gi|226838531|gb|EEH70560.1| tRNA-processing ribonuclease BN [Escherichia sp. 1_1_43]
gi|226902852|gb|EEH89111.1| tRNA-processing ribonuclease BN [Escherichia sp. 3_2_53FAA]
gi|227837637|gb|EEJ48103.1| ribonuclease BN [Escherichia coli 83972]
gi|238862583|gb|ACR64581.1| predicted inner membrane protein [Escherichia coli BW2952]
gi|242379423|emb|CAQ34237.1| predicted inner membrane protein [Escherichia coli BL21(DE3)]
gi|253326522|gb|ACT31124.1| ribonuclease BN [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975738|gb|ACT41409.1| ribonuclease BN [Escherichia coli B str. REL606]
gi|253979894|gb|ACT45564.1| ribonuclease BN [Escherichia coli BL21(DE3)]
gi|254595280|gb|ACT74641.1| predicted inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|257756365|dbj|BAI27867.1| predicted inner membrane protein [Escherichia coli O26:H11 str.
11368]
gi|257761493|dbj|BAI32990.1| predicted inner membrane protein [Escherichia coli O103:H2 str.
12009]
gi|257766958|dbj|BAI38453.1| predicted inner membrane protein [Escherichia coli O111:H- str.
11128]
gi|260451278|gb|ACX41700.1| ribonuclease BN [Escherichia coli DH1]
gi|281603274|gb|ADA76258.1| tRNA-processing ribonuclease BN [Shigella flexneri 2002017]
gi|290765170|gb|ADD59131.1| tRNA-processing ribonuclease BN [Escherichia coli O55:H7 str.
CB9615]
gi|291321406|gb|EFE60845.1| rbn [Escherichia coli B088]
gi|291425425|gb|EFE98464.1| rbn [Escherichia coli FVEC1412]
gi|291430868|gb|EFF03864.1| rbn [Escherichia coli B185]
gi|291468066|gb|EFF10564.1| conserved hypothetical protein [Escherichia coli B354]
gi|294491225|gb|ADE89981.1| tRNA-processing ribonuclease BN [Escherichia coli IHE3034]
gi|298276285|gb|EFI17805.1| rbn [Escherichia coli FVEC1302]
gi|300301332|gb|EFJ57717.1| YihY family protein [Escherichia coli MS 185-1]
gi|300306481|gb|EFJ61001.1| YihY family protein [Escherichia coli MS 200-1]
gi|300315964|gb|EFJ65748.1| YihY family protein [Escherichia coli MS 175-1]
gi|300359699|gb|EFJ75569.1| YihY family protein [Escherichia coli MS 198-1]
gi|300396868|gb|EFJ80406.1| YihY family protein [Escherichia coli MS 69-1]
gi|300402006|gb|EFJ85544.1| YihY family protein [Escherichia coli MS 84-1]
gi|300410087|gb|EFJ93625.1| YihY family protein [Escherichia coli MS 45-1]
gi|300413812|gb|EFJ97122.1| YihY family protein [Escherichia coli MS 115-1]
gi|300418028|gb|EFK01339.1| YihY family protein [Escherichia coli MS 182-1]
gi|300452331|gb|EFK15951.1| YihY family protein [Escherichia coli MS 116-1]
gi|300456599|gb|EFK20092.1| YihY family protein [Escherichia coli MS 21-1]
gi|300523770|gb|EFK44839.1| YihY family protein [Escherichia coli MS 119-7]
gi|300528152|gb|EFK49214.1| YihY family protein [Escherichia coli MS 107-1]
gi|300841311|gb|EFK69071.1| YihY family protein [Escherichia coli MS 124-1]
gi|300845340|gb|EFK73100.1| YihY family protein [Escherichia coli MS 78-1]
gi|301073461|gb|EFK88267.1| YihY family protein [Escherichia coli MS 146-1]
gi|305852850|gb|EFM53297.1| ribonuclease BN [Escherichia coli NC101]
gi|306906309|gb|EFN36825.1| ribonuclease BN [Escherichia coli W]
gi|307556027|gb|ADN48802.1| tRNA processing ribonuclease BN [Escherichia coli ABU 83972]
gi|307628959|gb|ADN73263.1| ribonuclease BN [Escherichia coli UM146]
gi|308119747|gb|EFO57009.1| YihY family protein [Escherichia coli MS 145-7]
gi|308928181|gb|EFP73643.1| YihY family protein [Shigella dysenteriae 1617]
gi|309704312|emb|CBJ03661.1| tRNA-processing ribonuclease BN [Escherichia coli ETEC H10407]
gi|310334206|gb|EFQ00411.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|312948458|gb|ADR29285.1| ribonuclease BN [Escherichia coli O83:H1 str. NRG 857C]
gi|313647073|gb|EFS11528.1| hypothetical protein SF2457T_4439 [Shigella flexneri 2a str. 2457T]
gi|315138454|dbj|BAJ45613.1| tRNA-processing ribonuclease BN [Escherichia coli DH1]
gi|315254252|gb|EFU34220.1| YihY family protein [Escherichia coli MS 85-1]
gi|315289589|gb|EFU48982.1| YihY family protein [Escherichia coli MS 110-3]
gi|315292759|gb|EFU52111.1| YihY family protein [Escherichia coli MS 153-1]
gi|315300238|gb|EFU59475.1| YihY family protein [Escherichia coli MS 16-3]
gi|315618746|gb|EFU99330.1| tRNA-processing ribonuclease BN [Escherichia coli 3431]
gi|320176398|gb|EFW51453.1| Ribonuclease BN [Shigella dysenteriae CDC 74-1112]
gi|320182310|gb|EFW57211.1| Ribonuclease BN [Shigella boydii ATCC 9905]
gi|320191022|gb|EFW65672.1| Ribonuclease BN [Escherichia coli O157:H7 str. EC1212]
gi|320196892|gb|EFW71514.1| Ribonuclease BN [Escherichia coli WV_060327]
gi|320198915|gb|EFW73513.1| Ribonuclease BN [Escherichia coli EC4100B]
gi|320639225|gb|EFX08852.1| hypothetical protein ECO5101_06694 [Escherichia coli O157:H7 str.
G5101]
gi|320644613|gb|EFX13667.1| hypothetical protein ECO9389_05543 [Escherichia coli O157:H- str.
493-89]
gi|320649937|gb|EFX18445.1| hypothetical protein ECO2687_16032 [Escherichia coli O157:H- str. H
2687]
gi|320655243|gb|EFX23189.1| hypothetical protein ECO7815_15024 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660870|gb|EFX28316.1| hypothetical protein ECO5905_07501 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666030|gb|EFX33049.1| hypothetical protein ECOSU61_21657 [Escherichia coli O157:H7 str.
LSU-61]
gi|323155113|gb|EFZ41301.1| YihY family protein [Escherichia coli EPECa14]
gi|323161218|gb|EFZ47135.1| YihY family protein [Escherichia coli E128010]
gi|323174380|gb|EFZ60006.1| YihY family protein [Escherichia coli LT-68]
gi|323177896|gb|EFZ63480.1| tRNA-processing ribonuclease BN [Escherichia coli 1180]
gi|323182405|gb|EFZ67812.1| tRNA-processing ribonuclease BN [Escherichia coli 1357]
gi|323189693|gb|EFZ74972.1| tRNA-processing ribonuclease BN [Escherichia coli RN587/1]
gi|323380763|gb|ADX53031.1| ribonuclease BN [Escherichia coli KO11]
gi|323934374|gb|EGB30787.1| YihY family protein [Escherichia coli E1520]
gi|323939056|gb|EGB35273.1| YihY family protein [Escherichia coli E482]
gi|323943715|gb|EGB39813.1| YihY family protein [Escherichia coli H120]
gi|323954343|gb|EGB50128.1| YihY family protein [Escherichia coli H263]
gi|323959347|gb|EGB55008.1| YihY family protein [Escherichia coli H489]
gi|323964234|gb|EGB59717.1| YihY family protein [Escherichia coli M863]
gi|323969752|gb|EGB65035.1| YihY family protein [Escherichia coli TA007]
gi|323974289|gb|EGB69418.1| YihY family protein [Escherichia coli TW10509]
gi|324006834|gb|EGB76053.1| YihY family protein [Escherichia coli MS 57-2]
gi|324012555|gb|EGB81774.1| YihY family protein [Escherichia coli MS 60-1]
gi|324020468|gb|EGB89687.1| YihY family protein [Escherichia coli MS 117-3]
gi|324115620|gb|EGC09558.1| YihY family protein [Escherichia coli E1167]
gi|326338109|gb|EGD61939.1| Ribonuclease BN [Escherichia coli O157:H7 str. 1044]
gi|326342596|gb|EGD66369.1| Ribonuclease BN [Escherichia coli O157:H7 str. 1125]
gi|327250516|gb|EGE62224.1| tRNA-processing ribonuclease BN [Escherichia coli STEC_7v]
gi|331036079|gb|EGI08315.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H736]
gi|331046673|gb|EGI18758.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli M718]
gi|331052384|gb|EGI24421.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA206]
gi|331057219|gb|EGI29209.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA143]
gi|331061985|gb|EGI33908.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA271]
gi|331067403|gb|EGI38808.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA280]
gi|331072321|gb|EGI43654.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H591]
gi|331077093|gb|EGI48308.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H299]
gi|332084115|gb|EGI89320.1| tRNA-processing ribonuclease BN [Shigella boydii 5216-82]
gi|332085137|gb|EGI90315.1| tRNA-processing ribonuclease BN [Shigella dysenteriae 155-74]
gi|332105116|gb|EGJ08462.1| tRNA-processing ribonuclease BN [Shigella sp. D9]
gi|332345878|gb|AEE59212.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332751472|gb|EGJ81873.1| tRNA-processing ribonuclease BN [Shigella flexneri K-671]
gi|332751634|gb|EGJ82033.1| tRNA-processing ribonuclease BN [Shigella flexneri 4343-70]
gi|332752525|gb|EGJ82911.1| tRNA-processing ribonuclease BN [Shigella flexneri 2747-71]
gi|332764587|gb|EGJ94819.1| tRNA-processing ribonuclease BN [Shigella flexneri 2930-71]
gi|332997673|gb|EGK17285.1| tRNA-processing ribonuclease BN [Shigella flexneri VA-6]
gi|332998478|gb|EGK18076.1| tRNA-processing ribonuclease BN [Shigella flexneri K-272]
gi|332998557|gb|EGK18154.1| tRNA-processing ribonuclease BN [Shigella flexneri K-218]
gi|333013897|gb|EGK33259.1| tRNA-processing ribonuclease BN [Shigella flexneri K-304]
gi|333013974|gb|EGK33335.1| tRNA-processing ribonuclease BN [Shigella flexneri K-227]
Length = 290
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|323494559|ref|ZP_08099663.1| hypothetical protein VIBR0546_13332 [Vibrio brasiliensis LMG 20546]
gi|323311162|gb|EGA64322.1| hypothetical protein VIBR0546_13332 [Vibrio brasiliensis LMG 20546]
Length = 304
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 97/271 (35%), Gaps = 10/271 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWP 71
+ + A +++ LLS+ P + ++ + D V +
Sbjct: 15 RYLLTRMGHDRVNVNAGYLAYITLLSIVPMLTVLLSVLSSFAIFENAGDAIQDFVITHFV 74
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ +L+ +A + + + + + +LN +RV R
Sbjct: 75 PAAGDAVKGALLEFVAN-TGKMSAVGGAFLFVAALMLISNIDKNLNYIWRVKHKR----- 128
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALF 190
+ + + L + + A A +YV + ++N + L F
Sbjct: 129 --RAVFSFSMYWMVLTLGPILVGASIAATSYVTSLKILESEAISGLYNQLLRWLPFLLSF 186
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++L +P K +I + G I + + F YI F +Y +Y LA+I
Sbjct: 187 FAFVGLYLLVPNKKVRISHAMVGAIIAALLFEASKKGFAAYITQFPSYQLIYGALAAIPI 246
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
V++Y+ + ++GAE+ A++ +P
Sbjct: 247 LFVWVYLCWLIVLVGAEVTAALGEREQWSEP 277
>gi|290955032|ref|YP_003486214.1| hypothetical protein SCAB_4401 [Streptomyces scabiei 87.22]
gi|260644558|emb|CBG67643.1| putative membrane protein [Streptomyces scabiei 87.22]
Length = 314
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 105/267 (39%), Gaps = 5/267 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + +D A+ ++ A+L+V P ++ G + + V
Sbjct: 26 WPALRRTPVALWRDDVTDYAAALTYYAILAVLPAMLATVLAFGMIS-PDTAEEFVTHVAA 84
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + ++L + A +A + +S+ + R +L+R +RV + R
Sbjct: 85 YAPAGSGADLHAVLARMLGAGSTAWPLLAAGAASALWSASSYLAVFRRALHRMHRVADRR 144
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW-NGRIYAT 185
S + + LA + L+++ + + + LA L + +W R
Sbjct: 145 SPWR-KAHRIVLTALAQLGLLLVGSLTLLLSGPLAEALGRTLGLNSTAAWVWGLVRWPVL 203
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + ++ V PA LPG + W+V + F+ Y YS +Y L
Sbjct: 204 LCLVALLVVVVFHTGPAPARHSGRSLPGGVLAAALWLVVSAGFSSYASALGAYSRLYGSL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
A ++ LV+L++ + + GA+ A +
Sbjct: 264 AGVVVFLVWLWLSNLALLTGAQFAAEL 290
>gi|317050136|ref|YP_004117784.1| ribonuclease BN [Pantoea sp. At-9b]
gi|316951753|gb|ADU71228.1| ribonuclease BN [Pantoea sp. At-9b]
Length = 289
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 104/281 (37%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F + E++ A +++ +LL++ P I L +
Sbjct: 6 LRHSGHAFFLWVKLLWRRIDEDNMTTQAGNLAYVSLLALVPLIAVVFALFAAFPVFSEIS 65
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + +F + I + Q +A K + + A++ + + ++ +LN
Sbjct: 66 VQLKNFIFTNFVPAAGNTIQRYLEQFVANVNK-MTAVGAVSLIVTALLLMHSVDSALNVI 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R + R + + + +L L S + L+L +V + +I
Sbjct: 125 WRSDKKRPMVYSFAV-YWMILTLGPLLAGASLAISSYLLSLRWVSA-----AGVNSLIEQ 178
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L + ++ +P + L G + + + +G F Y+ F +Y
Sbjct: 179 VLRVFPLLLSILAFWLLYSIVPTRRVPGRDALVGAVVAGLLFELGKKGFALYVTMFPSYQ 238
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I +++Y +LGAE+ ++ Y K+
Sbjct: 239 LIYGVLAVIPILFLWVYWTWCIVLLGAEITVTLDDYRQLKQ 279
>gi|195940496|ref|ZP_03085878.1| ribonuclease BN [Escherichia coli O157:H7 str. EC4024]
Length = 293
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 102/270 (37%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ E++ +A +++ +LLS+ P + L V + VF +
Sbjct: 20 LKLLWHRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFSAFPMFADVSMQLRHFVFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I + I Q +A +K + + A + + ++ +LN +R ++R
Sbjct: 80 IPATGDVIQNYIEQFVANSSK-MTAVGACGLIVTALLLMYSIDSALNTIWRSKKVRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N ++ +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLCWATDLNSVIDNVLRIFPLILSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ +P + + G + + + +G F YI F +Y +Y LA I
Sbjct: 191 LSFWLLYSVVPTTRVPNRDAVVGALVAALLFELGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ ++ +Y KK
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGVYRELKK 280
>gi|332703580|ref|ZP_08423668.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
gi|332553729|gb|EGJ50773.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
Length = 333
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 60/284 (21%), Positives = 122/284 (42%), Gaps = 10/284 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
MR+ + ++ + F +++ + +A+ +S AL S+ P +V + + G+ V
Sbjct: 1 MRKLARELQALLLKTVYGFSDDNCFTLAAALSYYALFSLAPLLVILISALSLVAGSQDVV 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAY-FSSNGVEALRISLNR 118
V + V A I + Q + + ++ L ++ + L+ SLN
Sbjct: 61 NLVYEYVSEYLGSQAATTIRRLMEQAYQPSSSIIASLIGLGTLVVTATTLLANLQNSLNI 120
Query: 119 AYRVVEMRSW-----YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V + + + + RL S +LL + L++++ V + A Y+ ++ P
Sbjct: 121 VWGVAQAKKYGVLRMLLDRLNSLVLILLMGLLLLLLTVVQAVMTGAYGYLIQWLPVDTLA 180
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
LL I + LAL IGL+F LP A+ + G + T + +G +Y+
Sbjct: 181 LLDILQQVLSFLGLALLIGLVF--KVLPDARIVWRDVAVGSLVTALLLFLGKTAIGYYLG 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+T ++MY ++I+ L+++ + LGAE + Y
Sbjct: 239 RSAT-ASMYGPASAIILMLLWINYSSLILFLGAEFTQAWSELYG 281
>gi|258624619|ref|ZP_05719555.1| tRNA processing ribonuclease BN [Vibrio mimicus VM603]
gi|262166747|ref|ZP_06034484.1| ribonuclease BN [Vibrio mimicus VM223]
gi|258583083|gb|EEW07896.1| tRNA processing ribonuclease BN [Vibrio mimicus VM603]
gi|262026463|gb|EEY45131.1| ribonuclease BN [Vibrio mimicus VM223]
Length = 309
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 96/261 (36%), Gaps = 8/261 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWP 71
+ + A +++ LLS+ P + ++ VI D V +
Sbjct: 20 RYLLTRMKHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFSIFASAGDVIQDFVITHFV 79
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + +++ +A + + + + + +LN +RV R +
Sbjct: 80 PAAGEVVKTALVEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYIWRVQRKRRAVFS 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + +L LV S + +L + L + + F
Sbjct: 139 FSM-YWMILTLGPILVGASIAATSYITSLKILDN-----EALSGAYNLFLRWLPFVLSFC 192
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++L +P K ++ + G + + + + F YI F +Y +Y LA+I
Sbjct: 193 AFVGLYLLVPNKKVRLPHAMAGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIPIL 252
Query: 252 LVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 253 FVWVYLCWLIVLVGAEVTAAL 273
>gi|300712393|ref|YP_003738207.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299126076|gb|ADJ16415.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 356
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 84/261 (32%), Gaps = 15/261 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
EE+ MA I+ A +S+ P + +G + P
Sbjct: 15 VAREVSEENVTFMAGSIAYQAFVSLIPLLALLFLAVAVVGDQSLANEITGYTQSYLPPSA 74
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ I A G I A+ + + L + + Y V S+
Sbjct: 75 QTLLDGYIAGEAGSSAGGAGVIGAVTLLWGTLKIFRGLDTAFSEIYDTVADNSFLDQ--- 131
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
L+ + +++ V + P + I ++ L +
Sbjct: 132 -----LVDGLVVLLTIGGAVLGAVVATTAFAALPEVS----FIGLLNPLVLVVGLTVVFY 182
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG--LASIMTCL 252
++ P +LPGV+ + W + LF YI ST + +I+ L
Sbjct: 183 PMYFRFPDVDLSFREVLPGVVVAAVGWALLQALFQVYIGYAGGGSTS-GSDVIGAILLLL 241
Query: 253 VFLYMLGVFFILGAELNASMI 273
+LY G+ +LGA +NA +
Sbjct: 242 TWLYFSGLVLLLGAVVNAVIA 262
>gi|218551132|ref|YP_002384923.1| ribonuclease BN [Escherichia fergusonii ATCC 35469]
gi|226737447|sp|B7LVG3|YIHY_ESCF3 RecName: Full=UPF0761 membrane protein yihY
gi|218358673|emb|CAQ91327.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia fergusonii ATCC 35469]
gi|324111499|gb|EGC05480.1| YihY family protein [Escherichia fergusonii B253]
gi|325499413|gb|EGC97272.1| ribonuclease BN [Escherichia fergusonii ECD227]
Length = 290
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 101/280 (36%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHHTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQQYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNAIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R +R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRVRPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|325105576|ref|YP_004275230.1| ribonuclease BN [Pedobacter saltans DSM 12145]
gi|324974424|gb|ADY53408.1| ribonuclease BN [Pedobacter saltans DSM 12145]
Length = 317
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 54/282 (19%), Positives = 108/282 (38%), Gaps = 10/282 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
Y +F +I ++ F + G +++ +S + S+ P ++ +LAG + +
Sbjct: 6 SYIKTIFKLIIESFNSFNNDKGLKLSAALSYYTIFSLGPMLLVLLSLAGIFYEEEAIEGK 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAY 120
V D + G A I + + I+ + + GV ++ S+N +
Sbjct: 66 VFDEIVGFVGADAAILIQSVLKNLALSGKSTFTIITGVVTLILGATGVFIEIQDSINLIW 125
Query: 121 RVVE--MRSWYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
RV + W R +S V L++ + + + +F P L
Sbjct: 126 RVKAIPKKGWIKLIINRALSLSMVGALGFLLIVTLIINSLVTAFNDILSRFVP--EQTLF 183
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ I T + L I ++ LP A + S+ G IFT + +++G L YI +
Sbjct: 184 LFDYTNIGITFIVLVILFGIIYKVLPDATIRWRSVRSGAIFTSLLFMLGKYLIGLYIG-Y 242
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ ++Y +++ V++Y GAE Y
Sbjct: 243 ASVGSVYGAAGTVVVIAVWVYYSAAILFFGAEFTKVYAGYKG 284
>gi|218701414|ref|YP_002409043.1| ribonuclease BN [Escherichia coli IAI39]
gi|226737441|sp|B7NUY5|YIHY_ECO7I RecName: Full=UPF0761 membrane protein yihY
gi|218371400|emb|CAR19233.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
Length = 290
Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNAIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|319901760|ref|YP_004161488.1| tRNA-processing RNAse BN [Bacteroides helcogenes P 36-108]
gi|319416791|gb|ADV43902.1| tRNA-processing RNAse BN [Bacteroides helcogenes P 36-108]
Length = 439
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 101/262 (38%), Gaps = 6/262 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ IY I F ++ AS ++ S LL++ P + +A G + I F
Sbjct: 34 IIKTIYLCINRFTKDRIVNKASALTYSTLLAIVPILAILFAIARGFGFDNLMENQIISGF 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G P + + + L+ G+F + + + N + + I+ NR ++V + R
Sbjct: 94 GG-PTETTEMMLRFVDSYLSQTKSGVFIGVGLVMLLWSVLNLINNMEITFNRIWQVKKAR 152
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S Y F +LL + +V+ + + + + + F +I
Sbjct: 153 SMYRKITDYFSMLLLMPILIVVSGGLSIFMSTMVKNIEDFTLLAPLGKFMI----RLIPF 208
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + +++F+P K K L I + L+ V S Y+ +Y A
Sbjct: 209 VLTWCMFTALYVFMPNTKVKFSHALISGILAGTAHQAFQFLYISGQVWVSRYNAIYGSFA 268
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ L++L + + GAEL
Sbjct: 269 ALPLFLLWLQISWTICLFGAEL 290
>gi|194428664|ref|ZP_03061201.1| tRNA-processing ribonuclease BN [Escherichia coli B171]
gi|194413247|gb|EDX29532.1| tRNA-processing ribonuclease BN [Escherichia coli B171]
Length = 290
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 100/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRNAIVGAFVAALLFEAGKQGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|297199350|ref|ZP_06916747.1| ribonuclease BN [Streptomyces sviceus ATCC 29083]
gi|197715317|gb|EDY59351.1| ribonuclease BN [Streptomyces sviceus ATCC 29083]
Length = 321
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 81/274 (29%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ D+ F DG+ A ++ +L + P V LA + + +
Sbjct: 33 LRLLTDSFARFRYADGFTNARALAFQVVLGLVPCTVALVGLATSVHTEGVGRIIELTLGR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + + A ++ + + NR Y +
Sbjct: 93 IVPGASADIVKDAFDGTRRTAHGSVWSTLALWLGLGFALLNLASAMGQIERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + A + LV+ V VA V + G +
Sbjct: 153 RDRPFPRKYARGIVLAVAAGLPLVLGFVVLVAGEAVGDAVARSAGREGGGPRWWGVLDLP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ + + P + L G + WV L Y+ + +Y
Sbjct: 213 VGLALAWVASAVIFRWSPRRVQPGYTWLAFGSAVHLLLWVSATWLLALYVEESGAFGAVY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + V LG A +
Sbjct: 273 GPLTAFIALLLWANLTAVALFLGIAFAAQLEAAR 306
>gi|126736678|ref|ZP_01752417.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
gi|126713793|gb|EBA10665.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
Length = 188
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 6/180 (3%)
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI 156
S A + GV AL LN MR+ ++ + ++ V V +
Sbjct: 2 SIALALWSCRAGVGALIGGLNAIAGQR-MRNGIWQMAVALMLTVALVSLAIVALTVVVIV 60
Query: 157 PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVI 215
P+ LA++ P + ++ R + L GL ++ F PA S+ I G
Sbjct: 61 PIGLAFI----PVANSTAWLLEGIRWLVALGVLMTGLSLLYRFGPARIGSRGRWITVGAF 116
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ WV + ++Y+ F++Y+ +Y + +++ L++LY+ +LGA LN + Y
Sbjct: 117 AVVVLWVAASAGLSYYLTNFASYNEVYGSIGAVIGLLLWLYVSAYLILLGAALNVEVHGY 176
>gi|227539060|ref|ZP_03969109.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
gi|227241116|gb|EEI91131.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
Length = 320
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 10/267 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVV 66
F II + F+ ED ++ ++ + S+ P +V +LAG F G V +
Sbjct: 15 FFSIIKTSAMGFINEDCLKYSASLAYYTIFSIGPILVLIISLAGVFFGQDAIEGKVFTEM 74
Query: 67 FGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
G A+ I + I+ + L+ + +S + +++ ++ S+NR + V
Sbjct: 75 KGLVGPSAARQIQEVIMNLKLSGKSNLALVVSIITLLIGATSVFGDIQNSINRIWHVRAK 134
Query: 126 RS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RL+S V+ L++ V I ++++FP + LL N
Sbjct: 135 PKKGWVKVIKDRLLSSSLVISLGFLLMVTLVVNGVILAFTDRLQRYFPDITVHLLDAINF 194
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +FI + LP K + ++ G FT I +V+G + Y+ T T +
Sbjct: 195 --SISFGVIFILFGIIFRALPDVKIEWRTVRSGAFFTAILFVIGRFVIGLYLQTSGT-ES 251
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAE 267
Y SI+ L+++Y GA
Sbjct: 252 TYGAAGSIILVLLWVYYTAAILYFGAI 278
>gi|74314388|ref|YP_312807.1| ribonuclease BN [Shigella sonnei Ss046]
gi|123615669|sp|Q3YV90|YIHY_SHISS RecName: Full=UPF0761 membrane protein yihY
gi|73857865|gb|AAZ90572.1| tRNA processing exoribonuclease BN [Shigella sonnei Ss046]
gi|323167513|gb|EFZ53220.1| YihY family protein [Shigella sonnei 53G]
Length = 290
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLFSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|295095034|emb|CBK84124.1| tRNA-processing RNAse BN [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 293
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 102/270 (37%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ E++ +A +++ +LLS+ P + L V + VF +
Sbjct: 20 LKLLWHRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFSAFPMFADVSMQLRHFVFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I + I Q +A +K + + A + + ++ +LN +R ++R
Sbjct: 80 IPATGDVIQNYIEQFVANSSK-MTAVGACGLIVTALLLMYSIDSALNTIWRSKKVRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N ++ +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWATDLNSVIDNVLRIFPLILSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ +P + + G + + + +G F YI F +Y +Y LA I
Sbjct: 191 LSFWLLYSVVPTTRVPNRDAVVGALVAALLFELGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ ++ +Y KK
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGVYRELKK 280
>gi|197333895|ref|YP_002154869.1| tRNA-processing ribonuclease BN [Vibrio fischeri MJ11]
gi|197315385|gb|ACH64832.1| tRNA-processing ribonuclease BN [Vibrio fischeri MJ11]
Length = 316
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 109/275 (39%), Gaps = 12/275 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ I + + + + + A +++ LLS+ P I ++
Sbjct: 11 IKHKLRIGWSYLLFLKQRVIHDRLTVSAGYMAYITLLSLVPLITVLLSVLSQFPVFSGAG 70
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS-NGVEALRISLNR 118
+ V + + + + + ++ G T + +S + ++ SLN
Sbjct: 71 DTVQAFVIQNFVPAASDAVEASLKEFIS--NTGKMTAVGSGFLFVASVMLISSIDRSLNY 128
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV + R + S +++L L++ + + A +YV ++ +
Sbjct: 129 IWRVKKKRRPMYS--FSLYWMILTLGPLLVGASLA-----ATSYVTSLKIMDDEIVSSFY 181
Query: 179 NGRI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + ++ F + ++L +P K ++ L G + + V F YI F +
Sbjct: 182 RTLLGWLPIILSFSAFVGLYLLVPNKKVRVTHALIGAMSAGCLFEFSKVGFAQYITQFPS 241
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y +Y LA++ V++Y+ + ++GAE+ AS+
Sbjct: 242 YQVIYGALAAVPILFVWVYLCWIIVLIGAEITASL 276
>gi|153802917|ref|ZP_01957503.1| YihY family protein [Vibrio cholerae MZO-3]
gi|254285936|ref|ZP_04960898.1| YihY family protein [Vibrio cholerae AM-19226]
gi|124121530|gb|EAY40273.1| YihY family protein [Vibrio cholerae MZO-3]
gi|150424118|gb|EDN16057.1| YihY family protein [Vibrio cholerae AM-19226]
Length = 309
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 102/274 (37%), Gaps = 10/274 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
VI D V + + + +++ +A + + + + + +LN
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALVEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYI 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + L + + A A +Y+ L ++N
Sbjct: 127 WRVPQKR-------RAVFSFSMYWMILTLGPILVGASIAATSYITSLKILDNEALSGVYN 179
Query: 180 -GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 180 LFLRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 240 QLIYGALAAIPILFVWVYLCWLIVLVGAEVTAAL 273
>gi|298208650|ref|YP_003716829.1| hypothetical protein CA2559_10418 [Croceibacter atlanticus
HTCC2559]
gi|83848573|gb|EAP86442.1| hypothetical protein CA2559_10418 [Croceibacter atlanticus
HTCC2559]
Length = 323
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 55/285 (19%), Positives = 109/285 (38%), Gaps = 9/285 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
M F +I + + D +A ++ I+ L S+ ++ +AG F G
Sbjct: 1 MTVNFKTFLSLIKSTYKRWDNIDPFAKSAIIAYYTLFSLPSLLMIVVTIAGKFFGRDAVQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNR 118
+ + + A+ I I + + + A F ++ L+ ++N
Sbjct: 61 GRITSEIGSLIGDGAAEAIEGMIANAALNDSSAFTVVFGVGALLFGATGAFFQLKRTMNF 120
Query: 119 AYRVVEMRSWYIT----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V E + R+ISFG +L+ + L++ + I YV + P + +
Sbjct: 121 IWNVKEKDQTILRMVIDRVISFGMILVVGLMLLVSLVISATIGAISEYVEQIAPNITAIA 180
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
L I N + + + + LP K K L G T + +++G L Y
Sbjct: 181 LDIGNFLF--SYIFITALFASIFKILPDVKLKWRVTLLGASVTTLLFLIGEYLLGFYFGH 238
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S +++Y G +S++ L+++Y + GA +Y K
Sbjct: 239 -SEPASVYGGASSVVLILLWVYYTCLIVFFGACFTVEYALYKNEK 282
>gi|73540945|ref|YP_295465.1| tRNA-processing RNAse BN [Ralstonia eutropha JMP134]
gi|72118358|gb|AAZ60621.1| tRNA-processing RNAse BN [Ralstonia eutropha JMP134]
Length = 444
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 113/281 (40%), Gaps = 12/281 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + A+ E +A+ ++ + LSV P + L + + I+
Sbjct: 15 LQKLRALSRYALRRAGEGRLPQVAASLTFTTFLSVVPVLTVAFALLAAFPVFREFRSDIE 74
Query: 65 --VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P +++ I+ + Q + A+GL + S + + +LN +RV
Sbjct: 75 TFLFQNLIPGNVSESISRYLGQ-FSKSARGLTAMGLGGLMLTSVLTMLTVEDALNGIWRV 133
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R + R++ F VL L+ S + + +GN+ + +
Sbjct: 134 KQRRPF-AQRVLMFWAVLTFGPVLIGASLSVSS-----YLISVSAGYVGNMPIGLGLLVS 187
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + F++ +P A + + + I++ F ++I TY+ +Y
Sbjct: 188 ATPIVLSALAFAFLYTAVPNAYVEWRDAIAAGLVAAIAFEFAKRGFGYFITHIPTYTAVY 247
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIY---YWRKK 280
A++ L+++Y+ + +LGA + A++ + +WR++
Sbjct: 248 GTFAALPIFLLWIYLSWLVTLLGATIAANLPVVRQGHWRRR 288
>gi|116623093|ref|YP_825249.1| putative ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
gi|116226255|gb|ABJ84964.1| putative ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
Length = 379
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 104/274 (37%), Gaps = 14/274 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTV 62
+ D++ + + D AM + ++ +L+S+ P ++ + GA +
Sbjct: 40 HMKRHLDLLKETYRQWSSHDAPAMGAAVAFYSLVSLAPLVILLVGICALVFGAAGAQAQL 99
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYR 121
++ G + A+ I + L ++ L ++GV LR +LN+ +
Sbjct: 100 LEQFRGMVGDEGARAIRTVLTSAQKPATGVLASLFGLITLLLGASGVFIELRAALNKLWD 159
Query: 122 VVEM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
S+ R +S G VL L++ AI L + KFF +LG L
Sbjct: 160 AESGSIASGIWSFIKDRFLSIGMVLAIGFLLLVSL----AISAGLGALGKFFGSLGFLPP 215
Query: 176 IIWNGRIYATMLALFIG-LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++W + L + G + F+P + I G + T + + +G Y+
Sbjct: 216 VVWEAVNFVVSLGVVAGLFALILRFVPNIRLPWHDIGLGAVLTAVLFTIGKTAIGIYLGK 275
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S Y S++ +V++Y F GA
Sbjct: 276 AGVGSA-YGAAGSLVLIIVWVYYSAQIFFFGAMF 308
>gi|260774771|ref|ZP_05883674.1| ribonuclease BN [Vibrio coralliilyticus ATCC BAA-450]
gi|260609333|gb|EEX35485.1| ribonuclease BN [Vibrio coralliilyticus ATCC BAA-450]
Length = 304
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 96/261 (36%), Gaps = 8/261 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWP 71
+ + A +++ LLS+ P + ++ VI D V +
Sbjct: 15 RYLLTRMGHDRVNVNAGYLAYITLLSIVPMLTVLLSVLSSFSVFANAGDVIQDFVITHFV 74
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ +L+ +A + + L + + + +LN +RV R +
Sbjct: 75 PAAGDAVKQALLEFVAN-TGKMTAVGGLFLFVAALMLISNIDKNLNYIWRVEHKRRAVFS 133
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + VL LV S + +L + + L+ W L F
Sbjct: 134 FSM-YWMVLTLGPILVGASIAATSYVTSLKIIDSEAISGAYDFLLRW-----LPFLLSFF 187
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ +++ +P K + + G I + + F YI F +Y +Y LA+I
Sbjct: 188 AFMGLYILVPNKKVYVSHAVVGAIVAALLFEASKKGFAAYITQFPSYQLIYGALAAIPIL 247
Query: 252 LVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 248 FVWVYLCWLIVLIGAEVTAAL 268
>gi|170735928|ref|YP_001777188.1| ribonuclease BN [Burkholderia cenocepacia MC0-3]
gi|169818116|gb|ACA92698.1| ribonuclease BN [Burkholderia cenocepacia MC0-3]
Length = 308
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 104/265 (39%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSDRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR----- 126
A I + A GL T+ + AA +S +L +L+ + E R
Sbjct: 83 AAASIQTIVQNAHRAGERGGLATLISFAALAIGASATFASLSAALSVIWPATESRWSSML 142
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RLISFG VL + L++ + A+ ++ + +++ + + +
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFIGTWLLGDSPYVVVTNLVQFFVGI 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + FLP A+ G I + I + G LF Y+ T ++ +
Sbjct: 199 AVLAAAFASLMKFLPDARVAWRDAAIGGIVSAILFSGGKKLFALYLAHAGT-ASAFGAAG 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY + +LGAE A+
Sbjct: 258 SFAVLLMWLYFSAIVLLLGAEFAAA 282
>gi|293610867|ref|ZP_06693167.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827211|gb|EFF85576.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 415
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 103/282 (36%), Gaps = 8/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFVLYVFKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D+ L + L I L + + ++ NR
Sbjct: 69 QQLQHLIYSNFLPKSTIAF--DKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E RS + + + ++ ++ +FV + ++ + F +
Sbjct: 127 IWRVKETRSGIMG-FMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLDGAFL- 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +G ++ +P + + + + + + F+ + F++Y
Sbjct: 185 --LWLISFVLTILGFFILYWTIPNRTVPVYAAGIAACLSAVLFEILKNFFSFVMSNFTSY 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 243 EIIYGAFAAVPIFLLWIFLSWNIILLGVEVSFALTAFHSGKE 284
>gi|120403444|ref|YP_953273.1| ribonuclease BN [Mycobacterium vanbaalenii PYR-1]
gi|119956262|gb|ABM13267.1| ribonuclease BN [Mycobacterium vanbaalenii PYR-1]
Length = 344
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 103/279 (36%), Gaps = 13/279 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISL----SALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ I A+ ++ ++ ++ + S + + A +A G V
Sbjct: 21 HHIRHITIRALSKSWDDSIFSESAQAAFWCALSLPPLLLGMLGSLAYVAPLFGPDTLVTI 80
Query: 62 VIDVVFGAW----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+V A P V+++ I + ++ + ++ + + + S+ + A S+
Sbjct: 81 QSQLVSLAGRFFSPNVVSEIIEPTVRDIVRGARGEVVSLGFVISLWAGSSAISAFVDSIT 140
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
A+ +R R + G ++ V ++ + P V +F P + L
Sbjct: 141 EAHDQTPLRHPVRQRFYALGLYVVMLVGAIVAAPFLALGP---RKVAEFIPDSWDSALQF 197
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+AL + + ++ +L G + +++ Y+ ++
Sbjct: 198 --AYYPVLFVALVVSVNLLYRVSLPKPLPSHRLLLGSVLAAAVFLIATWGLRVYLTWITS 255
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y LA+ + L+F + LG ++GAELNA++ +
Sbjct: 256 TGYTYGALATPIAFLLFAFFLGFAIMIGAELNAAIEEEF 294
>gi|94310076|ref|YP_583286.1| tRNA-processing RNAse BN [Cupriavidus metallidurans CH34]
gi|93353928|gb|ABF08017.1| ribonuclease BN [Cupriavidus metallidurans CH34]
Length = 447
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 110/282 (39%), Gaps = 11/282 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
V + A+ E+ +++ ++ + +L+V P + L + I
Sbjct: 14 NLQKVRALARYALRRAGEDRLPQVSASLTFTTVLAVVPVLTVAFALLAAFPVFRDFRGQI 73
Query: 64 D--VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + P + + A+GL + S + + +LN +R
Sbjct: 74 EMFLFQNLIPGGNISDSVSRYIGQFSRSARGLTALGLAGLMVTSVLTMLTVEDALNAIWR 133
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R + R++ F VL L+ S + ++++ +GNL +
Sbjct: 134 VRRRRPF-AQRVLVFWAVLTLGPVLIGASLSVSSYLMSVSM-----GYVGNLPFGVGFVI 187
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + F+++ +P A + + I +++ V F ++I TY+ +
Sbjct: 188 SLVPVLLSALAFAFLYMAVPNAYVEWRDAIVAGIVAAVAFEVAKRGFGYFITHIPTYTAV 247
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY---YWRKK 280
Y A + L+++Y+ + +LGA + A++ + +WR++
Sbjct: 248 YGTFAVLPLFLLWMYVSWLVTLLGATIAANLPVIREGHWRRR 289
>gi|167752880|ref|ZP_02425007.1| hypothetical protein ALIPUT_01142 [Alistipes putredinis DSM 17216]
gi|167659949|gb|EDS04079.1| hypothetical protein ALIPUT_01142 [Alistipes putredinis DSM 17216]
Length = 456
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 100/263 (38%), Gaps = 15/263 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ +++ + D ++ ++ L+S+ P + + G + +ID ++
Sbjct: 34 YKLLFYTARGLIAHDTIVRSAALTFYTLISIVPILALVFAVVKGFG---LLDGLIDDLYA 90
Query: 69 AWPE--VIAKPITDEILQVLAVPAKGLFTISALAAAYFS-SNGVEALRISLNRAYRVVEM 125
+P+ + + + + LA GL + ++ +++ ++ + N + V
Sbjct: 91 LFPQNVEVLDYMVEFARKALANTQGGLIALVSVVTLFWAVIRVFGSVESAFNNIWEVQSS 150
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ L Y+++A V ++ L + LG LL + +
Sbjct: 151 RNIARQYL---NYIVIAMVAPILWLVASTMGGYLLRFFDAGNTFLGILLSKL------SA 201
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ ++ ++ +P K S I +++ + + ++Y+ +Y
Sbjct: 202 LVIIWGSFTLIYAVVPNTKVLWRSAFMAGIVAGTVFMLFQWGYLYLQGWMTSYNAIYGSF 261
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + + G EL
Sbjct: 262 AALPLFLLWLQISWEILLFGGEL 284
>gi|256375638|ref|YP_003099298.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
gi|255919941|gb|ACU35452.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
Length = 431
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 111/275 (40%), Gaps = 13/275 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDV 65
++ I E + ++ A+ + +LS P ++ G++G + V V D
Sbjct: 23 LRLVARTITKAWEGNIFSEAAEAAFWQVLSFPPLLLGLLGSIGYVGEWFGPEVVQAVRDK 82
Query: 66 VFGAWP-----EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +V+ IT + Q+L V + ++ L + + S+ + + ++ A+
Sbjct: 83 IVSTCRTIFSGDVVNGVITPTVDQILTVGKGEIVSVGFLISLWAGSSAMASFVDAVTVAH 142
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+R R+ + +++ V L+I V P + +F P + W
Sbjct: 143 GQYGVRHEVWQRIFALLLYVVSLVLLIIGLPVLALGP---DVLPRFLPDRWQAVAEAWLS 199
Query: 181 RIYATML--ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
Y ++ L + L ++ K + PG + +++ +V YI +T
Sbjct: 200 AFYYPVIGVLLVLALATLYKLALPRKLPWHRLAPGAALAMVVFILSSVGLRLYIRWITTT 259
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y LA+ + L+F++ +G+ +GA N+++
Sbjct: 260 GYTYGALATPIAFLLFVFFIGLAITIGAYFNSAIQ 294
>gi|297196436|ref|ZP_06913834.1| ribonuclease BN [Streptomyces pristinaespiralis ATCC 25486]
gi|197722262|gb|EDY66170.1| ribonuclease BN [Streptomyces pristinaespiralis ATCC 25486]
Length = 317
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 85/274 (31%), Gaps = 7/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D+ DA F DG++ + ++ L+V PF + LA L TV V+
Sbjct: 33 RDLFVDAFVRFRYADGFSHSRAVAFQMALAVVPFTIALVGLAATLHTESVGRTVELVLTR 92
Query: 69 AWPEVIAKPITDEILQV-----LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
P ++ I D + + + A + + + NR Y V
Sbjct: 93 IAPGASSRLIEDALAEGRRSAGANTGGAVAMWLGLGFAVVSLVSAMAQVERGANRIYGVE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + S + A + V VA F W +I
Sbjct: 153 RDRPFTAKYGRSLFLSVAAGAPMAFGFLVLVAGDTIAQAAVDAFGGGTLPGWWHW-LQIP 211
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ + + P + L G W+ L Y+ ++ +Y
Sbjct: 212 LGITMAWVASAVIFRWSPRRVQPGYTWLAFGSAIHLALWIAATWLLALYVERSGSFGAVY 271
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + M L++ + GV LG A +
Sbjct: 272 GPLTAFMALLLWANITGVALFLGLAFAAQLEAAR 305
>gi|239814676|ref|YP_002943586.1| ribonuclease BN [Variovorax paradoxus S110]
gi|239801253|gb|ACS18320.1| ribonuclease BN [Variovorax paradoxus S110]
Length = 403
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 99/258 (38%), Gaps = 11/258 (4%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + +++ PF L + + ++ P+ I
Sbjct: 28 ERFREDRLGLTASSLTFTTTIAMVPFFTVALALFTVFPMFAKLQGRLQRWLIESLIPDNI 87
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q + A GL + + + + +LN +RV R +
Sbjct: 88 ARQVLGYLNQ-FSSKAGGLGIAGLVVLLITAIALILTIDKTLNNIWRVRSPRPFAQR--- 143
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ A++TL + + + G++L + ++ + L G+
Sbjct: 144 --VLIYWAAITLGPLILAVSLSTTSYVFAASRDVVGGSILKLFFDT---FEFVLLAAGMA 198
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G F + + + +Y+ TYS +Y A++ LV+
Sbjct: 199 SLYHYVPNTNVRWSHAWAGGFFVAAAIEIAKRVLGYYLSLVPTYSVLYGAFATVPILLVW 258
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 259 IYVAWVIVLLGAVIAAYL 276
>gi|288559219|sp|B5FFD1|Y098_VIBFM RecName: Full=UPF0761 membrane protein VFMJ11_0098
Length = 310
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 109/275 (39%), Gaps = 12/275 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ I + + + + + A +++ LLS+ P I ++
Sbjct: 5 IKHKLRIGWSYLLFLKQRVIHDRLTVSAGYMAYITLLSLVPLITVLLSVLSQFPVFSGAG 64
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS-NGVEALRISLNR 118
+ V + + + + + ++ G T + +S + ++ SLN
Sbjct: 65 DTVQAFVIQNFVPAASDAVEASLKEFIS--NTGKMTAVGSGFLFVASVMLISSIDRSLNY 122
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV + R + S +++L L++ + + A +YV ++ +
Sbjct: 123 IWRVKKKRRPMYS--FSLYWMILTLGPLLVGASLA-----ATSYVTSLKIMDDEIVSSFY 175
Query: 179 NGRI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + ++ F + ++L +P K ++ L G + + V F YI F +
Sbjct: 176 RTLLGWLPIILSFSAFVGLYLLVPNKKVRVTHALIGAMSAGCLFEFSKVGFAQYITQFPS 235
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y +Y LA++ V++Y+ + ++GAE+ AS+
Sbjct: 236 YQVIYGALAAVPILFVWVYLCWIIVLIGAEITASL 270
>gi|218560956|ref|YP_002393869.1| ribonuclease BN [Escherichia coli S88]
gi|226736461|sp|B7MI17|YIHY_ECO45 RecName: Full=UPF0761 membrane protein yihY
gi|218367725|emb|CAR05514.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
Length = 290
Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 101/280 (36%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + +L L S A L+L + +L +I N
Sbjct: 129 RSKRARPKIYSFAV-YWMILTLGPLLAGASLAISAYLLSLRWA-------SDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAEKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|296171840|ref|ZP_06852939.1| ribonuclease BN [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295893924|gb|EFG73693.1| ribonuclease BN [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 330
Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 48/283 (16%), Positives = 111/283 (39%), Gaps = 13/283 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSA-------LLSVFPFIVFGANLAGFLGAHQF 58
++ + + ++ ++ ++ + LL + + + A L G
Sbjct: 11 HHIWRLSVRTLAKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVAPLFGPDTLTAI 70
Query: 59 VPTVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
++I + + P V+ + I I V A + ++ L + + S+ + A ++
Sbjct: 71 EKSIISAIRSFFSPSVVNEIIEPTIRDVTANARGEVVSVGFLISMWAGSSAISAYVDAVV 130
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
A+ +R RL + ++ V +V + V V P V + P +L ++
Sbjct: 131 EAHDQTPLRHPVRQRLFALFLYVVMLVFVVCAAPVLVVGP---RKVSEHIPY--DLANVL 185
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G A +L L +G++ ++ +L G + +++ + Y+ ++
Sbjct: 186 RYGYYPALILGLLVGVVILYRVALPEPLPTHRLLFGAVLATAVFLIATLGLRVYLGWITS 245
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA+ + L+F + G +LGAE NA++ + K
Sbjct: 246 TGYTYGALATPIAFLLFAFFGGFAVMLGAEFNAAIQEEFPAPK 288
>gi|229524719|ref|ZP_04414124.1| ribonuclease BN [Vibrio cholerae bv. albensis VL426]
gi|229338300|gb|EEO03317.1| ribonuclease BN [Vibrio cholerae bv. albensis VL426]
Length = 309
Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 102/274 (37%), Gaps = 10/274 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
VI D V + + + +++ +A + + + + + +LN
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYI 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + L + + A A +Y+ L ++N
Sbjct: 127 WRVQQKR-------RAVFSFSMYWMILTLGPILVGASIAATSYITSLKVLDNEALSGVYN 179
Query: 180 -GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 180 LFLRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 240 QLIYGALAAIPILFVWVYLCWLIVLVGAEVTAAL 273
>gi|167762332|ref|ZP_02434459.1| hypothetical protein BACSTE_00686 [Bacteroides stercoris ATCC
43183]
gi|167699975|gb|EDS16554.1| hypothetical protein BACSTE_00686 [Bacteroides stercoris ATCC
43183]
Length = 439
Score = 108 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 104/265 (39%), Gaps = 6/265 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + + I
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNKASALTYSTLLAIVPILAIVFAIARGFGFDNLMESQIV 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV 123
FG P + I + L+ G+F + + + N + + I+ NR ++V
Sbjct: 91 QGFGG-PSETTEVIFQFVNSYLSQTKNGIFIGVGLIMLLWTVLNLINNMEITFNRIWQVK 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RS Y F +LL + LV+ + + + L V F +I
Sbjct: 150 KARSMYRKITDYFSMLLLIPLLLVVSGGLSIFMSTMLKNVTDFTLLAPIGKFLI----RL 205
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ ++ +++F+P K K+ L I + L+ + S Y+ +Y
Sbjct: 206 IPFVLTWVMFTALYVFMPNTKVKLKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYG 265
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + + GAEL
Sbjct: 266 SFAALPMFLLWLQISWTICLFGAEL 290
>gi|134098374|ref|YP_001104035.1| ribonuclease BN [Saccharopolyspora erythraea NRRL 2338]
gi|291006924|ref|ZP_06564897.1| ribonuclease BN [Saccharopolyspora erythraea NRRL 2338]
gi|133910997|emb|CAM01110.1| ribonuclease BN [Saccharopolyspora erythraea NRRL 2338]
Length = 404
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 110/276 (39%), Gaps = 15/276 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+++ + ++ ++ ++ + LS+ P ++ GF+ F P VID V
Sbjct: 24 LRLVWRTVTKAWWDNIFSESAAAAFWQTLSMPPLLLGLLGSIGFIADW-FGPAVIDAVHA 82
Query: 69 AW---------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V+ + I + +L + ++ L + + S+ + +L S+ A
Sbjct: 83 NILGFSRTVFSGNVVDQIIAPTVGDILTKGRTEIVSVGFLLSLWAGSSALASLVDSITLA 142
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLII 177
Y +R R + L++ V VI V P ++ + P ++ +I
Sbjct: 143 YNQYMVRHSVWQRTFALLLYLVSLVLAVIGLPVIALGP---DWLVRVVPQEFQDDVAWLI 199
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
AT + L + L ++ K LPG + + ++ ++ YI ++
Sbjct: 200 QVFYYPATGVLLVLALATLYKVSLPRKLPWHRGLPGALLAMLVFLCSSIGMRLYIAWVTS 259
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y LA+ + L+F + +G+ I+GA+ N ++
Sbjct: 260 TGYTYGALATPIAFLLFAFFIGMAIIIGAQFNNAIE 295
>gi|326316310|ref|YP_004233982.1| ribonuclease BN [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373146|gb|ADX45415.1| ribonuclease BN [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 421
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + LL++ PF + + + T + +V P+ I
Sbjct: 31 ERFREDRLGLTASSLTFTTLLALVPFFTVALAIFTAFPIFRTLQTGLQRWLVDSLVPDSI 90
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ + + Q A A GL + + + +LN +RV +R + + +
Sbjct: 91 SRQVLGYLTQ-FAAKASGLGVAGFSILLATALALILTIDRTLNNIWRVPRLRP--LGQRV 147
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ ++ LV+ + + + +A + R AL + ++++ L L G
Sbjct: 148 LIYWAVITLGPLVLAASLALTTSVASSASRGLEGALPDSARLLFDS---IEFLLLAGGTA 204
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + + G +F + V + YI + TYS +Y A++ LV+
Sbjct: 205 ALYRYVPNTQVRWRHAWSGGVFVSVGIEVAKKVLGLYIASVPTYSVLYGAFATLPILLVW 264
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 265 IYVAWVIVLLGAVVAAYL 282
>gi|254381748|ref|ZP_04997112.1| ribonuclease BN [Streptomyces sp. Mg1]
gi|194340657|gb|EDX21623.1| ribonuclease BN [Streptomyces sp. Mg1]
Length = 317
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 93/276 (33%), Gaps = 4/276 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDV 65
+ + D+ F DG++ + ++L +LS+ P + L+ L G + I
Sbjct: 33 WSLARDSFIRFRYADGFSHSRALALQTVLSIVPLAIAAIGLSSVLHTEGVGRVAELTISR 92
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + E + + + L + + + + NR Y
Sbjct: 93 ITSGPSQQMVDEALRESRRHAGDGGQAALWLGLLFSLVNVTTSLCQVERGANRIYGNERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + LA + L + + V + + R
Sbjct: 153 RPFLLKYSRGLVMAALAGLPLGLSFVLTVLGSHLTHAFAEVYHFTPATTRAWDLLRWPVG 212
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + P + L G + + W+V + Y+ S+++++Y
Sbjct: 213 VLLAVLATSAIFRLSPRRAQPGYTWLAFGAVVYLVLWLVATGALSLYVGASSSFTSVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++IM+ L++ Y+ + LG A + K
Sbjct: 273 LSAIMSLLLWSYLTSLALFLGLSFAAQLEAVRAGTK 308
>gi|119491069|ref|ZP_01623227.1| Ribonuclease BN [Lyngbya sp. PCC 8106]
gi|119453614|gb|EAW34774.1| Ribonuclease BN [Lyngbya sp. PCC 8106]
Length = 290
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 50/282 (17%), Positives = 107/282 (37%), Gaps = 11/282 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
F +F ++ + + + E+ +A+ ++ + S+ P ++ +AG G ++
Sbjct: 3 FKKIFRLLKETFKEWQEDKSSRLAAALAYYTVFSLAPLLIIVIAIAGAIFGEEAARGEIV 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRV 122
+ G + A I + I + +I ++ ++GV A L+ SLN + V
Sbjct: 63 GQIQGLVGKDGATVIEEAIQNADRPQISSIASIFSIIFLLIGASGVFAQLQESLNEIWNV 122
Query: 123 VEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ R++SF VL L++ + I Y P + L I+
Sbjct: 123 KAQPKNGIAGFIRKRILSFSAVLGIGFLLLVSLVLSAVISGISNYFSDLIPGVDFLWQIL 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + ++ FLP AK + + G + T + + +G Y+ +
Sbjct: 183 N---FVVSFGVITLLFALMYKFLPDAKIQWSDVWIGSLITALLFTIGKFALGLYLGR-GS 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + Y S++ L ++Y GAE Y +
Sbjct: 239 FGSTYGAAGSLVIILAWVYYSAQILFFGAEFTQVYARKYGSR 280
>gi|153825509|ref|ZP_01978176.1| YihY family protein [Vibrio cholerae MZO-2]
gi|229513669|ref|ZP_04403133.1| ribonuclease BN [Vibrio cholerae TMA 21]
gi|229527333|ref|ZP_04416725.1| ribonuclease BN [Vibrio cholerae 12129(1)]
gi|254225457|ref|ZP_04919068.1| YihY family protein [Vibrio cholerae V51]
gi|297581582|ref|ZP_06943505.1| yihY family protein [Vibrio cholerae RC385]
gi|125622091|gb|EAZ50414.1| YihY family protein [Vibrio cholerae V51]
gi|149740794|gb|EDM54885.1| YihY family protein [Vibrio cholerae MZO-2]
gi|229334965|gb|EEO00450.1| ribonuclease BN [Vibrio cholerae 12129(1)]
gi|229349546|gb|EEO14502.1| ribonuclease BN [Vibrio cholerae TMA 21]
gi|297534420|gb|EFH73258.1| yihY family protein [Vibrio cholerae RC385]
Length = 309
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 102/274 (37%), Gaps = 10/274 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
VI D V + + + +++ +A + + + + + +LN
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYI 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + L + + A A +Y+ L ++N
Sbjct: 127 WRVQQKR-------RAVFSFSMYWMILTLGPILVGASIAATSYITSLKILDNEALSGVYN 179
Query: 180 -GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 180 LFLRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 240 QLIYGALAAIPILFVWVYLCWLIVLVGAEVTAAL 273
>gi|269126031|ref|YP_003299401.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
gi|268310989|gb|ACY97363.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
Length = 300
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 104/276 (37%), Gaps = 14/276 (5%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I + ++ +A+ + ALLS+ P ++ + G L TV D+
Sbjct: 14 IAWRLVKGTAVAGFRHRVTGLAAEAAFFALLSLPPLVIGLISTMGHLRGALAGETVADIR 73
Query: 67 FGAWP--------EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ +T I +V+ L ++S L + + S ++
Sbjct: 74 AWLIRQAHKILAGPAVDDVVTPLIDEVIRGGGVDLISVSFLLSLWAGSRATNVYVDTITI 133
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY + +R TRL +F L+ V++ + VA P + A LL
Sbjct: 134 AYGLSGLRGVIRTRLRAFTLYLIGLAVAVVVIPLLVAGPALVRQALPVGEAFVRLLY--- 190
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + L ++ ++ + +PG + W++G+V Y+ +
Sbjct: 191 ---WPVVVTLSIMFLATLYHMSVPVRTSWLRTVPGAVLALAIWILGSVALRVYLAGSLSG 247
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+++ L + + + +LY+ + ++GA LNA +
Sbjct: 248 VSVHGSLGAPIAVMAWLYVTALAVLIGAMLNAEIDR 283
>gi|37678387|ref|NP_932996.1| ribonuclease BN [Vibrio vulnificus YJ016]
gi|37197126|dbj|BAC92967.1| ribonuclease BN [Vibrio vulnificus YJ016]
Length = 317
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 102/271 (37%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
+ I + A +++ LLS+ P + ++ + V +V+ +
Sbjct: 26 FVRYLIARMNHDRINVNAGYLAYITLLSIVPMLTVLLSILSKFSVFENVGSVLQSFIINN 85
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + +A + + A + + + +LN +RV + R
Sbjct: 86 FVPASGDAVHAALQEFIAN-TGKMTAVGAAFLFVAALMLISNIDKNLNYIWRVKKKR--- 141
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLA 188
+ + + L + + A A +Y+ + +++ + +
Sbjct: 142 ----RAVFSFSMYWMVLTLGPILVGASIAATSYITSLRLLDSEAISTVYDQLLRWLPFIL 197
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++L +P K + + G + + + + F YI F +Y +Y LA+I
Sbjct: 198 SSSAFVGLYLLVPNKKVQFSHAVVGAMIAAVLFELSKKGFAAYITQFPSYQLIYGALAAI 257
Query: 249 MTCLVFLYMLGVFFILGAELNASM-IIYYWR 278
V++Y+ + ++GAE+ A++ +WR
Sbjct: 258 PILFVWVYLCWLIVLIGAEVTAALGEREHWR 288
>gi|229521815|ref|ZP_04411233.1| ribonuclease BN [Vibrio cholerae TM 11079-80]
gi|229341409|gb|EEO06413.1| ribonuclease BN [Vibrio cholerae TM 11079-80]
Length = 309
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 101/274 (36%), Gaps = 10/274 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLHFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
VI D V + + + +++ +A + + + + + +LN
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYI 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + L + + A A +Y+ L ++N
Sbjct: 127 WRVQQKR-------RAVFSFSMYWMILTLGPILVGASIAATSYITSLKILDNEALSGVYN 179
Query: 180 -GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 180 LFLRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 240 QLIYGALAAIPILFVWVYLCWLIVLVGAEVTAAL 273
>gi|39931647|sp|Q7MQ07|Y203_VIBVY RecName: Full=UPF0761 membrane protein VV0203
Length = 313
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 102/271 (37%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
+ I + A +++ LLS+ P + ++ + V +V+ +
Sbjct: 22 FVRYLIARMNHDRINVNAGYLAYITLLSIVPMLTVLLSILSKFSVFENVGSVLQSFIINN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + +A + + A + + + +LN +RV + R
Sbjct: 82 FVPASGDAVHAALQEFIAN-TGKMTAVGAAFLFVAALMLISNIDKNLNYIWRVKKKR--- 137
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLA 188
+ + + L + + A A +Y+ + +++ + +
Sbjct: 138 ----RAVFSFSMYWMVLTLGPILVGASIAATSYITSLRLLDSEAISTVYDQLLRWLPFIL 193
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++L +P K + + G + + + + F YI F +Y +Y LA+I
Sbjct: 194 SSSAFVGLYLLVPNKKVQFSHAVVGAMIAAVLFELSKKGFAAYITQFPSYQLIYGALAAI 253
Query: 249 MTCLVFLYMLGVFFILGAELNASM-IIYYWR 278
V++Y+ + ++GAE+ A++ +WR
Sbjct: 254 PILFVWVYLCWLIVLIGAEVTAALGEREHWR 284
>gi|262402026|ref|ZP_06078591.1| ribonuclease BN [Vibrio sp. RC586]
gi|262351998|gb|EEZ01129.1| ribonuclease BN [Vibrio sp. RC586]
Length = 309
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 96/261 (36%), Gaps = 8/261 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWP 71
+ + A +++ LLS+ P + ++ V VI D V +
Sbjct: 20 RYLLIRMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFSIFANVGDVIQDFVITHFV 79
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + +++ +A + + + + + +LN +RV R +
Sbjct: 80 PAAGEVVKTTLMEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYIWRVQRKRRAVFS 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + +L LV S + +L + L + + +
Sbjct: 139 FSM-YWMILTLGPILVGASIAATSYITSLKILDN-----EALSGAYNLFLRWLPFVLSYC 192
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++L +P K + + G + + + + F YI F +Y +Y LA+I
Sbjct: 193 AFVGLYLLVPNKKVHLNHAMAGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIPIL 252
Query: 252 LVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 253 FVWVYLCWLIVLVGAEVTAAL 273
>gi|206562871|ref|YP_002233634.1| putative ribonuclease [Burkholderia cenocepacia J2315]
gi|198038911|emb|CAR54873.1| putative ribonuclease [Burkholderia cenocepacia J2315]
Length = 317
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 104/265 (39%), Gaps = 13/265 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSDRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR----- 126
A I + A G+ T+ + AA +S +L +L+ + E R
Sbjct: 83 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLSAALSVIWPATESRWSSML 142
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
RLISFG VL + L++ + A+ ++ + +++ + + +
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFIGTWLLGNSPYVVVTNVVQFFVGI 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + FLP A+ G I + I + G LF Y+ T ++ +
Sbjct: 199 AVLAAAFASLMKFLPDARVAWRDAAIGGIVSAILFSGGKKLFALYLAHAGT-ASAFGAAG 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY + +LGAE A+
Sbjct: 258 SFAVLLMWLYFSAIVLLLGAEFAAA 282
>gi|194291449|ref|YP_002007356.1| ribonuclease bn [Cupriavidus taiwanensis LMG 19424]
gi|193225353|emb|CAQ71297.1| Ribonuclease BN [Cupriavidus taiwanensis LMG 19424]
Length = 339
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 58/283 (20%), Positives = 114/283 (40%), Gaps = 12/283 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVID 64
++ ++ D + +V++ +M + ++ + S+ P ++ ++AG G V+
Sbjct: 13 RALYGLLRDTVNAWVDDYAPSMGAALAYYTVFSIAPLLLIVISVAGVVFGHDAARGEVVA 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVV 123
+ G AK I +L V A L + + + V A L+ +L+R + V
Sbjct: 73 QLQGLLGPEGAKTIEAMLLAVSKPAASALTAVVGVVVLLVGATTVFAELQSALDRIWEVP 132
Query: 124 EMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
E R + RL+SFG +L LV+ + AI P G LI
Sbjct: 133 ERRKTSGIFALLRARLLSFGMILGIGFLLVVSLLLSAAISALNRLWG---PLFGAEELIA 189
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+++ + + ++ +P AK + + G T + + +G + YI S
Sbjct: 190 HVLDTVVSLVLITVVFAMIYKIMPRAKVRWPDVWLGAAVTALLFTLGKFVIGLYIGK-SG 248
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ Y S++ L+++Y F+LGAE Y ++
Sbjct: 249 VANGYGAAGSLVVLLLWVYYSAQIFLLGAEFTWQYARRYGSRR 291
>gi|284923988|emb|CBG37087.1| tRNA-processing ribonuclease BN [Escherichia coli 042]
Length = 290
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFVLYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|330444867|ref|ZP_08308522.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489177|dbj|GAA03019.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 302
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 108/271 (39%), Gaps = 10/271 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ D I+ + A ++ LLS+ P I + + + +
Sbjct: 9 RIRLMVDYFTYLIQRVNHDRLTVTAGSMAYVTLLSLVPLITVVISALSAVPVFAGLGEQL 68
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYR 121
+ V + + + + ++ G T +AA + + + ++ SLN +R
Sbjct: 69 QNFVIENFVPAAGAVVKTYLNEFVS--NAGKMTAVGIAALFVVAMMLISSIDTSLNYIWR 126
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R W I+ S +++L +++ S + V+ L + + L ++
Sbjct: 127 IKKKRRWIIS--FSIYWMILTLGPILLGSSIAVSSYLGSLALLEH----QALHGLLQQSL 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + + ++L +P K L G + I + + F Y+ F +Y +
Sbjct: 181 RWFPSLMSSLAFLLLYLLVPNCKVTFRHALIGGLSASILFELSKKGFAIYLAHFHSYQMI 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y LA+I V++Y+ +LGAE+ AS+
Sbjct: 241 YGALAAIPILFVWIYLCWCIVLLGAEITASL 271
>gi|262199043|ref|YP_003270252.1| ribonuclease BN [Haliangium ochraceum DSM 14365]
gi|262082390|gb|ACY18359.1| ribonuclease BN [Haliangium ochraceum DSM 14365]
Length = 499
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 97/253 (38%), Gaps = 5/253 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPTVIDVVFGAWPEV 73
I +E+ A+ ++ LLS+ P + G L F G + + +++
Sbjct: 57 TIHSLFDEELLRRAASLTYYTLLSLVPLLAVGFALFEAFGGLSKLKEPLKELIVDTVAVG 116
Query: 74 IAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + Q + G + + L Y + + + + NR + + R R
Sbjct: 117 RQDEIGTWLNQFIDNVNAGAIAGVGVLVLFYSAIGLLTNIESAFNRIWGIERDRP-MHMR 175
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ ++ + L+ +S F A + ++ L L + ++L
Sbjct: 176 FAIYWCIVTLAPPLLGVSISFSARLQSSSFASSVLDWLPFGLGNLVVVLSSTATVSLAFV 235
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L F+ +P K K+ L G I T + W V L+ +I YS +Y L+++ +
Sbjct: 236 LSFI--IVPNTKVKVKYALLGGITTGVLWNVTKALYIWFIAGSVKYSAIYGALSALPLLM 293
Query: 253 VFLYMLGVFFILG 265
++LY+ + + G
Sbjct: 294 MWLYLSWIILLFG 306
>gi|220935818|ref|YP_002514717.1| ribonuclease BN [Thioalkalivibrio sp. HL-EbGR7]
gi|219997128|gb|ACL73730.1| ribonuclease BN [Thioalkalivibrio sp. HL-EbGR7]
Length = 439
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 101/258 (39%), Gaps = 2/258 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
I + E A + + LLS+ P + ++ GAH + ++ +
Sbjct: 33 LRIAWGIGREVTEGQLTLRAMSLVYTTLLSMVPLLALSFSVLKAFGAHNQLEPLLLSLLE 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + I V + L I + Y V+ + + N +R+ R
Sbjct: 93 PLGPQGVEVAENVIGFVDNMRVGVLGFIGLIFLIYTVIALVQKIESAFNYTWRINGTRG- 151
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R ++ V+L LV+ + A +A + +++ + L + L
Sbjct: 152 LAQRFSNYLSVILVGPVLVVSALGITASIMATSVMQQAME-VQLLGEAVQLAGRMVPYLL 210
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ +FV++F+P + K++ L G + + W +F + + Y+ +Y+ A +
Sbjct: 211 IMGAFMFVYVFVPNTRVKLLPALVGAVVAGLLWQSTGWIFAAMMAGSTRYAAIYSSFAIM 270
Query: 249 MTCLVFLYMLGVFFILGA 266
+ L+++Y+ + ++GA
Sbjct: 271 IMLLIWIYLSWLILLIGA 288
>gi|78358104|ref|YP_389553.1| ribonuclease BN [Desulfovibrio desulfuricans subsp. desulfuricans
str. G20]
gi|78220509|gb|ABB39858.1| tRNA-processing RNAse BN [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 473
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 106/267 (39%), Gaps = 4/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R V +Y + FV + AS ++ + +LS+ P + +++ LG
Sbjct: 41 RRGILGVLRWLYLVVHGFVADQCLLRASALTYTTVLSIVPTLAVAFSISKGLGIQNT--E 98
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I V+ +T + V K L + LA + + + + N +
Sbjct: 99 FIRVLLMRIAAGREDTVTQILAYVDNTNVKTLGAVGLLALFVTVGSLMGTIEKAFNSIWG 158
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R+ + R + + + +V+ + ++ L + + +G +
Sbjct: 159 VARGRTLW--RKFTDFFSVTLVCPIVMAAAFSFSVSLRHETLVQKLLNVGIVSYAYVAFL 216
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + + L F+++F+P + + S L G + + W + + Y + + Y+ +
Sbjct: 217 KMVPFLMIALMLFFIYVFIPNTRVRFGSALLGGLVAGLLWTLAEGAYVGYQIGAARYNAI 276
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y G A + L+++Y+ V +LGAE+
Sbjct: 277 YGGFAQLPLFLIWVYVTWVIVLLGAEV 303
>gi|256822852|ref|YP_003146815.1| ribonuclease BN [Kangiella koreensis DSM 16069]
gi|288559224|sp|C7RCQ5|Y1635_KANKD RecName: Full=UPF0761 membrane protein Kkor_1635
gi|256796391|gb|ACV27047.1| ribonuclease BN [Kangiella koreensis DSM 16069]
Length = 397
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 107/269 (39%), Gaps = 13/269 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + + I F ++ AMA+ ++LS +L++ P + +L + + V
Sbjct: 1 MEKRWKWLKAFIKFVFIQFNQKQTSAMAAELTLSNMLALVPLMTVAVSLMAVFPSFEGVN 60
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
T + ++F + + + + ++ +K L I S + ++ S+N
Sbjct: 61 TQVQALIFDNLMPETGLAVQEHLNEYVS-KSKNLSAIGLGFLIVTSLLLMRSIDRSINAL 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ R +LA ++ M+ + +A LA + P + +L I+
Sbjct: 120 WETPTQRKGIHK--------ILAYWAMLTMAPILIAASLAASSYFATLPIVSDLSGILTF 171
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G + + + +++ +P + + L + T I + F ++ FS+Y
Sbjct: 172 G---LPFILIVLAFSALYMVVPYTQVRFYKALIAAVITAILFEAAKYGFAIFVTKFSSYE 228
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y + +I +++Y+ +LG +
Sbjct: 229 LIYGAITAIPIFFLWVYLSWSILLLGVIV 257
>gi|27364333|ref|NP_759861.1| hypothetical protein VV1_0885 [Vibrio vulnificus CMCP6]
gi|320157725|ref|YP_004190104.1| ribonuclease BN [Vibrio vulnificus MO6-24/O]
gi|32699637|sp|Q8DDS2|Y885_VIBVU RecName: Full=UPF0761 membrane protein VV1_0885
gi|27360451|gb|AAO09388.1| Ribonuclease BN [Vibrio vulnificus CMCP6]
gi|319933037|gb|ADV87901.1| ribonuclease BN [Vibrio vulnificus MO6-24/O]
Length = 313
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 102/271 (37%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
+ I + A +++ LLS+ P + ++ + V +V+ +
Sbjct: 22 FVRYLIARMNHDRINVNAGYLAYITLLSIVPMLTVLLSILSKFSVFENVGSVLQSFIINN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + +A + + A + + + +LN +RV + R
Sbjct: 82 FVPASGDAVHAALQEFIAN-TGKMTAVGAAFLFVAALMLISNIDKNLNYIWRVKKKR--- 137
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLA 188
+ + + L + + A A +Y+ + +++ + +
Sbjct: 138 ----RAVFSFSMYWMVLTLGPILVGASIAATSYITSLRLLDSEAISTVYDQLLRWLPFIL 193
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++L +P K + + G + + + + F YI F +Y +Y LA+I
Sbjct: 194 SSSAFVGLYLLVPNKKVQFSHAVVGAMIAAVLFELSKKGFAAYITQFPSYQLIYGALAAI 253
Query: 249 MTCLVFLYMLGVFFILGAELNASM-IIYYWR 278
V++Y+ + ++GAE+ A++ +WR
Sbjct: 254 PILFVWVYLCWLIVLIGAEVTAALGEREHWR 284
>gi|91781294|ref|YP_556501.1| ribonuclease BN [Burkholderia xenovorans LB400]
gi|91693954|gb|ABE37151.1| Ribonuclease BN [Burkholderia xenovorans LB400]
Length = 311
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 99/277 (35%), Gaps = 7/277 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFG 68
+ + D + F M + I+ + S+ P ++ +AG F G + V G
Sbjct: 21 NAMMDLAQRFSSHRCTMMGASIAFYSAFSLAPTLLIVLAVAGWFFGKEAARGELFAQVKG 80
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A + D + G+ +S L +S +L +L+ + + RS
Sbjct: 81 ILGSDAAAAMQDIVGHAHYAGGSGIAALVSVLLLIVGASATFTSLNTALDVVFE-AQTRS 139
Query: 128 WYITRLISFGY---VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ + L + V + + A+ + ++ + A
Sbjct: 140 GIAGMALLLRARLLSFGLVMGLGFLMVVSLVLDAAIQFAGHAVFGNSPVIAFALVLQSIA 199
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L G + +LP A + L G + I + G LF Y+ T + +
Sbjct: 200 GLVVLTAGFAALIKWLPDAPVRFRHALVGAFVSAILFTAGHHLFGFYLSHAGTANA-FGA 258
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S+ +++LY + F+LGAE A++ +P
Sbjct: 259 AGSLAVLMMWLYFSALVFLLGAETTAAIRRRSAAVQP 295
>gi|319424695|gb|ADV52769.1| ribonuclease BN [Shewanella putrefaciens 200]
Length = 294
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 109/276 (39%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWRFLQHLRLRLVEDQINIRAGHLAYVTLLSLVPLVAVTMSMLSAFPVFKGIR 69
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEAFVYENFLPAAGDTVQIYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + + + F + L +
Sbjct: 129 WRTKEKRSVVVAFSMYWMVITLGPVLVGASLVATSYVVSLKLFEDETFSGVVPLFIER-- 186
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G + + + +G F Y+ F +Y
Sbjct: 187 ----LPMLFSVAAFLLLYMVVPNQKVKFLHALLGALVAALLFELGKKAFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|59710707|ref|YP_203483.1| ribonuclease BN [Vibrio fischeri ES114]
gi|67460602|sp|Q5E8Q1|Y100_VIBF1 RecName: Full=UPF0761 membrane protein VF_0100
gi|59478808|gb|AAW84595.1| predicted inner membrane protein [Vibrio fischeri ES114]
Length = 310
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 109/275 (39%), Gaps = 12/275 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ I + + + + + A +++ LLS+ P I ++
Sbjct: 5 IKHKLRIGWSYLLFLKQRVIHDRLTVSAGYMAYITLLSLVPLITVLLSVLSQFPVFSGAG 64
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS-NGVEALRISLNR 118
+ V + + + + + ++ G T + +S + ++ SLN
Sbjct: 65 ETVQAFVIQNFVPAASDAVEASLKEFIS--NTGKMTAVGSGFLFVASVMLISSIDRSLNY 122
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV + R + S +++L L++ + + A +YV ++ +
Sbjct: 123 IWRVKKKRRPMYS--FSLYWMILTLGPLLVGASLA-----ATSYVTSLKIMDDEIVSSFY 175
Query: 179 NGRI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + ++ F + ++L +P K ++ L G + + V F YI F +
Sbjct: 176 RTLLGWLPIILSFSAFVGLYLLVPNKKVRVTHALIGAMSAGCLFEFSKVGFAQYITQFPS 235
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y +Y LA++ V++Y+ + ++GAE+ AS+
Sbjct: 236 YQVIYGALAAVPILFVWVYLCWIIVLIGAEITASL 270
>gi|218460097|ref|ZP_03500188.1| ribonuclease BN [Rhizobium etli Kim 5]
Length = 179
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS LI + L A V+M + +PL L+Y+ + + ++ +
Sbjct: 1 DEKRSLVRLNLIGLCFTLCAVFFAVLMVALVGVMPLVLSYL--WLDQFKEQMALLLRWPL 58
Query: 183 YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++A + + V+ F P+ + +++ + G T ++W ++ F+ Y+ F+ Y+
Sbjct: 59 LLLVVA--VAVTLVYRFGPSREPARVRWMTWGAALTTVTWAAMSLGFSFYLEHFANYNAT 116
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y L +++ LV++++ V I+GAELNA +
Sbjct: 117 YGALGALIGFLVWIWLSVVILIIGAELNAELE 148
>gi|308188680|ref|YP_003932811.1| tRNA processing exoribonuclease BN [Pantoea vagans C9-1]
gi|308059190|gb|ADO11362.1| tRNA processing exoribonuclease BN [Pantoea vagans C9-1]
Length = 289
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 99/277 (35%), Gaps = 8/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI- 63
+ + + E+ A +++ +LL++ P I L + +
Sbjct: 10 LHAFWLWLKLLWKRIDEDGMTTQAGNLAYVSLLALVPLIAVVFALFAAFPVFSDISVQLK 69
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
VF + + Q +A + + + A+ + + ++ +LN +R
Sbjct: 70 QFVFNNLMPAAGNTLQRYLEQFVANVNR-MTAVGAVGLIVTALLLMHSVDTALNTIWRSN 128
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + + + +L L S + L+L ++ + ++
Sbjct: 129 KKRPMVYSFAV-YWMILTLGPLLAGASLAISSYLLSLRWINA-----TGVTSLVDQMLRI 182
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L ++ ++ +P + L G + + +G F Y+ F +Y +Y
Sbjct: 183 FPLLLSWLAFWLLYSIVPTQRVPPRDALIGALVAGALFELGKKGFALYVTMFPSYQLIYG 242
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I +++Y +LGAE+ ++ Y K+
Sbjct: 243 VLAVIPILFLWVYWTWCIVLLGAEITVALADYRQLKQ 279
>gi|241765077|ref|ZP_04763069.1| ribonuclease BN [Acidovorax delafieldii 2AN]
gi|241365314|gb|EER60136.1| ribonuclease BN [Acidovorax delafieldii 2AN]
Length = 416
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 107/264 (40%), Gaps = 21/264 (7%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + +L++ PF+ + + V+ +V P+ I
Sbjct: 33 ERFREDRLGLTASSLTFTTVLALVPFVTVALAVFTAFPIFGKLQGVLQRWLVDSLVPDSI 92
Query: 75 AKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW----- 128
++ + + Q A ++ G+ +S L + + + +LN +RV +R
Sbjct: 93 SRQVLGYLTQFAAQASRLGVAGVSVL--LVTALALILTIDRTLNNIWRVRRLRPLGQRVL 150
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I+ G V+L + +L + S+V A + V L + +
Sbjct: 151 IYWAAITLGPVVLGA-SLALTSYVMSASGGLVRAVPDGVRLLFDSIE----------FFV 199
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L G+ ++ ++P K G +F + + + Y+ TYS +Y A++
Sbjct: 200 LAAGMAALYHYVPNTPVKWQHAWAGGLFVAVCIELAKKVLAIYLGKVPTYSVVYGTFATL 259
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
LV++Y+ V +LGA + A +
Sbjct: 260 PILLVWIYVAWVIVLLGAVVTAYL 283
>gi|260771961|ref|ZP_05880878.1| ribonuclease BN [Vibrio metschnikovii CIP 69.14]
gi|260612828|gb|EEX38030.1| ribonuclease BN [Vibrio metschnikovii CIP 69.14]
Length = 307
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 102/279 (36%), Gaps = 9/279 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI- 63
F + + A +++ LLS+ P + ++ V +I
Sbjct: 7 FKQSVRFVRYLFNRMNHDRININAGYLAYITLLSLVPMLTVLLSILSSFAIFDNVGEIIQ 66
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ V + +++ +LQ +A + + + + + ++N +RV
Sbjct: 67 EFVITHFVPAAGDAVSNALLQFVAN-TGKMTAVGGAFLFIAALMLISNIDKNMNFIWRVR 125
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + + +L LV S + +L V +
Sbjct: 126 NKRRVVFSFSM-YWMILTLGPILVGTSIAVTSYVTSLKLVES-----EAFSGVFRLFLSR 179
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L F + +++ +P K +++ L G + + + F YI F +Y +Y
Sbjct: 180 LPFLLSFFAFVGLYVLVPNKKVRLVHALSGAFVAALLFELSKKAFAAYITQFPSYQLIYG 239
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASM-IIYYWRKKP 281
LA+I V++Y+ + ++GAE A++ W+++P
Sbjct: 240 ALAAIPILFVWVYLCWLIVLIGAEFTAALGESEQWKREP 278
>gi|332638354|ref|ZP_08417217.1| integral membrane protein [Weissella cibaria KACC 11862]
Length = 313
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 102/246 (41%), Gaps = 7/246 (2%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ LLS+ P ++ +AG +G + + ++ P+ I +
Sbjct: 24 LSRANLNMVGPTITYYTLLSLVPVLMSVGAIAGLVGIN--AQELNSMLREQLPKNIMSIL 81
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
I VL+ G+ + S + + +S+ + +R + N + V E S +TR+ SF +
Sbjct: 82 GPIITSVLSGG-VGILSFSIVITIWGASSVLAVIRKAFNAVHDVPERVSGMLTRVFSFLW 140
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+++ +T ++ +P +A + P L L W + L++ + +
Sbjct: 141 LMVILLTAGVLMGASAMMPAIIAALPFDMPWLDKLAKQSW----LFALFGLWVLMCVFNF 196
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
LPA + +++ G + + F+ Y Y L S++ +V+L ++
Sbjct: 197 ALPAKRLPWKALVAGSGIEVLLLLALNAGFSFYAQFAVKSVGFYQSLGSLLVLMVYLNLV 256
Query: 259 GVFFIL 264
G ++
Sbjct: 257 GTIMVV 262
>gi|300781637|ref|ZP_07091491.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300533344|gb|EFK54405.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 400
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 104/281 (37%), Gaps = 18/281 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+I + F + ++ + ++ P ++ +L + + V+
Sbjct: 57 VIARTVLDFGPIALMDRGATLTYFTITAMAPTLLAFYSLVTLMFPSDKDDLREFMGGVIE 116
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISA--LAAAYFSSNGVEALRISLNRAYRVVEM 125
PE + + D +L V P + I L + + SS V A S N Y E
Sbjct: 117 DTVPEELREQALDLLLNVAGTPEQSTVAIIISLLVSLFSSSAYVRAFSRSCNVIYTRTEG 176
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA----------YVRKFFPALGNLLL 175
RS +T L +G +L + VIM V + ++ L + +
Sbjct: 177 RSLPVTWLTMWGITVLMVLGGVIMVAGVVLRTSIVDAVLGPIAEPLRLQGVVDYLNQIFI 236
Query: 176 IIWNG-RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
+WN R +LA + ++ F P + + + G + + LF ++
Sbjct: 237 PVWNWLRYPVVILAAIALVSCLYYFAPNVRPGRFRLLTVGSALALVVIGLLWALFNWFVS 296
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
F + Y S++ LV ++ + + +LG +L+A ++
Sbjct: 297 NFG-LQSAYGAFGSVLAMLVMVWAMNIVLLLGVKLDAEILR 336
>gi|54025740|ref|YP_119982.1| hypothetical protein nfa37700 [Nocardia farcinica IFM 10152]
gi|54017248|dbj|BAD58618.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 374
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 79/207 (38%), Gaps = 1/207 (0%)
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
V+++ I + VL + ++ + + + S+ + ++ A+ + R R
Sbjct: 116 VVSELIQPTVTDVLGRGRGAVVSVGFVLSLWAGSSAMATFVDAIVEAHDQQDARHPVWQR 175
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + + V V + + P + + L ++ + A L L +G
Sbjct: 176 VFALLLYVQFLVAAVFILPLVALGPSLIGRILPGA-WREPGLRLVDSFYYPAVGLLLIVG 234
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L ++ + G + + ++ + Y+ + Y LA+ + L
Sbjct: 235 LTTLYKAALHRSLPWHRLFGGALVAGVFFMAASEGLRRYLSWVTATGVSYGALATPIAFL 294
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
+F + LG ILGAE NA++ ++ +
Sbjct: 295 LFTFFLGFAVILGAEFNATVQEFWPAR 321
>gi|261856109|ref|YP_003263392.1| ribonuclease BN [Halothiobacillus neapolitanus c2]
gi|261836578|gb|ACX96345.1| ribonuclease BN [Halothiobacillus neapolitanus c2]
Length = 472
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/251 (17%), Positives = 96/251 (38%), Gaps = 4/251 (1%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ + A +S LLS+ P + ++ G+ Q + + + A
Sbjct: 42 REAFKGNLQLNAMSLSYITLLSLVPLLAVSFSVLKAFGSDQVIEPFLTTLLAPL-GSSAD 100
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVEMRSWYITRLIS 135
+T +IL + G+ +A +F+ ++ + N + V ++R TR
Sbjct: 101 GLTAQILTFVGNIKVGVLGAVGIAMLFFTVVTLMQKIESVFNGIWHVQQLRQ-ITTRFPM 159
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ VL+ LV+ + A L+ +V + + + F
Sbjct: 160 YLSVLMVGPVLVLAATGLTASLLSNHFVTDITQH-SVFRDALASVAWLVPFMVWVAVFTF 218
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ +P + S L G + I W + F I + + Y+ +Y+ AS++ +V+L
Sbjct: 219 IYALVPNTSVRFSSALAGGVVAAILWNGIGLAFGSMIASSTQYTAIYSAFASLILFMVWL 278
Query: 256 YMLGVFFILGA 266
+ + +LGA
Sbjct: 279 QLAWLIVLLGA 289
>gi|152980856|ref|YP_001353869.1| ribonuclease BN transmembrane protein [Janthinobacterium sp.
Marseille]
gi|288559228|sp|A6T022|Y2179_JANMA RecName: Full=UPF0761 membrane protein mma_2179
gi|151280933|gb|ABR89343.1| ribonuclease BN transmembrane protein [Janthinobacterium sp.
Marseille]
Length = 435
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 107/274 (39%), Gaps = 9/274 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
V ++ + A EE +A ++ + +L++ P + + T ++
Sbjct: 17 VRNLFHFAARRLTEERLPQVAGSLTFTTVLALVPILTIALAIFTTFPLFNTFRTSLEAYF 76
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P+ IA I + Q + A L A+A + + + N+ +RV
Sbjct: 77 VHNLMPKGIANTILGYLTQ-FSSKATRLSAFGAVALIVTAVAMMLMIDRVFNQIWRVKTK 135
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R L+ + V L + + + A V + P +G + +
Sbjct: 136 RPIVQRILVYWAIVTLGPLLIGASMTFTSYLFTATDGVVRGVPFVGAVFYTS------IS 189
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + +++ +P + + G + I++ + LF +++ TY+ +Y +
Sbjct: 190 ILLSMVAFTSLYIVVPNRLVEWRDAVVGGLLAAIAFEIVKRLFAAFVIKVPTYTVVYGAV 249
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A+ LV++Y+ + + GA + A++ I + +
Sbjct: 250 AAFPIFLVWVYLGWLITLAGAVVTAALPIVKYER 283
>gi|294787836|ref|ZP_06753080.1| YihY family protein [Simonsiella muelleri ATCC 29453]
gi|294484129|gb|EFG31812.1| YihY family protein [Simonsiella muelleri ATCC 29453]
Length = 405
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 101/264 (38%), Gaps = 17/264 (6%)
Query: 15 AIEHFVEE-DGWAMASHISL-SALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F EE +AS ++ S L V V LA F ID +
Sbjct: 19 LWKRFDEEIHVLQVASSLTYTSLLTLVPLLTVILVALAMFPMFGNVSEQFIDFINQNIVP 78
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
A I + ++ L +S S + V+ + + NR +RV E R +I
Sbjct: 79 SGASAIAQYLNDFRNAASQ-LTAMSIFMMLLTSLSLVQTIDQTFNRIFRVQETRPMWIQY 137
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I + VL+ LV +S + ++ L ++ + LL I
Sbjct: 138 PI-YWLVLMGVPMLVGVSMLLMSEVNMLLHIPSVWKWTSQLLWDI-------------AL 183
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L ++ +P L G IFT I + F Y+ F++Y+ +Y A+I L
Sbjct: 184 LYILYRMMPNRHVPYEHALIGAIFTAILFESCKWGFGIYVKNFNSYTLIYGAFAAIPVFL 243
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
V+L +L V + GA L AS+ +
Sbjct: 244 VWLQLLWVILLTGAVLTASLAYFR 267
>gi|120597103|ref|YP_961677.1| ribonuclease BN [Shewanella sp. W3-18-1]
gi|146291525|ref|YP_001181949.1| ribonuclease BN [Shewanella putrefaciens CN-32]
gi|166199585|sp|A4Y2G7|Y418_SHEPC RecName: Full=UPF0761 membrane protein Sputcn32_0418
gi|166199587|sp|A1REM8|Y272_SHESW RecName: Full=UPF0761 membrane protein Sputw3181_0272
gi|120557196|gb|ABM23123.1| tRNA-processing RNAse BN [Shewanella sp. W3-18-1]
gi|145563215|gb|ABP74150.1| tRNA-processing RNAse BN [Shewanella putrefaciens CN-32]
Length = 294
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 108/276 (39%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWRFLQHLRLRLVEDQINIRAGHLAYVTLLSLVPLVAVTMSMLSAFPVFKGIR 69
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEAFVYENFLPAAGDTVQIYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + + F + L +
Sbjct: 129 WRTKEKRSVVVAFSMYWMVITLGPVLVGASLVATSYVVSLKLFEDDTFSGVVPLFIER-- 186
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G + + + +G F Y+ F +Y
Sbjct: 187 ----LPMLFSVAAFLLLYMVVPNQKVKFLHALLGALVAALLFELGKKAFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|284989615|ref|YP_003408169.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284062860|gb|ADB73798.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 355
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 105/275 (38%), Gaps = 13/275 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTV 62
++ + + +D + ++ + LS+ P ++ + G++G +
Sbjct: 29 RLVRRTMGNAWNDDIFTESAAAAFWQTLSLPPLLLGLFGILGYVGGAFGPDTIAAVQQWI 88
Query: 63 IDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
ID+ G + I + VL+ + ++ + + + S+ + + ++ RA+
Sbjct: 89 IDLTGGVFSRNALDEIIAPTVADVLSTARAEVISVGFVLSFWSGSSAMASFVDAITRAHD 148
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWN 179
E+R+ R +S L+ VT +++ + P V P + +
Sbjct: 149 QYEVRNLIWQRTLSMLMYLVGLVTGILVLPLLALGP---ERVLPLLPDSWQHSAGTAVDT 205
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
L L + L ++ K LPG + + ++ G+ Y+ +
Sbjct: 206 VYYPVLGLVLLLALTTLYRVALPLKPPWYRGLPGALLAALVFLAGSSGLRLYLDWLTGSG 265
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y LA+ + L+ + + ILGA+LNA++
Sbjct: 266 YTYGALAAPIAFLLATFFIAFAIILGAQLNAAIQA 300
>gi|254507312|ref|ZP_05119448.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus 16]
gi|219549772|gb|EED26761.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus 16]
Length = 306
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 95/269 (35%), Gaps = 10/269 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
I + A +++ LLS+ P + ++ + D V +
Sbjct: 17 LIARMAHDRVNVNAGYLAYITLLSIVPMLTVLLSVLSSFSIFENAGDAIQDFVITHFVPA 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ +L+ ++ + + + + + +LN +RV R
Sbjct: 77 AGDAVKGALLEFVSN-TGKMSAVGGGFLFVAALMLISNIDKNLNYIWRVRRKR------- 128
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-FIG 192
+ + + L + + A A +YV + ++N + L
Sbjct: 129 RAVFSFSMYWMVLTLGPILVGASIAATSYVTSLKIIESEAVSGVYNLLLRWLPFLLSLFA 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++L +P K I L G + I + F YI F +Y +Y LA+I
Sbjct: 189 FVGLYLLVPNKKVHISHALIGAVVAAILFEASKKGFAAYITQFPSYQLIYGALAAIPILF 248
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKKP 281
V++Y+ + ++GAE+ A++ KP
Sbjct: 249 VWVYLCWLIVLVGAEVTAALGEKEHWSKP 277
>gi|300691298|ref|YP_003752293.1| tRNA-processing ribonuclease BN [Ralstonia solanacearum PSI07]
gi|299078358|emb|CBJ51008.1| tRNA-processing ribonuclease BN [Ralstonia solanacearum PSI07]
Length = 440
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 108/272 (39%), Gaps = 9/272 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
+ ++ A+ E+ +A ++ + +LS+ P + L Q I+ +
Sbjct: 16 LRALLRYALRRAGEDSLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFQSFRAAIEGYL 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P I++PI + Q + AKGL + S + + +LN +RV +
Sbjct: 76 FSNLVPGNISRPILTYLNQ-FSHNAKGLTAAGLVGLVVTSVMTMLMVENALNAIWRVRQR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R R++ F ++ L+ S + ++++ + L +
Sbjct: 135 RP-LAQRVLVFWALVSFGPVLIGASLSVSSYLVSIS-----AGYVAKLPYGLGVVVGVVP 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L I +++F+P + +++ + F +Y+ F TY+ +Y
Sbjct: 189 ILLSAIAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYGAF 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ LV++Y+ + +LGA + A++ I
Sbjct: 249 AALPIFLVWIYVSWLVTLLGATIAATLPIIRQ 280
>gi|322835066|ref|YP_004215093.1| ribonuclease BN [Rahnella sp. Y9602]
gi|321170267|gb|ADW75966.1| ribonuclease BN [Rahnella sp. Y9602]
Length = 289
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 110/281 (39%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y ++ ++ ++ +A H++ +LLS+ P I +L +
Sbjct: 6 LSHYLKSLWKFTRLLLKRSDKDGLTLLAGHLAYVSLLSLVPLIAVVFSLFALFPVFSEIS 65
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + I + Q +A +K + + + + ++ LN+
Sbjct: 66 MQLKTFIFSNFMPATGNTIQRYLEQFVANSSK-MTAVGTCGLIVTALLLIASVDSVLNKI 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ R + + + VL L++ S + L+L ++ + + +I +
Sbjct: 125 WDSKTTRPIVFSFAV-YWMVLTLGPILLVASVAVSSYLLSLNWLN-----ISGVHSVIDH 178
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L ++ ++ +P + L G + + + + + +FT YI F +Y
Sbjct: 179 ALRILPLLISWVTFWLLYQVVPTVRVPAKDALIGALVSGVLFELSKKIFTLYIQLFPSYQ 238
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I +++Y+ +LGAE+ ++ Y +K
Sbjct: 239 LIYGVLAVIPILFLWVYVSWCIVLLGAEITVTLGEYRSLRK 279
>gi|255036560|ref|YP_003087181.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
gi|254949316|gb|ACT94016.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
Length = 307
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 101/273 (36%), Gaps = 10/273 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPT 61
+ + + ++ D+ F+ ++G +++ +S + S+ P ++ ++ F G
Sbjct: 2 KRIKLFWSLLQDSFNEFLNDNGMKLSAALSYYTIFSLAPMLLVIISVFSIFFGREAIQGE 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAY 120
+ + G A + D + GL + + GV A ++ S+N +
Sbjct: 62 LFGQISGLVGASAASQLQDILKNAELSDKSGLAAGIGIGTLLIGATGVFAEMQDSINFIW 121
Query: 121 RVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + RLISF +L LV+ + L A + F ++
Sbjct: 122 AIKSKPKKGWLQYLKNRLISFSLILTLGFLLVVSLGASALVDLLSARLEALFSEASVVVF 181
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I N + T + + LP + + G FT +++G + + Y+
Sbjct: 182 YIVNLALVLT--IITALFTVIFKVLPDGDLRWKECIVGAAFTATLFLIGKFVISFYLGK- 238
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S Y ASI+ L ++Y + GAE
Sbjct: 239 SDLGAAYGASASIVILLTWIYYSSIILYFGAEF 271
>gi|283787447|ref|YP_003367312.1| tRNA-processing ribonuclease BN [Citrobacter rodentium ICC168]
gi|282950901|emb|CBG90578.1| tRNA-processing ribonuclease BN [Citrobacter rodentium ICC168]
Length = 290
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 103/280 (36%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + + + E++ +A +++ +LLS+ P I L V
Sbjct: 10 RHHTRPLRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSV 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A +K + + A S + A+ +LN +
Sbjct: 70 QLRHFIFANFMPATGDVIQRYIEQFVANSSK-MTAVGACGLIVTSLLLMYAIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + +L L S + L+L + F + ++L
Sbjct: 129 RSKRTRPKVYSFAV-YWMILTLGPLLAGASLAISSYLLSLRWASDFNSVIDDVL------ 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ ++ ++ +P + + G + + G F YI F +Y
Sbjct: 182 -RIFPLILSWLSFWLLYSIVPTTRVLNRDAIIGAFVAAVLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y ++
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLRQ 280
>gi|86140856|ref|ZP_01059415.1| hypothetical protein MED217_16930 [Leeuwenhoekiella blandensis
MED217]
gi|85832798|gb|EAQ51247.1| hypothetical protein MED217_16930 [Leeuwenhoekiella blandensis
MED217]
Length = 334
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/280 (20%), Positives = 118/280 (42%), Gaps = 9/280 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-D 64
+F + + + D +A ++ I+ L S+ ++ ++A + V I D
Sbjct: 13 YRLFIFLKNTYLAWDRNDPFAKSAIIAYYTLFSLPSLLMIVTSIASAFVGPEAVQGRIHD 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVV 123
+ +A I I +V + I ++AA + + GV ++ ++N + V
Sbjct: 73 EIARFISPEVAIAIEQMIGKVTVENDNWITLIISIAALIYGATGVFFQMKKTMNTIWNVT 132
Query: 124 EMRS----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
E +S I R I+FG VL+ L++ + V + L Y+ +F P++ ++
Sbjct: 133 EKKSNFKRMLINRAIAFGMVLVLGFMLLVAFVITVLLNLLTDYLSQFAPSI--TVVFADA 190
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
R + L + + LP K + + G T I +++G + +Y + S +
Sbjct: 191 LRFLISFLFIASLFAAIFKILPDVKMGYKTTVLGASITAILFLIGESILGYYFAS-SNPA 249
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++Y G ASI+ L+++ + GAE+ I K
Sbjct: 250 SVYGGAASIVLILLWVNYTCLILFFGAEITVQYAIAKKHK 289
>gi|317494540|ref|ZP_07952953.1| YihY family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917470|gb|EFV38816.1| YihY family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 298
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 95/260 (36%), Gaps = 8/260 (3%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAK 76
+ MA ++ +LLS+ P + +L V + +F +
Sbjct: 22 RVNHDRVSMMAGSLAYISLLSLVPLVTVIFSLFAAFPMFGEVSEQLKHFIFTNFVPAAGD 81
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ + Q +A +K + + A+ + + ++ +LN +R R + I +
Sbjct: 82 VVQSYLEQFVANSSK-MTAVGAVGLIVTALLVISSVDGALNHIWRSRTQRPIVYSFAI-Y 139
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
VL LV S L++ ++ + + ++ +L +
Sbjct: 140 WMVLTLGPILVGASMAISTYLLSIRWLA-----MAGVYSLVDQVLRIFPLLLSCASFWLI 194
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ +P + L G I + + +G F Y+ F +Y +Y LA I V++Y
Sbjct: 195 YCVVPTQRVPARDALCGAIVAGLLFELGKKAFGLYVTMFPSYQLIYGVLAVIPILFVWVY 254
Query: 257 MLGVFFILGAELNASMIIYY 276
+LGAE+ S+ Y
Sbjct: 255 WSWCIVLLGAEITVSLSEYR 274
>gi|313127667|ref|YP_004037937.1| membrane protein [Halogeometricum borinquense DSM 11551]
gi|312294032|gb|ADQ68492.1| predicted membrane protein [Halogeometricum borinquense DSM 11551]
Length = 428
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 91/275 (33%), Gaps = 22/275 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M ++ IE E + +A+ IS L+S+ P + G +A F+G
Sbjct: 1 MSVRIRNQISVVRSVIETIQEREVTFLAASISYYTLVSLVPLLTLGLVVASFVGGEALRA 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+D+ ++ + + L +S + + L I+ +R Y
Sbjct: 61 YVLDLAQQYLLPAGSEIVASALED--PTGQGALSVVSLAVTLWGALKLFRGLDIAFSRIY 118
Query: 121 RVVEMRSWYITR--LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
R LI+ G + ++ + + + V + + +
Sbjct: 119 GSETGGIVDQLRDGLIALGSLGAGTIGVALATTVVAIL----------------DIPFVG 162
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
L + P A + LPG +F + W V +F Y T
Sbjct: 163 VLSPLLLFGLLIAAFFPFYYIFPDAGLTVREALPGTLFAAVGWAVLGAVFGIYASTAGAS 222
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
L +I+ + + Y G+ + GA +NA +
Sbjct: 223 VA--GALGAILLLVTWFYFSGILILTGAVINAVLA 255
>gi|283834641|ref|ZP_06354382.1| hypothetical protein CIT292_08846 [Citrobacter youngae ATCC 29220]
gi|291069554|gb|EFE07663.1| tRNA-processing ribonuclease BN (RNase BN) [Citrobacter youngae
ATCC 29220]
Length = 290
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 98/279 (35%), Gaps = 10/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + V + + E++ +A +++ +LLS+ P I L V
Sbjct: 10 RHHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + A+ +LN +
Sbjct: 70 QLRHFIFANFIPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDNALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRTRP--------KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNI 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ ++ ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLVLSWLSFWLLYSIVPTTRVPNRDAVIGAFVAAVLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y LA I V++Y +LGAE+ ++ Y K
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|302556836|ref|ZP_07309178.1| ribonuclease BN [Streptomyces griseoflavus Tu4000]
gi|302474454|gb|EFL37547.1| ribonuclease BN [Streptomyces griseoflavus Tu4000]
Length = 321
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 83/274 (30%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ D+ F DG+ A ++ +L + P V LA + + +
Sbjct: 33 LRLLTDSFARFRFADGFTNARALAFQFVLGLVPCTVALVGLATSVHTESVGRVIELTLGR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + + A ++ + + NR Y +
Sbjct: 93 IVPGTGAGLVEDALDGTRRSAHDDFAGPLALWLGLGFALLNLASAMGQIERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + L A + LV+ V VA V + G +
Sbjct: 153 RDRPLPRKYGRAVVLALTAGLPLVLGFVVLVAGDAVTDAVVEVAGDPGGGPGWWTALELP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ + + P + L G + WV L Y+ + +Y
Sbjct: 213 LGLALAWVASAVIFRWSPRRTQPGYTWLAFGSAVHLLLWVAATWLLALYVKGSGAFGALY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L +++ L++ Y+ V LG A +
Sbjct: 273 GPLTAVIALLLWAYLTAVALFLGIAFAAQLEAAR 306
>gi|315178802|gb|ADT85716.1| ribonuclease BN [Vibrio furnissii NCTC 11218]
Length = 304
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 95/261 (36%), Gaps = 8/261 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWP 71
+ V + A +++ LLS+ P + ++ + V V+ D V +
Sbjct: 15 RYLLSRMVHDRVNVNAGYLAYITLLSLVPMLTVLLSILSSFSIFENVGDVVQDYVITHFV 74
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + + + + + + + + +LN +RV + R +
Sbjct: 75 PAAGDAVRHALSEFVTN-TGKMTAVGGMFLFVAALTLISNIDKNLNYIWRVRKKRRMVFS 133
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + +L LV S + +L + L +L F
Sbjct: 134 FSM-YWMILTLGPILVGASIALTSYITSLKLLDS-----EALTGAFNFFLRRLPLLLSFF 187
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++L +P K + + G + + + F YI F +Y +Y LA+I
Sbjct: 188 AFAGLYLLVPNKKVHFLHAIAGAFVAALLFELSKKAFAAYITQFPSYQLIYGALAAIPIL 247
Query: 252 LVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 248 FVWVYLCWLIVLIGAEVTAAL 268
>gi|260913449|ref|ZP_05919927.1| tRNA-processing ribonuclease BN [Pasteurella dagmatis ATCC 43325]
gi|260632389|gb|EEX50562.1| tRNA-processing ribonuclease BN [Pasteurella dagmatis ATCC 43325]
Length = 316
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 106/281 (37%), Gaps = 10/281 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M F F + A +++ S +L++ P ++ ++ ++
Sbjct: 1 MNNIFKNTLLFSKLFWLRFQQNKLSQAAGYLTYSTMLALVPLVMVVFSVFSAFPVFNEVT 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + I + ++ +K + + ++ + + ++ +LN
Sbjct: 61 GELKGFIFDNFAPQASDMVGQYIDEFVSN-SKQMSAVGVISLVVVALMLINSIDRTLNSI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R + I Y L+ ++ +++ + + L L+
Sbjct: 120 WHDTTIRPLVFSFAI---YWLILTLGPLLIGASIGVSSYIATMLNENISLPFGLKLL--- 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ ++ +P K KI G + + + +G F Y+ F +Y
Sbjct: 174 --SFVPFFLTWLIFTLIYSVVPNKKVKITHSAIGALVAAVFFTLGKQAFLWYVTNFPSYQ 231
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y +A++ L+++ + V ++GA+L + + Y KK
Sbjct: 232 LIYGAMATLPIMLLWIQLSWVVILIGAQLASVLADYSLCKK 272
>gi|315499738|ref|YP_004088541.1| ribonuclease bn [Asticcacaulis excentricus CB 48]
gi|315417750|gb|ADU14390.1| ribonuclease BN [Asticcacaulis excentricus CB 48]
Length = 301
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 102/271 (37%), Gaps = 12/271 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTV 62
++ ++ +A+ + E+ + + ++ ++LS+ P ++ +AG G +
Sbjct: 13 TLSLLGRMLREALHEWNEDKAPRLGAALAFYSILSIGPLLLIVTGIAGIAFGREAVNGYM 72
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
+ + + A + + + T+ S+ G A L+ ++N +
Sbjct: 73 MAELSALIGDQGAGAVQTMLSGAFNPQQGLVATVIGFVTLIISATGFFAQLQEAMNDIWN 132
Query: 122 VVEMRS----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
V R + RL+SF V+ L+I V + A++ + PA L+ +
Sbjct: 133 VEPQRLHWKVFIQKRLLSFALVVGIGFLLLISLVVSAGLAAFSAFIAPYVPAPVMALINL 192
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + LP A+ + + G T + + G L Y+ S
Sbjct: 193 -----IISFGVVTFLFAMTFKILPDARIEWTDVWVGAAITAVLFSFGKQLIGLYLGQ-SA 246
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S+ Y S++ LV++Y F GAE
Sbjct: 247 LSSAYGAAGSLIVLLVWIYYSTQIFFFGAEF 277
>gi|326798948|ref|YP_004316767.1| ribonuclease BN [Sphingobacterium sp. 21]
gi|326549712|gb|ADZ78097.1| ribonuclease BN [Sphingobacterium sp. 21]
Length = 320
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/290 (19%), Positives = 107/290 (36%), Gaps = 20/290 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVP 60
++++ F ++ + F ++ M++ +S + ++ P ++ + F LG
Sbjct: 6 KQFYKDAFTLLKATVIGFGDDKVSKMSAALSYYTIFALAPLLIIILAVVSFVLGDDAQQG 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRA 119
+ + A I I + + TI + Y S+ ++ SLN
Sbjct: 66 RIFQQINEYVGADAAALIQSLIKGLSVGKGSIIATIIGVGTLIYASTKVFVEMQDSLNMI 125
Query: 120 YRVVEM--RSWYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V R W R +SF VL+ LV+ + V I + + K+ P
Sbjct: 126 FNVKPKPKRGWVKLLVDRALSFSIVLILGFLLVVSLLLNVVISVISTTLIKYLPDFQVFG 185
Query: 175 L---------IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
L ++ T + L + + FLP K K + G FT I +++G
Sbjct: 186 LDLFDETTNIALYLANTLITFIVLSVLFGCIFKFLPDVKIKWKDVRSGAFFTAILFMIGK 245
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL---NASM 272
Y+ + ++ Y SI+ L+++ GAE NA M
Sbjct: 246 WAIGLYMQH-AAPASGYGAAGSIVIILLWINYTSSILFFGAEFTEKNAEM 294
>gi|146313724|ref|YP_001178798.1| ribonuclease BN [Enterobacter sp. 638]
gi|166918689|sp|A4WGB7|Y4092_ENT38 RecName: Full=UPF0761 membrane protein Ent638_4092
gi|145320600|gb|ABP62747.1| tRNA-processing RNAse BN [Enterobacter sp. 638]
Length = 290
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 100/269 (37%), Gaps = 10/269 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P + L V + VF +
Sbjct: 20 VKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFAAFPMFSEVSVQLRHFVFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A +K + + A + + A+ +LN +R ++R
Sbjct: 80 MPATGDVIQRYIEQFVANSSK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKKVRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ L +I N ++ +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASELNTVIDNVLRIFPLILSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ +P + + G + I + +G F YI TF +Y +Y LA +
Sbjct: 191 LAFWLLYSIVPTLRVPNRDAIVGALVAAILFELGKKGFALYITTFPSYQLIYGVLAVVPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
V++Y +LGAE+ ++ Y K
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|332531034|ref|ZP_08406953.1| putative ribonuclease BN [Hylemonella gracilis ATCC 19624]
gi|332039515|gb|EGI75922.1| putative ribonuclease BN [Hylemonella gracilis ATCC 19624]
Length = 408
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 99/266 (37%), Gaps = 14/266 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VV 66
+ + E F E+ A ++ + +++ P + L V+ ++
Sbjct: 28 RNTAWTLRERFREDRLGQTAGSLTFTTTIALVPLLTVALALITAFPMFAKFQDVLQKWLI 87
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I++ + I Q + A L + + + + N +RV R
Sbjct: 88 ESLVPENISRQVLAYISQ-FSRRAGRLGWTGLGVLFLTALGLIFTIDRTFNALWRVQRPR 146
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ RL+ + + LV++S + L P L L + +
Sbjct: 147 AF-GQRLLVYWAAITLGPLLVMLSLL---GTSYLGPTASLPPGLRLALDLFES------- 195
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + L V+ ++P + K + G I I+ L Y+ TYS +Y A
Sbjct: 196 LTAALALAAVYHYVPNTRVKWLHAWTGAILATIALEGAKKLLGFYLKAVPTYSAVYGAFA 255
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
++ L+++YM V +LGA + A +
Sbjct: 256 TVPILLIWIYMAWVIVLLGAVITAYL 281
>gi|168830314|gb|ACA34411.1| Rpn [uncultured bacterium pTW2]
Length = 452
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 100/265 (37%), Gaps = 8/265 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
F+++ + A +S + + ++ P +V L+ F + + + D +F +
Sbjct: 54 LWRRFLDDRLFEAAGALSYTTVFALVPLSMVVFGVLSAFPAFNDWSGQLSDYIFSNFVPS 113
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + + Q+ + A L T +A + + + NR +RV R + TR
Sbjct: 114 SARRVEGYLRQI-SGNAGQLTTAGVIALVASLLITLTGVEATFNRIWRVRTARPKF-TRF 171
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL + S ALA +++ A M
Sbjct: 172 LVYWTVLTLGALVAATSLALSTRFFALAVFETEPGRALEAVML-----RLAPMTIELAAF 226
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ +P K + G + + + + V Y+ +F Y +Y LA + L+
Sbjct: 227 AAIFRVVPHRTIKWRHAMVGALLSVLLFEVVKWGIALYLGSFGAYQKIYGPLAFVPVFLL 286
Query: 254 FLYMLGVFFILGAELNASMIIYYWR 278
++Y V +LGA ASM + ++
Sbjct: 287 WIYFGWVSILLGASFAASMSAFRYQ 311
>gi|89074479|ref|ZP_01160956.1| ribonuclease BN [Photobacterium sp. SKA34]
gi|89049767|gb|EAR55317.1| ribonuclease BN [Photobacterium sp. SKA34]
Length = 303
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 107/271 (39%), Gaps = 10/271 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ D I+ + A ++ LLS+ P I + + + +
Sbjct: 9 KIRLMMDYFSYLIQRVNHDRLTVTAGSMAYVTLLSLVPLITVVISALSAVPVFAGLGEQL 68
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYR 121
+ V + + + + ++ G T +AA + + + ++ SLN +R
Sbjct: 69 QNFVIENFVPAAGAVVKTYLNEFVS--NAGKMTAVGIAALFVVAMMLISSIDTSLNYIWR 126
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R W I+ S +++L +++ S + V+ L + + L +
Sbjct: 127 IKKKRRWIIS--FSIYWMILTLGPILLGSSIAVSSYLGSLALLEH----QALHGFLQQSL 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + + ++L +P K L G + I + + F Y+ F +Y +
Sbjct: 181 RWFPSIMSSLAFLLLYLLVPNCKVTFRHALIGSLSASILFELSKKGFAIYLAHFHSYQMI 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y LA+I V++Y+ +LGAE+ AS+
Sbjct: 241 YGALAAIPILFVWIYLCWCIVLLGAEITASL 271
>gi|41408921|ref|NP_961757.1| hypothetical protein MAP2823 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254776040|ref|ZP_05217556.1| hypothetical protein MaviaA2_15410 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41397280|gb|AAS05140.1| hypothetical protein MAP_2823 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 333
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 108/283 (38%), Gaps = 13/283 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG---AHQFVPTV 62
++ I + ++ ++ ++ + LS+ P ++ ++ +P++
Sbjct: 11 HHIWRITLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGLLGTLAYVAPLFGPDMLPSI 70
Query: 63 IDVVFGAW-----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + P V+ + I + + + ++ L + + S+ + A S+
Sbjct: 71 LRQLISTAHSVFSPSVVNEIIEPTVRDIANNARGEVVSLGFLISLWAGSSAISAFVDSVV 130
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
A+ +R R + ++ V +V + + V P V + P L ++
Sbjct: 131 EAHDQTPLRHPVRQRFFALFLYVVMLVGVVATAPLVVVGP---RKVGEHIPL--GLSNVL 185
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G A ++ L I ++ ++ ++ G + +V + Y+ ++
Sbjct: 186 RYGYYPALIVGLTIAVMILYRVALPEPLPSHRLILGAMLATTVFVTATLGLRFYLRWITS 245
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y L++ + L+F + G +LGAELNA++ + K
Sbjct: 246 TGYTYGALSTPIAFLLFAFFGGFAIMLGAELNAAVQEEFPAPK 288
>gi|91779327|ref|YP_554535.1| ribonuclease BN [Burkholderia xenovorans LB400]
gi|91691987|gb|ABE35185.1| Ribonuclease BN [Burkholderia xenovorans LB400]
Length = 411
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 17/263 (6%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
MA+ I+ A S+ P +V +AG+ GA + D + G + A + +
Sbjct: 1 MAASIAFYAAFSLAPTLVMVIAVAGWVFGAEAARGELFDHIHGLLGDQAAAGVQTIVENA 60
Query: 86 LAVPAKG----LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-----WYITRLISF 136
+ G + + S LA +S +L +LN + RS RLISF
Sbjct: 61 HHSGSAGGIAAIISFSMLAI--GASATFSSLNSALNIVWPYTGPRSSSVIALVRVRLISF 118
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
G VL + L++ + + +V K+ ++I ++ +L L +
Sbjct: 119 GLVLGVAFLLIVSLVL----DTIITFVGKWLWGDSPYVVIGNLLQLGVGLLVLACAFAGL 174
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
FLP A+ + + G I + + G LF YI + ++ + S+ L++LY
Sbjct: 175 LKFLPDARVRWLDAFVGGIVAAVLFSAGKKLFALYIAH-AGMASSFGAAGSLAVLLMWLY 233
Query: 257 MLGVFFILGAELNASMIIYYWRK 279
+LGAE +A+ + +
Sbjct: 234 FSAAVLLLGAEFSAARGRIHDPR 256
>gi|297621313|ref|YP_003709450.1| putative phosphoesterase, RecJ-like protein [Waddlia chondrophila
WSU 86-1044]
gi|297376614|gb|ADI38444.1| putative phosphoesterase, RecJ-like protein [Waddlia chondrophila
WSU 86-1044]
Length = 414
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 100/267 (37%), Gaps = 2/267 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ +F++ +I F ++ + AS ++ LLS+ PF+ +A G Q +
Sbjct: 2 RFLKYIFNVAKLSISGFFKDQCFLHASSLTFYTLLSIVPFLAVAFGVAKGFGFEQTLEDE 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYR 121
+ F E + K + + +L T + + F + + S+N ++
Sbjct: 62 LHQRFSE-HEQVLKLVLEFARSLLEQVEGSFITGVGVIFLFLFVMSLFWTIETSMNVIWK 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R F ++ + S V + L L +
Sbjct: 121 VKKTRRPVRMLTDYFVMMIFFPFIFAVASSSMVYVTTVLHQAALESELLQKASPYFFMFY 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ +++ + +F+P K + L I ++ + + + + S YS +
Sbjct: 181 KGLALVMIWLLFAALFIFMPNKKVEWKYGLIAGILAGSAYYLIQQVMIIFQIGVSQYSAI 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A++ L++L + V ++GA++
Sbjct: 241 YGSFAALPIFLLWLQISWVTVLMGAQV 267
>gi|218130143|ref|ZP_03458947.1| hypothetical protein BACEGG_01730 [Bacteroides eggerthii DSM 20697]
gi|217987647|gb|EEC53975.1| hypothetical protein BACEGG_01730 [Bacteroides eggerthii DSM 20697]
Length = 439
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 6/265 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + + I
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNKASALTYSTLLAIVPILAIVFAIARGFGFDNLMESQIV 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV 123
FG P + I + L+ G+F I + + N + + I+ NR ++V
Sbjct: 91 KGFGG-PSETTEVIFQFVNSYLSQTKSGIFIGIGLIMLLWTVLNLINNMEITFNRIWQVK 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RS Y F +LL + LV+ + + + L V F +I
Sbjct: 150 KARSMYRKITDYFSMLLLIPLLLVVSGGLSIFMSTMLKNVADFTLLAPIGKFLI----RL 205
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + +++F+P K K+ L + T + L+ + S Y+ +Y
Sbjct: 206 IPFVLTWFMFTGLYVFMPNTKVKLKHALISGVLTGTAHQAFQFLYISSQLWVSRYNAIYG 265
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + + GAEL
Sbjct: 266 SFAALPMFLLWLQISWTICLFGAEL 290
>gi|256419458|ref|YP_003120111.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
gi|256034366|gb|ACU57910.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
Length = 317
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/286 (18%), Positives = 109/286 (38%), Gaps = 10/286 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
+ + I+ + F+++ +++ +S + S+ P ++ L FLG
Sbjct: 3 IPSIVKTYWQILRQTVNDFMDDKVLKLSAALSYYTIFSIAPMLIVIITLCDVFLGKEAIE 62
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNR 118
+V + A I I + T I + +++ ++ S+N
Sbjct: 63 GSVYGQINDMVGNEAALQIQQMIKNAALSGDSTVATVIGIVTLIIGATSVFGEIQDSINF 122
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+++ + RL+SF V+ L++ + I L + FP + +
Sbjct: 123 IWQLKAKPKNGLLKMLLNRLLSFSMVVSLGFILMVSLAMNGIIELFSQQLAVLFPQVTMV 182
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L+ I N T L + + LP AK + ++ G + T I +++G Y+
Sbjct: 183 LVYIVNLA--LTFLIISFLFAIIFKVLPDAKVRWKHVIVGAVTTAILFMIGKFAIGMYLG 240
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S T Y SI+ L+++Y + GAE + ++ K
Sbjct: 241 S-SKVGTAYGAAGSIVIILLWVYYSAIILYFGAEFTQVYVQHFGGK 285
>gi|295689518|ref|YP_003593211.1| ribonuclease BN [Caulobacter segnis ATCC 21756]
gi|295431421|gb|ADG10593.1| ribonuclease BN [Caulobacter segnis ATCC 21756]
Length = 320
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 91/271 (33%), Gaps = 8/271 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ A+ D +S ALL+VFP + L + + +
Sbjct: 28 ILRVLGLALSRLWGRDVMLYVGGVSFFALLAVFPGLAILIGLYSLFLTPETAARQANKLA 87
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVE 124
P DE ++ P + + + AY + G +AL L+ +
Sbjct: 88 ELIPSGARGMFQDEFGRLAHAPGSAVSLQSAVVLIVGAYAAHRGFKALLAGLSFIHDEEN 147
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ L++ ++ A L MS VF+ + L + + A + + W
Sbjct: 148 QRGFFGFNLMALLVLIAAFGLLFFMSGVFLTLRLLGSALNLRPLAGVSWIQSEWTW---- 203
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ +G+ V+ + + + G + V + Y+ Y
Sbjct: 204 ASFGIVVGMTLVYRYAMSRAPVGWRASTSGGVAAAALCVFMSWASAFYVEKIVHLGATYG 263
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
+++++ L++L G L + I
Sbjct: 264 SISAVIIFLIWLSWSVNAIFFGGALATEVEI 294
>gi|325982395|ref|YP_004294797.1| ribonuclease BN [Nitrosomonas sp. AL212]
gi|325531914|gb|ADZ26635.1| ribonuclease BN [Nitrosomonas sp. AL212]
Length = 328
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 111/275 (40%), Gaps = 10/275 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
M+ F + + + I FVE + M++ ++ L ++ P + + F G
Sbjct: 1 MKLTFNNAWPVFKEVIFEFVEVNVLKMSASLAFYTLFALAPMFIIILTIVQFFFGLEAIE 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNR 118
+ + A + + I L T ++ F + GV ++ S+N
Sbjct: 61 GDLYPQLSELIGSQAATQLEEMIKNAAITERSALSTTGSVMMLMFLATGVFVEIQESINY 120
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+R+ I R +SF V+ L++ + A+ + + ++K FP +
Sbjct: 121 IWRLKAKPKTGVIKLIINRFLSFSMVISLGFILLVSLALNAALEVLMQSLQKMFPII--T 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ + ++ + T + + + LP AK + +++ G I T + +++G + T Y+
Sbjct: 179 VYLTYSLNLILTFIVITFVFSCIFKILPDAKIRWRNVIVGAITTALLFMIGKSVITFYLS 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S ++ Y SI+ ++++Y + A L
Sbjct: 239 N-SDVNSTYGAAGSIVIIMLWVYYSAIILYFSAIL 272
>gi|332526765|ref|ZP_08402867.1| putative ribonuclease BN [Rubrivivax benzoatilyticus JA2]
gi|332111168|gb|EGJ11200.1| putative ribonuclease BN [Rubrivivax benzoatilyticus JA2]
Length = 412
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 106/281 (37%), Gaps = 12/281 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID- 64
D + + F E+ AS ++ + L+++ P + + ++
Sbjct: 27 WPWLDTLRTLRQRFREDRLGLTASSLTFTTLIALVPLVTVMLAVFTAFPIFAKFQIALEK 86
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P+ IA+P+ + Q + + ++ L + + + +LN +RV
Sbjct: 87 YFLQSLVPDTIARPVMRALTQFASQANRA-GSVGLLFLGATALALMLTIDRTLNAIWRVR 145
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ Y ++ +++ AL+ R L + N +
Sbjct: 146 QPRPIAQRVLV---YWAALTLGPLVVGVSLSMTSYALSASRGLVGVLPGGVSAALNVAEF 202
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A + A G + ++P + G +F +++ Y+ YS++Y
Sbjct: 203 ALLAAALAG---LFRYVPNTTVRWQHAWAGALFVAVAFEFAKEGLAWYVDKVPMYSSVYG 259
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA---SMIIYYWRKKP 281
AS+ L+++Y+ V +LGA + A S+ + R+ P
Sbjct: 260 AFASLPILLLWIYLSWVIVLLGAVIAAYAPSLQMRVVRRPP 300
>gi|110834404|ref|YP_693263.1| ribonuclease BN-like family protein [Alcanivorax borkumensis SK2]
gi|110647515|emb|CAL16991.1| Ribonuclease BN-like family protein [Alcanivorax borkumensis SK2]
Length = 458
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/280 (14%), Positives = 101/280 (36%), Gaps = 7/280 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F + + F E+ A+ ++ + L ++ P + + + A Q
Sbjct: 40 QARFNSIKAFFVLLVRQFNEDGCRQSAAALTYTTLFAIVPVMTVSFVVLSSVPALQGKSA 99
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + F + + D + A A L + + S + + +LNR +
Sbjct: 100 QLQEWAFEYFVPSAGNMLLDHLQS-FAKQATNLTVLGIVFLVVTSVLMLSTVEQTLNRIW 158
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V R ++ L+ + + L + L + + + + F + L +
Sbjct: 159 KVQTPRKGLVSLLMYWALLSLGPICLGLGLAITSYLTS-----QAIFSDTVSYLGGVRLW 213
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L L ++ +P + G + + + FT +I +Y
Sbjct: 214 LAVLPFLFTTAMLTLMYTVVPNTTVPFRQGVLGAAMAALLFELAKGAFTFFIKQAPSYQV 273
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++Y+ + GAEL +++++ ++
Sbjct: 274 VYGAFAAVPVFLLWIYISWTIVLGGAELVRALVVFQEHQR 313
>gi|317476636|ref|ZP_07935881.1| YihY family protein [Bacteroides eggerthii 1_2_48FAA]
gi|316907232|gb|EFV28941.1| YihY family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 439
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 103/265 (38%), Gaps = 6/265 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + + I
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNKASALTYSTLLAIVPILAIVFAIARGFGFDNLMESQIV 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV 123
FG P + I + L+ G+F I + + N + + I+ NR ++V
Sbjct: 91 KGFGG-PSETTEVIFQFVNSYLSQTKSGIFIGIGLIMLLWTVLNLINNMEITFNRIWQVK 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RS Y F +LL + LV+ + + + L V F +I
Sbjct: 150 KARSMYRKITDYFSMLLLIPLLLVVSGGLSIFMSTMLKNVADFTLLAPIGKFLI----RL 205
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + +++F+P K K+ L + + L+ + S Y+ +Y
Sbjct: 206 IPFVLTWFMFTGLYVFMPNTKVKLKHALISGVLAGTAHQAFQFLYISSQLWVSRYNAIYG 265
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + + GAEL
Sbjct: 266 SFAALPMFLLWLQISWTICLFGAEL 290
>gi|330820880|ref|YP_004349742.1| YihY family protein [Burkholderia gladioli BSR3]
gi|327372875|gb|AEA64230.1| YihY family protein [Burkholderia gladioli BSR3]
Length = 296
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 100/263 (38%), Gaps = 13/263 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA F + MA+ I+ + S+ P +V +AG F GA V + V
Sbjct: 22 DAFRRFSADHCTTMAASIAFYSAFSLAPMLVMVIAVAGWFFGADAARGEVFNQVHSLIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + + G IS + A +S +L +L + E R
Sbjct: 82 DAAAGVQTIVENAHRRDSNGGAAAAISFVMLAIGASATFSSLNTALGMVWPSQEKRWSSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ +L+ + A
Sbjct: 142 FGLVRVRLISFGLVLGVAFLLIVSLLL----DTAITFIGRWLWGATPFVLVGNLLQFTAG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A L G I + + + G LF Y+ T ++ +
Sbjct: 198 IAILACAFAALLKFLPDAHVTRRDALTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
S+ L++LY +LGAE
Sbjct: 257 GSLAVLLMWLYFSAAVLLLGAEF 279
>gi|256425588|ref|YP_003126241.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
gi|256040496|gb|ACU64040.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
Length = 322
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 112/285 (39%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ F F I+ A F+++ ++ ++ + S+ P ++ +LAG + + T
Sbjct: 9 KKSFKDYFTILKAAFTGFMDDMALKFSASLAYYTVFSLAPLLLLLISLAGVFLSRDVIQT 68
Query: 62 -VIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V + G A + + I + + + I + ++ ++ S+N
Sbjct: 69 KVFSEINGIVGNEAALQVQEMIRNLEMTGKSTISVIIGVVTLIIGATTVFGEIQQSINII 128
Query: 120 YRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
++V RL+S ++ L++ + A+ ++ F P + L
Sbjct: 129 WQVKPKPKKGWLKIIKDRLLSGSMIVTLGFLLLVSLVLNGALDAISDRLKHFLPDVTVTL 188
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + + + + I + LP AK + G FT + +++G ++ YI
Sbjct: 189 FTIIS--YIISFMIISILFGVIFKVLPDAKISWKDVRSGAFFTAVLFMIGRLVIGIYIEK 246
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+T S+ Y S++ ++++Y GAE + + ++
Sbjct: 247 SAT-SSTYGAAGSLIVIMLWIYYTAAILYFGAEFTRAYADFNGKR 290
>gi|118462877|ref|YP_882777.1| hypothetical protein MAV_3600 [Mycobacterium avium 104]
gi|118164164|gb|ABK65061.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 333
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/283 (14%), Positives = 108/283 (38%), Gaps = 13/283 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG---AHQFVPTV 62
++ I + ++ ++ ++ + LS+ P ++ ++ +P++
Sbjct: 11 HHIWRITLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGLLGTLAYVAPLFGPDMLPSI 70
Query: 63 IDVVFGAW-----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + P V+ + I + + + ++ L + + S+ + A S+
Sbjct: 71 LRQLISTAHSVFSPSVVNEIIEPTVRDIANNARGEVVSLGFLISLWAGSSAISAFVDSVV 130
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
A+ +R R + ++ V +V + + V P V + P L ++
Sbjct: 131 EAHDQTPLRHPVRQRFFALFLYVVMLVGVVATAPLVVVGP---RKVGEHIPL--GLSNVL 185
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G A ++ L I ++ ++ ++ G + +V + Y+ ++
Sbjct: 186 RYGYYPALIVGLTIAVMILYRVALPEPLPSHRLILGAMLATTVFVTATLGLRFYLRWITS 245
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y L++ + L+F + G +LGAELNA++ + K
Sbjct: 246 TGYTYGALSTPIAFLLFAFFGGFAIMLGAELNAAVQEEFPAPK 288
>gi|145224526|ref|YP_001135204.1| ribonuclease BN [Mycobacterium gilvum PYR-GCK]
gi|315444857|ref|YP_004077736.1| hypothetical protein Mspyr1_32900 [Mycobacterium sp. Spyr1]
gi|145217012|gb|ABP46416.1| ribonuclease BN [Mycobacterium gilvum PYR-GCK]
gi|315263160|gb|ADT99901.1| predicted membrane protein [Mycobacterium sp. Spyr1]
Length = 323
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 102/277 (36%), Gaps = 15/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ I+ + ++ +A ++ + LS+ P ++ ++ F P +
Sbjct: 21 HHIRHIVARTLGKSWDDSIFAESAQAAFWCALSLPPLLLGMLGSLAYVA-PLFGPDTLLT 79
Query: 66 VFGAW---------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ P V+ + I + ++ + ++ + + + S+ + A S+
Sbjct: 80 IENQLISLAGKFFSPNVVGEIIEPTVRDIVNGARGEVVSLGFVISLWAGSSAISAFVDSI 139
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
A+ +R R + G ++ + ++ + P V +F P + L
Sbjct: 140 TEAHGQTALRHPVRQRFYALGLYVVMLIGAIVTAPFLALGP---RKVAEFIPDSWDDALR 196
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+AL + + ++ +L G + ++V Y+ +
Sbjct: 197 F--AYFPVLFVALAVAVNVLYRVSLPKPLPTHRLLTGSLLAAGVFLVATWGLRVYLTWIT 254
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ Y LA+ + L+F + LG ++GAELNA++
Sbjct: 255 STGYTYGALATPIAFLLFAFFLGFAIMIGAELNAAIE 291
>gi|152981654|ref|YP_001355206.1| ribonuclease BN [Janthinobacterium sp. Marseille]
gi|151281731|gb|ABR90141.1| ribonuclease BN [Janthinobacterium sp. Marseille]
Length = 301
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 115/279 (41%), Gaps = 12/279 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + +A++ ++++ +M + ++ + S+ P ++ +AGF I
Sbjct: 10 WSLTKEAVQAWMQDFAPSMGAALAYYTIFSLAPMLIIVIAIAGFFFGQNTAQGEIIAQLR 69
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ IL+ ++ P +G+ T+ L ++ L+ +LNR ++V
Sbjct: 70 GLVGDTGAAAVEGILRSVSQPGQGIVAATLGTLTLMIGATAVFGELQSALNRIWKVTANN 129
Query: 127 S------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + TRL+SFG V+ L+I + A+ + LG+ +++
Sbjct: 130 NTGGVWKFVCTRLLSFGMVMGLGFMLLISMILSAALAALGKWWGS---MLGDWTIVLEIL 186
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + ++ F+P A ++ G + T + + VG L Y+ + ++
Sbjct: 187 NLAVSFGVITTLFAMIYKFMPRATIAWRNVWFGAVITALLFTVGKFLIGLYLGK-TNMAS 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ L ++Y F+LGAE + + +
Sbjct: 246 GFGAAGSLVVLLAWIYYSAQIFLLGAEFTWVLSQRHEAR 284
>gi|239945205|ref|ZP_04697142.1| putative integral membrane protein [Streptomyces roseosporus NRRL
15998]
Length = 320
Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 92/253 (36%), Gaps = 14/253 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 10 RMAWHLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGMIGLLGYVDEWTTTTTVASI 69
Query: 66 VFGAWPEV--------IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + V + +I A + S V ++
Sbjct: 70 ERNILSASQTVLSERGVNDFAKPLLADVTTGARPDVISIGFAIALWSGSRAVNVFIDTIT 129
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + R TRL++F ++A + ++ + V P V +F P ++ ++
Sbjct: 130 VMYGLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP---DRVVEFVPWGTEVIAVL 186
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +L L ++ +S + +PG + WV+G+ L Y+
Sbjct: 187 Y---WPLVILLTIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTNTVE 243
Query: 238 YSTMYAGLASIMT 250
T+Y LA+ +
Sbjct: 244 GPTIYGSLAAPIA 256
>gi|317125026|ref|YP_004099138.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
gi|315589114|gb|ADU48411.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
Length = 366
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 105/270 (38%), Gaps = 14/270 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTV 62
+ + I + +A+ LLS+ PF++ G+LG + + +
Sbjct: 21 RLTLETIRVCLNYRVTGLAAEGGFFLLLSLPPFVLGLFGGVGYLGNILGADSVERLLAVI 80
Query: 63 IDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
D G I + + + VL L ++ L A + S + +++ Y
Sbjct: 81 TDYASGFLTQGSIEELLLPTVRDVLRDGRPDLISVGFLLALWSGSRALNVFVDTISIMYG 140
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R R ++FG + V V++ + + P + L + L ++ +
Sbjct: 141 QGDSRGILRQRFLTFGLYTVGIVVAVVLLPLVLLGPAIIE------GWLPDRLKLLTSAY 194
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L + + + +PG + W++ +++ + S++
Sbjct: 195 WPLVLVLSIALLTTLFHIATPRRGRWWRNVPGALLALAIWLLASLVVRSALEASLGGSSI 254
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y L++ + L++LY+L + ++GA LNA+
Sbjct: 255 YGPLSTPIVLLIWLYVLAIAILIGAGLNAA 284
>gi|119945515|ref|YP_943195.1| putative ribonuclease BN [Psychromonas ingrahamii 37]
gi|119864119|gb|ABM03596.1| putative ribonuclease BN [Psychromonas ingrahamii 37]
Length = 442
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 106/268 (39%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + II AI F E+ AS ++ +LLS+ P +A G + +
Sbjct: 27 MKLFGLRQLRIILLAIRGFAEDKCMLRASALTFFSLLSMVPVAAMAFGIAKGFGFDKKLE 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T++ EV+ K I + + I + + + + S N +
Sbjct: 87 TLLFDNLQGQEEVVEKLIGFSQAMLENTQGGIIAGIGTVVLFWAVIKVLGQIEESFNEIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + RS+ +L+ V L+I S V I + + + LG ++ +I
Sbjct: 147 GIKKSRSFARKFSDYVSIMLICPVLLIISSSTTVIISSQVTLLVEKISFLGPIVPLIITS 206
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ F+++F+P K + L G I ++ + ++ + V Y
Sbjct: 207 LKILPYAVIWTVFTFIYIFIPNTKVNFKAGLLGGIIAGTTYQIVQWIYITFQVGVLKYGA 266
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ LV+L M + +LGAE+
Sbjct: 267 IYGSFAALPLFLVWLQMSWLIVLLGAEV 294
>gi|170017722|ref|YP_001728641.1| hypothetical protein LCK_01373 [Leuconostoc citreum KM20]
gi|169804579|gb|ACA83197.1| Predicted membrane protein [Leuconostoc citreum KM20]
Length = 292
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 11/272 (4%)
Query: 1 MREYFCIVFDIIYDAIEH--FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++ F I++ + A+ F + + ALL++FP I+ L +Q
Sbjct: 5 MKKQFDIIYKRYHLAVLKDLFDRAQIGYVGPTFAYYALLTIFPTIMSVVMLISITNVNQ- 63
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+I VV P+ I + + VL+ L + S + S + R+S NR
Sbjct: 64 -KDMIAVVSSILPQNIQAIVLPILRSVLSSTHLTLLSFSVPFTLWTVSQVLAVFRMSFNR 122
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V E S +TR+ SF ++LL ++ V + LA V ++ P + II
Sbjct: 123 IADVEEHISGLLTRVWSFLWLLL----IIAAFGVLMIGSNILAIVVRYIPG-SQVQNIII 177
Query: 179 NGRIYATMLALFIGLIFVHLFLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+G + L +F+ L+ ++ FLP ++ I + G I + V FT Y
Sbjct: 178 SGSKWFIWLGMFLLLVMLNYFLPTKMGRAPIKWVALGSFIELIMLNLLNVGFTWYAQVGI 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y + SI+ L++L ++G +LG L
Sbjct: 238 KQYNFYQSIGSIIVLLIWLNLIGTILVLGYVL 269
>gi|15603481|ref|NP_246555.1| ribonuclease BN [Pasteurella multocida subsp. multocida str. Pm70]
gi|32699647|sp|Q9CKJ9|Y1616_PASMU RecName: Full=UPF0761 membrane protein PM1616
gi|12722013|gb|AAK03700.1| Rbn [Pasteurella multocida subsp. multocida str. Pm70]
Length = 316
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/276 (13%), Positives = 105/276 (38%), Gaps = 10/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M + F + A +++ S +L++ P ++ ++ ++
Sbjct: 1 MNNVLKNAGLFLRLFWLRFQQNKLSQAAGYLTYSTMLALVPLVMVVFSVFSAFPVFNEVT 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + I + ++ +K + + ++ + + ++ +LN
Sbjct: 61 DELKGFIFNNFAPQASDMVGQYIDEFVSN-SKQMSAVGVISLVVVALMLINSIDRTLNSI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R + I Y L+ ++ +++ A + + L
Sbjct: 120 WHDTTIRPLVFSFAI---YWLILTLGPLLIGASIGVSSYIAAMLNENISLPFGL-----K 171
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ ++ +P K KIM G + + + +G F Y+ TF +Y
Sbjct: 172 ILSFVPFFLTWLIFTLIYTVVPNKKVKIMHSAIGALVAAVFFTLGKQAFLWYVTTFPSYQ 231
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y +A++ L+++ + V ++GA+L + + Y
Sbjct: 232 LIYGAMATLPIMLLWIQLSWVVILIGAQLASVLADY 267
>gi|256392588|ref|YP_003114152.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256358814|gb|ACU72311.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 324
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 2/269 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA DG++ A ++L L+ P ++ LA ++ + + +
Sbjct: 44 WTLLRDAFVRLRFGDGFSHARALALQMALAAMPGLIALVGLAQTAHNARWGRALEETIDR 103
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + + + A + + + NR Y V R
Sbjct: 104 VTPAASRASVDQALRGAGDGGRTAV-WLGLIGALLSLTVAMGQIERGANRIYGVQRDRPS 162
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+F LLA V + + V + + L R L
Sbjct: 163 LAKYSGAFIRALLAGVPVACGLALLVFGGSFGDSLADTYRWSPAALDAWNVVRWPVGALL 222
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + P + +L G + W+ VL Y+ ++ Y L +
Sbjct: 223 ALVSAGVLFRKAPRRRQPSATWLLFGAAVSLAVWLAATVLLAWYVEGSHSFGATYGPLTA 282
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ L++ + + G A +
Sbjct: 283 VLAFLLWANLSAIALFYGIAFAAQLESRR 311
>gi|237727990|ref|ZP_04558471.1| ribonuclease BN [Citrobacter sp. 30_2]
gi|226910247|gb|EEH96165.1| ribonuclease BN [Citrobacter sp. 30_2]
Length = 290
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 10/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + V + + E++ +A +++ +LLS+ P I L V
Sbjct: 10 RHHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSV 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFIPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDNALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRTRP--------KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ ++ ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLVLSWLSFWLLYSIVPTTRVPNRDAVIGAFVAAVLFETGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y LA I V++Y +LGAE+ ++ Y K
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|329955890|ref|ZP_08296693.1| YihY family protein [Bacteroides clarus YIT 12056]
gi|328525270|gb|EGF52320.1| YihY family protein [Bacteroides clarus YIT 12056]
Length = 439
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 102/265 (38%), Gaps = 6/265 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + + I
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNKASALTYSTLLAIVPILAIVFAIARGFGFDNLMESQIV 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV 123
FG P + I + L+ G+F + + + N + + I+ NR ++V
Sbjct: 91 KGFGG-PSETTEVIFQFVNSYLSQTKSGIFIGVGLIMLLWTVLNLINNMEITFNRIWQVK 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RS Y F +LL + LV+ + + + L V F ++
Sbjct: 150 KARSMYRKITDYFSMLLLIPILLVVSGGLSIFMSTMLKNVADFTLLAPIGKFLV----RL 205
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + +++F+P K K L I + L+ + S Y+ +Y
Sbjct: 206 IPFVLTWFMFTALYVFMPNTKVKFKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYG 265
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + + GAEL
Sbjct: 266 SFAALPMFLLWLQISWTICLFGAEL 290
>gi|260220892|emb|CBA28912.1| hypothetical protein Csp_A09510 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 418
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 19/263 (7%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + +++ P I + V+ ++ P+ I
Sbjct: 38 ERFREDRLGLTASSLTFTTTIALVPLITVALAVFTAFPMFAKFQDVLQKWLIESLVPDNI 97
Query: 75 AKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + + Q G+ ++ L + + + +LN +RV + R + L
Sbjct: 98 ARQVLGYLNQFAGKASRLGVAGLTILLG--TALALIFTIDRTLNSIWRVKKRRPFGQRVL 155
Query: 134 ISFGYV----LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I + V LL +L I S+ A + + L + L + +
Sbjct: 156 IYWAAVTLGPLLLGASLSITSYAITASKGVVGGLPGGLTLLLDSLQ----------FVLV 205
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
G + ++P + G +F + Y+ TYS +Y A++
Sbjct: 206 AAGTAAMFHYVPNTHVRWGHAWMGGLFVSTGMELARKGLALYLSKVPTYSAVYGAFATVP 265
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
L+++Y+ V +LGA L A +
Sbjct: 266 ILLIWIYIAWVIVLLGAALTAYL 288
>gi|120435843|ref|YP_861529.1| ribonuclease BN-like family protein [Gramella forsetii KT0803]
gi|117577993|emb|CAL66462.1| ribonuclease BN-like family protein [Gramella forsetii KT0803]
Length = 336
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 110/285 (38%), Gaps = 9/285 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
M I ++ + + + + +A ++ I+ AL S+ ++ ++AG+ G
Sbjct: 1 MFNSLKIFLKLLKNTYISWDKNEPYARSATIAYYALFSLPSLLIIVVSIAGYFYGREAVQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
+ + A I + I L + ++ L++++N
Sbjct: 61 GRITGQIVDFIGLDAATAIENMIESAALSQDSILAVAFGFAMLIFGATGVFFQLKVAMNN 120
Query: 119 AYRVVEMR-SWYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V + +++ R+IS G + + + L+I V + + V + FP +
Sbjct: 121 IWNVAARKTNFFKMVVDRMISLGMIFVIGLLLLITLVVSTLLQIIADEVGELFPNITESA 180
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ I N + L + + LP + K+ + G T I +++G L + Y
Sbjct: 181 VDISNS--VLSFLFITTLFALIFKLLPDIRIKLKTTYTGAALTAILFLIGKFLISFYFGQ 238
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S +++Y +S++ L+++Y + GAE + K
Sbjct: 239 -SEPASVYGAASSVVLILLWVYYTCLILFFGAEFTVQYALVKKEK 282
>gi|311281658|ref|YP_003943889.1| ribonuclease BN [Enterobacter cloacae SCF1]
gi|308750853|gb|ADO50605.1| ribonuclease BN [Enterobacter cloacae SCF1]
Length = 290
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 94/269 (34%), Gaps = 10/269 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ E+ +A +++ +LLS+ P + L V + VF +
Sbjct: 20 LKLLWRRIDEDQMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSATLRHFVFTNF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A +K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSSK-MTAVGACGLIVTALLLMHAIDSALNTIWRSHRTRPHV- 137
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ L +I N +L +
Sbjct: 138 -------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASELNGVIDNTLRIFPLLLSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ +P + + G F + +G F YI F +Y +Y +A +
Sbjct: 191 ISFWLLYSVVPTTRVPNRDAVIGAFFAAALFELGKKGFALYITMFPSYQLIYGVIAVVPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
V++Y +LGAE+ ++ Y K
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|21323718|dbj|BAB98344.1| tRNA-processing ribonuclease BN [Corynebacterium glutamicum ATCC
13032]
Length = 385
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 106/281 (37%), Gaps = 24/281 (8%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVFG 68
+ + + +A+ ++ ++LS+ P ++ G ++ + + + V D V
Sbjct: 61 LNRTVRDVFPDGLLDLAALLTFFSILSIAPAVLLGYSVITIFLASDSTEILNLVRDEVNQ 120
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE + + I + A G + + A + SS V A N Y E R
Sbjct: 121 YVPEDQSHVVNGVIDSIAGSAAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRSEGR 180
Query: 127 SWYITRLISFGYVLLASV-------------TLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ + L + TLV+ F +A PL ++ L +
Sbjct: 181 TLIKRWAMLLFLNLALLLGIIIILVSWVLNETLVMGIFAPIAEPL---HLTNVLSFLTDR 237
Query: 174 LLIIWNG-RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHY 231
+ IW R + L + + ++ + P A+ K + G + ++ V Y
Sbjct: 238 FMPIWIWVRFPVIVGVLIMFVATLYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFY 297
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F+ +S+ Y + S++ + L++ + I+G +++ +
Sbjct: 298 FTLFAAFSS-YGAVGSLLAVFIALWVFNICLIIGLKIDVEI 337
>gi|226366211|ref|YP_002783994.1| hypothetical protein ROP_68020 [Rhodococcus opacus B4]
gi|226244701|dbj|BAH55049.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 390
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 79/210 (37%), Gaps = 5/210 (2%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
V+ + I + VL + ++S L + + S+ + S+ A+ E R
Sbjct: 98 SVVEQIIRPTVGDVLERGRPEIVSLSFLLSLWAGSSAISTFVDSIVEAHGQQEARHPVWQ 157
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLAL 189
R+ + ++ + V + P V + P + I+ L L
Sbjct: 158 RVFALLLYVMFLILAVFTLPLVALGPTL---VGRVLPESWRTIGTEIVDTFYYPGVGLLL 214
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+GL ++ +L G + + ++ + Y+ + Y LA+ +
Sbjct: 215 IVGLTTLYKVALPRSLPWHRLLGGALVAGVFFLGASTCLRRYLSWVAGTGYTYGALATPI 274
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+F + LG +LGAE NA++ ++ +
Sbjct: 275 AFLLFTFFLGFAVVLGAEFNATVQEFWPAR 304
>gi|241896654|ref|ZP_04783950.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
gi|241870135|gb|EER73886.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
Length = 311
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 113/270 (41%), Gaps = 6/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ I+ D +S I+ LLS+FP IV L +LG + T + A
Sbjct: 24 KLVATIIDVTSRVDIITASSSIAYFGLLSIFPAIVILGTLLPYLGLK--IDTALKYAQTA 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + I I +L+ G+ + S + + S V ++RI+ N Y V
Sbjct: 82 VPESVFTFIEPIIRSILSQNGVGVLSASIIITLWSLSRVVSSIRIAQNGIYNVQANSVAI 141
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R IS + + ++ + V + I + + + P N++ I + + +L L
Sbjct: 142 FDRFISMFW----LIIILAIIGVLLIIASVGSNILEALPISSNIVYQIESAKRLVVILGL 197
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FIG + LP K +I+ IL G I + A F Y+ + T Y L+S +
Sbjct: 198 FIGAFLFNTLLPIKKPRIIWILIGTIIQITLVIWLAKAFGWYVNIAAQAFTFYQALSSAI 257
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+++ + + ++G + A + + +
Sbjct: 258 ILLLWINFIALASLIGTIITAILEELFPPR 287
>gi|16126083|ref|NP_420647.1| ribonuclease BN [Caulobacter crescentus CB15]
gi|221234853|ref|YP_002517289.1| ribonuclease BN [Caulobacter crescentus NA1000]
gi|13423279|gb|AAK23815.1| ribonuclease BN, putative [Caulobacter crescentus CB15]
gi|220964025|gb|ACL95381.1| ribonuclease BN [Caulobacter crescentus NA1000]
Length = 328
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 94/271 (34%), Gaps = 8/271 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ A+ D +S ALL+VFP + L + +
Sbjct: 36 ILRVLGLALSRLWGRDVMLYVGGVSFFALLAVFPGLAILIGLYSLFLTPETAAWQAVKLA 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + DE+ ++ P + + + + AY + G +AL L+ +
Sbjct: 96 ELIPSGARSIVQDELSRLAHAPGQTISLQSGVVLIVGAYAAHRGFKALLAGLSFIHDEEN 155
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L++ ++ A L IMS +F+ + L + A + + W
Sbjct: 156 QRGFLGFNLMALLVLMAAFGLLFIMSGIFLTLRLLGTALELRPLAGVSWIQSEWTW---- 211
Query: 185 TMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ +G+ V+ + + + + + G + V + Y+ Y
Sbjct: 212 ASFGIVVGMSLVYRYAMSRQIVGWRASIAGGVAAAALCVFMSWASAFYVEKVVHLGATYG 271
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
+++++ L++L G L + I
Sbjct: 272 SVSAVIIFLIWLSWSVNAIFFGGALATEVEI 302
>gi|270265252|ref|ZP_06193514.1| hypothetical protein SOD_l01020 [Serratia odorifera 4Rx13]
gi|270040886|gb|EFA13988.1| hypothetical protein SOD_l01020 [Serratia odorifera 4Rx13]
Length = 296
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 97/267 (36%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
+ + +A H++ +LLS+ P I L + + +F +
Sbjct: 23 LFQRVDNDGLTMLAGHLAYVSLLSLVPLITVVFALFAAFPMFSDISVQLKSFIFSNFMPA 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + Q +A K + + + + ++ LN +R R +
Sbjct: 83 AGNVIQSYLEQFVANSNK-MTAVGTCGLIVTALLLISSVDSVLNTIWRSKNKRPIVFSFA 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S + L+L ++ + + ++ ++ ++
Sbjct: 142 V-YWMVLTLGPLLVGASMAISSYLLSLNWLAQ-----TGVNSLVEQVLRIFPLILSWVSF 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G F YI F +Y +Y LA I +
Sbjct: 196 WLLYCIVPTVRVPPKDALIGALVAGVLFELGKKGFALYITMFPSYQLIYGVLAVIPILFL 255
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 256 WVYWSWCIVLLGAEITVTLGEYRDYRR 282
>gi|224823604|ref|ZP_03696713.1| ribonuclease BN [Lutiella nitroferrum 2002]
gi|224604059|gb|EEG10233.1| ribonuclease BN [Lutiella nitroferrum 2002]
Length = 403
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 89/274 (32%), Gaps = 10/274 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQF 58
+ +A ++ + LL++ P + + A
Sbjct: 3 LANRIEPYRGFARFLARRVGTHRVLQVAGSLTFTTLLALVPLLTIVLTVVAAFPVFADYS 62
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ ++ PE K IT + Q A+ L + S + + + N
Sbjct: 63 ARFKLMLLSTLVPEFAGKVITVYMRQFADN-AEKLTAAGIVMLGLTSLMLMSTIERTFNA 121
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ V R W ++ + L + F + ++ K L+
Sbjct: 122 IWSVRRSRPWLQQGMVYWS-------VLTLGPIAFGGGLIGWHWLLKATHFERYSRLLDE 174
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ + L ++ +P L G + T + V +F YI ++Y
Sbjct: 175 LLQRGGSIFLTTVVLSLLYRVVPNRFVPYRHALWGALATALLLEVTKAVFGFYIGEVASY 234
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y ASI L+++Y L + + GA AS+
Sbjct: 235 KLVYGAFASIPILLLWVYCLWLVVLTGAVFTASL 268
>gi|111023775|ref|YP_706747.1| hypothetical protein RHA1_ro06817 [Rhodococcus jostii RHA1]
gi|110823305|gb|ABG98589.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 390
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 79/210 (37%), Gaps = 5/210 (2%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
V+ + I + VL + ++S L + + S+ + S+ A+ E R
Sbjct: 98 SVVEQIIRPTVGDVLERGRPEIVSLSFLLSLWAGSSAISTFVDSIVEAHGQQEARHPVWQ 157
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLAL 189
R+ + ++ + V + P V + P + I+ L L
Sbjct: 158 RVFALLLYVMFLILAVFTLPLVALGPTL---VGRVLPEAWRTIGTEIVDTFYYPGVGLLL 214
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+GL ++ +L G + + ++ + Y+ + Y LA+ +
Sbjct: 215 IVGLTTLYKVALPRSLPWHRLLGGALVAGVFFLGASTCLRRYLSWVAGTGYTYGALATPI 274
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+F + LG +LGAE NA++ ++ +
Sbjct: 275 AFLLFTFFLGFAVVLGAEFNATVQEFWPAR 304
>gi|288927011|ref|ZP_06420905.1| YihY family protein [Prevotella buccae D17]
gi|288336220|gb|EFC74607.1| YihY family protein [Prevotella buccae D17]
Length = 446
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 8/263 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ +Y ++ F+ A +S S LL++ P + +A G ++ +
Sbjct: 32 LLRKVYLSLRFFIGRGHTDYAPSLSFSTLLAIVPVVAAVFAIAKGFGLAGYIEQWLHKAL 91
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ P+V+ I + + I L Y + + + + + ++V E RS
Sbjct: 92 TSQPQVVDWIIQLSNSYLDHAKTGVVIGIGILVMLYSVMSLIYNIESAFDDIWQVKEKRS 151
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W L + LA V L+++S + + + ++ + LL I I + L
Sbjct: 152 WNRVLLDYTSMLFLAPVVLILISGANIFVYGVVDSLQGYL-----LLGRITRLLIKVSPL 206
Query: 188 ALFIGLI-FVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L +++F+P + + S + PG I ++ + + + H + S+YS +Y
Sbjct: 207 VLTSAFFTLLYVFMPNTRVRFRSAVGPG-ILASVAMTLLQLFYVHSQLFLSSYSAIYGSF 265
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
A++ +++L + + AEL
Sbjct: 266 AALPLFMLWLLISWYICLFCAEL 288
>gi|113867329|ref|YP_725818.1| ribonuclease BN [Ralstonia eutropha H16]
gi|113526105|emb|CAJ92450.1| Ribonuclease BN [Ralstonia eutropha H16]
Length = 448
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 113/282 (40%), Gaps = 12/282 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
V + A+ E+ +++ ++ + +L+V P + L + I
Sbjct: 14 NLQKVRALARYALRRAGEDRLPQVSASLTFTTVLAVVPVLTVAFALLAAFPVFRDFRNAI 73
Query: 64 D--VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + P +++ I + + A A+GL + S + + +LN +R
Sbjct: 74 EAFLFQNLIPGNVSESIQRYL-GMFAKSARGLTAMGLGGLMVTSVLTMLTVEDALNAIWR 132
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R R++ F VL L+ S + ++++ +G + + +
Sbjct: 133 VKQRRP-LAQRVLVFWAVLTFGPVLIGASLSISSYLISVS-----AGYVGTMPVGLGLLV 186
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + F++ +P A + + + +++ F ++I Y+ +
Sbjct: 187 GATPVLLSALAFAFLYTAVPNAYVEWRDAIVAGLVAAVAFEFAKRGFGYFITEIPAYTAV 246
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY---YWRKK 280
Y A++ L+++Y+ + +LGA + A++ + YWR++
Sbjct: 247 YGTFAALPLFLLWIYLSWLVTLLGATIAANLPVIRQGYWRRR 288
>gi|318079567|ref|ZP_07986899.1| hypothetical protein SSA3_23484 [Streptomyces sp. SA3_actF]
Length = 263
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 44/239 (18%), Positives = 89/239 (37%), Gaps = 3/239 (1%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--L 93
+L++ P ++ + LG T+I + P + D + ++L A L
Sbjct: 1 MLALLPALLVTVVASALLG-PDTARTLIAYLTDYAPGQAGPQLHDLLTRMLTENATAWPL 59
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
+A + + + + R SL+R +R + R+ L LV+ + +
Sbjct: 60 IATGVFSAFWSACSYLAVFRRSLHRMHRTTDARTPVKRAHRIVLTALALLGLLVLTALLL 119
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
V + + + + L R A + + P + LPG
Sbjct: 120 VLSNPVVDAIGRALHLDEGVALAWRVLRWPALLCLVSGLAWVAFSNGPRIARRRRYSLPG 179
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ + W++ FT Y TYS +Y LA + L++L++ + + GA+ A +
Sbjct: 180 GVLATVLWLLATAGFTLYTSLIGTYSALYGSLAGSVVFLIWLWLSNLALLAGAQFAAEL 238
>gi|86146580|ref|ZP_01064902.1| ribonuclease BN [Vibrio sp. MED222]
gi|85835637|gb|EAQ53773.1| ribonuclease BN [Vibrio sp. MED222]
Length = 284
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 96/255 (37%), Gaps = 8/255 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKP 77
+ A +++ LLS+ P + ++ V VI + V +
Sbjct: 1 MTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSSFSVFADVGLVIQNFVITNFVPASGDA 60
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ +L+ +A + + ++ + + + +LN +RV E R ++ + +
Sbjct: 61 VHGALLEFVAN-TGKMTAVGSVFLFIAALMLISNIDKNLNYIWRVTEKRRAVLSFSM-YW 118
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
VL L+ S + +L ++ + ++ F ++
Sbjct: 119 MVLTLGPILIGASIAATSYVTSLNLLQNEV-----VSSAFNTVIRKLPLITSFFAFFGLY 173
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
L +P K G + + + + F YI F +Y +Y LA+I V++Y+
Sbjct: 174 LLVPNKKIHFSHAAAGSLVAALLFELSKKGFAAYITQFPSYQLIYGALAAIPILFVWVYL 233
Query: 258 LGVFFILGAELNASM 272
+ ++GAE+ A++
Sbjct: 234 CWLIVLVGAEVTAAL 248
>gi|313206524|ref|YP_004045701.1| ribonuclease bn [Riemerella anatipestifer DSM 15868]
gi|312445840|gb|ADQ82195.1| ribonuclease BN [Riemerella anatipestifer DSM 15868]
gi|315023535|gb|EFT36539.1| Ribonuclease BN [Riemerella anatipestifer RA-YM]
gi|325336028|gb|ADZ12302.1| Ribonuclease BN-related protein [Riemerella anatipestifer RA-GD]
Length = 302
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 99/275 (36%), Gaps = 10/275 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
M++ ++ I A + + A+ I+ A+ S+ ++ + G G F
Sbjct: 1 MKDNLKFYWETIRKAGADWSNSNADRDAAGIAYYAIFSIPGLLIILIWVMGIIFGDTNFQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNR 118
++ V E AK + ++ + + I + + ++ L+ SLN
Sbjct: 61 QKILQEVTKIMGEDTAKSLDGILISSMIDQDGIIMRIIGVVTLIFGATTLFFQLQKSLNE 120
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V + + R S G +L+ ++I + I L ++ +
Sbjct: 121 LWGVKAAPKKAILKFLVDRANSLGMILIIGFLMMITMILSTLIGLTNDFISQHLGLETYY 180
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ I N + ++ L L+F LP + S+ G T + +G L + Y
Sbjct: 181 IIQIINTLVGFLIVVLLFALMF--KVLPDVQLSWRSVWVGAFITAFLFTLGKSLLSLYFS 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
F S + S++ ++++ GA
Sbjct: 239 HFKPTSA-FGAAGSVILIMMWINYTCRLIFFGAVF 272
>gi|322435672|ref|YP_004217884.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
gi|321163399|gb|ADW69104.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
Length = 682
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 101/275 (36%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
+ + + + A ++ + +LS+FPFIV LA + V V D++
Sbjct: 409 WPQVKALAMYMASTEVHTYAFSVAANVILSLFPFIVLLLTLAQKVFHSPAMVAVVGDLLR 468
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + ++ P S + S+ L ++LN + V E R+
Sbjct: 469 TILPNN-QDFIVRNMTSLV-HPHGSTRVFSVVMLLITSTGVFLPLEVALNNVWGVKENRN 526
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG--RIYAT 185
+ +++S G + + ++ FF N+ G
Sbjct: 527 YLQNQMVSLGLAAAVGALAMASVALATGQQRITTWI--FFGHTDNIFFNFLAGGVLKICA 584
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ + ++ LP K M++LP I +SW V L+ + + ++Y
Sbjct: 585 VVMSVLLFFLIYWVLPHRKIPAMAVLPTAIVIGLSWEVAKYLYVLALPHLD-FESVYGPF 643
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++ ++ G+ + GA +A+ ++
Sbjct: 644 KVSVGLMMWAFLSGLMLLAGAHFSATRYTLRLARE 678
>gi|84386321|ref|ZP_00989349.1| ribonuclease BN [Vibrio splendidus 12B01]
gi|84378745|gb|EAP95600.1| ribonuclease BN [Vibrio splendidus 12B01]
Length = 284
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 96/255 (37%), Gaps = 8/255 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKP 77
+ A +++ LLS+ P + ++ V VI + V +
Sbjct: 1 MTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSSFSVFADVGLVIQNFVITNFVPASGDA 60
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ +L+ +A + + ++ + + + +LN +RV E R ++ + +
Sbjct: 61 VHGALLEFVAN-TGKMTAVGSVFLFIAALMLISNIDKNLNYIWRVTEKRRAVLSFSM-YW 118
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
VL L+ S + +L ++ + ++ F ++
Sbjct: 119 MVLTLGPILIGASIAATSYVTSLNLLQNEV-----VSSAFNTVIRKLPLITSFFAFFGLY 173
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
L +P K G + + + + F YI F +Y +Y LA+I V++Y+
Sbjct: 174 LLVPNKKIHFSHAAAGSLVAALLFELSKKGFAAYITQFPSYQLIYGALAAIPILFVWVYL 233
Query: 258 LGVFFILGAELNASM 272
+ ++GAE+ A++
Sbjct: 234 CWLIVLVGAEVTAAL 248
>gi|281424786|ref|ZP_06255699.1| YihY family protein [Prevotella oris F0302]
gi|281401156|gb|EFB31987.1| YihY family protein [Prevotella oris F0302]
Length = 439
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 102/258 (39%), Gaps = 6/258 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+Y AI F+E A+ +S S +L++ P + G +++ T + + P
Sbjct: 37 MYMAIRLFIERGHVDYATQLSFSTILAIVPIFAMIFAIGRGFGLSKYIETWLRSTLDSQP 96
Query: 72 EVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A+ I L GLF I L Y + + + N ++V RS
Sbjct: 97 -QAAESIISLADSYLQHAQTGLFIGIGLLFMLYSVLSLIYNVENVFNIIWQVERKRSVGR 155
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + L V +++MS V + +++ F LG + I+ + L
Sbjct: 156 FLADNLSMMFLVPVIIIVMSGVSIIANTTTDHLQAFI-ILGPIARIL---VKLLPFVVLT 211
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ I + + +P + K + + I I ++ + H + S Y+ +Y LA++
Sbjct: 212 LIFIALFVVMPNTRVKFSAAVGPAILAAILMLLVQWGYVHGQLFLSGYNAVYGSLAALPL 271
Query: 251 CLVFLYMLGVFFILGAEL 268
++++ + + AEL
Sbjct: 272 FMLWMQISWYICLFCAEL 289
>gi|194364102|ref|YP_002026712.1| ribonuclease BN [Stenotrophomonas maltophilia R551-3]
gi|194346906|gb|ACF50029.1| ribonuclease BN [Stenotrophomonas maltophilia R551-3]
Length = 314
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 103/274 (37%), Gaps = 29/274 (10%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ FVE D A+ +S ALLS+ P +V L L T+I + +
Sbjct: 35 VAKRFVEIDVLTQAASVSFYALLSMAPLLVLLLWLTASL-YPPAQQTLISQIGSVAGSSV 93
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYF-------SSNGVEALRISLNRAYRVVEMR- 126
A + + P ++ +LA + ++ L+ +LNR + R
Sbjct: 94 ASVADTVLHNANSQP-----SVGSLAGLWSTLLLFIGATAVFAQLQNALNRIFHTSGQRL 148
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+W R+ SFG VL L++ A+ + A + PA+G L ++
Sbjct: 149 EGVKAWLRKRVFSFGVVLALGFLLILSMTATTALQVVFAQLPSVLPAIGYLTSLLLYTL- 207
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
F++ +LP + G T + + +G YI T + S Y
Sbjct: 208 ---------AFAFLYHYLPDRRVAWRQAFIGGAITSVLFTLGRYGIGVYIATVAPGSA-Y 257
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +++ LV++Y F +GA + A +
Sbjct: 258 GSMGALVISLVWIYYATAVFFVGALMTAVIDERQ 291
>gi|299142048|ref|ZP_07035182.1| YihY family protein [Prevotella oris C735]
gi|298576510|gb|EFI48382.1| YihY family protein [Prevotella oris C735]
Length = 439
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 102/258 (39%), Gaps = 6/258 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+Y AI F+E A+ +S S +L++ P + G +++ T + + P
Sbjct: 37 MYMAIRLFIERGHVDYATQLSFSTILAIVPIFAMIFAIGRGFGLSKYIETWLRSTLDSQP 96
Query: 72 EVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A+ I L GLF I L Y + + + N ++V RS
Sbjct: 97 -QAAESIISLADSYLQHAQTGLFIGIGLLFMLYSVLSLIYNVENVFNIIWQVERKRSVGR 155
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + L V +++MS V + +++ F LG + I+ + L
Sbjct: 156 FLADNLSMMFLVPVIIIVMSGVSIIANTTTDHLQAFI-ILGPIARIL---VKLLPFVVLT 211
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ I + + +P + K + + I I ++ + H + S Y+ +Y LA++
Sbjct: 212 LIFIALFVVMPNTRVKFSAAVGPAILAAILMLLVQWGYVHGQLFLSGYNAVYGSLAALPL 271
Query: 251 CLVFLYMLGVFFILGAEL 268
++++ + + AEL
Sbjct: 272 FMLWMQISWYICLFCAEL 289
>gi|91224961|ref|ZP_01260220.1| ribonuclease BN [Vibrio alginolyticus 12G01]
gi|254228544|ref|ZP_04921969.1| tRNA-processing ribonuclease BN [Vibrio sp. Ex25]
gi|262392674|ref|YP_003284528.1| ribonuclease BN [Vibrio sp. Ex25]
gi|91190207|gb|EAS76477.1| ribonuclease BN [Vibrio alginolyticus 12G01]
gi|151938926|gb|EDN57759.1| tRNA-processing ribonuclease BN [Vibrio sp. Ex25]
gi|262336268|gb|ACY50063.1| ribonuclease BN [Vibrio sp. Ex25]
Length = 314
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 95/263 (36%), Gaps = 8/263 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
++ + A +++ LLS+ P + ++ V V+ +
Sbjct: 22 FFKYLLKRLTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFANVGEVLQGYIIEN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + + +A + + + + + +LN +RV + R
Sbjct: 82 FVPASGEAVHTALQEFVAN-TGKMSAVGGGFLFIAAVMLISNIDKNLNYIWRVKDKRRLV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + VL +V S + +L + L + +L
Sbjct: 141 FSFSM-YWMVLTLGPIMVGASIAATSYVTSLQILEN-----ETLSGAFNLFLRWLPLLLS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + +++ +P K + G I + + F YI F +Y +Y LA+I
Sbjct: 195 FFAFLGLYILVPNKKVHLAHGAMGAAVAAILFELSKKGFALYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + +LGAE+ A++
Sbjct: 255 ILFVWVYLCWMIVLLGAEVTAAL 277
>gi|254253674|ref|ZP_04946991.1| Ribonuclease BN [Burkholderia dolosa AUO158]
gi|124898319|gb|EAY70162.1| Ribonuclease BN [Burkholderia dolosa AUO158]
Length = 312
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 59/266 (22%), Positives = 101/266 (37%), Gaps = 13/266 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPE 72
+A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 22 NAFKRFSADRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGD 81
Query: 73 VIAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR---- 126
A I + A G+ T+ + AA +S +L +L+ + E R
Sbjct: 82 DAAASIQTIVQNAHRAGERGGIATLISFAALAVGASATFASLNTALSVIWPATESRWSSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ +V + + I +
Sbjct: 142 LGLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFVGTWLLGDSPYVAITNVLQFVVG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A G I + I + G LF Y+ T ++ +
Sbjct: 198 IAVLAAAFAALMKFLPDAHVAWHDAAIGGIVSAILFSGGKKLFALYLARAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY +LGAE A+
Sbjct: 257 GSFAVLLMWLYFSAAVLLLGAEFAAA 282
>gi|260770762|ref|ZP_05879691.1| ribonuclease BN [Vibrio furnissii CIP 102972]
gi|260613999|gb|EEX39189.1| ribonuclease BN [Vibrio furnissii CIP 102972]
Length = 284
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 94/255 (36%), Gaps = 8/255 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKP 77
V + A +++ LLS+ P + ++ + V V+ D V +
Sbjct: 1 MVHDRVNVNAGYLAYITLLSLVPMLTVLLSILSSFSIFENVGDVVQDYVITHFVPAAGDA 60
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + + + + + + + + +LN +RV + R + + +
Sbjct: 61 VRHALSEFVTN-TGKMTAVGGMFLFVAALTLISNIDKNLNYIWRVRKKRRMVFSFSM-YW 118
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+L LV S + +L + L +L F ++
Sbjct: 119 MILTLGPILVGASIALTSYITSLKLLDS-----EALTGAFNFFLRRLPLLLSFFAFAGLY 173
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
L +P K + + G + + + F YI F +Y +Y LA+I V++Y+
Sbjct: 174 LLVPNKKVHFLHAIAGAFVAALLFELSKKAFAAYITQFPSYQLIYGALAAIPILFVWVYL 233
Query: 258 LGVFFILGAELNASM 272
+ ++GAE+ A++
Sbjct: 234 CWLIVLIGAEVTAAL 248
>gi|170702800|ref|ZP_02893653.1| ribonuclease BN [Burkholderia ambifaria IOP40-10]
gi|170132288|gb|EDT00763.1| ribonuclease BN [Burkholderia ambifaria IOP40-10]
Length = 310
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 102/266 (38%), Gaps = 13/266 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPE 72
+A + F AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 22 NAFKRFSSHRCSAMAASIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGD 81
Query: 73 VIAKPITDEILQVL-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR---- 126
A I + A G+ T+ + AA +S +L +L+ + E R
Sbjct: 82 DAAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALSVIWPSTENRWSSM 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ + + I +
Sbjct: 142 LGLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFIGTWLLGDSPYVAITNVLQFVVG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + I + G LF Y+ T ++ +
Sbjct: 198 IAVLAAAFAVLMKFLPDARVAWHDAVIGGIVSAILFSGGKKLFALYLARAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
S L++LY +LGAE A+
Sbjct: 257 GSFAVLLMWLYFSAAVLLLGAEFAAA 282
>gi|304312329|ref|YP_003811927.1| tRNA-processing ribonuclease BN [gamma proteobacterium HdN1]
gi|301798062|emb|CBL46284.1| tRNA-processing ribonuclease BN [gamma proteobacterium HdN1]
Length = 422
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 104/267 (38%), Gaps = 2/267 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ +I+ A + + LLSV P + ++ LG H +
Sbjct: 26 QRILLRTSRVIFATGRDIAAGTLTLHAMSLVYTTLLSVVPLLALSFSVLKALGVHNELEP 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ F + + V + L ++ Y + ++ + S N ++
Sbjct: 86 LLFQFFSPLGPQGVQLAEQILGFVDNMKVGVLGSVGLATLVYTVVSLIQKIERSFNMIWQ 145
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V MRS R S+ V+L L++ + V + + V ++ + L +I
Sbjct: 146 VSRMRS-LPERFSSYLSVILIGPILMVAAIG-VTASIMNSSVVQYLIGVEPLGTLIIELA 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + + FV+ F+P + K + L + + W +LF +++V S Y +
Sbjct: 204 QFTPFLLVMVAFSFVYAFMPNTRVKFIPALMAGVIAGLIWQTVGMLFANFVVQSSKYEAV 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ A + L+++Y + ++GA L
Sbjct: 264 YSSFAIGIVMLIWIYTSWLILLIGATL 290
>gi|194289345|ref|YP_002005252.1| ribonuclease bn transmembrane protein [Cupriavidus taiwanensis LMG
19424]
gi|193223180|emb|CAQ69185.1| RIBONUCLEASE, putative RNase BN, TRANSMEMBRANE PROTEIN; besides
tRNAs maturation, its biological role is uncertain
[Cupriavidus taiwanensis LMG 19424]
Length = 448
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 113/282 (40%), Gaps = 12/282 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
V + A+ E+ +++ ++ + +L+V P + L + I
Sbjct: 14 NLQKVRALARYALRRAAEDRLPQVSASLTFTTVLAVVPVLTVAFALLAAFPVFRDFRNAI 73
Query: 64 D--VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + P +++ I + + A A+GL + S + + +LN +R
Sbjct: 74 EAFLFQNLIPGNVSESIQRYL-GMFAKSARGLTAMGLAGLMVTSVLTMLTVEDALNAIWR 132
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R R++ F VL L+ ++ ++ + +G + + +
Sbjct: 133 VKQRRP-LAQRVLVFWAVLTFGPVLIGA-----SLSISSYLISISAGYVGTMPMGLGLLV 186
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A +L + F++ +P A + + + +++ F ++I Y+ +
Sbjct: 187 GAAPVLLSALAFAFLYTAVPNAYVEWRDAIVAGLVAAVAFEFAKRGFGYFITEIPAYTAV 246
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY---YWRKK 280
Y A++ L+++Y+ + +LGA + A++ + YWR++
Sbjct: 247 YGTFAALPLFLLWIYLSWLVTLLGATIAANLPVIRQGYWRRR 288
>gi|288559255|sp|Q0VPA7|Y1543_ALCBS RecName: Full=UPF0761 membrane protein ABO_1543
Length = 429
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 40/280 (14%), Positives = 101/280 (36%), Gaps = 7/280 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F + + F E+ A+ ++ + L ++ P + + + A Q
Sbjct: 11 QARFNSIKAFFVLLVRQFNEDGCRQSAAALTYTTLFAIVPVMTVSFVVLSSVPALQGKSA 70
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + F + + D + A A L + + S + + +LNR +
Sbjct: 71 QLQEWAFEYFVPSAGNMLLDHLQS-FAKQATNLTVLGIVFLVVTSVLMLSTVEQTLNRIW 129
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V R ++ L+ + + L + L + + + + F + L +
Sbjct: 130 KVQTPRKGLVSLLMYWALLSLGPICLGLGLAITSYLTS-----QAIFSDTVSYLGGVRLW 184
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L L ++ +P + G + + + FT +I +Y
Sbjct: 185 LAVLPFLFTTAMLTLMYTVVPNTTVPFRQGVLGAAMAALLFELAKGAFTFFIKQAPSYQV 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++Y+ + GAEL +++++ ++
Sbjct: 245 VYGAFAAVPVFLLWIYISWTIVLGGAELVRALVVFQEHQR 284
>gi|157373109|ref|YP_001481098.1| ribonuclease BN [Serratia proteamaculans 568]
gi|166918692|sp|A8GLI0|Y4878_SERP5 RecName: Full=UPF0761 membrane protein Spro_4878
gi|157324873|gb|ABV43970.1| putative ribonuclease BN [Serratia proteamaculans 568]
Length = 296
Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
I+ + +A H++ +LLS+ P + L + + +F +
Sbjct: 23 LIKRVDSDGLTMLAGHLAYVSLLSLVPLVTVVFALFAAFPMFSDISVQLKSFIFSNFMPA 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + Q +A K + + + + ++ LN +R R +
Sbjct: 83 AGNVIQSYLEQFVANSNK-MTAVGTCGLIVTALLLISSVDSVLNTIWRSKNKRPIVFSFA 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S + L+L ++ + + ++ ++ +I
Sbjct: 142 V-YWMVLTLGPLLVGASMAISSYLLSLNWLAQ-----SGVNSLVDQVLRIFPLILSWISF 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G F YI F +Y +Y LA I +
Sbjct: 196 WLLYCIVPTVRVPPKDALIGALVAGVLFELGKKGFALYITMFPSYQLIYGVLAVIPILFL 255
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 256 WVYWSWCIVLLGAEITVTIGEYRDYRQ 282
>gi|295134558|ref|YP_003585234.1| ribonuclease BN-like family protein [Zunongwangia profunda SM-A87]
gi|294982573|gb|ADF53038.1| ribonuclease BN-like family protein [Zunongwangia profunda SM-A87]
Length = 338
Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 112/284 (39%), Gaps = 10/284 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVP 60
+ F ++ A + + + ++ ++ I+ AL S+ ++ +AG+
Sbjct: 9 KAIKSFFKLMARAFTSWNKNEPYSRSATIAYYALFSLPSLLIIVVTIAGYFLGSRTTVQD 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + A + I L+ + + ++ L++++N
Sbjct: 69 RITSEISRFIGGDTANAVEGMISSAWLSEDSTFAIIFGVGMLLFGATGVFVQLKLAMNNI 128
Query: 120 YRVVEMRSWYIT----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ V E R+ + R ISFG +L+ + L++ + + L ++ P + +L
Sbjct: 129 WNVAEKRNNFWGLLLDRAISFGMILVVGLLLLVSLVISALLNLIKDSIQLSAPHITGAVL 188
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I N + L + + + LP K K + G T I +++G L + Y T
Sbjct: 189 SIANF--IISFLVITSLFMAIFKILPDIKIKWRTTFWGASLTTILFLIGYYLISFYFGT- 245
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S +++Y G +S++ L+++Y + GAE + K
Sbjct: 246 SDPTSVYGGASSVVLILLWVYYACMIMFYGAEFTVQYALVKNEK 289
>gi|298386552|ref|ZP_06996108.1| ribonuclease [Bacteroides sp. 1_1_14]
gi|298260929|gb|EFI03797.1| ribonuclease [Bacteroides sp. 1_1_14]
Length = 310
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 104/273 (38%), Gaps = 10/273 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + F II D ++ FV+++ +++ ++ + L S+ P + FL
Sbjct: 8 KQKLSLAFKIIKDTVQGFVDDNVMRLSASLAYATLFSIIPLFSLLITIGVFLQID-LTDQ 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALA-AAYFSSNGVEALRISLNRAY 120
+ + + + + I TI ++ + ++ ++ SLN +
Sbjct: 67 LYTQIEPVVGPKVVEALRSIIENATEADVSSFATIISVGVTIFSATTVFAEIQSSLNTIW 126
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + RL+SF +L+ + L+I + I P + L+
Sbjct: 127 GIKAVPRKSWLKYIKNRLLSFSVILVFAFILLITFTITNLITDLSNRYIANNPDVAESLV 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ I+ ++ I + LP AK K + G + T + + G + YI
Sbjct: 187 KVIG--IFVNIVVTTIIFTLIFKILPDAKIKSKDVFIGALVTTVLLLAGQWGISFYIA-I 243
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ T+Y A + ++++Y + GAE
Sbjct: 244 ANIETVYGAAAFMAIFIIWIYYSAIIIYTGAEF 276
>gi|317504378|ref|ZP_07962362.1| YihY family protein [Prevotella salivae DSM 15606]
gi|315664500|gb|EFV04183.1| YihY family protein [Prevotella salivae DSM 15606]
Length = 439
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/257 (19%), Positives = 105/257 (40%), Gaps = 4/257 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
IY A++ F+E A+ +S S +L++ P + G Q++ T + G+ P
Sbjct: 37 IYMAVKLFIERGHVDYATQLSFSTILAIVPIFALIFAIGRGFGLSQYIETWLRTSLGSQP 96
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E I + I L Y + + + N ++V RS
Sbjct: 97 EAANSIIALADSYLQHAQTGLFIGIGLLFMLYSVLSLIYNVESVFNIIWQVNTKRSIGRF 156
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + L V +++MS V + +++ FF LG + ++ + + + +F+
Sbjct: 157 LSDNLAMMFLVPVIIIVMSGVSIIANTTTEHLQTFF-LLGPIARVVVSLLPFVVLTLIFV 215
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L V +P + K +++ I I+ ++ + H + S Y+ +Y LA++
Sbjct: 216 ALFMV---MPNTRVKFTAVVGPAILAAIAMLLVQWGYVHGQLFLSGYNAVYGSLAALPLF 272
Query: 252 LVFLYMLGVFFILGAEL 268
++++ + + AEL
Sbjct: 273 MLWMQISWYICLFCAEL 289
>gi|95928810|ref|ZP_01311556.1| ribonuclease BN, putative [Desulfuromonas acetoxidans DSM 684]
gi|95135155|gb|EAT16808.1| ribonuclease BN, putative [Desulfuromonas acetoxidans DSM 684]
Length = 437
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/261 (18%), Positives = 109/261 (41%), Gaps = 9/261 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ A+ F + A+ ++ + LL++ P + L LG H + ++
Sbjct: 32 RVLAAALIGFRRHNCIQHAAALTFNTLLALIPLLAIMFALLKGLGVHNTIEPMLLKQLSV 91
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
E + + + I + L ++ + + + + S N ++V E RS +
Sbjct: 92 GSEEV---VANIITYINNTNVGRLGSVGLVMLVFTVLALLSNIEKSFNDLWQVQETRSLF 148
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNGRIYATML 187
R + V+ V+ + + V+ P G+ LL+++
Sbjct: 149 R-RFADYFSVVTLGPLFVLAAVSMNTSIRSQHVVQWLLSKPVFGDALLLLFE---VLPFF 204
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A++ IF+++F+P K K++S L G I W++ + ++ Y+ +Y +A+
Sbjct: 205 AIWAAFIFLYMFVPNTKVKLVSALVGGISAGSLWLLTQWAYINFQYGVGKYNAIYGTMAA 264
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
+ +++LY+ + +LG EL
Sbjct: 265 LPIFMIWLYVSWMITLLGVEL 285
>gi|269964595|ref|ZP_06178834.1| tRNA processing ribonuclease BN [Vibrio alginolyticus 40B]
gi|269830722|gb|EEZ84942.1| tRNA processing ribonuclease BN [Vibrio alginolyticus 40B]
Length = 314
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 95/263 (36%), Gaps = 8/263 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
++ + A +++ LLS+ P + ++ V V+ +
Sbjct: 22 FFKYLLKRLTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFANVGEVLQGYIIEN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + + +A + + + + + +LN +RV + R
Sbjct: 82 FVPASGEAVHTALQEFVAN-TGKMSAVGGGFLFIAAVMLISNIDKNLNYIWRVKDKRRLV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + VL +V S + +L + L + +L
Sbjct: 141 FSFSM-YWMVLTLGPIMVGASIAATSYVTSLQILEN-----ETLSGAFNLFLRWLPLLLS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + +++ +P K + G I + + F YI F +Y +Y LA+I
Sbjct: 195 FFAFLGLYILVPNKKVHLAHGAMGAAVAAILFELSKKGFALYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + +LGAE+ A++
Sbjct: 255 ILFVWVYLCWMIVLLGAEVTAAL 277
>gi|308270567|emb|CBX27179.1| hypothetical protein N47_A12080 [uncultured Desulfobacterium sp.]
Length = 445
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 101/268 (37%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R II A + FV + AS ++ +LLSV P + +A + +
Sbjct: 30 LRRILIKHLRIIIIASKEFVYDKCPLRASALTYYSLLSVVPVVAMAFAIAKGFKLQELLE 89
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I F ++ + I + + + + + N + + + N
Sbjct: 90 AEIIEKFSGQEAMMMQIIEFSRNMLKDTKGGIIAGVGVVVLLWAVINVLSQIEDTFNDIS 149
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS+ +L+ + L++ V I L + + LG ++
Sbjct: 150 GVKKGRSFGRKFSDYLSLILIGPLLLIMSGSAMVLISTHLPQITQKIALLGIFSPLVAII 209
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++I F+++F+P K S L I +V+ L+ + + + Y+T
Sbjct: 210 IKVLPYCFIWILFTFIYIFMPNQKVPFFSGLIAGIAAGTIFVIVQKLYIFFQIGVAKYNT 269
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++ + + GAE+
Sbjct: 270 VYGSFAALPLFLLWMQLSWFIMLFGAEI 297
>gi|294669009|ref|ZP_06734095.1| YihY family protein [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291309001|gb|EFE50244.1| YihY family protein [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 421
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 95/266 (35%), Gaps = 9/266 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+F + F E D +++ ++ + LL++ P + + + +VI+++
Sbjct: 15 LFGFARFLYQRFNEVDVPQVSASLTFTTLLALVPVLTVALVILSAFPVFNDLSSSVIELI 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G A + + A L I + + + + + NR +R + R
Sbjct: 75 DGYLVPKGADAVRGYLATFQNN-AGNLTAIGIVFLGVTAVMLIRTIDQTFNRIWRAQDRR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L+ + L A + + L+ + +
Sbjct: 134 PLWTQ-------FLVYWMLLTFAPLAIGAGLSVWELLLRHQAWANQDTLLSEVIKTVGGL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L ++ +P L G T + + F Y+ TF++Y+ +Y A
Sbjct: 187 VMNAAALWLLYRVVPNRYVPARHALIGAALTAVLLDLAQRGFGWYVGTFNSYTLIYGAFA 246
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
+I L++L +L + + GA L AS+
Sbjct: 247 AIPVFLIWLNLLWMLLLTGAVLTASL 272
>gi|171914030|ref|ZP_02929500.1| hypothetical protein VspiD_22665 [Verrucomicrobium spinosum DSM
4136]
Length = 319
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 98/268 (36%), Gaps = 11/268 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVV 66
++ A ++++D +++ ++ A S P ++ +LA F G ++ +
Sbjct: 6 FLSLLRTAAREWIDDDASRLSAALAYYATFSTAPLLIICISLASFVFGEQAARGQIVAEI 65
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
E I IL G + + ++ L+ +LN + VV
Sbjct: 66 SSLAGEDAGHSIQAFILDASQNDHNGWKALLGVAVLLFGATRVFAELKGALNAIWGVVPR 125
Query: 126 RS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ +SF VL+ L+ V A+ A Y ++ P LL G
Sbjct: 126 PGQQVLTLLRDQFLSFSMVLVIGFLLLSSLLVSTAVAAATRYFGQWVPMHPELLGW---G 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +++ + + + LP + G + T + +G + Y+ T + ++
Sbjct: 183 DMGLSLVVISVLFALILKLLPDVHVGWGDVWLGAVVTAGLFNIGKHAISVYLGT-TGVAS 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y SI+ L+++Y GAE
Sbjct: 242 SYGAAGSIVVLLLWVYYSSCILFYGAEF 269
>gi|148262616|ref|YP_001229322.1| putative ribonuclease BN [Geobacter uraniireducens Rf4]
gi|146396116|gb|ABQ24749.1| putative ribonuclease BN [Geobacter uraniireducens Rf4]
Length = 329
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 110/271 (40%), Gaps = 6/271 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVV 66
+F + + F G+ ++ ++ LLSV P I+ L+ +G + V T+ +
Sbjct: 45 LFGFLLSVVRDFRRNQGFLLSGAVAYYTLLSVVPMSILALTALSHVIGEDELVHTLATYL 104
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR---VV 123
P A ++V + + +I L +FSS L +++ + +
Sbjct: 105 ELVIPGYAATLTEQ--VRVFVENRQVIGSIGFLVMLFFSSIAFTVLENAISVIFYHHVLT 162
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + ++ LI F Y+ +V +V++S + A+ F +L
Sbjct: 163 KRRKFIVSALIPFLYISALAVGIVLVSVIVGAVETLENRHLIMFGRSLSLAGTTRVALYV 222
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + L +L +P + + G I T + W + + Y + S + +Y
Sbjct: 223 LGIGGEMLMLTSFYLVMPVVRITFRHAVIGGIITTVLWEIARRVLVWYYASLSMVNVIYG 282
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
+A+++ L+ + + + +LGA++ A +
Sbjct: 283 SIATVVVTLLSIEVSALILLLGAQVIAELER 313
>gi|333030451|ref|ZP_08458512.1| ribonuclease BN [Bacteroides coprosuis DSM 18011]
gi|332741048|gb|EGJ71530.1| ribonuclease BN [Bacteroides coprosuis DSM 18011]
Length = 439
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 106/268 (39%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I+ FV++ A AS ++ S LL++ P + +A G + + T
Sbjct: 28 KFSLYNIIKTIYVTIKQFVDDRIAAKASALTYSTLLAIVPMLAILFAIARGFGFDKLMET 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
+ FG E + I + L G+F + + N + + ++ N +
Sbjct: 88 QLFANFGGQTETT-EAILTFVDSYLEHAKGGIFIGVGLAMLLWTVLNLINNIEVTFNHIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V + R+ Y F LL + +V S V + + A + + LG+L +
Sbjct: 147 QVKKSRNMYRKITDYFSMFLLMPILIVFSSGVTLFMSTVFAKMEDYI-LLGSLSKFLIKL 205
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+A +F G +++F+P + LP I + + + S Y+
Sbjct: 206 IPFAITWLMFTG---LYVFMPNTNVRFKHALPAGILAGTIYQFFQFFYISGQIWVSKYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L++L + G +L
Sbjct: 263 IYGSFAALPLFLLWLQTSWTICLFGVQL 290
>gi|302538933|ref|ZP_07291275.1| ribonuclease BN [Streptomyces sp. C]
gi|302447828|gb|EFL19644.1| ribonuclease BN [Streptomyces sp. C]
Length = 326
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 87/272 (31%), Gaps = 4/272 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG++ + ++L +LS+ P + L+ L +
Sbjct: 42 WSLVRDSFIRFRYADGFSHSRALALQTVLSIVPLAIAVIGLSSTLHTEDIGRVAELTIRS 101
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL---RISLNRAYRVVEM 125
+ + + Q G L + N AL NR Y
Sbjct: 102 LASGPSRHVVDEALAQSRHRAGDGGLLALWLGLLFSVVNVTTALCQVERGANRIYGTERD 161
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + +LA + L + V V V + + + R
Sbjct: 162 RPFLSKYGRGLLMSVLAGLPLGLSFAVTVLGAHLSRAVAEVYHLGAGTIRAWDLLRWPVG 221
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + V P + L G + W+ + Y+ +++++Y
Sbjct: 222 VLLALLATSAVFRLSPRRAQPGYTWLAFGATVYLVLWLTATWGLSAYVGAGGSFASVYGP 281
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L++ ++ L++ Y+ + LG A +
Sbjct: 282 LSAFVSLLLWSYLTSLALFLGLAFAAQLEAVR 313
>gi|183982020|ref|YP_001850311.1| hypothetical protein MMAR_2006 [Mycobacterium marinum M]
gi|183175346|gb|ACC40456.1| conserved membrane protein [Mycobacterium marinum M]
Length = 324
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 106/277 (38%), Gaps = 15/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ I + ++ ++ ++ + LS+ P ++ ++ F +
Sbjct: 11 HHIWRISLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVA-PLFGQDTLPA 69
Query: 66 VFGAW---------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ P V+ + I I + A + ++ L + + S+ + + ++
Sbjct: 70 IEKTIISMTHRFFSPSVVDEIIEPTIRDITANARGEVVSVGFLISLWAGSSAISSYVDAI 129
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
A+ +R R + ++ + +VI + V V P V + P N+ +
Sbjct: 130 VEAHDQTPLRHPVRQRFFALFLYVVGLLFIVISAPVAVMGP---RKVSEHIP--DNMSNL 184
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ G A + L +G+I ++ ++ G + +++ + Y+ +
Sbjct: 185 MHYGYYPALIAVLTVGVIILYRVSLPVPLPTHRLILGAVLAMAVFLIATLGLRFYLGWIT 244
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y L++ + L+F + G ++GAELNA++
Sbjct: 245 HTGYTYGALSTPIAFLLFAFFGGFAVMIGAELNAAIQ 281
>gi|148976521|ref|ZP_01813217.1| ribonuclease BN [Vibrionales bacterium SWAT-3]
gi|145964097|gb|EDK29354.1| ribonuclease BN [Vibrionales bacterium SWAT-3]
Length = 285
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 97/256 (37%), Gaps = 10/256 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKP 77
+ A +++ LLS+ P + ++ V VI + + +
Sbjct: 1 MTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSSFSVFADVGIVIQNFIITNFVPASGDA 60
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ +L+ +A + + ++ + + + +LN +RV E R +
Sbjct: 61 VHGALLEFVAN-TGKMTAVGSVFLFIAALMLISNIDKNLNYIWRVTEKR-------RAVL 112
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-FIGLIFV 196
+ + L + + A A +YV ++ +N I L L F +
Sbjct: 113 SFSMYWMVLTLGPILVGASIAATSYVTSLSLLQNEVVSGAFNTLIRKLPLILSFFAFFGL 172
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+L +P K G + + + + F YI F +Y +Y LA+I V++Y
Sbjct: 173 YLLVPNKKIHFSHAAAGSLVAALLFELSKKGFAAYITQFPSYQVIYGALAAIPILFVWVY 232
Query: 257 MLGVFFILGAELNASM 272
+ + ++GAE+ A++
Sbjct: 233 LCWLIVLVGAEVTAAL 248
>gi|15642735|ref|NP_232368.1| ribonuclease BN [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121586586|ref|ZP_01676371.1| YihY family protein [Vibrio cholerae 2740-80]
gi|121726682|ref|ZP_01679907.1| YihY family protein [Vibrio cholerae V52]
gi|147674039|ref|YP_001218229.1| ribonuclease BN [Vibrio cholerae O395]
gi|153817436|ref|ZP_01970103.1| YihY family protein [Vibrio cholerae NCTC 8457]
gi|153821261|ref|ZP_01973928.1| YihY family protein [Vibrio cholerae B33]
gi|227082856|ref|YP_002811407.1| ribonuclease BN [Vibrio cholerae M66-2]
gi|229507211|ref|ZP_04396716.1| ribonuclease BN [Vibrio cholerae BX 330286]
gi|229509868|ref|ZP_04399349.1| ribonuclease BN [Vibrio cholerae B33]
gi|229516989|ref|ZP_04406435.1| ribonuclease BN [Vibrio cholerae RC9]
gi|229606717|ref|YP_002877365.1| ribonuclease BN [Vibrio cholerae MJ-1236]
gi|254851279|ref|ZP_05240629.1| tRNA-processing ribonuclease BN [Vibrio cholerae MO10]
gi|255743715|ref|ZP_05417674.1| ribonuclease BN [Vibrio cholera CIRS 101]
gi|262158589|ref|ZP_06029704.1| ribonuclease BN [Vibrio cholerae INDRE 91/1]
gi|262170018|ref|ZP_06037707.1| ribonuclease BN [Vibrio cholerae RC27]
gi|298500444|ref|ZP_07010248.1| YihY family protein [Vibrio cholerae MAK 757]
gi|32699651|sp|Q9KNJ6|Y2742_VIBCH RecName: Full=UPF0761 membrane protein VC_2742
gi|172047528|sp|A5F4Q8|Y3514_VIBC3 RecName: Full=UPF0761 membrane protein VC0395_A2314/VC395_2854
gi|254789782|sp|C3LSG9|Y2662_VIBCM RecName: Full=UPF0761 membrane protein VCM66_2662
gi|288559223|sp|C3NUE6|Y1626_VIBCJ RecName: Full=UPF0761 membrane protein VCD_001626
gi|9657340|gb|AAF95881.1| ribonuclease BN [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121549145|gb|EAX59178.1| YihY family protein [Vibrio cholerae 2740-80]
gi|121630843|gb|EAX63225.1| YihY family protein [Vibrio cholerae V52]
gi|126512022|gb|EAZ74616.1| YihY family protein [Vibrio cholerae NCTC 8457]
gi|126521193|gb|EAZ78416.1| YihY family protein [Vibrio cholerae B33]
gi|146315922|gb|ABQ20461.1| yihY family protein [Vibrio cholerae O395]
gi|227010744|gb|ACP06956.1| ribonuclease BN [Vibrio cholerae M66-2]
gi|227014628|gb|ACP10838.1| ribonuclease BN [Vibrio cholerae O395]
gi|229346052|gb|EEO11024.1| ribonuclease BN [Vibrio cholerae RC9]
gi|229353342|gb|EEO18281.1| ribonuclease BN [Vibrio cholerae B33]
gi|229354716|gb|EEO19637.1| ribonuclease BN [Vibrio cholerae BX 330286]
gi|229369372|gb|ACQ59795.1| ribonuclease BN [Vibrio cholerae MJ-1236]
gi|254846984|gb|EET25398.1| tRNA-processing ribonuclease BN [Vibrio cholerae MO10]
gi|255738645|gb|EET94031.1| ribonuclease BN [Vibrio cholera CIRS 101]
gi|262021426|gb|EEY40138.1| ribonuclease BN [Vibrio cholerae RC27]
gi|262029750|gb|EEY48399.1| ribonuclease BN [Vibrio cholerae INDRE 91/1]
gi|297540613|gb|EFH76670.1| YihY family protein [Vibrio cholerae MAK 757]
Length = 297
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 102/274 (37%), Gaps = 10/274 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
VI D V + + + +++ +A + + + + + +LN
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYI 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + L + + A A +Y+ L ++N
Sbjct: 127 WRVQQKR-------RAVFSFSMYWMILTLGPILVGASIAATSYITSLKILDNEALSGVYN 179
Query: 180 -GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 180 LFLRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 240 QLIYGALAAIPILFVWVYLCWLIVLVGAEVTAAL 273
>gi|329889838|ref|ZP_08268181.1| ribonuclease BN-like family protein [Brevundimonas diminuta ATCC
11568]
gi|328845139|gb|EGF94703.1| ribonuclease BN-like family protein [Brevundimonas diminuta ATCC
11568]
Length = 309
Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 91/272 (33%), Gaps = 6/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ A D +S ALL++FP I + V
Sbjct: 12 RLWLRLMTRAFSRSWGRDVMLYTGGVSFFALLALFPAIAILIGFYKAVLTIGQVSEQAAA 71
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRV 122
+ P +EI ++ A+ + I+ + AY + G +AL LN +
Sbjct: 72 LADVIPSAARTLFLNEIDRLANASARTVSAQSAIALVIGAYAAHRGFKALLAGLNLIHDE 131
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
++ +++F L A V I+S V L + L + +G
Sbjct: 132 TNPLGFFKFNMLAFLVALAAFVLFTIVSGAVVTSRL---MEHAYADQPVGWLALPLDGLW 188
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A L L + +++ + A + + + G + + + L T Y+ Y
Sbjct: 189 PALGLWLGLTMLYRYAMAHAKRVAWKAAIIGGLVATVMSTFFSWLCTIYVEQIVHLGATY 248
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ +++ L++L G + I
Sbjct: 249 GSVGAVVVLLIWLSWNVNAVFYGGAFATELEI 280
>gi|68536347|ref|YP_251052.1| hypothetical protein jk1267 [Corynebacterium jeikeium K411]
gi|68263946|emb|CAI37434.1| putative membrane protein [Corynebacterium jeikeium K411]
Length = 389
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 98/284 (34%), Gaps = 18/284 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
I + + +S LL+ P ++ + + +Q + +
Sbjct: 52 IAKRLYFEIFYNALFDKGATLSFFTLLTGLPTLLAFYAITTLVLDQNRNQVTALTDEFIA 111
Query: 68 GAWPEVIAKPITDEILQVL--AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ + V+ + + IS L A + SS V A N Y E
Sbjct: 112 ENIPDNFQSNAQTVVNTVIGSTEQSITMLVISVLFALFSSSAYVRAFSRMANEMYGRREG 171
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVF-----VAIPLALAY-----VRKFFPALGNLLL 175
RS T +G L+ + LV ++ + +A PL + F + L
Sbjct: 172 RSLVRTWAAMWGITLVLVIGLVFIAGAYFLREDIARPLLDKITEPLNWQGFTTFVLEHFL 231
Query: 176 IIWN-GRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
IW R L I + ++ P + +I + G F IS + +L Y+
Sbjct: 232 PIWQYVRWPVIFLVAVILIAILYNGAPNVRFGRIRWLTVGSAFALISITIVGLLLQVYLN 291
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F Y +Y L I+ L+ L + +LG +L+A +
Sbjct: 292 NFG-YVGLYGALGGIIVGLIGLVVSNSLLLLGVKLDAEIARTRE 334
>gi|145295109|ref|YP_001137930.1| hypothetical protein cgR_1052 [Corynebacterium glutamicum R]
gi|140845029|dbj|BAF54028.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 368
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 106/281 (37%), Gaps = 24/281 (8%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVFG 68
+ + + +A+ ++ ++LS+ P ++ G ++ + + + V D V
Sbjct: 44 LNRTVRDVFPDGLLDLAALLTFFSILSIAPAVLLGYSVITIFLASDSTEILNLVRDEVNQ 103
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE + + I + A G + + A + SS V A N Y E R
Sbjct: 104 YVPEDQSHVVNGVIDSIAGSAAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRSEGR 163
Query: 127 SWYITRLISFGYVLLASV-------------TLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ + L + TLV+ F +A PL ++ L +
Sbjct: 164 TLIKRWAMLLFLNLALLLGIIIILVSWVLNETLVMGIFAPIAEPL---HLTNVLSFLTDR 220
Query: 174 LLIIWNG-RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHY 231
+ IW R + L + + ++ + P A+ K + G + ++ V Y
Sbjct: 221 FMPIWMWVRFPVIVGVLIMFVATLYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFY 280
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F+ +S+ Y + S++ + L++ + I+G +++ +
Sbjct: 281 FTLFAAFSS-YGAVGSLLAVFIALWVFNICLIIGLKIDVEI 320
>gi|319792501|ref|YP_004154141.1| ribonuclease bn [Variovorax paradoxus EPS]
gi|315594964|gb|ADU36030.1| ribonuclease BN [Variovorax paradoxus EPS]
Length = 403
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 97/258 (37%), Gaps = 11/258 (4%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E F E+ AS ++ + +++ PF L + + ++ PE I
Sbjct: 28 ERFREDRLGLTASSLTFTTTIAMVPFFTVALALFTVFPMFAKMQGRLQRWLIESLIPENI 87
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q A A GL + + + + +LN +RV R + LI
Sbjct: 88 ARQVLGYLNQ-FASKASGLGIAGLIVLLITAIALILTIDKTLNNIWRVRTPRPFAQRVLI 146
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + + A + V ++ L +G+
Sbjct: 147 YWAAITLGPLILAVSLSTTSYVVSATSDVVGR--------GMVKLFFDTFEFALLAVGMA 198
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G IF + + + +Y+ TYS +Y A+ LV+
Sbjct: 199 SLYHYVPNTNVRWSHAWAGGIFVAAAIEIAKRVLAYYLSLVPTYSVLYGAFATFPILLVW 258
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 259 IYVAWVIVLLGAVIAAYL 276
>gi|73538237|ref|YP_298604.1| ribonuclease BN [Ralstonia eutropha JMP134]
gi|72121574|gb|AAZ63760.1| Ribonuclease BN [Ralstonia eutropha JMP134]
Length = 427
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 116/267 (43%), Gaps = 12/267 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFG 68
++ ++I ++++ +M + ++ + S+ P ++ ++AG G V+ + G
Sbjct: 20 QLVRESINSWIDDYAPSMGAALAYYTVFSIAPLLMIVISIAGVIFGPDAARGEVVGELNG 79
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVVEMR- 126
A+ + + ++ V A + I + A + V + L+ +L+R +RV +
Sbjct: 80 LIGSEGAQAVEEMLVAVSKPAASTVTAILGVLALLVGATTVFSELQSALDRIWRVPQPEK 139
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
S +RL+SFG +L LV+ + I A R++ P LG +
Sbjct: 140 ISGLFSLIRSRLLSFGMILGMGFLLVVSLLLSAGIS---AMGREWGPLLGIREAVGHVLD 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++ + ++ F+P K + + G + T + +G L YI S ++
Sbjct: 197 TVVSLVLTTVVFAMIYKFMPRTKVRWFDVWLGAVVTAALFTLGKFLIGLYIGK-SGVASG 255
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y S++ L+++Y F+LGAE
Sbjct: 256 YGAAGSLVVLLLWVYYAAQIFLLGAEF 282
>gi|317153119|ref|YP_004121167.1| ribonuclease BN [Desulfovibrio aespoeensis Aspo-2]
gi|316943370|gb|ADU62421.1| ribonuclease BN [Desulfovibrio aespoeensis Aspo-2]
Length = 474
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 109/267 (40%), Gaps = 6/267 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPT 61
+ V + Y + F ++ A+ ++ + +LS+ PF+ +++ G
Sbjct: 34 RLWRSVSRLFYLVVFGFAKDQCIIRAAALTFTTILSIVPFLAVAFSISKGFGLQNTEFIR 93
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + E +A I + I + + L + + + V + + N +
Sbjct: 94 TLVLKLTTGREEVADKIIEYIDR---TNVQALGWVGVATLLFTVLSLVGTIEKAFNTIWG 150
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS + R ++ + ++ +V++ + L + ++ + L+
Sbjct: 151 VTKGRSAW--RKVTDFFPVIVICPMVLLIASSFNLSLQQQEIVTGLLSVKAIGLLEAAFL 208
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + F++ F+P K ++ S + G + + W + L+ H+ + + Y+ +
Sbjct: 209 KATPYILISMAFAFMYAFIPHTKVRLTSAVLGGVVGGVLWQMAQWLYIHWQIGAAKYNAI 268
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A + L+++Y+ + +LG E+
Sbjct: 269 YGSFAQLPLLLMWIYISWLVVLLGCEV 295
>gi|240948865|ref|ZP_04753221.1| ribonuclease BN [Actinobacillus minor NM305]
gi|240296680|gb|EER47291.1| ribonuclease BN [Actinobacillus minor NM305]
Length = 284
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 105/282 (37%), Gaps = 13/282 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M+ + F + I+ + A +++ + +L++ P I+ ++ +
Sbjct: 1 MKYTLLLFFRVF---IKRAEQNQLPVTAGYLTYNTMLAMVPLIMVVFSVFTIFPFFTEAT 57
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ ++ + I + + + +K + +S + + + + +LN
Sbjct: 58 EQLKSFIYDNFAPNIGDVVQQNLDSFVNN-SKQMGIVSTIGLVVVALMLIHNVDKALNGL 116
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG-NLLLIIW 178
+ RS +I+ LL +V LV+ V +Y+ +
Sbjct: 117 WHEPRKRSIFIS-------FLLYAVILVLAPLVAGVSIAITSYIMSLSLFNEVATFSLTT 169
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
Y L +++ ++ F+P K G +F I + +G F YI TF +Y
Sbjct: 170 TLLNYTPFLLIWLLFTLIYKFVPNTPVKFKHACMGALFAGIFFTLGKQAFIWYITTFPSY 229
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA + L+++++ +LG + A + K+
Sbjct: 230 QAIYGALAVLPIMLLWIHLSWQVVLLGGQFAAVLKELEMIKQ 271
>gi|21674148|ref|NP_662213.1| ribonuclease BN, putative [Chlorobium tepidum TLS]
gi|32699641|sp|Q8KCT5|Y1325_CHLTE RecName: Full=UPF0761 membrane protein CT1325
gi|21647308|gb|AAM72555.1| ribonuclease BN, putative [Chlorobium tepidum TLS]
Length = 422
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 97/255 (38%), Gaps = 9/255 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
HFV + A ++ LLS+ P + ++ + I D +F +
Sbjct: 26 MWRHFVHDRVLMSAGSLAFQTLLSLVPLMAVTLSILKVFPVFASLKQYIGDFLFQNFAPA 85
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + + + L T+ L + + +LN + V R RL
Sbjct: 86 QGSILKGYLWEFIDKTSS-LSTVGGLFLIVIVLFLISTIDQTLNDIWEVQTPR----RRL 140
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
G+ L +V L + LA +YV A G LL + Y +L I
Sbjct: 141 Q--GFTLYWTV-LTLGPVFIGTSVLASSYVWYSVFAEGALLEMKARVLSYVPVLNSVIAF 197
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P K + L G + + + + FT Y+ +F+T+ +Y L+ +
Sbjct: 198 FLLYMLVPNRKVRFTHALAGGVLAAVLFELAKRWFTFYVSSFATFEHIYGALSVVPMLFF 257
Query: 254 FLYMLGVFFILGAEL 268
++Y+ V + GAE
Sbjct: 258 WIYLEWVVVLTGAEF 272
>gi|261250579|ref|ZP_05943154.1| ribonuclease BN [Vibrio orientalis CIP 102891]
gi|260939148|gb|EEX95135.1| ribonuclease BN [Vibrio orientalis CIP 102891]
Length = 305
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 95/262 (36%), Gaps = 10/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWP 71
+ + A +++ LLS+ P + ++ + D V +
Sbjct: 15 RYLLSRMGHDRVNVNAGYLAYITLLSIVPMLTVLLSVLSSFAIFENAGDAIQDFVITHFV 74
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ +L+ ++ + + + + + +LN +RV + R
Sbjct: 75 PAAGDAVKGALLEFVSN-TGKMSAVGGGFLFVAALMLISNIDKNLNYIWRVQQKR----- 128
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-F 190
+ + + L + + A A +YV + ++N + L
Sbjct: 129 --RAVFSFSMYWMVLTLGPILVGASIAATSYVTSLKIIESEAVSGVYNLLLRWLPFLLSL 186
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++L +P K +I L G I + + F YI F +Y +Y LA+I
Sbjct: 187 FAFVGLYLLVPNKKVRISHALIGAIVAALLFEASKKGFAAYITQFPSYQLIYGALAAIPI 246
Query: 251 CLVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 247 LFVWVYLCWLIVLVGAEVTAAL 268
>gi|327485209|gb|AEA79616.1| Ribonuclease BN [Vibrio cholerae LMA3894-4]
Length = 297
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 102/274 (37%), Gaps = 10/274 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
VI D V + + + +++ +A + + + + + +LN
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYI 126
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + L + + A A +Y+ L ++N
Sbjct: 127 WRVQQKR-------RAVFSFSMYWMILTLGPILVGASIAATSYITSLKILDNEALSGVYN 179
Query: 180 -GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 180 LFLRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 240 QLIYGALAAIPILFVWVYLCWLIVLVGAEVTAAL 273
>gi|238024278|ref|YP_002908510.1| YihY family protein [Burkholderia glumae BGR1]
gi|237878943|gb|ACR31275.1| YihY family protein [Burkholderia glumae BGR1]
Length = 301
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 100/266 (37%), Gaps = 13/266 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA F E+ MA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFRRFSEDHCTTMAAAIAFYSAFSLAPMLVMVIAVAGWFFGADAARGEVFSQVHSLIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + G +S L +S +L +L + E R
Sbjct: 82 EAAAGVQTIVENAHRKGNAGGFAAAVSVLLLVVGASATFSSLNTALGVVWPAAEKRWSSM 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ +V ++ ++I + A
Sbjct: 142 FGLVRVRLISFGLVLGVAFLLIVSLML----DTAITFVGRWLWGNTPFVVIGNLLQFTAG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A L G I + + + G LF Y+ T ++ +
Sbjct: 198 IAILAAAFAALLKFLPDAHVTRRDALTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
S+ L++LY +LGAE A+
Sbjct: 257 GSLAVLLMWLYFSAAVLLLGAEFAAA 282
>gi|229495956|ref|ZP_04389680.1| ribonuclease BN [Porphyromonas endodontalis ATCC 35406]
gi|229317048|gb|EEN82957.1| ribonuclease BN [Porphyromonas endodontalis ATCC 35406]
Length = 436
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 107/270 (39%), Gaps = 9/270 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +Y AI+ FV+ D + AS ++ S +L++ P + +A G
Sbjct: 13 RRIYINSLKSLYMAIKGFVQGDLTSKASALTYSTVLAIVPMLAVLVGIAKGFGVQ---DA 69
Query: 62 VIDVVFGAWPEVIAKPITD--EILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
+ D + P A+ + L+ GL I + Y N + + + NR
Sbjct: 70 ISDFLIETLPTHTAEISKSLGFVENYLSQVKGGLFLGIGLVFLLYTVFNLLSTIENAFNR 129
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + R++ F + L V +V+ S + +A+ K F LG++ +
Sbjct: 130 IWETTKGRTFKDKVTSYFTMIFLLPVLIVLSSGITIAMTTIKNTFMKDFFLLGSMTTFLI 189
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
N + + + + LP K + + L +++ +L+ ++ S Y
Sbjct: 190 N---LVPFVLTVFSFVAIFMALPNVKVRFVPALISGTLAGVAFQGFQMLYIGGMLWISRY 246
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +Y G A+ L+++ + + + A+L
Sbjct: 247 NAIYGGFAAFPLLLLWMQLTWIITLFCAKL 276
>gi|332701658|ref|ZP_08421746.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
gi|332551807|gb|EGJ48851.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
Length = 453
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 98/250 (39%), Gaps = 4/250 (1%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
FV + A+ ++ + +LS+ P + +++ LG H I +
Sbjct: 48 FVRDKCHLRATALAYATILSLAPLMAVALSISKALGLHD--SAFIRAALLRITAGREELA 105
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ V + L + L + V + + N + V RS + + F
Sbjct: 106 RTILHFVETSSVRTLGYLGTLVLIAMAVAMVITVENAFNAIWGVARGRSLWR-KFTDFFS 164
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
VL+ S LV ++ F + A V++ L + A + +++ +F++
Sbjct: 165 VLVLSPLLVFLAVSFTVSLQSEALVQRMLEFTALNYLHL-LALKLAPYVMVWLAFLFLYS 223
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
F+P K ++ S G + W + ++ + V+ + Y +Y A L+++Y+
Sbjct: 224 FMPHTKVRLRSAAVGAVLAGTLWQLAQWVYIRHQVSLTDYGAIYGSFAQFPLFLIWMYIS 283
Query: 259 GVFFILGAEL 268
V +LG E+
Sbjct: 284 WVIVLLGGEI 293
>gi|19552177|ref|NP_600179.1| hypothetical protein NCgl0913 [Corynebacterium glutamicum ATCC
13032]
gi|62389842|ref|YP_225244.1| hypothetical protein cg1086 [Corynebacterium glutamicum ATCC 13032]
gi|41325177|emb|CAF19658.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032]
Length = 368
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 106/281 (37%), Gaps = 24/281 (8%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVFG 68
+ + + +A+ ++ ++LS+ P ++ G ++ + + + V D V
Sbjct: 44 LNRTVRDVFPDGLLDLAALLTFFSILSIAPAVLLGYSVITIFLASDSTEILNLVRDEVNQ 103
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE + + I + A G + + A + SS V A N Y E R
Sbjct: 104 YVPEDQSHVVNGVIDSIAGSAAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRSEGR 163
Query: 127 SWYITRLISFGYVLLASV-------------TLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ + L + TLV+ F +A PL ++ L +
Sbjct: 164 TLIKRWAMLLFLNLALLLGIIIILVSWVLNETLVMGIFAPIAEPL---HLTNVLSFLTDR 220
Query: 174 LLIIWNG-RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHY 231
+ IW R + L + + ++ + P A+ K + G + ++ V Y
Sbjct: 221 FMPIWIWVRFPVIVGVLIMFVATLYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFY 280
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
F+ +S+ Y + S++ + L++ + I+G +++ +
Sbjct: 281 FTLFAAFSS-YGAVGSLLAVFIALWVFNICLIIGLKIDVEI 320
>gi|315606247|ref|ZP_07881264.1| YihY family protein [Prevotella buccae ATCC 33574]
gi|315252069|gb|EFU32041.1| YihY family protein [Prevotella buccae ATCC 33574]
Length = 467
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 8/263 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ +Y ++ F+ A +S S LL++ P + +A G ++ +
Sbjct: 53 LLRKVYLSLRFFIGRGHTDYAPSLSFSTLLAIVPVVAAVFAIAKGFGLAGYIEQWLHKAL 112
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ P+V+ I + + I L Y + + + + + ++V E RS
Sbjct: 113 TSQPQVVDWIIQLSNSYLDHAKTGVVIGIGILVMLYSVMSLIYNIESAFDDIWQVKEKRS 172
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W L + LA V L+++S + + + ++ + LL I I + L
Sbjct: 173 WNRVLLDYTSMLFLAPVVLILISGANIFVYGVVDSLQGYL-----LLGRITRLLIKVSPL 227
Query: 188 ALFIGLI-FVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L +++F+P + + S + PG I ++ + + + H + S+YS +Y
Sbjct: 228 VLTSAFFTLLYVFMPNTRVRFRSAVGPG-ILAGVAMTLLQLFYVHSQLFLSSYSAIYGSF 286
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
A++ +++L + + AEL
Sbjct: 287 AALPLFMLWLLISWYICLFCAEL 309
>gi|169632391|ref|YP_001706127.1| putative ribonuclease (Rbn) [Acinetobacter baumannii SDF]
gi|169794639|ref|YP_001712432.1| putative ribonuclease (Rbn) [Acinetobacter baumannii AYE]
gi|184159553|ref|YP_001847892.1| hypothetical protein ACICU_03233 [Acinetobacter baumannii ACICU]
gi|213158790|ref|YP_002320788.1| putative ribonuclease [Acinetobacter baumannii AB0057]
gi|215482228|ref|YP_002324410.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB307-0294]
gi|239504229|ref|ZP_04663539.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB900]
gi|301345381|ref|ZP_07226122.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB056]
gi|301511247|ref|ZP_07236484.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB058]
gi|301595629|ref|ZP_07240637.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB059]
gi|332855628|ref|ZP_08435971.1| YihY family protein [Acinetobacter baumannii 6013150]
gi|332868559|ref|ZP_08438225.1| YihY family protein [Acinetobacter baumannii 6013113]
gi|332873002|ref|ZP_08440961.1| YihY family protein [Acinetobacter baumannii 6014059]
gi|169147566|emb|CAM85427.1| putative ribonuclease (Rbn) [Acinetobacter baumannii AYE]
gi|169151183|emb|CAO99858.1| putative ribonuclease (Rbn) [Acinetobacter baumannii]
gi|183211147|gb|ACC58545.1| predicted membrane protein [Acinetobacter baumannii ACICU]
gi|193078443|gb|ABO13434.2| putative ribonuclease (Rbn) [Acinetobacter baumannii ATCC 17978]
gi|213057950|gb|ACJ42852.1| putative ribonuclease [Acinetobacter baumannii AB0057]
gi|213987057|gb|ACJ57356.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB307-0294]
gi|322509463|gb|ADX04917.1| Rbn [Acinetobacter baumannii 1656-2]
gi|323519484|gb|ADX93865.1| hypothetical protein ABTW07_3448 [Acinetobacter baumannii
TCDC-AB0715]
gi|332727343|gb|EGJ58779.1| YihY family protein [Acinetobacter baumannii 6013150]
gi|332733329|gb|EGJ64522.1| YihY family protein [Acinetobacter baumannii 6013113]
gi|332738784|gb|EGJ69652.1| YihY family protein [Acinetobacter baumannii 6014059]
Length = 415
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 103/282 (36%), Gaps = 8/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F I I+ F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFILFVIKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D+ L + L I L + + ++ NR
Sbjct: 69 QQLQHLIYSNFLPKSTIAF--DKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E RS + + + ++ ++ +FV + ++ + F +
Sbjct: 127 IWRVKETRSGIVG-FMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLDGAFL- 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +G ++ +P + + + + LF+ + F++Y
Sbjct: 185 --LWLISFVLTILGFFILYWTIPNRTVPLYAAAIAACLSAALFETLKNLFSFVMSNFTSY 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 243 EIIYGAFAAVPIFLLWVFLSWNIVLLGVEVSFALTAFHSGKE 284
>gi|281180947|dbj|BAI57277.1| tRNA processing exoribonuclease BN [Escherichia coli SE15]
Length = 290
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 10/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 129 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y LA I V++Y +LGAE+ ++ Y K
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|21233247|ref|NP_639164.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66770189|ref|YP_244951.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. 8004]
gi|21115081|gb|AAM43055.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66575521|gb|AAY50931.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. 8004]
Length = 330
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 99/274 (36%), Gaps = 19/274 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F+E D A+ +S ALLS+ P +V L L ++ +
Sbjct: 39 LFNRFLEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQIAQLAGGSA 97
Query: 75 AKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMR-----S 127
A+ I P G S L ++ L+ +LN +R + R +
Sbjct: 98 AEVADTVIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGIMA 157
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ SFG +L L++ A+ + A + PA+G T+
Sbjct: 158 WLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG----------YVTTLA 207
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ F++ +LP G + T + + +G YI + S Y + +
Sbjct: 208 LYSLAFAFLYRYLPDRTVNWRQAFVGGVITSLLFALGRYAIGVYIAKAAPGSA-YGSMGT 266
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ LV++Y V F +GA L A + +
Sbjct: 267 LVILLVWMYYASVVFFIGALLTAVIDERVRSHRK 300
>gi|315635133|ref|ZP_07890411.1| tRNA-processing ribonuclease BN [Aggregatibacter segnis ATCC 33393]
gi|315476095|gb|EFU66849.1| tRNA-processing ribonuclease BN [Aggregatibacter segnis ATCC 33393]
Length = 278
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 105/266 (39%), Gaps = 10/266 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
+ F + A +++ S +L++ P I+ ++ V + + +F +
Sbjct: 11 FWQRFNQNKLTQAAGYLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFTNFAPS 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I + + +K + + ++ + + ++ +LN + R + +
Sbjct: 71 ASDMVGQYIDEFVNN-SKKMSAVGIISLIVVALMLINSIDRTLNSIWHDTGTRPIFTSFA 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + L + + A A YV+ F + N + + L+ +
Sbjct: 130 I-------YWLILTLGPLLVGASIAASTYVKTMFESASNFSFSL-KLLSFVPFLSTWFIF 181
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P K I G + + + +G F YIVTF +Y +Y +A++ L+
Sbjct: 182 TLIYMVVPNQKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQLIYGAMATLPIMLL 241
Query: 254 FLYMLGVFFILGAELNASMIIYYWRK 279
++ + +LGA+L A + +K
Sbjct: 242 WIQLSWTVVLLGAQLAAVLAELRSKK 267
>gi|189499966|ref|YP_001959436.1| ribonuclease BN [Chlorobium phaeobacteroides BS1]
gi|288559216|sp|B3EQ23|Y1013_CHLPB RecName: Full=UPF0761 membrane protein Cphamn1_1013
gi|189495407|gb|ACE03955.1| ribonuclease BN [Chlorobium phaeobacteroides BS1]
Length = 427
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 103/269 (38%), Gaps = 9/269 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + + ++F+++ A ++ LLS+ P + ++ +
Sbjct: 16 LSALLSYLRSFLPFMWKNFMQDRVLLSAGSLAFQTLLSLIPLMAVVLSVLSVSPVFETFK 75
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+D +F + I + + + A + T+ + + + + ++N+
Sbjct: 76 RYVDDFLFQNFVPASGSMIREYFWEFIGNTAT-VPTVGGIFLLIIALFLISTIDHTINQI 134
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V R G+ L +V L + + + +A +YV G L +
Sbjct: 135 WDVRAPRKILQ------GFTLYWTV-LTLGPIIIGSGLVASSYVWYTVFTEGPFLELRTR 187
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
Y ++ F+ +++ +P + + + + G + + F+ Y+ TF+T+
Sbjct: 188 ILSYLPLVNSFLAFFLLYMLVPNHRVRFLHAVSGAFLATWLFELSKQWFSFYVKTFATFE 247
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L+ I ++Y++ V + GAE
Sbjct: 248 HIYGALSVIPLLFFWIYLIWVVALSGAEF 276
>gi|260599962|ref|YP_003212533.1| hypothetical protein CTU_41700 [Cronobacter turicensis z3032]
gi|260219139|emb|CBA34494.1| tRNA-processing ribonuclease BN [Cronobacter turicensis z3032]
Length = 289
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 102/264 (38%), Gaps = 10/264 (3%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAK 76
E++ +A +++ +LLS+ PF+ L V + VF +
Sbjct: 26 RIDEDNMTTLAGNLAYVSLLSLVPFVAVIFALFAAFPMFSDVSLQLRHFVFANFMPATGD 85
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I Q +A +K + + AL S + A+ +LN +R R + + +
Sbjct: 86 IIQRYIEQFVANSSK-MTAVGALGLIVTSLLLMYAIDSALNTIWRSTRKRPKVYSFAV-Y 143
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+L L S V + L+L + F + +L +L ++ +
Sbjct: 144 WMILTLGPLLAGASLVISSYLLSLRWASGFTTMIDEVL-------RIFPLLLSWLSFWLL 196
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ +P + L G + + + +G F YI F +Y +Y LA I +++Y
Sbjct: 197 YSVVPTTRVPARDALIGSLVAALLFELGKKGFALYITMFPSYQLIYGVLAVIPILFLWVY 256
Query: 257 MLGVFFILGAELNASMIIYYWRKK 280
+LGAE+ ++ Y ++
Sbjct: 257 WTWCIVLLGAEITVTLGDYRQLRQ 280
>gi|109900253|ref|YP_663508.1| ribonuclease BN [Pseudoalteromonas atlantica T6c]
gi|123170559|sp|Q15NT4|Y3954_PSEA6 RecName: Full=UPF0761 membrane protein Patl_3954
gi|109702534|gb|ABG42454.1| tRNA-processing RNAse BN [Pseudoalteromonas atlantica T6c]
Length = 300
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 104/272 (38%), Gaps = 8/272 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGA 69
+ + H + A H++ +LLS+ PFI+ + A V + ++FG
Sbjct: 21 FVRMFVNHCQRDGITVSAGHLAYVSLLSLVPFIMVFFTILSAFPAFSEVRGDIEALIFGN 80
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ I + + + +K + I L+ + + + +LNR ++ R
Sbjct: 81 FIPTSGDQIQGYVAEFVGNASK-MGAIGILSLVVVALLLISNIDKTLNRIWQAKSERPII 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
T I Y ++ ++ +++ + +A+ A + +A
Sbjct: 140 FTFAI---YWMILTLGPLLIGLSVIMSSYLVAFANS---AEAYTMGATTAMLKIVPFIAS 193
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+++ +P + L G + + + F+ YI F +Y +Y +A I
Sbjct: 194 VCAFFILYMIVPNKRINPRHALVGAFMGALLFELSKKGFSFYITHFPSYQMIYGAMAVIP 253
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
V++Y+ + +LGAEL + +++ +
Sbjct: 254 ILFVWVYLSWIVVLLGAELTHVIEVFFHEESK 285
>gi|307702045|ref|ZP_07639052.1| ribonuclease BN, putative [Streptococcus mitis NCTC 12261]
gi|307616532|gb|EFN95722.1| ribonuclease BN, putative [Streptococcus mitis NCTC 12261]
Length = 183
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + VV
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFRIP--VSNFLKVVNEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + I +VL P+ GL + + L+A + S + L+ + N+AY V + R
Sbjct: 71 PDTMYDVVAKIITEVLTQPSTGLLSFAVLSALWTFSKSMNFLQKAFNKAYGVAKNRGMIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+L+S + + F+ V + L ++ ++ + + + +
Sbjct: 131 HQLMSLFVSFGLQILFALALFLSVFGRMLLNLIKSYWKSDSPIFDYLQDL 180
>gi|118618670|ref|YP_907002.1| hypothetical protein MUL_3347 [Mycobacterium ulcerans Agy99]
gi|118570780|gb|ABL05531.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length = 324
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 106/277 (38%), Gaps = 15/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ I + ++ ++ ++ + LS+ P ++ ++ F +
Sbjct: 11 HHIWRISLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVA-PLFGQDTLPA 69
Query: 66 VFGAW---------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ P V+ + I I + A + ++ L + + S+ + + ++
Sbjct: 70 IEKTIISMTHRFFSPSVVDEIIEPTIRDITANARGEVVSVGFLISLWAGSSAISSYVDAI 129
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
A+ +R R + ++ + +VI + V V P V + P ++ +
Sbjct: 130 VEAHDQTPLRHPVRQRFFALFLYVVGLLFIVISAPVAVMGP---RKVSEHIP--DSMSNL 184
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ G A + L +G+I ++ ++ G + +++ + Y+ +
Sbjct: 185 MHYGYYPALIAVLTVGVIILYRVSLPVPLPTHRLILGAVLAMAVFLIATLGLRFYLGWIT 244
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y L++ + L+F + G ++GAELNA++
Sbjct: 245 HTGYTYGALSTPIAFLLFAFFGGFAVMIGAELNAAIQ 281
>gi|89890230|ref|ZP_01201740.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
gi|89517145|gb|EAS19802.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
Length = 333
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 116/265 (43%), Gaps = 10/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGA 69
+++++ + + ++D W +++ ++ +L++ +V N+ G + + + +
Sbjct: 19 LLWESAKKWNDDDVWQLSASVAYYTILALPGLLVIMINIVGAVWDTEIATGRLTSSLTSL 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEMR-- 126
A+ I + I ++ F++ GV L++SLN+ +++
Sbjct: 79 IGYDSAESINGILQAASKDTESWFAKIIGVSTLVFAATGVFYQLQLSLNKIWKLKINPKT 138
Query: 127 SWYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
W+ R+ SFG++L+ ++I + I + +++ A L ++ N +
Sbjct: 139 PWWKIITDRVKSFGFILVLGFLILISFILSAIIGILQDWIQVHIAAYLGKLALLVNYIVS 198
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++++ GL+F +LP A+ K + PG + T I + G L Y S+ ++ Y
Sbjct: 199 LSIISFLFGLMF--RYLPDARLKWKMVWPGALLTGILFETGKFLLEIYFTQ-SSPASAYG 255
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
I+ L+++ + GAE
Sbjct: 256 AAGLIVLLLLWVSYSSLILFYGAEF 280
>gi|288957833|ref|YP_003448174.1| ribonuclease [Azospirillum sp. B510]
gi|288910141|dbj|BAI71630.1| ribonuclease [Azospirillum sp. B510]
Length = 481
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 103/276 (37%), Gaps = 7/276 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + ++ F ++ + A+ ++ ++LL++ P + G + A + I
Sbjct: 47 FRELGGFFGHSMLRFYNDNCFQTAASLTYTSLLAIVPIMTIGFAVFSAFPAFSALQMRIQ 106
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V I I + + + +A A + + A + + + S +RV
Sbjct: 107 TAVIKNLVPEIGDAILEYLGRFMAN-AGQMPIFGVIGLAVSAVLLIWTIEGSFATVWRVR 165
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RS+ TR++SF V+ + S + + L ++ + +
Sbjct: 166 EPRSYV-TRILSFWAVVSLTPLFAGASLSLSST----LWTALELAHLEGVVHPLAGIGML 220
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+G ++L +P + + L G I +F Y+ + Y T+Y
Sbjct: 221 LPFGLQLLGCSLLYLVIPNREVFWLDALCGGAIGSILLEGSKAIFGWYMREYPAYQTIYG 280
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+ + L +LY+ + GA + AS+ + K
Sbjct: 281 ALSVVPIFLFWLYIAWSTVLFGAVVTASLPEWRAGK 316
>gi|260557072|ref|ZP_05829289.1| tRNA-processing ribonuclease BN(RNase) [Acinetobacter baumannii
ATCC 19606]
gi|260409678|gb|EEX02979.1| tRNA-processing ribonuclease BN(RNase) [Acinetobacter baumannii
ATCC 19606]
Length = 396
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 103/282 (36%), Gaps = 8/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F I I+ F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFILFVIKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D+ L + L I L + + ++ NR
Sbjct: 69 QQLQHLIYSNFLPKSTIAF--DKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E RS + + + ++ ++ +FV + ++ + F +
Sbjct: 127 IWRVKETRSGIVG-FMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLDGAFL- 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +G ++ +P + + + + LF+ + F++Y
Sbjct: 185 --LWLISFVLTILGFFILYWTIPNRTVPLYAAAIAACLSAALFETLKNLFSFVMSNFTSY 242
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 243 EIIYGAFAAVPIFLLWVFLSWNIVLLGVEVSFALTAFHSGKE 284
>gi|187477087|ref|YP_785111.1| BrkB [Bordetella avium 197N]
gi|115421673|emb|CAJ48183.1| BrkB [Bordetella avium 197N]
Length = 299
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/277 (16%), Positives = 103/277 (37%), Gaps = 10/277 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFG 68
++ D+ + + + + ++L + S+ P ++ +AG F G + +
Sbjct: 17 QLLMDSAKQWSRHRASSKGAALALYMVFSLAPMLILVIAVAGAFFGEDTVRSELFAQMSD 76
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAA-AYFSSNGVEALRISLNRAYRVVEMR- 126
E A+ I + L + +L + ++ L+ SL+ + +
Sbjct: 77 LMGERGAEVIHTVLASAHESSKSWLAALLSLGMMVFSATTAFSELKDSLDELWETKPNQA 136
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+R++SFG VL+ + ++ V A+ +A AY + + +W
Sbjct: 137 SGGIQGLVRSRILSFGLVLVLACFMLFSLAVNAAMGVARAYYGELWSYSLVATAGVWVAN 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + + + LP+ +LPG + T +++G Y+ ++
Sbjct: 197 LF-SFSVVTALFAVIFKLLPSISLPWRQVLPGAVVTAALFLLGKWGIGLYLSH-GGVASA 254
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y S++ L+++Y F GA L R
Sbjct: 255 YGAAGSLIAFLLWIYYSSQIFFFGAVLTRQYASQAQR 291
>gi|190572510|ref|YP_001970355.1| putative ribonuclease [Stenotrophomonas maltophilia K279a]
gi|190010432|emb|CAQ44040.1| putative ribonuclease [Stenotrophomonas maltophilia K279a]
Length = 306
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 63/288 (21%), Positives = 108/288 (37%), Gaps = 20/288 (6%)
Query: 1 MREYFCIVFDII-YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+R+Y + D + FV+ D A+ +S ALLS+ P +V L L
Sbjct: 12 LRKYIKRLQDSFPMAVAKRFVDVDVLTQAASVSFYALLSMAPLLVLLLWLTASL-YPPAQ 70
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLN 117
+ID + A + P G S L ++ L+ +LN
Sbjct: 71 QALIDQISSVAGSSAATVAETVLKNADNQPDVGSLAGVWSTLLLFVGATAVFAQLQNALN 130
Query: 118 RAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+R R +W R+ SFG VL L++ + +A A + PALG
Sbjct: 131 LIFRTSGERLEGLKAWLRKRVFSFGVVLALGFLLILSMTATTVLQVAFAQLPSILPALG- 189
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
++L +G F++ +LP + G + T + +G YI
Sbjct: 190 ---------YVTSLLLYAVGFAFMYHYLPDRRVAWRQAFIGGVITSALFALGRYGIGVYI 240
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
T + S Y + +++ LV++Y V F +GA + A + +
Sbjct: 241 ATVAPGSA-YGSMGALVISLVWIYYATVVFFVGALMTAVIDERLRARH 287
>gi|325920512|ref|ZP_08182437.1| putative membrane protein [Xanthomonas gardneri ATCC 19865]
gi|325548995|gb|EGD19924.1| putative membrane protein [Xanthomonas gardneri ATCC 19865]
Length = 315
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/289 (19%), Positives = 106/289 (36%), Gaps = 20/289 (6%)
Query: 1 MREYFCIVFDII-YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
++++ + + + F+E D A+ +S ALLS+ P +V L L
Sbjct: 9 LQKHLGRLQRSLPMALLNRFLEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQ 67
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLN 117
++ + A+ I P G S L ++ L+ +LN
Sbjct: 68 EALVQQIAQLAGGSAAEVADTVIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALN 127
Query: 118 RAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+R + R +W R+ SFG +L L++ A+ + A + PA+G
Sbjct: 128 LIFRTDKERLEGVVAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAIG- 186
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
T+ + F++ +LP G + T + + +G YI
Sbjct: 187 ---------YVTTLALYSLAFAFLYRYLPDRTVNWRQAFVGGVITALLFALGRYGIGLYI 237
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ S Y + +++ LV++Y V F +GA L A + +
Sbjct: 238 AKAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALLTAVIDERVRSHRK 285
>gi|323528569|ref|YP_004230721.1| ribonuclease BN [Burkholderia sp. CCGE1001]
gi|323385571|gb|ADX57661.1| ribonuclease BN [Burkholderia sp. CCGE1001]
Length = 312
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/287 (17%), Positives = 103/287 (35%), Gaps = 14/287 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
++ +A + F+ + MA+ + + S+ P ++ +AG F G +
Sbjct: 16 RLRNALRVVVNAGKRFMSDRCPMMAASVGFYSAFSLAPTLLMVLAVAGWFFGEDAARGRL 75
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYR 121
D V G + A+ + + G+ + S + +S +L +L+
Sbjct: 76 FDQVRGILGKDAAEAMQTIVEHAHRASGGGIAAVVSLVLLIVGASATFTSLNTALDVVLE 135
Query: 122 VVEMR-------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ TRL+S G VL LV+ + A+ Y L+
Sbjct: 136 AEKNVKSKSSLTWLVRTRLVSVGMVLGLGFLLVVSLVL----DTAITYAGHALFGDSPLV 191
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ + ++ L + ++ A+ + G + I + VG LF Y+
Sbjct: 192 IVTAVLQTVLGLIVLGAAFTALLRWMSDARVSLAHAAVGGMTAAILFSVGRHLFGLYLTH 251
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
T ++ + S+ +++LY F+ GAE A + K
Sbjct: 252 AGT-ASSFGAAGSLAVLMMWLYFSAAVFLFGAETTAELAGRNEVKDK 297
>gi|33415360|gb|AAQ18212.1| probable ribonuclease [uncultured bacterium]
Length = 427
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/256 (18%), Positives = 94/256 (36%), Gaps = 9/256 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
+ F E+ A ++ + +++ P L ++ + G P+ I
Sbjct: 50 QRFREDRLGVTAGSLTFTTTIALVPLFTVMLALFSAFPVFARFRKTLEAQFIQGFVPDAI 109
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
AKP+ + + A+ A L + +A A + + + +LN +RV R L+
Sbjct: 110 AKPVLLSLTK-FALKASQLGGMGLIALAVTALALMLTIDRTLNAIWRVRTPRPVAQKVLV 168
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L V + A + P L + G
Sbjct: 169 YWSALTLGPLVLGASLSVTSYLLSASRGLVDELPGGIEFFLSL------VVFGLQTGGFA 222
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ F+P + G +F + +G + Y+ YST+Y A++ LV+
Sbjct: 223 LLFRFVPNTHVRWEHAWGGALFVSGALELGQKVLALYLGKVPIYSTIYGAFAAVPIFLVW 282
Query: 255 LYMLGVFFILGAELNA 270
+Y+ V ++GA + A
Sbjct: 283 IYLSWVIVLMGAVIAA 298
>gi|148985239|ref|ZP_01818462.1| ribonuclease BN, putative [Streptococcus pneumoniae SP3-BS71]
gi|147922437|gb|EDK73556.1| ribonuclease BN, putative [Streptococcus pneumoniae SP3-BS71]
Length = 204
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 69/170 (40%), Gaps = 4/170 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
AY V + R +++S + F+ + + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLILFGQMIFGFTCSLLD 168
>gi|194334278|ref|YP_002016138.1| ribonuclease BN [Prosthecochloris aestuarii DSM 271]
gi|288559221|sp|B4S8V4|Y1471_PROA2 RecName: Full=UPF0761 membrane protein Paes_1471
gi|194312096|gb|ACF46491.1| ribonuclease BN [Prosthecochloris aestuarii DSM 271]
Length = 422
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 102/267 (38%), Gaps = 9/267 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPT 61
+ V + + F + A ++ LLS+ P + ++ F
Sbjct: 14 DALRSVRSFLAFFSKSFNRDQVLLSAGSLAFQTLLSIVPLMAVILSVLSVSPVFDSFKQY 73
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V + +F + + + + Q ++ + + TI L+ + + + +LNR +
Sbjct: 74 VEEFIFQNFLPASGVEVQEYLWQFISKTSS-VPTIGGLSLFIIALFLISTIDHTLNRIWG 132
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R ++ G+ L +V L + + +A +YV F G L +
Sbjct: 133 VDAPRKFFQ------GFTLYWTV-LTLGPIFIGSSLVATSYVWYNFFTQGALADVQAKTL 185
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ F+ +++ +P K K + G I + + F Y+ +T+ +
Sbjct: 186 LLLPVMNTFLAFFLLYILVPNRKVKFVHAFSGAILATLLFEFSKRWFAFYVSHVATFEHI 245
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y L+ I ++Y++ V + GAE
Sbjct: 246 YGALSVIPLLFFWIYLIWVVALSGAEF 272
>gi|119510788|ref|ZP_01629914.1| Ribonuclease BN [Nodularia spumigena CCY9414]
gi|119464551|gb|EAW45462.1| Ribonuclease BN [Nodularia spumigena CCY9414]
Length = 340
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 99/272 (36%), Gaps = 11/272 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TV 62
V+ + + ++ + E+ +A+ ++ + S+ P ++ +AG + +
Sbjct: 2 KLQAVWTLFPETLKQWSEDKASRLAAALAYYTIFSIAPLLIIVIAIAGAAFGEEAARGEI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
+ + A+ + I A + +I ++ + GV A L+ SLN +
Sbjct: 62 VRQIEDLVGRDGAQFLEIAIKNASRPQAGAIASILSVVILLIGATGVFAELQDSLNTIWD 121
Query: 122 VVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V R +SF +L L++ + + + Y P + ++ +
Sbjct: 122 VKARPGRGIMTIIRQRFLSFTMILGIGFLLLVSLVISAGLSALITYFSNALPEIDSIWQM 181
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + LP + +L G + T + + +G L YI S
Sbjct: 182 LN---FILSFAITTVIFALIFKVLPDVRITWSDVLIGALLTSLLFSIGKFLLGQYIGR-S 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T + Y S++ + ++Y GAE
Sbjct: 238 TLGSAYGAAGSLVVIIAWVYYAAQILFFGAEF 269
>gi|256390949|ref|YP_003112513.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256357175|gb|ACU70672.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 355
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 90/232 (38%), Gaps = 17/232 (7%)
Query: 38 SVFPFIVFGANLAGFLGAHQFVPTVIDV-------VFGAWPEVIAKPITDEILQVLAVPA 90
S+ P + A G+L ++++ + I + +LA
Sbjct: 78 SLPPLAIGLAGTLGYLNGWIGAARIVEIKHHIEGAAGTMLSGPGVQKIDGLLTNLLANGH 137
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
L +I L A + S + ++ AY + R TRL++FG +L + +
Sbjct: 138 PELISIGFLLALWAGSRAMNVYVDTITIAYGLSGRRGIVRTRLLAFGMYMLGLLLGSVAL 197
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
+ V P L AL + +I + L L ++ ++
Sbjct: 198 PLLVIGPDLL------VSALPPITDLIHAVYWPLMLTVLAAFLNTLYHLAVPVRTPWSQD 251
Query: 211 LPGVIFTWISWVVGAVLFTHYIV-TFS---TYSTMYAGLASIMTCLVFLYML 258
LPG + + W+ G+ L Y+ TFS + +++Y GLA+ + LV+LY+
Sbjct: 252 LPGTVLALLLWLGGSALLRDYVSTTFSDTKSTNSLYGGLAAAVAILVWLYVT 303
>gi|308047823|ref|YP_003911389.1| tRNA-processing RNAse BN [Ferrimonas balearica DSM 9799]
gi|307630013|gb|ADN74315.1| tRNA-processing RNAse BN [Ferrimonas balearica DSM 9799]
Length = 289
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/277 (16%), Positives = 105/277 (37%), Gaps = 8/277 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + V E A H++ +LLS+ P + ++ V
Sbjct: 12 MQLSWREVLGFFPYLWRRVGENGLQVTAGHLAYVSLLSLVPMLAVVLSVFSAFPGFAGVR 71
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ V+ + + + + Q + ++ + + L A + + + +LNR
Sbjct: 72 ADLEAFVYNNFVPTAGETVQLYLSQFVDNASR-MTAVGVLFLAVVALMLISNIDKALNRI 130
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV R + S +++L +++ + + V L + G +I
Sbjct: 131 WRVKTRRRAIYS--FSMYWMILTLGPMLMGASIAVTSYLVSMKLFSDTGLSGAYAFLIAR 188
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
L ++L +P + + + G + + G F Y+ F +Y
Sbjct: 189 ----LPFLLSVSAFALLYLLVPNTRVRFHHAVIGAFVAALLFEAGKRGFAWYVTQFPSYE 244
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y LA+I +++Y+ + +LGAE+ A++ ++
Sbjct: 245 AIYGALATIPILFLWVYLSWLIVLLGAEITAALPEHF 281
>gi|323497005|ref|ZP_08102028.1| hypothetical protein VISI1226_16398 [Vibrio sinaloensis DSM 21326]
gi|323317849|gb|EGA70837.1| hypothetical protein VISI1226_16398 [Vibrio sinaloensis DSM 21326]
Length = 306
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 96/272 (35%), Gaps = 10/272 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
F + + A +++ LLS+ P + ++
Sbjct: 5 RIFKQSLIFGRYLLTRMGHDRVNVNAGYLAYITLLSIVPMLTVLLSVLSSFSIFADAGDA 64
Query: 63 I-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I D V + + +L+ ++ + + + + + +LN +R
Sbjct: 65 IQDFVITHFVPAAGDAVKGALLEFVSN-TGKMSAVGGAFLFVAALMLISNIDKNLNYIWR 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R + + + L + + A A +YV + + ++N
Sbjct: 124 VKNKR-------RAVFSFSMYWMVLTLGPILVGASIAATSYVTSLRILESDAISGVYNLL 176
Query: 182 IYATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L F + ++L +P K + + G I I + F YI F +Y
Sbjct: 177 LRWLPFLLSFFAFVGLYLLVPNKKVYLSHAVVGAIVAAILFEASKKGFAAYITQFPSYQL 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 237 IYGALAAIPILFVWVYLCWLIVLVGAEVTAAL 268
>gi|326384456|ref|ZP_08206136.1| ribonuclease BN [Gordonia neofelifaecis NRRL B-59395]
gi|326196801|gb|EGD53995.1| ribonuclease BN [Gordonia neofelifaecis NRRL B-59395]
Length = 325
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 88/211 (41%), Gaps = 5/211 (2%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P V+ I + VL + ++S + + + S+ + S+ A+ E+R
Sbjct: 76 PSVVNDLIEPTVENVLGRGRVTIMSVSFVMSLWAGSSAMSCFVSSIVHAHGQHEIRHPVW 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGRIYATMLA 188
R+ + ++ V+ V++ + P L + + PA+ +L+ G +
Sbjct: 136 QRIFALLIYMVFLVSGVLVLPLVALGPTYLHEILPDAWDPAVSDLVDW---GYFPFVGVL 192
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L+ ++ F +LPG + + + + + Y+ + Y LA+
Sbjct: 193 LIGALVTLYRFALPYPMPWHRLLPGALLAGVFFWIATYVLRFYLTALTRAGYTYGALATP 252
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L+F + LG +LGAE+NAS+ + +
Sbjct: 253 IAFLLFTFFLGFAIVLGAEMNASIEELWPAR 283
>gi|227505568|ref|ZP_03935617.1| tRNA-processing ribonuclease BN [Corynebacterium striatum ATCC
6940]
gi|227197865|gb|EEI77913.1| tRNA-processing ribonuclease BN [Corynebacterium striatum ATCC
6940]
Length = 380
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/281 (17%), Positives = 98/281 (34%), Gaps = 18/281 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
++ F A+ ++ +L+ P ++ ++A + Q D +
Sbjct: 56 VVRRVRYEFFMNAMMDRAATLTFFTVLTALPMVLGVYSIATLVLARNEEQVQKLTADFIG 115
Query: 68 GAWPEVIAKPITDEILQVL--AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P A + V+ + + +S + A SS V A S N Y VE
Sbjct: 116 TYLPPEWADAAQRIVDAVVGSTQQSTLMLVLSVVLALSSSSAYVRAFARSANAMYGRVEG 175
Query: 126 RSWYITRLISFGYVLLASV-TLVIMSFVFVAIPLALAYVRKFF---------PALGNLLL 175
R T + + + + +VI + + + + +R F L + L
Sbjct: 176 RGLVRTWTVMWLLTIAMVLGAVVIFVALMLQRDIVVGLLRPFGGVAGVSSVRSFLVDSFL 235
Query: 176 IIWNG-RIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+W R + L ++ F P + K + G + VV L Y+
Sbjct: 236 PVWQWLRWPVVAVMSVTLLALLYRFAPNVRTRKFQWLTVGSTIALLGAVVAWGLVRVYLT 295
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
S Y L +++ L L+++ FILG +++A +
Sbjct: 296 VVGARSA-YGALGTVIIALFVLWIMNTLFILGVKIDAEITR 335
>gi|206580597|ref|YP_002241248.1| tRNA-processing ribonuclease BN [Klebsiella pneumoniae 342]
gi|288937886|ref|YP_003441945.1| ribonuclease BN [Klebsiella variicola At-22]
gi|290513110|ref|ZP_06552473.1| tRNA-processing ribonuclease BN [Klebsiella sp. 1_1_55]
gi|226737449|sp|B5XZI5|Y5501_KLEP3 RecName: Full=UPF0761 membrane protein KPK_5501
gi|206569655|gb|ACI11431.1| tRNA-processing ribonuclease BN [Klebsiella pneumoniae 342]
gi|288892595|gb|ADC60913.1| ribonuclease BN [Klebsiella variicola At-22]
gi|289774492|gb|EFD82497.1| tRNA-processing ribonuclease BN [Klebsiella sp. 1_1_55]
Length = 286
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 96/269 (35%), Gaps = 10/269 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ E+ +A +++ +LLS+ P I L V I +F +
Sbjct: 20 LKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSVQIRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A ++ + + A S + ++ +LN +R R
Sbjct: 80 IPATGDVIQGYIEQFVANSSR-MTAVGAFGLIVTSLLLMYSIDSALNTIWRSTRSRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N ++ +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLDGVIDNLLRLFPLILSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ +P + + + G + + + G F YI TF +Y +Y ++ +
Sbjct: 191 AAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQLIYGVISVVPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
V++Y +LGAE+ ++ Y K
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|313676559|ref|YP_004054555.1| ribonuclease bn [Marivirga tractuosa DSM 4126]
gi|312943257|gb|ADR22447.1| ribonuclease BN [Marivirga tractuosa DSM 4126]
Length = 306
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 105/275 (38%), Gaps = 10/275 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M ++ F I ++ F EE+ + ++ + + S+ + +AG+ V
Sbjct: 1 MAKFLIKWFQIFKNSGIKFFEENPFKHSASTAYFTIFSLPAIGLVAITVAGYFYEDDVVR 60
Query: 61 TV-IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNR 118
T +D + E ++ I + + LF I + + ++ +L+ SLN
Sbjct: 61 TQFLDQINQLMGESSSEQIDSLLSSATVQSDRVLFQIIGIGTLLFSATTVFISLQDSLNT 120
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ + + I RL+S + L++ I ++++
Sbjct: 121 IWSIKAKPKKGIVKFIINRLLSLAMIAALGFLLLVSLLADTVISFIQTHIKEILDGATIY 180
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ I N I + L +IF LP AK K + G T + +V G Y+
Sbjct: 181 IIQIMNIAISLGFITLVFAIIF--KVLPDAKLKWRDVWVGAFVTTVLFVAGKFSLGFYLG 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T + + Y S + LV++Y + + GA++
Sbjct: 239 T-ANLTDSYGAAGSFVAILVWVYYSVLILLFGAQV 272
>gi|291448672|ref|ZP_06588062.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291351619|gb|EFE78523.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length = 306
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/248 (16%), Positives = 90/248 (36%), Gaps = 14/248 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 1 MLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGMIGLLGYVDEWTTTTTVASIERNIL 60
Query: 71 PEV--------IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + V + +I A + S V ++ Y +
Sbjct: 61 SASQTVLSERGVNDFAKPLLADVTTGARPDVISIGFAIALWSGSRAVNVFIDTITVMYGL 120
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R TRL++F ++A + ++ + V P V +F P ++ +++
Sbjct: 121 DGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP---DRVVEFVPWGTEVIAVLY---W 174
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L L ++ +S + +PG + WV+G+ L Y+ T+Y
Sbjct: 175 PLVILLTIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTNTVEGPTIY 234
Query: 243 AGLASIMT 250
LA+ +
Sbjct: 235 GSLAAPIA 242
>gi|313156838|gb|EFR56278.1| YihY family protein [Alistipes sp. HGB5]
Length = 434
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 101/261 (38%), Gaps = 11/261 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ +++ +E ++ ++ L+S+ P + + G + + +F
Sbjct: 34 YRLLFYTARGLLEHGMIVRSAALTFYTLMSLVPIVAVVFAVVKGFGLADGLIDNLYALFP 93
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVEMRS 127
PE I + + LA G+ AL +++ ++ + N + V RS
Sbjct: 94 QNPE-IIDYVVGFAEKALARTQGGVVAAVALVMLFWAIIRVFGSIESAFNNIWEVKVERS 152
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ Y +V +++ ++V Y ++ G+ + + +A+M
Sbjct: 153 ------VTRQYTDYIAVVMIV-PVLWVVANAVGNYTQQLLGFDGSWYFDLLS--RFASMF 203
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+++ +++ +P K K S L I +++ + + ++Y+ +Y A+
Sbjct: 204 IIWVMFTILYIIIPNTKVKFKSALMAGIVAGTLFLLFQWGYIYIQRWMTSYNAIYGSFAA 263
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
+ L++L + G EL
Sbjct: 264 LPLLLIWLQTSWQILLFGGEL 284
>gi|307727161|ref|YP_003910374.1| ribonuclease BN [Burkholderia sp. CCGE1003]
gi|307587686|gb|ADN61083.1| ribonuclease BN [Burkholderia sp. CCGE1003]
Length = 312
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 103/279 (36%), Gaps = 14/279 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
VF +I +A + F+ + MA+ + + S+ P ++ +AG F G +
Sbjct: 16 RLSNVFTVIVNAGKRFMSDRCPMMAASVGFYSAFSLAPTLLMVLAVAGWFFGEDAARGRL 75
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAY- 120
D + G + A+ + + G+ + S + +S +L +L+
Sbjct: 76 FDQMRGILGKDAAEAMQTIVEHAHRANGSGIAAVVSVVLLIVGASATFTSLNTALDVVLE 135
Query: 121 ---RVVEMRSW---YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
V S TRL+S VL LV+ + A+ Y L+
Sbjct: 136 AEKDVKNKSSITWLVRTRLVSVSMVLGLGFLLVVSLVL----DTAITYAGHAIFGNSPLV 191
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ + ++ L + ++ AK + G + + + G LF Y+
Sbjct: 192 IVTAVLQTVLGLIVLGAAFTALLRWMSDAKVSLTHAAIGGMTAAVLFSAGRHLFGLYLTH 251
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
T ++ + S+ +++LY F+ GAE A +
Sbjct: 252 AGT-ASSFGAAGSLAVLMMWLYFSAAVFLFGAETTAELA 289
>gi|320335535|ref|YP_004172246.1| ribonuclease BN [Deinococcus maricopensis DSM 21211]
gi|319756824|gb|ADV68581.1| ribonuclease BN [Deinococcus maricopensis DSM 21211]
Length = 401
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 97/273 (35%), Gaps = 19/273 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI------- 63
++ DA F ++ +A+ + + S+ P + F +AG+ +
Sbjct: 19 VLRDAFMAFGQDRAPRLAAAFAYYTMFSLAPLLFFLLAIAGYFLGQSAFQEQLFGANGHS 78
Query: 64 DVVFGAWPEVIAKPITDEI---LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + A + + L+ + + + ++ L+ +LN +
Sbjct: 79 GLLAQYFDAKTADFVKGLLASDNNQLSKGSGIATLVGFVTLFMGATGLFVQLQDALNSLW 138
Query: 121 RV-VEMRS----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
R TRL+SF V+L ++ V + A + +G
Sbjct: 139 GADPAPRGGILQVIRTRLVSFAMVVLFGALIIAFLGVNTYLS---AIAGRLGDVIGAGAF 195
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + + + ++ FLP+ + + G T + + VG L + Y
Sbjct: 196 FVRLATLLLSAGMFTLAFAAMYRFLPSIRLSWRDVWVGAAVTAVLFAVGQTLISVYFARV 255
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S S + S++ L+++Y G+ GAE+
Sbjct: 256 SPGSV-FGAAGSLVVLLLWIYYSGMIVFFGAEV 287
>gi|223041514|ref|ZP_03611716.1| tRNA-processing ribonuclease BN [Actinobacillus minor 202]
gi|223017666|gb|EEF16075.1| tRNA-processing ribonuclease BN [Actinobacillus minor 202]
Length = 284
Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 106/282 (37%), Gaps = 13/282 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M+ + F + I+ + A +++ + +L++ P I+ ++ +
Sbjct: 1 MKYTLLLFFRMF---IKRAGQNQLPVTAGYLTYNTMLAMVPLIMVVFSVFTIFPFFTEAT 57
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ ++ + I + + + +K + +S + + + + +LN
Sbjct: 58 EQLKSFIYDNFAPNIGDVVQQNLDSFVNN-SKQMGIVSTIGLVVVALMLIHNVDKALNGL 116
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ RS +I+ LL +V LV+ V +Y+ +
Sbjct: 117 WHEPRKRSIFIS-------FLLYAVILVLAPLVAGVSIAITSYIMSLSLFNEVATFSLAT 169
Query: 180 GRI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ Y L +++ ++ F+P K G +F I + +G F YI TF +Y
Sbjct: 170 TLLNYTPFLLIWLLFTLIYKFVPNTTVKFKHACAGALFAGIFFTLGKQAFIWYITTFPSY 229
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA + L+++++ +LG + A + K+
Sbjct: 230 QAIYGALAVLPIMLLWIHLSWQVVLLGGQFAAVLKELEMIKQ 271
>gi|262202174|ref|YP_003273382.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
gi|262085521|gb|ACY21489.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
Length = 426
Score = 102 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 103/287 (35%), Gaps = 15/287 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVP 60
+ + + + + ++ + LS+ P ++ G++ V
Sbjct: 92 VLRNLHRLAWRTTVNAWDHGIVGWSAQAAFWQALSLPPLLLGLLGSVGYIAGWFGPDTVD 151
Query: 61 TVIDVVFGAW-----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ + + V+ IT + VL GL ++ + + + S+ V S
Sbjct: 152 VIYERIISFADRTFSESVVNDLITPTVDNVLNRGRVGLVSLGFVLSLWAGSSAVSCFISS 211
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ A+ E+R+ R+ + + V + + P Y+ P + ++
Sbjct: 212 IVHAHDQHEVRNPVWQRIFALLLYIGFLCAAVPLLPLVALGP---NYLHDIVPQSWDPII 268
Query: 176 IIWNGRIYATMLA---LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
Y ++ L + HL LP ++ G + + + + + + Y+
Sbjct: 269 TTLIDVGYFPFVSVLLLGVLTTLYHLALPNP-LPWHRLMGGAVLAGMVFWIASYILRIYL 327
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y LA+ + L+F + LG +LGAE NA++ + K
Sbjct: 328 TAVTRADYSYGALATPIAFLLFAFFLGFAIVLGAEFNAAVQALWPAK 374
>gi|325287381|ref|YP_004263171.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
gi|324322835|gb|ADY30300.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
Length = 301
Score = 102 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 116/275 (42%), Gaps = 10/275 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGA 69
++ + ++ +D + +++ ++ +L++ +V N+ G + G + + + A
Sbjct: 18 LLKETYTSWMADDPFRLSAIVAYYTVLALPALLVIIINVVGSIWGIDIVQGNLTNEISSA 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEMRS- 127
AK I + I + TI + F + GV L+ISLN +++
Sbjct: 78 LGSDAAKAIENIIGETQNSNKNLTSTIIGIGTLLFGATGVFYQLKISLNEIWKIKPNPKA 137
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R ISF ++L+ L++ V AI Y+R+ P + L I + +
Sbjct: 138 KIWKIVTDRAISFAFILVIGFLLLVSFIVTTAISALNNYIREVLPEVLLYLAYILDFSLS 197
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++++ L+F +LP AK K ++ G I T + +V+G +L Y + + Y
Sbjct: 198 VGIISILFALMF--KYLPDAKIKWKTVWIGAILTALLFVIGKLLLGIYFGQ-ADPGSTYG 254
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
SI+ L+++ + GAE Y +
Sbjct: 255 AAGSIVLILLWVSYSSLILFFGAEFTYVYAKRYGK 289
>gi|37523699|ref|NP_927076.1| ribonuclease [Gloeobacter violaceus PCC 7421]
gi|35214704|dbj|BAC92071.1| gll4130 [Gloeobacter violaceus PCC 7421]
Length = 381
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 11/267 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVF 67
D++ + + + + +A+ ++ S+ P +V +AGF V +D +
Sbjct: 23 LDLLKETGQEWSNDKVPRLAAALAYYTFFSLAPLLVVVIAVAGFFLGPDAVRGQLDNQIA 82
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVEM- 125
G + A I + + + T AL A F +G L+ +LN + V
Sbjct: 83 GLVGQQSASAIQELVKSAYHPASGFTATAIALGAILFGVSGLFGELQDALNTIWGVAPKP 142
Query: 126 -RSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
RSW R +SF V + +++ V + Y P G + ++
Sbjct: 143 DRSWVEVVKQRFVSFSMVFGIAFLMLVSLVVSAVVSAVTGYFGALLPMPGFVPGLVD--- 199
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ + ++ LP K + G T I +V+G L Y+ S++ +
Sbjct: 200 VLVSVAITTLLFAMIYKVLPDVKIAWQDVAIGAAMTAILFVLGKSLIGLYLGQ-SSFGSS 258
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y S++ LV++Y GAE
Sbjct: 259 YGAAGSLVVVLVWVYYTVQILFFGAEF 285
>gi|83718267|ref|YP_438902.1| YihY family protein [Burkholderia thailandensis E264]
gi|83652092|gb|ABC36156.1| YihY family protein [Burkholderia thailandensis E264]
Length = 325
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 97/260 (37%), Gaps = 13/260 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA F + +MA+ I+ + S+ P +V +AG F GA V V
Sbjct: 40 DAFRRFSADRCSSMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 99
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + E R
Sbjct: 100 EAAAGVQTIVENAHRSGSRGGTAALISFAMLAIGASATFASLNTALSVIWPATETRASSV 159
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ + I +
Sbjct: 160 LGLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVAIGNLLQFSIG 215
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 216 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 274
Query: 246 ASIMTCLVFLYMLGVFFILG 265
S L++LY +LG
Sbjct: 275 GSFAVLLMWLYFSAAVLLLG 294
>gi|325928844|ref|ZP_08190011.1| putative membrane protein [Xanthomonas perforans 91-118]
gi|325540817|gb|EGD12392.1| putative membrane protein [Xanthomonas perforans 91-118]
Length = 347
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 103/283 (36%), Gaps = 19/283 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + F+E D A+ +S ALLS+ P +V L L ++
Sbjct: 42 RLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQ 100
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVV 123
+ A+ I P G S L ++ L+ +LN +R
Sbjct: 101 IGQLAGGSAAEVAQTIIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLIFRTD 160
Query: 124 EMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ R +W R+ SFG +L L++ A+ + A + PA+G
Sbjct: 161 KQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG------- 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
T+ + F++ +LP G + T + + +G YI T +
Sbjct: 214 ---YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPG 270
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S Y + +++ LV++Y V F +GA + A + +
Sbjct: 271 SA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHRK 312
>gi|188532198|ref|YP_001905995.1| ribonuclease BN [Erwinia tasmaniensis Et1/99]
gi|188027240|emb|CAO95079.1| tRNA-processing ribonuclease BN [Erwinia tasmaniensis Et1/99]
Length = 290
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 105/278 (37%), Gaps = 8/278 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + + E+ +A H++ +LLS+ P I L V +
Sbjct: 10 RLRAFWAWMKLLWQRIDEDAMTVLAGHLAYVSLLSLVPLIAVIFALFSAFPMFSDVSVQL 69
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ VF + + + + Q +A +K + + + + ++ +LN +R
Sbjct: 70 KNFVFNNFVPAAGDTVQNYLEQFVANVSK-MTAVGVGGLVVTALLLMYSIDSALNTIWRS 128
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RS + ++ +++L L+ + + ++ + + + + ++
Sbjct: 129 KVKRSLVYS--LAVYWMILTLGPLLAGASLAISS----YLLSLHWATISGVSGLVDMTLR 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + ++ +P L G + + + +G F YI F +Y +Y
Sbjct: 183 IFPLLLSCLSFWLLYSLVPTTPVAGRDALVGAVVGGVLFELGKKGFALYITMFPSYQLIY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA + +++Y +LGAE+ A++ Y K+
Sbjct: 243 GVLAVVPILFLWVYWTWCIVLLGAEITATLADYRRLKQ 280
>gi|253564998|ref|ZP_04842454.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251946463|gb|EES86840.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 311
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 110/274 (40%), Gaps = 12/274 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++F II D + F+++ +++ ++ + L S+ PF+ + F
Sbjct: 10 RLSLSLLFKIIKDTVWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTVDVFFHMD-LANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + I P++ +S + + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEVTEALRSIIENAENTDPSRSAAFVSLGISIFGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLL 174
+ + + R++SF +L+ + L+I + + L+ ++ K+ +L+
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLITFTITNIIGELSQKFIFKYPEVADSLV 188
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ I M I + LP AK K + G + T I ++G + YI
Sbjct: 189 KVVG---IIINMSVTTIIFTLIFKILPDAKIKSKDVCIGAVVTTILLLIGQWGISFYIG- 244
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ T+Y A ++ + ++Y + GAE
Sbjct: 245 IANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEF 278
>gi|257052610|ref|YP_003130443.1| ribonuclease BN [Halorhabdus utahensis DSM 12940]
gi|256691373|gb|ACV11710.1| ribonuclease BN [Halorhabdus utahensis DSM 12940]
Length = 469
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 84/277 (30%), Gaps = 16/277 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + +A+ + A +SVFP ++ + LG
Sbjct: 1 MISTARTFLGTGRNIVGLTRRSRLSFLAAATAYYAFVSVFPLVLLVIAIGSLLGGDALAE 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ V + D + + + L + L ++ Y
Sbjct: 61 AVLAAVSDVLSPSGRDVLRDALASGAGRGEATIVGVGVLF--WSGLRVFRGLTLAFGTVY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E ++ LA V+L V +AL+ P + + I+
Sbjct: 119 GTNEATTFLRQ----LRNAALALVSLGFGVVAVVVGSVALSRTGVVLPGVAQPIGIVLAL 174
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L + + I +PG + I W + +VLF Y +
Sbjct: 175 TVVLLPLYVVVP---------DVPVGIREAIPGALTVAIGWTLLSVLFRLYAGNAGQFDV 225
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + ++ + +LY +LGA +NA +
Sbjct: 226 -YGVVGGVLLFVTWLYFGATILLLGAVVNAVLARDRQ 261
>gi|311746934|ref|ZP_07720719.1| serum resistance protein [Algoriphagus sp. PR1]
gi|126578626|gb|EAZ82790.1| serum resistance protein [Algoriphagus sp. PR1]
Length = 327
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 116/283 (40%), Gaps = 10/283 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
+ + ++ + + D +++ I+ A+LS+ +V N G + G
Sbjct: 15 KFKVRHIPSLLALTFKRWAATDPARLSAIIAYYAVLSLPALLVIVVNSVGSIWGVDAVTG 74
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRA 119
+ + G A + + I + T+ + F + GV L+ISLN
Sbjct: 75 RLSSQIEGIVGADTASIVQEMIASTQLGGKSTVATVIGIGTLIFGATGVFYHLKISLNEI 134
Query: 120 YRVV--EMRSWYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ + E W+ RLISFG+VL+ L++ + A+ + Y+++ P + +L
Sbjct: 135 WELKMTENIGWFKLVKDRLISFGFVLVLGFLLLVSFVLTAALSILSEYIKEQLPDV--IL 192
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + ++ + + + +LP AK K S+ G T + +V+G VL Y
Sbjct: 193 YLAFGLDWIISISVISLLFALIFRYLPDAKIKWKSVWVGAFLTALLFVLGEVLLGLYFGA 252
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ + Y SI+ L+++ + F GAE I Y
Sbjct: 253 -TDPGSTYGAAGSIILILLWVSYSCLIFFFGAEFTKVFSIKYG 294
>gi|156936163|ref|YP_001440079.1| ribonuclease BN [Cronobacter sakazakii ATCC BAA-894]
gi|166199578|sp|A7MQD5|Y4062_ENTS8 RecName: Full=UPF0761 membrane protein ESA_04062
gi|156534417|gb|ABU79243.1| hypothetical protein ESA_04062 [Cronobacter sakazakii ATCC BAA-894]
Length = 289
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 103/270 (38%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ E+ +A +++ +LLS+ PF+ L V + VF +
Sbjct: 20 LKLLWVRIDEDHMTTLAGNLAYVSLLSLVPFVAVIFALFAAFPMFSDVSVQLRHFVFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A +K + + AL S + A+ +LN +R R
Sbjct: 80 MPATGDIIQRYIEQFVANSSK-MTAVGALGLIVTSLLLMYAIDSALNTIWRSTRQRPKVY 138
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + + +L L S V + L+L + F + ++L +L +
Sbjct: 139 SFAV-YWMILTLGPLLAGASLVISSYLLSLRWASGFNTMIDDVL-------RIFPLLLSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ +P + L G + + + +G F YI F +Y +Y LA I
Sbjct: 191 LSFWLLYSVVPTTRVPARDALIGSLVAALLFELGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y +LGAE+ ++ Y ++
Sbjct: 251 LFLWVYWTWCIVLLGAEITVTLGDYRKLRQ 280
>gi|82701586|ref|YP_411152.1| ribonuclease BN, putative [Nitrosospira multiformis ATCC 25196]
gi|123545059|sp|Q2YBW1|Y452_NITMU RecName: Full=UPF0761 membrane protein Nmul_A0452
gi|82409651|gb|ABB73760.1| tRNA-processing RNAse BN [Nitrosospira multiformis ATCC 25196]
Length = 426
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 106/271 (39%), Gaps = 7/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFG 68
D ++ + F + + +A ++ + LLS+ P + G ++ A +F + + +
Sbjct: 22 DFMHYVLVRFFQHNCTQIAGSLTFTTLLSLVPMLAIGLSVIAAFPAFAEFSDRIKEFILT 81
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A + +Q A A L I + + + +LN +RV +R
Sbjct: 82 TMVPEAANKVISVYMQQFADNAAKLTAIGIAFLGVTALALMLTIDEALNSIWRVSRLRPL 141
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
LI + + + + + + + A + P +LL + ++
Sbjct: 142 LHRLLIYWSVLTIGPLLIGASLSLTSWLMTASRGFTRDIPGGDIMLL------RLSPLVL 195
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I +L +P + + G + I + + F YI F TY +Y A+I
Sbjct: 196 TSIAFSASYLIVPNRQVAWRHAIAGGVAAAIGFEIMKEGFAFYITRFPTYQAVYGTFATI 255
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ + +LGA + AS+ + +R+
Sbjct: 256 PIFLLWLYLSWLMVLLGAVIAASLSSWRFRE 286
>gi|91787709|ref|YP_548661.1| ribonuclease BN [Polaromonas sp. JS666]
gi|91696934|gb|ABE43763.1| tRNA-processing RNAse BN [Polaromonas sp. JS666]
Length = 404
Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/258 (17%), Positives = 94/258 (36%), Gaps = 9/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
+ F E+ AS ++ + +++ PF + + + +V P+ I
Sbjct: 28 DRFREDHMGLTASSLTFTTSIALVPFFTVALAIFTAFPMFAKLQGALQAWLVQSLIPDDI 87
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q + A L + + + +LN +RV + R LI
Sbjct: 88 ARQVLGYLTQ-FSRQANKLGIAGLAVLLVTAIALILTIDRTLNGIWRVRKARPLAQRVLI 146
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + A + P LL + + G+
Sbjct: 147 YWAAITLGPLLLAASLAGTSYVLSASRGLVGVMPISLRFLLDVTQ------FFLVAGGMA 200
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P K G +F +G + + Y+ TYS +Y A++ LV+
Sbjct: 201 ALYRYVPNTYVKWSHAWVGGLFVAAGLELGKRIVSLYLSAVPTYSLVYGAFATLPILLVW 260
Query: 255 LYMLGVFFILGAELNASM 272
+Y V ++GA + A +
Sbjct: 261 IYFSWVIVLMGAVIAAYL 278
>gi|152972681|ref|YP_001337827.1| ribonuclease BN [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238892286|ref|YP_002917020.1| ribonuclease BN [Klebsiella pneumoniae NTUH-K2044]
gi|262041657|ref|ZP_06014850.1| tRNA-processing ribonuclease BN [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|166199581|sp|A6TG76|Y4136_KLEP7 RecName: Full=UPF0761 membrane protein KPN78578_41360
gi|150957530|gb|ABR79560.1| ribonuclease BN [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238544602|dbj|BAH60953.1| ribonuclease BN [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041010|gb|EEW42088.1| tRNA-processing ribonuclease BN [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 286
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 96/269 (35%), Gaps = 10/269 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ E+ +A +++ +LLS+ P I L V I +F +
Sbjct: 20 LKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSVQIRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A ++ + + A S + ++ +LN +R R
Sbjct: 80 IPATGDVIQGYIEQFVANSSR-MTAVGAFGLIVTSLLLMYSIDSALNTIWRSTRSRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N ++ +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLDGVIDNLLRLFPLILSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ +P + + + G + + + G F YI TF +Y +Y ++ +
Sbjct: 191 AAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQLIYGVISVVPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
V++Y +LGAE+ ++ Y K
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|332304723|ref|YP_004432574.1| ribonuclease BN [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172052|gb|AEE21306.1| ribonuclease BN [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 300
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 102/263 (38%), Gaps = 8/263 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEV 73
+ H + A H++ +LLS+ PFI+ + A V + ++FG +
Sbjct: 25 FVSHCQRDGITVSAGHLAYVSLLSLVPFIMVFFTILSAFPAFSEVRGDIEALIFGNFIPT 84
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + + +K + I L+ + + + +LNR ++ R T
Sbjct: 85 SGDQIQGYVAEFVGNASK-MGAIGILSLVVVALLLISNIDKTLNRIWQAKSERPIIFTFA 143
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I Y ++ ++ +++ + +A+ A + +A
Sbjct: 144 I---YWMILTLGPLLIGLSVIMSSYLVAFANS---AEAYTMGATTAMLKIVPFIASVCAF 197
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P + L G + + + F+ YI F +Y +Y +A I V
Sbjct: 198 FIIYMIVPNKRINPRHALVGAFMGALLFELSKKGFSFYITHFPSYQMIYGAMAVIPILFV 257
Query: 254 FLYMLGVFFILGAELNASMIIYY 276
++Y+ + +LGAEL + +++
Sbjct: 258 WVYLSWIVVLLGAELTHVIEVFF 280
>gi|108758048|ref|YP_633780.1| YihY family protein [Myxococcus xanthus DK 1622]
gi|108461928|gb|ABF87113.1| YihY family protein [Myxococcus xanthus DK 1622]
Length = 461
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 99/271 (36%), Gaps = 11/271 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F + F E+ A+ ++ ++ S+ P + L +F + VV
Sbjct: 40 FLAAKTVAQGFRGENLRLRAAALTYVSMFSLVPLLTVALVLLTAFHQDEFKEKLRFVVSE 99
Query: 69 AWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + + + L + ++ LA + + + L ++N + + R
Sbjct: 100 VLNPGVRGKSSQFLDRFLNPTHTVAIGSVGFLAVLLSAGSLLRQLDGAVNELWGIRRQRP 159
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ Y L V ++ F +++ P G +L+ T L
Sbjct: 160 W---RIRLLIYSGLLLVGPFFLALSFSGTGKVRVFLQSHAPYAGAFILL-------GTTL 209
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L ++ + P A ++ S L G + + W ++ + Y+ +Y L +
Sbjct: 210 VTVASLTLLYYWTPYAHVRVRSALAGGLVAGLGWTFAKQVYAAFAERSFQYNPLYGSLGA 269
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L ++Y+ + + GA L+ ++ +R
Sbjct: 270 LPLFLAWVYVSWLLVLFGARLSYAVEHTAFR 300
>gi|291619498|ref|YP_003522240.1| Rbn [Pantoea ananatis LMG 20103]
gi|291154528|gb|ADD79112.1| Rbn [Pantoea ananatis LMG 20103]
gi|327395807|dbj|BAK13229.1| tRNA-processing ribonuclease Rbn [Pantoea ananatis AJ13355]
Length = 289
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/277 (14%), Positives = 103/277 (37%), Gaps = 8/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI- 63
+ + + + A +++ +LL++ P I L + +
Sbjct: 10 LHAFWLWLKLLWKRIDNDAMTTQAGNLAFVSLLALVPLIAVVFALFAAFPVFSDISVQLK 69
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ +F + + + Q +A + + + A+ + + ++ +LN +R
Sbjct: 70 NFIFTNFMPAAGNTLQRYLEQFVANVHR-MTAVGAVGLIVTALLLMHSVDSALNAIWRSD 128
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + + + +L L S + L+L ++ + + ++ +
Sbjct: 129 KKRPLVYSFAV-YWMILTLGPLLAGASLAISSYLLSLKWIN-----VTGVTSLVDQMLRF 182
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L ++ ++ +P + L G + + + +G F Y+ F +Y +Y
Sbjct: 183 FPLLLSWLSFWLLYSIVPTQRVPSRDALTGALVAGLLFELGKKGFALYVTMFPSYQLIYG 242
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I +++Y +LGAE+ ++ Y K+
Sbjct: 243 VLAVIPILFLWVYWTWCIVLLGAEITVTLDDYRQFKR 279
>gi|293393648|ref|ZP_06637958.1| tRNA-processing ribonuclease BN [Serratia odorifera DSM 4582]
gi|291423983|gb|EFE97202.1| tRNA-processing ribonuclease BN [Serratia odorifera DSM 4582]
Length = 298
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
I+ + +A H++ +LLS+ P I L V + +F +
Sbjct: 23 LIKRIDSDGLTMLAGHLAYVSLLSLVPLITVVFALFSVFPMFSDVSMQLKSFIFNNFMPA 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + Q +A K + + + + ++ LN +R R +
Sbjct: 83 AGNVIQRYLEQFVANSNK-MTAVGTCGLIVTALLLMSSVDSVLNTIWRSKNKRPMVYSFA 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S + L+L ++ + + ++ ++ ++
Sbjct: 142 V-YWMVLTLGPLLVGASMAISSYLLSLNWLAQ-----TGVNSLVEQLLRIFPLILSWVSF 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G F Y+ F +Y +Y LA I +
Sbjct: 196 WLLYSVVPTVRVPSKDALIGALVAGLLFELGKKGFALYVTMFPSYQLIYGVLAVIPILFL 255
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 256 WVYWSWCIVLLGAEITVTLGEYRAYRQ 282
>gi|119505904|ref|ZP_01627967.1| probable ribonuclease [marine gamma proteobacterium HTCC2080]
gi|119458263|gb|EAW39375.1| probable ribonuclease [marine gamma proteobacterium HTCC2080]
Length = 418
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 95/257 (36%), Gaps = 8/257 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWP 71
+ + ++ +A+ + +L ++ P + ++ + + + +
Sbjct: 15 RYLFQRYQDDRCSEIAAALVYMSLFALVPLLTLIYAISTAVPTATDLQAQLQQFLIDNLL 74
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
++ + D + + AK L I + + + + N +R + RS
Sbjct: 75 PEASQDVADYLAS-FSEQAKNLTGIGIAILVTTAVLMLRNVESAFNNIWRNSKNRS---- 129
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++S + A ++LV + A + ++L + +
Sbjct: 130 -VVSSLLLYWAVLSLVPILIGLGIGVKAYLFSAAHAVEGIDVLGVSSALLSMLPFSLGIL 188
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
G+ +++ +P + G +F +++ LFT I S+Y+ +Y A++
Sbjct: 189 GVTALYMAVPNCAVPFRHAILGGLFVAVTFTAAKTLFTAAISN-SSYALVYGAFAAVPIF 247
Query: 252 LVFLYMLGVFFILGAEL 268
L++LY+ +LGA +
Sbjct: 248 LLWLYISWTIILLGAIV 264
>gi|255536199|ref|YP_003096570.1| Ribonuclease BN [Flavobacteriaceae bacterium 3519-10]
gi|255342395|gb|ACU08508.1| Ribonuclease BN [Flavobacteriaceae bacterium 3519-10]
Length = 319
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 101/272 (37%), Gaps = 10/272 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ + + + ++ ++ A+ S+ ++ +AG+ + +
Sbjct: 5 KKLGFFWETLKETFTEWNNSPAGTDSASLAYYAIFSIPGLLIIIIWIAGYFFGQEAIQGQ 64
Query: 63 I-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAY 120
I + + G +A I + I L I + + F ++ L+ SLN +
Sbjct: 65 ISNQIGGMMGGNVADSIEEMIAGALIDKENIFMKIVGIFSLVFGATTIFFQLQKSLNNLW 124
Query: 121 RVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
V +++ R S G +L+ L+I + I L Y+ F L+
Sbjct: 125 DVEPAPKKAFVKFFLDRANSLGMILVIGFLLMITMVLSSLISLFNNYIAAQFGLETYYLM 184
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ N L + + F+ LP A+ + S+ G T + +G L + Y F
Sbjct: 185 ELVNF--VIGFLLVMLVFAFMFKVLPDAEIRWKSVWAGATLTAALFTIGKFLLSFYFAEF 242
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ + +I+ ++++ + GAE
Sbjct: 243 -KPESAFGKAGTIILIMMWINYSCMLIFFGAE 273
>gi|238755595|ref|ZP_04616932.1| tRNA-processing ribonuclease BN [Yersinia ruckeri ATCC 29473]
gi|238706195|gb|EEP98575.1| tRNA-processing ribonuclease BN [Yersinia ruckeri ATCC 29473]
Length = 294
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 102/265 (38%), Gaps = 8/265 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIA 75
++ +A H++ +LLS+ P + L + + VF +
Sbjct: 25 RRIDQDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPIFTEISIQLKSFVFANFMPSTG 84
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I + I Q +A ++ + T+ + + ++ LN +R RS + +
Sbjct: 85 HVIQNYIEQFIANSSR-MTTVGTCGLIVTALLLIYSVDSVLNTIWRSKNKRSMVFSFAV- 142
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ VL LV S + L+L ++ + +I +L +I
Sbjct: 143 YWMVLTLGPILVGASMAISSYLLSLNWLAA-----TGMNRLIEQVLRIFPLLLSWISFWL 197
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ +P + + L G + I + +G F YI F +Y +Y LA I +++
Sbjct: 198 LYSVVPTVQVPVKDALVGALVAAILFELGKKGFALYITLFPSYQLIYGVLAVIPILFLWV 257
Query: 256 YMLGVFFILGAELNASMIIYYWRKK 280
Y +LGAE+ ++ + + ++
Sbjct: 258 YWSWCIVLLGAEITVTLGEHRFLRR 282
>gi|325300626|ref|YP_004260543.1| ribonuclease BN [Bacteroides salanitronis DSM 18170]
gi|324320179|gb|ADY38070.1| ribonuclease BN [Bacteroides salanitronis DSM 18170]
Length = 434
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 106/268 (39%), Gaps = 8/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ IIY +IE F+ + AS ++ S LLS+ P + +A G +
Sbjct: 26 RKRLYSCVKIIYLSIEQFLNDRIPVRASALTYSTLLSIIPILALLFAIARGFGFDALMEQ 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
+ ++ + + L G+F + + + ++ + S N +
Sbjct: 86 Q---IKSGVMSQQSELVFSWVNSYLQHAQSGIFIGVGLIMLLFTILMLIDNIERSFNAIW 142
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V R+ + F +LL + +VI S + + + + + F LG +L +
Sbjct: 143 QVKRPRTVFRQITDYFSMLLLLPLLIVISSGLTIVMTTYVKDLETFL-LLGPMLKFLVRL 201
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
YA +FI +++F+P K K+ I ++ + + + S Y+
Sbjct: 202 VPYALTWGMFIA---LYVFMPNTKVKLSHAWFPGILAGSAFQAFQYFYVNSQIWISNYNA 258
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A+I L++ + + GAE+
Sbjct: 259 IYGSFAAIPMFLLWTQVSWTICLFGAEM 286
>gi|33595551|ref|NP_883194.1| serum resistance protein [Bordetella parapertussis 12822]
gi|33565629|emb|CAE40275.1| serum resistance protein [Bordetella parapertussis]
Length = 296
Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 95/263 (36%), Gaps = 6/263 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGA 69
++ D+ + + + +SL + S+ P ++ +AG F G + V
Sbjct: 18 LLTDSAREWSRHRASSKGAALSLYMVFSLAPMLILVIAVAGAFFGEEAVRSELFSQVRDL 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVVEMRSW 128
E A+ I + + L + ++ + ++ L+ SL+ + V E +S
Sbjct: 78 TGERGAEVIQTVLASAHESGSGWLAALLSICVLVFSATTAFAELKASLDELWDVKEDKSG 137
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY---AT 185
+ S + L + + + + AL + ++ L + +
Sbjct: 138 LQGLVRSRMLSFGLVLVLALFLLLSLTLNAALGAAKGYYGDLWSTSAFAMAADWLSNLFS 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ V+ LP+ + + ++PG I T ++ G Y+ T + Y
Sbjct: 198 FAVVTALFAVVYKLLPSKRIPWLDVIPGAIVTAALFLAGKWGIGLYLER-GTAVSAYGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
S++ L+++Y F GA
Sbjct: 257 GSLIALLLWIYYSAQIFFFGAVF 279
>gi|117620120|ref|YP_854807.1| ribonuclease BN [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117561527|gb|ABK38475.1| YihY family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 290
Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 97/264 (36%), Gaps = 8/264 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
F ++ A +++ LLS+ P I + Q + ++ V+ +
Sbjct: 27 VWGRFQQDRLTVTAGYLAYVTLLSLVPMIAVVFGMMSAFPVFQSLKQAMEQFVYHNFVPT 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + I +A A + A + + A+ +LN +R + R
Sbjct: 87 AGEMLKEYIDGFVAN-ATNTTAVGIGALIVVALMLISAIDKNLNYIWRSTQSRPLAQAFA 145
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L V + + I + + +G LLL L +
Sbjct: 146 MYWMILTLGPVLIGASIAISSYIFSLRLFGAESLFGIGYLLL------RGLPFLFSVLTF 199
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ V+ +P K ++M G + + + F YI F +Y +Y LA+I V
Sbjct: 200 LLVYTVVPNCKVRLMHAFIGALVAATLFELAKRGFAIYITNFPSYQAIYGALATIPILFV 259
Query: 254 FLYMLGVFFILGAELNASMIIYYW 277
++Y+ + +LGAE A + Y
Sbjct: 260 WVYLSWLVVLLGAETTACLGEYER 283
>gi|330837175|ref|YP_004411816.1| ribonuclease BN [Spirochaeta coccoides DSM 17374]
gi|329749078|gb|AEC02434.1| ribonuclease BN [Spirochaeta coccoides DSM 17374]
Length = 532
Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 102/261 (39%), Gaps = 9/261 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + MAS + S+L++V P + +GA Q T ++ +
Sbjct: 127 KFLASVWYRINRDQVAIMASGMVYSSLMAVVPLVTVILMFLAPMGAIQPFITFLNDLTVE 186
Query: 70 W--PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ PE A+ + +L A L ++ + S V + +N+ Y V R+
Sbjct: 187 FFGPEAGAQLLG--LLTTFTGNATSLGIFGIISFLFTSILLVNKVWTIINQIYHVALNRN 244
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
S ++++ + L + + + +A + G++ + + + +
Sbjct: 245 PIRRFTNSISFLIIGILLLGLYISIQPIMTPIIASMNG-----GSVAGFQFFSKDFLQWV 299
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ V +P K ++ S G + + + T + T TYS +Y +AS
Sbjct: 300 IMFVIFFLVIFTVPNTKVRLSSAALGAGIGAVLFSLTKDGMTWMMGTAVTYSVIYGSIAS 359
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
I L+++Y++ V + E+
Sbjct: 360 IFFFLLWMYLMWVIILSAVEI 380
>gi|21229026|ref|NP_634948.1| ribonuclease BN [Methanosarcina mazei Go1]
gi|20907572|gb|AAM32620.1| Ribonuclease BN [Methanosarcina mazei Go1]
Length = 288
Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 108/270 (40%), Gaps = 11/270 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVID 64
D++ ++ ++E+D ++ ++ +LS+ I+F +L FL + + +I+
Sbjct: 4 GYTLDLVTRTVKEWMEDDAKTHSAALAFYFVLSLPALILFSISLGSIFLKSSRLQENIIE 63
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ G+ + I + V L I L + +SN L+ L +A+ +
Sbjct: 64 YLQGSVDQSIIDMMYALFENTPEVNFLSLGALIGFLLLLWSASNVFRQLKDFLEKAWDIK 123
Query: 124 EM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + + ++SF V+ LV + + + FP ++
Sbjct: 124 HVESSTIKDFIKNAIVSFFIVIGIGGLLVFSILIEGVLYTVSRLFQGVFPFSPSVAQYTG 183
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ A+ L L + + V+ LP K + + G + T I +G + Y + +S
Sbjct: 184 SA---ASFLILVLFFMLVYRVLPDTKLGLKPVFVGSLVTVILITIGKYAMSLYFL-YSNP 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++Y + S + + +Y + +GAE
Sbjct: 240 VSVYGAIGSTVGLFLLIYYSSIMITIGAEF 269
>gi|296139552|ref|YP_003646795.1| ribonuclease BN [Tsukamurella paurometabola DSM 20162]
gi|296027686|gb|ADG78456.1| ribonuclease BN [Tsukamurella paurometabola DSM 20162]
Length = 404
Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 49/288 (17%), Positives = 110/288 (38%), Gaps = 15/288 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ I + I ++ ++ + LS+ P ++ L G++ + F P I
Sbjct: 37 VIRSLPRIFWRTIVKSWDDSIIGQSAQAAFWQTLSLPPLLLGLLGLTGYVA-NWFGPDTI 95
Query: 64 DVVFGAW---------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
V+ G V+ + I + VL+ + +I + A + S+ + +
Sbjct: 96 GVIQGKILSFSESVFTESVVTEIIGPMVSGVLSEGRFDIVSIGFIIALWAGSSALSSFVD 155
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN-- 172
S+ A+ +R+ R + + V V+ + P + K+ PA +
Sbjct: 156 SICMAHDQHTVRNPVHQRFFAVLLYVEFLVIAVLTLPLVALGPTL---IVKYMPASWHPA 212
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ +I G + + L L ++ +PG + +++ + Y+
Sbjct: 213 VARLIDVGYLPFVVALLVGALALLYRQALPRPLPWYRQVPGAALAALIFLIASTGLRVYL 272
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+T Y LA+ + L+F + LG ++GAE NA++ + ++
Sbjct: 273 SLIATRGYSYGALATPIAFLLFTFFLGFAVMVGAEFNAALQARWPARE 320
>gi|241663259|ref|YP_002981619.1| ribonuclease BN [Ralstonia pickettii 12D]
gi|309782509|ref|ZP_07677233.1| tRNA-processing ribonuclease BN [Ralstonia sp. 5_7_47FAA]
gi|240865286|gb|ACS62947.1| ribonuclease BN [Ralstonia pickettii 12D]
gi|308918846|gb|EFP64519.1| tRNA-processing ribonuclease BN [Ralstonia sp. 5_7_47FAA]
Length = 443
Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 104/272 (38%), Gaps = 9/272 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
+ + A+ E+ +A ++ + +LS+ P + L + I+ +
Sbjct: 16 LRALARYALRRAGEDHLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFKSFRADIEGYM 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P I++PI + Q + AKGL + S + + +LN +RV
Sbjct: 76 FSNLVPGSISRPILTYLNQFSSN-AKGLTAAGLIGLVVTSVMTLLTVENALNAIWRVRHR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R R++ F ++ + L+ S + ++++ G +
Sbjct: 135 RP-LAQRVLVFWALMTFAPVLIGASLSVSSYLVSISAGYVHKLPFG-----LGVIVSLVP 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L I +++F+P + + ++ + +F Y+ TY+ +Y
Sbjct: 189 ILLSAIAFAMLYVFVPNTNVQRRDAFIAGLIAAGAFEIAKRVFGAYVAHIPTYTAVYGAF 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L ++Y+ + +LGA + +++ I
Sbjct: 249 ATLPIFLTWIYVSWLVTLLGATIASTLPIIRQ 280
>gi|157147334|ref|YP_001454653.1| ribonuclease BN [Citrobacter koseri ATCC BAA-895]
gi|166199576|sp|A8AL54|Y3126_CITK8 RecName: Full=UPF0761 membrane protein CKO_03126
gi|157084539|gb|ABV14217.1| hypothetical protein CKO_03126 [Citrobacter koseri ATCC BAA-895]
Length = 290
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + V + + E++ +A +++ +LLS+ P I L V
Sbjct: 10 RHHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSL 69
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + A+ +LN +
Sbjct: 70 QLRHFIFANFIPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ L +I N
Sbjct: 129 RSKRTRP--------KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASELNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRVFPLILSWISFWLLYSIVPTTRVPNRDAVVGAFVAAVLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|85715729|ref|ZP_01046708.1| hypothetical protein NB311A_13131 [Nitrobacter sp. Nb-311A]
gi|85697382|gb|EAQ35261.1| hypothetical protein NB311A_13131 [Nitrobacter sp. Nb-311A]
Length = 278
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 100/264 (37%), Gaps = 13/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAW 70
+ A + + ++ ++ S+ P IV +AG L H V+ +
Sbjct: 1 MKQAASDWSSHKDARQGAALAYYSVFSLGPIIVIAVAVAGLLFDHDVATAQVMSSIKDML 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMR--- 126
+ AK + + + +I + A F++ GV L+ +LN + V + +
Sbjct: 61 GDNGAKAVEAMLAGANRPATGIVASILGIGALLFAAIGVVVQLKDALNVVWEVEQSKESG 120
Query: 127 --SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ ++SF VL L++ V + A + + P ++ +
Sbjct: 121 LWHFARNYVLSFAAVLSLGFLLLVSLLVSAGLAAAGKHASAYLPE-----GVLHVVTMLV 175
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + + + +LP + PG T + + +G + YI + Y
Sbjct: 176 SFVVVMVLFAMIFKWLPDVSVGWRDVWPGAFLTAMFFEIGKAGISFYIGKQG-LESTYGA 234
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
ASI+ L+++Y ++GAE+
Sbjct: 235 AASIVVVLIWVYYTSQIILMGAEV 258
>gi|254479831|ref|ZP_05093079.1| Ribonuclease BN-like family protein [marine gamma proteobacterium
HTCC2148]
gi|214039393|gb|EEB80052.1| Ribonuclease BN-like family protein [marine gamma proteobacterium
HTCC2148]
Length = 409
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 102/277 (36%), Gaps = 8/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F ++ I F + A+ ++ +L ++ P + +A + Q + +
Sbjct: 8 FFGIWHRIRYLFSRFKADRCSENAAALTYMSLFAMVPLLTVLYTMASAIPTFQGLEEQVQ 67
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+F + + I + AK L + + + + + N +R
Sbjct: 68 SFLFEHLMPDTSSEVESYISD-FSRQAKNLTGPGIIFLVITAVLMLRNIEKAFNMIWRAR 126
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RS + L+ + + LA V L + + + + +F ++ +
Sbjct: 127 ENRSSVSSFLLYWAVLSLAPVALGLALGLSTYLSSFSQVLDQF-----DIFGVKALLLKL 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ ++ +P + + G + +++ LFT +V S+Y+ +Y
Sbjct: 182 TPLMLSTAAFTLLYAAVPNCRVPFKHTVVGGLVAALAFHAARALFTDLVVG-SSYTFIYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A++ L+++Y+ ++G L S+ Y ++
Sbjct: 241 AFAAVPLFLLWIYLSWNIVLMGGILVHSLSGYQNEEQ 277
>gi|282879849|ref|ZP_06288576.1| YihY family protein [Prevotella timonensis CRIS 5C-B1]
gi|281306243|gb|EFA98276.1| YihY family protein [Prevotella timonensis CRIS 5C-B1]
Length = 451
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 105/268 (39%), Gaps = 6/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +Y AI F + A+ ++ S LL++ P +A G +++
Sbjct: 28 KYLLVSILKKLYLAITFFFTKGTSDYAAALTYSTLLAIVPICAVVFAIARGFGFSKYIEE 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
E A I + ++ + + + L + + + N +
Sbjct: 88 WFRQALSG-QEQAADIIIRFVNSYLIHTHSGVILGVGLLFMLWTVLRLTRTIEQTFNSIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V + R + T V + + +V++S + + + + + L +L I N
Sbjct: 147 QVKQERGLFRTVTDYLAMVFMMPIMIVLISGISIFMTTFVDRASSYM-LLAPILQIALNL 205
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + +F+G +++F+P K K + L I ++ + + H + S+Y+
Sbjct: 206 MPFVIISCVFVG---LYIFMPNTKVKFSAALAPGILAGVAMQFLQLFYIHGQMLLSSYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ ++++ + + GA+L
Sbjct: 263 IYGTFAALPLFMLWMQISWTICLFGAQL 290
>gi|146300224|ref|YP_001194815.1| putative ribonuclease BN [Flavobacterium johnsoniae UW101]
gi|146154642|gb|ABQ05496.1| putative ribonuclease BN [Flavobacterium johnsoniae UW101]
Length = 305
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 44/286 (15%), Positives = 113/286 (39%), Gaps = 10/286 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
++ ++ ++ + F +++ +++ +S + ++ P ++ + GF G
Sbjct: 3 IKNILKKIWFLLKNTFLEFNDDNAIKLSAALSYYTIFALPPLLIIIITICGFFFGEDAVT 62
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNR 118
+ + G A I + I V T+ + ++GV A ++ S+N
Sbjct: 63 GQLYGQINGMVGNSAAIQIQEAIKNVQLSGDNMFATVFGIVMLLIGASGVFAEIQSSINF 122
Query: 119 AYRVVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ + + + RL+SF + +++ V + L + ++ +FP +
Sbjct: 123 IWGLRAKPDKGIKKFIQNRLMSFSMIASVGFLMLVSLLVNTTLDLVSSRLKIYFP--EST 180
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ + + + + ++ + + LP K + G T + +++G Y+
Sbjct: 181 VYLFYVVNVVIVLASITLLFTIIFRTLPDGKIRWKDAFIGSGVTAVLFMIGKFAIGFYLG 240
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ST +++Y S++ LV++Y + GAE Y K
Sbjct: 241 S-STVASVYGAAGSVIIILVWVYYSAIILYFGAEFTKVYAKSYGGK 285
>gi|116696508|ref|YP_842084.1| ribonuclease BN [Ralstonia eutropha H16]
gi|113531007|emb|CAJ97354.1| Ribonuclease BN [Ralstonia eutropha H16]
Length = 357
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 58/284 (20%), Positives = 112/284 (39%), Gaps = 15/284 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
++ AI + + + +S L S+ P +V ++AG F GA + +
Sbjct: 72 LRVVAAAINSWFAHRAASKGAALSFYMLFSLAPILVLVISIAGLFFGAEAARGEIFSQLE 131
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVV--E 124
G E A I + + G+ + A +++ L+ SL+ + V E
Sbjct: 132 GLVGEQGATAIQEILAATHRAGGSGMAALVATGILLVGATSAFAELKSSLDDIWHVPVPE 191
Query: 125 MRSW---YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWN 179
W TRL+SF VL+ + L++ V A+ + + + + ++
Sbjct: 192 TAGWQQLLRTRLLSFSLVLVLAFMLLVSLIVNAALAVVERLWGQLWTQSWFAPVADVLST 251
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+A + ALF + LP A+ + G + T + + +G L Y+ S +
Sbjct: 252 AFSFAVVTALF---AVIFKMLPNARIAWRDVTMGAVITALLFSIGKRLIGLYLGN-SAVA 307
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW--RKKP 281
+ Y S++ ++++Y F GAEL + + R KP
Sbjct: 308 SSYGAAGSVVALMLWVYYSAQIFFFGAELTRQYALQFGSLRGKP 351
>gi|167856267|ref|ZP_02478999.1| ribonuclease BN [Haemophilus parasuis 29755]
gi|167852591|gb|EDS23873.1| ribonuclease BN [Haemophilus parasuis 29755]
Length = 282
Score = 101 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 101/259 (38%), Gaps = 8/259 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
I F + + +++ + LLS+ P I+ ++ L Q + ++V+
Sbjct: 7 FFKLFIHRFQQNKIAVYSGYLTYTTLLSLVPLIMVVFSVFTLLPIFEQATAQLKELVYDN 66
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + +K + IS + + + ++ +LN + + RS
Sbjct: 67 FAPSAGDMVQQYLEMFVDN-SKKMGIISIIGLVVVAVMLISSIDNALNEIWHNTKKRSVI 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+V+ +V + F +I ++ + L + + +
Sbjct: 126 ------LSFVVYLAVLIFAPIFAGASIAISSYIFSLEMFSQDGLFSFSHHLLKFIPFVLT 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ V+L +P + K G +F + + +G +F YI TF +Y +Y LA+I
Sbjct: 180 WLLFALVYLIVPNTQVKFRHAAVGALFAGVFFTLGKQIFIWYITTFPSYQAIYGALATIP 239
Query: 250 TCLVFLYMLGVFFILGAEL 268
+V++++ +LG +
Sbjct: 240 IMIVWIHLSWRVVLLGGQF 258
>gi|219871529|ref|YP_002475904.1| ribonuclease BN [Haemophilus parasuis SH0165]
gi|288559218|sp|B8F6K4|Y1376_HAEPS RecName: Full=UPF0761 membrane protein HAPS_1376
gi|219691733|gb|ACL32956.1| ribonuclease BN [Haemophilus parasuis SH0165]
Length = 282
Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 101/259 (38%), Gaps = 8/259 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
I F + + +++ + LLS+ P I+ ++ L Q + ++V+
Sbjct: 7 FFKLFIHRFQQNKIAVYSGYLTYTTLLSLVPLIMVVFSVFTLLPIFEQATAQLKELVYDN 66
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + +K + IS + + + ++ +LN + + RS
Sbjct: 67 FAPSAGDMVQQYLEMFVDN-SKKMGIISIIGLVVVAVMLISSIDNALNEIWHNTKKRSVI 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+V+ +V + F +I ++ + L + + +
Sbjct: 126 ------LSFVVYLAVLIFAPIFAGASIAISSYIFSLEMFSQDGLFSFSHHLLKFIPFVLT 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ V+L +P + K G +F + + +G +F YI TF +Y +Y LA+I
Sbjct: 180 WLLFALVYLIVPNTQVKFRHAAVGALFAGVFFTLGKQIFIWYITTFPSYQAIYGALATIP 239
Query: 250 TCLVFLYMLGVFFILGAEL 268
+V++++ +LG +
Sbjct: 240 IMIVWIHLSWQVVLLGGQF 258
>gi|168830331|gb|ACA34427.1| Rbn [uncultured bacterium pTW3]
Length = 425
Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 99/259 (38%), Gaps = 8/259 (3%)
Query: 21 EEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
++ + A +S + + ++ P +V L+GF ++ + VF + A+ +
Sbjct: 33 DDRLFEAAGALSYTTVFALVPLSMVAFGVLSGFPVFEKWGDRLTRYVFDNFVPSSARALE 92
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + LA L + +A + ++ + NR +RV R + L+ +
Sbjct: 93 RYLAEFLAN-TGQLTAVGVIALVISVLITLTSVEAAFNRIWRVKTTRPRFGRFLV--YWT 149
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
+L L + + ++ V + P L++ A M +
Sbjct: 150 VLTLGALGAAASLALSTQFFALAVFQTEPGRALEALML----RLAPMTIELAAFATIFRM 205
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
+P + G + + + + Y+ +F +Y +Y LA+ L+++Y
Sbjct: 206 VPHRTVHWRHAVAGAVLSVALFELLRWGLGLYLGSFGSYQKIYGKLAAAPILLLWIYFGW 265
Query: 260 VFFILGAELNASMIIYYWR 278
V +LGA ASM + ++
Sbjct: 266 VSILLGASFAASMSAFRYQ 284
>gi|187929074|ref|YP_001899561.1| ribonuclease BN [Ralstonia pickettii 12J]
gi|187725964|gb|ACD27129.1| ribonuclease BN [Ralstonia pickettii 12J]
Length = 443
Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 104/272 (38%), Gaps = 9/272 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
+ + A+ E+ +A ++ + +LS+ P + L + I+ +
Sbjct: 16 LRALARYALRRAGEDHLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFKSFRADIEGYM 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P I++PI + Q + AKGL + S + + +LN +RV
Sbjct: 76 FSNLVPGSISRPILTYLNQ-FSTNAKGLTAAGLIGLVVTSVMTLLTVENALNAIWRVRHR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R R++ F ++ + L+ S + ++++ G +
Sbjct: 135 RP-LAHRVLVFWALMTFAPVLIGASLSVSSYLVSISAGYVHKLPFG-----LGVIVSLVP 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L I +++F+P + + ++ + +F Y+ TY+ +Y
Sbjct: 189 ILLSAIAFAMLYVFVPNTNVERRDAFIAGLIAAGAFEIAKRVFGAYVAHIPTYTAVYGAF 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L ++Y+ + +LGA + +++ I
Sbjct: 249 ATLPIFLTWIYVSWLVTLLGATIASTLPIIRQ 280
>gi|108799147|ref|YP_639344.1| ribonuclease BN [Mycobacterium sp. MCS]
gi|119868262|ref|YP_938214.1| ribonuclease BN [Mycobacterium sp. KMS]
gi|126434755|ref|YP_001070446.1| ribonuclease BN [Mycobacterium sp. JLS]
gi|108769566|gb|ABG08288.1| ribonuclease BN [Mycobacterium sp. MCS]
gi|119694351|gb|ABL91424.1| ribonuclease BN [Mycobacterium sp. KMS]
gi|126234555|gb|ABN97955.1| ribonuclease BN [Mycobacterium sp. JLS]
Length = 321
Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 104/279 (37%), Gaps = 15/279 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
V + + ++ ++ ++ + LS+ P ++ ++ F P V+
Sbjct: 13 HHVRRTLVRTLSKSWDDSIFSESAQAAFWCALSLPPLLLGMLGSLAYIA-PLFGPDVLPT 71
Query: 66 VFGAW---------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ V+ + I + ++ + ++ + + + S+ + A S+
Sbjct: 72 IENQLIRTANSFFSSNVVNEIIAPTVSDIVKGARGEVVSLGFVISLWAGSSAISAFVDSI 131
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
A+ +R R + G ++ V V + + P +A + +
Sbjct: 132 VEAHDQTPLRHPVRQRFYALGLYVVMLVFAVGTAPLLALGPRKVAAL-----IPDEWDAV 186
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ G A L+L + + ++ ++ G I + ++V + Y+ +
Sbjct: 187 LRFGYWPALFLSLLVAVNILYRVSLPKPLPSHRLILGSILATVVFLVTTLGLRVYLTWIT 246
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ Y LA+ + L+F + LG ++GAELNA++
Sbjct: 247 STGYTYGALATPIAFLLFAFFLGFAIMIGAELNAAVEEQ 285
>gi|254363108|ref|ZP_04979162.1| ribonuclease BN [Mannheimia haemolytica PHL213]
gi|153094995|gb|EDN75558.1| ribonuclease BN [Mannheimia haemolytica PHL213]
Length = 281
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 108/276 (39%), Gaps = 8/276 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ I + + E + A +++ S +L++ PFIV ++ F +
Sbjct: 2 LNRLWRFIKLFAKRYNENNIAISAGYLTYSTMLAIVPFIVVLFSIFTFFPIFHEANEQLK 61
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ + ++ +++ I ++ AK + +S + + ++++ +LN +
Sbjct: 62 AFIYDNFAPSASEMVSEYIELFVSN-AKQMGLVSFIGLFVVTIMLIKSIDEALNTIWHDN 120
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + L+ F +L + + + + +LG LL +
Sbjct: 121 RQRPMWFSFLLYFLILLFGPLLAGASIAISTYVMSLSIFNGNGALSLGQHLLEL------ 174
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L +++ V+ F+P K K G + I + +G F YI F +Y +Y
Sbjct: 175 MPFLLIWLLFTLVYKFIPIRKVKFQHAAIGALMAAIFFTLGKKAFIWYITAFPSYQAIYG 234
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA + L+++ + +LG + A + K
Sbjct: 235 ALAVLPIMLLWIQLSWQVVLLGGQFAAVLDEMETDK 270
>gi|254821654|ref|ZP_05226655.1| hypothetical protein MintA_17092 [Mycobacterium intracellulare ATCC
13950]
Length = 333
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 109/279 (39%), Gaps = 13/279 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG---AHQFVPTV 62
++ I A+ ++ ++ ++ + LS+ P ++ ++ +P +
Sbjct: 11 HHIWRITLRALSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGTMAYVAPLFGPDMLPNI 70
Query: 63 IDVVFGAW-----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + P V+ + I + + + + ++ + + + S+ + A S+
Sbjct: 71 LRQLLSTAHSVFSPSVVNEIIEPTVRDIASNARGEVVSLGFIISLWAGSSAISAFVDSVV 130
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
A+ +R R + ++ V +V + + V P V + P L ++
Sbjct: 131 EAHDQTPLRHPVRQRFFALFLYVVMLVVVVATAPLVVVGP---RKVEEHIPL--GLSNVL 185
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G A ++ L +G++ ++ ++ G + +V + Y+ ++
Sbjct: 186 RYGYYPALIIGLTLGVMILYRVALPEPLPSHRLILGAMLATTVFVTATLGLRFYLRWITS 245
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L++ + L+F + G +LGAELNA++ +
Sbjct: 246 TGYTYGALSTPIAFLLFAFFGGFAIMLGAELNAAVQEEF 284
>gi|188994855|ref|YP_001929107.1| putative ribonuclease BN [Porphyromonas gingivalis ATCC 33277]
gi|188594535|dbj|BAG33510.1| putative ribonuclease BN [Porphyromonas gingivalis ATCC 33277]
Length = 475
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 105/272 (38%), Gaps = 9/272 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ I +F++ D AS ++ +LS+ P + +A G Q V D +
Sbjct: 69 FKSVFLTIRYFIQNDLATQASALTYRTILSIVPMLAVLIGIAKGFGIQQVVH---DWLKE 125
Query: 69 AWP--EVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + + LA G+F + + Y + + + + ++ +
Sbjct: 126 YLPGHQQELEQALGYVENYLAQVQGGIFVGVGLIVLLYTVFSLIATVEDTFTDIWQTNKR 185
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+W + G L + + S + + + + G +L +I N Y
Sbjct: 186 RTWKRRVIDYMGAFFLLPILITASSGLTLMMTTIKGTYFSEYILFGPMLELILNLIPYVI 245
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF G+ ++ LP + + I + + L+ I+ S Y+ +Y
Sbjct: 246 IVLLFTGM---YIVLPTVNVRFWPAFISGVLAGIVFQIFQALYISGILWISKYNAIYGSF 302
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++ + + GA+L+ S+
Sbjct: 303 AAVPLLLLWIQLSWTIVLFGAQLSFSIQNVRK 334
>gi|284053193|ref|ZP_06383403.1| ribonuclease BN [Arthrospira platensis str. Paraca]
gi|291567154|dbj|BAI89426.1| serum resistance locus BrkB-like protein [Arthrospira platensis
NIES-39]
Length = 295
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 110/272 (40%), Gaps = 11/272 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TV 62
+ + I + ++ +A+ ++ + S+ P ++ +AG + V
Sbjct: 2 NLATAKSLFKETITEWQKDKVPILAAALAYYMVFSLAPLLMIVIAVAGSIVGEAVAQKEV 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
ID + E A I + I + + TI + F++ + A L+ SLN +
Sbjct: 62 IDQLETLMGEQGASVIANAIQSQFQPSSSIITTIIGVVTLLFAATTIFAQLKESLNIIWH 121
Query: 122 VVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V + +R++S VL+ + L+ + + ++ + G + +
Sbjct: 122 VEVRPGQGIWEFIRSRILSIIMVLIVGLLLLSSLAISSFLSGMSDWLDEVISMPGFVRSL 181
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I NG + + + I ++ LP K + G T I +++G + Y+ +
Sbjct: 182 IDNG---VSFILITILFGQIYRILPDVKIAWSDVAVGSGITAILFIIGRTFISFYLGR-A 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T ++ Y +S + L++++ F+LGAEL
Sbjct: 238 TVASAYGAASSFVVLLLWIFYSCQIFLLGAEL 269
>gi|254281948|ref|ZP_04956916.1| tRNA-processing ribonuclease BN [gamma proteobacterium NOR51-B]
gi|219678151|gb|EED34500.1| tRNA-processing ribonuclease BN [gamma proteobacterium NOR51-B]
Length = 411
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/264 (16%), Positives = 101/264 (38%), Gaps = 8/264 (3%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAK 76
+ ++ +A+ + +L ++ P + ++A + I D + +
Sbjct: 21 RYRDDRCSEIAAALVYMSLFALVPLLTVLFSVASAIPTFSGAENQIQDFLVEKLVPESST 80
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ D + + AK L + + + + +LN +R E R IS
Sbjct: 81 EVADYLTD-FSSQAKNLTGVGIGILFVTAVLMLRNIERALNNIWRNSENRG-----AISS 134
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+ A +++ + V A + A ++L + +GL +
Sbjct: 135 FLLYWAVLSMAPVMMGLVFGVHAFLFAAAKSLADFDVLGVSRLLLPLVPFSLSTLGLSLL 194
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+L +P ++ L G +F ++ V VLFT + S+Y+ +Y A++ L++LY
Sbjct: 195 YLAVPNSQVPFKHALVGGVFAAGAFSVARVLFTTVMAN-SSYTLVYGAFAAVPLFLLWLY 253
Query: 257 MLGVFFILGAELNASMIIYYWRKK 280
+ ++G + S+ Y ++
Sbjct: 254 VTWNIVLMGGIVVHSLSAYQSEEQ 277
>gi|166710400|ref|ZP_02241607.1| ribonuclease BN [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 320
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/283 (20%), Positives = 102/283 (36%), Gaps = 19/283 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + F+E D A+ +S ALLS+ P +V L L ++
Sbjct: 15 RLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQ 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVV 123
V A I P G S L ++ L+ +LN +R
Sbjct: 74 VAQLAGGSAADVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLIFRTD 133
Query: 124 EMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ R +W R+ SFG +L L++ A+ + A + PA+G
Sbjct: 134 KERLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG------- 186
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
T+ + F++ +LP G + T + + +G YI T +
Sbjct: 187 ---YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGRYAIGVYIATAAPG 243
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S Y + +++ LV++Y V F +GA + A + +
Sbjct: 244 SA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHRK 285
>gi|301163995|emb|CBW23550.1| putative ribonuclease [Bacteroides fragilis 638R]
Length = 311
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 110/274 (40%), Gaps = 12/274 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++F II D I F+++ +++ ++ + L S+ PF+ + F
Sbjct: 10 RLSLSLLFKIIKDTIWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTVGVFFHMD-LANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + I P++ +S + + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEVTEALRSIIENAENTAPSRSAAFVSLGISIFGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLL 174
+ + + R++SF +L+ + L+I + + L+ ++ K+ +L+
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLITFTITNIIGELSQKFIFKYPEVADSLV 188
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ I M I + LP AK K + G + T I ++G + YI
Sbjct: 189 KVVG---IIINMSVTTIIFTLIFKILPDAKIKSKDVCIGAVVTTILLLIGQWGISFYIG- 244
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ T+Y A ++ + ++Y + GAE
Sbjct: 245 IANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEF 278
>gi|53714497|ref|YP_100489.1| putative serum resistance protein BrkB [Bacteroides fragilis YCH46]
gi|52217362|dbj|BAD49955.1| putative serum resistance protein BrkB [Bacteroides fragilis YCH46]
Length = 311
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 108/274 (39%), Gaps = 12/274 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++F II D + F+++ +++ ++ + L S+ PF+ + F
Sbjct: 10 RLSLSLLFKIIKDTVWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTVGVFFHMD-LANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALA-AAYFSSNGVEALRISLNRAY 120
+ + + + + I + +L + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEVTEALRSIIENAENTDSSRSAAFVSLGISILGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLL 174
+ + + R++SF +L+ + L+I + + L+ ++ K+ A +L+
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLITFTITNIIGELSQKFIFKYPEAADSLV 188
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ I M I + LP AK K + G + T I ++G + YI
Sbjct: 189 KVVG---IIINMSVTTIIFTLIFKILPDAKIKSKDVCIGAVVTTILLLIGQWGISFYIG- 244
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ T+Y A ++ + ++Y + GAE
Sbjct: 245 IANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEF 278
>gi|259906715|ref|YP_002647071.1| ribonuclease BN [Erwinia pyrifoliae Ep1/96]
gi|224962337|emb|CAX53792.1| tRNA-processing ribonuclease BN [Erwinia pyrifoliae Ep1/96]
gi|283476498|emb|CAY72313.1| tRNA processing exoribonuclease BN [Erwinia pyrifoliae DSM 12163]
gi|310765938|gb|ADP10888.1| Ribonuclease BN [Erwinia sp. Ejp617]
Length = 290
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 101/278 (36%), Gaps = 8/278 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
I + E+ +A H++ +LLS+ P I L V +
Sbjct: 10 RLRAFCAWIKLLCQRIDEDAMTVLAGHLAYVSLLSLVPLIAVVFALFSAFPMFSDVSVQL 69
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ V + + + + Q +A +K + + + + ++ +LN +R
Sbjct: 70 KNFVINNFVPAAGTTVQNYLEQFVANVSK-MTAVGVGGLVVTALLLMYSIDSALNTIWRS 128
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RS + + Y ++ ++ ++ L+ + L+ I+
Sbjct: 129 KVKRSLVYSLAV---YWMILTLGPLLAGASLAISSYLLSLHWATIGGVSGLVDIV---LR 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + ++ +P L G I + + +G F YI F +Y +Y
Sbjct: 183 IFPLLLSCLSFWLLYSLVPTTPVAGRDALVGAIVGGVLFELGKKGFALYITLFPSYQLIY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA++ +++Y +LGAE+ A++ Y K+
Sbjct: 243 GVLAAVPILFIWIYWTWCIVLLGAEITATLADYRRLKQ 280
>gi|58583750|ref|YP_202766.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58428344|gb|AAW77381.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 338
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/283 (20%), Positives = 103/283 (36%), Gaps = 19/283 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + F+E D A+ +S ALLS+ P +V L L ++
Sbjct: 33 RLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQ 91
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVV 123
V A+ I P G S L ++ L+ +LN +R
Sbjct: 92 VAQLAGGSAAEVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLIFRTD 151
Query: 124 EMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ R +W R+ SFG +L L++ A+ + A + PA+G
Sbjct: 152 KERLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG------- 204
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
T+ + F++ +LP G + T + + +G YI T +
Sbjct: 205 ---YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGRYAIGVYIATAAPG 261
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S Y + +++ LV++Y V F +GA + A + +
Sbjct: 262 SA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHRK 303
>gi|134096441|ref|YP_001101516.1| putative ribonuclease RNase BN (RBN) transmembrane protein
[Herminiimonas arsenicoxydans]
gi|133740344|emb|CAL63395.1| Putative ribonuclease BN [Herminiimonas arsenicoxydans]
Length = 298
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 109/273 (39%), Gaps = 11/273 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + + +A++ +V++ +M + ++ + S+ P ++ +AGF
Sbjct: 4 NHLQQAWSLTKEAVQAWVDDFAPSMGAALAYYTIFSLAPMLIIVIAIAGFFFGQTTAQGE 63
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAY 120
I + + +L+ ++ P +G+ T+ L ++ L+ +L+R +
Sbjct: 64 IILQLRGMVGDTGAAAVEGLLKSVSKPGQGIIAATLGILTLMIGATAVFGELQSALDRIW 123
Query: 121 RVVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+V RL+SFG ++ L++ + A+ + +L
Sbjct: 124 KVPPEAKGGIWKMLRKRLLSFGMIMGLGFMLLVSLILSAALAALGKWWGDVLGTWNIVLQ 183
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ + + ALF ++ F+P A + G T + + +G L Y+
Sbjct: 184 VLNMAVSFGVVTALF---ALIYKFMPRATIPWRDVWVGAGVTALLFTLGKFLIGLYLGK- 239
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ ++ + S++ L ++Y F+LGAE
Sbjct: 240 TNMASGFGAAGSLVILLAWIYYSAQIFLLGAEF 272
>gi|330827853|ref|YP_004390805.1| YihY family protein [Aeromonas veronii B565]
gi|328802989|gb|AEB48188.1| YihY family protein [Aeromonas veronii B565]
Length = 290
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 96/264 (36%), Gaps = 8/264 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
F ++ A +++ LLS+ P I + Q + ++ V+ +
Sbjct: 27 VWGRFQQDRLTVTAGYLAYVTLLSLVPMIAVVFGMMSAFPVFQSLKQAMEQFVYHNFVPT 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I +A A + A + + A+ +LN +R + R
Sbjct: 87 AGDMLKEYIDGFVAN-ATNTTAVGIGALVVVALMLISAIDKNLNYIWRSTQGRPLAQAFA 145
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L V + + I + + +G LLL L +
Sbjct: 146 MYWMILTLGPVLIGASIAISSYIFSLRLFGAESLFGIGYLLL------RGLPFLFSVLTF 199
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ V+ +P K +++ G + + + F YI F +Y +Y LA+I V
Sbjct: 200 LLVYTVVPNCKVRLIHAFIGALVAATLFELAKRGFAIYITNFPSYQAIYGALATIPILFV 259
Query: 254 FLYMLGVFFILGAELNASMIIYYW 277
++Y+ + +LGAE A + Y
Sbjct: 260 WVYLSWLVVLLGAETTACLGEYEK 283
>gi|292486531|ref|YP_003529397.1| tRNA processing exoribonuclease BN [Erwinia amylovora CFBP1430]
gi|292897768|ref|YP_003537137.1| tRNA-processing ribonuclease BN [Erwinia amylovora ATCC 49946]
gi|291197616|emb|CBJ44710.1| tRNA-processing ribonuclease BN [Erwinia amylovora ATCC 49946]
gi|291551944|emb|CBA18981.1| tRNA processing exoribonuclease BN [Erwinia amylovora CFBP1430]
Length = 290
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 107/278 (38%), Gaps = 8/278 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ I + E+ +A H++ +LLS+ P I L V +
Sbjct: 10 RLRAFWTWIKLLWQRIDEDAMTVLAGHLAYVSLLSLVPLIAVVFALFTAFPMFSDVSVQL 69
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ F + + + Q +A ++ + + + + ++ +LN +R
Sbjct: 70 KNFAFHNLVPAAGTTVQNYLEQFVANVSR-MTAVGVGGLVVTALLLMYSIDSALNTIWRS 128
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R + ++ +++L L+ + + ++ + + +G L ++I
Sbjct: 129 KVKRPLVYS--LAVYWMILTLGPLLAGASLAISS----YLLSLHWATIGGLSVLIDMVLR 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + ++ +P A L G I I + +G FT YI TF +Y +Y
Sbjct: 183 IFPLLLSCLSFWLLYSLVPTAPVAGHDALVGAIVGGILFELGKKGFTLYITTFPSYQLIY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA + +++Y +LGAE+ A++ Y K+
Sbjct: 243 GVLAVVPILFLWVYWTWCIVLLGAEITATLADYRRLKR 280
>gi|283851887|ref|ZP_06369164.1| ribonuclease BN [Desulfovibrio sp. FW1012B]
gi|283572803|gb|EFC20786.1| ribonuclease BN [Desulfovibrio sp. FW1012B]
Length = 451
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/264 (18%), Positives = 109/264 (41%), Gaps = 10/264 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANL---AGFLGAHQFVPTVIDVVFGAWPEV 73
F++ G AS +S + +LS+ PF+ +L G + Q ++ + G E
Sbjct: 46 RSFLDTRGILQASALSYTTVLSIVPFLAVAFSLAKGLGLYNSPQVRGLLLRLFAGR--ED 103
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+A I I + L + + + + + + + +++N A+ + + + +R
Sbjct: 104 VADQILLYIQ---NTNLQTLGAVGTILLLFTAVSLLFNIEVAVNAAWGMAPKATVW-SRF 159
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ ++ L+ + A AL + A+ + + A ++ ++
Sbjct: 160 TNYFVFIVLCPPLLFAALSVTATLQALDVTHRLL-AISFISGLEKALLTIAPVVVIWGVF 218
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ FLP + K S L G + W V + + ++Y+ +Y A I LV
Sbjct: 219 YLLYQFLPNTRVKPASALLGAVTAGTVWQVVQWAYLKFQFGSASYNAIYGSFAQIPLLLV 278
Query: 254 FLYMLGVFFILGAELNASMIIYYW 277
+LY+ V +LGA+++ + Y
Sbjct: 279 WLYVSWVIVLLGAQISHTSQCYRQ 302
>gi|302035978|ref|YP_003796300.1| putative tRNA-processing ribonuclease BN [Candidatus Nitrospira
defluvii]
gi|300604042|emb|CBK40374.1| putative tRNA-processing ribonuclease BN [Candidatus Nitrospira
defluvii]
Length = 283
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 100/263 (38%), Gaps = 6/263 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV--PTVIDVV 66
+ + + F ++A+ ++ +LLS+FP + F+ + + ++ +
Sbjct: 4 LSFLSNVFDTFRRRGCLSLAASLAFFSLLSLFPMVFLLLYGISFIVSQDVIGYQFLLGFL 63
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G P + + + +I +V LA +FS+ L ++N + R
Sbjct: 64 KGFLP-SMGERLARDIRRVAEQEEVR--WAVFLAFGWFSALVFYELDYAMNTVFGTAAKR 120
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYAT 185
I+ L++ + + +I AI L AY +F L + +
Sbjct: 121 HPLISTLVAVALIWMLGFLTLISFVATQAIELLTAYAPRFLGMNLVAIAAHDFLIAYSLP 180
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L F + ++ FLP + G + WV LF Y+ + Y+ +Y L
Sbjct: 181 FLLAFASVTCLYRFLPHQRPTWREATIGGAVFSLLWVSAKALFVTYLEDAAVYTQLYGSL 240
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
++ ++++Y +LGA +
Sbjct: 241 LEVVLLMLWVYYSSALVLLGAVV 263
>gi|149190617|ref|ZP_01868885.1| ribonuclease BN [Vibrio shilonii AK1]
gi|148835500|gb|EDL52469.1| ribonuclease BN [Vibrio shilonii AK1]
Length = 315
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 92/261 (35%), Gaps = 8/261 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWP 71
+ + A +++ LLS+ P + ++ V+ D + +
Sbjct: 25 RYLAQRMSHDRINVNAGYLAYITLLSIVPLLTVLLSVLSSFPVFSNTGEVLQDFIIQHFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ +++ ++ + I + + + + +LN +RV R +
Sbjct: 85 PAAGDAVYSALVEFVSN-TGKMTAIGSAFLFIAALMLISNIDKNLNYIWRVRVKRRMVFS 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + + A +L + + + F
Sbjct: 144 FSMYWMILTLGPILIGASIVGTSYVTSLKALEHNVVSGAFSLFIA------WLPAIMAFF 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
I +++ +P K + G I + + + F +YI F +Y +Y LA+I
Sbjct: 198 AFIGLYMLVPNKKVHFSHAVVGSIVATLLFEISKKGFAYYITQFPSYQLIYGALAAIPIL 257
Query: 252 LVFLYMLGVFFILGAELNASM 272
+++Y+ ++GAE A+M
Sbjct: 258 FLWIYLCWFIVLIGAEFTAAM 278
>gi|329120705|ref|ZP_08249367.1| YihY family protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327460502|gb|EGF06838.1| YihY family protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 409
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 92/257 (35%), Gaps = 10/257 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIA 75
F + +A+ ++ + LL++ P + + + V+ + A
Sbjct: 24 RRFDALEVPQVAASLTFTTLLALVPVLTVALYVLSAFPMYDRLAAAVLHFIDSNLVPQGA 83
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + + A L I A S + + + NR ++V +R ++ L+
Sbjct: 84 GAVRGYLATFQSN-AANLTAIGLAFLALTSLLLIRTIDHTFNRIWQVQNLRPLWMQFLV- 141
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
Y LL + + + A + + L + R A + L
Sbjct: 142 --YWLLLAFAPLAVGAGLAAWEILIK-----DNILSAQNPLSEALRTLAAAAGGTLALFL 194
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ +P L G T + + F YI TF++Y+ +Y A+I L++L
Sbjct: 195 LYRLVPNRHVPARHALTGAAATAVLLEMLRRGFAWYIGTFNSYTLIYGAFAAIPVFLLWL 254
Query: 256 YMLGVFFILGAELNASM 272
++ + GA +S+
Sbjct: 255 NLVWTLLLTGAVFTSSL 271
>gi|225024406|ref|ZP_03713598.1| hypothetical protein EIKCOROL_01281 [Eikenella corrodens ATCC
23834]
gi|224942787|gb|EEG23996.1| hypothetical protein EIKCOROL_01281 [Eikenella corrodens ATCC
23834]
Length = 411
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 9/259 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
F E + ++S ++ + LL++ P + F +V
Sbjct: 25 LYARFYEVNIPQVSSSLTFTTLLALVPLFTVVVVVVSAFPVFADFSAQFHRLVSEIMMPA 84
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
++D I Q ++ L I S V + + N+ +RV RS
Sbjct: 85 GVAAVSDYIFQFRDHASR-LTAIGIAMMIITSLMLVHTIERTFNQIWRVKRPRSIVTR-- 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
VL+ L + + V + + L+ + + A + L
Sbjct: 142 -----VLVYWALLSLGPLLVGVGMSLWGVVWRRTLFYLHYPLLASLLQFTVALTATWSML 196
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +PA + L +S + F Y+ F++Y +Y A++ L+
Sbjct: 197 CLLYKLVPARYVPLRHALISAALAAVSIELLRRGFGLYVANFNSYQLVYGTFAAVPMFLL 256
Query: 254 FLYMLGVFFILGAELNASM 272
+L + + + GA L AS+
Sbjct: 257 WLNLNWIVILSGALLAASL 275
>gi|91776668|ref|YP_546424.1| cyclic nucleotide-binding domain-containing protein
[Methylobacillus flagellatus KT]
gi|91710655|gb|ABE50583.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Methylobacillus
flagellatus KT]
Length = 428
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 101/265 (38%), Gaps = 9/265 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + F ++ + + F +G+ M++ +S A+ ++ P IV L L T
Sbjct: 26 RHRYSTPFFVLRETLNSFQVHNGFGMSASLSFYAMFALIPLIVLMFFLLSHLVVSSNSAT 85
Query: 62 V-IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + ++ ++ I E+ + +A + + ALR +
Sbjct: 86 VKLAIIVSNLVPNLSNRIMVEVYN-ASQHKAAWGVFGFIAMFWLAVPLAGALRSAFYTIA 144
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E S+ ++ +L + +++M F+F + L + V + I +
Sbjct: 145 GVQEKPSFMRRQIKD----ILGVLGILLMFFLFTILGLGIEKVMHVLEPHTSYSRYINSA 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ + + + + + I+ G T + W+ F+ ++ Y
Sbjct: 201 ---ISIALTTLLIAMFYRVYFPLRLQHSHIVIGAAITALLWLAMRPAFSLFLSINPAYGA 257
Query: 241 MYAGLASIMTCLVFLYMLGVFFILG 265
++ G+ ++ + +LY V F+LG
Sbjct: 258 VFGGMKNLFISIAWLYYTFVVFMLG 282
>gi|237653286|ref|YP_002889600.1| ribonuclease BN [Thauera sp. MZ1T]
gi|237624533|gb|ACR01223.1| ribonuclease BN [Thauera sp. MZ1T]
Length = 304
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 111/276 (40%), Gaps = 12/276 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGA 69
+I ++ ++E + A+ ++ + SV P ++ +L G LG + + + A
Sbjct: 15 VIRTTVKLWLEAQVFVHAAALAFFTVFSVAPVVIIAVSLVGLVLGESAAQGRIAEQLEVA 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEMRS- 127
+A I ++ + L TI+ + A F ++ ++ SLN + V +
Sbjct: 75 IGPEVAAAIQTAVVNSRIQHSGLLPTIAGVGAIVFGATTVFTQMQESLNAIWGVAPRPTR 134
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
TRL+S VL L++ + + + +A+ + + P + +I
Sbjct: 135 SGVFIHLKTRLLSLAVVLGIGFVLLVSLSLSIFVRALVAFAQDWLPVP---VGLIIGLDW 191
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + + + LP +LPG T + + +G L Y+ T +T ++ Y
Sbjct: 192 VIALLVVTLLFATIFRVLPEVVLGWRDVLPGAFVTALLFALGRALIAIYLSTTAT-ASTY 250
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
S++ L+++ + + GA + + R
Sbjct: 251 GAAGSLVLLLLWVNYSSLILLFGAAFTRAYLEARGR 286
>gi|241895345|ref|ZP_04782641.1| conserved hypothetical protein [Weissella paramesenteroides ATCC
33313]
gi|241871319|gb|EER75070.1| conserved hypothetical protein [Weissella paramesenteroides ATCC
33313]
Length = 320
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 8/250 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F + + I+ ALLS+ P ++ +A G + +I ++ P I +
Sbjct: 30 FKRGNLKMVGPTITYYALLSMVPILMSVGAVASLAGMN--ASELITLLSEQLPSNIMSIL 87
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
I VL G+ + S L + +S+ + +R S N Y V E S +TR+ SF +
Sbjct: 88 APIIQSVL-KGGVGILSFSILTTIWAASSVLAIIRKSFNAVYDVPERVSGLLTRVFSFLW 146
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+++ ++ V++ V +P +A + L I R T+ L++ + +
Sbjct: 147 LMVILISAVVVMLVSAILPAIIAAIPGI-----GWLEFITKQRWIITLAGLWVMMCVFNA 201
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
LPA + + ++ G I ++ F Y Y L S++ +V+L ++
Sbjct: 202 ALPAKRIALKPLIIGSGVEVILMIILNYSFGWYAKFTVKNVGFYQSLGSLLVLIVYLNLI 261
Query: 259 GVFFILGAEL 268
G ++G L
Sbjct: 262 GTIMVIGQIL 271
>gi|326692407|ref|ZP_08229412.1| integral membrane protein [Leuconostoc argentinum KCTC 3773]
Length = 289
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 9/252 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F + + ALL+VFP ++ A + Q T++ + P+ +A +
Sbjct: 25 FSRAQINYVGPTFAYYALLTVFPMLMSIAMIVSIANVSQ--ATLMTTLNSMLPQDVAAVV 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
V+A L + S + S + R+S NR E S +TR SF +
Sbjct: 83 RPIFKSVMASKQVSLLSFSVPFTLWTVSRVIAVFRLSFNRISDTDERISTMLTRFWSFLW 142
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+L+ ++ V + L V P+ L I+ R L L++ L+ ++
Sbjct: 143 LLV----ILAGFGVLLIGGNILTLVVNRLPSNQLPLFILHQTRWLIW-LGLWLALVMLNY 197
Query: 199 FLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
FLPA ++ ++ G + + V FT Y+ Y ++SI+ L++L
Sbjct: 198 FLPAKSGRAPFKMVMLGSLIELGLLEILNVAFTWYVRFGLKRYDFYQSMSSIIVLLIWLN 257
Query: 257 MLGVFFILGAEL 268
++ + G L
Sbjct: 258 LIATILVTGYVL 269
>gi|153006923|ref|YP_001381248.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
gi|152030496|gb|ABS28264.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
Length = 487
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 114/288 (39%), Gaps = 11/288 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-LAGFLGAHQFVP 60
+ V + Y + F++ A+ ++ ++LSV PF+ F L GF F+
Sbjct: 33 KAALFRVSRLGYSTVRGFLDNRLTVRAAALTYYSILSVVPFLAFAFAVLKGFGAYRTFIG 92
Query: 61 TVID--VVFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLN 117
++ + T+ IL+ + L + + Y S + V ++ ++LN
Sbjct: 93 EIVRPYLADTFGANPALHQATERILEFVERTDVSRLGALGLVVLVYTSVSLVSSIEVALN 152
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ R + R I+ LL + +++ + ++ + V F L I
Sbjct: 153 DVFGAKTTRPFL--RQITDYVTLLVTTPILVFAAATISTAAQSSSVIVFLRERLGLGPAI 210
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + + L ++ LP + + S L G + W VL + +
Sbjct: 211 DFALGFTPVAVVCLALFAMYTILPNVRVRPFSALLGAAVAALGWQGALVLHVQLQMGVAK 270
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL-----NASMIIYYWRKK 280
Y+ +Y+ L+++ LV+ Y+ + ++GAE+ N ++ R K
Sbjct: 271 YNALYSVLSALPIFLVWSYVSWLIVLVGAEIAASHQNEQIVRQRLRGK 318
>gi|60682519|ref|YP_212663.1| putative ribonuclease [Bacteroides fragilis NCTC 9343]
gi|60493953|emb|CAH08744.1| putative ribonuclease [Bacteroides fragilis NCTC 9343]
Length = 311
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 107/274 (39%), Gaps = 12/274 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++F II D + F+++ +++ ++ + L S+ PF+ + F
Sbjct: 10 RLSLSLLFKIIKDTVWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTVGVFFHMD-LANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALA-AAYFSSNGVEALRISLNRAY 120
+ + + + + I + +L + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEVTEALRSIIENAENTDSSRSAAFVSLGISILGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLL 174
+ + + R++SF +L+ + L+I + + L+ ++ K+ +L+
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLITFTITNIIGELSQKFIFKYPEVADSLV 188
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ I M I + LP AK K + G + T I ++G + YI
Sbjct: 189 KVVG---IIINMSVTTIIFTLIFKILPDAKIKSKDVCIGAVVTTILLLIGQWGISFYIG- 244
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ T+Y A ++ + ++Y + GAE
Sbjct: 245 IANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEF 278
>gi|329960789|ref|ZP_08299095.1| YihY family protein [Bacteroides fluxus YIT 12057]
gi|328532390|gb|EGF59191.1| YihY family protein [Bacteroides fluxus YIT 12057]
Length = 439
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 6/262 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ IY I F ++ AS ++ S LL++ P + +A G + I F
Sbjct: 34 IIKTIYLCINRFTKDRIVNKASALTYSTLLAIVPILAIVFAIARGFGFDNLMENQIISGF 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G P I + L+ G+F + + + N + + I+ NR ++V + R
Sbjct: 94 GG-PTETTTVILQFVNSYLSQTKSGIFIGVGLVMLLWSVLNLINNMEITFNRIWQVKKAR 152
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S Y F +LL + LV+ + + + L V F L + + +A
Sbjct: 153 SMYRKITDYFSMLLLIPILLVLSGGISIFMSTMLKNVED-FTLLAPIGKFLVRLIPFALT 211
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+F G +++F+P K K+ L I + L+ + S Y+ +Y A
Sbjct: 212 WFMFTG---LYVFMPNTKVKLKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYGSFA 268
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ L++L + + GAEL
Sbjct: 269 ALPMFLLWLQISWTICLFGAEL 290
>gi|261867366|ref|YP_003255288.1| ribonuclease BN [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412698|gb|ACX82069.1| tRNA-processing ribonuclease BN (RNase BN) [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 276
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 101/267 (37%), Gaps = 10/267 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
+ F + A +++ S +L++ P I+ ++ V + + +F +
Sbjct: 11 FWQRFNQNKLTQAAGYLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFTNFAPS 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + + +K + + ++ + + ++ +LN + R + +
Sbjct: 71 AGDVVGQYIDEFVNN-SKQMSAVGIISLIVVALMLINSIDRTLNGIWHDTSTRPIFTSFA 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + + L + + + Y L + L+ +
Sbjct: 130 IYWLILTLGPLLVGTSIAASSYVKTMFEYSAASSFGL--------KLLSFVPFLSTWFIF 181
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P K I G + + + +G F YIVTF +Y +Y +A++ L+
Sbjct: 182 TVIYMVVPNKKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQLIYGAMATLPIMLL 241
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++ + F +LGA+L A + +K+
Sbjct: 242 WIQLSWTFVLLGAQLAAVLAEVQSKKQ 268
>gi|265766043|ref|ZP_06094084.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253711|gb|EEZ25176.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 311
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 107/274 (39%), Gaps = 12/274 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++F II D + F+++ +++ ++ + L S+ PF+ + F
Sbjct: 10 RLSLSLLFKIIKDTVWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTVGVFFHMD-LANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALA-AAYFSSNGVEALRISLNRAY 120
+ + + + + I + +L + + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEVTEALRSIIENAENTDSSRSAAFVSLGISIFGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLL 174
+ + + R++SF +L+ + L+I + + L+ ++ K+ +L+
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLITFTITNIIGELSQKFIFKYPEVADSLV 188
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ I M I + LP AK K + G + T ++G + YI
Sbjct: 189 KVVG---IIINMSVTTIIFTLIFKILPDAKIKSKDVCIGAVVTTTLLLIGQWGISFYIG- 244
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ T+Y A ++ + ++Y + GAE
Sbjct: 245 IANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEF 278
>gi|294634258|ref|ZP_06712800.1| YihY family protein [Edwardsiella tarda ATCC 23685]
gi|291092298|gb|EFE24859.1| YihY family protein [Edwardsiella tarda ATCC 23685]
Length = 292
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
E+ +A ++ +LLS+ P + +L V + +F +
Sbjct: 19 LWRRVDEDRMTMVAGSLAYVSLLSLVPLVTVVFSLFTAFPMFASVSDQLKHFIFTNFVPA 78
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + Q +A +K + + + + + ++ +LN +R R+ +
Sbjct: 79 AGDVVQSYLEQFVANSSK-MTALGIIGLIVTALLLISSVDGALNHIWRSERKRAIVYSFA 137
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + +L LV S L+L ++ + ++ +L +
Sbjct: 138 V-YWMILTLGPLLVGASMGISTYLLSLRWLAD-----SRVYSLVDQLLRLFPLLLSCVSF 191
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + + L G + + +G F YI F +Y +Y LA I V
Sbjct: 192 WLLYCIVPTQRVPLRDALIGALVAGGLFELGKKAFALYITAFPSYQLIYGVLAVIPMLFV 251
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ + ++
Sbjct: 252 WVYWSWCIVLLGAEITVAIGDFRTHRQ 278
>gi|261493054|ref|ZP_05989594.1| ribonuclease BN [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496342|ref|ZP_05992737.1| ribonuclease BN [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261307986|gb|EEY09294.1| ribonuclease BN [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311274|gb|EEY12437.1| ribonuclease BN [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 281
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 109/276 (39%), Gaps = 8/276 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ I + + E + A +++ S +L++ PFIV ++ F +
Sbjct: 2 LNRLWRFIKLFAKRYNENNIAISAGYLTYSTMLAIVPFIVVLFSIFTFFPIFHEANEQLK 61
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ + ++ +++ I ++ AK + +S + + ++++ +LN +
Sbjct: 62 AFIYDNFAPSASEMVSEYIELFVSN-AKQMGLVSFIGLFVVTIMLIKSIDEALNTIWHDN 120
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + L+ F +L + + + + +LG LL +
Sbjct: 121 RQRPMWFSFLLYFLILLFGPLLAGASIAISTYVMSLSIFNGSGALSLGQHLLEL------ 174
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L +++ V+ F+P K K + G + I + +G F YI F +Y +Y
Sbjct: 175 TPFLLIWLLFTLVYKFIPIRKVKFIHAAIGALMAAIFFTLGKKAFIWYITAFPSYQAIYG 234
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA + L+++ + +LG + A + K
Sbjct: 235 ALAVLPIMLLWIQLSWQVVLLGGQFAAVLDEMETDK 270
>gi|145300965|ref|YP_001143806.1| ribonuclease BN [Aeromonas salmonicida subsp. salmonicida A449]
gi|288559238|sp|A4ST36|Y4118_AERS4 RecName: Full=UPF0761 membrane protein ASA_4118
gi|142853737|gb|ABO92058.1| ribonuclease BN [Aeromonas salmonicida subsp. salmonicida A449]
Length = 290
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/264 (16%), Positives = 96/264 (36%), Gaps = 8/264 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
F + A +++ LLS+ P I + Q + ++ V+ +
Sbjct: 27 VWSRFQHDRLTVTAGYLAYVTLLSLVPMIAVVFGMMSAFPVFQTLKQAMEQFVYHNFVPT 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + I +A A + A + + A+ +LN +R + R
Sbjct: 87 AGEMLKEYIDGFVAN-ATNTTAVGIGALIVVALMLISAIDKNLNYIWRSTQGRP------ 139
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ + + + + + +I ++ +L I + L +
Sbjct: 140 LAQAFAMYWMILTLGPVLIGGSIAISSYIFSLRLFGAESLFGIGYLLLRSLPFLFSVLTF 199
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ V+ +P K +++ G + + + F YI F +Y +Y LA+I V
Sbjct: 200 LLVYTVVPNCKVRLVHAFIGALVAATLFELAKRGFAIYITNFPSYQAIYGALATIPVLFV 259
Query: 254 FLYMLGVFFILGAELNASMIIYYW 277
++Y+ + +LGAE A + Y
Sbjct: 260 WVYLSWLVVLLGAETTACLGEYEK 283
>gi|172036200|ref|YP_001802701.1| putative ribonuclease BN [Cyanothece sp. ATCC 51142]
gi|171697654|gb|ACB50635.1| putative ribonuclease BN [Cyanothece sp. ATCC 51142]
Length = 304
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 105/278 (37%), Gaps = 18/278 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + + + E+D M + +S A+ S+FP ++ ++ G + ++
Sbjct: 14 IVQLFTRTVVKWQEDDCIEMGAALSYYAIFSLFPILLVILSITGLILGPDTNAYTQILVF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--- 122
A P + + ++Q L + G I +S AL ++++ ++V
Sbjct: 74 AKRALPIEAYRIVESTLVQ-LNESSLGAGIIGFSILFVTASRIFRALGRAVDKIWKVHHR 132
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL-----------ALAYVRKFFPALG 171
R ++ +I+F + + LV+ S + + L + V +
Sbjct: 133 QSNRGGWVWTIINFIQNQIIAFLLVLSSTALLLVSLLSNIALKVFLKIIKNVEQVITWFR 192
Query: 172 NLLLIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+WN + T L ++ ++ LPA K K I G + + + + L ++
Sbjct: 193 VDEAFLWNSLQLGVTFFLLTSVVMLLYKTLPATKVKWSDIWIGALISVSLFSLLQSLVSN 252
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ Y + M L+++++ F LG E
Sbjct: 253 GVIRIGEQFRAYGIVGGFMVLLLWIFLTCQIFFLGCEF 290
>gi|330719410|ref|ZP_08314010.1| ribonuclease BN-like family protein [Leuconostoc fallax KCTC 3537]
Length = 283
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 108/263 (41%), Gaps = 7/263 (2%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
+ + LL+ FP ++ A + F V +ID + P I+K +
Sbjct: 26 QRSQISYVGPTFAYYVLLTAFPILIGVAMMLSFTNIDNTV--LIDNLRNILPPNISKILL 83
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ +L + LF+I+ + A + S + R + N V E S +TR SF ++
Sbjct: 84 PILTSILNNRSVSLFSITIILAIWSISRVIAIFRKAFNAIAGVEEKISSLLTRAFSFIWL 143
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
L+ ++++ VF+ + V + FPA I+ + ++ + + ++ L
Sbjct: 144 LV----IILLFGVFLIVGNVSVVVLQNFPAWSFADTILAQSQWIVSLGSWLMLVLLNFLL 199
Query: 200 LPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
A++K+ +L G + FT Y Y ++SI+ L++L ++
Sbjct: 200 PTKEARTKLRYVLVGSFIEVGLLTLLNKGFTFYAKFALGRYDFYQSISSIIVVLIWLNLI 259
Query: 259 GVFFILGAELNASMIIYYWRKKP 281
+ G + + ++WR+K
Sbjct: 260 ASILVAGYVIIHWLSEFHWREKD 282
>gi|282890477|ref|ZP_06299000.1| hypothetical protein pah_c022o045 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499474|gb|EFB41770.1| hypothetical protein pah_c022o045 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 425
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 107/271 (39%), Gaps = 2/271 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + I A+ F+E D +A ++ ++ LLS+ P + +A G + +
Sbjct: 14 KLLKKIVRISKAAVWGFIEHDCYAKSASLAFYTLLSIVPVLAVAFGIAKGFGFQDALESS 73
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I F E+ + + + + + L + + + ++ SLN + +
Sbjct: 74 ILEKFQENKEITRQILEFANNTLHHAESSVIAGFGVLILFWSVFSLLGSIETSLNVIWHI 133
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RS ++L+ + L I S V + + + + ++
Sbjct: 134 KIARSIGKKITHYLTLIILSPLLLAIGSSAIVFLAAQIRIATQAAIGTAVIHPVMVVIVN 193
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ +++ +I ++L +P + ++ + I + + ++ H + S+Y +Y
Sbjct: 194 FFSLVVSWILFSAIYLLIPNTQVQLRYGVFAGIIAGTFYQIVQWIYIHIQIYLSSYGAVY 253
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL--NAS 271
LA+I ++L + + ++GAEL NA
Sbjct: 254 GSLAAIPLFFIWLQISWLIVLMGAELAFNAE 284
>gi|312170599|emb|CBX78862.1| tRNA processing exoribonuclease BN [Erwinia amylovora ATCC
BAA-2158]
Length = 290
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 107/278 (38%), Gaps = 8/278 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ I + E+ +A H++ +LLS+ P I L V +
Sbjct: 10 RLRAFWTWIKLLWQRIDEDAMTVLAGHLAYVSLLSLVPLIAVVFALFTAFPMFSDVSVQL 69
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ F + + + Q +A ++ + + + + ++ +LN +R
Sbjct: 70 KNFAFHNLVPAAGTTVQNYLEQFVANVSR-MTAVGVGGLVVTALLLMYSIDSALNTIWRS 128
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R + ++ +++L L+ + + ++ + + +G L ++I
Sbjct: 129 KVKRPLVYS--LAVYWMILTLGPLLAGASLAISS----YLLSLHWATIGGLSVLIDMVLR 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + ++ +P A L G I I + +G FT YI TF +Y +Y
Sbjct: 183 IFPLLLSCLSFWLLYSLVPTAPVAGHDALVGAIVGGILFELGKKGFTLYIPTFPSYQLIY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA + +++Y +LGAE+ A++ Y K+
Sbjct: 243 GVLAVVPILFLWVYWTWCIVLLGAEITATLADYRRLKR 280
>gi|188993400|ref|YP_001905410.1| Putative ribonuclease BN [Xanthomonas campestris pv. campestris
str. B100]
gi|167735160|emb|CAP53372.1| Putative ribonuclease BN [Xanthomonas campestris pv. campestris]
Length = 315
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 99/274 (36%), Gaps = 19/274 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F+E D A+ +S ALLS+ P +V L L ++ +
Sbjct: 24 LFNRFLEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQIAQLAGGSA 82
Query: 75 AKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMR-----S 127
A+ I P G S L ++ L+ +LN +R + R +
Sbjct: 83 AEVADTVIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGIMA 142
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ SFG +L L++ A+ + A + PA+G T+
Sbjct: 143 WLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG----------YVTTLA 192
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ F++ +LP G + T + + +G YI + S Y + +
Sbjct: 193 LYSLAFAFLYRYLPDRTVNWRQAFVGGVITSLLFALGRYAIGMYIAKAAPGSA-YGSMGT 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ LV++Y V F +GA L A + +
Sbjct: 252 LVILLVWMYYASVVFFIGALLTAVIDERVRSHRK 285
>gi|254417765|ref|ZP_05031489.1| Ribonuclease BN-like family [Brevundimonas sp. BAL3]
gi|196183942|gb|EDX78918.1| Ribonuclease BN-like family [Brevundimonas sp. BAL3]
Length = 321
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 88/266 (33%), Gaps = 8/266 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
A D +S ALL+VFP I + V + P
Sbjct: 26 RAFTRSWGRDVMLYTGGVSFFALLAVFPAIAILIGFYKLGLSINEVSAQAAALSDLLPRA 85
Query: 74 IAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
DEI ++ A+ + T + AY + G +AL LN + E ++
Sbjct: 86 AQTIFRDEIARLSNASARTISTQSAFALFVGAYAAHRGFKALLAGLNLIHDETEPHGFFK 145
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L++F + A ++S V + P + + L L
Sbjct: 146 FNLLAFFVAVFAFALFTVVSGAVVTARIL---AHTASPMTDQFDGGLLPLDAFLPALGLA 202
Query: 191 IGLIFVHLFLPAAKSK--IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+GL ++ + + +S + + G + + V+ + L Y+ + Y + ++
Sbjct: 203 VGLTLLYRYAMSHRSPVAWLPAITGGLVATLMSVISSWLCAIYVEQIAPLGATYGSVGAV 262
Query: 249 MTCLVFLYMLGVFFILGAELNASMII 274
+ L++L G M I
Sbjct: 263 VVLLIWLSWNVNAIFYGGAFATEMEI 288
>gi|85060204|ref|YP_455906.1| ribonuclease BN [Sodalis glossinidius str. 'morsitans']
gi|84780724|dbj|BAE75501.1| ribonuclease BN [Sodalis glossinidius str. 'morsitans']
Length = 304
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 98/277 (35%), Gaps = 8/277 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R + V I + +D +A H++ +LLS+ P + L V
Sbjct: 4 LRLHKLPVLHFIQHLGKRVYRDDITVLAGHLAYVSLLSLVPLVTVIFALFAAFPVFSDVS 63
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + I + Q + ++ + + + + ++ LN
Sbjct: 64 VELRHFIFTNFMPATGDVIQLYLEQFILNSSR-MTAVGTCGLIVTALLLIYSVDTVLNSI 122
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R R + + + VL LV S V + +L ++ + I+
Sbjct: 123 WRSKNKRPIIFSFAV-YWMVLTLGPLLVGASMVLSSYLFSLTWLN-----VSGAKGIVTL 176
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L ++ +P + L G + + +G F Y+ F +Y
Sbjct: 177 LLRIFPLLLSCASFWLLYSLVPTVRVPARDALVGALVAGALFELGKKGFGLYVTLFPSYQ 236
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y LA I +++Y +LGAE+ AS+ +
Sbjct: 237 LIYGVLAVIPILFLWVYWSWCIVLLGAEITASLSEHR 273
>gi|188574977|ref|YP_001911906.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188519429|gb|ACD57374.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 320
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/283 (20%), Positives = 103/283 (36%), Gaps = 19/283 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + F+E D A+ +S ALLS+ P +V L L ++
Sbjct: 15 RLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQ 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVV 123
V A+ I P G S L ++ L+ +LN +R
Sbjct: 74 VAQLAGGSAAEVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLIFRTD 133
Query: 124 EMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ R +W R+ SFG +L L++ A+ + A + PA+G
Sbjct: 134 KERLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG------- 186
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
T+ + F++ +LP G + T + + +G YI T +
Sbjct: 187 ---YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGRYAIGVYIATAAPG 243
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S Y + +++ LV++Y V F +GA + A + +
Sbjct: 244 SA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHRK 285
>gi|218782337|ref|YP_002433655.1| ribonuclease BN [Desulfatibacillum alkenivorans AK-01]
gi|218763721|gb|ACL06187.1| ribonuclease BN [Desulfatibacillum alkenivorans AK-01]
Length = 450
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 101/255 (39%), Gaps = 2/255 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A+ F+ ++ W AS ++ +LL + P + +A +G + ++ FGA E++
Sbjct: 45 AVNDFLRDNCWMRASALTYYSLLGIVPLLAMIMGIARGMGFEARIEELLLHEFGA-QELV 103
Query: 75 AKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + +L+ G+ + L + + I+ N+ + + RS +
Sbjct: 104 LTKVLEFAKAMLSNTRGGVVNGLWMLLLLWTVIRLFGNIEIAFNQIWGFAKGRSQARKVI 163
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
LL V + S V I + ++ +I + + +++
Sbjct: 164 DYLAVALLMPVLWLPASSAQVLIASQIEAYTQWAFLQNVGDIIQFTLLFFLPFAMIWVLF 223
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++F+P S + I ++ + + + V + + +Y A++ L+
Sbjct: 224 SCLYIFMPNGSVSWTSGIVAGIVAGSAFQLFQRFYIEFQVGVARNNAIYGSFAALPLFLI 283
Query: 254 FLYMLGVFFILGAEL 268
+LYM V + GAE+
Sbjct: 284 WLYMSWVIVLFGAEI 298
>gi|116694816|ref|YP_729027.1| ribonuclease BN [Ralstonia eutropha H16]
gi|113529315|emb|CAJ95662.1| Ribonuclease BN [Ralstonia eutropha H16]
Length = 303
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 102/283 (36%), Gaps = 4/283 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + + F G +A ++ ALLS+ P ++ + + +
Sbjct: 12 RDLLRHPGRFAWHTLRQFRANQGLLLAGAVAYYALLSIVPLLILMIIALSHVIEPDLLLS 71
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + E+ L + + + +FSS L +++ +
Sbjct: 72 TLARYLEWVVPGQSRALITELAAFLRN-RGTIGWVLLVTMLFFSSLAFTVLENAMSVIFE 130
Query: 122 VV---EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
R + ++ L+ + Y+ + SV L++++ V + + +L +
Sbjct: 131 HRVAIRRRHFLVSALLPYCYIAVLSVGLLLVTVVSGGLLAIGERHVEVLGRDWSLDRLST 190
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + L +++ +P + + L G + + W + + Y T S
Sbjct: 191 GLLYLLGFIGEVLMLTSIYMVMPVGRLSLRHALSGALVAAVLWEISRHVLAWYFTTLSQV 250
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S +Y L + + L+ L + + GA++ A W +P
Sbjct: 251 SRVYGSLTTAIVVLLSLEIAATLLLFGAQVIAEFERGGWEGRP 293
>gi|303257859|ref|ZP_07343868.1| YihY family protein [Burkholderiales bacterium 1_1_47]
gi|331000482|ref|ZP_08324157.1| tRNA-processing ribonuclease BN family protein [Parasutterella
excrementihominis YIT 11859]
gi|302859202|gb|EFL82284.1| YihY family protein [Burkholderiales bacterium 1_1_47]
gi|329571814|gb|EGG53494.1| tRNA-processing ribonuclease BN family protein [Parasutterella
excrementihominis YIT 11859]
Length = 408
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+++ +E + +AS ++L+ LLS+ P +
Sbjct: 14 NLERMWNFGMFVMERIDKASLKQVASSLTLTTLLSIVPALAVIMAAFSAFPLFAPYREAF 73
Query: 64 D--VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + PE + I I Q A A GL + + + + +LN Y
Sbjct: 74 EQFIFSTLLPEQYSDQILGYIKQ-FATQAAGLTAFGLIGLMVSALLCIATIDSALNSTYE 132
Query: 122 VVEMRSWYITRLISFGYVLLA--SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
V+++RS + L+ + + L ++ + + + ++ ++ + L + +I+
Sbjct: 133 VLKLRSLWQRVLMYWALLTLGPVAIGISLAASSYLTGMAMSGHLSVYAQWLIPIGQLIFQ 192
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I L ++ ++P + L G I + + V F Y++ +Y+
Sbjct: 193 S----------IILAALYKYVPNCRVLWRDALVGGILIALVFTVFRWGFGIYVMR-GSYT 241
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T+Y A+I L ++Y+ +F + GA + A++ + ++
Sbjct: 242 TIYGAFAAIPVMLTWMYINWMFVLAGAAITATLPMLRAKR 281
>gi|33594368|ref|NP_882012.1| serum resistance protein [Bordetella pertussis Tohama I]
gi|33599949|ref|NP_887509.1| serum resistance protein [Bordetella bronchiseptica RB50]
gi|562027|gb|AAA51647.1| BrkB [Bordetella pertussis]
gi|33564443|emb|CAE43754.1| serum resistance protein [Bordetella pertussis Tohama I]
gi|33567546|emb|CAE31459.1| serum resistance protein [Bordetella bronchiseptica RB50]
gi|332383779|gb|AEE68626.1| serum resistance protein [Bordetella pertussis CS]
Length = 296
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 94/263 (35%), Gaps = 6/263 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGA 69
++ D+ + + + +SL + S+ P ++ +AG F G + V
Sbjct: 18 LLTDSAREWSRHRASSKGAALSLYMVFSLAPMLILVIAVAGAFFGEEAVRSELFSQVRDL 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVVEMRSW 128
E A+ I + + L + ++ + ++ L+ SL+ + V E +S
Sbjct: 78 TGERGAEVIQTVLASAHESGSGWLAALLSICVLVFSATTAFAELKASLDELWDVKEDKSG 137
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY---AT 185
+ S + L + + + + AL + ++ L + +
Sbjct: 138 LQGLVRSRMLSFGLVLVLALFLLLSLTLNAALGAAKGYYGDLWSTSAFAMAADWLSNLFS 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ V+ LP+ + + ++PG I T ++ G Y+ + Y
Sbjct: 198 FAVVTALFAVVYKLLPSKRIPWLDVIPGAIVTAALFLAGKWGIGLYLGR-GAAVSAYGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
S++ L+++Y F GA
Sbjct: 257 GSLIALLLWIYYSAQIFFFGAVF 279
>gi|296111656|ref|YP_003622038.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
gi|295833188|gb|ADG41069.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
Length = 282
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 94/239 (39%), Gaps = 9/239 (3%)
Query: 32 SLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAK 91
+ LL+VFP ++ A + Q ++ + P I + +T + VL+ +
Sbjct: 38 AYYVLLTVFPMLISVAIIISITNVSQT--DLMTAIQSVLPSNIEQIVTPILRSVLSSKST 95
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
+ S L + S + R+S NR V E S +TR+ SF ++L+ ++ +
Sbjct: 96 SWLSFSILLTLWTVSRVIAVFRLSFNRIAGVEERISNLLTRVWSFIWLLI----IIAVFG 151
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA--KSKIMS 209
V + L V + P + L +++ L ++ LP ++
Sbjct: 152 VLMVGSNILTIVIQQLPDNHWTFFLTHQSHWLIW-LGMWLALTLMNYLLPTKEGRAPFRF 210
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ G + + V FT Y Y ++SI+ L++L ++ ++G L
Sbjct: 211 VAIGSLIEVGMLNLLNVGFTWYTKFGLKQYDFYQSMSSIIVVLIWLNLIATVLVIGYVL 269
>gi|325918192|ref|ZP_08180341.1| putative membrane protein [Xanthomonas vesicatoria ATCC 35937]
gi|325535599|gb|EGD07446.1| putative membrane protein [Xanthomonas vesicatoria ATCC 35937]
Length = 322
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/283 (20%), Positives = 103/283 (36%), Gaps = 19/283 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + F+E D A+ +S ALLS+ P +V L L ++
Sbjct: 19 RLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQDALVQQ 77
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVV 123
V A+ I P G S L ++ L+ +LN +R
Sbjct: 78 VAQLAGGSAAEVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLIFRTD 137
Query: 124 EMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ R +W R+ SFG +L L++ A+ + A + PA+G
Sbjct: 138 KQRLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG------- 190
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
T+ + F++ +LP G + T + + +G YI T +
Sbjct: 191 ---YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFALGRYAIGVYIATAAPG 247
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S Y + +++ LV++Y V F +GA + A + +
Sbjct: 248 SA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHRK 289
>gi|156972915|ref|YP_001443822.1| ribonuclease BN [Vibrio harveyi ATCC BAA-1116]
gi|166199588|sp|A7MTU7|Y593_VIBHB RecName: Full=UPF0761 membrane protein VIBHAR_00593
gi|156524509|gb|ABU69595.1| hypothetical protein VIBHAR_00593 [Vibrio harveyi ATCC BAA-1116]
Length = 314
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 93/259 (35%), Gaps = 8/259 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ + A +++ LLS+ P + ++ + V + + +
Sbjct: 26 LLKRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFENVGETLQGYIIDNFVPA 85
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + ++ + + + + + +LN +RV + R +
Sbjct: 86 SGDAVRTALQEFVSN-TGKMTAVGGAFLFVAALMLISNIDKNLNYIWRVKDKRRPVFSFS 144
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S + +L + L + +L F
Sbjct: 145 M-YWMVLTLGPILVGASIAVTSYVTSLKLIEN-----ETLTGAYNLFLRWLPLLLSFFAF 198
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ ++ +P K + G + + + F YI F +Y +Y LA+I V
Sbjct: 199 MGLYFLVPNKKVYLSHGAIGAAIAAVLFELSKKGFAFYITQFPSYQLIYGALAAIPILFV 258
Query: 254 FLYMLGVFFILGAELNASM 272
++Y+ + ++GAE+ A++
Sbjct: 259 WVYLCWLIVLIGAEVTAAL 277
>gi|94264035|ref|ZP_01287835.1| Ribonuclease BN [delta proteobacterium MLMS-1]
gi|94266379|ref|ZP_01290078.1| Ribonuclease BN [delta proteobacterium MLMS-1]
gi|93453031|gb|EAT03519.1| Ribonuclease BN [delta proteobacterium MLMS-1]
gi|93455546|gb|EAT05733.1| Ribonuclease BN [delta proteobacterium MLMS-1]
Length = 484
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/308 (14%), Positives = 99/308 (32%), Gaps = 41/308 (13%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ + F + AS ++ + +LS+ P + G + LGA +
Sbjct: 44 LLRVLQIFVREFNRDRIPLRASALTFTIILSLVPTLALGTAVLKGLGADDQMRQAAHRFI 103
Query: 68 GAW-----------------------------------PEVIAKPITDEILQVLA----V 88
P I + + Q+
Sbjct: 104 EQMEATGALLDEHLPQRQEAAPEEGPAPPAAAPDETEDPADITAHLGQAVDQIFDYVDRT 163
Query: 89 PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
L + + ++ S+N + R + R + L+ + L +
Sbjct: 164 DFATLGAFGIIGLVVAVVVVLGSIERSMNAIWHTTLSRP--MGRRVMDYLALMILLPLAV 221
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
+ L +R + I + L + ++ FLP K K+
Sbjct: 222 NLTLATEATLKSENLRDRLQLPLPIGGIQEFILGLMPLALLTLTFTILYRFLPNTKVKLT 281
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
L G F ++W++ L+ + + Y+ +Y A++ LV+L + + F+ GAE+
Sbjct: 282 PALIGGFFGAVAWLLFQALYLNLQFGVARYNAIYGSFATLPLFLVWLQLCWIVFLSGAEM 341
Query: 269 NASMIIYY 276
+ ++ +
Sbjct: 342 SFAVQARH 349
>gi|312890004|ref|ZP_07749548.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
gi|311297536|gb|EFQ74661.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
Length = 317
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
++ V+ + F+++ G +++ ++ + S+ P ++ +LA F G
Sbjct: 6 KKSLLSVWKVASATFNGFLDDKGLKLSASLAYYTVFSIAPLLILLISLASFFYGQDAIQG 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRA 119
V V A I I V G+ ++ + ++GV ++ SLN
Sbjct: 66 KVFSQVNAFVGNQAAAQIQSMIKSVSLSGKTGVAVVTGIITLILGASGVFLEIQESLNII 125
Query: 120 YRVVEM--RSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+RV R W RL+SF ++ L++ + I ++ +FP L+
Sbjct: 126 WRVKAKPKRGWVKMITNRLLSFSLIIGLGFLLIVSLIINGVIIALSDHLTHYFPNATLLV 185
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
L + N + T + + + FLP + G FT + +++G L YI T
Sbjct: 186 LNVIN--LGLTFIVISALFGIIFKFLPDVNISWKEVRMGAFFTALLFMLGKYLIGIYITT 243
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T ST A S++ LV++Y GAE + K
Sbjct: 244 TGTGSTYGAA-GSLIVILVWIYYTSAILYFGAEFTQVYAEFTGCK 287
>gi|152967016|ref|YP_001362800.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151361533|gb|ABS04536.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 361
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 102/282 (36%), Gaps = 16/282 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------AH 56
+ V ++ + V +A+ ALLS+ P + G+LG
Sbjct: 60 RVWRDVRALVAGTVGACVRFRVTGLAAEGGFFALLSLPPLVFGVVASLGYLGRWLGAEDV 119
Query: 57 QFVPTVIDVVFGAW--PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+ + A I+ I V L ++ L + + S +
Sbjct: 120 AAARGQLARITEAVFTSRAISDVILPTFDSVTTAGRADLTLLAFLVSVWSGSRALNVHVD 179
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
++ Y + R TRL+S L+A + V++ + + P L L L
Sbjct: 180 TIAIMYGLGGHRGIVRTRLLSLSTYLVALLVGVVVVPLVLVGPRLLQ------EWLPEHL 233
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF--THYI 232
++ ++ + ++ +S+ +PG + + W V + + + +
Sbjct: 234 RVLSQLYWPVVLVLSVSCVTTLYHLATPVRSRWWRDVPGALLALLGWFVVSAVLRWSLSL 293
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+++Y LA+ + LV+ Y L + ++GA LN+++
Sbjct: 294 SVAGPSTSIYGPLAAPIVVLVWFYFLAIAVLIGAALNSAVDR 335
>gi|289666290|ref|ZP_06487871.1| ribonuclease BN [Xanthomonas campestris pv. vasculorum NCPPB702]
gi|289670010|ref|ZP_06491085.1| ribonuclease BN [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 320
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 57/283 (20%), Positives = 103/283 (36%), Gaps = 19/283 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + F+E D A+ +S ALLS+ P +V L L ++
Sbjct: 15 RLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQ 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVV 123
V A+ I P G S L ++ L+ +LN +R
Sbjct: 74 VAQLAGGSAAEVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLIFRTD 133
Query: 124 EMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ R +W R+ SFG +L L++ A+ + A + PA+G
Sbjct: 134 KQRLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG------- 186
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
T+ + F++ +LP G + T + + +G YI T +
Sbjct: 187 ---YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFALGRYAIGVYIATAAPG 243
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S Y + +++ LV++Y V F +GA + A + +
Sbjct: 244 SA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHRK 285
>gi|78049549|ref|YP_365724.1| putative ribonuclease BN [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78037979|emb|CAJ25724.1| putative ribonuclease BN [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 347
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 103/283 (36%), Gaps = 19/283 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + F+E D A+ +S ALLS+ P +V L L ++
Sbjct: 42 RLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQ 100
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVV 123
+ A+ I P G S L ++ L+ +LN +R
Sbjct: 101 IGQLAGGSAAEVAQTIIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLIFRTD 160
Query: 124 EMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ R +W R+ SFG +L L++ A+ + A + PA+G
Sbjct: 161 KQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG------- 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
T+ + F++ +LP G + T + + +G YI T +
Sbjct: 214 ---YVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPG 270
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S Y + +++ LV++Y V F +GA + A + +
Sbjct: 271 SA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHRK 312
>gi|312139428|ref|YP_004006764.1| ribonuclease bn [Rhodococcus equi 103S]
gi|325672683|ref|ZP_08152379.1| ribonuclease BN [Rhodococcus equi ATCC 33707]
gi|311888767|emb|CBH48079.1| putative ribonuclease BN [Rhodococcus equi 103S]
gi|325556560|gb|EGD26226.1| ribonuclease BN [Rhodococcus equi ATCC 33707]
Length = 369
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/285 (14%), Positives = 100/285 (35%), Gaps = 13/285 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQ 57
F ++ ++ + ++ + LS+ P ++ G++G
Sbjct: 13 FKRCAQVVGRTASKAWDDSIFGKSATAAFWQTLSLPPLLLGLLGSLGYVGGWFGPNTVEI 72
Query: 58 FVPTVIDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+I + E + I + VL + ++ L + + S+ + S+
Sbjct: 73 IQSKIITFSHTVFSENVVDQIIQPTVGDVLGRGRPEIISVGFLLSLWAGSSAISTFVDSI 132
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
A+ + R R+ + + + V + P + + P + +
Sbjct: 133 VEAHGQQDARHPVWQRVFALLLYVGFLILAVFTLPLVALGPTI---IGRVLPESWHTVGT 189
Query: 177 --IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ A L L IGL ++ +L G + + ++ + + Y+
Sbjct: 190 EMVDAFYYPAVGLLLIIGLTTLYKVALPKSLPWHRLLGGALLAGVFFMAASTILRWYLSA 249
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y LA+ + L+F + LG +LGAE NA++ ++ +
Sbjct: 250 IAGTGYTYGALATPIAFLLFTFFLGFAVVLGAEFNATIQEFWPAR 294
>gi|226941891|ref|YP_002796965.1| hypothetical protein LHK_02978 [Laribacter hongkongensis HLHK9]
gi|288559232|sp|C1D515|Y2978_LARHH RecName: Full=UPF0761 membrane protein LHK_02978
gi|226716818|gb|ACO75956.1| ribonuclease BN, putative [Laribacter hongkongensis HLHK9]
Length = 422
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 94/259 (36%), Gaps = 8/259 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
++ +A+ ++ + LLS+ P I + + + +
Sbjct: 23 VWRRAMQNRCLQVAASLTFTTLLSLVPLITITLIVVAAFPVFEELSSQFKEFLLRNLVPD 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A I L+ A L + A+ S + + + + N ++V R L
Sbjct: 83 FAGRIISVYLKQFTDNAGRLTAVGLALLAFTSLSLMLTIDRTFNAIWQVQRPRKLLHNML 142
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL L+ + A L + + + P L ++ + ++ + L
Sbjct: 143 V-YWTVLTLGPLLLGVGISGSAWILNWSGLARTAPGLAGIIQNLG------SLTLATVML 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P L G T ++ V F Y+ TY +Y A+ L+
Sbjct: 196 TVLYGLVPNCYVPRWHALIGGALTALTLGVAQAGFGLYVEISRTYQFIYGAFATFPFLLI 255
Query: 254 FLYMLGVFFILGAELNASM 272
+L ++ + ++GAEL AS+
Sbjct: 256 WLQLMWLTVLIGAELTASL 274
>gi|307545141|ref|YP_003897620.1| tRNA-processing ribonuclease BN [Halomonas elongata DSM 2581]
gi|307217165|emb|CBV42435.1| K07058 [Halomonas elongata DSM 2581]
Length = 360
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 108/275 (39%), Gaps = 12/275 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVP 60
R++ + ++ DA++ ++E + ++ A ++ L S+ P ++ + G LG
Sbjct: 14 RDFVLFWWTVVRDAVKLWLERNAFSYAGSLAFYTLFSLAPTVIIAVTVIGLVLGEDAAQG 73
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRA 119
++ + G A+ + + + Q + + T+ L A ++ ++ SLN
Sbjct: 74 QIVAQLEGTMGASAAELVQNAVAQSRIQESGLMPTLLGLGALVVGATTVFGQMQFSLNTL 133
Query: 120 YRVVEMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V S + R +S VL L++ + V + L P +G
Sbjct: 134 WGVTARPSSNSLWIFIKNRTLSLTVVLSIGFILLVSLALGVMVKAMLKAADGLLPFVG-- 191
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ ++ + + LP + +L G + T + + VG + Y+
Sbjct: 192 -FLTNGAEFLVSLALVSALFATIFKVLPDVVLRWRDVLVGAVVTALLFAVGRTAISVYLA 250
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+T ++ Y S++ L+++Y + + GA
Sbjct: 251 YTAT-ASAYGAAGSVVVVLLWVYYSSLILLFGAAF 284
>gi|251793486|ref|YP_003008215.1| ribonuclease BN [Aggregatibacter aphrophilus NJ8700]
gi|288559226|sp|C6AQL9|Y1801_AGGAN RecName: Full=UPF0761 membrane protein NT05HA_1801
gi|247534882|gb|ACS98128.1| tRNA-processing ribonuclease BN (RNase BN) [Aggregatibacter
aphrophilus NJ8700]
Length = 278
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 103/266 (38%), Gaps = 10/266 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
+ F + A +++ S +L++ P I+ ++ V + + +F +
Sbjct: 11 FWQRFNQNKLTQAAGYLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFTNFAPS 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I + + +K + + ++ + + ++ +LN + R + +
Sbjct: 71 ASDVVGQYIDEFVNN-SKQMSAVGIISLIVVALMLINSIDRTLNSIWHDTSTRPIFTSFA 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + L + + A AYV+ F + + L+ +
Sbjct: 130 I-------YWLILTLGPLLVGTSIAASAYVKTMFENASGFSFGL-KLLSFVPFLSTWFIF 181
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P K I G + + + +G F YIVTF +Y +Y +A++ L+
Sbjct: 182 TVIYMVVPNKKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQLIYGAMATLPIMLL 241
Query: 254 FLYMLGVFFILGAELNASMIIYYWRK 279
++ + F +LGA+L A + K
Sbjct: 242 WIQLSWTFVLLGAQLAAVLAEVRSEK 267
>gi|323345450|ref|ZP_08085673.1| YihY family protein [Prevotella oralis ATCC 33269]
gi|323093564|gb|EFZ36142.1| YihY family protein [Prevotella oralis ATCC 33269]
Length = 453
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 102/267 (38%), Gaps = 4/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R V +Y I+ F + MAS ++ S LL++ P +A G +
Sbjct: 40 RRLLYSVIKRLYLTIQFFTTKRTVDMASALTYSTLLAIVPICAVVFAIARGFGFSSHIEV 99
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ P+ I ++ + + I + + + + + N ++
Sbjct: 100 WFRDALSSQPQAAEAIIGFVNSYLVHAKSGVILGIGLIFMLWTVLMLIRNIEQTFNDIWQ 159
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS T + L V +V+ S + + +A V ++ + ++ G
Sbjct: 160 VKKKRSIMRTITDYLAMLFLIPVFIVLTSGISLF----MAMVAVKTDSILLVGPVVRFGI 215
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L ++LF+P K+ ++ I + ++ + ++ H + S+Y+ +
Sbjct: 216 NIMPYLLTVCVFTSLYLFMPNTHVKLKYVIIPGIISGVAMQLVQYVYIHSQIFLSSYNAI 275
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A++ ++++ + + GAE+
Sbjct: 276 YGSFAALPLFMLWVQISWSICLFGAEM 302
>gi|262384858|ref|ZP_06077990.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262293574|gb|EEY81510.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 316
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/273 (18%), Positives = 108/273 (39%), Gaps = 10/273 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++F I+ D ++ F+++ +++ ++ + L S+ P + + FL
Sbjct: 14 KLTMSLLFKILKDMVQGFIDDSVPRLSASLAYATLFSIIPLLSLLITIGVFLKMD-MAGQ 72
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAY 120
+ + + + I + TI +LA + F + + A ++ SLN +
Sbjct: 73 LYAQLEPILGISVVNALNSVIENAANSNSSTFATIVSLAVSVFGATAIFAEIQSSLNTIW 132
Query: 121 RVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + RL+SF +L+ + L++ + I +P + L+
Sbjct: 133 GIKAIPKKSWLKYLKNRLLSFSIILVFAFILLVTFMISNVIENLSVRFMTNYPDVAESLV 192
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ I+ ++ + LP AK KI I G I T I +VG + YI
Sbjct: 193 KVTG--IFLNIIVTTTIFALIFKILPDAKIKIKDIFTGAIVTTILLLVGQWGISLYI-NI 249
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ T+Y A + + ++Y + GAE
Sbjct: 250 ANVGTVYGTAAFLAVLITWIYYSAIIIYTGAEF 282
>gi|76817269|ref|YP_335903.1| putative ribonuclease [Burkholderia pseudomallei 1710b]
gi|76581742|gb|ABA51216.1| putative ribonuclease [Burkholderia pseudomallei 1710b]
Length = 337
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 52 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 111
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 112 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 171
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 172 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 227
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 228 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 286
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 287 GSFAVLLMWLYFSAAVLLL 305
>gi|119486031|ref|ZP_01620093.1| probable ribonuclease [Lyngbya sp. PCC 8106]
gi|119456806|gb|EAW37934.1| probable ribonuclease [Lyngbya sp. PCC 8106]
Length = 292
Score = 99 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 104/272 (38%), Gaps = 11/272 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TV 62
++ ++ + + ++ +A+ +S + S+ P ++ + GF+ Q V
Sbjct: 2 NLNTIWSLLKETFNEWQQDKVPILAAALSYYMIFSIAPILILVIAVVGFIVGEQIAQEEV 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
+ + A + + + TI A+ F + V A L+ +LN +
Sbjct: 62 FAQLESFFGSENAASLRTILQNQFNPSSNITATIIAVVTIIFGATTVFAQLKQALNLIWG 121
Query: 122 VVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V + + TR++S VL L++ + + A A++ + + +
Sbjct: 122 VEPKPGRGVKGFIQTRILSILMVLGIGFILLLSLIISSVLSGASAWLEQHLFIPSFVWSL 181
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + ++ + ++ LP + + G T + + +G L + Y+ S
Sbjct: 182 VD---LVISLSLTTLLFGQIYRVLPDVRIAWKDVAVGAGITAVLFTIGKSLISLYLGN-S 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ + Y S + LV+++ F+ GAE
Sbjct: 238 SIGSAYGAAGSFVIVLVWIFYSTQIFLFGAEF 269
>gi|153808202|ref|ZP_01960870.1| hypothetical protein BACCAC_02488 [Bacteroides caccae ATCC 43185]
gi|149129105|gb|EDM20321.1| hypothetical protein BACCAC_02488 [Bacteroides caccae ATCC 43185]
Length = 319
Score = 99 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 101/273 (36%), Gaps = 10/273 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + II D + F++++ +++ ++ + L S+ P + + L F
Sbjct: 17 KKKLSVSIKIIKDTFQGFIDDNVMRLSASLAYATLFSIIPLLSLLVTIGVLLNID-FTNQ 75
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAY 120
+ + + + + + TI ++ + ++ ++ SLN +
Sbjct: 76 LYAQLEPIVGSKVIDALQAIMENAETTDSFSFATIISIGVTIFGATTVFAEIQSSLNTIW 135
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + I RL+SF +L + L+I + I P + L+
Sbjct: 136 GIKAVPKKSWLKYIINRLLSFSVILAFAFILLITFTITNLITDISNKFITNNPDIAESLV 195
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I + + LP AK K ++ G + T + ++G + YI F
Sbjct: 196 KTIGMIINIG--VTTVIFTLIFKILPDAKIKSKDVIIGALVTTVLLLIGQWGISFYIG-F 252
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ T+Y A + + ++Y + GAE
Sbjct: 253 ANIETVYGAAAFMAIFITWIYYSAIIIYTGAEF 285
>gi|255010623|ref|ZP_05282749.1| putative ribonuclease [Bacteroides fragilis 3_1_12]
gi|313148434|ref|ZP_07810627.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137201|gb|EFR54561.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 314
Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 108/269 (40%), Gaps = 12/269 (4%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
++F II D + F+++ +++ ++ + L S+ PF+ + F + +
Sbjct: 15 LLFKIIKDTVWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTVGVFFHMDLANQLYVQLQ 74
Query: 67 FGAWPE--VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
PE + I + + + + ++ + + ++ ++ SLN + +
Sbjct: 75 PIVGPEITGALRSIIENAENTDSSRSAAIVSLGI--SIFGATTIFAEIQSSLNTIWGIKA 132
Query: 125 MR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + R++SF +L+ + L++ + I +P + L+ +
Sbjct: 133 VPKKSWLKFIKNRILSFSIILVFAFILLVTFTITSIIGELSKKFMVNYPEIAGSLVQVVG 192
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I + A+ LIF LP AK K + G I T + +VG + YI +
Sbjct: 193 IIINIGVTAIIFTLIF--KILPDAKIKSRDVFIGAIVTTLLLLVGQWGISFYIG-IANVG 249
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T+Y A ++ + ++Y + GAE
Sbjct: 250 TVYGAAAFMVVFVTWIYYSSIIIYTGAEF 278
>gi|262038469|ref|ZP_06011843.1| putative ribonuclease BN [Leptotrichia goodfellowii F0264]
gi|261747564|gb|EEY35029.1| putative ribonuclease BN [Leptotrichia goodfellowii F0264]
Length = 433
Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 106/271 (39%), Gaps = 12/271 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++++ F +I ++ + + +A ++ ++++VFP + + G + V
Sbjct: 19 IKKHIREAFQMINLIYRNYSDGETQILACTLTYFSMIAVFPILALVLGITKGFGLDKLV- 77
Query: 61 TVIDVVFGAWP--EVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLN 117
I +F P E + + + D ++LA G+ T + + + + L + N
Sbjct: 78 --IHKIFELVPQNEGMVRTVLDIANKLLASTQGGILTGVGVVILINSAIKVLMMLEDAFN 135
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + + + RS R++ + ++ L+I+ + V K L +I+
Sbjct: 136 KIWHISKNRS-MTRRIVDYVAIIFLGPILIIVIVATNSF-----VVEKMSTMLFGGTVIV 189
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
L + +P K+ I T + V V FT + +
Sbjct: 190 NIFLHVFGPLFYVFLFTLLFYVIPNTNVKLKPAFISGIITVLLCYVLKVAFTWLQSSITK 249
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ +Y LA + L ++ + V +LGA++
Sbjct: 250 YNAIYGSLALVPIFLTWVQYMWVTILLGAQI 280
>gi|77414094|ref|ZP_00790262.1| putative ribonuclease BN [Streptococcus agalactiae 515]
gi|77159846|gb|EAO70989.1| putative ribonuclease BN [Streptococcus agalactiae 515]
Length = 196
Score = 99 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 3/171 (1%)
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
S + +L+ ++N+AY V + R + I+RL+ G L+ L + L +
Sbjct: 1 SKSLTSLQKAINKAYGVDQHRDFVISRLVGVGTGLIILFLLTFVLIFSTFSKPVLQIIVN 60
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVG 224
+ L + N T L +F+G+ ++ LP A+ K+ ++PG +F+
Sbjct: 61 MYDLGDTLTAWLLNLAQPVTFLTIFLGIGILYFILPNARIRKVRYVIPGTLFSTFVIGFF 120
Query: 225 AVLFTHYIVTFSTYSTMYAGLAS--IMTCLVFLYMLGVFFILGAELNASMI 273
+ L + Y++ S I +++ L ILGA LNAS+
Sbjct: 121 SNLISQYVLNRVEKMVDIKTFGSVVIFILMLWFIFLAHIMILGAILNASVQ 171
>gi|285017226|ref|YP_003374937.1| hypothetical protein XALc_0414 [Xanthomonas albilineans GPE PC73]
gi|283472444|emb|CBA14949.1| hypothetical protein XALc_0414 [Xanthomonas albilineans]
Length = 314
Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 58/279 (20%), Positives = 103/279 (36%), Gaps = 29/279 (10%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F E D A+ +S ALLS+ P +V L L Q +I +
Sbjct: 35 LARRFTEIDLMTQAASLSFYALLSLAPLLVLLLWLTASL-YPQAQQALIAQIGQLAGNGA 93
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYF-------SSNGVEALRISLNRAYRVVEMR- 126
I P I +LA + ++ L+ +LN +R + +
Sbjct: 94 RDVAQTVIDNAKHQPN-----IGSLAGLWSTLLLFVGATAVFAQLQNALNLIFRTDKQQL 148
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
W R+ SFG V L+I + + +A A + PA+G
Sbjct: 149 DGFLPWLKKRVFSFGVVFALGFLLLISMILTTVLQVAFARMPSLLPAVG----------Y 198
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++T+ + ++ +LP + + + G T +V+G YI T + S Y
Sbjct: 199 FSTLAIYVLAFAVLYHYLPDRRVEWRQAIIGGAITACLFVIGRYAIGVYIATAAPGSA-Y 257
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ + + LV++Y V F +GA + A + ++P
Sbjct: 258 GSMGAPVILLVWIYYATVVFFVGALITAVIDERQRARRP 296
>gi|85711512|ref|ZP_01042570.1| Ribonuclease BN [Idiomarina baltica OS145]
gi|85694664|gb|EAQ32604.1| Ribonuclease BN [Idiomarina baltica OS145]
Length = 282
Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 101/278 (36%), Gaps = 8/278 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVI 63
F + A H++ +LLS+ P +V + +
Sbjct: 7 LKHGFKFSRHVALRSQSDSINVTAGHLTYVSLLSLVPLLVVTFTVFSAFPVFDDLKNNIE 66
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+F + + + I + + ++ + + + + + A+ +LN +R
Sbjct: 67 SALFANLLPTSGEQLKEYIDEFVGNASQ-MTAVGIAFLFFVAVALISAIDSALNNIWRDT 125
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R W ++ I + + L V + + + + + + LL
Sbjct: 126 SSRRWTVSFAIYWMILTLGPVLIGTGLAATSYLVSLSQFAETYVSGIRSFLLS------A 179
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ FI + ++ +P K G F+ I + V LF+ YI F TY +Y
Sbjct: 180 VPVVTSFIAFVLLYQLVPNRPVKFRYAAFGAAFSAILFEVSKQLFSLYITHFPTYQAIYG 239
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
LA++ +V++Y+ + + GAE+ S+ Y K
Sbjct: 240 ALATVPILIVWIYLSWLIVLAGAEMTVSLEEYRLIHKK 277
>gi|121605663|ref|YP_982992.1| putative ribonuclease BN [Polaromonas naphthalenivorans CJ2]
gi|120594632|gb|ABM38071.1| tRNA-processing RNAse BN [Polaromonas naphthalenivorans CJ2]
Length = 404
Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 94/256 (36%), Gaps = 9/256 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
F E+ AS ++ + +++ PF + + ++ +V P+ I
Sbjct: 28 NRFREDRMGLTASSLTFTTSIALVPFFTVALAVFTAFPMFSKLQGALEAWLVKSLIPDNI 87
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q + A L + + + +LN +RV + R LI
Sbjct: 88 ARQVLGYLTQ-FSGQASKLGVAGLAVLVVTAIALILTIDRTLNSIWRVRKPRPLGQRVLI 146
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L V + A + + P LL + + G+
Sbjct: 147 YWAAITLGPLVLAASLAVTSYVVSASSGLVGALPFSLRFLLDVAQ------FFLVAGGVA 200
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F G + Y+ TYS +Y A++ LV+
Sbjct: 201 ALYRYVPNTYVQWAHAFAGGLFVAAGLETGKKVMGIYLTAVPTYSLVYGAFAALPILLVW 260
Query: 255 LYMLGVFFILGAELNA 270
+Y+ + ++GA + A
Sbjct: 261 IYVSWIIVLMGAVITA 276
>gi|307150261|ref|YP_003885645.1| ribonuclease BN [Cyanothece sp. PCC 7822]
gi|306980489|gb|ADN12370.1| ribonuclease BN [Cyanothece sp. PCC 7822]
Length = 304
Score = 99.5 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 108/278 (38%), Gaps = 18/278 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ ++ + + ++ M + +S +L S+FP ++ ++ F + ++ +
Sbjct: 14 IVQLLIRTVLKWQQDQCLEMGAALSYYSLFSLFPTLLVILSIFSFFLGPNTEAYNQILHL 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + I + ++ + + G + + +S + L S+N+ ++V +
Sbjct: 74 AKEGLPSEAFQIIEETLIH-MNQSSVGAGIVGFSILFFSASQAFDVLSRSINKIWQVPQK 132
Query: 126 -----------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--- 171
++ R+ +F VL + +++ + L L + +
Sbjct: 133 YHSKRKIITALLNFIQARIFAFTLVLGTAGIILLSLIFNILTKLLLFLLENVAATVNFIK 192
Query: 172 -NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+ ++ ++ T L + ++ + LP+ K K I G + T S L ++
Sbjct: 193 IDKAFLVAKIQLGTTFFLLLLVVMILFKILPSTKIKWRDIWLGSLLTATSLFFLQQLASN 252
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ T Y + +M L+++Y+ F LG+E
Sbjct: 253 SVIRIGTRFQYYGVIGGVMVLLLWIYLTCEIFFLGSEF 290
>gi|94498872|ref|ZP_01305410.1| Ribonuclease BN [Oceanobacter sp. RED65]
gi|94428504|gb|EAT13476.1| Ribonuclease BN [Oceanobacter sp. RED65]
Length = 393
Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/264 (15%), Positives = 100/264 (37%), Gaps = 7/264 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFG-ANLAGFLGAHQFVPTVID 64
F + I+ F D A+ ++ ++L ++ P I L + +
Sbjct: 2 KPFFRFWWFVIQRFFYNDNRKTAADLTYTSLFALVPLITATYIALTALPIFSEVADDIQG 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+F + + +L + A+ L + + + + + L + N+ +RV
Sbjct: 62 FIFAHFIPSSGAVVEKYLLD-FSQQARKLTAVGLILLFISAISLMHGLEEAFNQIWRVKT 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R RLI + V+ + + + F+ + ++ + L N+ ++ + +
Sbjct: 121 RR--IGRRLILYWLVMFLTPISMAVIFLVGSYLMSTSIWIDHVDGLLNINRLLIDALPW- 177
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + L ++ F+P K L G + + +F + + Y +Y
Sbjct: 178 --LMSIMTLTTIYYFIPTGKVYFWQALLGGVLATAILDLSQWVFVTMVASMPNYKIVYGA 235
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
A+I L++L+++ + + AE+
Sbjct: 236 FAAIPLFLIWLFLVWLVILFVAEV 259
>gi|119511130|ref|ZP_01630248.1| hypothetical protein N9414_16961 [Nodularia spumigena CCY9414]
gi|119464225|gb|EAW45144.1| hypothetical protein N9414_16961 [Nodularia spumigena CCY9414]
Length = 316
Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 109/273 (39%), Gaps = 12/273 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
+ ++ + + + +AS ++ ++ S+ P +V + G G V
Sbjct: 9 TLRKIRRLLTEIFSDWQLNEVPLLASSLAYYSVFSLAPLLVLLIMIVGTIFGESVVQEEV 68
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA-LAAAYFSSNGVEA-LRISLNRAY 120
I + + E AK I+ I+ + + F I L F + GV ++ +LNR +
Sbjct: 69 ISQLSKLFGEEGAKLISTAIVNLRVDSREQTFQIVFNLGFLLFGATGVFTQIQAALNRIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+V + + R++ F VL+ +V L++ + + ++ + P G L
Sbjct: 129 KVKPVPRHHVLNLLHKRVLCFLMVLVIAVVLILFFVSNAILARLVIFLNELVPGSGYLWQ 188
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + T + ++ LP A+ + G + T + ++VG LF ++
Sbjct: 189 FMS---LLITFGGTTLMFTMMYSILPDAEIAWRDTIVGALITSVLFLVGQYLFGQFLSR- 244
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ + + Y S + + +++ LGAE
Sbjct: 245 TNFGSAYGVAGSFVIVITWIFFAAHILFLGAEF 277
>gi|170693014|ref|ZP_02884175.1| ribonuclease BN [Burkholderia graminis C4D1M]
gi|170142012|gb|EDT10179.1| ribonuclease BN [Burkholderia graminis C4D1M]
Length = 312
Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 101/274 (36%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
F + +A + F+ + MA+ + + S+ P ++ +AG F G + + V
Sbjct: 21 FTTVVNAGKRFMSDRCPMMAASVGFYSAFSLAPTLLMVLAVAGWFFGEDAARGRLFEQVR 80
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G + A+ + + G+ + S + +S +L +L+ +
Sbjct: 81 GIMGKDAAEAMQTIVEHAHRASGSGIAAVVSVVLLIIGASATFTSLNTALDVVLEAEKNV 140
Query: 127 -------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
TRL+S G VL LV+ + A+ + L+++
Sbjct: 141 KSKGSITWLVRTRLVSVGMVLGLGFLLVVSLVL----DTAITFAGHAIFGDSPLVVVTAI 196
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ L + ++ A + G + I + VG LF Y+ T +
Sbjct: 197 VQTVLGLIVLGAAFTALLRWMSDAPVSLAHAAVGGMTAAILFSVGRHLFGLYLTHAGT-A 255
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + S+ +++LY F+ GAE A +
Sbjct: 256 SSFGAAGSLAVLMMWLYFSAAVFLFGAETTAELA 289
>gi|34496265|ref|NP_900480.1| ribonuclease BN/unknown domain fusion protein [Chromobacterium
violaceum ATCC 12472]
gi|81656737|sp|Q7NZV9|Y810_CHRVO RecName: Full=UPF0761 membrane protein CV_0810
gi|34102119|gb|AAQ58486.1| ribonuclease BN [Chromobacterium violaceum ATCC 12472]
Length = 417
Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 94/272 (34%), Gaps = 10/272 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF--VP 60
+ F ++ ++ + LL++ P ++
Sbjct: 19 QRLEPYFGFARFIARRMSCLRVLQISGSLTFTTLLALVPLFTIALSVISAFPVFSDYSTR 78
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I ++ PE K IT + Q A+ L + + + + + N +
Sbjct: 79 FKIMLLSTLVPEFAGKVITVYMRQFADN-AEKLTAAGIVMLGVTALMLMSTIERTFNAIW 137
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R W S Y + ++ +++ L+ ++ K NL L+
Sbjct: 138 GVRRGRPWLQQ---SMVYWTVLTLGPLVLGGSL----LSWRWLFKATRLEKNLPLLASVL 190
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
T++ + L ++ +P + G + T + + + F YI ++Y
Sbjct: 191 EAGGTIVLTALVLALLYRIVPNRFVPFRHAVWGALVTSVLLELTKMGFGFYIGQVASYQL 250
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y ASI L+++Y L + + GA +++
Sbjct: 251 VYGAFASIPIFLLWVYCLWLVVLAGAVFTSAL 282
>gi|288800919|ref|ZP_06406376.1| YihY family protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288332380|gb|EFC70861.1| YihY family protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 441
Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 107/268 (39%), Gaps = 4/268 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R +F V +++ +I F + AS ++ S+LL+V P +A G +++
Sbjct: 27 LRYFFYNVIKVLFLSIRFFTTKRIMDYASALTYSSLLAVVPICAVVFAIARGFGYSKYIE 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ P+V I ++ + I + + ++ N +
Sbjct: 87 VWFRGALDSQPQVAETIIGFVNSYLVHTKSGVFLGIGLIFMLWTIIMLTRKTELTFNDIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R+ T + + + +V+ S + + I + LG+++ I
Sbjct: 147 NVKSERTIVRTFVDYIAMFFIIPIMIVLTSGISIYISTIADKAHAY-TFLGSMMEGIIAL 205
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
YA M +FI ++F+P KI S + I + + + ++ + + S+Y+
Sbjct: 206 MPYAIMSIVFILF---YVFMPNTNVKIRSTIVPGILSGFAMQLLQYVYINSQIFLSSYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ +++L + + GAEL
Sbjct: 263 IYGSFAALPLFMLWLQLSWTICLFGAEL 290
>gi|223940104|ref|ZP_03631967.1| ribonuclease BN [bacterium Ellin514]
gi|223891206|gb|EEF57704.1| ribonuclease BN [bacterium Ellin514]
Length = 548
Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 77/204 (37%), Gaps = 6/204 (2%)
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVE 124
V GA P K + +I + + G + ++ + + + + + + N + V
Sbjct: 182 VPGAKPVDARKQVAKQINEFIQNTRTGTLGLTGSVLLVFVAISMLSRIEEAFNDIWGVTR 241
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RSW +R++ + V+ + ++ + P LA R L + +
Sbjct: 242 GRSWL-SRIVQYWAVITLGPIFLALALGLSSGPQLLATKR----FLEQMPVASGLLFKLL 296
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L + ++ +P K + + G I W + +Y+ T S Y
Sbjct: 297 PVVVLCLSFGLFYMLMPNTKVSWKAAVVGGTVGGILWHFNNMFSVYYVSRVVTNSRFYGS 356
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
L + +V LY + + GA++
Sbjct: 357 LGMVPVFMVGLYFSWLILLFGAQV 380
>gi|94314728|ref|YP_587937.1| ribonuclease BN, putative [Cupriavidus metallidurans CH34]
gi|93358580|gb|ABF12668.1| ribonuclease BN, putative [Cupriavidus metallidurans CH34]
Length = 321
Score = 99.5 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 101/266 (37%), Gaps = 9/266 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFG 68
++ +I +++ + + +S L S+ P +V ++AG F GA + +
Sbjct: 34 RVVSASINSWLDHRAASKGAALSFYMLFSLAPILVLVISIAGLFFGAEAARGEIFAQIQD 93
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEM-- 125
A I + G+ + A + +++ L+ SL+ +
Sbjct: 94 LVGAKGAAAIEGILAATHRAGGSGVAAVIATGILFVGATSAFAELKSSLDDIWHAPPPAG 153
Query: 126 ---RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ RL+SF VL+ + L++ V A+ + + + + A +
Sbjct: 154 AGWQKLLRARLLSFSIVLVLAFMLLVSLIVNAALAVIDRFWGQLWTATW-FAPVAEGIST 212
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + LP A+ ++ G + T + + VG L Y+ S ++ Y
Sbjct: 213 LFSFAVVTALFAVIFKMLPNARIAWRDVMMGSVITALLFAVGKRLIGLYLGN-SAVASSY 271
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
S++ ++++Y F GAEL
Sbjct: 272 GAAGSVVALMLWIYYSAQIFFFGAEL 297
>gi|302522751|ref|ZP_07275093.1| ribonuclease BN [Streptomyces sp. SPB78]
gi|302431646|gb|EFL03462.1| ribonuclease BN [Streptomyces sp. SPB78]
Length = 317
Score = 99.1 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 93/273 (34%), Gaps = 6/273 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG+ A ++L +L+V P ++ L+ L +
Sbjct: 33 WQLVRDSFVRFRYADGFTNARALALQTVLAVIPLVIAFVGLSTSLHTENLGRLAQLTIHS 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG---LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + G A+ + + + + NR Y
Sbjct: 93 VAAGPSTEVVDEALERGEYAAGDGDEIALWFGAIFSLVNVTTAMCQIERGANRIYGNERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYA 184
R +++ L A + L + V +A + LG+ +W R
Sbjct: 153 RPFHLKYGRGLVMALTAGIPLGLGFVVMIAGGDLAGAATTVY-GLGDHARTVWEYARWPV 211
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L I V P K + L G W + L + Y+ ++ T+Y
Sbjct: 212 GLLLALIAASVVFRSAPRRKQPGYTWLAFGAGVYLSLWTLLTWLLSLYLRLSGSFDTVYG 271
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L++ M+ L++ Y+ V LG A +
Sbjct: 272 PLSAFMSLLLWAYLTSVALFLGLSFAAQLEASR 304
>gi|282877902|ref|ZP_06286711.1| YihY family protein [Prevotella buccalis ATCC 35310]
gi|281299903|gb|EFA92263.1| YihY family protein [Prevotella buccalis ATCC 35310]
Length = 453
Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 110/270 (40%), Gaps = 8/270 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + + A++ F+ + +A+ ++ S LL++ P +A G +++
Sbjct: 27 LQYLLISIVKKLSLAVKFFLTKGTGDLAAALTYSTLLAIVPICAVVFAVARGFGFSKYIE 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
A+ I + ++ + + + L + + + N
Sbjct: 87 QWFRNALSG-QSQAAEIIIGFVNSYLVHTQSGVILGVGLLFMLWTVLRLTRTIEQTFNNI 145
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
++V R+ + T V L + +V++S + + + + + + L ++
Sbjct: 146 WQVKHERTLFRTVTDYLAMVFLMPILIVLISGISIFMTAFVDRAQGYML----LAPMLQI 201
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G + + I +++F+P K KI + I+PG I ++ V + + H + S+Y
Sbjct: 202 GLKVMPFIIMSCVFIGLYIFMPNTKVKITAAIVPG-ILAGVAMQVLQLFYIHGQMLLSSY 260
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +Y A++ ++++ + + GA+L
Sbjct: 261 NAIYGSFAALPLFMLWVQISWTICLFGAQL 290
>gi|262191240|ref|ZP_06049437.1| ribonuclease BN [Vibrio cholerae CT 5369-93]
gi|262032874|gb|EEY51415.1| ribonuclease BN [Vibrio cholerae CT 5369-93]
Length = 276
Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 95/248 (38%), Gaps = 10/248 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKPITDEILQV 85
M +++ LLS+ P + ++ VI D V + + + +++
Sbjct: 1 MPGYLAYITLLSMVPMLTVLLSILSSFALFANAGEVIQDFVITHFVPAAGEVVKTALIEF 60
Query: 86 LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
+A + + + + + +LN +RV + R + + +
Sbjct: 61 VAN-TGKMTAVGGAFLFVAAIMLISNIDKNLNYIWRVQQKR-------RAVFSFSMYWMI 112
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLALFIGLIFVHLFLPAAK 204
L + + A A +Y+ L ++N + + + + ++L +P K
Sbjct: 113 LTLGPILVGASIAATSYITSLKILDNEALSGVYNLFLRWLPFVLSYCAFVGLYLLVPNKK 172
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ G + I + + F YI F +Y +Y LA+I V++Y+ + ++
Sbjct: 173 VHWQHAMLGALIAAILFELSKKGFAAYITQFPSYQLIYGALAAIPILFVWVYLCWLIVLV 232
Query: 265 GAELNASM 272
GAE+ A++
Sbjct: 233 GAEVTAAL 240
>gi|269959427|ref|ZP_06173810.1| tRNA processing ribonuclease BN [Vibrio harveyi 1DA3]
gi|269835864|gb|EEZ89940.1| tRNA processing ribonuclease BN [Vibrio harveyi 1DA3]
Length = 314
Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 93/263 (35%), Gaps = 8/263 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
++ + A +++ LLS+ P + ++ + V + +
Sbjct: 22 FFKYLLKRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFENVGETLQGYIIDN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + ++ + + + + + +LN +RV + R
Sbjct: 82 FVPASGDAVRTALQEFVSN-TGKMTAVGGAFLFVAALMLISNIDKNLNYIWRVKDKRRPV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + VL LV S + +L + L + +L
Sbjct: 141 FSFSM-YWMVLTLGPILVGASIAATSYVTSLKLIEN-----ETLSGAYNLFLRWLPLLLS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + ++ +P K + G + + + F YI F +Y +Y LA+I
Sbjct: 195 FFAFMGLYFLVPNKKVYLSHGAVGAAIAAVLFELSKKGFAFYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + ++GAE+ A++
Sbjct: 255 ILFVWVYLCWLIVLIGAEVTAAL 277
>gi|163858249|ref|YP_001632547.1| BrkB transmembrane protein [Bordetella petrii DSM 12804]
gi|163261977|emb|CAP44279.1| BrkB transmembrane protein [Bordetella petrii]
Length = 324
Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 104/280 (37%), Gaps = 9/280 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVV 66
++ ++ D+ + + + + +SL + S+ P ++ +AG F G + V
Sbjct: 35 IYGLLVDSAKQWSGHRASSKGAALSLYMVFSLAPMLILVIAVAGIFFGEEAVRSELFAQV 94
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEM 125
A+ I + + + S + ++ L+ SL+ +
Sbjct: 95 RDLTGARGAEVIQTVLASAHESGGGWIAALLSIAVLLFSATTAFAELQASLDELWDATSQ 154
Query: 126 R-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R +R++SFG VL+ ++ L++ + A+ A Y + +L W
Sbjct: 155 RKSGLQGMVRSRMVSFGLVLVLALFLLLSLIMNAALGAAKGYYGDLWTHSAFAVLAGWLS 214
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ + + V+ LP+ ++PG I T ++VG Y+ +
Sbjct: 215 NLF-SFAVVTALFAVVYKLLPSIAIPWRDVIPGAIVTAALFLVGKWGIGLYLGR-GGTVS 272
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y S++ L+++Y F GA + +K
Sbjct: 273 AYGAAGSLIALLLWIYYSAQIFFFGAVFTRQFAERFGSRK 312
>gi|333023545|ref|ZP_08451609.1| putative ribonuclease BN [Streptomyces sp. Tu6071]
gi|332743397|gb|EGJ73838.1| putative ribonuclease BN [Streptomyces sp. Tu6071]
Length = 317
Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 93/273 (34%), Gaps = 6/273 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG+ A ++L +L+V P ++ L+ L +
Sbjct: 33 WQLVRDSFVRFRYADGFTNARALALQTVLAVIPLVIAFVGLSTSLHTEDLGRLAQLTIHS 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG---LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + G A+ + + + + NR Y
Sbjct: 93 VAAGPSTEVVDEALERGEYAAGDGDEIALWFGAIFSLVNVTTAMCQIERGANRIYGNERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYA 184
R +++ L A + L + V +A + LG+ +W R
Sbjct: 153 RPFHLKYGRGLVMALTAGIPLGLGFVVMIAGGDLAGAATTVY-GLGDHARTVWEYARWPV 211
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L I V P K + L G W + L + Y+ ++ T+Y
Sbjct: 212 GLLLALIAASVVFRSAPRRKQPGYTWLAFGAGVYLSLWTLLTWLLSLYLRLSGSFDTVYG 271
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L++ M+ L++ Y+ V LG A +
Sbjct: 272 PLSAFMSLLLWAYLTSVALFLGLSFAAQLEASR 304
>gi|171058203|ref|YP_001790552.1| ribonuclease BN [Leptothrix cholodnii SP-6]
gi|170775648|gb|ACB33787.1| ribonuclease BN [Leptothrix cholodnii SP-6]
Length = 424
Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 103/271 (38%), Gaps = 17/271 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID- 64
D + F E+ AS ++ + +++ P + ++
Sbjct: 34 WPWLDTLRTLRLRFREDRLGVTASSLTFTTTIAMVPMATVMFAVFTAFPMFGTFRKALET 93
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ P+ IAKP+ ++ Q A+ A + + + + + + +LN +RV
Sbjct: 94 YLIQNLVPDQIAKPVLLQLSQ-FALKANRVGAVGLVLLGITAIALLLTIDRALNAIWRVR 152
Query: 124 EMRSW----YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ R + I+ LL V+L I S+ A ++ + + +L +
Sbjct: 153 QPRPIAQRVLVYWAIATLGPLLLGVSLSITSYALSASKGFVSALPGGVSLMLDLTELALM 212
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
A + F+P + + + G +F I + + Y+ TY+
Sbjct: 213 AAGMAALF----------RFVPNTPVRWVHAISGGVFVAIGFDLAKRALAWYLGLAPTYT 262
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
T+Y A++ L+++Y+ V +LGA + A
Sbjct: 263 TIYGAFATVPILLIWIYLGWVIVLLGAVIAA 293
>gi|167646668|ref|YP_001684331.1| ribonuclease BN [Caulobacter sp. K31]
gi|167349098|gb|ABZ71833.1| ribonuclease BN [Caulobacter sp. K31]
Length = 330
Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 93/271 (34%), Gaps = 8/271 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ A++ D +S LL+VFP + L L + D +
Sbjct: 38 ILRVMGLALQRLWGRDVMLYVGGVSFFILLAVFPGLAILIGLFSLLLTPEQAAFQADKLS 97
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVE 124
P E+ ++ P + + + + Y + G +AL L+ + +
Sbjct: 98 LLMPSGARPIFQSELARLSHAPERAISAQSAVVLVIGLYAAHRGFKALLAGLSFIHDEED 157
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + ++ ++ A L +MS VF+ L + + A + + W
Sbjct: 158 QRGFLGFNFMALVVLVAAFALLFVMSGVFLTFRLLSSTLGLRPLAGVSWIQSEWTW---- 213
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L +G+ ++ + + + + G + V + Y+ + Y
Sbjct: 214 ASAGLLVGMTLIYRYAMSRAPVGWRASMSGGAAAAVMCVFMSWASAFYVEQVAHLGATYG 273
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
+++++ L++L G L M I
Sbjct: 274 SISAVIIFLIWLSWSVNAVFYGGALATEMEI 304
>gi|68248882|ref|YP_247994.1| ribonuclease BN [Haemophilus influenzae 86-028NP]
gi|145628607|ref|ZP_01784407.1| ribonuclease BN [Haemophilus influenzae 22.1-21]
gi|81175004|sp|Q4QNR3|Y384_HAEI8 RecName: Full=UPF0761 membrane protein NTHI0384
gi|68057081|gb|AAX87334.1| tRNA processing ribonuclease BN [Haemophilus influenzae 86-028NP]
gi|144979077|gb|EDJ88763.1| ribonuclease BN [Haemophilus influenzae 22.1-21]
Length = 269
Score = 99.1 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 105/260 (40%), Gaps = 10/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
+ F E +A ++ S +L++ P ++ ++ ++ + +++F +
Sbjct: 11 FWKRFSENKLNQVAGALTYSTMLAIVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + I Q ++ +K + + ++ + + + +LN + + RS +
Sbjct: 71 ASDMVGEYIDQFVSN-SKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFA 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + + L + + + + I + L + L +
Sbjct: 130 IYWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGL--------KLLSFVPFLFTWFIF 181
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K KI G I + +G FT Y+VTF +Y +Y +A++ L+
Sbjct: 182 TLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYVVTFPSYQLIYGAMATLPIMLL 241
Query: 254 FLYMLGVFFILGAELNASMI 273
++ + + ++GA+L +++
Sbjct: 242 WIQISWLVVLVGAQLASTLD 261
>gi|307251223|ref|ZP_07533144.1| hypothetical protein appser4_19840 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307258055|ref|ZP_07539807.1| hypothetical protein appser10_20350 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307262452|ref|ZP_07544097.1| hypothetical protein appser12_19920 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306856739|gb|EFM88874.1| hypothetical protein appser4_19840 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306863418|gb|EFM95349.1| hypothetical protein appser10_20350 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306867829|gb|EFM99660.1| hypothetical protein appser12_19920 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 274
Score = 99.1 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 111/272 (40%), Gaps = 10/272 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGA 69
I ++H+ + A +++ S L++ P ++ ++ Q + +++
Sbjct: 6 FIKLLLKHWKIHNIPVSAGYLTYSTTLAIVPLVMVVFSIFTAFPIFQEATEQLKTLIYDN 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + I + +K + +S + + ++++ +LN+ +R RS +
Sbjct: 66 FAPNAGDMVEEYI-DLFVANSKKMGIVSTIGLVVVALMLIQSIDETLNKMWRNHRKRSIF 124
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN-LLLIIWNGRIYATMLA 188
I+ LL +V L I + +Y+ N LL Y L
Sbjct: 125 IS-------FLLYAVILFIAPLLAGGSIAISSYIFSMAIFNENGLLSFSQQLLQYTPFLL 177
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+++ V+ +P K I+ + G I I + +G F YI TF +Y +Y LA +
Sbjct: 178 IWLLFTTVYWLVPNTKVNILHAMLGAIVAAIFFTLGKQAFVWYISTFPSYQAIYGALAVL 237
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ + G + +++ +Y KK
Sbjct: 238 PIMLLWIHLSWQVVLFGGLITSTLNVYNEMKK 269
>gi|289805158|ref|ZP_06535787.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 267
Score = 99.1 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 46/255 (18%), Positives = 88/255 (34%), Gaps = 10/255 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N +L +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRILPLLLSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ +P + L G + + G F YI F +Y +Y LA I
Sbjct: 191 ISFWLLYSIVPTTRVPNRDALVGAFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILG 265
V++Y +LG
Sbjct: 251 LFVWVYWTWCIVLLG 265
>gi|309750307|gb|ADO80291.1| tRNA processing exoribonuclease BN [Haemophilus influenzae R2866]
Length = 269
Score = 99.1 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 40/265 (15%), Positives = 106/265 (40%), Gaps = 10/265 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
+ F E +A ++ S +L++ P ++ ++ ++ + +++F +
Sbjct: 11 FWKRFSENKLNQVAGALTYSTMLAMVPLVMVIFSIFSSFPVFNEVTGELKEMIFTNFAPS 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + I Q ++ +K + + ++ + + + +LN + + RS +
Sbjct: 71 ASDMVGEYIDQFVSN-SKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFA 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + + L + + + + I + L + L +
Sbjct: 130 IYWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGL--------KLLSFVPFLFTWFIF 181
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L+
Sbjct: 182 TLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLL 241
Query: 254 FLYMLGVFFILGAELNASMIIYYWR 278
++ + + ++GA+L +++ +
Sbjct: 242 WIQISWLVVLVGAQLASTLDEIREQ 266
>gi|328952421|ref|YP_004369755.1| ribonuclease BN [Desulfobacca acetoxidans DSM 11109]
gi|328452745|gb|AEB08574.1| ribonuclease BN [Desulfobacca acetoxidans DSM 11109]
Length = 309
Score = 99.1 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 110/267 (41%), Gaps = 10/267 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVV 66
V+ ++ + + + ++ + + ++ + S+ P ++ + GF G ++ +
Sbjct: 16 VWSLLKETYQEWSTDNAPQLGAALAFYTIFSLAPILIIIMAVVGFFLGKESVQIYLMQEL 75
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEM 125
G AK I + + + TI+A++ S + L+ +LN + V
Sbjct: 76 TGFVGLENAKNIMHIVQRSYKPGSGLTATITAISLMLLGSTTIFVTLKNALNTMWGVKYQ 135
Query: 126 R----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ I RL SF V+L + L + + + +A +++ +FP L+ + G
Sbjct: 136 PAGLVNSIIDRLKSFFTVILVGLVLFLSMLISSVVAMADSFIGMYFPLPVILVQTLNTG- 194
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++L + + LP + ++ G T + + +G L Y+ ++ S+
Sbjct: 195 --LSLLLFTLMFALLFKVLPDVRLSWRAVGVGAGITALLFGLGKNLLGAYLAR-TSVSSA 251
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y S++ L+++Y +GAE
Sbjct: 252 YGAAGSMVVLLLWVYYSAQIIFIGAEF 278
>gi|145639810|ref|ZP_01795411.1| ribonuclease BN [Haemophilus influenzae PittII]
gi|145271028|gb|EDK10944.1| ribonuclease BN [Haemophilus influenzae PittII]
Length = 268
Score = 99.1 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 105/260 (40%), Gaps = 10/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
+ F E +A ++ S +L++ P ++ ++ ++ + +++F +
Sbjct: 10 FWKRFSENKLNQVAGALTYSTMLAIVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 69
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + I Q ++ +K + + ++ + + + +LN + + RS +
Sbjct: 70 ASDMVGEYIDQFVSN-SKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFA 128
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + + L + + + + I + L + L +
Sbjct: 129 IYWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGL--------KLLSFVPFLFTWFIF 180
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L+
Sbjct: 181 TLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLL 240
Query: 254 FLYMLGVFFILGAELNASMI 273
++ + + ++GA+L +++
Sbjct: 241 WIQISWLVVLVGAQLASTLD 260
>gi|238785626|ref|ZP_04629604.1| tRNA-processing ribonuclease BN [Yersinia bercovieri ATCC 43970]
gi|238713461|gb|EEQ05495.1| tRNA-processing ribonuclease BN [Yersinia bercovieri ATCC 43970]
Length = 273
Score = 98.8 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 102/269 (37%), Gaps = 9/269 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 2 LYSRIDKDGLTMLAGHLAYVSLLSLVPLITVVFALFAAFPMFADISIKLKAFIFSNFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN+ +R RS +
Sbjct: 62 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNQIWRSKTPRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S V + L+L ++ + +I +L ++
Sbjct: 121 V-YWMVLTLGPILVGASMVISSYLLSLQWLAN-----AQVDSMIDEILRVFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G FT YI F +Y MY LA I +
Sbjct: 175 WLLYSVVPTVRVPARDALIGALVAALLFELGKKGFTMYITLFPSYQLMYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYY-WRKKP 281
++Y +LGAE+ ++ Y R KP
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRALRHKP 263
>gi|296105424|ref|YP_003615570.1| ribonuclease BN [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059883|gb|ADF64621.1| ribonuclease BN [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 293
Score = 98.8 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 101/270 (37%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ E++ +A +++ +LLS+ P + L V + VF +
Sbjct: 20 LKLLWHRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFSAFPMFAEVSLQLRHFVFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I + I Q +A +K + + A + + ++ +LN +R ++R
Sbjct: 80 IPATGDVIQNYIEQFVANSSK-MTAVGACGLIVTALLLMYSIDSALNTIWRSKKVRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L I N ++ +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNGAIDNVLRIFPLILSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ +P + + G + + + +G F YI F +Y +Y LA I
Sbjct: 191 LSFWLLYSVVPTTRVPNRDAVVGALVAAVLFELGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ ++ +Y KK
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGVYRELKK 280
>gi|322369825|ref|ZP_08044387.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
gi|320550161|gb|EFW91813.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
Length = 262
Score = 98.8 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/262 (17%), Positives = 97/262 (37%), Gaps = 13/262 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V + I ++ E + +A+ + A +S+FP ++ + F+G +F +ID
Sbjct: 3 VTESIRSVVDIVRERNVTFLAASFAYYAFVSLFPLVLLALAVGTFVGGQEFSNMLIDAAS 62
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ A + + + +I L + S L I+ Y+
Sbjct: 63 RFLSDEGATVLDRTLQNTSGTAGASVVSIVIL--LWSSLKLFRGLVIAFEEVYQTFPDVG 120
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ + + +M V + +L F A+ + L++ ++
Sbjct: 121 IVEQVKKGLATLVAVVLGVALMVVVGTVLGSSLVTSIPFVGAIASSGLLLGLVFVFLP-- 178
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ LP K + LPG +F + W+V F +++ Y L
Sbjct: 179 --------LYYVLPPVKMSLREALPGTLFAALGWLVLQAGFQYFLGGSGKYGLT-GILGV 229
Query: 248 IMTCLVFLYMLGVFFILGAELN 269
I+ L +LY GV ++GA +N
Sbjct: 230 IIVFLTWLYFAGVILLVGAVVN 251
>gi|71281439|ref|YP_267359.1| ribonuclease BN [Colwellia psychrerythraea 34H]
gi|81175003|sp|Q489A5|Y609_COLP3 RecName: Full=UPF0761 membrane protein CPS_0609
gi|71147179|gb|AAZ27652.1| ribonuclease BN [Colwellia psychrerythraea 34H]
Length = 303
Score = 98.8 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 104/273 (38%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFG 68
++++ E +A ++S L+S+ P IV ++ + I+ V+
Sbjct: 22 ELLFYFTRRVRREQIQVVAGYLSYVCLMSLVPLIVVMLSVMTAFPLFAELQQSIEQFVYQ 81
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + +A +K + ++ + + ++ + N+ +RV + R
Sbjct: 82 NFVPAAGDVVQQYLTGFVANASK-MSAVAISFLFLAALLLISSIDNTFNKIWRVTDKRRT 140
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + + + L + + + + +A L ++ L +L+
Sbjct: 141 ITSFAMYWMVLTLGPILVGASIALSSYLVSIVAVDEYDVLGLSDMFL------RMLPLLS 194
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I I +++ +P L G I + + + F YI F +Y +Y LA+I
Sbjct: 195 SIIAFIILYIAVPNKAVPFRFALSGAIVAGVLFELAKKAFALYITAFPSYQVIYGALATI 254
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+++Y+ + + GA + S+ Y K+
Sbjct: 255 PIIFLWVYVSWIIVLTGALITVSLQEYEILKEK 287
>gi|318058337|ref|ZP_07977060.1| putative ribonuclease BN [Streptomyces sp. SA3_actG]
gi|318078574|ref|ZP_07985906.1| putative ribonuclease BN [Streptomyces sp. SA3_actF]
Length = 317
Score = 98.8 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 93/273 (34%), Gaps = 6/273 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG+ A ++L +L+V P ++ L+ L +
Sbjct: 33 WQLVRDSFVRFRYADGFTNARALALQTVLAVIPLVIAFVGLSTSLHTENLGRLAQLTIHS 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG---LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + G A+ + + + + NR Y
Sbjct: 93 VAARPSTEVVDEALERGEYAAGDGDEIALWFGAIFSLVNVTTAMCQIERGANRIYGNERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYA 184
R +++ L A + L + V +A + LG+ +W R
Sbjct: 153 RPFHLKYGRGLVMALTAGIPLGLGFVVMIAGGDLAGAATTVY-GLGDHARTVWEYARWPV 211
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L I V P K + L G W + L + Y+ ++ T+Y
Sbjct: 212 GLLLALIAASVVFRSAPRRKQPGYTWLAFGAGVYLSLWTLLTWLLSLYLRLSGSFDTVYG 271
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L++ M+ L++ Y+ V LG A +
Sbjct: 272 PLSAFMSLLLWAYLTSVALFLGLSFAAQLEASR 304
>gi|269140831|ref|YP_003297532.1| ribonuclease BN [Edwardsiella tarda EIB202]
gi|267986492|gb|ACY86321.1| ribonuclease BN [Edwardsiella tarda EIB202]
gi|304560591|gb|ADM43255.1| Ribonuclease BN [Edwardsiella tarda FL6-60]
Length = 292
Score = 98.8 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 99/267 (37%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
+ ++ +A ++ +LLS+ P I +L V + +F +
Sbjct: 19 LWQRVDDDRMTMVAGSLAYVSLLSLVPLITVVFSLFTAFPMFASVSFQLKHFIFTNFVPA 78
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + Q +A +K + + + + + ++ +LN +R R+ +
Sbjct: 79 AGDVVQSYLEQFVANSSK-MTALGTIGLIVTALLLISSVDGALNHIWRSERKRAVVYSFA 137
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + +L LV S L+L ++ + ++ +L +
Sbjct: 138 V-YWMILTLGPLLVGASMAISTYLLSLRWLAD-----SAVYSMVDQLLRLFPLLLSCVSF 191
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + + L G + + +G F YI F +Y +Y LA I V
Sbjct: 192 WLLYCIVPTQRVPMRDALIGAVVAGGLFELGKKAFALYITAFPSYQLIYGVLAVIPMLFV 251
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ + ++
Sbjct: 252 WVYWSWCIVLLGAEVTVAIGDFRAHRR 278
>gi|22127672|ref|NP_671095.1| ribonuclease BN [Yersinia pestis KIM 10]
gi|45439894|ref|NP_991433.1| ribonuclease BN [Yersinia pestis biovar Microtus str. 91001]
gi|108809505|ref|YP_653421.1| ribonuclease BN [Yersinia pestis Antiqua]
gi|108810420|ref|YP_646187.1| ribonuclease BN [Yersinia pestis Nepal516]
gi|145601117|ref|YP_001165193.1| ribonuclease BN [Yersinia pestis Pestoides F]
gi|270488037|ref|ZP_06205111.1| YihY family protein [Yersinia pestis KIM D27]
gi|294502136|ref|YP_003566198.1| ribonuclease BN [Yersinia pestis Z176003]
gi|21960787|gb|AAM87346.1|AE013982_13 tRNA processing exoribonuclease BN [Yersinia pestis KIM 10]
gi|45434749|gb|AAS60310.1| ribonuclease BN [Yersinia pestis biovar Microtus str. 91001]
gi|108774068|gb|ABG16587.1| tRNA-processing RNAse BN [Yersinia pestis Nepal516]
gi|108781418|gb|ABG15476.1| tRNA-processing RNAse BN [Yersinia pestis Antiqua]
gi|145212813|gb|ABP42220.1| tRNA-processing RNAse BN [Yersinia pestis Pestoides F]
gi|270336541|gb|EFA47318.1| YihY family protein [Yersinia pestis KIM D27]
gi|294352595|gb|ADE62936.1| ribonuclease BN [Yersinia pestis Z176003]
Length = 314
Score = 98.8 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 43 LYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFAEISIKLKAFIFANFMPA 102
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 103 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKIQRSLVFSFA 161
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ Y ++ ++ +++ V L+ + +++ I +L ++
Sbjct: 162 V---YWMVLTLGPILVGASMVISSYLLSLHWLAHARVDSMIDEI---LRVFPLLISWVSF 215
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G F YI F +Y +Y LA I +
Sbjct: 216 WLLYSVVPTVRVPARDALIGALVAALLFELGKKGFAMYITLFPSYQLIYGVLAVIPILFL 275
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y +
Sbjct: 276 WVYWSWCIVLLGAEITVTLGEYRAERH 302
>gi|53805091|ref|YP_113221.1| ribonuclease BN [Methylococcus capsulatus str. Bath]
gi|53758852|gb|AAU93143.1| putative ribonuclease BN [Methylococcus capsulatus str. Bath]
Length = 422
Score = 98.8 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 91/266 (34%), Gaps = 7/266 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R +V A + ++LL++ P + ++ GAH +
Sbjct: 17 RRGLTLVLRCAVALAGEIRAGGLDYRAMSLVYTSLLALIPLLAVAFSVLKAFGAHTGLEP 76
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + + I V + L + L Y S ++ + S N +R
Sbjct: 77 LLSELLDPLGANAEQVKDAIIDSVKRMKVGVLGFLGFLFLFYVSITMLDKIEESFNHVWR 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R+ + + L+ + L+ + G+
Sbjct: 137 TRTSRNLWRRLGDYLSFTLVGPLLLLSAFGSMTG-------LLGRHSGRGSAGWAWSLAE 189
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A+ + + +P+A+ K+ S L G + W + +F ++ S Y +
Sbjct: 190 HVLPYAAIILAFTLFYWVIPSARVKLRSALFGGVVAGAMWELAGWVFGEFVAGSSQYHAV 249
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAE 267
Y+ A ++ +V+LY+ + +LGA+
Sbjct: 250 YSSFAILVLFMVWLYVSWLIVLLGAQ 275
>gi|114776998|ref|ZP_01452018.1| Ribonuclease BN [Mariprofundus ferrooxydans PV-1]
gi|114552519|gb|EAU54979.1| Ribonuclease BN [Mariprofundus ferrooxydans PV-1]
Length = 460
Score = 98.8 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 103/264 (39%), Gaps = 2/264 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + + + F+E + + + LLS+ P + ++ G +
Sbjct: 34 KVLLTRMLQVSFAVVRDFLEGQLTLRSMSLVYTTLLSLVPLLALTFSVLKGFGVQNQLEP 93
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ A + + + V + L ++ Y + + + S N +
Sbjct: 94 MLVNTLSALGDKGEEIARQIVGFVDNIKVGVLGSLGLGMLIYTVISLLHKIEKSFNYIWH 153
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R + + S ++ L+I S + + L + V + ++ L L++ +
Sbjct: 154 IEQARP--LGQRFSEYLSVILVGPLLIFSALGMTASLMNSNVVEALASMPLLGLVVHSIG 211
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + FV++F+P + KI L G ++W F ++ Y+ +
Sbjct: 212 KLIPYALVIVAFTFVYIFMPNTRVKIGPALIGGTVAGVAWETAGWAFGAFVANSGNYTAI 271
Query: 242 YAGLASIMTCLVFLYMLGVFFILG 265
Y+G A ++ +++L++ + +LG
Sbjct: 272 YSGFAILIMFMIWLFISWLILLLG 295
>gi|53729034|ref|ZP_00134316.2| COG1295: Predicted membrane protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209408|ref|YP_001054633.1| ribonuclease BN [Actinobacillus pleuropneumoniae L20]
gi|165977396|ref|YP_001652989.1| ribonuclease BN [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|303250333|ref|ZP_07336532.1| ribonuclease BN [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|303251726|ref|ZP_07337897.1| ribonuclease BN [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307249026|ref|ZP_07531034.1| hypothetical protein appser2_19870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307253642|ref|ZP_07535509.1| hypothetical protein appser6_21320 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|288559227|sp|A3N3P2|Y1950_ACTP2 RecName: Full=UPF0761 membrane protein APL_1950
gi|126098200|gb|ABN75028.1| tRNA-processing ribonuclease BN (RNase BN) [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165877497|gb|ABY70545.1| tRNA-processing ribonuclease BN [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302649156|gb|EFL79341.1| ribonuclease BN [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|302650803|gb|EFL80960.1| ribonuclease BN [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306854484|gb|EFM86679.1| hypothetical protein appser2_19870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306858878|gb|EFM90924.1| hypothetical protein appser6_21320 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 276
Score = 98.8 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 111/272 (40%), Gaps = 10/272 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGA 69
I ++H+ + A +++ S L++ P ++ ++ Q + +++
Sbjct: 8 FIKLLLKHWKIHNIPVSAGYLTYSTTLAIVPLVMVVFSIFTAFPIFQEATEQLKTLIYDN 67
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + I + +K + +S + + ++++ +LN+ +R RS +
Sbjct: 68 FAPNAGDMVEEYI-DLFVANSKKMGIVSTIGLVVVALMLIQSIDETLNKMWRNHRKRSIF 126
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN-LLLIIWNGRIYATMLA 188
I+ LL +V L I + +Y+ N LL Y L
Sbjct: 127 IS-------FLLYAVILFIAPLLAGGSIAISSYIFSMAIFNENGLLSFSQQLLQYTPFLL 179
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+++ V+ +P K I+ + G I I + +G F YI TF +Y +Y LA +
Sbjct: 180 IWLLFTTVYWLVPNTKVNILHAMLGAIVAAIFFTLGKQAFVWYISTFPSYQAIYGALAVL 239
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ + G + +++ +Y KK
Sbjct: 240 PIMLLWIHLSWQVVLFGGLITSTLNVYNEMKK 271
>gi|67920991|ref|ZP_00514510.1| Ribonuclease BN [Crocosphaera watsonii WH 8501]
gi|67857108|gb|EAM52348.1| Ribonuclease BN [Crocosphaera watsonii WH 8501]
Length = 308
Score = 98.8 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/290 (15%), Positives = 111/290 (38%), Gaps = 18/290 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + + + ++D M + +S A+ S+FP ++ ++ GF+ ++ +
Sbjct: 14 IIQLFTGTLIKWQQDDCIEMGAALSYYAIFSLFPILLVILSITGFILGPDTNAYTQILIL 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A+P + +LQ L + G I +S AL +N+ ++V
Sbjct: 74 AKTAFPIEAYHIVETTLLQ-LNTSSLGAGIIGFSILFITASRIFLALSRDVNKIWKVYHR 132
Query: 126 R-----------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--- 171
+ ++ ++I+F VL ++ +++ +A+ + ++ +
Sbjct: 133 QYSQNGWFWTVITFIKNQIIAFLLVLSSTALMLVSLLSNIALKVFFKIIQNVENVITWVR 192
Query: 172 -NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+ + ++ T L ++F++ LPA K K I G + + + +
Sbjct: 193 LDEASLWNTLQLGVTYFLLTSVVMFLYKTLPATKVKWSDIWIGALLAVSLFSLLQSSVSS 252
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ Y + M L+++++ F+LG E + +K
Sbjct: 253 GVIRIGEQFRAYGIIGGFMVLLLWIFLTCQIFLLGCEFTYVYTHLFGSRK 302
>gi|256545458|ref|ZP_05472820.1| hypothetical protein HMPREF0078_1077 [Anaerococcus vaginalis ATCC
51170]
gi|256398854|gb|EEU12469.1| hypothetical protein HMPREF0078_1077 [Anaerococcus vaginalis ATCC
51170]
Length = 293
Score = 98.8 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 12/278 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ IE D +AS +S L + P ++ NL VI
Sbjct: 13 FIFTLIERAKSHDIMTLASSLSYYFLSAAIPMLLVLLNLVTKYMKGN--EDVIVEFIELL 70
Query: 71 PEVIAKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE I I + ++ + L TI+ + A + +S GV + +++N AY + + S
Sbjct: 71 PETIRGVILMLVKSIINSSSVSTLSTITLIFALWSASKGVSKIILAINVAYGLEDDHSMI 130
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA------LGNLLLIIWNGRIY 183
++ F Y + L+ + + + L + L +I
Sbjct: 131 KNKIFGFLYTFILIFILIFLFLLRIYSNGILNLIENVLQLVNSSFSLEEFTWLINLVSGI 190
Query: 184 ATMLALFIGLIFVHLFLP---AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L +GL ++ P + K G I T I + + ++ ++ S S
Sbjct: 191 LPPIILILGLSLLYKCAPYNNSIKISFKDAFVGSISTTIMITITSFAYSFFLNNMSNMSV 250
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+Y LA I+ LV++ + + ILGAE+ A+ + +
Sbjct: 251 IYGALAGIIALLVWMLLFSLTIILGAEIIAAYMKTKNK 288
>gi|84625563|ref|YP_452935.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84369503|dbj|BAE70661.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 299
Score = 98.4 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 19/274 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F+E D A+ +S ALLS+ P +V L L ++ V
Sbjct: 3 LLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQVAQLAGGSA 61
Query: 75 AKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMR-----S 127
A+ I P G S L ++ L+ +LN +R + R +
Sbjct: 62 AEVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLIFRTDKERLDGLMA 121
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ SFG +L L++ A+ + A + PA+G T+
Sbjct: 122 WLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG----------YVTTLA 171
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ F++ +LP G + T + + +G YI T + S Y + +
Sbjct: 172 LYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGRYAIGVYIATAAPGSA-YGSMGT 230
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ LV++Y V F +GA + A + +
Sbjct: 231 LVILLVWMYYASVVFFVGALITAVIDERVRSHRK 264
>gi|153833927|ref|ZP_01986594.1| tRNA-processing ribonuclease BN [Vibrio harveyi HY01]
gi|148869765|gb|EDL68742.1| tRNA-processing ribonuclease BN [Vibrio harveyi HY01]
Length = 299
Score = 98.4 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 93/259 (35%), Gaps = 8/259 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ + A +++ LLS+ P + ++ + V + + +
Sbjct: 11 LLKRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFENVGETLQGYIIDNFVPA 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + ++ + + + + + +LN +RV + R +
Sbjct: 71 SGDAVRTALQEFVSN-TGKMTAVGGAFLFVAALMLISNIDKNLNYIWRVKDKRRPVFSFS 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S + +L + L + +L F
Sbjct: 130 M-YWMVLTLGPILVGASIAATSYVTSLKLIEN-----ETLSGAYNLFLRWLPLLLSFFAF 183
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ ++ +P K + G + + + F YI F +Y +Y LA+I V
Sbjct: 184 MGLYFLVPNKKVYLSHGAIGAAIAAVLFELSKKGFAFYITQFPSYQLIYGALAAIPILFV 243
Query: 254 FLYMLGVFFILGAELNASM 272
++Y+ + ++GAE+ A++
Sbjct: 244 WVYLCWLIVLIGAEVTAAL 262
>gi|329123698|ref|ZP_08252258.1| tRNA-processing ribonuclease BN [Haemophilus aegyptius ATCC 11116]
gi|327469897|gb|EGF15362.1| tRNA-processing ribonuclease BN [Haemophilus aegyptius ATCC 11116]
Length = 269
Score = 98.4 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 105/260 (40%), Gaps = 10/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
+ F E +A ++ S +L++ P ++ ++ ++ + +++F +
Sbjct: 11 FWKRFSENKLNQVAGALTYSTMLAIVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + I Q ++ +K + + ++ + + + +LN + + RS +
Sbjct: 71 ASDMVGEYIDQFVSN-SKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFA 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + + L + + + + I + L + L +
Sbjct: 130 IYWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGL--------KLLSFVPFLFTWFIF 181
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L+
Sbjct: 182 TLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLL 241
Query: 254 FLYMLGVFFILGAELNASMI 273
++ + + ++GA+L +++
Sbjct: 242 WIQISWLVVLVGAQLASTLD 261
>gi|261342955|ref|ZP_05970813.1| hypothetical protein ENTCAN_09555 [Enterobacter cancerogenus ATCC
35316]
gi|288314704|gb|EFC53642.1| tRNA-processing ribonuclease BN (RNase BN) [Enterobacter
cancerogenus ATCC 35316]
Length = 293
Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 102/270 (37%), Gaps = 10/270 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ E++ +A +++ +LLS+ P + L V + VF +
Sbjct: 20 LKLLWHRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFSAFPMFSDVSLQLRHFVFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I + I Q +A +K + + A + + ++ +LN +R ++R
Sbjct: 80 IPATGDVIQNYIEQFVANSSK-MTAVGACGLIVTALLLMYSIDSALNAIWRSKKVRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N ++ +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRIFPLILSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ +P + + G + + + +G F YI F +Y +Y LA I
Sbjct: 191 LSFWLLYSVVPTTRVPNRDAVVGALVAAVLFELGKKGFALYITMFPSYQLIYGVLAVIPI 250
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ ++ +Y K+
Sbjct: 251 LFVWVYWTWCIVLLGAEITVTLGVYRELKQ 280
>gi|15807590|ref|NP_296328.1| brkB protein [Deinococcus radiodurans R1]
gi|6460437|gb|AAF12146.1|AE002090_2 brkB protein, putative [Deinococcus radiodurans R1]
Length = 419
Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 106/276 (38%), Gaps = 23/276 (8%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI---- 63
+F +I D+ + F ++ +A+ IS + S+ P ++F +AGF + V +
Sbjct: 28 LFGLIGDSAKAFGQDKAPRLAAAISYYGISSLAPLLLFAVAVAGFFLSDAKVVDQLFGPQ 87
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYR 121
V + A + + + + I+ + ++ L+ +LN +
Sbjct: 88 GSVAQSVGGDAADFLRGLVSNQKGLQRGSVIATLIAFVVTFMGATGLFVQLQDALNSMWG 147
Query: 122 VVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-- 174
TRLISF V ++ + V + ++ +LG+ L
Sbjct: 148 ADPAPPQGIGKIVKTRLISF-------VLILAIGLVLLLFLALNTWLSALAHSLGDSLGV 200
Query: 175 --LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+++ G + L L + FLPA K + +L G T + + +G +L Y
Sbjct: 201 GAVLVRVGTFVLSALLLTPVFAAIFKFLPAVKLEWREVLVGGAVTAVLFSIGQILIGIYF 260
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ S + ++ L ++Y + F GAEL
Sbjct: 261 GRAAPGSA-FGAAGVLVALLAWIYYSAMIFFFGAEL 295
>gi|292654417|ref|YP_003534314.1| ribonuclease BN [Haloferax volcanii DS2]
gi|291370911|gb|ADE03138.1| ribonuclease BN [Haloferax volcanii DS2]
Length = 445
Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 93/273 (34%), Gaps = 18/273 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++ E++ +A+ IS AL+S+ P +V G +A +G
Sbjct: 1 MSANIRTAVPVARAVVDTIREKEISFLAASISYYALVSLIPLLVLGVVVATAVGGAALQA 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +V + + + + G + + + L I+ +R Y
Sbjct: 61 QLQTLVEQYLVPTGQGLVEEALSDRTGQGSVGAVGLG--LTVWGALKLFRGLDIAFSRIY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + + T+ + + L + +++ P L L L
Sbjct: 119 GSEAGGLLDQLRDGAIALASIGVGTIGVAVLTALLGLLDVPFLQLLSPLLLLLTL----- 173
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ P A ++PG +F + W + V F Y ++
Sbjct: 174 ---------CAAFFPLYYVFPDADLSPRQVVPGTVFAAVGWTLLGVGFGIYASVAG--AS 222
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ L +++ + + Y G+ I GA +NA +
Sbjct: 223 VAGALGTLLLLVTWFYFSGLILISGAVVNAVLA 255
>gi|218962155|ref|YP_001741930.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
gi|167730812|emb|CAO81724.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
Length = 359
Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 116/273 (42%), Gaps = 11/273 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ F ++ I + F+ E ++ ++ LL PFI F +A L
Sbjct: 43 KKVFSNIWTFIKTFYQRFMGEGILKESASLTYITLLGFVPFINFLVLIAPDLPFLNLGDK 102
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++V + A I + + +++ +P G + + S + +R + +R
Sbjct: 103 LRELVVQNFIPSSANAIINFLDKLI-MPKVGFNIFNFVILIVSSYSLFSVIRGTFDRILS 161
Query: 122 VVEMRSW-YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ S IT+L+ F ++ + ++++ F +IP+ ++ ++
Sbjct: 162 MQLKSSQDTITQLVKFFGTIVFGLLIIVLLFSSSSIPIISRLLKS---------PVLQWI 212
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + F+ ++F+++ LP+ + S+ G +T + WV+G F YI + Y
Sbjct: 213 MVIVPFVLQFLAIMFLYMLLPSVRINRASLFRGAFWTTVIWVIGKSAFDFYIYNLTNYER 272
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y +A + L+++Y+ + G L + M
Sbjct: 273 LYGVMAVLPIFLLWIYINWAIILGGMVLVSEME 305
>gi|119947084|ref|YP_944764.1| ribonuclease BN [Psychromonas ingrahamii 37]
gi|288559236|sp|A1T0A0|Y3482_PSYIN RecName: Full=UPF0761 membrane protein Ping_3482
gi|119865688|gb|ABM05165.1| tRNA-processing RNAse BN [Psychromonas ingrahamii 37]
Length = 292
Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 106/275 (38%), Gaps = 12/275 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + + + +++ A H++ LLS+ P + + + +
Sbjct: 10 DKVKVTYQYLLFVWRRSEQDNIKVPAGHLAYVTLLSIVPLLAVIFYMLAAFPVFSDLKGM 69
Query: 63 I-DVVFGAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAY 120
+ D+++ I + I + K + I +L A + + + ++NR +
Sbjct: 70 LEDLIYNNLLPTSGDTIQEHISGFIENTKKMSMMGIGSLIAI--ALLLISTIDQTINRIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R RS + + + +L+ ++I + + ++ L + + G LL +
Sbjct: 128 RCTNKRSRIQS--FTIYWTILSLGPVIIGASLALSSYLFSVFQEHGSLSFGQRLLSL--- 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ V+ +P + L G + I + G LF YI F +
Sbjct: 183 ---MPFILTWLTFAGVYTLVPHQRVSFRYALIGGLIAAILFFFGTDLFRLYITNFPSQQI 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA I V++Y + ++GAE+ A++ +
Sbjct: 240 IYGALAVIPILFVWIYYSWLIVLIGAEVTATLEEF 274
>gi|163802228|ref|ZP_02196123.1| ribonuclease BN [Vibrio sp. AND4]
gi|159174033|gb|EDP58843.1| ribonuclease BN [Vibrio sp. AND4]
Length = 314
Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 93/259 (35%), Gaps = 8/259 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ + A +++ LLS+ P + ++ + V + V +
Sbjct: 26 LLKRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFENVGETLQGYVIDNFVPA 85
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + ++ + + + + + +LN +RV + R +
Sbjct: 86 AGDAVRTALQEFVSN-TGKMTAVGGAFLFVAALMLISNIDKNLNYIWRVKDKRLPVFSFS 144
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S + +L + L + +L F
Sbjct: 145 M-YWMVLTLGPILVGASIAATSYVTSLKLMEN-----ETLSGAYDLFLRWLPLLLSFFAF 198
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ ++ +P K + G + + + F YI F +Y +Y LA+I V
Sbjct: 199 MGLYFLVPNKKVYLSHGAIGAAIAAVLFELSKKGFAFYITQFPSYQLIYGALAAIPILFV 258
Query: 254 FLYMLGVFFILGAELNASM 272
++Y+ + ++GAE+ A++
Sbjct: 259 WVYLCWLIVLIGAEVTAAL 277
>gi|16272234|ref|NP_438445.1| ribonuclease BN [Haemophilus influenzae Rd KW20]
gi|145632520|ref|ZP_01788254.1| ribonuclease BN [Haemophilus influenzae 3655]
gi|145635184|ref|ZP_01790889.1| ribonuclease BN [Haemophilus influenzae PittAA]
gi|148825444|ref|YP_001290197.1| ribonuclease BN [Haemophilus influenzae PittEE]
gi|148827430|ref|YP_001292183.1| ribonuclease BN [Haemophilus influenzae PittGG]
gi|229844979|ref|ZP_04465116.1| ribonuclease BN [Haemophilus influenzae 6P18H1]
gi|229846364|ref|ZP_04466472.1| ribonuclease BN [Haemophilus influenzae 7P49H1]
gi|260580841|ref|ZP_05848666.1| tRNA-processing ribonuclease BN [Haemophilus influenzae RdAW]
gi|260583351|ref|ZP_05851123.1| tRNA-processing ribonuclease BN [Haemophilus influenzae NT127]
gi|1176326|sp|P44608|Y276_HAEIN RecName: Full=UPF0761 membrane protein HI_0276
gi|166199579|sp|A5UAL3|Y1670_HAEIE RecName: Full=UPF0761 membrane protein CGSHiEE_01670
gi|166199580|sp|A5UG94|Y4180_HAEIG RecName: Full=UPF0761 membrane protein CGSHiGG_04180
gi|1573242|gb|AAC21941.1| ribonuclease BN (rbn) [Haemophilus influenzae Rd KW20]
gi|144986715|gb|EDJ93267.1| ribonuclease BN [Haemophilus influenzae 3655]
gi|145267605|gb|EDK07604.1| ribonuclease BN [Haemophilus influenzae PittAA]
gi|148715604|gb|ABQ97814.1| ribonuclease BN [Haemophilus influenzae PittEE]
gi|148718672|gb|ABQ99799.1| ribonuclease BN [Haemophilus influenzae PittGG]
gi|229810457|gb|EEP46175.1| ribonuclease BN [Haemophilus influenzae 7P49H1]
gi|229812113|gb|EEP47805.1| ribonuclease BN [Haemophilus influenzae 6P18H1]
gi|260092464|gb|EEW76402.1| tRNA-processing ribonuclease BN [Haemophilus influenzae RdAW]
gi|260093585|gb|EEW77501.1| tRNA-processing ribonuclease BN [Haemophilus influenzae NT127]
gi|301168986|emb|CBW28583.1| predicted inner membrane protein [Haemophilus influenzae 10810]
gi|309972563|gb|ADO95764.1| tRNA processing exoribonuclease BN [Haemophilus influenzae R2846]
Length = 269
Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 105/260 (40%), Gaps = 10/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
+ F E +A ++ S +L++ P ++ ++ ++ + +++F +
Sbjct: 11 FWKRFSENKLNQVAGALTYSTMLAMVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + I Q ++ +K + + ++ + + + +LN + + RS +
Sbjct: 71 ASDMVGEYIDQFVSN-SKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFA 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + + L + + + + I + L + L +
Sbjct: 130 IYWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGL--------KLLSFVPFLFTWFIF 181
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L+
Sbjct: 182 TLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLL 241
Query: 254 FLYMLGVFFILGAELNASMI 273
++ + + ++GA+L +++
Sbjct: 242 WIQISWLVVLVGAQLASTLD 261
>gi|307246888|ref|ZP_07528953.1| hypothetical protein appser1_20780 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255870|ref|ZP_07537671.1| hypothetical protein appser9_20910 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260323|ref|ZP_07542030.1| hypothetical protein appser11_21040 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852173|gb|EFM84413.1| hypothetical protein appser1_20780 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861138|gb|EFM93131.1| hypothetical protein appser9_20910 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865574|gb|EFM97455.1| hypothetical protein appser11_21040 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 274
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 110/272 (40%), Gaps = 10/272 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGA 69
I ++ + + A +++ S L++ P ++ ++ Q + +++
Sbjct: 6 FIKLLLKRWKIHNIPVSAGYLTYSTTLAIVPLVMVVFSIFTAFPIFQEATEQLKTLIYDN 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + I + +K + +S + + ++++ +LN+ +R RS +
Sbjct: 66 FAPNAGDMVEEYI-DLFVANSKKMGIVSTIGLVVVALMLIQSIDETLNKMWRNHRKRSIF 124
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN-LLLIIWNGRIYATMLA 188
I+ LL +V L I + +Y+ N LL Y L
Sbjct: 125 IS-------FLLYTVILFIAPLLAGGSIAISSYIFSMAIFNENGLLSFSQQLLQYTPFLL 177
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+++ V+ +P K I+ + G I I + +G F YI TF +Y +Y LA +
Sbjct: 178 IWLLFTTVYWLVPNTKVNILHAMLGAIVAAIFFTLGKQAFVWYISTFPSYQAIYGALAVL 237
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ + G + +++ +Y KK
Sbjct: 238 PIMLLWIHLSWQVVLFGGLITSTLNVYNEMKK 269
>gi|239814770|ref|YP_002943680.1| ribonuclease BN [Variovorax paradoxus S110]
gi|239801347|gb|ACS18414.1| ribonuclease BN [Variovorax paradoxus S110]
Length = 313
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 107/274 (39%), Gaps = 6/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF-GANLAGFLGAHQFVPTVI 63
++DA++ F G +A ++ ALLS+ P ++ ++ + + + T+
Sbjct: 14 LRHPLRFVWDALKAFRANQGLLLAGAVAYYALLSIVPLLIVSVIAMSHLIEQAELLRTIG 73
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P +K I E+ L + + + +FSS L ++ +
Sbjct: 74 RYLEWLLPGQ-SKAIVAELSNFL-QHRDVMGPVLFVTMIFFSSLAFSVLESAMAVIFHHR 131
Query: 124 E---MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R + ++ ++ + Y+L V L++++ V A+ L F +L +
Sbjct: 132 KADHRRHFLVSAVMPYLYILFLCVGLLLVTLVSGALQLVGQESVDLFGRNWSLSGVSGLL 191
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L ++L +PA + + L G + + W + Y T S +
Sbjct: 192 LYLLGLGGEIFMLTSLYLVMPAGRMSLRHALLGGVTAALLWEATRRVLIWYFSTLSQVNV 251
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y L + + L+ L + +LGA++ A
Sbjct: 252 VYGSLTTAIVVLLSLEIAATLVLLGAQVIAQYER 285
>gi|145631047|ref|ZP_01786822.1| ribonuclease BN [Haemophilus influenzae R3021]
gi|145637845|ref|ZP_01793492.1| ribonuclease BN [Haemophilus influenzae PittHH]
gi|144983332|gb|EDJ90814.1| ribonuclease BN [Haemophilus influenzae R3021]
gi|145268947|gb|EDK08903.1| ribonuclease BN [Haemophilus influenzae PittHH]
Length = 269
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 105/260 (40%), Gaps = 10/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
+ F E +A ++ S +L++ P ++ ++ ++ + +++F +
Sbjct: 11 FWKRFSENKLNQVAGALTYSTMLAMVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + I Q ++ +K + + ++ + + + +LN + + RS +
Sbjct: 71 ASDMVGEYIDQFVSN-SKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFA 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + + L + + + + I + L + L +
Sbjct: 130 IYWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGL--------KLLSFVPFLFTWFIF 181
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L+
Sbjct: 182 TLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLL 241
Query: 254 FLYMLGVFFILGAELNASMI 273
++ + + ++GA+L +++
Sbjct: 242 WIQISWLVVLVGAQLASTLD 261
>gi|190151307|ref|YP_001969832.1| tRNA-processing ribonuclease BN (RNase BN) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307264660|ref|ZP_07546240.1| hypothetical protein appser13_20450 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189916438|gb|ACE62690.1| tRNA-processing ribonuclease BN (RNase BN) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306869972|gb|EFN01736.1| hypothetical protein appser13_20450 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 274
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 110/272 (40%), Gaps = 10/272 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGA 69
I ++ + + A +++ S L++ P ++ ++ Q + +++
Sbjct: 6 FIKLLLKRWKIHNIPVSAGYLTYSTTLAIVPLVMVVFSIFTAFPIFQEATEQLKTLIYDN 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + I + +K + +S + + ++++ +LN+ +R RS +
Sbjct: 66 FAPNAGDMVEEYI-DLFVANSKKMGIVSTIGLVVVALMLIQSIDETLNKMWRNHRKRSIF 124
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN-LLLIIWNGRIYATMLA 188
I+ LL +V L I + +Y+ N LL Y L
Sbjct: 125 IS-------FLLYAVILFIAPLLAGGSIAISSYIFSMAIFNENGLLSFSQQLLQYTPFLL 177
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+++ V+ +P K I+ + G I I + +G F YI TF +Y +Y LA +
Sbjct: 178 IWLLFTTVYWLVPNTKVNILHAMLGAIVAAIFFTLGKQAFVWYISTFPSYQAIYGALAVL 237
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ + G + +++ +Y KK
Sbjct: 238 PIMLLWIHLSWQVVLFGGLITSTLNVYNEMKK 269
>gi|222480768|ref|YP_002567005.1| ribonuclease BN [Halorubrum lacusprofundi ATCC 49239]
gi|222453670|gb|ACM57935.1| ribonuclease BN [Halorubrum lacusprofundi ATCC 49239]
Length = 437
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 15/245 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D + ++ ++ +A+ I+ A +S+ P ++ +A + ++
Sbjct: 10 DTVRRVVDVAIDRQVTFLAAAIAYYAFVSLIPALLLLVVVATAVFGEAIAVELLAAAGDF 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + I A G I + + L + Y V E +
Sbjct: 70 LTPAGQEAVAGAISS--AGGRTGASVIGVAVLLWSTLKVFRGLDTAFAELYGVKEPPDFV 127
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ VL SV + V VAI +A +L++ L
Sbjct: 128 KQLADAASVVLAVSVGI----GVMVAIGAFVAAADVVPAVEAASILVL--------PAFL 175
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ LP + LPG + W + F Y + + +Y + I+
Sbjct: 176 AVVFLPMYYLLPEPDIGLREALPGAAIAAVGWTLLQAGFQVYAASAGQF-QVYGVIGGIL 234
Query: 250 TCLVF 254
+ +
Sbjct: 235 LLVTW 239
>gi|167840349|ref|ZP_02467033.1| YihY family protein [Burkholderia thailandensis MSMB43]
Length = 307
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCAAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + E R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLAIGASATFASLNTALSVIWPATETRASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ + I +
Sbjct: 142 LGLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVAIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 257 GSFAVLLMWLYFSAAVLLL 275
>gi|254447893|ref|ZP_05061358.1| ribonuclease BN [gamma proteobacterium HTCC5015]
gi|198262673|gb|EDY86953.1| ribonuclease BN [gamma proteobacterium HTCC5015]
Length = 445
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 106/262 (40%), Gaps = 9/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH--QFVPTVIDVVFGA 69
+Y I+ A + + LLS+ P + ++ G H Q P ++ +
Sbjct: 37 LYVLIDDIAGGQLTMRAMSLVYTTLLSIVPLLAVSFSVLKAFGVHNKQLEPLMLQFLEPL 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + IT +++ + G+ + Y + + V+ + + N +R+ E RS
Sbjct: 97 GQQGVE--ITSKVIGFIDNIDIGVLGVFGVVLLFYTAISLVQKIEATFNFVWRLQESRS- 153
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R +G V+L LV + + + + + + + ++ G L
Sbjct: 154 LGRRFTDYGSVMLIGPLLVFSAIGM-SAKVLNDEIVRSATEVALVGDLVNLGTRALPYLM 212
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS--TMYAGLA 246
+ F ++F+P + K+ + + + + W F +IV+ + S +Y+G A
Sbjct: 213 IMAAFSFFYVFIPNTRVKLKAGIIAGVISGFLWQSLGWAFGSFIVSSTDNSTYAIYSGFA 272
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ ++++Y+ + ++G +
Sbjct: 273 ILIIFMMWIYISWLILLIGGSI 294
>gi|115380143|ref|ZP_01467176.1| ribonuclease BN, putative [Stigmatella aurantiaca DW4/3-1]
gi|310823548|ref|YP_003955906.1| ribonuclease bn [Stigmatella aurantiaca DW4/3-1]
gi|115362848|gb|EAU62050.1| ribonuclease BN, putative [Stigmatella aurantiaca DW4/3-1]
gi|309396620|gb|ADO74079.1| Ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
Length = 456
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 107/273 (39%), Gaps = 10/273 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F F E+ A+ ++ ++ S+ P + G L L F + V
Sbjct: 37 IFLGARAVARDFQGENISLRAAALTYISVFSLVPLLTVGLALLQALHQEGFQRRMRSAVH 96
Query: 68 GAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A I + ++ + + L + + ++ +A + S + + + ++N + + R
Sbjct: 97 LALAPGIREESSEFLDRFLNPAHSIAIGSVGFVALLFSSGSLLRHIDGAVNEVWGIRRQR 156
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+TRL + +LL + SF + AL F A +L+ T
Sbjct: 157 P-LLTRLSIYLLLLLLGPIFLAASFSGTSAVRALIVNAGFSIAPQIVLVT--------TG 207
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L ++ P AK + S L G + + + W++ L+ + Y +Y L+
Sbjct: 208 LIAVSSLTLLYYGTPYAKVAVRSALAGGLVSGLGWILAKQLYEGFAEQTFRYDALYGSLS 267
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ ++Y+ + + GA L+ ++ +R
Sbjct: 268 ALPLFFAWIYVSWLIVLCGARLSYAVEHAAFRD 300
>gi|154251387|ref|YP_001412211.1| putative ribonuclease BN [Parvibaculum lavamentivorans DS-1]
gi|154155337|gb|ABS62554.1| putative ribonuclease BN [Parvibaculum lavamentivorans DS-1]
Length = 459
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/270 (15%), Positives = 99/270 (36%), Gaps = 6/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + I + A + + LL++ P + + G +V V+
Sbjct: 35 RIGWAVIRDLLSGALSLRAMSLVYTTLLAMVPALAIAFAIFRAFGFDSYVEAVLTDFLSP 94
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + V V L T+ Y + + + + N +RV RS
Sbjct: 95 LGDEGTQITLQMMEFVNRVNVNILGTVGFAFLLYTVVSLINKVEAAFNSIWRVEASRS-L 153
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + LV+ F +A L+ + + +I + R+ + +
Sbjct: 154 ARQFTEIVSMSVLGPLLVLTVFGIMAGALSNSAIGGLADNWLISYIIEQSSRLVPYAIVI 213
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F++ +P + ++ + L G + ++W F ++V + Y +Y+ AS++
Sbjct: 214 A-AFTFIYRMIPNTRVQMDAALVGGLVAGVTWGAAGWTFATFVVKSAQYVAIYSAFASLV 272
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++LY + + G S+ YY +
Sbjct: 273 FFMIWLYAAWIILLGG----CSIAFYYQNR 298
>gi|266625409|ref|ZP_06118344.1| YihY family protein [Clostridium hathewayi DSM 13479]
gi|288862689|gb|EFC94987.1| YihY family protein [Clostridium hathewayi DSM 13479]
Length = 121
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
FP + + + + R +L L I F++ ++P K LPG +F+ + W+
Sbjct: 1 EHHFPVIAEITHYVISFR-TVLLLILTICFTFLYTYVPEKKQHFKKQLPGAVFSTLGWIA 59
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ F+ Y FS +S MY L +I+ +++LY+ LGAE+N
Sbjct: 60 FSFAFSIYFNNFSNFSVMYGSLTAIVLLMLWLYVCICILFLGAEIN 105
>gi|297539635|ref|YP_003675404.1| cyclic nucleotide-binding protein [Methylotenera sp. 301]
gi|297258982|gb|ADI30827.1| cyclic nucleotide-binding protein [Methylotenera sp. 301]
Length = 435
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 108/274 (39%), Gaps = 7/274 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + ++++ F + +++ +S A+ ++ P ++ L L
Sbjct: 26 KQRYSTPLFVLHEMFGAFRRHNVLGLSASLSFYAMFALIPLVLLLFFLLSHLVFTSDYAV 85
Query: 62 V-IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + ++ G + I E+ A + + A+R S
Sbjct: 86 VKLAIITGNLAPKFSSAIMVEVYN-TAQQKAAWGAAGLFVLLWTVTPLASAMRTSFYTIA 144
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+VE S+ +L ++A + ++++ F+F L L V F A
Sbjct: 145 TLVEAPSYIHRKLKD----IIAVIGMLVLFFLFTFAGLMLEKVITFLGANHQFFQYDMIA 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + +L + F +F P + + IL G +FT + W++ FT ++ +Y +
Sbjct: 201 ALTSLVLTTLLIAAFYFVFFP-VRLNLKHILIGALFTAVLWLLMRPAFTLFLSLNESYGS 259
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++ + ++ + +LY F+LG EL A++
Sbjct: 260 VFGSMKNLFISITWLYFNFSVFLLGTELIATLRK 293
>gi|238921698|ref|YP_002935213.1| ribonuclease BN [Edwardsiella ictaluri 93-146]
gi|238871267|gb|ACR70978.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 292
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 99/267 (37%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
+ ++ +A ++ +LLS+ P I +L V + +F +
Sbjct: 19 LWQRVDDDRMTMVAGSLAYVSLLSLVPLITVVFSLFTAFPMFASVSFQLKRFIFTNFMPA 78
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + Q +A +K + + + + + ++ +LN +R R+ +
Sbjct: 79 AGDVVQSYLEQFVANSSK-MTALGTIGLIVTALLLISSVDGALNHIWRSERKRAVVYSFA 137
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + +L LV S L+L ++ + ++ +L +
Sbjct: 138 V-YWMILTLGPLLVGASMAISTYLLSLRWLAD-----SAVYSMVDQLLRLFPLLLSCVSF 191
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + + L G + + +G F YI F +Y +Y LA I V
Sbjct: 192 WLLYCIVPTQRVPMRDALVGAVVAGGLFELGKKAFALYITAFPSYQLIYGVLAVIPMLFV 251
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ + ++
Sbjct: 252 WVYWSWCIVLLGAEVTVAIGDFRAHRR 278
>gi|34540710|ref|NP_905189.1| ribonuclease BN [Porphyromonas gingivalis W83]
gi|34397024|gb|AAQ66088.1| ribonuclease BN, putative [Porphyromonas gingivalis W83]
Length = 411
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 105/272 (38%), Gaps = 9/272 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ I +F++ D AS ++ +LS+ P + +A G Q V D +
Sbjct: 5 FKSVFLTIRYFIQNDLATQASALTYRTILSIVPMLAVLIGIAKGFGIQQVVH---DWLKE 61
Query: 69 AWP--EVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + + LA G+F + + Y + + + + ++ +
Sbjct: 62 YLPGHQQELEQALGYVENYLAQVQGGIFVGVGLIVLLYTVFSLIATVEDTFTDIWQTNKR 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+W + G L + + S + + + + G +L +I N Y
Sbjct: 122 RTWKRRVIDYMGAFFLLPILITASSGLTLMMTTIKGTYFSEYILFGPMLELILNLIPYVI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF G+ ++ LP + + I + + L+ I+ S Y+ +Y
Sbjct: 182 IVLLFTGM---YIVLPTVNVRFWPAFISGVLAGIVFQIFQALYISGILWISKYNAIYGSF 238
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++ + + GA+L+ S+
Sbjct: 239 AAVPLLLLWIQLSWTIVLFGAQLSFSIQNVRK 270
>gi|322513797|ref|ZP_08066883.1| tRNA-processing ribonuclease BN [Actinobacillus ureae ATCC 25976]
gi|322120365|gb|EFX92295.1| tRNA-processing ribonuclease BN [Actinobacillus ureae ATCC 25976]
Length = 276
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/255 (15%), Positives = 99/255 (38%), Gaps = 8/255 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
+ + + A +++ S +L++ P I+ ++ F ++ D ++ +
Sbjct: 11 FFKRWQQNKIAISAGYLTYSTMLAIVPLIMVVFSVFTFFPIFHEATELLKDFIYDNFAPN 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + I ++ K + IS + + + ++ SLN + RS +I+ L
Sbjct: 71 AGHLVEEYIKLFVSNSEK-MGLISIVGLFVVAVMLISSIDQSLNDIWHNTRKRSIFISFL 129
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ Y L+ + +++ + + + Y +++
Sbjct: 130 L---YTLILIFAPIFAGMSIAISTYVMSFAVFSENGMLSFSHHL---LKYVPFCLIWLLF 183
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
FV+ +P + K G +F I + +G F Y+ TF +Y +Y LA + +V
Sbjct: 184 TFVYKIVPNTEVKGKHAAIGALFAAIFFTLGKQAFIWYVTTFPSYQAIYGALAVLPIMIV 243
Query: 254 FLYMLGVFFILGAEL 268
++++ +LG +
Sbjct: 244 WIHLSWQVVLLGGQF 258
>gi|319775853|ref|YP_004138341.1| trna-processing ribonuclease [Haemophilus influenzae F3047]
gi|319896611|ref|YP_004134804.1| tRNA-processing ribonuclease [Haemophilus influenzae F3031]
gi|317432113|emb|CBY80464.1| trna-processing ribonuclease [Haemophilus influenzae F3031]
gi|317450444|emb|CBY86660.1| trna-processing ribonuclease [Haemophilus influenzae F3047]
Length = 275
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 105/260 (40%), Gaps = 10/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
+ F E +A ++ S +L++ P ++ ++ ++ + +++F +
Sbjct: 17 FWKRFSENKLNQVAGALTYSTMLAIVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + I Q ++ +K + + ++ + + + +LN + + RS +
Sbjct: 77 ASDMVGEYIDQFVSN-SKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFA 135
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + + L + + + + I + L + L +
Sbjct: 136 IYWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGL--------KLLSFVPFLFTWFIF 187
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L+
Sbjct: 188 TLIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLL 247
Query: 254 FLYMLGVFFILGAELNASMI 273
++ + + ++GA+L +++
Sbjct: 248 WIQISWLVVLVGAQLASTLD 267
>gi|71274629|ref|ZP_00650917.1| Ribonuclease BN [Xylella fastidiosa Dixon]
gi|71899299|ref|ZP_00681460.1| Ribonuclease BN [Xylella fastidiosa Ann-1]
gi|170730894|ref|YP_001776327.1| ribonuclease BN [Xylella fastidiosa M12]
gi|71164361|gb|EAO14075.1| Ribonuclease BN [Xylella fastidiosa Dixon]
gi|71730925|gb|EAO32995.1| Ribonuclease BN [Xylella fastidiosa Ann-1]
gi|167965687|gb|ACA12697.1| ribonuclease BN [Xylella fastidiosa M12]
Length = 292
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 100/278 (35%), Gaps = 29/278 (10%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F E D A+ +S ALLS+ P +V L L T+I +
Sbjct: 26 LVNRFTEIDLLTQAASLSFYALLSLAPLLVLLLWLTASL-YPAAQATLITQIEQLAGNSA 84
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYF-------SSNGVEALRISLNRAYRVVEMR- 126
A + A P T LA + ++ L+ +LN + + R
Sbjct: 85 ATVAKTILQNATAQP-----TFGTLAGLWSTLLLFIGATAVFAQLQNALNLIFHTDQRRL 139
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+W R+ SFG VL L+I A+ + ++ P +G
Sbjct: 140 EGIKAWLKKRVFSFGVVLALGFLLIISMVATTALQVVFTHLPSMLPTIG----------Y 189
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+T++ + F++ +LP G T + +G YI T + S Y
Sbjct: 190 LSTLVLYTLAFAFLYRYLPDRTVNWRQAYIGGAITACLFTLGRYAIGLYISTAAPGSA-Y 248
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++ LV++Y V F +GA L A + K
Sbjct: 249 GSMGALVIMLVWMYYTSVVFFIGALLTAVIDERLRDHK 286
>gi|302342272|ref|YP_003806801.1| ribonuclease BN [Desulfarculus baarsii DSM 2075]
gi|301638885|gb|ADK84207.1| ribonuclease BN [Desulfarculus baarsii DSM 2075]
Length = 451
Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 106/263 (40%), Gaps = 11/263 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ Y ++ +F AS ++ LL + P + +LA LG + + F
Sbjct: 37 LQVAYLSVRNFFGRRLAFQASALTFITLLGLVPALAISFSLAKGLGFADAMRAALFNEFT 96
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL---RISLNRAYRVVEM 125
A + + ILQ + G + LAA S V AL + NR + V E
Sbjct: 97 ASQHQVMEY----ILQYVERTNMGALGVMGLAALIVS--LVLALSNAEDAFNRIWEVKET 150
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + R + +L L+I++ + +A ++ + + G
Sbjct: 151 RSLF--RKFTDYLSVLIICPLLIVAGTGIWAGMAAHGFVQWLMGQALIGEVAAMGLQLGP 208
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L L + +F+++FLP + +S + + T W + + + + Y+ +Y G
Sbjct: 209 VLMLAVAFVFMYMFLPNTRVPFVSAVIAGVVTAGLWWGVQHAYLQFQIGVARYNAIYGGF 268
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
A++ LV+L + + GAEL
Sbjct: 269 ATLPLFLVWLQVSWTVVLYGAEL 291
>gi|120612666|ref|YP_972344.1| ribonuclease BN [Acidovorax citrulli AAC00-1]
gi|120591130|gb|ABM34570.1| ribonuclease BN [Acidovorax citrulli AAC00-1]
Length = 316
Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 104/274 (37%), Gaps = 12/274 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + ++ A +V++ +M + +S ++ S+ P +V ++AG + +
Sbjct: 4 KNLKSSWALVKQAASSWVDDYAPSMGAALSYYSVFSLAPLLVIVISIAGLVFGEEAARGE 63
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAY 120
+ A +E+L A PA G+ + I ++ L+ +L+R +
Sbjct: 64 VFAQLSGLMGTDAAAAVEELLNAAARPATGVASAVIGLGVLLVGATTVFGELQDALDRIW 123
Query: 121 R--VVEM----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
R V E R +SFG +L + L++ + A+ + F L
Sbjct: 124 RAPVREGATGLWGLLRARFLSFGMILGIAFLLMVSLVMSAAVSALGKWWAPAFGGWEVLA 183
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + ++ +P + + G T + + VG +L YI
Sbjct: 184 QAINAA---VGFALTTVVFATIYKIMPRVSVRWHDVWLGAAITAVLFTVGRMLIGLYIGK 240
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ ++ + S++ V++Y F++GAE
Sbjct: 241 -TALASGFGAAGSLVVIFVWVYYSAQIFLMGAEF 273
>gi|238794554|ref|ZP_04638162.1| tRNA-processing ribonuclease BN [Yersinia intermedia ATCC 29909]
gi|238726134|gb|EEQ17680.1| tRNA-processing ribonuclease BN [Yersinia intermedia ATCC 29909]
Length = 273
Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 100/268 (37%), Gaps = 8/268 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P + L + + +F +
Sbjct: 2 LYARIDKDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPMFADISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKTQRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S V + L+L ++ + +I +L ++
Sbjct: 121 V-YWMVLTLGPILVGASMVISSYLLSLQWLAN-----AQVDSMIDEALRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDALIGALVAALLFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKKP 281
++Y +LGAE+ ++ Y ++
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYREQRHK 262
>gi|317405439|gb|EFV85751.1| BrkB transmembrane protein [Achromobacter xylosoxidans C54]
Length = 325
Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 105/276 (38%), Gaps = 9/276 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGA 69
++ D+ + + + ++L + S+ P ++ +AG F G + +
Sbjct: 28 LLMDSANQWSTHRASSKGAALALYMVFSLAPMLILVIAVAGAFFGEDAVRSELFSSLRDL 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
E A+ I + + IS + ++ L+ SL+ + V +
Sbjct: 88 TGERGAEVIQTVLASAHESGGGWIAALISIFVLIFSATTAFAELKASLDDLWEVSGNQKG 147
Query: 127 ---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+R++SFG VL+ ++ L+I V A+ A Y + A + W ++
Sbjct: 148 GIHGMVRSRVLSFGLVLVLALFLLISLTVNAALGAARKYYGDLWAASAVATVADWLSSLF 207
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + LP+A+ ++PG I T ++VG Y+ + Y
Sbjct: 208 -SFSVVVALFAVIFKLLPSARISWRDVIPGAIVTAALFLVGKWGIGVYLSR-GAAVSAYG 265
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ L+++Y F GA + + R+
Sbjct: 266 AAGSLIALLLWIYYSAQIFFFGAVFTRQFALRFGRE 301
>gi|110598225|ref|ZP_01386501.1| ribonuclease BN, putative [Chlorobium ferrooxidans DSM 13031]
gi|110340140|gb|EAT58639.1| ribonuclease BN, putative [Chlorobium ferrooxidans DSM 13031]
Length = 429
Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 94/255 (36%), Gaps = 9/255 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEV 73
++ + + + A ++ LLS+ PF+ ++ + + + + +
Sbjct: 33 FWKNLIHDRIFLGAGSLAFQTLLSIVPFLAVVLSILSVFAVFTPLKHNIEEFLVQNFMPG 92
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + A + + L + + + + +LN + V R +
Sbjct: 93 AGGILNHYLNDFIGKTAT-VPLLGGLFLFIIALSLISTIDHTLNEIWEVHSPRKMFQ--- 148
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
G+ L +V L + + + A +YV G +L + Y + +
Sbjct: 149 ---GFTLYWTV-LTLGPVLIGSSLAAGSYVWYTVFTEGPMLEVKTRLLSYLPFINSVVAF 204
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P + + + + G + + + F+ YI +T+ +Y L+ I
Sbjct: 205 FLLYMLVPNCRVRFLHAISGAFAAAVLFELSKKWFSFYIANVATFEHIYGALSVIPMLFF 264
Query: 254 FLYMLGVFFILGAEL 268
++Y+ V + GAE
Sbjct: 265 WIYLGWVVVLTGAEF 279
>gi|28199523|ref|NP_779837.1| ribonuclease BN [Xylella fastidiosa Temecula1]
gi|71898168|ref|ZP_00680354.1| Ribonuclease BN [Xylella fastidiosa Ann-1]
gi|182682256|ref|YP_001830416.1| ribonuclease BN [Xylella fastidiosa M23]
gi|28057638|gb|AAO29486.1| ribonuclease BN [Xylella fastidiosa Temecula1]
gi|71732142|gb|EAO34198.1| Ribonuclease BN [Xylella fastidiosa Ann-1]
gi|182632366|gb|ACB93142.1| ribonuclease BN [Xylella fastidiosa M23]
gi|307578531|gb|ADN62500.1| ribonuclease BN [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 292
Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 100/278 (35%), Gaps = 29/278 (10%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F E D A+ +S ALLS+ P +V L L T+I +
Sbjct: 26 LVNRFNEIDLLTQAASLSFYALLSLAPLLVLLLWLTASL-YPAAQATLITQIEQLAGNSA 84
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYF-------SSNGVEALRISLNRAYRVVEMR- 126
A + A P T LA + ++ L+ +LN + + R
Sbjct: 85 ATVAKTILQNATAQP-----TFGTLAGLWSTLLLFIGATAVFAQLQNALNLIFHTDQRRL 139
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+W R+ SFG VL L+I A+ + ++ P +G
Sbjct: 140 EGIKAWLKKRVFSFGVVLALGFLLIISMVATTALQVVFTHLPSMLPTIG----------Y 189
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+T++ + F++ +LP G T + +G YI T + S Y
Sbjct: 190 LSTLVLYTLAFAFLYRYLPDRTVNWRQAYIGGAITACLFTLGRYAIGLYISTAAPGSA-Y 248
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++ LV++Y V F +GA L A + K
Sbjct: 249 GSMGALVIMLVWMYYTSVVFFIGALLTAVIDERLRDHK 286
>gi|111025356|ref|YP_707776.1| ribonuclease [Rhodococcus jostii RHA1]
gi|110824335|gb|ABG99618.1| possible ribonuclease [Rhodococcus jostii RHA1]
Length = 340
Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 104/279 (37%), Gaps = 26/279 (9%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + + ++ F + A+ I+ L +VFP ++ + + GF+ G +I+
Sbjct: 20 ILAVPFAVVQKFGNDQAGGKATIIAFYGLFAVFPLLLLFSTVLGFVLAGHPDLEQRMINS 79
Query: 66 VFGAWPEVIAKPITDEILQVLA--VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV- 122
V +P + ++ + L A Y + +A + ++N + V
Sbjct: 80 VLADFP-----ILGTQLRSSTHPLRGNGWALVLGVLGALYGAQGIGQAAQNAMNTVWNVP 134
Query: 123 -VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R+ ++L + +++ + + Y +F P G
Sbjct: 135 FKDWPGFVGRRVRGLTILVLLGIGILVST-------TLIGYAPRFGPLSDAWASAAAAGV 187
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L F L +A ++ + G +F + W + + ++ ++ST
Sbjct: 188 NFLVFLVCFTVLT-------SATVRVRDVAVGAVFATVFWEILQRIGDWFVRYTISHSTD 240
Query: 242 -YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y A ++ L +LY+ +L AE+N + W +
Sbjct: 241 VYGFFAIVLGLLSWLYLGARLTLLAAEINVVLRYRLWPR 279
>gi|167577276|ref|ZP_02370150.1| YihY family protein [Burkholderia thailandensis TXDOH]
gi|167615416|ref|ZP_02384051.1| YihY family protein [Burkholderia thailandensis Bt4]
gi|257141989|ref|ZP_05590251.1| YihY family protein [Burkholderia thailandensis E264]
Length = 307
Score = 97.6 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 97/260 (37%), Gaps = 13/260 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA F + +MA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFRRFSADRCSSMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + E R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLAIGASATFASLNTALSVIWPATETRASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ + I +
Sbjct: 142 LGLVRVRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVAIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILG 265
S L++LY +LG
Sbjct: 257 GSFAVLLMWLYFSAAVLLLG 276
>gi|256828407|ref|YP_003157135.1| ribonuclease BN [Desulfomicrobium baculatum DSM 4028]
gi|256577583|gb|ACU88719.1| ribonuclease BN [Desulfomicrobium baculatum DSM 4028]
Length = 460
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 100/266 (37%), Gaps = 3/266 (1%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + + A F G AS ++ LLS+ P +A G Q + +
Sbjct: 32 FVIRLLRTLLFATRDFQNRQGSLQASALTFYTLLSLVPLAAMAFGIAKGFGLEQLLEKEL 91
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRV 122
F A EV+ + I +L GL I + + + + + NR + V
Sbjct: 92 LRNFAAQQEVVLQVIA-FARNMLDNTKGGLIAGIGVIILFWSVIKVLGRIEQNFNRIWAV 150
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RS +L+A + L++ V I + + G L + G
Sbjct: 151 P-SRSMSRRLSDYLAIMLIAPLLLILSGSATVFIASQVRAISNQVGMPGMLDPAVSLGLG 209
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+A L L+ ++L +P + + L I ++ + V + + + ++Y+ +Y
Sbjct: 210 FAPYLLLWALFTLLYLIMPNTRVQFAGALLAGILAGSAYQLLQVSYIAFQINVASYNAIY 269
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + + GAE+
Sbjct: 270 GSFAALPLFLIWLQLSWHIVLFGAEI 295
>gi|254521889|ref|ZP_05133944.1| ribonuclease BN [Stenotrophomonas sp. SKA14]
gi|219719480|gb|EED38005.1| ribonuclease BN [Stenotrophomonas sp. SKA14]
Length = 305
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 100/266 (37%), Gaps = 19/266 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ FVE D A+ +S ALLS+ P +V L L +I + +
Sbjct: 26 VAKRFVEIDVLTQAASVSFYALLSMAPLLVLLLWLTASL-YPPAQQALIGQIGSVAGSSV 84
Query: 75 AKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMR-----S 127
A + + P+ G S L ++ L+ +LNR + R +
Sbjct: 85 ASVADTVLHNANSQPSMGSLAGLWSTLLLFVGATAVFAQLQNALNRIFHTSGQRLDGIKA 144
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ SFG VL L++ A+ + A + PA+G L ++
Sbjct: 145 WLRKRVFSFGVVLALGFLLILSMTATTALQVVFAQLPSVLPAIGYLTSLLLYT------- 197
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ F++ +LP + G T + +G YI T + S Y + +
Sbjct: 198 ---LAFAFLYHYLPDRRVAWRQAFIGGAITSALFALGRYGIGVYIATVAPGSA-YGSMGA 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
++ LV++Y F +GA + A +
Sbjct: 254 LVISLVWIYYATAVFFVGALMTAVID 279
>gi|255533356|ref|YP_003093728.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
gi|255346340|gb|ACU05666.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
Length = 324
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 96/283 (33%), Gaps = 9/283 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-- 61
+F V + A + F+++ +++ ++ + S+ P I+ + P
Sbjct: 10 FFKAVAHLFIAAGKGFIDDRVMKLSAALAYYTIFSLTPLIIIIISATSLFLGDNMDPNTK 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + A + + + + I +S ++ S+N +
Sbjct: 70 LFGEISELVGADAANQLRSFVNNANYSGKSTFGLIIGITTLVIGASAIFVEIQDSINLIW 129
Query: 121 RVVE-----MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+V + I RL+SF + L++ V + + + L
Sbjct: 130 KVKAVPKEGWKKLLINRLLSFSLIASLGFLLLVSLVVNSIVVGLGHKIASYIQIEQVSEL 189
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ T+L + + LP K + G +FT I + +G L YI
Sbjct: 190 MMLVVTNVLTLLVVTTIFAIIFKVLPDVIIKWKPAIIGALFTAILFSLGKYLIGIYIE-V 248
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + SI+ L+++Y + GAE + Y +
Sbjct: 249 GNPGSAFGAAGSIIVILLWIYYTAIILYFGAEFTQAYAEKYGK 291
>gi|319785806|ref|YP_004145281.1| ribonuclease BN [Pseudoxanthomonas suwonensis 11-1]
gi|317464318|gb|ADV26050.1| ribonuclease BN [Pseudoxanthomonas suwonensis 11-1]
Length = 311
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
++ FVE D A+ +S LLS+ P +V L L +++D + E
Sbjct: 24 LVKRFVEADLMTQAASLSFYTLLSLAPLLVLLLWLTASL-YPPAQQSLVDQIGALAGEQA 82
Query: 75 AKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEA-LRISLNRAYRVVEMR-----S 127
A I + P G L +++ + + V A L+ +LN +R + +
Sbjct: 83 AVVAETIIRNADSQPDVGSLAGLASTGLLFVGATVVFAQLQGALNLIFRTGGEKLGGLGA 142
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ S G VL L++ A+ L A + P +G T++
Sbjct: 143 WLRKRVFSLGVVLALGFLLIVSMIATTALQLVFARIPSLLPVVG----------YVTTLV 192
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ F++ FLP + L G + T + + +G L Y+ + S Y + +
Sbjct: 193 LYALAFAFLYHFLPDRRVDWRQALLGGVITSVLFALGRYLIGLYLAQAAPGSA-YGSMGA 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ L+++Y + F GA + A + ++
Sbjct: 252 LVLLLLWMYYAALVFFAGALITAVIDERMHARQ 284
>gi|88706605|ref|ZP_01104308.1| tRNA processing ribonuclease BN [Congregibacter litoralis KT71]
gi|88699101|gb|EAQ96217.1| tRNA processing ribonuclease BN [Congregibacter litoralis KT71]
Length = 441
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 104/281 (37%), Gaps = 9/281 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + +Y + + ++ ++ +L ++ P + +A + A Q +
Sbjct: 40 MNKLPKLQRRALY-LASRYKSDRCRDTSAALTYMSLFALVPLMTVLYTMASAVPAFQGLE 98
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ I ++F + I + + + AK L + + + + N
Sbjct: 99 SNIQSLLFDNLVPETSAGIEEYLSD-FSRQAKNLTGFGIAFLIVTAVLMLRNIEQAFNLI 157
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R + R + L+ + + LA VT+ + V + + ++ +++ I
Sbjct: 158 WRTRDNRGTVSSFLLYWAILSLAPVTIGLGLGVSTFLTSFAGRLEEW-----DIIGIGGL 212
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+G ++ +P + + G + S+ + LFT + S+ +
Sbjct: 213 LLRMLPYFLQILGFTLIYAAVPNCRVPVKHAFVGGVIAATSFNIARALFTKLVAG-SSIT 271
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++Y+ ++ A + S+ Y +
Sbjct: 272 FIYGAFAAVPLFLLWIYISWNIVLIAAIVVHSLSAYQSEAQ 312
>gi|28896899|ref|NP_796504.1| ribonuclease BN [Vibrio parahaemolyticus RIMD 2210633]
gi|153838812|ref|ZP_01991479.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AQ3810]
gi|260365914|ref|ZP_05778408.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus K5030]
gi|260877799|ref|ZP_05890154.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AN-5034]
gi|260895552|ref|ZP_05904048.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus Peru-466]
gi|260902576|ref|ZP_05910971.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AQ4037]
gi|32699634|sp|Q87TE5|Y125_VIBPA RecName: Full=UPF0761 membrane protein VP0125
gi|28805107|dbj|BAC58388.1| ribonuclease BN [Vibrio parahaemolyticus RIMD 2210633]
gi|149747742|gb|EDM58638.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AQ3810]
gi|308088600|gb|EFO38295.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus Peru-466]
gi|308090086|gb|EFO39781.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AN-5034]
gi|308109704|gb|EFO47244.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AQ4037]
gi|308113465|gb|EFO51005.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus K5030]
gi|328471674|gb|EGF42551.1| hypothetical protein VP10329_00925 [Vibrio parahaemolyticus 10329]
Length = 314
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 95/263 (36%), Gaps = 8/263 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
++ + A +++ LLS+ P + ++ V V+ +
Sbjct: 22 FFKYLLKRLTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFANVGEVLQGYIIEN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + + +A + + + + + +LN +RV + R
Sbjct: 82 FVPASGEAVHTALQEFVAN-TGKMSAVGGGFLFIAALMLISNIDKNLNYIWRVKDKRRLV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + VL LV S + +L + L + +L
Sbjct: 141 FSFSM-YWMVLTLGPILVGASIAATSYVTSLQILEN-----ETLSGAFNLFLRWLPLLLS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + +++ +P K + G I + + F YI F +Y +Y LA+I
Sbjct: 195 FFAFLGLYILVPNKKVHLAHGAVGAAVAAILFELSKKGFALYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
V++Y+ + +LGAE+ A++
Sbjct: 255 ILFVWVYLCWMIVLLGAEVTAAL 277
>gi|187924332|ref|YP_001895974.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
gi|187715526|gb|ACD16750.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
Length = 305
Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 98/270 (36%), Gaps = 13/270 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGA 69
++ DA+E F + M + I + S+ P ++ + G F+G +
Sbjct: 21 VMKDAVERFSSDRCAMMGASIGFYSAFSLAPTLLIVLAITGWFVGRDIAQGRFFGQIRQL 80
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A + + G+ S + +S L +L+ + +
Sbjct: 81 LGNDAATAMQAVVEHAHRSNGSGMAAAFSVVLLLVGASATFSCLNTALDVVFAAKSPKGL 140
Query: 129 ------YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RL+S G ++ S LV+ + A+ A + V L ++ +
Sbjct: 141 AGLAWVIRARLVSLGLLMGLSFLLVVSLVLDAALQTAGSAVF----GNSTLSVVADVAQS 196
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ L GL + +LP + S L G + + VG LF Y+ T
Sbjct: 197 VFGLVILTFGLGALIKWLPDKRVNFRSALIGGAVAALLFTVGRHLFGFYLAHAGTAGAF- 255
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
S+ +++LY + F+ GAE+ AS+
Sbjct: 256 GAAGSLAVLMMWLYFCAIVFLFGAEVTASL 285
>gi|189463100|ref|ZP_03011885.1| hypothetical protein BACCOP_03803 [Bacteroides coprocola DSM 17136]
gi|189430079|gb|EDU99063.1| hypothetical protein BACCOP_03803 [Bacteroides coprocola DSM 17136]
Length = 442
Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 102/268 (38%), Gaps = 8/268 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R I+Y ++ F+ + AS ++ S LLS+ P + +A +
Sbjct: 35 RRQIYSCIKIVYLSVNQFLNDRIQIRASALTYSTLLSIIPILAILFAIARGFDFDALMEI 94
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
+ ++ I I L G+F I + + + + S N +
Sbjct: 95 QL---RKGVASQQSELIISWINSYLEHAQSGIFIGIGLIMLLWTVLILTDNIERSFNAIW 151
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V RS + F +LL + +VI S + + + + + F L +L +
Sbjct: 152 QVKHPRSVFRKITDYFSMILLLPLLIVISSGLTIFMTTYIKNMDNFL-VLAPILKFLVRL 210
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
YA +FIG +++F+P K K+ I ++ + + + S Y+
Sbjct: 211 TPYALTWGMFIG---LYIFIPNTKVKLKHAWFPGILAGTAFQAFQFFYVNSQIWVSNYNA 267
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A+I L++ + + GAE+
Sbjct: 268 IYGSFAAIPMFLLWTQISWTICLFGAEM 295
>gi|16331859|ref|NP_442587.1| serum resistance locus; BrkB [Synechocystis sp. PCC 6803]
gi|1208489|dbj|BAA10657.1| serum resistance locus; BrkB [Synechocystis sp. PCC 6803]
Length = 318
Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 107/277 (38%), Gaps = 20/277 (7%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
+I + +++ M + ++ AL S+FP + ++AG L + +I
Sbjct: 26 QLILQTFLKWQKDNCMDMGAALAYYALFSLFPICLVMLSIAGRLLGADSNYYLQLISFAQ 85
Query: 68 GAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE K + + + GL L +S +AL S+ + + VV
Sbjct: 86 NILPEQPFKVFQQALTNLNQSSFSAGLIGFGIL--VLTASRIFDALNQSVKKIWSVVHQP 143
Query: 127 -----------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG---- 171
++ ++++F VL + ++ F +A + L + +F ++
Sbjct: 144 KENIGVKHHAFNFIRNKILAFLLVLSTVMVFLLSIFANLAAKIFLTVLAEFGQSIPWVTF 203
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ L +I + + + + +I + LP + + I PG I T + +
Sbjct: 204 DSLGLITTLQTSISYFLITVVIITLFKVLPPVRLQWWDIFPGAILTAATMMALQNAVGSG 263
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
I+ Y + ++M L+++Y++ F +G E
Sbjct: 264 IIRIGENLQAYGVVGNVMVLLLWIYLIFQVFFIGCEF 300
>gi|301155259|emb|CBW14724.1| predicted inner membrane protein [Haemophilus parainfluenzae T3T1]
Length = 274
Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 101/267 (37%), Gaps = 10/267 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGA 69
+ + E A ++ S +L++ P I+ ++ V + + +F
Sbjct: 6 FLALFWQRSQENKLTQAAGSLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFTN 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + I + + +K + + ++ + + ++ +LN ++ R +
Sbjct: 66 FAPSASDVVGQYIDEFVYN-SKKMSAVGIVSLILVALMLINSIDRTLNGIWKDTSNRPIF 124
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ I + L + + A +YV+ F L + L+
Sbjct: 125 TSFAI-------YWLILTLGPLLIGTSIAASSYVKAMFEQ-SETLSFGLKLLSFVPFLST 176
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ +++ +P K I G + I + +G FT YI TF +Y +Y +A++
Sbjct: 177 WFIFTLIYMVVPNKKVSIKHSAAGALIAAIFFTLGKQAFTWYIATFPSYQLIYGAMATLP 236
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L+++ + +LGA+L A +
Sbjct: 237 IMLLWIQISWTVVLLGAQLAAVLAEVR 263
>gi|325110756|ref|YP_004271824.1| ribonuclease BN [Planctomyces brasiliensis DSM 5305]
gi|324971024|gb|ADY61802.1| ribonuclease BN [Planctomyces brasiliensis DSM 5305]
Length = 283
Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 59/275 (21%), Positives = 114/275 (41%), Gaps = 13/275 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+F +I I ++ A+ I+ +L ++ P +VF +AG + + Q I
Sbjct: 2 IRSLFGMIRQIIANWSLHQNSRNAAAIAYFSLFTLAPILVFATMIAGMVISEQAAEYEIR 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +W + I D I G L S L Y +S+ V LR++LN +
Sbjct: 62 NLLSSWIGASGQQIADSIFTNAHFFKHGPVLIIASTLVLIYGASSSVAQLRLALNGIFDE 121
Query: 123 VEM-------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
E S+ I R++S +++ + +V + VA+ A ++++ L +
Sbjct: 122 SERVDVDSRMHSFLIGRVLSAVSMIVFILLIVALLIAGVALHSQSALLKQWGSTLPLTIG 181
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ + LF V+ +LP K + G +F + + +G F Y+
Sbjct: 182 LVSTAVSVSIQTVLF---ALVYQYLPPLKRWDRTTWIGALFAAVLFELGRWGFGIYLAR- 237
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
S+ + Y +I+ LV+ + +LGAE+ A
Sbjct: 238 SSVANAYGPSNAIVAFLVWTFFATQSLLLGAEVKA 272
>gi|319409902|emb|CBY90226.1| tRNA-processing ribonuclease BN (RNase BN) [Neisseria meningitidis
WUE 2594]
Length = 418
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 87/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 25 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 84
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 85 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQR 143
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V + A + P L R AT+
Sbjct: 144 PWMMQFLVYWALLTFGPLSLGVGISFMV-GSVQDAALASGAPQWSGAL------RTAATL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 197 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 256
Query: 247 SI 248
++
Sbjct: 257 AV 258
>gi|315063173|gb|ADT77500.1| predicted inner membrane protein [Escherichia coli W]
Length = 259
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/258 (17%), Positives = 91/258 (35%), Gaps = 10/258 (3%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKPITDEI 82
+A +++ +LLS+ P + L V + +F + I I
Sbjct: 1 MTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSIQLRHFIFANFLPATGDVIQRYI 60
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
Q +A K + + A + + ++ +LN +R R Y
Sbjct: 61 EQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIWRSKRARPKI--------YSFAV 111
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
++ + + LA++ +L +I N +L +I ++ +P
Sbjct: 112 YWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRIFPLLLSWISFWLLYSIVPT 171
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ + G + + G F YI F +Y +Y LA I V++Y
Sbjct: 172 IRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIV 231
Query: 263 ILGAELNASMIIYYWRKK 280
+LGAE+ ++ Y K+
Sbjct: 232 LLGAEITVTLGEYRKLKQ 249
>gi|254674038|emb|CBA09822.1| putative membrane protein [Neisseria meningitidis alpha275]
gi|316985376|gb|EFV64324.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
Length = 418
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 87/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 25 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 84
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 85 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQR 143
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V + A + P L R AT+
Sbjct: 144 PWMMQFLVYWALLTFGPLSLGVGISFMV-GSVQDAALASGAPQWSGAL------RTAATL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 197 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 256
Query: 247 SI 248
++
Sbjct: 257 AV 258
>gi|325576968|ref|ZP_08147539.1| tRNA-processing ribonuclease BN [Haemophilus parainfluenzae ATCC
33392]
gi|325160926|gb|EGC73045.1| tRNA-processing ribonuclease BN [Haemophilus parainfluenzae ATCC
33392]
Length = 274
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 101/267 (37%), Gaps = 10/267 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGA 69
+ + E A ++ S +L++ P I+ ++ V + + +F
Sbjct: 6 FLALFWQRSQENKLTQAAGSLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFTN 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + I + + +K + + ++ + + ++ +LN ++ R +
Sbjct: 66 FAPSASDVVGQYIDEFVRN-SKQMSAVGIVSLILVALMLINSIDRTLNGIWQDTSNRPIF 124
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ I + L + + A +YV+ F L + L+
Sbjct: 125 TSFAI-------YWLILTLGPLLIGTSIAASSYVKAMFEQ-SETLSFGLKLLSFVPFLST 176
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ +++ +P K I G + I + +G FT YI TF +Y +Y +A++
Sbjct: 177 WFIFTLIYMVVPNKKVSIKHSAAGALIAAIFFTLGKQAFTWYIATFPSYQLIYGAMATLP 236
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L+++ + +LGA+L A +
Sbjct: 237 IMLLWIQISWTVVLLGAQLAAVLAEVR 263
>gi|20091117|ref|NP_617192.1| ribonuclease RN [Methanosarcina acetivorans C2A]
gi|19916218|gb|AAM05672.1| ribonuclease RN [Methanosarcina acetivorans C2A]
Length = 285
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 106/271 (39%), Gaps = 11/271 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVI 63
+ +I I+ ++E++ ++ ++ +LS+ ++F ++ FL + Q +I
Sbjct: 3 LGYIEKLITGTIKEWMEDNSKTYSAALAYYFVLSLPALLLFSVSVGSLFLRSKQIQDAII 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G + + I + V + + I + + +SN ++ L A+ +
Sbjct: 63 SNLQGFVDQSVIDMINSLFKYIPEVNSLSVGALIGFVILLWSASNVFRQMKKFLEVAWDI 122
Query: 123 VEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + ++SF V++ L + V + ++ P L
Sbjct: 123 EPAGSSTVKDFIKGSIVSFFVVIVFGGLLALSIIVEGVLYAVSKVFQECCPFPPILARYA 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ A+ L L + + V+ LP K + + G + T I +G Y +S
Sbjct: 183 GSI---ASFLILVLFFMLVYRVLPDTKLDLKPVFVGSLVTVILINIGKYAIGFYFA-YSN 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++Y + S++ + +Y + + +GAE
Sbjct: 239 PVSVYGAIGSVVGVFLLIYYISIMITIGAEF 269
>gi|308388707|gb|ADO31027.1| putative ribonuclease BN [Neisseria meningitidis alpha710]
Length = 416
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 87/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 25 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 84
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 85 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQR 143
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V + A + P L R AT+
Sbjct: 144 PWMMQFLVYWALLTFGPLSLGVGISFMV-GSVQDAALASGAPQWSGAL------RTAATL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 197 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 256
Query: 247 SI 248
++
Sbjct: 257 AV 258
>gi|240117260|ref|ZP_04731322.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae PID1]
gi|268602956|ref|ZP_06137123.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID1]
gi|268587087|gb|EEZ51763.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID1]
Length = 408
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + I F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-DAFRDQANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + F+ + + + + L AT+
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGV-GISFMVGSVQDSVLSSGAQQWADALKT------AATL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 187 TFMTLLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAFA 246
Query: 247 SI 248
++
Sbjct: 247 AV 248
>gi|304388254|ref|ZP_07370374.1| YihY family protein [Neisseria meningitidis ATCC 13091]
gi|254669987|emb|CBA04685.1| putative membrane protein [Neisseria meningitidis alpha153]
gi|304337781|gb|EFM03930.1| YihY family protein [Neisseria meningitidis ATCC 13091]
Length = 416
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 87/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 25 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 84
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 85 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQR 143
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V + A + P L R AT+
Sbjct: 144 PWMMQFLVYWALLTFGPLSLGVGISFMV-GSVQDAALASGAPQWSGAL------RTAATL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 197 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 256
Query: 247 SI 248
++
Sbjct: 257 AV 258
>gi|226226515|ref|YP_002760621.1| tRNA-processing ribonuclease BN [Gemmatimonas aurantiaca T-27]
gi|226089706|dbj|BAH38151.1| tRNA-processing ribonuclease BN [Gemmatimonas aurantiaca T-27]
Length = 333
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 108/277 (38%), Gaps = 10/277 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--- 57
+R+ +DI + E++ +A ++ + LL++ PF++ FL +Q
Sbjct: 9 IRQKAESWWDIARRVWQQSAEDNVPFLAGGLAFNILLALVPFVLLLIGGLSFLLGNQPAE 68
Query: 58 FVPTVIDVVFGAWP--EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
V TV +V P A + ++ + + SA+ A+FS+ +LR
Sbjct: 69 AVDTVTSLVGRLLPNGSNAADALLRGVISDVLETRGAVTLYSAIGFAWFSTRLFGSLRSV 128
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVI----MSFVFVAIPLALAYVRKFFPALG 171
L + + RS +L +A++ +V+ +++ +A L +R+
Sbjct: 129 LALTFDGSD-RSIVAGKLFDLLATAVATLAVVVYVVFSAYLDLATTRGLTLLREVGLRES 187
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ + + +L +F ++ LP + + G + + + LF
Sbjct: 188 AMGGLAYLIGRALAVLLVFALFSALYRGLPRTRPPVRVAFVGGATAAVLFEIARHLFAIV 247
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ S +A+I+ + + Y F++G E+
Sbjct: 248 VRNADPSSLYTGTIAAIVAVVFWTYYAAFLFLIGGEV 284
>gi|121634319|ref|YP_974564.1| fused ribonuclease BN/uncharacterized domain-containing protein
[Neisseria meningitidis FAM18]
gi|166199582|sp|A1KSD3|Y462_NEIMF RecName: Full=UPF0761 membrane protein NMC0462
gi|120866025|emb|CAM09763.1| putative ribonuclease BN [Neisseria meningitidis FAM18]
gi|261393105|emb|CAX50702.1| tRNA-processing ribonuclease BN (RNase BN) [Neisseria meningitidis
8013]
Length = 408
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 87/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V + A + P L R AT+
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGVGISFMV-GSVQDAALASGAPQWSGAL------RTAATL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 187 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 246
Query: 247 SI 248
++
Sbjct: 247 AV 248
>gi|269119358|ref|YP_003307535.1| ribonuclease BN [Sebaldella termitidis ATCC 33386]
gi|268613236|gb|ACZ07604.1| ribonuclease BN [Sebaldella termitidis ATCC 33386]
Length = 424
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/270 (15%), Positives = 105/270 (38%), Gaps = 10/270 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+E+F ++ ++ + + ++ ++L+V P I + G F
Sbjct: 16 KEHFEKQILLVITVYRNYNDSQTQLWTASLTYYSILAVIPVIALTLGITKGFGIDMFFE- 74
Query: 62 VIDVVFGAWPE--VIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNR 118
+ ++ +PE A I + +++ + T + + + + L + NR
Sbjct: 75 --EKIYSTFPESKEGAAMIINVAKKLIDSTKGSVLTGVGVVILLWTILKLLLMLENAFNR 132
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
++V RS + V L + ++ + L + + F + L +
Sbjct: 133 VWKVKRDRSIVRRMIDYVAIVFLGPIFFAVVLATISLLTRYLRGLARGFLFSMGVPLFLN 192
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+A L + + +++ +P K K L I T I + + +F H + S Y
Sbjct: 193 ----FAGFLIIILLFTCIYIIVPNTKVKFKPALVAGIATTIMFYILKFIFFHVQSSISKY 248
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +Y L+ I L+++ + + ++GA++
Sbjct: 249 NAIYGSLSFIPIFLIWVQYIWMSVLVGAQI 278
>gi|194291492|ref|YP_002007399.1| ribonuclease; ribonuclease bn family [Cupriavidus taiwanensis LMG
19424]
gi|193225396|emb|CAQ71342.1| putative ribonuclease; ribonuclease BN family [Cupriavidus
taiwanensis LMG 19424]
Length = 301
Score = 96.8 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 104/285 (36%), Gaps = 6/285 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
+ + + + F G +A ++ ALLS+ P ++ + + +
Sbjct: 8 ISDLLRHPLRFAWYTLRQFRANQGLLLAGAVAYYALLSIVPLLILMVIALSHVIEPELLL 67
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
T+ + P +T+ + G + + +FSS L +++
Sbjct: 68 STLARYLEWIVPGQARALVTELAGFLRNRGTIGWVLLGTM--LFFSSLAFTVLENAMSVI 125
Query: 120 YRVV---EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ R + ++ L+ + Y+ + S+ L++++ V A+ + +L +
Sbjct: 126 FEHRVAIRRRHFLVSALLPYCYIAVLSIGLLLVTVVSGALLAIGERHVEVLGHDWSLDRL 185
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + L +++ +P + + L G + + W + + Y T S
Sbjct: 186 STGLLYLLGFIGEVLMLTSIYMVMPVGRLSLRHALSGAVIAAVLWEISRHVLVWYFTTLS 245
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+Y L + + L+ L + +LGA++ A W K P
Sbjct: 246 QVGRVYGSLTTAIVVLLSLEIAATLLLLGAQVIAEFERGAWHKLP 290
>gi|325131677|gb|EGC54382.1| YihY family protein [Neisseria meningitidis M6190]
gi|325137693|gb|EGC60270.1| YihY family protein [Neisseria meningitidis ES14902]
Length = 408
Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 87/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V + A + P L R AT+
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGVGISFMV-GSVQDAALASGAPQWSGAL------RTAATL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 187 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 246
Query: 247 SI 248
++
Sbjct: 247 AV 248
>gi|218767646|ref|YP_002342158.1| ribonuclease BN/unknown domain fusion protein [Neisseria
meningitidis Z2491]
gi|32699649|sp|Q9JVT9|Y700_NEIMA RecName: Full=UPF0761 membrane protein NMA0700
gi|288559249|sp|A9M1Y8|Y461_NEIM0 RecName: Full=UPF0761 membrane protein NMCC_0461
gi|121051654|emb|CAM07957.1| putative ribonuclease BN [Neisseria meningitidis Z2491]
gi|325127643|gb|EGC50559.1| YihY family protein [Neisseria meningitidis N1568]
gi|325133667|gb|EGC56324.1| YihY family protein [Neisseria meningitidis M13399]
gi|325139742|gb|EGC62276.1| YihY family protein [Neisseria meningitidis CU385]
gi|325143849|gb|EGC66164.1| YihY family protein [Neisseria meningitidis M01-240013]
gi|325197735|gb|ADY93191.1| YihY family protein [Neisseria meningitidis G2136]
gi|325200789|gb|ADY96244.1| YihY family protein [Neisseria meningitidis H44/76]
gi|325206625|gb|ADZ02078.1| YihY family protein [Neisseria meningitidis M04-240196]
Length = 408
Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 88/242 (36%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + F+ + A + P L R AT+
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGV-GISFMVGSVQDAALASGAPQWSGAL------RTAATL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 187 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 246
Query: 247 SI 248
++
Sbjct: 247 AV 248
>gi|3493604|gb|AAC33456.1| unknown [Vitreoscilla sp. C1]
Length = 376
Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 82/237 (34%), Gaps = 10/237 (4%)
Query: 38 SVFPFIVFGANLAGFLGAHQFVPTVIDVVF--GAWPEVIAKPITDEILQVLAVPAKGLFT 95
++ PF + + + P+ I I + + L +K L T
Sbjct: 30 ALVPFFTIALTVISAFPMFEGITRQFQNFITDNLVPQAIYTIINEYLFGFLNNASK-LTT 88
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
I + + + + + N+ + ++R W +L+ L + +
Sbjct: 89 IGIIMLVASAILLINTIETAFNQIWGTTKLRPW-------HTLLLVYGALLTLRPVILGL 141
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
L + K + ++ ++L I L ++ +P+ L G +
Sbjct: 142 TISQLGRLTKQSIFALHYPTWALLLQVSISILVNMILLWLMYRVVPSRYVPAKHALVGAL 201
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
++ + + +F+ Y Y +Y A++ LV++ +L + GA L ++
Sbjct: 202 WSAVILEIAKRIFSSYFGHVGNYQVIYGAFAAVPLFLVWINVLWAILLSGAILTNAL 258
>gi|313203163|ref|YP_004041820.1| ribonuclease bn [Paludibacter propionicigenes WB4]
gi|312442479|gb|ADQ78835.1| ribonuclease BN [Paludibacter propionicigenes WB4]
Length = 440
Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 102/267 (38%), Gaps = 4/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R Y + I A F+ ++ AS ++ S L ++ P + G + + +
Sbjct: 31 RRYAYRLVKTIILATRGFIVDNLNVRASALTYSILFAIIPTFALIIAIGKGFGVEKIIES 90
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+D F ++ + + + + N + + N ++
Sbjct: 91 SLDNTFIGQADMTPTVMGFVDRYLATTQRGLFIGVGIAILFWSVMNLFMQVERAFNSIWQ 150
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R++ F +++ + +V + + + AL + L I+ G
Sbjct: 151 VKKKRTFIRQFSTYFSGIMVVPLLIVFSGGLSIYVSSALKQSYVY----DVLSPILRFGV 206
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +I +++ +P + K + + I ++ + +L+ + V S Y+ +
Sbjct: 207 KFLPYIINWIVFTSMYMIIPNTRVKFSNAMIAGIVAGTAFQIFQMLYINGQVYLSRYNIV 266
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A+I L++L + + +LGAE+
Sbjct: 267 YGSFAAIPLLLLWLQISCLIVLLGAEI 293
>gi|269123586|ref|YP_003306163.1| ribonuclease BN [Streptobacillus moniliformis DSM 12112]
gi|268314912|gb|ACZ01286.1| ribonuclease BN [Streptobacillus moniliformis DSM 12112]
Length = 405
Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 105/259 (40%), Gaps = 9/259 (3%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+ + +D +AS+++ +L++FPF +A G + + ++ + E +
Sbjct: 16 FKKYFSKDLSLLASNLTYMMILTIFPFFAIILGIAKGFGLDEKLIAQVNALLPQN-EQVL 74
Query: 76 KPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
I + ++ G+ T + L + + + L + N + V + R++
Sbjct: 75 AYILETTNNLIENARGGILTGLGILILIFSVISMFDLLENTFNDIWNVRKNRNF------ 128
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
++ + + I + I + + + +F + ++ + M + +
Sbjct: 129 -TSKIISYTALVFITPIFILLILASSSVLVEFIKSFADISNLTKYILKVFNMFMRMMFIS 187
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ + +P + KI+ + G + I + V++ + + S Y+ +Y LA I L++
Sbjct: 188 GLFILIPNKRVKILPAIIGAAISDIGLNILYVIYVYLQFSISRYNIIYGSLAFIPIFLIW 247
Query: 255 LYMLGVFFILGAELNASMI 273
+ ++GA++ ++
Sbjct: 248 IKYAWTIILIGAQITYTIQ 266
>gi|163733662|ref|ZP_02141104.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
gi|161392773|gb|EDQ17100.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
Length = 112
Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 195 FVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ + P+ + + G + + W+V + F Y+ F +Y+ + LA ++ L+
Sbjct: 1 MLYRYAPSRDAAEWKWASVGAVVGCLMWIVASAGFAFYVSNFGSYNESFGTLAGVIVLLM 60
Query: 254 FLYMLGVFFILGAELNASMIIY 275
+ ++ +LGAELNA +
Sbjct: 61 WFWISAFIILLGAELNAELEAQ 82
>gi|303235668|ref|ZP_07322275.1| YihY family protein [Prevotella disiens FB035-09AN]
gi|302484115|gb|EFL47103.1| YihY family protein [Prevotella disiens FB035-09AN]
Length = 445
Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 110/268 (41%), Gaps = 5/268 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +Y A++ ++E+ A A+ ++ + +L++ P + +A G ++ +
Sbjct: 25 KSRLIGLLQRLYLAVKLYLEQGHVAAATELAFTTILAIVPIVAIIFGIANGFGFGTYIES 84
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
V F A P +A + + L GLF I + Y + + + + +
Sbjct: 85 VFRESFSAQP-QVADWLINLTRSYLEHAQTGLFIGIGLVFMLYSVISLIHNIESVFDDIW 143
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V R + + L + +++MS + + +YV L L +
Sbjct: 144 QVKTARPISRIIVDYTAMMFLMPIGIIVMSGLSIF---VFSYVEGLTQYLFVGTLTRFTF 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L L + + ++ F+P AK KIM ++ + + ++ H + ++Y+
Sbjct: 201 HYVVPWLILTVMFVVLYTFMPNAKIKIMKVICPAMLASFLMLCLQAVYIHGQIFLTSYNA 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y LA++ ++++ + + AEL
Sbjct: 261 IYGSLAALPLFMLWMQVSWHICLFCAEL 288
>gi|150260908|ref|ZP_01917636.1| ribonuclease BN [Yersinia pestis CA88-4125]
gi|162419107|ref|YP_001604675.1| ribonuclease BN [Yersinia pestis Angola]
gi|165926182|ref|ZP_02222014.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936252|ref|ZP_02224821.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011441|ref|ZP_02232339.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213649|ref|ZP_02239684.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167402120|ref|ZP_02307597.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419393|ref|ZP_02311146.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167427048|ref|ZP_02318801.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470253|ref|ZP_02334957.1| ribonuclease BN [Yersinia pestis FV-1]
gi|218927249|ref|YP_002345124.1| ribonuclease BN [Yersinia pestis CO92]
gi|229836136|ref|ZP_04456304.1| Ribonuclease BN [Yersinia pestis Pestoides A]
gi|229839875|ref|ZP_04460034.1| Ribonuclease BN [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841957|ref|ZP_04462112.1| Ribonuclease BN [Yersinia pestis biovar Orientalis str. India 195]
gi|229900602|ref|ZP_04515726.1| Ribonuclease BN [Yersinia pestis Nepal516]
gi|32699645|sp|Q8ZJR1|Y028_YERPE RecName: Full=UPF0761 membrane protein YPO0028/y3801/YP_0029
gi|226737465|sp|A9R654|Y034_YERPG RecName: Full=UPF0761 membrane protein YpAngola_A0034
gi|288559247|sp|A4TSF8|Y3877_YERPP RecName: Full=UPF0761 membrane protein YPDSF_3877
gi|288559251|sp|Q1C246|Y3514_YERPA RecName: Full=UPF0761 membrane protein YPA_3514
gi|288559256|sp|Q1CN43|Y254_YERPN RecName: Full=UPF0761 membrane protein YPN_0254
gi|115345860|emb|CAL18718.1| ribonuclease BN [Yersinia pestis CO92]
gi|149290316|gb|EDM40393.1| ribonuclease BN [Yersinia pestis CA88-4125]
gi|162351922|gb|ABX85870.1| tRNA-processing ribonuclease BN [Yersinia pestis Angola]
gi|165915866|gb|EDR34474.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922042|gb|EDR39219.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989587|gb|EDR41888.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205051|gb|EDR49531.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166963387|gb|EDR59408.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048495|gb|EDR59903.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167053975|gb|EDR63806.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229681941|gb|EEO78033.1| Ribonuclease BN [Yersinia pestis Nepal516]
gi|229690267|gb|EEO82321.1| Ribonuclease BN [Yersinia pestis biovar Orientalis str. India 195]
gi|229696241|gb|EEO86288.1| Ribonuclease BN [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229706584|gb|EEO92590.1| Ribonuclease BN [Yersinia pestis Pestoides A]
gi|262360214|gb|ACY56935.1| ribonuclease BN [Yersinia pestis D106004]
gi|262364161|gb|ACY60718.1| ribonuclease BN [Yersinia pestis D182038]
gi|320017061|gb|ADW00633.1| Ribonuclease BN [Yersinia pestis biovar Medievalis str. Harbin 35]
Length = 294
Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 23 LYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFAEISIKLKAFIFANFMPA 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 83 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKIQRSLVFSFA 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ Y ++ ++ +++ V L+ + +++ I +L ++
Sbjct: 142 V---YWMVLTLGPILVGASMVISSYLLSLHWLAHARVDSMIDEI---LRVFPLLISWVSF 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G F YI F +Y +Y LA I +
Sbjct: 196 WLLYSVVPTVRVPARDALIGALVAALLFELGKKGFAMYITLFPSYQLIYGVLAVIPILFL 255
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y +
Sbjct: 256 WVYWSWCIVLLGAEITVTLGEYRAERH 282
>gi|254517319|ref|ZP_05129376.1| exoribonuclease II [gamma proteobacterium NOR5-3]
gi|219674157|gb|EED30526.1| exoribonuclease II [gamma proteobacterium NOR5-3]
Length = 293
Score = 96.4 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 100/267 (37%), Gaps = 12/267 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFG 68
DI+ A++ ++E +A A ++ L S+ P ++ ++ G G + +
Sbjct: 2 DILKQAVKVWLESHAFANAGSLAFFTLFSIAPVMIVLVSVIGVFYGQEAAQGQIAAQLQE 61
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEMRS 127
A+ + + + + T++ +AA ++ ++ SLN + V S
Sbjct: 62 VVGPDAAETVQNAVAASSLKEGGLVATLAGIAAMLLGATTVFGQMQNSLNAIWTVAPKPS 121
Query: 128 ------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
RL S VL +++ + V + L V+ + P +
Sbjct: 122 RNSILLLIQKRLTSLSIVLAIGFVMLVSLSLSVGLRYVLHNVQGWLPWYD---VAFGFAD 178
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++L + LP K + G + T + + G L + Y+ +T ++
Sbjct: 179 MLTSILITSFLFATIFKVLPDVKLSWRDVALGSLLTAVLFTFGRSLISLYLSYTAT-AST 237
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y S++ L+++ + + GA
Sbjct: 238 YGAAGSLVLLLLWVNYSSLILLFGAAF 264
>gi|254804408|ref|YP_003082629.1| putative ribonuclease BN [Neisseria meningitidis alpha14]
gi|254667950|emb|CBA04187.1| putative ribonuclease BN [Neisseria meningitidis alpha14]
Length = 418
Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 88/242 (36%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 25 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 84
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 85 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQR 143
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + F+ + A + P L R AT+
Sbjct: 144 PWMMQFLVYWALLTFGPLSLGV-GISFMVGSVQDAALASGAPQWSGAL------RTAATL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 197 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 256
Query: 247 SI 248
++
Sbjct: 257 AV 258
>gi|15676431|ref|NP_273569.1| fused ribonuclease BN/uncharacterized domain-containing protein
[Neisseria meningitidis MC58]
gi|32699650|sp|Q9K0R0|Y524_NEIMB RecName: Full=UPF0761 membrane protein NMB0524
gi|7225749|gb|AAF40954.1| putative ribonuclease BN [Neisseria meningitidis MC58]
Length = 406
Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 88/242 (36%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + F+ + A + P L R AT+
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGV-GISFMVGSVQDAALASGAPQWSGAL------RTAATL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 187 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 246
Query: 247 SI 248
++
Sbjct: 247 AV 248
>gi|293397675|ref|ZP_06641881.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae F62]
gi|291611621|gb|EFF40690.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae F62]
Length = 408
Score = 96.1 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + I F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-DAFRDQANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + F+ + + + + L AT+
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGV-GISFMVGSVQDSVLSSGAQQWADALKT------AATL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 187 TFMTLLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAFA 246
Query: 247 SI 248
++
Sbjct: 247 AV 248
>gi|302346602|ref|YP_003814900.1| YihY family protein [Prevotella melaninogenica ATCC 25845]
gi|302151070|gb|ADK97331.1| YihY family protein [Prevotella melaninogenica ATCC 25845]
Length = 448
Score = 96.1 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 101/267 (37%), Gaps = 3/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R F Y ++ F D A + +S S ++++ P +A G QF+
Sbjct: 27 RNMLIRQFQKFYLTVKFFFVRDHAASTAQLSFSTIMAIVPIASMIFAIANGFGFGQFLEK 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ A PE + ++ I + Y + + + + + ++
Sbjct: 87 QFREMLSAQPEAATWLLKLTQSYLVHAKTGLFIGIGLMIMLYSVFSLIRTVETTFDNIWQ 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R + + L ++++I+S + + ++V + ++ R
Sbjct: 147 VKDSRPLSRIVIDYTALMFLVPISIIILSGLSIYF---YSFVENLNGLRFLGTIASFSLR 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + I +++F+P AK KI + + I+ + ++ H + ++Y+ +
Sbjct: 204 YLVPWAILTLMFIVLYVFMPNAKVKITKTIGPAMIASIAMLCLQAVYIHGQIFLTSYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A++ ++++ + AEL
Sbjct: 264 YGSFAALPLFMLWILASWYICLFCAEL 290
>gi|170026393|ref|YP_001722898.1| ribonuclease BN [Yersinia pseudotuberculosis YPIII]
gi|226737466|sp|B1JR04|Y4186_YERPY RecName: Full=UPF0761 membrane protein YPK_4186
gi|169752927|gb|ACA70445.1| ribonuclease BN [Yersinia pseudotuberculosis YPIII]
Length = 294
Score = 96.1 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 23 LYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFAEISIKLKAFIFANFMPA 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 83 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKIQRSLVFSFA 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ Y ++ ++ +++ V L+ + +++ I +L ++
Sbjct: 142 V---YWMVLTLGPILVGASMVISSYLLSLHWLAHARVDSMIDEI---LRVFPLLISWVSF 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G F YI F +Y +Y LA I +
Sbjct: 196 WLLYSVVPTVRVPARDALIGALVAALLFELGKKGFAMYITLFPSYQLIYGVLAVIPILFL 255
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y +
Sbjct: 256 WVYWSWCIVLLGAEITVTLGEYRAERH 282
>gi|300776118|ref|ZP_07085977.1| ribonuclease BN family protein [Chryseobacterium gleum ATCC 35910]
gi|300505251|gb|EFK36390.1| ribonuclease BN family protein [Chryseobacterium gleum ATCC 35910]
Length = 313
Score = 96.1 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 101/275 (36%), Gaps = 10/275 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
M + ++++ D + ++ ++ A+ S+ ++ + G F G
Sbjct: 1 MIKTAKFFWEVLKDTFTEWNNSSASKDSASLAYYAIFSIPGLLIIIIWVLGNFFGEEAIR 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + G +AK I + ++ + + + + S+ L+ SLN
Sbjct: 61 GQISTQISGIMGPDVAKSIEGMLAGALIDKKNIFMKAVGVGSLVFGSTTLFFQLQHSLNT 120
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V + + R S G +L+ L+I + I L + ++F +
Sbjct: 121 LWEVEAAPKKALVKFLLDRANSLGMILILGFLLMITMILSSLISLFNTIITQYFGFETYM 180
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L+ + N + ++ L L+F LP + G T + + +G L + Y
Sbjct: 181 LVELVNFAVGFGLVMLLFALMF--KVLPDVLISWKPVWKGAFLTTVLFTLGKFLLSLYFN 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ + +++ ++++ + GAE
Sbjct: 239 Q-VKPTSAFGAAGTVILIMMWINYSCMLIFFGAEF 272
>gi|325129662|gb|EGC52477.1| YihY family protein [Neisseria meningitidis OX99.30304]
gi|325141745|gb|EGC64198.1| YihY family protein [Neisseria meningitidis 961-5945]
gi|325202688|gb|ADY98142.1| YihY family protein [Neisseria meningitidis M01-240149]
gi|325207566|gb|ADZ03018.1| YihY family protein [Neisseria meningitidis NZ-05/33]
Length = 408
Score = 96.1 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 88/242 (36%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + F+ + A + P L R AT+
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGV-GISFMVGSVQDAALASGAPQWSGAL------RTAATL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 187 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 246
Query: 247 SI 248
++
Sbjct: 247 AV 248
>gi|51594385|ref|YP_068576.1| ribonuclease BN [Yersinia pseudotuberculosis IP 32953]
gi|153950591|ref|YP_001399031.1| ribonuclease BN [Yersinia pseudotuberculosis IP 31758]
gi|67460656|sp|Q66GF5|Y027_YERPS RecName: Full=UPF0761 membrane protein YPTB0027
gi|166918693|sp|A7FCQ3|Y030_YERP3 RecName: Full=UPF0761 membrane protein YpsIP31758_0030
gi|51587667|emb|CAH19267.1| ribonuclease BN [Yersinia pseudotuberculosis IP 32953]
gi|152962086|gb|ABS49547.1| tRNA-processing ribonuclease BN [Yersinia pseudotuberculosis IP
31758]
Length = 294
Score = 95.7 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 23 LYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFAEISIKLKAFIFANFMPA 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 83 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKIQRSLVFSFA 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ Y ++ ++ +++ V L+ + +++ I +L ++
Sbjct: 142 V---YWMVLTLGPILVGASMVISSYLLSLHWLAHARVDSMIDEI---LRVFPLLISWVSF 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G F YI F +Y +Y LA I +
Sbjct: 196 WLLYSVVPTVRVPARDALIGALVAALLFELGKKGFAMYITLFPSYQLIYGVLAVIPILFL 255
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y +
Sbjct: 256 WVYWSWCIVLLGAEITVTLGEYRAERH 282
>gi|90020548|ref|YP_526375.1| tRNA-processing RNAse BN [Saccharophagus degradans 2-40]
gi|123396513|sp|Q21MB6|Y901_SACD2 RecName: Full=UPF0761 membrane protein Sde_0901
gi|89950148|gb|ABD80163.1| tRNA-processing RNAse BN [Saccharophagus degradans 2-40]
Length = 433
Score = 95.7 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/269 (13%), Positives = 93/269 (34%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + + + + FVE+ A+ ++ +L ++ P + ++ A V
Sbjct: 11 IKPFVFALGRFFGNLYKEFVEKGCQKSAAALTYMSLFAMVPLMAVFYSMFSMFPAFDGVA 70
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ D++F + + + + A+ L A + + + + N
Sbjct: 71 QQLQDMIFSHFVPETGSEVQQYLAN-FSQQARNLSAAGAGLLVVTAYLMLTNIEKTFNAI 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V R R I+ + A +T+ + K + + +
Sbjct: 130 WGVKAAR-----RGITSFLLYWAVLTIGPLLLGAGLAMSTYLLSLKIIVNEYDAIGVTNL 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
Y + + +P + I L G I T + + + + F + S++S
Sbjct: 185 FFSYLPLFTTSAAFTLLFAAVPNCRVPIKFALIGGILTAVCFELLKIGFGWVVAN-SSFS 243
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A + L+++ +L + + GA
Sbjct: 244 QIYGAFAVVPLFLLWVNLLWMIILGGAVF 272
>gi|110639914|ref|YP_680124.1| ribonuclease [Cytophaga hutchinsonii ATCC 33406]
gi|110282595|gb|ABG60781.1| probable ribonuclease [Cytophaga hutchinsonii ATCC 33406]
Length = 299
Score = 95.7 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 102/284 (35%), Gaps = 10/284 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
M Y ++ + + + D + ++ I+ A+ S+ +V + G+ + V
Sbjct: 1 MLIYLKDFPGLLKTTFKEWNKRDPFRQSAVIAYYAIFSMPGLLVLIVTIMGYFFSRDVVS 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNR 118
+I + + +AK +L L +I +A + GV AL+ +LN
Sbjct: 61 QNIIHQIASTFGAEVAKQTELMLLNAGKTKETILGSIIGVATLLVGATGVFVALQKTLNE 120
Query: 119 AYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V RL SFG +L + L+I V A+ +++ +
Sbjct: 121 IWEVEITNKKGILPMLKNRLFSFGLILAIAFLLLISLVVSTALSAVGEWIQSDMSEI--F 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ +++ + + LP + G I T I + +G Y
Sbjct: 179 IAFFNIINFTVSLIIISFLFALIFRILPDVHITWKQVWLGAILTGILFTIGKTAIGFYFG 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+T + Y SI+ L+++ + GAE + Y+
Sbjct: 239 K-ATPESAYGAGGSIVLLLLWVSYSSMILFFGAEFTHTFTKKYF 281
>gi|240080023|ref|ZP_04724566.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae FA19]
gi|268596167|ref|ZP_06130334.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae FA19]
gi|268549955|gb|EEZ44974.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae FA19]
Length = 408
Score = 95.7 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 86/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + I F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-DAFRDQANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + F+ + + + + L A +
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGV-GISFMVGSVQDSVLSSGAQQWADALKT------AARL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 187 AFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAFA 246
Query: 247 SI 248
++
Sbjct: 247 AV 248
>gi|149174168|ref|ZP_01852796.1| probable serum resistance protein brkB [Planctomyces maris DSM
8797]
gi|148847148|gb|EDL61483.1| probable serum resistance protein brkB [Planctomyces maris DSM
8797]
Length = 325
Score = 95.7 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 109/293 (37%), Gaps = 36/293 (12%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F + +++ + F+ ++ + I+ + S+ P + + + + V TVI
Sbjct: 2 RFHRLRNVLKRSGSDFLSDECMGSGAAIAYYTIFSLPPLLAIVFAVTTQFWSAEKVSTVI 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTIS---------------------ALAAA 102
+ G PI + Q + ++ +
Sbjct: 62 NSQLGL-------PIEQSVSQADNDSSASALNLTRVAERAQPGHQQEHPWWARILGIGIL 114
Query: 103 YFSSNGVEA-LRISLNRAYRVV-EMR-----SWYITRLISFGYVLLASVTLVIMSFVFVA 155
FS++GV A L+ +LN+A+ V + R S+ RLIS G +++ + L++ +
Sbjct: 115 IFSASGVLAQLQGALNKAWNVEPDPRQGGLMSFLKKRLISLGMLVVIGLLLLVSLVLTTF 174
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ +++ G +L ++ T+ + LP A + G
Sbjct: 175 VDEFTRWIQNG-ELTGGMLTLMMLINGILTLGLAILLFAATFKVLPDAHIPWRDVFVGAG 233
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T +V+G Y+ S+ + S++ L+++Y + +LGAE
Sbjct: 234 VTAFLFVIGKAGIGWYLQYSEAGSSWGSAATSMIGILIWVYYSSLIILLGAEF 286
>gi|238797631|ref|ZP_04641127.1| tRNA-processing ribonuclease BN [Yersinia mollaretii ATCC 43969]
gi|238718495|gb|EEQ10315.1| tRNA-processing ribonuclease BN [Yersinia mollaretii ATCC 43969]
Length = 273
Score = 95.7 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 101/269 (37%), Gaps = 9/269 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ ++ H++ +LLS+ P I L + + +F +
Sbjct: 2 LYTRIDKDGLTMLSGHLAYVSLLSLVPLITVVFALFAAFPMFADISIKLKAFIFSNFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN+ +R RS +
Sbjct: 62 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNQIWRSKTQRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S V + L+L ++ + +I +L ++
Sbjct: 121 V-YWMVLTLGPILVGASMVISSYLLSLQWLAT-----AQVDSMIDEILRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDALIGAFVAALLFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYY-WRKKP 281
++Y +LGAE+ ++ Y R KP
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRALRHKP 263
>gi|238764299|ref|ZP_04625250.1| tRNA-processing ribonuclease BN [Yersinia kristensenii ATCC 33638]
gi|238697450|gb|EEP90216.1| tRNA-processing ribonuclease BN [Yersinia kristensenii ATCC 33638]
Length = 273
Score = 95.3 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 46/268 (17%), Positives = 100/268 (37%), Gaps = 8/268 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 2 LYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFADISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKVHRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S V + L+L ++ + +I +L ++
Sbjct: 121 V-YWMVLTLGPILVGASMVISSYLLSLQWLAN-----AQVDSMIDETLRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + + G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDAVIGALIAALLFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKKP 281
++Y +LGAE+ ++ Y ++
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRAQRDK 262
>gi|238750777|ref|ZP_04612275.1| tRNA-processing ribonuclease BN [Yersinia rohdei ATCC 43380]
gi|238710921|gb|EEQ03141.1| tRNA-processing ribonuclease BN [Yersinia rohdei ATCC 43380]
Length = 273
Score = 95.3 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 2 LYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPTFSDISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q + + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVENSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKTQRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S V + L+L ++ + +I +L ++
Sbjct: 121 V-YWMVLTLGPILVGASMVISSYLLSLQWLAN-----AQVDSMIDELLRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P A+ + G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYMVVPTARVPAKDAVIGALVAALFFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRAQRH 261
>gi|240013444|ref|ZP_04720357.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae DGI18]
gi|240112233|ref|ZP_04726723.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae MS11]
gi|240120515|ref|ZP_04733477.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae PID24-1]
gi|268598292|ref|ZP_06132459.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae MS11]
gi|268582423|gb|EEZ47099.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae MS11]
Length = 408
Score = 95.3 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 84/243 (34%), Gaps = 11/243 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + I F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-DAFRDQANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V L + + A
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGVGISFMV--------GSVQDSVLSSGAQQWADALKTAAR 185
Query: 187 LALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
LA L++ ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASI 248
A++
Sbjct: 246 AAV 248
>gi|238790759|ref|ZP_04634519.1| tRNA-processing ribonuclease BN [Yersinia frederiksenii ATCC 33641]
gi|238721157|gb|EEQ12837.1| tRNA-processing ribonuclease BN [Yersinia frederiksenii ATCC 33641]
Length = 273
Score = 95.3 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 2 LYNRIEKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFADISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNTIWRSKTPRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S V + L+L ++ + +I +L ++
Sbjct: 121 V-YWMVLTLGPILVGASMVISSYLLSLQWLAN-----AQVDSMIDEVLRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + + G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDAIIGALVAALLFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRAQRH 261
>gi|254000056|ref|YP_003052119.1| cyclic nucleotide-binding protein [Methylovorus sp. SIP3-4]
gi|253986735|gb|ACT51592.1| cyclic nucleotide-binding protein [Methylovorus sp. SIP3-4]
Length = 426
Score = 95.3 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 111/268 (41%), Gaps = 9/268 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFP-FIVFGANLAGFLGAHQFVP 60
R + F I + + F +G+++++ +S A+ ++ P ++ L+ + + +
Sbjct: 26 RRRYRTPFFIFRETLSAFQLHNGFSISASLSFYAMFALIPMALLIFFMLSHLVVSSNYAI 85
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ ++ + I E+ V A A + + ALR + +
Sbjct: 86 VKLAILTSNLVPKFSHRIMIEVYNVSKHQAV-WGAFGMFALFWIVTPLAGALRSAFHTIA 144
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+VE S+ ++ ++ + ++++ F+F + L L V FF +I N
Sbjct: 145 AMVEEPSFIKRKIKD----VIGVLGILLLFFIFTLMGLGLEKVIDFFNPSATHTKLIDN- 199
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++++ + + + A+ + +IL G T I W+ F ++ +Y T
Sbjct: 200 --VSSIVICTVLIAIFYRIFFPARISLKNILIGSAITGIMWIAMRPAFGLFLSLNQSYDT 257
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ G+ ++ + +LY F+LG EL
Sbjct: 258 VFGGMKNMFISIGWLYYTFAVFLLGTEL 285
>gi|218513787|ref|ZP_03510627.1| putative ribonuclease protein [Rhizobium etli 8C-3]
Length = 161
Score = 95.3 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 60/130 (46%), Positives = 95/130 (73%)
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
+S + VA+PLAL Y R +FP + L I+++ RIY T++ L +GL+ +HL+LPA K +
Sbjct: 1 AAISILLVAVPLALDYARNWFPLFADTLDIVFSWRIYGTLVVLTVGLLVMHLWLPAGKRR 60
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ ++PGV+ T + W+ GA++F +Y+ TF+ Y+ YAGLAS+M L+FLYM+GV FI+GA
Sbjct: 61 VFDVIPGVLLTLLLWLAGALIFAYYLATFANYTATYAGLASVMIVLIFLYMVGVIFIIGA 120
Query: 267 ELNASMIIYY 276
E+NA++I +
Sbjct: 121 EINAALIKFR 130
>gi|186893372|ref|YP_001870484.1| ribonuclease BN [Yersinia pseudotuberculosis PB1/+]
gi|226737464|sp|B2JYL3|Y028_YERPB RecName: Full=UPF0761 membrane protein YPTS_0028
gi|186696398|gb|ACC87027.1| ribonuclease BN [Yersinia pseudotuberculosis PB1/+]
Length = 294
Score = 95.3 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 23 LYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFAEISIKLKAFIFANFIPA 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 83 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKIQRSLVFSFA 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ Y ++ ++ +++ V L+ + +++ I +L ++
Sbjct: 142 V---YWMVLTLGPILVGASMVISSYLLSLHWLAHARVDSMIDEI---LRVFPLLISWVSF 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G F YI F +Y +Y LA I +
Sbjct: 196 WLLYSVVPTVRVPARDALIGALVAALLFELGKKGFAMYITLFPSYQLIYGVLAVIPILFL 255
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y +
Sbjct: 256 WVYWSWCIVLLGAEITVTLGEYRAERH 282
>gi|319639500|ref|ZP_07994249.1| tRNA-processing ribonuclease BN [Neisseria mucosa C102]
gi|317399266|gb|EFV79938.1| tRNA-processing ribonuclease BN [Neisseria mucosa C102]
Length = 400
Score = 95.3 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 79/237 (33%), Gaps = 16/237 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWP 71
+ + F +E +A+ ++ + LL++ P + +A Q+ + +
Sbjct: 20 WFVVRRFDDERVPQVAASMTFTTLLALVPVLTVMVVIASAFPVFDQWSGEFVSFINRTIV 79
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + D I A L I ++ S + + + NR +RV R W +
Sbjct: 80 PQGADMVFDYI-NAFRDKATKLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNSQRPWMMQ 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + PL+L L+ R+ + + +
Sbjct: 139 --------------FLVYWALLTFGPLSLGVGLSVVIGQVQLVGGSEWLRVITAVSFITV 184
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L ++ F+P L G T LF Y+ F Y ++Y A++
Sbjct: 185 LLWGLYRFVPNRFVPASHALVGAAVTAFCLETARFLFAWYMGNFDGYKSIYGAFAAV 241
>gi|167590251|ref|ZP_02382639.1| putative ribonuclease BN [Burkholderia ubonensis Bu]
Length = 270
Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 93/261 (35%), Gaps = 13/261 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
MA+ I+ + S+ P +V +AG+ G V A + +
Sbjct: 1 MAASIAFYSAFSLAPMLVMVIAVAGWFYGDDAARGLVFQQAHQLIGNDAAASVQTIVQNA 60
Query: 86 L-AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMR-----SWYITRLISFGY 138
+ GL T+ + A +S +L +L+ + E R RLISFG
Sbjct: 61 HHSGNRGGLATLISFGALALGASATFSSLSAALSVIWPATESRWSSVLGLVRVRLISFGL 120
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
VL + L+ + A+ +V + + I + + L +
Sbjct: 121 VLGVAFLLIASLVL----DTAITFVGTWLWGDSPYIAITDLLQFLVGIAVLAGAFAALMK 176
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
FLP A+ G + I + G LF Y+ T ++ + S L++LY
Sbjct: 177 FLPDARVAWRDAAIGGTVSAILFSGGKKLFALYLAHAGT-ASAFGAAGSFAVLLMWLYFS 235
Query: 259 GVFFILGAELNASMIIYYWRK 279
+LGAE A+ R+
Sbjct: 236 AAVLLLGAEFAAARGAVRERR 256
>gi|240127522|ref|ZP_04740183.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae SK-93-1035]
gi|268685898|ref|ZP_06152760.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae SK-93-1035]
gi|268626182|gb|EEZ58582.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae SK-93-1035]
Length = 408
Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 84/243 (34%), Gaps = 11/243 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + I F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-DAFRDQANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V L + + A
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGVGISFMV--------GSVQDSVLSSGAQQWADALKTAAR 185
Query: 187 LALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
LA L++ ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASI 248
A++
Sbjct: 246 AAV 248
>gi|325135887|gb|EGC58499.1| YihY family protein [Neisseria meningitidis M0579]
gi|325203614|gb|ADY99067.1| YihY family protein [Neisseria meningitidis M01-240355]
Length = 406
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 87/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-NAFREQANRLTAIGSMMLVVTSLMLIRTIDNTFNRIWRVNSQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V + A + P L R AT+
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGVGISFMV-GSVQDAALASGAPQWSGAL------RTAATL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 187 TFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFA 246
Query: 247 SI 248
++
Sbjct: 247 AV 248
>gi|167850438|ref|ZP_02475946.1| putative ribonuclease [Burkholderia pseudomallei B7210]
Length = 280
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 100/263 (38%), Gaps = 13/263 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
S L++LY +LGAE
Sbjct: 257 GSFAVLLMWLYFSAAVLLLGAEF 279
>gi|91773378|ref|YP_566070.1| ribonuclease BN [Methanococcoides burtonii DSM 6242]
gi|91712393|gb|ABE52320.1| Ribonuclease BN [Methanococcoides burtonii DSM 6242]
Length = 320
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/272 (20%), Positives = 115/272 (42%), Gaps = 11/272 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
+ + D+ I+ ++ +DG + ++ +S +LS+ ++F ++L G FL T+
Sbjct: 44 FMGKLKDVALQTIKRWIADDGTSFSAALSFYLILSLPSLLLFSSSLGGMFLKVELLQATI 103
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYR 121
ID + E I Q+ + IS L + + N + +++ +
Sbjct: 104 IDYISPFADEEIINSFNLLFHQLPETSSLTFGLIISFLLFLWSAGNIFLQFQKTIDHMWG 163
Query: 122 VVEMRSWYITRLI-----SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V++ + + RL SF V + S+ L+I + + + + P L+
Sbjct: 164 VLDSKKGWSQRLFKKRISSFVAVFIFSLLLIISILAEIFLVVISNMLTIIHPLPLELMQY 223
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I + T L I++++ LP K KI I G T +G LF+ YI +S
Sbjct: 224 ISSI---VTFFVLIFFFIYLYMALPDKKVKIKYIGIGSFLTVFFITLGKHLFSLYIS-YS 279
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++T+Y + + + +++Y + L AE
Sbjct: 280 NFTTVYTKIGAFLAIFLWMYYSSIIVTLMAEF 311
>gi|257388488|ref|YP_003178261.1| ribonuclease BN [Halomicrobium mukohataei DSM 12286]
gi|257170795|gb|ACV48554.1| ribonuclease BN [Halomicrobium mukohataei DSM 12286]
Length = 263
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/249 (16%), Positives = 90/249 (36%), Gaps = 14/249 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ + + + +A+ I+ A +S+ P ++ +A LG F V+ V+
Sbjct: 3 IVRSVVTLARDRNVTFLAAGIAYYAFVSIVPLLLLAIAVASTLGGQAFADRVVAVLGRML 62
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+T + L + L + L + + Y S
Sbjct: 63 SASGQDLVTGALTDTAGRGTASL--VGFLVLLWSGLKLFRGLDQAFDEVYAAEVHTSLLQ 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ G V++ + L + + V V I L++ + ++ A ++ +
Sbjct: 121 Q--VRNGLVVVVGIALAVGTAVLVGIALSIQPWE---------IPLVNVFGTVALVVVIT 169
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + ++ LP + ILPG + WV+ + F Y + Y+ Y L +++
Sbjct: 170 LAFLPIYYVLPPVDVSLREILPGAVIAAGGWVLLQLGFRIYAASAGQYAA-YGILGAVLL 228
Query: 251 CLVFLYMLG 259
+ +LY
Sbjct: 229 FVTWLYFAS 237
>gi|197105078|ref|YP_002130455.1| ribonuclease BN [Phenylobacterium zucineum HLK1]
gi|196478498|gb|ACG78026.1| ribonuclease BN [Phenylobacterium zucineum HLK1]
Length = 304
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 88/277 (31%), Gaps = 11/277 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I A+ D +S +L++FP + + V
Sbjct: 25 ITGRALTRLWGRDVMLYTGGVSFFVMLAIFPALAILMGAYSLFFDPAQAARQAEHVARIM 84
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVEMRS 127
P+ E+L++ V + + S +A Y + G +AL L+ + + R
Sbjct: 85 PDAARLIFQKEMLRLSQVSHEAISLQSGVALVIGGYAAHRGFKALLAGLSFIHDEDKPRG 144
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYATM 186
+ L++ ++ L +S VF + L L +W
Sbjct: 145 FVGFNLLALWVLIAVFAGLGALSAVFFVFRILGETFD-----LRPLRGALWLYSEWTWAS 199
Query: 187 LALFIGLIFVHLFL-PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ G+ F++ + + + G + + Y+ + Y +
Sbjct: 200 AGMTAGMTFIYRWAMSSDPVDWRASTLGGAAAAGLCIFASWALGFYVEQIAQLGATYGSV 259
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII-YYWRKKP 281
A+++ L++L G L + + + R+ P
Sbjct: 260 ATVVIFLIWLSWNVNAVFFGGALATEVELALHTRRGP 296
>gi|240015883|ref|ZP_04722423.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae FA6140]
gi|240125009|ref|ZP_04737895.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae SK-92-679]
gi|254493038|ref|ZP_05106209.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae 1291]
gi|268683595|ref|ZP_06150457.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae SK-92-679]
gi|226512078|gb|EEH61423.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae 1291]
gi|268623879|gb|EEZ56279.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae SK-92-679]
Length = 408
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 84/243 (34%), Gaps = 11/243 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + I F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-DAFRDQANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V L + + A
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGVGISFMV--------GSVQDSVLSSGAQQWADALKTAAR 185
Query: 187 LALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
LA L++ ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASI 248
A++
Sbjct: 246 AAV 248
>gi|206890928|ref|YP_002249079.1| YihY family protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742866|gb|ACI21923.1| YihY family protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 265
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 60/255 (23%), Positives = 118/255 (46%), Gaps = 9/255 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-LAGFLGAHQFVPTVIDVVFGAWPEV 73
+++ F ++G ++S ++ ++LS+ P +F N L L + V V + +P +
Sbjct: 12 SLKDFYNDEGVFLSSSLAFFSILSIIPLSMFIVNILMNILQEERVVKFVYSKLITFFPAI 71
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I E+ ++LA +K + +IS + FS A+ SLN+ ++ + R + ++ L
Sbjct: 72 ELHMIK-ELRKILA--SKEISSISLILYGVFSLQLFTAIEFSLNKIFKTAKKRHFIMSLL 128
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+SF +LL + T+ I + + L L + + +F+
Sbjct: 129 MSFFIILLITFTVAASFAFTYLIRIFQPMIFSELSILLGFFL-----KYLLPFVLMFVIT 183
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ LP K K+ SIL G + T + + +F Y+V +T+Y L++ + L+
Sbjct: 184 TLLYKILPNKKIKLSSILIGALITTVLIEIAKYVFAFYVVKIIKINTLYGSLSTFLALLM 243
Query: 254 FLYMLGVFFILGAEL 268
+L+ FI GAEL
Sbjct: 244 WLFYGWAVFIYGAEL 258
>gi|262202456|ref|YP_003273664.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
gi|262085803|gb|ACY21771.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
Length = 337
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 98/262 (37%), Gaps = 23/262 (8%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
F ++ G +A+ I+ +S+FP ++ ++ G + + ++D P
Sbjct: 23 VAYKFFDDQGGYLAALITYYGFISLFPLLLVFTSVLGLVLEDNPELQERIVDSALSQIP- 81
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVV--EMRSWY 129
I D++ Q + L + + +A + + GV A++ ++N + V E +
Sbjct: 82 ----VIGDQLGQPGQLSGSTLAVVIGVVSAVYGALGVSVAIQNAMNIVWTVPRNERPNPI 137
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R + L+ + + AL V + ++ G T+L
Sbjct: 138 QVR--------VKGALLLATVGLVIIGLTALNGVSAAIDLGSDGRVLATVG----TLLLY 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASI 248
+F F A I +LPG + + W + T +I + S A +
Sbjct: 186 IAVFVFGFRFGTARDVSIRDVLPGAVGAAVGWQILQTFGTVFIQRVIANSSATTGVFAVV 245
Query: 249 MTCLVFLYMLGVFFILGAELNA 270
+ L FLY+ V ++ E NA
Sbjct: 246 LGLLAFLYIAAVMVVICLECNA 267
>gi|240114976|ref|ZP_04729038.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae PID18]
gi|268600644|ref|ZP_06134811.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID18]
gi|268584775|gb|EEZ49451.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID18]
Length = 408
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 84/243 (34%), Gaps = 11/243 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + I F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-DAFRDQANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V L + + A
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGVGISFMV--------GSVQDSVLSSGAQQWADALKTAAR 185
Query: 187 LALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
LA L++ ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASI 248
A++
Sbjct: 246 AAV 248
>gi|228469514|ref|ZP_04054509.1| ribonuclease BN [Porphyromonas uenonis 60-3]
gi|228308953|gb|EEK17622.1| ribonuclease BN [Porphyromonas uenonis 60-3]
Length = 479
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 101/270 (37%), Gaps = 9/270 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +Y AI+ F+++ + AS ++ LLS+ P + LA G T
Sbjct: 60 RRLYINTLKALYMAIKGFIDQRLSSHASALTYRTLLSIVPMLAIIVALAKGFGLQ---GT 116
Query: 62 VIDVVFGAWP--EVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
+ D + P + + I + L GL + + Y ++ + + N
Sbjct: 117 IYDFLMTYMPGHQSEVETIMGFVENYLGQVQGGLFLGVGLVLFLYTIFQLLDTVEQTFNV 176
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ V RS V+L + + + S + V + + L +
Sbjct: 177 IWGVPRGRSIGRKLTDYITMVVLLPILMTLSSGLTVMMATIQNTWFNDYIFFTPLWEFML 236
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
Y ++ +F G+ LP K + L + ++ V L+ I+ S Y
Sbjct: 237 KLFPYIILIFMFAGIFIA---LPNTHVKFVPALISGVIAGSAFQVLQALYVSGILWISKY 293
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +Y G A+I L++L ++ + A+L
Sbjct: 294 NAIYGGFAAIPLLLLWLQVVWTITLFSAKL 323
>gi|260911943|ref|ZP_05918508.1| YihY family protein [Prevotella sp. oral taxon 472 str. F0295]
gi|260633966|gb|EEX52091.1| YihY family protein [Prevotella sp. oral taxon 472 str. F0295]
Length = 440
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 106/263 (40%), Gaps = 6/263 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+V + ++ F +AS ++ S +L++ P + +A G +++
Sbjct: 33 MVLKRLVVTVKFFTTRSVTDLASALTYSTVLAIVPIVAVVFAIARGFGFSKYIEVWFRDA 92
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P A+ I + L G+ I + + + + + N ++V
Sbjct: 93 LSSQP-QAAETIIGFVNSYLVHTKGGVFLGIGLIFMLFTVLMLISNIEKAFNSIWQVQHP 151
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + T L + +V+ S V + + + ++ LG ++ ++ Y
Sbjct: 152 RSLFRTITDYLAMFFLVPIVIVVTSGVSIVMATFAQDINEYV-VLGPMMRLVITVMPYVL 210
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
M A+F+ L F+P K K + I + I+ + V + H + S+Y+ +Y
Sbjct: 211 MSAVFVCLFI---FMPNTKVKFSAAFFPGILSGIAMQILQVFYIHSQIFLSSYNAIYGSF 267
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
A++ ++++ + + GAEL
Sbjct: 268 AALPLFMLWVQISWTICLFGAEL 290
>gi|218247482|ref|YP_002372853.1| ribonuclease BN [Cyanothece sp. PCC 8801]
gi|257061182|ref|YP_003139070.1| ribonuclease BN [Cyanothece sp. PCC 8802]
gi|218167960|gb|ACK66697.1| ribonuclease BN [Cyanothece sp. PCC 8801]
gi|256591348|gb|ACV02235.1| ribonuclease BN [Cyanothece sp. PCC 8802]
Length = 322
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 108/289 (37%), Gaps = 20/289 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
+ I + ++D + +S A+ S+FP ++ ++ + ++ V
Sbjct: 20 QLFMGTIIKWQQDDCLEKGAALSYYAIFSLFPILLVILSIFSLILGSRTNIYEQLLAVTQ 79
Query: 68 GAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +L + + G+ L +S AL ++++ ++ + +
Sbjct: 80 RVLPPESYPIVVVTLLDLTKSSISAGIIGFGILFI--TASRIFAALDQTVSKIWKHPDQK 137
Query: 127 S-----------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG---- 171
+ ++++F VL + +++ +AI + L ++ L
Sbjct: 138 PLNLSWKAMILKYIRDKILAFFLVLSTAFLILLSLLSNIAIKVILEIIKNVESKLTWIQV 197
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ L+ + ++ T + L++ ++ + LP+ K I G I T + + L +
Sbjct: 198 DEALLWNSLQVSLTFILLYLVVMVLFKILPSTSVKWSDIWLGAILTVTLYSLLQKLVSSG 257
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ Y + M L+++++ F LG E + ++
Sbjct: 258 VIRIGEQFRAYGVIGGFMMLLLWIFLTCQIFFLGCEFTYVYTHLFGSRR 306
>gi|58697944|ref|ZP_00372948.1| ribonuclease, BN family [Wolbachia endosymbiont of Drosophila
simulans]
gi|58535551|gb|EAL59534.1| ribonuclease, BN family [Wolbachia endosymbiont of Drosophila
simulans]
Length = 200
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 72/168 (42%), Gaps = 10/168 (5%)
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P+ I + I ++++ P + L T++ + A + +S+ +E LR LN+AY+V
Sbjct: 36 FIIDNMPQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKAYKVPV 95
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ + R++S L+ ++ + + +P+ + + + R
Sbjct: 96 SPPYILRRVLSILQFLVITLIITLTIVFSTLVPMLIDFSYQGLSY----------TRYLL 145
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
LF + +++ LP K + + PG I W + A F Y+
Sbjct: 146 IEFVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQYL 193
>gi|167573492|ref|ZP_02366366.1| putative ribonuclease [Burkholderia oklahomensis C6786]
Length = 307
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 99/260 (38%), Gaps = 13/260 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
+A + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 NAFKRFSTDRCSAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGIAALISFAMLAVGASATFASLNTALSVIWPATGTRASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RL+SFG VL + L++ + A+ +V ++ ++I +
Sbjct: 142 LGLVRVRLVSFGLVLGVAFLLIVSLVL----DTAITFVGRWLWGNSPYVVIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ I + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSIRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFILG 265
S L++LY +LG
Sbjct: 257 GSFAVLLMWLYFSAAVLLLG 276
>gi|295676292|ref|YP_003604816.1| ribonuclease BN [Burkholderia sp. CCGE1002]
gi|295436135|gb|ADG15305.1| ribonuclease BN [Burkholderia sp. CCGE1002]
Length = 300
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 102/271 (37%), Gaps = 13/271 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFG 68
++ DA F+ + + + I+ + S+ P ++ + G+ G + +
Sbjct: 20 NVASDAASRFLSDRCAMLGASIAFYSAFSLAPTLLLVLAVIGWIFGRDAAQGRLFEQARQ 79
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEMRS 127
A+ + D + G+ +LA +S +L +L+ + +
Sbjct: 80 LVGNDAARAMQDIVAHAHYAGGSGVAAAFSLALLLVGASATFSSLNTALDIVFAAHPRKG 139
Query: 128 W------YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
RL+S G ++ S LV+ V A+ + L ++ +
Sbjct: 140 IAGLALLVRARLVSIGLLIGLSFLLVVSLVV----DAAIQTLGGALFGNSALGIVADVLQ 195
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L +GL + +LP A L G + + G LF+ Y+V T + +
Sbjct: 196 SLLGFVILAVGLGALIKWLPDAAVPFRPALVGGAIASLLFTAGRHLFSFYLVHAGT-AGV 254
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ S+ +++LY F+ GAE+ AS+
Sbjct: 255 FGAAGSLAVLMMWLYFCAAVFLFGAEVAASL 285
>gi|121596477|ref|YP_991269.1| putative ribonuclease BN [Burkholderia mallei SAVP1]
gi|166999452|ref|ZP_02265291.1| putative ribonuclease BN [Burkholderia mallei PRL-20]
gi|121224275|gb|ABM47806.1| putative ribonuclease BN [Burkholderia mallei SAVP1]
gi|243064515|gb|EES46701.1| putative ribonuclease BN [Burkholderia mallei PRL-20]
Length = 307
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIDNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 257 GSFAVLLMWLYFSAAVLLL 275
>gi|90407862|ref|ZP_01216038.1| ribonuclease BN [Psychromonas sp. CNPT3]
gi|90311037|gb|EAS39146.1| ribonuclease BN [Psychromonas sp. CNPT3]
Length = 293
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 108/270 (40%), Gaps = 18/270 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF--GAWPE 72
+ +++ A H++ LLS+ P + + + +I+ + P
Sbjct: 20 LYQRCHQDNIKVPAGHLAYVTLLSIVPCLAVIFYMLSAFPMFSDLNKIIEDLIYNNFLPT 79
Query: 73 VIAKP---ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
++ I + G+ ++ +A + + ++NR +R RSW
Sbjct: 80 SGDALKVHMSGFIENTKKMSMMGIASLMVIALLL-----ISTIDQTINRIWRCSTKRSWV 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + +L+ +++ + ++ L ++ F ++G LL + +
Sbjct: 135 --QAFTIYWTILSLGPIILGGSIALSSYLFAIVQQRGFLSVGQQLLS------FMPFIVS 186
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ V+ +P K + L G + + +G LF+ YI+ F + +Y LA I
Sbjct: 187 WLAFSGVYALVPRQKVNVRYALIGGFSSAVLLNLGTDLFSLYIINFPSQQIIYGALAVIP 246
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
V++Y + + GAE+ S+ ++ ++
Sbjct: 247 ILFVWIYFNWLIVLFGAEITVSIDEFFEKE 276
>gi|170717323|ref|YP_001784434.1| ribonuclease BN [Haemophilus somnus 2336]
gi|226737448|sp|B0UTI5|Y1104_HAES2 RecName: Full=UPF0761 membrane protein HSM_1104
gi|168825452|gb|ACA30823.1| putative ribonuclease BN [Haemophilus somnus 2336]
Length = 288
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 103/274 (37%), Gaps = 6/274 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M + + F + A +++ S L++ P I+ ++ ++
Sbjct: 1 MSNLCRNIKVFFKVFLYRFKQNKLNQAAGYLTYSTTLALVPLIMVFFSVFAAFPVFNEIT 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + I Q + +K + + ++ + + ++ +LN
Sbjct: 61 GELKQFIFTNFAPSTGDAVGEYIDQFVNN-SKQMSAVGIISLIVVALMLIHSIDRTLNSI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R + I + + L + + + + Y + L + ++
Sbjct: 120 WLDTSVRPAIFSFAIYWLILTLGPIVIATSIGISTYVTKFATYTFEQDLGLSVGIKLL-- 177
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ +++ +P K I+ G + + + +G FT YI TF +Y
Sbjct: 178 --SLMPFFLTWFIFTVLYMVVPNKKVSIIHSAAGALIAAVFFTLGKQAFTWYITTFPSYQ 235
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y +A++ L+++ + +LGA+L+A +
Sbjct: 236 LIYGAMATLPIMLLWIQLSWTAVLLGAQLSAVLA 269
>gi|288802213|ref|ZP_06407653.1| YihY family protein [Prevotella melaninogenica D18]
gi|288335180|gb|EFC73615.1| YihY family protein [Prevotella melaninogenica D18]
Length = 448
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 101/267 (37%), Gaps = 3/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R F Y ++ F D A + +S S ++++ P +A G QF+
Sbjct: 27 RNMLIRQFQKFYLTVKFFFVRDHAASTAQLSFSTIMAIVPIASMIFAIANGFGFGQFLEK 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ A PE + ++ I + Y + + + + + ++
Sbjct: 87 QFREMLSAQPEAATWLLKLTQSYLVHAKTGLFIGIGLMIMFYSVFSLIRTVETTFDNIWQ 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R + + L ++++I+S + + ++V + ++ R
Sbjct: 147 VKDSRPLSRIVIDYTALMFLVPISIIILSGLSIYF---YSFVENLNGLRFLGTIASFSLR 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + I +++F+P AK KI + + I+ + ++ H + ++Y+ +
Sbjct: 204 FLVPWAILTLMFIVLYVFMPNAKVKITKTVAPAMIASIAMLCLQAVYIHGQIFLTSYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A++ ++++ + AEL
Sbjct: 264 YGSFAALPLFMLWILASWYICLFCAEL 290
>gi|52424087|ref|YP_087224.1| ribonuclease BN [Mannheimia succiniciproducens MBEL55E]
gi|67460653|sp|Q65WM1|Y032_MANSM RecName: Full=UPF0761 membrane protein MS0032
gi|52306139|gb|AAU36639.1| Rbn protein [Mannheimia succiniciproducens MBEL55E]
Length = 287
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 105/274 (38%), Gaps = 10/274 (3%)
Query: 1 MREYFCIVFDIIYDAIE-HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQF 58
MR +++ F + A ++ S +L++ P ++ + ++
Sbjct: 1 MRRVVMTQLKLLFAVFYCRFQQNKLTQAAGALTYSTMLAIVPLVMVVFAIFSAFPMFNEA 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ +F + + I + + +K + + ++ + + + ++N
Sbjct: 61 AAELKTFIFDNFSPSAGDTVGQYIDEFVVN-SKSMSAVGIISLIAVALLLINQIDRTIND 119
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + R++ + I + + L + + + + I +A+ G LL
Sbjct: 120 IWN-SKNRNFIFSMTIYWTLLTLGPIFIGMSFAINTYIRSIIAFEGDLGLPFGLKLLS-- 176
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ L ++ ++ +P K G + I + +G F Y+ TF +Y
Sbjct: 177 ----FVPFLLTWLSFSLIYTLVPNTKVNFRYAAVGALVAAIFFTLGKKAFAWYMATFPSY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y +A++ L+++ + +F +LGA+L A +
Sbjct: 233 QLIYGAMATLPITLLWIQLSWLFILLGAQLTAVL 266
>gi|225077190|ref|ZP_03720389.1| hypothetical protein NEIFLAOT_02245 [Neisseria flavescens
NRL30031/H210]
gi|224951481|gb|EEG32690.1| hypothetical protein NEIFLAOT_02245 [Neisseria flavescens
NRL30031/H210]
Length = 400
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/237 (17%), Positives = 79/237 (33%), Gaps = 16/237 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWP 71
+ + F EE +A+ ++ + LL++ P + +A Q+ I +
Sbjct: 20 WFVVRRFNEERVPQVAASMTFTTLLALVPVLTVMVAIASAFPVFDQWSGEFISFINRTIV 79
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + D I A L I ++ S + + + NR +RV R W +
Sbjct: 80 PQGADMVFDYI-NAFRDKATNLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNSQRPWMMQ 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + PL+L ++ R T+ + +
Sbjct: 139 --------------FLVYWALLTFGPLSLGVGLSVVIGQVQVVGGSEWLRGITTVSFITV 184
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L ++ F+P L G T LF Y+ F Y ++Y A++
Sbjct: 185 LLWGLYRFVPNRFVPANHALVGAAVTAFCLETARFLFAWYMGNFDGYKSIYGAFAAV 241
>gi|53716329|ref|YP_106262.1| putative ribonuclease BN [Burkholderia mallei ATCC 23344]
gi|124381375|ref|YP_001025680.1| putative ribonuclease BN [Burkholderia mallei NCTC 10229]
gi|217422203|ref|ZP_03453706.1| putative ribonuclease BN [Burkholderia pseudomallei 576]
gi|237509729|ref|ZP_04522444.1| YihY family protein [Burkholderia pseudomallei MSHR346]
gi|238563035|ref|ZP_00439487.2| YihY family protein [Burkholderia mallei GB8 horse 4]
gi|254359240|ref|ZP_04975512.1| putative ribonuclease BN [Burkholderia mallei 2002721280]
gi|52422299|gb|AAU45869.1| putative ribonuclease BN [Burkholderia mallei ATCC 23344]
gi|148028427|gb|EDK86387.1| putative ribonuclease BN [Burkholderia mallei 2002721280]
gi|217394434|gb|EEC34453.1| putative ribonuclease BN [Burkholderia pseudomallei 576]
gi|235001934|gb|EEP51358.1| YihY family protein [Burkholderia pseudomallei MSHR346]
gi|238521458|gb|EEP84909.1| YihY family protein [Burkholderia mallei GB8 horse 4]
gi|261826285|gb|ABM99270.2| putative ribonuclease BN [Burkholderia mallei NCTC 10229]
Length = 307
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 257 GSFAVLLMWLYFSAAVLLL 275
>gi|318603752|emb|CBY25250.1| ribonuclease BN [Yersinia enterocolitica subsp. palearctica Y11]
Length = 275
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P + L + + +F +
Sbjct: 2 LYTRIDKDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPMFADISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKVHRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S V + L+L ++ + +I +L ++
Sbjct: 121 V-YWMVLTLGPILVGASMVISSYLLSLQWLAN-----ARVDSMIDETLRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDALIGALVAALFFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRAQRH 261
>gi|59800586|ref|YP_207298.1| fused ribonuclease BN/uncharacterized domain-containing protein
[Neisseria gonorrhoeae FA 1090]
gi|194097757|ref|YP_002000798.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae NCCP11945]
gi|239998260|ref|ZP_04718184.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae 35/02]
gi|260441209|ref|ZP_05795025.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae DGI2]
gi|268594115|ref|ZP_06128282.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae 35/02]
gi|291044543|ref|ZP_06570252.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae DGI2]
gi|59717481|gb|AAW88886.1| putative tRNA processing exoribonuclease BN [Neisseria gonorrhoeae
FA 1090]
gi|193933047|gb|ACF28871.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae NCCP11945]
gi|268547504|gb|EEZ42922.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae 35/02]
gi|291011437|gb|EFE03433.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae DGI2]
gi|317163543|gb|ADV07084.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 408
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 86/242 (35%), Gaps = 9/242 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + I F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + NR +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-DAFRDQANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + F+ + + + + L A +
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGV-GISFMVGSVQDSVLSSGAQQWADALKT------AARL 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ F+P G + T LFT Y+ F Y ++Y A
Sbjct: 187 AFMTLLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAFA 246
Query: 247 SI 248
++
Sbjct: 247 AV 248
>gi|56479497|ref|YP_161086.1| hypothetical protein ebA7158 [Aromatoleum aromaticum EbN1]
gi|81356111|sp|Q5NXM9|Y4060_AZOSE RecName: Full=UPF0761 membrane protein AZOSEA40600
gi|56315540|emb|CAI10185.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 407
Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/277 (18%), Positives = 105/277 (37%), Gaps = 15/277 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VV 66
+ + F+ +A ++ + LL++ P + L A + + ++
Sbjct: 8 REFMRLLTGRFLATRCPQVAGSLAFTTLLAIVPLLTVIIALFSNFPAFSRLGESLRTFLL 67
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + I Q + A GL I + + + + N + V R
Sbjct: 68 ENLLPDRAGQIIATYAFQ-FSQQAAGLTLIGTVLLVLTALMLLMTIDHVFNHIWGVRRPR 126
Query: 127 SWYITRLISFGYVLLASVTL---VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
++ + + L + L V+ + VA +ALA G +
Sbjct: 127 PLLTRLMVHWFALTLGPLALGGSVLATGHLVATSIALA---------GEGSWVGATFARL 177
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L ++ +P +++ L G I I +V+ LF +IV TY+ +Y
Sbjct: 178 VPTVLLGSLFSVLYYAVPNHPVRMLHALAGGIAAAIVFVLMQRLFGLFIVRIPTYTLIYG 237
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A + LV+LY+ V +LGA L+A++ ++ R +
Sbjct: 238 TFAVLPIFLVWLYLSWVVILLGAALSATLPSFFERAR 274
>gi|218440878|ref|YP_002379207.1| ribonuclease BN [Cyanothece sp. PCC 7424]
gi|218173606|gb|ACK72339.1| ribonuclease BN [Cyanothece sp. PCC 7424]
Length = 306
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/290 (16%), Positives = 111/290 (38%), Gaps = 20/290 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
+ + + ++ M + ++ L S+FP ++ ++ F ++ +
Sbjct: 16 QLFIRTLLKWQQDQCLEMGAALAYYVLFSLFPALLVILSIFSFFLGHDTDVYNQILKLAK 75
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I D ++Q + + G + + +S+ L SL++ ++V ++
Sbjct: 76 EGLPYSAFIIIEDALIQ-MTKSSLGASIVGFSILFFSASHAFAFLSRSLDKIWQVQKIYP 134
Query: 128 -----------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLL 174
+ R +F +L +S V++ +A + + + L
Sbjct: 135 HQQNVITIISTYIQYRFFAFLLLLGSSGVFVLLILFDIANKIFINLLENVEETKHLVQAY 194
Query: 175 LIIWNGRIYA--TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF--TH 230
W G++ A T L LF+ ++ V FLP+ K K I G + T I + L +
Sbjct: 195 ENFWLGKVQAVHTFLILFLIVMIVFKFLPSTKIKWGDIWLGSLLTAIILFLLQKLVSNSF 254
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ + Y + +M L+++Y+ F LG+E + ++
Sbjct: 255 IVINITRQFQYYGVIGGVMVLLLWIYLTCEIFFLGSEFTYIYAQLFGSRR 304
>gi|53722698|ref|YP_111683.1| ribonuclease [Burkholderia pseudomallei K96243]
gi|126456974|ref|YP_001076309.1| putative ribonuclease BN [Burkholderia pseudomallei 1106a]
gi|254186260|ref|ZP_04892778.1| putative ribonuclease BN [Burkholderia pseudomallei Pasteur 52237]
gi|254262938|ref|ZP_04953803.1| putative ribonuclease BN [Burkholderia pseudomallei 1710a]
gi|52213112|emb|CAH39151.1| putative ribonuclease [Burkholderia pseudomallei K96243]
gi|126230742|gb|ABN94155.1| putative ribonuclease BN [Burkholderia pseudomallei 1106a]
gi|157933946|gb|EDO89616.1| putative ribonuclease BN [Burkholderia pseudomallei Pasteur 52237]
gi|254213940|gb|EET03325.1| putative ribonuclease BN [Burkholderia pseudomallei 1710a]
Length = 307
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 257 GSFAVLLMWLYFSAAVLLL 275
>gi|332159658|ref|YP_004296235.1| ribonuclease BN [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325663888|gb|ADZ40532.1| ribonuclease BN [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330860246|emb|CBX70564.1| tRNA-processing ribonuclease BN [Yersinia enterocolitica W22703]
Length = 296
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P + L + + +F +
Sbjct: 23 LYTRIDKDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPMFADISIKLKAFIFANFMPA 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 83 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKVHRSLVFSFA 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S V + L+L ++ + +I +L ++
Sbjct: 142 V-YWMVLTLGPILVGASMVISSYLLSLQWLAN-----ARVDSMIDETLRLFPLLISWVSF 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G FT YI F +Y +Y LA I +
Sbjct: 196 WLLYSVVPTVRVPARDALIGALVAALFFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 255
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 256 WVYWSWCIVLLGAEITVTLGEYRAQRH 282
>gi|285017291|ref|YP_003375002.1| tRNA-processing ribonuclease bn (rnase bn) protein [Xanthomonas
albilineans GPE PC73]
gi|283472509|emb|CBA15014.1| putative trna-processing ribonuclease bn (rnase bn) protein
[Xanthomonas albilineans]
Length = 424
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 106/265 (40%), Gaps = 8/265 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
+ F+++ + A+ ++ + + ++ P V + +++ + D +F +
Sbjct: 27 LWQRFLDDRLFQAAASLAYTTIFALVPLAVVVFGVLSAFPVFNEWSDQLSDYIFSHFVPA 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + + Q + A L T +A + ++ + N+ +RVV R
Sbjct: 87 AARSVEAYLRQ-FSASAGQLTTAGVIALMVSLLITLHSIEQTFNQIWRVVSARPQLSR-- 143
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+++ +V + ++ ++ + + A +L + +
Sbjct: 144 ----FLVYWTVLTLGALLAAASLAVSARFFALPLFKTSQGQWLAQLVLSMAPVLIECVCI 199
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
V+ +P ++ LPG + + + + Y+ F +Y +Y +A + L+
Sbjct: 200 TLVYRVVPHHTVRLRHALPGALLAVVLLELVKCGLSLYLGGFQSYQRIYGTVAFVPIFLL 259
Query: 254 FLYMLGVFFILGAELNASMIIYYWR 278
++YM + +LGA +++S+ + ++
Sbjct: 260 WIYMSWIAILLGASVSSSISAFRYQ 284
>gi|167566378|ref|ZP_02359294.1| putative ribonuclease [Burkholderia oklahomensis EO147]
Length = 304
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 99/260 (38%), Gaps = 13/260 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
+A + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 NAFKRFSTDRCSAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGIAALISFAMLAVGASATFASLNTALSVIWPATGTRASSV 138
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RL+SFG VL + L++ + A+ +V ++ ++I +
Sbjct: 139 LGLVRVRLVSFGLVLGVAFLLIVSLVL----DTAITFVGRWLWGNSPYVVIGNLLQFSIG 194
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ I + G I + + + G LF Y+ T ++ +
Sbjct: 195 IAVLAFAFGTLMKFLPDARVSIRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 253
Query: 246 ASIMTCLVFLYMLGVFFILG 265
S L++LY +LG
Sbjct: 254 GSFAVLLMWLYFSAAVLLLG 273
>gi|307544875|ref|YP_003897354.1| ribonuclease BN [Halomonas elongata DSM 2581]
gi|307216899|emb|CBV42169.1| ribonuclease BN, putative [Halomonas elongata DSM 2581]
Length = 309
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 99/265 (37%), Gaps = 4/265 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + F+ G +A + + LLS+ P L + + + V+ +
Sbjct: 25 WRVLTSFLRNRGILLAGGVGYNVLLSIVPLFALLVVLLAGVVDERQLMGVLSIQVRHLTP 84
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM---RSWY 129
A+ + D + +L + + FSS L +L + + RS +
Sbjct: 85 AYAEVVLDAVRSLLD-SRDAIGILGIPVLLVFSSFAFRMLEDALAIIFHAPDTHTDRSVW 143
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
++ L+ + ++L+ L+ ++ + + A L + + + +
Sbjct: 144 VSVLMPYAFMLVLGAGLLSLTLMVSLVNAVNAVWMALLGRELPLSGLSGPMLNLTSFVGV 203
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ ++ +P + + L G + W +L Y S + +Y LA+++
Sbjct: 204 FLLFSAIYKVMPVVRIALHRALVGGFVAALLWEGARLLLIFYFTNLSFVNAVYGSLATLI 263
Query: 250 TCLVFLYMLGVFFILGAELNASMII 274
L+ L + + +LGA++ A +
Sbjct: 264 VILLILEVGAIILLLGAQVIAELER 288
>gi|327539624|gb|EGF26232.1| Ribonuclease BN [Rhodopirellula baltica WH47]
Length = 603
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 85/241 (35%), Gaps = 16/241 (6%)
Query: 48 NLAGFLGAHQFVP-TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--------ISA 98
+AG+ + VID + I Q L + +
Sbjct: 211 TIAGYPPTAEDAAGEVIDAEEIEGKAEADDQAREIIRQTLHGATSKIASLDFASIGVFGL 270
Query: 99 LAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
L Y + +A NR + R R ++ + ++ + ++ ++++ +
Sbjct: 271 LLFIYAAVALADATEYLFNRIFDAPTQRP-IHLR-VAVHWSIITLGSGLLALSLYMSAQV 328
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
+F LG +W + ++LA ++ L ++ +P + + + G +
Sbjct: 329 I-----DWFGNLGAGSGPVWILQHALSLLAAWVLLFLLYALMPNTHVSVRAAVMGSAVSA 383
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ W F Y+ T Y +Y + I L+++Y+ + + G L ++ +
Sbjct: 384 VLWEFAKYGFQIYVTTAVPYLELYGSIGVIPLFLLWIYLTWLIVLFGLILTYTLQTVRGK 443
Query: 279 K 279
+
Sbjct: 444 E 444
>gi|32474234|ref|NP_867228.1| ribonuclease BN [Rhodopirellula baltica SH 1]
gi|32444772|emb|CAD74773.1| probable ribonuclease BN [Rhodopirellula baltica SH 1]
Length = 577
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 85/241 (35%), Gaps = 16/241 (6%)
Query: 48 NLAGFLGAHQFVP-TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--------ISA 98
+AG+ + VID + I Q L + +
Sbjct: 185 TIAGYPPTAEDAAGEVIDAEEIEGKAEADDQAREIIRQTLHGATSKIASLDFASIGVFGL 244
Query: 99 LAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
L Y + +A NR + R R ++ + ++ + ++ ++++ +
Sbjct: 245 LLFIYAAVALADATEYLFNRIFDAPTQRP-IHLR-VAVHWSIITLGSGLLALSLYMSAQV 302
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
+F LG +W + ++LA ++ L ++ +P + + + G +
Sbjct: 303 I-----DWFGNLGAGSGPVWILQHALSLLAAWVLLFLLYALMPNTHVSVRAAVMGSAVSA 357
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ W F Y+ T Y +Y + I L+++Y+ + + G L ++ +
Sbjct: 358 VLWEFAKYGFQIYVTTAVPYLELYGSIGVIPLFLLWIYLTWLIVLFGLILTYTLQTVRGK 417
Query: 279 K 279
+
Sbjct: 418 E 418
>gi|126442603|ref|YP_001063408.1| putative ribonuclease BN [Burkholderia pseudomallei 668]
gi|134278383|ref|ZP_01765097.1| putative ribonuclease BN [Burkholderia pseudomallei 305]
gi|254193794|ref|ZP_04900226.1| putative ribonuclease BN [Burkholderia pseudomallei S13]
gi|254201145|ref|ZP_04907510.1| putative ribonuclease BN [Burkholderia mallei FMH]
gi|254205115|ref|ZP_04911468.1| putative ribonuclease BN [Burkholderia mallei JHU]
gi|126222094|gb|ABN85599.1| putative ribonuclease BN [Burkholderia pseudomallei 668]
gi|134250167|gb|EBA50247.1| putative ribonuclease BN [Burkholderia pseudomallei 305]
gi|147748757|gb|EDK55832.1| putative ribonuclease BN [Burkholderia mallei FMH]
gi|147754701|gb|EDK61765.1| putative ribonuclease BN [Burkholderia mallei JHU]
gi|169650545|gb|EDS83238.1| putative ribonuclease BN [Burkholderia pseudomallei S13]
Length = 304
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 138
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 139 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 194
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 195 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 253
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 254 GSFAVLLMWLYFSAAVLLL 272
>gi|294666747|ref|ZP_06731982.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292603492|gb|EFF46908.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 299
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 101/274 (36%), Gaps = 19/274 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F+E D A+ +S ALLS+ P +V L L ++ +
Sbjct: 3 LLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQIGQLAGGSA 61
Query: 75 AKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMR-----S 127
A+ I P G S L ++ L+ +LN +R + R +
Sbjct: 62 AEVAQTVIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGLMA 121
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ SFG +L L++ A+ + A + PA+G T+
Sbjct: 122 WLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG----------YVTTLA 171
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ F++ +LP G + T + + +G YI T + S Y + +
Sbjct: 172 LYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSA-YGSMGT 230
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ LV++Y V F +GA + A + +
Sbjct: 231 LVILLVWMYYASVVFFVGALITAVIDERVRSHRK 264
>gi|198283685|ref|YP_002220006.1| ribonuclease BN [Acidithiobacillus ferrooxidans ATCC 53993]
gi|198248206|gb|ACH83799.1| ribonuclease BN [Acidithiobacillus ferrooxidans ATCC 53993]
Length = 294
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 109/269 (40%), Gaps = 11/269 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VV 66
+F I+ A F +D A ++ + L + P V G +L +G +D +V
Sbjct: 33 MFYRIFRAWHGFWNDDCIDRAGLLAYTTLFGLIPLAVLGFSLWNLVGFSLLHRAQVDDLV 92
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
++ I ++ + A A+ + L + + A+ N + V
Sbjct: 93 LRSFVPQTGGAILRQVNSIAARGAQ-MGLFGLLGLGITAILLLHAVERHFNAIWGV--TP 149
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ R++ + +L+A + + + L P L +L + T
Sbjct: 150 TCLWCRILRYMAMLVAGPLGIALILPLLGPLQPLLVYLAHIPLLPPVLSHV------LTF 203
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + + + ++ LP+A ++ + G + T I + + ++ Y+ FST+ T+Y L
Sbjct: 204 LVVTVMMGLLYKILPSAPTRWQDVFLGGVSTAILFEISKMVLAGYL-QFSTFETLYGALG 262
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L++LYM + GAE+ A+ + +
Sbjct: 263 AFPVFLLWLYMAWASVLFGAEMAAAGMTH 291
>gi|282858887|ref|ZP_06268028.1| YihY family protein [Prevotella bivia JCVIHMP010]
gi|282588348|gb|EFB93512.1| YihY family protein [Prevotella bivia JCVIHMP010]
Length = 446
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/258 (17%), Positives = 101/258 (39%), Gaps = 5/258 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+Y + W A+ ++ + ++++ P +A G ++ +F P
Sbjct: 39 LYLVFTGLFVDKHWGYAAQLTYNTMMALIPMFAAIIAIARGFGFEDYIVEWCKHIFANQP 98
Query: 72 EVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
AK + + + G+ IS + Y + + + N + V + RS
Sbjct: 99 -NTAKVVVNLAKSYIDYTHTGVVLGISLVWMLYSVISLFNNIEVVFNGIWGVKKERSVGR 157
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ +TL+++S + + L + F L LL + + L
Sbjct: 158 AITDYVSILIFLPLTLILLSGLSIFFQSILVNLPN-FKVLTPLLQGLIGFILPLA--ILT 214
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I I ++ LP K +I + + I +V ++ H+ + F++Y+ +Y LA++
Sbjct: 215 IIFILMYTLLPNTKVRISMVWLPALLAAIGIIVIQNVYIHFQILFASYNLIYGSLAALPL 274
Query: 251 CLVFLYMLGVFFILGAEL 268
+++L + I AEL
Sbjct: 275 LMLWLQLSWYICIGFAEL 292
>gi|242311868|ref|ZP_04810885.1| putative ribonuclease BN [Burkholderia pseudomallei 1106b]
gi|254185027|ref|ZP_04891616.1| putative ribonuclease BN [Burkholderia pseudomallei 1655]
gi|184215619|gb|EDU12600.1| putative ribonuclease BN [Burkholderia pseudomallei 1655]
gi|242135107|gb|EES21510.1| putative ribonuclease BN [Burkholderia pseudomallei 1106b]
Length = 304
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 138
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 139 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 194
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 195 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 253
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 254 GSFAVLLMWLYFSAAVLLL 272
>gi|313202033|ref|YP_004040691.1| cyclic nucleotide-binding protein [Methylovorus sp. MP688]
gi|312441349|gb|ADQ85455.1| cyclic nucleotide-binding protein [Methylovorus sp. MP688]
Length = 426
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 110/268 (41%), Gaps = 9/268 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFP-FIVFGANLAGFLGAHQFVP 60
R + F I + + F +G+++++ +S A+ ++ P ++ L+ + + +
Sbjct: 26 RRRYRTPFFIFRETLSAFQLHNGFSISASLSFYAMFALIPMALLIFFMLSHLVVSSNYAI 85
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ ++ + I E+ V A A + + ALR + +
Sbjct: 86 VKLAILTSNLVPKFSHRIMIEVYNVSKHQAV-WGAFGMFALFWIVTPLAGALRSAFHTIA 144
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+VE S+ + ++ + ++++ F+F + L L V FF +I N
Sbjct: 145 SMVEEPSFIKRKFKD----VIGVLGILLLFFIFTLMGLGLEKVIDFFNPSATHTKLIDN- 199
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++++ + + + A+ + +IL G T I W+ F ++ +Y T
Sbjct: 200 --VSSIVICTVLIAIFYRIFFPARISLKNILIGSTITGIMWIAMRPAFGLFLSLNQSYDT 257
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ G+ ++ + +LY F+LG EL
Sbjct: 258 VFGGMKNMFISIGWLYYTFAVFLLGTEL 285
>gi|113460838|ref|YP_718905.1| ribonuclease BN [Haemophilus somnus 129PT]
gi|123327225|sp|Q0I2U0|Y693_HAES1 RecName: Full=UPF0761 membrane protein HS_0693
gi|112822881|gb|ABI24970.1| tRNA-processing RNAse BN [Haemophilus somnus 129PT]
Length = 288
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 103/274 (37%), Gaps = 6/274 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M + + F + A +++ S L++ P I+ ++ ++
Sbjct: 1 MSNLCRNIKVFFKVFLYRFKQNKLNQAAGYLTYSTTLALVPLIMVFFSVFAAFPVFNEIT 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + I Q + +K + + ++ + + ++ +LN
Sbjct: 61 GELKQFIFTNFAPSTGDAVGEYIDQFVNN-SKQMSAVGIISLIVVALMLIHSIDRTLNSI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R + I + + L + + + + Y + L + ++
Sbjct: 120 WLDTSVRPAIFSFAIYWLILTLGPIVIATSIGISTYVTKFATYTFEQDFGLSVGIKLL-- 177
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ +++ +P K I+ G + + + +G FT YI TF +Y
Sbjct: 178 --SLMPFFLTWFIFTVLYMVVPNKKVSIIHSAAGALIAAVFFTLGKQAFTWYITTFPSYQ 235
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y +A++ L+++ + +LGA+L+A +
Sbjct: 236 LIYGAMATLPIMLLWIQLSWTAVLLGAQLSAVLA 269
>gi|294626489|ref|ZP_06705088.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292599179|gb|EFF43317.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 299
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 101/274 (36%), Gaps = 19/274 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F+E D A+ +S ALLS+ P +V L L ++ +
Sbjct: 3 LLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQIGQLAGGSA 61
Query: 75 AKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMR-----S 127
A+ I P G S L ++ L+ +LN +R + R +
Sbjct: 62 AEVAQTVIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGLMA 121
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ SFG +L L++ A+ + A + PA+G T+
Sbjct: 122 WLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG----------YVTTLA 171
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ F++ +LP G + T + + +G YI T + S Y + +
Sbjct: 172 LYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSA-YGSMGT 230
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ LV++Y V F +GA + A + +
Sbjct: 231 LVILLVWMYYASVVFFVGALITAVIDERVRSHRK 264
>gi|21244599|ref|NP_644181.1| ribonuclease BN [Xanthomonas axonopodis pv. citri str. 306]
gi|21110279|gb|AAM38717.1| ribonuclease BN [Xanthomonas axonopodis pv. citri str. 306]
Length = 299
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 101/274 (36%), Gaps = 19/274 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F+E D A+ +S ALLS+ P +V L L ++ +
Sbjct: 3 LLNRFIEIDVMTQAASLSFYALLSLAPLLVLLLWLTASL-YPPAQEALVQQIGQLAGGSA 61
Query: 75 AKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMR-----S 127
A+ I P G S L ++ L+ +LN +R + R +
Sbjct: 62 AEVAQTVIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGLMA 121
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ SFG +L L++ A+ + A + PA+G T+
Sbjct: 122 WLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLPAVG----------YVTTLA 171
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ F++ +LP G + T + + +G YI T + S Y + +
Sbjct: 172 LYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSA-YGSMGT 230
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ LV++Y V F +GA + A + +
Sbjct: 231 LVILLVWMYYASVVFFVGALITAVIDERVRSHRK 264
>gi|33866717|ref|NP_898276.1| serum resistance locus BrkB [Synechococcus sp. WH 8102]
gi|33633495|emb|CAE08700.1| similar to serum resistance locus BrkB [Synechococcus sp. WH 8102]
Length = 309
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/286 (15%), Positives = 109/286 (38%), Gaps = 22/286 (7%)
Query: 1 MREYFCIVFDI--IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANL-AGFLGAHQ 57
MR I + + ++ A + +V + +++ + L S+FP ++ ++ A +G
Sbjct: 1 MRRRARIRWIVVSLWRAGQRWVSHECVDLSAAFAYFTLQSIFPLLLIALSVFANVIGKAD 60
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + + P + + ++ G + +SN L+ +
Sbjct: 61 SLDYLFSSLSPVLPPSALDLVETTLRGLVD-QGFGAGLFGVVVLLVTASNAFLTLQRGAD 119
Query: 118 RAYRVVEMRS------------WYITRLISFGYVLLASVTLVIMSFVFVAIPL---ALAY 162
R + + +RL +F VLL + L++ V L LA
Sbjct: 120 RLWEEWMPSPTQSQSFSFQAIQFIRSRLEAFMIVLLLASLLLVEQVVVGFRQLPDELLAT 179
Query: 163 VRKFFPALGNLLLI---IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
+++F P L +L G+I L L + + + LP+ + + ++PG +
Sbjct: 180 LQQFAPELSLVLRTGPVTRLGQILVPTLFLSLLALLLQRVLPSRRVPLRPLIPGSLLIGF 239
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
S + + + I++ Y + ++ ++++++G+ G
Sbjct: 240 SLTILNSVLSLSIISLGNRYQAYGVIGGVLVLTLWVWLVGLILYFG 285
>gi|254301308|ref|ZP_04968752.1| putative ribonuclease BN [Burkholderia pseudomallei 406e]
gi|157811106|gb|EDO88276.1| putative ribonuclease BN [Burkholderia pseudomallei 406e]
Length = 304
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 138
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 139 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 194
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 195 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 253
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 254 GSFAVLLMWLYFSAAVLLL 272
>gi|241758992|ref|ZP_04757104.1| tRNA-processing ribonuclease BN [Neisseria flavescens SK114]
gi|241320813|gb|EER57046.1| tRNA-processing ribonuclease BN [Neisseria flavescens SK114]
Length = 400
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/239 (16%), Positives = 80/239 (33%), Gaps = 16/239 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ + F EE +A+ ++ + LL++ P + +A Q+ + +
Sbjct: 18 FVWFVVRRFDEERVPQVAASMTFTTLLALVPVLTVMVVIASAFPVFDQWSGAFVSFINRT 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + D I A L I ++ S + + + NR +RV R W
Sbjct: 78 IVPQGADMVFDYI-NAFRDKATNLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNSQRPWM 136
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ ++ + PL+L ++ R T+ +
Sbjct: 137 MQ--------------FLVYWALLTFGPLSLGVGLSVVIGQVQVVSGSEWLRGITTVSFI 182
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ L ++ F+P L G T LF Y+ F Y ++Y A++
Sbjct: 183 TLLLWGLYRFVPNRFVPASHALVGAAVTAFCLETARFLFAWYMGNFDGYKSIYGAFAAV 241
>gi|110833134|ref|YP_691993.1| ribonuclease BN family protein [Alcanivorax borkumensis SK2]
gi|110646245|emb|CAL15721.1| ribonuclease BN family protein [Alcanivorax borkumensis SK2]
Length = 309
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 106/276 (38%), Gaps = 12/276 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
M++ F F I+ ++ ++E + + A ++ L S+ P I+ + + + +
Sbjct: 7 MKDSFLYWFSILKRSVTLWLEGNAVSYAGSLAFFTLFSLAPVIILAVKVISLVMTSDAAM 66
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + A + + I +S L ++ ++ S+N
Sbjct: 67 AEILGQLEATIGPEAANEVRNAIANTQTPRQGLLAGLLSLLVMVIGATTVFAQMQRSMNA 126
Query: 119 AYRVVEMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+ V+ S +RL+S V+ L++ + V + + Y + P +
Sbjct: 127 IWEVMPRPSRNTIAALIKSRLLSLTVVVSLGFVLLVSLLLNVVVQAIIVYAEGWLPIHSS 186
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+++I + LF + LP +++P + T I + VG L Y+
Sbjct: 187 VVVIFEMTVSLVVIGLLFGTM---FRVLPDVVLNWKAVMPAALITAILFSVGRALIGLYL 243
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+T ++ Y S++ L+++Y + + GA
Sbjct: 244 AHTAT-ASTYGAAGSLVVLLMWVYFSSMILLFGAAF 278
>gi|261381267|ref|ZP_05985840.1| YihY family protein [Neisseria subflava NJ9703]
gi|284795742|gb|EFC51089.1| YihY family protein [Neisseria subflava NJ9703]
Length = 400
Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 80/237 (33%), Gaps = 16/237 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWP 71
+ + F +E +A++++ + LL++ P + +A Q+ + +
Sbjct: 20 WFVVRRFDDERVPQVAANMTFTTLLALVPVLTVMVVIASAFPVFDQWSGEFVSFINRTIV 79
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + D I A L I ++ S + + + NR +RV R W +
Sbjct: 80 PQGADMVFDYI-NAFRDKATKLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNSQRPWMMQ 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + PL+L ++ RI + + +
Sbjct: 139 --------------FLVYWALLTFGPLSLGVGLSVVIGQVQVVGGSEWLRIITAVSFITM 184
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L ++ F+P L G T LF Y+ F Y ++Y A++
Sbjct: 185 LLWGLYRFVPNRFVPASHALVGAAVTAFCLETARFLFAWYMGNFDGYKSIYGAFAAV 241
>gi|260577482|ref|ZP_05845425.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
gi|258604381|gb|EEW17615.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
Length = 381
Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 80/257 (31%), Gaps = 18/257 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
I + +S LL+ P ++ + +Q + +
Sbjct: 52 IAKRLYFEVFFNALLDKGATLSFFTLLTGLPTLLAFYAIITLFLDQNRNQVTELTDEFID 111
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + V+ + + IS L A + SS + A N Y E
Sbjct: 112 KNIPTNFQDNAQSIVSTVIGSTEQSIVMLVISVLLALFSSSAYLRAFSRMSNEMYGRREG 171
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVF-----VAIPLALAY-----VRKFFPALGNLLL 175
R + L+ + LV ++ + +A PL ++ F + L
Sbjct: 172 RGLIRRWTTMWAVTLVLVIGLVFIAGAYFLREDIARPLLDKVAEPLRIQGFTTFVLEHFL 231
Query: 176 IIWN-GRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
+W R I + ++ P + ++ + G F IS + +L Y+
Sbjct: 232 PVWQYLRWPVIFFVSAILIAILYHVAPNVRFGRVRWLTVGSTFALISITIVGLLLRAYLN 291
Query: 234 TFSTYSTMYAGLASIMT 250
F Y +Y L I+
Sbjct: 292 NFG-YIGIYGALGGIIV 307
>gi|240122814|ref|ZP_04735770.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae PID332]
gi|268681428|ref|ZP_06148290.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID332]
gi|268621712|gb|EEZ54112.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID332]
Length = 408
Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 11/243 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + I F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + N +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-DAFRDQANRLTAIGSVMLVVTSLMLIRTIDNAFNHIWRVNTQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + L+ + + + ++ L + + A
Sbjct: 134 PWMMQFLVYW--------ALLTSGPLSLGVGISFMVGSVQDSVLSSGAQQWADALKTAAR 185
Query: 187 LALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
LA L++ ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASI 248
A++
Sbjct: 246 AAV 248
>gi|254786956|ref|YP_003074385.1| tRNA-processing ribonuclease BN [Teredinibacter turnerae T7901]
gi|288559233|sp|C5BNZ4|Y3006_TERTT RecName: Full=UPF0761 membrane protein TERTU_3006
gi|237684892|gb|ACR12156.1| tRNA-processing ribonuclease BN [Teredinibacter turnerae T7901]
Length = 428
Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 103/280 (36%), Gaps = 8/280 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++ + F E A+ ++ L ++ P + + + A V
Sbjct: 13 KRIRGVLLQFSKELFFEFNERGCQRSAAALTYMTLFALVPLMTVTYTMFSAIPAFDGVGD 72
Query: 62 VID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ ++F + + ++ + + A+ L + + + + + + N +
Sbjct: 73 QLNGLIFHHFLPETGEEVSQYLSD-FSSQARRLSGVGVVMLLVTAYLMLRNIETTFNSIW 131
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS L+ + +L LV +F+ L++ + + LG + L+
Sbjct: 132 GVKQARSGLSGYLL-YWAILSVGPILVAAAFLLSTYLLSVQIMLEDLDGLGVMQLVYRVV 190
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
T + + +P + G + T ++ V +F YIV S++
Sbjct: 191 PWALT----SAAFTLLFVAVPNCRVPFKFGAIGGVITAFAFEVVKAVFG-YIVANSSFKL 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A + L+++ +L + GA ++ + + +
Sbjct: 246 IYGAFAVVPLFLLWVNLLWTIILGGAVFVRTLAEHSYASR 285
>gi|300712103|ref|YP_003737917.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299125786|gb|ADJ16125.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 271
Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 98/253 (38%), Gaps = 15/253 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
E+ A+ + A S+ P ++ + + + I+ V G I I +
Sbjct: 19 EQHVTVTAAGLGYYAFNSLVPLLLLVTIAISIVYDPETTASAIESVSGLRATEIEPVIAE 78
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
A GL A Y + +A+ ++ + Y + RS
Sbjct: 79 VTGNGGARTRAGLIAAGIFA--YSTVTMFQAVNMAFSEIYGTRKRRSGLRK--------- 127
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ TL+I + V +A+ L A + ++ + + + + + A F+ + ++
Sbjct: 128 -GTDTLLIFATVLIAVSLIGAVGVALVLRVDSVAVSVLS--VPLLLGAFFLAFLPMYYRF 184
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P + +PG F+ ++W + A+ F Y T + +Y +++ L +LY+ G+
Sbjct: 185 PGQSVTLGEAMPGAAFSAVAWTLSALFFRVYAATADS-VALYGIAGAVLLVLTWLYLGGL 243
Query: 261 FFILGAELNASMI 273
+ GA NA +
Sbjct: 244 ILLFGAIFNAVLA 256
>gi|309812533|ref|ZP_07706281.1| YihY family protein [Dermacoccus sp. Ellin185]
gi|308433511|gb|EFP57395.1| YihY family protein [Dermacoccus sp. Ellin185]
Length = 368
Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 97/266 (36%), Gaps = 25/266 (9%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
I FV++ G +A+ I+ LS+FP ++ ++ GF+ G + ++D V P
Sbjct: 23 VIYKFVDDQGAYLAALITYYGFLSIFPLLLLLQSVLGFVIDGDDRLRQQILDSVLAQIPV 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE--MRSWYI 130
+ + I + + I A+ A Y +A++ + N + V + +
Sbjct: 83 LGPSLHSASIESL--TGSVSAIVIGAIVALYGGLGVAQAIQHTSNHCWAVPRNSRPNPIL 140
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R+ S ++ L+ + L L + + ++
Sbjct: 141 MRVRSGAIIMFLGAALIAIGI------------------LPTLWKPLQSWAWLLNVVFGT 182
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST-MYAGLASIM 249
+ + A + PG F +W T + F ST Y I+
Sbjct: 183 GIFLLLMKMTNARGEGWGRLAPGAFFISFAWQFFVANSTTFTNIFGARSTGTYGTYGGIL 242
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
T L+ Y++ + F++G E+N + +
Sbjct: 243 TLLLASYLMSLSFVIGTEINVVLHKH 268
>gi|300714623|ref|YP_003739426.1| tRNA-processing ribonuclease BN [Erwinia billingiae Eb661]
gi|299060459|emb|CAX57566.1| tRNA-processing ribonuclease BN [Erwinia billingiae Eb661]
Length = 290
Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 103/276 (37%), Gaps = 8/276 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + E E+ +A +++ +LLS+ P + L + V
Sbjct: 8 RHRLRAFWGWLKLLWERIDEDAMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPSFANVSV 67
Query: 62 VID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I + Q +A K + + A + + ++ +LN +
Sbjct: 68 QLKAFIFNNFVPSSGTVIQSYLEQFVANVNK-MTAVGACGLVVTALLLMYSIDTALNTIW 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + +L L S + L+L + + + +I G
Sbjct: 127 RSKRKRPIVYSFAV-YWMILTLGPLLAGASLAISSYLLSLRWAS-----VTGVSWLIDYG 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L ++ ++ +P + L G + + + +G F Y+ F +Y
Sbjct: 181 LRIFPLLLSWLSFWLLYSIVPTRQVAGKDALIGALVAGLLFELGKKGFALYVTMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y LA I +++Y +LGAE++A++ Y
Sbjct: 241 IYGVLAVIPILFLWVYWTWCIVLLGAEISATLGDYR 276
>gi|89901762|ref|YP_524233.1| ribonuclease BN [Rhodoferax ferrireducens T118]
gi|122478675|sp|Q21U51|Y2991_RHOFD RecName: Full=UPF0761 membrane protein Rfer_2991
gi|89346499|gb|ABD70702.1| tRNA-processing RNAse BN [Rhodoferax ferrireducens T118]
Length = 416
Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/258 (18%), Positives = 96/258 (37%), Gaps = 9/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VVFGAWPEVI 74
E + E+ AS ++ + +++ P + + + +V+ +V P+ I
Sbjct: 40 ERYSEDRLGLTASSLTFTTTMALVPLVTVALAIFTAFPMFAKLQSVLQKWLVTSLIPDNI 99
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q A A L + + + +LN +RV RS L+
Sbjct: 100 ARQVLGYLTQ-FAGQASKLGGAGIALLLVTAVALILTIDHTLNGIWRVRTRRSLGQRVLV 158
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + + A V P LL + + G+
Sbjct: 159 YWAALTLGPLVLGVSLSITSYAISASKGVVGVMPGGVQFLLDVLQ------FFMVAWGMA 212
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F+P K G +F + L Y+ TYS +Y A++ L++
Sbjct: 213 AMYHFVPNTWVKWSHAWAGGMFVSAGLELAKKLLALYLGKVPTYSVLYGAFATVPILLIW 272
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ + +LGA + A +
Sbjct: 273 IYVAWIIVLLGAVIAAYL 290
>gi|257464081|ref|ZP_05628465.1| ribonuclease BN [Fusobacterium sp. D12]
gi|317061601|ref|ZP_07926086.1| ribonuclease BN [Fusobacterium sp. D12]
gi|313687277|gb|EFS24112.1| ribonuclease BN [Fusobacterium sp. D12]
Length = 394
Score = 93.7 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 95/267 (35%), Gaps = 21/267 (7%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
E + V I A+ + E + + + +LS+ P ++ +LG +++
Sbjct: 8 EIYSGVGTSIKHALWKYKEANSNLWVTSLCYYTILSMIPIFAILFSIGTWLGLGEYLLKQ 67
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYR 121
ID + + +L G+ + L + + + + N +
Sbjct: 68 IDS-HSPLKGEAIELLLTFTDNLLTNARSGVLAGLGFLFLIWSLISMFSIVEKAFNDIWD 126
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ RS+ R IS + +I+ ++ + ++ K P
Sbjct: 127 IEGTRSFV--RKISDYLTFFILLPTLILVSNASSLLIRNDFLSKILPY------------ 172
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + + + + +P + K + FT I + V F + V +TY+ +
Sbjct: 173 -----CSVLLFFMALFMVMPNTEVKWLPAFIASFFTSIMFSVFQYAFIYLQVLINTYNKI 227
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y + + L++L + ILGA L
Sbjct: 228 YGSFSVLFIFLIWLRIAWFLIILGAHL 254
>gi|300727197|ref|ZP_07060614.1| YihY family protein [Prevotella bryantii B14]
gi|299775545|gb|EFI72138.1| YihY family protein [Prevotella bryantii B14]
Length = 441
Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/244 (17%), Positives = 92/244 (37%), Gaps = 3/244 (1%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQ 84
A+ +S S +L++ P + + G +V ++ VF + P+V + T
Sbjct: 48 MDYATQLSFSTILALVPILAMFFAVGRAFGLSMYVDNILRQVFKSQPQVADELFTMADSY 107
Query: 85 VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV 144
+ L + L Y + + + + + + V RS + + L V
Sbjct: 108 LNQAQTGILIGLGILVMLYSILSLIRNIEMVFDIIWHVDRQRSVGRLIIDYTAMIFLIPV 167
Query: 145 TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK 204
L+I+S V + L + F G + + R+ + L L I V++++P
Sbjct: 168 ILIILSSTSVLVFGVLDRIPDFLLLDG---IFRFLIRVVSPWLLLTAVFIGVNMYVPNTH 224
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
K+ + +F + + H + ++Y+ +Y A I ++++ +
Sbjct: 225 VKLSCTIIPSMFASAFMLALQYFYIHGQIFLTSYNAIYGSFAVIPLFMIWMLASWYIILF 284
Query: 265 GAEL 268
EL
Sbjct: 285 FGEL 288
>gi|262273176|ref|ZP_06050992.1| ribonuclease BN [Grimontia hollisae CIP 101886]
gi|262222754|gb|EEY74063.1| ribonuclease BN [Grimontia hollisae CIP 101886]
Length = 256
Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 86/243 (35%), Gaps = 8/243 (3%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIAKPITDEILQVLAVP 89
++ LLS+ P I + + I V + + + + +A
Sbjct: 1 MAYVTLLSLVPLITVLLSALSLIPGFAEAGDQIRIFVLHNFVPASGDALEQYLNEFVAN- 59
Query: 90 AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
A + + + + A+ SLN +RV + R+ ++ I + + L V +
Sbjct: 60 AGKMTAVGVAFLFVVALMLISAIDKSLNYIWRVKKKRATVVSFSIYWMVLTLGPVLVGSS 119
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS 209
V + + L LL L + + ++ +P + KI
Sbjct: 120 LGVSSYLGSLNLMAVEGADMLSPTLLKR------LPFLLTALAFLGLYTLVPNCRVKIGH 173
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
G I + + F Y F +Y +Y LA + V++Y+ ++GAE+
Sbjct: 174 AFSGAITAALLFEFSKKGFAFYASNFPSYELIYGALAVVPLLFVWVYLSWCIVLVGAEIT 233
Query: 270 ASM 272
A++
Sbjct: 234 AAL 236
>gi|240169691|ref|ZP_04748350.1| hypothetical protein MkanA1_10287 [Mycobacterium kansasii ATCC
12478]
Length = 314
Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 108/277 (38%), Gaps = 15/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ I + ++ ++ ++ + LS+ P ++ ++ F +
Sbjct: 15 HHIWRISLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVA-PLFGQDTLPA 73
Query: 66 VFGAW---------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ P V+ + I I + A + ++ L + + S+ + + ++
Sbjct: 74 IEKTIISTAHSFFSPSVVNEIIEPTIRDITANARGEVVSLGFLISLWAGSSAISSYVDAV 133
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
A+ +R R + ++ V +V + V V P V + PA +L I
Sbjct: 134 VEAHDQTPLRHPVRQRFFALFLYVVMLVFVVATAPVAVVGP---RKVSERIPA--SLANI 188
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ G A ++ L +G+I ++ ++ G + +++ + Y+ +
Sbjct: 189 LHYGYYPALIVGLTLGVIILYRVALPVPLPTHRLVIGAVLATAVFLIATLGLRFYLTWIT 248
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ Y L++ + L+F + G ++GAELNA++
Sbjct: 249 STGYTYGALSTPIAFLLFAFFGGFAIMIGAELNAAIQ 285
>gi|261378243|ref|ZP_05982816.1| YihY family protein [Neisseria cinerea ATCC 14685]
gi|269145322|gb|EEZ71740.1| YihY family protein [Neisseria cinerea ATCC 14685]
Length = 408
Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 83/243 (34%), Gaps = 11/243 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + + F EE A+ ++ + LL++ P + +A ++ + + V
Sbjct: 15 ICAFAWFVVRRFSEERVLQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFV 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + D I A L I ++ S + + + N +RV R
Sbjct: 75 NQTIVPQGADMVFDYI-DAFRDQANRLTAIGSVMLVVTSLMLIRTIDNAFNHIWRVNTQR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W + L+ + + ++L + V L + + A
Sbjct: 134 PWMMQFLVYWALLTFGPLSLGVGISFMV--------GSVQDSVLSSGAQQWTDALKTAAR 185
Query: 187 LALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
LA L++ ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASI 248
A++
Sbjct: 246 AAV 248
>gi|302338786|ref|YP_003803992.1| ribonuclease BN [Spirochaeta smaragdinae DSM 11293]
gi|301635971|gb|ADK81398.1| ribonuclease BN [Spirochaeta smaragdinae DSM 11293]
Length = 408
Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/264 (16%), Positives = 91/264 (34%), Gaps = 11/264 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID- 64
++ I I F+++ AS ++ S LL++ P ++ GA I
Sbjct: 4 KSIYRTIRTVIREFLKDSCTLRASGLAFSTLLALVPLSATVFGISTAFGAFSSTEAQIKN 63
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ P + ++ +V A L + + A S + + + ++ N +
Sbjct: 64 FLINQLLPTRQQEILSTI--EVFVENANTLGIVGFMVFAVTSVSLLNGINVNFNAVWGSP 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ L Y + + + F A ++ + L ++ G
Sbjct: 122 IKKGIL---LFFTNYTSIIVFGTIFLGASFTLTNTATQIIK----GVPELFWLLKIGLRI 174
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A L F+ + + +P + S L G + I W V F S +Y
Sbjct: 175 APYLFTFLLFLIMIYVIPTGVVRKKSALVGALIGSILWEVAKYGFVKGTNYILRASIIYG 234
Query: 244 GLASIMTCLVFLYMLGVFFILGAE 267
+A+I L +LY++ + E
Sbjct: 235 SIATIPIFLFWLYLIWMIIFFSLE 258
>gi|294785289|ref|ZP_06750577.1| ribonuclease BN [Fusobacterium sp. 3_1_27]
gi|294487003|gb|EFG34365.1| ribonuclease BN [Fusobacterium sp. 3_1_27]
Length = 416
Score = 93.4 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 103/268 (38%), Gaps = 12/268 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + ++ A E + + + +S +L++ P + +L+ + GA ++
Sbjct: 12 KFNTKNLKLMLKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIIN 71
Query: 62 VIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + + +TD +L + L + L + + S N +
Sbjct: 72 QIKDIAP-LKGGTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIW 130
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + RS + + +T +I++ + + + + ++ + +
Sbjct: 131 HIKKSRSLIRKISDYISFFIFLPLTFIILNGLILFL----------LSKIKEIVFLYYII 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++++ I + V+L +P KI+ + I++++ +F Y+T
Sbjct: 181 KNILPLISMTIFFMAVYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y G + I L+++ + ILGA +
Sbjct: 241 VYGGFSVIFIFLIWVRICWFIIILGAHI 268
>gi|302382887|ref|YP_003818710.1| ribonuclease BN [Brevundimonas subvibrioides ATCC 15264]
gi|302193515|gb|ADL01087.1| ribonuclease BN [Brevundimonas subvibrioides ATCC 15264]
Length = 308
Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 85/271 (31%), Gaps = 11/271 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
A D +S ALL+VFP I + + V + P
Sbjct: 20 RAFTRSWGRDVMLYTGGVSFFALLAVFPAIAILIGFYKAVLSIAQVGEQAAALADVMPHA 79
Query: 74 IAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
EI ++ A+ + T + + AY + G +AL LN + E ++
Sbjct: 80 ARAIFRAEIERLSNASARTVSTQSAFALIVGAYAAHRGFKALLAGLNLIHDETEPHGFFK 139
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L++F L A ++S V L L L
Sbjct: 140 FNLLAFFVALFAFALFTVVSGAVVTSRLL------DHAGPAAASSGFMPLDGLWPALGLG 193
Query: 191 IGLIFVHLFLPAAKSK--IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+GL ++ + + + + G + + +V + L Y+ + Y + ++
Sbjct: 194 LGLTLLYRYAMSHRDPVAWGPSITGGVVATLMSMVSSWLCAIYVEQIAQLGATYGSVGAV 253
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L++L G M I +
Sbjct: 254 VVLLIWLSWNVNAIFYGGAFATEMEIASRAR 284
>gi|73539157|ref|YP_299524.1| ribonuclease BN [Ralstonia eutropha JMP134]
gi|72122494|gb|AAZ64680.1| Ribonuclease BN [Ralstonia eutropha JMP134]
Length = 329
Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 98/253 (38%), Gaps = 7/253 (2%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ + +S L S+ P +V ++AG F GA + + + E A I
Sbjct: 50 HRAASKGAALSFYMLFSLAPILVLVISIAGLFFGAEAARGEIFEQLQDLVGEQGASAIQS 109
Query: 81 EILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEMRSW-YITRLISFGY 138
+ G+ I A + +++ L+ SL+ + V + + L S
Sbjct: 110 ILAATHRAGGSGVAAIIATGILFVGATSAFAELKSSLDDIWHVPVPATAGWQQLLRSRLL 169
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG---LIF 195
+ L +M V + + ALA + +F+ AL + +T+ + +
Sbjct: 170 SFSLVLVLALMLLVSLIVNAALAVIDRFWGALWTQSWFAPVADVLSTLFSFAVVTALFAV 229
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ LP A+ + G I T + + VG L Y+ S ++ Y S++ ++++
Sbjct: 230 IFKMLPNARIAWRDVTMGAIITAVLFSVGKRLIGLYLGN-SAVASSYGAAGSVVALMLWV 288
Query: 256 YMLGVFFILGAEL 268
Y F GAEL
Sbjct: 289 YYSAQIFFFGAEL 301
>gi|300310773|ref|YP_003774865.1| exoribonuclease BN transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300073558|gb|ADJ62957.1| exoribonuclease BN transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 317
Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 109/269 (40%), Gaps = 14/269 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
+ + AI ++++ +M + I+ + S+ P +V +AG G +++ +
Sbjct: 12 WQMTMAAINAWIDDFAPSMGAAIAYYTIFSIAPMLVIAIAVAGMLFGHDAAQGEIVNQIR 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYR---V 122
A I + V + P +G+ IS + ++ L+ +L+R +R V
Sbjct: 72 DIVGTEGAFAIQGLLKSV-SQPREGMIAAGISVVTLVIGATAVFSELQSALDRIWRIPAV 130
Query: 123 VEMRSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ TRL+SFG +L L+I V A+ + +F +L ++
Sbjct: 131 KRKSGVWQLARTRLLSFGLILGLGFLLIISLVVSAALAALGRWWGGWFEGWQLVLQLLN- 189
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + ++ F+P + G + T + +++G L Y+ + + +
Sbjct: 190 --FVLSFVVFSTLFSMIYKFMPRVTLSWRDVWIGAVATTVLFIIGKYLIGLYLGS-TGMT 246
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ + S L+++Y F+LGAE
Sbjct: 247 SGFGAAGSFALLLLWIYYSAQIFLLGAEF 275
>gi|238759865|ref|ZP_04621021.1| tRNA-processing ribonuclease BN [Yersinia aldovae ATCC 35236]
gi|238701926|gb|EEP94487.1| tRNA-processing ribonuclease BN [Yersinia aldovae ATCC 35236]
Length = 273
Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 99/266 (37%), Gaps = 8/266 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P + L + + +F +
Sbjct: 2 LYTRIDKDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPMFADISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKTQRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ Y ++ ++ +++ V L+ +G+++ + +L ++
Sbjct: 121 V---YWMVLTLGPILVGASMVISSYLLSLHWLANAQVGSMIDEV---LRVFPLLISWLSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDAFIGALVAALLFELGKKAFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRK 279
++Y +LGAE+ ++ Y +
Sbjct: 235 WVYWSWCIVLLGAEITVTLSEYRTER 260
>gi|149278657|ref|ZP_01884793.1| hypothetical protein PBAL39_23547 [Pedobacter sp. BAL39]
gi|149230652|gb|EDM36035.1| hypothetical protein PBAL39_23547 [Pedobacter sp. BAL39]
Length = 348
Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 51/292 (17%), Positives = 103/292 (35%), Gaps = 19/292 (6%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+F + + A + F+E+ +++ ++ + S+ P IV + A +
Sbjct: 10 FFKATYHLFIAAGKGFMEDRVMKLSAALAYYTIFSLAPLIVIVISAASIFLGDRLAINPN 69
Query: 64 DVVFG-------AWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRIS 115
D +FG A + + + + I ++ ++ S
Sbjct: 70 DELFGPSGEITQMIGGEAAAQLRSFVSNANYSGKSTLGLIIGITTLIIGATAIFIEIQDS 129
Query: 116 LNRAYRVVE--MRSW---YITRLISFGYV----LLASVTLVIMSFVFVAIPLALAYVRKF 166
+N ++V + W RL+SF + L V+LVI S V Y +
Sbjct: 130 INLIWKVKAVPKKGWKKLITNRLLSFSLIASLGFLLLVSLVINSIVVGIGNKLTGYAAQV 189
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+ LL++ T+ + + LP K + G +FT + + VG
Sbjct: 190 GIEEVSQLLVVILTN-ALTLTVVAAIFTIIFKVLPDVNLKWKPAIVGALFTAVLFSVGKY 248
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YI + + +SI+ L+++Y + GAE + Y +
Sbjct: 249 AIGIYIEK-GNPGSAFGAASSIIVILLWIYYTSIILYFGAEFTQAYAEKYGK 299
>gi|73670039|ref|YP_306054.1| ribonuclease RN [Methanosarcina barkeri str. Fusaro]
gi|72397201|gb|AAZ71474.1| ribonuclease RN [Methanosarcina barkeri str. Fusaro]
Length = 276
Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 112/271 (41%), Gaps = 11/271 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVI 63
V +++ I+ ++E++ ++ ++ +LS+ ++F ++ FL + +I
Sbjct: 3 LGYVRNLVTRTIKEWMEDNAMTYSAALAYYFVLSLPALLLFSVSIGSIFLKSENLQSKII 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + GA E I I ++ + + + I + + +SN L+ L RA+ +
Sbjct: 63 NNLQGAVDERIINMIILLFERIPEINSLSISALIGFIFLLWSASNVFRQLKNFLERAWDI 122
Query: 123 V-----EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
++ + ++SF V+L L + F+ + A ++F P +
Sbjct: 123 KPVESNNIKDFIRDAIMSFFIVILFGGLLAMSIFIEGFVYAASNLFQQFLPFSPLIADYT 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + L L + I V+ LP + SI G T + +G + +I +S
Sbjct: 183 GSI---VSFLILVLFFILVYRVLPDRSFDLKSIFVGAFVTAVLVTIGKYVIVLFIA-YSN 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +Y + SI+ + Y + LGAE
Sbjct: 239 PTDVYGAIGSIIGLFLLFYYSSIMITLGAEF 269
>gi|254428557|ref|ZP_05042264.1| YihY family protein [Alcanivorax sp. DG881]
gi|196194726|gb|EDX89685.1| YihY family protein [Alcanivorax sp. DG881]
Length = 303
Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/277 (16%), Positives = 111/277 (40%), Gaps = 14/277 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
M+ F I + + ++E + + A ++ L S+ P I+ + + + +
Sbjct: 1 MKAIALYWFGIFKNTVRLWLEGNAVSYAGSLAFFTLFSLAPVIILAVKVISLVMTSDAAM 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLN 117
++ + A + + I P++GL +S L ++ ++ S+N
Sbjct: 61 TEILGQLEATIGPEAANEVRNAIAN-TQAPSQGLLAGMLSLLVMIIGATTVFAQMQRSMN 119
Query: 118 RAYRVVEMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ V+ S +RL+S V+ L++ + V + + Y + P G
Sbjct: 120 AIWEVMPRPSRNTIAALIKSRLLSLTVVISLGFVLLVSLLLNVVVQAIIVYAESWLPIHG 179
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+++++ ++L + + + LP +++P + T I + VG L Y
Sbjct: 180 AVVVVVEMS---VSLLVIGLLFGTMFRVLPDVVLNWKAVMPAALVTAILFSVGRALIGLY 236
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +T ++ Y S++ L+++Y + + GA
Sbjct: 237 LAHTAT-ASTYGAAGSLVVLLMWVYYSSMILLFGAAF 272
>gi|192360706|ref|YP_001982745.1| putative ribonuclease [Cellvibrio japonicus Ueda107]
gi|288559229|sp|B3PJS2|Y2282_CELJU RecName: Full=UPF0761 membrane protein CJA_2282
gi|190686871|gb|ACE84549.1| probable ribonuclease [Cellvibrio japonicus Ueda107]
Length = 427
Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 98/270 (36%), Gaps = 8/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVV 66
+ +Y ++ + + A+ ++ L + P + + + A Q + + +++
Sbjct: 21 LKGFLYLIVQQYQAKACQKSAASLTYMTLFATVPMMTVTYAMFSIIPAFQHLGDQLQNLI 80
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + I+ + + A+ L + + + ++ + + N + V + R
Sbjct: 81 FTHVLPNNEQDISRYLKN-FSAQARQLTWLGGVFLVVSAYLMLKNIEKNFNAIWGVAQGR 139
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
R I+ + A ++L + + + L ++ Y
Sbjct: 140 -----RGIANFLLYWAILSLGPLLLGVALAMSTYLTSFRLLVGSYDSLGVLELVFQYVPW 194
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + + + +P K L G + T I++ +F + S+++ +Y A
Sbjct: 195 LLNWAAFTLLFVAVPNCKVPTRHALVGGLLTTIAFQALKAIFAWIVSH-SSFTLVYGAFA 253
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ L+++ M + + GA S+ Y
Sbjct: 254 ALPLFLLWVNMTWMVILGGAVFVHSIKFYQ 283
>gi|253997416|ref|YP_003049480.1| cyclic nucleotide-binding protein [Methylotenera mobilis JLW8]
gi|253984095|gb|ACT48953.1| cyclic nucleotide-binding protein [Methylotenera mobilis JLW8]
Length = 446
Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 106/274 (38%), Gaps = 7/274 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
+ + + ++ + F + +++ +S A+ ++ P ++ L + + +
Sbjct: 42 NQRYNTPLFVFHEMFKAFQRHNALGLSASLSFYAMFALIPLVLLMFFLLSQLIFSSDYAI 101
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ ++ + I E+ A + + + A+R +
Sbjct: 102 VKLAIITSNLVPQFSNAIMTEVYS-TAKHQVAWGALGLFILLWTVTPLASAMRAAFYSIA 160
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+VE S+ ++ ++ + + +F + + + +V + N +
Sbjct: 161 SLVEAPSFVKRKIKDIFAIIGMLLLFFLFTFAGLMLEKVIIFVGASNHFIHNEVFTTLTS 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
T+L F +F PA + I I G +FT I W++ FT ++ +YS+
Sbjct: 221 LGLTTLLI----SAFYFVFFPA-RLYIKHIFIGALFTAILWLLMRPAFTLFLSMNESYSS 275
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++ + ++ + +LY+ F+LG EL A++
Sbjct: 276 IFGSMKNLFISITWLYVNFAVFLLGTELIATLRK 309
>gi|46446532|ref|YP_007897.1| putative RNase BN, tRNA processing enzyme [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400173|emb|CAF23622.1| putative RNase BN, tRNA processing enzyme [Candidatus
Protochlamydia amoebophila UWE25]
Length = 389
Score = 92.6 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 92/238 (38%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
++ LLSV P + +A G + + + ++ F E++ K I + V
Sbjct: 1 MTFYTLLSVVPVLAVLFGIAKGFGFEKALESELNQQFLEQKELVEKVIEFAYTWLKTVQG 60
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
+ I L + + + ++LN ++ R + +L+A + LV S
Sbjct: 61 GVIAGIGTLTLLWTVFGLLNNIEMALNAIWKTRHTRPYSRKISDYLAAMLVAPLFLVTSS 120
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
+ V I + + L ++ ++ FV+LF+P K + S
Sbjct: 121 SINVFINTQITQTAHNNIIVEALSPFLFYLLKLFPYFLGWLLFTFVYLFMPNTKVYLRSA 180
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
L I ++ + ++ + + ++Y +Y A++ L++L + GAE+
Sbjct: 181 LIAGIVAGTAFQIWQWIYIKFQIGVASYGAIYGSFAALPLFLIWLQFSWNILLAGAEM 238
>gi|288928180|ref|ZP_06422027.1| YihY family protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288331014|gb|EFC69598.1| YihY family protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 440
Score = 92.6 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/263 (17%), Positives = 105/263 (39%), Gaps = 6/263 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+V + ++ F +AS ++ S +L++ P + +A G +++
Sbjct: 33 MVLKRLVVTVKFFTTRSVTDLASALTYSTVLAIVPIVAVVFAIARGFGFSKYIEVWFRDA 92
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ P+ I ++ I + + + + + N ++V R
Sbjct: 93 LSSQPQAAETIIGFVNSYLVHTKGGVFLGIGLVFMLFTVLMLISNIEKAFNSIWQVQHPR 152
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S + T L + +V+ S V + + + ++ LG ++ ++ Y M
Sbjct: 153 SLFRTITDYLAMFFLVPIVIVVTSGVSIVMATFAQDINEYV-VLGPMMRLVITVMPYVLM 211
Query: 187 LALFIGLIFVHLFLPAAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+F+ L F+P K + LPG I + I+ + V + H + S+Y+ +Y
Sbjct: 212 SAVFVCLFI---FMPNTKVNFSAAFLPG-ILSGIAMQLLQVFYIHSQIFLSSYNAIYGSF 267
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
A++ ++++ + + GAEL
Sbjct: 268 AALPLFMLWVQISWSICLFGAEL 290
>gi|74316985|ref|YP_314725.1| ribonuclease BN [Thiobacillus denitrificans ATCC 25259]
gi|74056480|gb|AAZ96920.1| ribonuclease BN [Thiobacillus denitrificans ATCC 25259]
Length = 300
Score = 92.6 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 107/271 (39%), Gaps = 12/271 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F + + ++ + +M + I+ + S+ P +V +AG + + I
Sbjct: 5 RSLFVLARKVVSAYIADYAPSMGAAIAYYSAFSLAPLLVIVIAVAGAVFGRDAIQGQIVA 64
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVV 123
G + + +++ + KGL +S A ++ L+ +L+R ++V
Sbjct: 65 QIGGLIGQEGAILVERLVRSASDTEKGLVAGLVSGGVLALGATTVFAELQRALDRIWKVP 124
Query: 124 EM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + RL+SFG +L + L++ V AI + + P +L +
Sbjct: 125 KSERPSGIWALLRARLLSFGLILGLAFLLMVSLIVSTAIAVFGRWTGALMPGWEVVLQCV 184
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
++ + + +P+A + G T + + +G +L Y+ S
Sbjct: 185 NMA---ISLSITTLLFAMIFKLMPSADVAWRDVWIGAAVTAVLFELGKLLIGLYLGK-SA 240
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S +A S++ L ++Y F+LGAE
Sbjct: 241 LSESFAAAGSLVVLLAWVYYASQIFLLGAEF 271
>gi|123440434|ref|YP_001004428.1| ribonuclease BN [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|166199589|sp|A1JHU3|Y031_YERE8 RecName: Full=UPF0761 membrane protein YE0031
gi|122087395|emb|CAL10176.1| ribonuclease BN [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 296
Score = 92.6 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEV 73
++ +A H++ +LLS+ P + L + + +F +
Sbjct: 23 LYTRIDKDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPMFADISIKLKAFIFTNFMPA 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 83 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKVHRSLVFSFA 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL LV S V + L+L ++ + +I +L ++
Sbjct: 142 V-YWMVLTLGPILVGASMVISSYLLSLQWLAN-----ARVDSMIDETLRLFPLLISWVSF 195
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G FT YI F +Y +Y LA I +
Sbjct: 196 WLLYSVVPTVRVPAQDALIGALVAALFFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 255
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 256 WVYWSWCIVLLGAEITVTLGEYRAQRH 282
>gi|257452626|ref|ZP_05617925.1| ribonuclease BN [Fusobacterium sp. 3_1_5R]
gi|257466482|ref|ZP_05630793.1| ribonuclease BN [Fusobacterium gonidiaformans ATCC 25563]
gi|315917639|ref|ZP_07913879.1| ribonuclease BN [Fusobacterium gonidiaformans ATCC 25563]
gi|317059165|ref|ZP_07923650.1| ribonuclease BN [Fusobacterium sp. 3_1_5R]
gi|313684841|gb|EFS21676.1| ribonuclease BN [Fusobacterium sp. 3_1_5R]
gi|313691514|gb|EFS28349.1| ribonuclease BN [Fusobacterium gonidiaformans ATCC 25563]
Length = 394
Score = 92.6 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 94/266 (35%), Gaps = 19/266 (7%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
E + V I A+ + E + + + +LS+ P ++ +LG +++
Sbjct: 8 EIYSGVGTSIKHALWKYKEANSNLWVTSLCYYTVLSMIPIFAILFSIGTWLGLGEYLLKQ 67
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
ID E I +T + + L + L + + + + N + +
Sbjct: 68 IDNHSPIKGEAIQLLLTFTDNLLTNARSGVLAGLGFLFLIWSLISMFSIVEKAFNDIWDI 127
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RS+ R IS + +I+ ++ + ++ K P
Sbjct: 128 DATRSFV--RKISDYLTFFILLPTLILVSNASSLLIQNDFLSKILPYFS----------- 174
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + + + +P + K + FT + + + F + V + Y+ +Y
Sbjct: 175 ------VLLFFMALFMVMPNTEVKWLPAFVASFFTSVMFSIFQYAFIYLQVLINAYNMIY 228
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
+ I L++L + ILGA L
Sbjct: 229 GSFSVIFIFLIWLRIAWFLIILGAHL 254
>gi|293605881|ref|ZP_06688251.1| serum resistance protein [Achromobacter piechaudii ATCC 43553]
gi|292815668|gb|EFF74779.1| serum resistance protein [Achromobacter piechaudii ATCC 43553]
Length = 293
Score = 92.2 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 113/271 (41%), Gaps = 11/271 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ ++ + +++++ +M + I+ + S+ P ++ +AGF H+ +
Sbjct: 3 IKRLYALVKQTVMNWLDDYAPSMGAAIAFYTVFSLAPLVIIVIGIAGFFWGHEAAQGQLF 62
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRV 122
A + ++ PA+G+ IS + S+ L+ +L+R ++V
Sbjct: 63 EQISALVGAEGGKAVESVVLGAQEPAQGIAATVISVVMLVIGSTTVFSELQSALDRIWKV 122
Query: 123 VEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + RL+SFG +L + L++ V + +++ P G LL +
Sbjct: 123 NAKKQSGIWALIRARLLSFGLILTLAFLLIVSLIVSTVLAALGSWLGGGDPGWGLLLQAV 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
T+ L + ++ F+P A + G T + + +G L Y+ S
Sbjct: 183 NEA---VTVGILTLLFGMIYRFMPQAPVAWRDVWAGAFVTAVLFEIGKFLIGLYMAKASI 239
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S+ A S++ L+++Y F+LGAE
Sbjct: 240 ASSY-AAAGSLVVVLIWVYFAAQVFLLGAEF 269
>gi|256845414|ref|ZP_05550872.1| ribonuclease BN [Fusobacterium sp. 3_1_36A2]
gi|256718973|gb|EEU32528.1| ribonuclease BN [Fusobacterium sp. 3_1_36A2]
Length = 416
Score = 92.2 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/268 (13%), Positives = 102/268 (38%), Gaps = 12/268 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + ++ A E + + + +S +L++ P + +L+ + GA ++
Sbjct: 12 KFNTKNLKLMLKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIIN 71
Query: 62 VIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + + +TD +L + L + L + + S N +
Sbjct: 72 QIKDIAP-LKGGTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIW 130
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + RS + + + +I++ + + + + ++ + +
Sbjct: 131 HIKKSRSLIRKISDYISFFIFLPLIFIILNGLILFL----------LSKIKEIVFLYYII 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++++ I + V+L +P KI+ + I++++ +F Y+T
Sbjct: 181 KNIFPLISMTIFFMAVYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y G + I L+++ + ILGA +
Sbjct: 241 VYGGFSVIFIFLIWVRICWFIVILGAHI 268
>gi|254176627|ref|ZP_04883285.1| putative ribonuclease BN [Burkholderia mallei ATCC 10399]
gi|160697669|gb|EDP87639.1| putative ribonuclease BN [Burkholderia mallei ATCC 10399]
Length = 295
Score = 92.2 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 10 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 69
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 70 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 129
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 130 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 186 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 244
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 245 GSFAVLLMWLYFSAAVLLL 263
>gi|119477005|ref|ZP_01617286.1| probable ribonuclease [marine gamma proteobacterium HTCC2143]
gi|119449812|gb|EAW31049.1| probable ribonuclease [marine gamma proteobacterium HTCC2143]
Length = 423
Score = 92.2 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 93/253 (36%), Gaps = 8/253 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIA 75
H++ + A+ ++ +L ++ P + + + A Q V I ++F +
Sbjct: 29 RHYLADGCSHSAAALTYMSLFALVPLLTVMYAILSAVPAFQEVGLQIQSIIFDNFVPSTG 88
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + + +V A+ L + + ++ + + N ++ + R R +S
Sbjct: 89 QEVETYLKD-FSVQARKLTGVGVGFLGITAILMLKNIEKTFNSIWKTRDNR-----RGLS 142
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ A ++L + K +++ I L
Sbjct: 143 SFLLYWAILSLGPLCIGLALGINTYLVSLKVIFDQVDVIGIGPYILRLTPYLLTSAAFTL 202
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
V +P + I G + T + + V LFT + ++Y +Y A++ L+++
Sbjct: 203 VFAAVPNCRVPIKHAFIGGLVTALVFEVAKQLFTSIVAN-TSYQNIYGTFAALPLFLLWI 261
Query: 256 YMLGVFFILGAEL 268
Y+ + + GAEL
Sbjct: 262 YLSWLIVLAGAEL 274
>gi|78213836|ref|YP_382615.1| serum resistance locus BrkB-like [Synechococcus sp. CC9605]
gi|78198295|gb|ABB36060.1| serum resistance locus BrkB-like [Synechococcus sp. CC9605]
Length = 310
Score = 92.2 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 48/287 (16%), Positives = 102/287 (35%), Gaps = 20/287 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAW 70
I+ A + + + +++ + L S FP ++ ++A G V V+ V
Sbjct: 14 IWQACQRWNNAECVDLSAAFAYFVLQSFFPLLLIALSVAARVFGKTDSVDNVLASVTQVL 73
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV-----VEM 125
P + + + ++ + +SN L+ +R +
Sbjct: 74 PPSVTSLVDSTLRGLVDQGFGAGVLGVVVLLL-TASNAYLTLQRGADRLWSEILPEPSAG 132
Query: 126 RSWY-------ITRLISFGYVLLASVTLVIMSFVFVAIPL---ALAYVRKFFPALGNLLL 175
SW+ TR+ +F V SV ++ V L L + F P L +
Sbjct: 133 LSWWQQVGQFCRTRVEAFLTVFAISVLIIFQQLVLSVGQLPEDILGVLNGFIPGLTGFVR 192
Query: 176 ---IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
I+ GRI L L + + + LP+ + + ++PG + + + I
Sbjct: 193 SSPILPLGRILVPALILSLMAWLLQVVLPSRRVPAIPLIPGALLIGFGLAFLNKILSLSI 252
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
V+ Y + ++ ++++++GV G L+ + K
Sbjct: 253 VSLGNRYQAYGVIGGVLVLTLWVWLVGVILYFGQCLSVELASVRLAK 299
>gi|325955112|ref|YP_004238772.1| ribonuclease BN [Weeksella virosa DSM 16922]
gi|323437730|gb|ADX68194.1| ribonuclease BN [Weeksella virosa DSM 16922]
Length = 301
Score = 92.2 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 45/283 (15%), Positives = 103/283 (36%), Gaps = 9/283 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ II I F ++ M++ ++ A+ S+ P ++ ++A L + +
Sbjct: 2 QKIKDLYKIIIQTIVEFTDDRLMKMSASLTYYAMFSLSPVLLIVLSMASLLYKKEAIENR 61
Query: 63 IDV-VFGAWPEVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +A I D + ++ + I + ++ ++ S N +
Sbjct: 62 LYYEIKELVGSELAIQIQDFVANSAVSGDSNIALIIGVGVLIFGATTVFTDMQDSFNLIW 121
Query: 121 RVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-L 174
R+ + + R +SF ++++ L V + + + +
Sbjct: 122 RIEAVPKRAMLKFLANRGVSFLFIMILGFILFSSVIVSSLVVRFGEDILHWLDISQTISA 181
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + I + FLP K K IL G + T + V ++Y+
Sbjct: 182 STFMMINNILSYVLAVIVFFLLFKFLPDIKVKPKPILIGSLVTAGLFFVAKYFISYYLS- 240
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S Y+T++ SI+ L+++Y GA+ YY
Sbjct: 241 ISKYNTIFGSAGSIVILLLYIYYNAAIMYFGAKFTKVFTEYYG 283
>gi|254302999|ref|ZP_04970357.1| ribonuclease BN [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148323191|gb|EDK88441.1| ribonuclease BN [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 416
Score = 92.2 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + ++ A E + + + +S +L++ P + +L+ + GA ++
Sbjct: 12 KFNTKNLKLMLKRAYEKYQSANSSFWVTSLSFYTILAIVPMLAILVSLSSWFGAEDYIIN 71
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
I + + +TD +L G+ + L + + S N +
Sbjct: 72 HIKDIAP-LKGETLELLTDFSNNLLMDARSGVLAGVGFLFLGWTFIQMFSLIEESFNEIW 130
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + RS + + + + ++ + + + + ++ + +
Sbjct: 131 HIKKSRSLIRKISDYISFFIFLPLLFITLNGLILFL----------LSKIKEIVFLYYIV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++++ I + ++L +P K++ I I++++ +F Y+T
Sbjct: 181 KNIFPLISMTIFFMALYLVMPNTMVKVLPAFIASIIVSIAFLLFQYIFILLQFLLIGYNT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y G + I L+++ + ILG +
Sbjct: 241 IYGGFSVIFIFLIWVRICWFIVILGVHI 268
>gi|282850971|ref|ZP_06260345.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|282557923|gb|EFB63511.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
Length = 188
Score = 92.2 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 63/153 (41%)
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ + R +F ++ I+ FVF + ++ F + + N R +
Sbjct: 13 NYLLARTFTFALSVILVAGFSIIIFVFTFGRQIMEFLAPIFNLSLWWVYKLENYRWPIII 72
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L I ++++ +P + + PGV FT SW + F Y+ F T Y +
Sbjct: 73 LMTVIINLYINYVIPNISVQKRVVWPGVCFTVASWGALSYFFGLYLRQFGTRWQNYGIVG 132
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S + +++L + +LG +NA+ RK
Sbjct: 133 SFIIFMLWLNIGSFLLLLGICINATGDELKDRK 165
>gi|257095643|ref|YP_003169284.1| ribonuclease BN [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257048167|gb|ACV37355.1| ribonuclease BN [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 280
Score = 92.2 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 108/277 (38%), Gaps = 15/277 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVV- 66
+ FVEE+ +++ ++ + LLS+ P + ++ + + + +
Sbjct: 9 RRFVLRVARRFVEENFDQISASLAFTTLLSLVPLVAVILSIVALVPFFPSMLDQLAQFLA 68
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE A I D +LQ + A + + ++A + + + N + V E R
Sbjct: 69 RSLLPERSAGMIIDYVLQ-FSHQAVNVTAVGSIALVATALLLLLTIERVFNHVWSVTETR 127
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W+ L +I + V + LA +LG L W R+
Sbjct: 128 PWWHR---------LRLFAGLIALWPLVIGGVLLATSYAVTTSLGWLDEPPWLRRLLFKA 178
Query: 187 LALFIGLIF---VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L L + +F ++ LP + + + +++ F Y+ F +Y+ +Y
Sbjct: 179 LGLMVASLFLGGLYHALPNTRVAPRDAACAGLVAALGFLLMQKAFELYLSNFPSYAAVYG 238
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A++ L++LY+ ++GA + A++ + ++
Sbjct: 239 AFATLPLFLLWLYLSWAVVLMGALVAATLPEFRAERE 275
>gi|300712573|ref|YP_003738386.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299126257|gb|ADJ16595.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 279
Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 95/258 (36%), Gaps = 19/258 (7%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F E++ +A I+ SA +S+ P ++F F+ Q VIDV + I
Sbjct: 17 FSEKNITFLAGSIAYSAFVSLVPLLMFVLLAVSFV-DPQLQQQVIDVATNNISPSVGGVI 75
Query: 79 TDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I Q A T I L + S + + + Y S+
Sbjct: 76 EVMIEQQSGAGAGSTITASIIGILTLVWGSLKVFRGIDTAFSEIYETTARESF----TGQ 131
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
LL VTL + V +A+ + + I ++ L I
Sbjct: 132 IKNGLLMLVTLTLGIVAVVVATNIVAFF--------SFVPFIEFVVPLVLVVGLVIAFFP 183
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ P + +LPG +F I W + VLF Y S + +ASI+ + +L
Sbjct: 184 MYYLFPEIDVEPRDVLPGTLFGAIGWAILQVLFQVYASLGGGDSNL---IASILLLVTWL 240
Query: 256 YMLGVFFILGAELNASMI 273
Y V +LGA +NA +I
Sbjct: 241 YFSAVILLLGAVINAVLI 258
>gi|294495615|ref|YP_003542108.1| ribonuclease BN [Methanohalophilus mahii DSM 5219]
gi|292666614|gb|ADE36463.1| ribonuclease BN [Methanohalophilus mahii DSM 5219]
Length = 281
Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 114/279 (40%), Gaps = 13/279 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL----GAHQFVPTVIDVV 66
+ + + H+ E+DG ++ +S ++S+ ++F ++ + + ID++
Sbjct: 7 LFRETLSHWNEDDGMTSSAALSFYLIVSLPAILLFSVSVGSYFLKARHLESAIIGYIDLM 66
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G + + + ++I + ++ A TIS L + N + ++ + V
Sbjct: 67 AGDTLIHMVEILLNQIPDIASLTAGA--TISFLLLVWAGGNLFRQFKKIIDNMWGVSSTE 124
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT- 185
S ++ + + + V +V F+ V L A+ + L LL YA+
Sbjct: 125 SDWLHNFLKKSFASVIGVFVV--GFLLVLNTLVEAFFLMGYGLLSELLPFNLRILQYASS 182
Query: 186 ---MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L L + I+V+ LP A+ + +L G FT + F Y+ +T+Y
Sbjct: 183 FSNFLILLMLFIYVYRVLPEARIDMRYVLEGSFFTVSLITIAKYFFAFYLSH-GNITTVY 241
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ SI+ L+++Y + AE+ R+KP
Sbjct: 242 GAIGSIIGFLLWVYFSFIAVTFAAEMINVRSKNVSREKP 280
>gi|167908634|ref|ZP_02495839.1| putative ribonuclease [Burkholderia pseudomallei NCTC 13177]
Length = 297
Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 257 GSFAVLLMWLYFSAAVLLL 275
>gi|154494809|ref|ZP_02033814.1| hypothetical protein PARMER_03851 [Parabacteroides merdae ATCC
43184]
gi|154085359|gb|EDN84404.1| hypothetical protein PARMER_03851 [Parabacteroides merdae ATCC
43184]
Length = 414
Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 108/271 (39%), Gaps = 9/271 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+E + + I A+ F E+ AS ++ S LLS+ P + +A G F
Sbjct: 1 MKELYINIIKTIILAVRGFQNENLQTKASALTYSTLLSIVPLLAVLLGIAKGFG---FQN 57
Query: 61 TVIDVVFGAWPEVIAKPIT--DEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLN 117
TV +F +P + + + L G + + + Y N + ++ + N
Sbjct: 58 TVRQELFDYFPGHEVELTKAFEFVESYLEQAQGGVIIGVGLILLFYTVVNLISSIEDTFN 117
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+++ + R WY L+ V + S + + + + L+ +I
Sbjct: 118 DIWQIQKSRPWYRKLSDYLALFLILPVLMTASSGLSIFLSTLQNSFISQYFFFTPLVELI 177
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N Y L + +++ LP K + ++ L I + I++ ++ + S
Sbjct: 178 LNITPY---LITILAFTGLYISLPNTKVRFVNGLVAGILSGIAFQFFQFIYISGQIWVSK 234
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ +Y A++ L++L + + + GAE+
Sbjct: 235 YNAIYGSFAALPLLLLWLQLSWLICLFGAEI 265
>gi|194293025|ref|YP_002008932.1| ribonuclease bn [Cupriavidus taiwanensis LMG 19424]
gi|193226929|emb|CAQ72880.1| putative ribonuclease BN [Cupriavidus taiwanensis LMG 19424]
Length = 307
Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 107/269 (39%), Gaps = 13/269 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
++ AI + + + +S L S+ P +V ++AG F GA + +
Sbjct: 22 LRVVGAAITSWFAHRAASKGAALSFYMLFSLAPILVLVISIAGLFFGAEAARGEIFAQLE 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEM- 125
G + A I + G+ + A + +++ L+ SL+ + V
Sbjct: 82 GLVGDQGAAAIEGILAATHRAGGSGMAALIATGILFVGATSAFAELKSSLDDIWHVPVPD 141
Query: 126 ----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWN 179
R TRL+SF VL+ + L++ V A+ + + + L + I +
Sbjct: 142 TAGWRQLLRTRLLSFSLVLVLAFMLLVSLIVNAALAVVERIWGQLWTQTWLAPVAEAISS 201
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+A + ALF + LP A+ + G + T + + +G L Y+ S +
Sbjct: 202 LFSFAVVTALF---AVIFKMLPNARIAWRDVTMGAVITALLFSIGKRLIGLYLGN-SAVA 257
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ Y S++ ++++Y F GAEL
Sbjct: 258 SSYGAAGSVVALMLWVYYSAQIFFFGAEL 286
>gi|256027382|ref|ZP_05441216.1| ribonuclease BN [Fusobacterium sp. D11]
gi|260494471|ref|ZP_05814601.1| ribonuclease BN [Fusobacterium sp. 3_1_33]
gi|289765346|ref|ZP_06524724.1| ribonuclease BN [Fusobacterium sp. D11]
gi|260197633|gb|EEW95150.1| ribonuclease BN [Fusobacterium sp. 3_1_33]
gi|289716901|gb|EFD80913.1| ribonuclease BN [Fusobacterium sp. D11]
Length = 416
Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/268 (13%), Positives = 101/268 (37%), Gaps = 12/268 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + ++ A E + + + +S +L++ P + +L+ + GA ++
Sbjct: 12 KFNTKNLKLMLKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIIN 71
Query: 62 VIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + + +TD +L + L + L + + S N +
Sbjct: 72 QIKDIAP-LKGGTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIW 130
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + RS + + + +I++ + + + + ++ + +
Sbjct: 131 HIKKSRSIIRKISDYISFFIFLPLLFIILNGLVLFL----------LSKIKEIVFLYYIV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++++ I + ++L +P KI+ + I++++ +F Y+T
Sbjct: 181 KNIFPLISMTIFFMALYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y G + I L+++ + ILG +
Sbjct: 241 VYGGFSVIFIFLIWVRICWFIVILGVHI 268
>gi|332667573|ref|YP_004450361.1| ribonuclease BN [Haliscomenobacter hydrossis DSM 1100]
gi|332336387|gb|AEE53488.1| ribonuclease BN [Haliscomenobacter hydrossis DSM 1100]
Length = 324
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 108/271 (39%), Gaps = 11/271 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F ++ A F+ ++G +++ ++ L S+ P ++ + L + +
Sbjct: 18 FLAFGRLLRLAAWEFLGDNGPKLSASLAYYTLFSMAPMLLIVIAIGSILLGKEAAEGYLY 77
Query: 65 VVFGAWPEVIAKP-ITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAY-- 120
+ F + + I V T + + + GV ++ S+N +
Sbjct: 78 LQFEGLMGTTGAIQLQELINNVRISGDTPWVTAVGILTFFLGATGVFIEIQDSINIIWSI 137
Query: 121 RVVEMRSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
R RSW TRL+SF V+ L++ + + L ++ + L II
Sbjct: 138 RAKPKRSWLRFITTRLVSFSMVVGIGFLLLVSLVLSATLSLLDNWISTNVISFAWLAYII 197
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N + +L LF + LP A+ K +L G FT + +++G + Y+ ST
Sbjct: 198 SNILTLSIVLLLF---AVIFKVLPDAQLKWKDVLVGSAFTAVLFLLGKYVINLYLSQ-ST 253
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++Y G +++ ++++Y GAE
Sbjct: 254 TLSVYGGAGAVVLIILWVYYSAFILYFGAEF 284
>gi|296328153|ref|ZP_06870684.1| ribonuclease BN [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296154665|gb|EFG95451.1| ribonuclease BN [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 416
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 92/259 (35%), Gaps = 12/259 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ A E + + + +S +L++ P + +L+ + GA +V I +
Sbjct: 21 MLKRAYEKYQRANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYVINQIKDIAP-L 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +TD +L G+ + L + + S N + + + RS
Sbjct: 80 KGGTLELLTDFSNNLLMNARSGVLAGVGFLFLGWTFIQMFSLIEESFNEIWHIKKSRSLI 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
S + F+ + + + + + + ++++
Sbjct: 140 RK----------ISDYISFFIFLPLLFITLNGLTLLLLSKIKETIFLYYIVKNILPLISM 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + ++L +P KI+ + I++++ +F Y T+Y G + I
Sbjct: 190 TIFFMALYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYDTVYGGFSVIF 249
Query: 250 TCLVFLYMLGVFFILGAEL 268
L+++ + ILG +
Sbjct: 250 IFLIWVRICWFIVILGVHI 268
>gi|94986256|ref|YP_605620.1| ribonuclease BN [Deinococcus geothermalis DSM 11300]
gi|94556537|gb|ABF46451.1| ribonuclease BN [Deinococcus geothermalis DSM 11300]
Length = 393
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 108/275 (39%), Gaps = 14/275 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F +F +I A F ++ +A+ I+ A+ S+ P ++F +AGF + + V +
Sbjct: 2 KFADLFGLIRGAALAFGQDKAPRLAAAIAYYAIFSIAPLLLFAVAVAGFFLSREAVLADL 61
Query: 64 ----DVVFGAWPEVIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ A + + L + ++ + ++ L+ +L+
Sbjct: 62 FGPNGLISQNLGASTADFLKGLVKPDALQQGSITATLVAFVTLFLGATGLFVQLQDALSS 121
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ R++SF +L L+ V A + +G
Sbjct: 122 MWGADPPPPGGFLKVVQARVVSFLLILSIGFILLTF---LVLNTYLSAIAQSLGDRIGVG 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ G + ++L L ++ FLPA K + + G + T + + VG V Y+
Sbjct: 179 AFFVRAGTLLLSVLLLTPVFALIYKFLPAVKLQWREVWVGSLVTAVLFTVGQVAIGFYLG 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+T S+++ S++ L+++Y + F GAE+
Sbjct: 239 RSAT-SSVFGVAGSLVALLLWIYYSAMIFFFGAEV 272
>gi|19704489|ref|NP_604051.1| ribonuclease BN [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19714763|gb|AAL95350.1| Ribonuclease BN [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 396
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 100/259 (38%), Gaps = 12/259 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 1 MLKRAYEKYQRANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAP-L 59
Query: 71 PEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
E + +TD +L + L + L + + S N + + + RS
Sbjct: 60 KEGTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEESFNEIWHIKKSRSLI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + +I++ + + + + ++ + + + ++++
Sbjct: 120 RKISDYISFFIFLPLLFIILNGLVLFL----------LSKIKEIVFLYYIVKNIFPLISM 169
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + ++L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 170 TIFFMALYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNTVYGGFSVIF 229
Query: 250 TCLVFLYMLGVFFILGAEL 268
L+++ + ILG +
Sbjct: 230 IFLIWVRICWFIVILGVHI 248
>gi|224024116|ref|ZP_03642482.1| hypothetical protein BACCOPRO_00837 [Bacteroides coprophilus DSM
18228]
gi|224017338|gb|EEF75350.1| hypothetical protein BACCOPRO_00837 [Bacteroides coprophilus DSM
18228]
Length = 439
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 103/269 (38%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ I+ +++ F+ + AS ++ S LLS+ P + +A G +
Sbjct: 28 LQRRLYSCIKIVILSVQQFLNDRIQVRASALTYSTLLSIIPILAILFAIARGFGFDAVIE 87
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRA 119
+ A+ + I L G+F + + + + + +S N
Sbjct: 88 AQ---FRHGMAKEQAELVISWINSYLQHAQSGVFIGVGLIMLLWTILILTDNIELSFNAI 144
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
++V R+ + F +LL + +VI S + + + + + F L +L +
Sbjct: 145 WQVKHPRTVFRKITDYFSMILLLPLLIVISSGLTIFMTTYIKDMENFL-VLAPVLKFLVR 203
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
YA +FIGL F+P K ++ I ++ + + + S Y+
Sbjct: 204 MIPYALTWGMFIGLFI---FIPNTKVRLQHAWLPGILAGSAFQAFQYFYINSQIWVSNYN 260
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A+I L++ + + GAE+
Sbjct: 261 AIYGSFAAIPMFLLWTQISWTICLFGAEM 289
>gi|34762413|ref|ZP_00143414.1| Ribonuclease BN [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887938|gb|EAA25005.1| Ribonuclease BN [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 396
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 101/259 (38%), Gaps = 12/259 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 1 MLKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAP-L 59
Query: 71 PEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +TD +L + L + L + + S N + + + RS
Sbjct: 60 KGGTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIWHIKKSRSLI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + +T +I++ + + + + ++ + + + ++++
Sbjct: 120 RKISDYISFFIFLPLTFIILNGLILFL----------LSKIKEIVFLYYIIKNILPLISM 169
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + V+L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 170 TIFFMAVYLVMPNTMVKIIPAFIASVIVSIAFLIFQYIFILLQFLLIGYNTVYGGFSVIF 229
Query: 250 TCLVFLYMLGVFFILGAEL 268
L+++ + ILGA +
Sbjct: 230 IFLIWVRICWFIVILGAHI 248
>gi|296106232|ref|YP_003617932.1| ribonuclease BN [Legionella pneumophila 2300/99 Alcoy]
gi|295648133|gb|ADG23980.1| ribonuclease BN [Legionella pneumophila 2300/99 Alcoy]
Length = 364
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 91/238 (38%), Gaps = 11/238 (4%)
Query: 43 IVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
+ G + Q V + +F + K + + Q + +K L +
Sbjct: 1 MSVGLAIFSSFPVFQGLAEPVQNFIFDNFVPATGKIVQSYLQQFTSQVSK-LSIWGVVFL 59
Query: 102 AYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA 161
+ + + + ++N+ +RV R L+ + + LA V L + +
Sbjct: 60 IFTALLVMFTIERAMNKIWRVSSSRHGVSAFLLYWAIISLAPVLLGLSLAASSYLFSMPI 119
Query: 162 YVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
P + Y+ IG F+++ +P KI G + I +
Sbjct: 120 LADHRAP---------YTILHYSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILF 170
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
F +Y++ ++TY +Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 171 ESAKHAFAYYLIRYNTYELLYGAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 228
>gi|292656690|ref|YP_003536587.1| ribonuclease BN-like protein [Haloferax volcanii DS2]
gi|291372769|gb|ADE04996.1| ribonuclease BN-like protein [Haloferax volcanii DS2]
Length = 352
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/272 (19%), Positives = 92/272 (33%), Gaps = 16/272 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + E MA I+ A +S+ P + G
Sbjct: 1 MNPRMTRALTLGRAIVYEVRTERLTFMAGSIAYGAFVSLLPLFLLVLAAVSATGDSGLRE 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI V+ I E+ + L + AL + + L + + Y
Sbjct: 61 GVIAVIQSVLTPGAGDVIVAELES--STQLASLSVVGALVLVWGTLRIFRGLDTAFSDIY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ +L V LV +S VA L + + ALG W
Sbjct: 119 ESEAANTF-------ADQLLDGIVVLVTVSLAVVAGALIESALPALDGALG------WVV 165
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ LF+ ++ P + ++PG + + LF Y+ FS+ +
Sbjct: 166 YRGLLVAVLFVTFYPMYYIFPDENVTSLEVVPGTLVAAVGLTTFESLFRLYVE-FSSRTP 224
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ +A I+ L +LY G+ +LGA +NA +
Sbjct: 225 ESSVVAGILVLLTWLYFSGLVILLGAAVNAVL 256
>gi|126660037|ref|ZP_01731159.1| serum resistance locus; BrkB [Cyanothece sp. CCY0110]
gi|126618715|gb|EAZ89462.1| serum resistance locus; BrkB [Cyanothece sp. CCY0110]
Length = 275
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 97/275 (35%), Gaps = 18/275 (6%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPEVIAKPITDE 81
M + +S A+ S+FP ++ ++ G + ++ P + +
Sbjct: 1 CIEMGAALSYYAIFSLFPILLVILSITGLILGPDTNAYTQILVFAKRGLPLEAYRIVEST 60
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR---AYRVVEMRSWYITRLISFGY 138
++Q L + G I +S AL ++++ Y R+ +I +I+F
Sbjct: 61 LVQ-LNESSLGAGIIGFSILFITASRIFRALGRAVDKIWKVYHHNYTRNGWIWTIINFIQ 119
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY------------ATM 186
+ + LV+ S + + L K F + + + T
Sbjct: 120 NQIIAFLLVLSSTALLLVSLLSNIALKVFLKIIKNVEQVITWFRVDEAFLWNSLQLGVTF 179
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L ++ ++ LPA K K I G + + + + L ++ ++ Y +
Sbjct: 180 FLLTSVVMVLYKTLPATKVKWSDIWIGALISVSLFSLLQSLVSNGVIRIGEQFRAYGIVG 239
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
M L+++++ F LG E + +K
Sbjct: 240 GFMVLLLWIFLTCQIFFLGCEFTYVYTHLFGSRKD 274
>gi|304399046|ref|ZP_07380915.1| ribonuclease BN [Pantoea sp. aB]
gi|304353506|gb|EFM17884.1| ribonuclease BN [Pantoea sp. aB]
Length = 262
Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 91/254 (35%), Gaps = 8/254 (3%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKPITDEI 82
A +++ +LL++ P I L + + VF + +
Sbjct: 1 MTTQAGNLAYVSLLALVPLIAVVFALFAAFPVFSDISVQLKQFVFNNLMPAAGNTLQRYL 60
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
Q +A + + + A+ + + ++ +LN +R + R + + + +L
Sbjct: 61 EQFVANVNR-MTAVGAVGLIVTALLLMHSVDTALNTIWRSNKKRPMVYSFAV-YWMILTL 118
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
L S + L+L ++ + ++ +L + ++ +P
Sbjct: 119 GPLLAGASLAISSYLLSLRWINA-----TGVTSLVDQMLRIFPLLLSWFAFWLLYSIVPT 173
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ L G + + +G F Y+ F +Y +Y LA I +++Y
Sbjct: 174 QRVPPRDALIGALVAGALFELGKKGFALYVTMFPSYQLIYGVLAVIPILFLWVYWTWCIV 233
Query: 263 ILGAELNASMIIYY 276
+LGAE+ ++ Y
Sbjct: 234 LLGAEITVALADYR 247
>gi|309379635|emb|CBX21806.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 395
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 87/259 (33%), Gaps = 20/259 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
F EE A+ ++ + LL++ P + + + V
Sbjct: 12 VARRFSEERVPQAAASMTFTTLLALVPVLTVTVAAVSVFPVFESWSGAFVSFVKQTVVPQ 71
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A + D + A L I ++ S V + + NR +RV R W +
Sbjct: 72 GADKVLDYL-DAFRRQAGSLTAIGSVMLFVTSLMLVRTIDQAFNRIWRVGAQRPWMMQ-- 128
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ + PL L G W R A L + L
Sbjct: 129 ------------FLVYWALLTCGPLFLGVGISLTAGWGE----SWLLRPLAMPLGTVLLL 172
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F+P L G + T + LF Y+ +F Y ++Y A++ L+
Sbjct: 173 WGLYCFVPNRFVPARHALIGAVATALCLWCARALFVWYMGSFDGYRSIYGAFAAVPFFLL 232
Query: 254 FLYMLGVFFILGAELNASM 272
+L +L + GA L AS+
Sbjct: 233 WLNLLWTLVLGGAVLTASL 251
>gi|332289613|ref|YP_004420465.1| ribonuclease BN [Gallibacterium anatis UMN179]
gi|330432509|gb|AEC17568.1| ribonuclease BN [Gallibacterium anatis UMN179]
Length = 309
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 113/281 (40%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
++ + +I F + A +++ S L++ P ++ + V
Sbjct: 5 LQHLIQHLIILIKVFSYKFNQNKLSQAAGYLTYSTTLAIVPLLMVIFAFFAAFPVFNDVV 64
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+F + ++ + I +A K + IS + + ++++ +LN
Sbjct: 65 QDFQQFIFSNFAPSVSHTVEQYITVFIANTKK-MSGISIIGLIIVALMLIKSIDTTLNDI 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + RS + S +++L + I + + V+ L + + + L L ++
Sbjct: 124 WSNSKKRSTLYS--FSIYWMILTLGPIFIATSIGVSSYLFSSSIFTYKTGLPFGLKLL-- 179
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L ++ ++ +P K + G + I + +G FT Y+ +F +Y
Sbjct: 180 --SFVPFLLSWLAFTCIYAIVPNTKVNVKHAACGALIAAIFFTLGKACFTWYMKSFPSYQ 237
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA++ ++++++ F +LGA+L A + KK
Sbjct: 238 LIYGALATLPIMILWIHLSWTFILLGAQLTAVLDDLDKMKK 278
>gi|153003611|ref|YP_001377936.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
gi|152027184|gb|ABS24952.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
Length = 434
Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/268 (11%), Positives = 88/268 (32%), Gaps = 14/268 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPT 61
+ + A+ + A ++ L ++ P +V ++ F G +
Sbjct: 13 RLLRSTWRALGTALRVLESDTVRLRAMALTYITLFALVPALVVAFSVVQAFTGMDRISDL 72
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + + + + + ++ A + + + + + ++N +
Sbjct: 73 VHEFLISNLAVGARDTLEPYLQRFVSNAHATSAGIVGGALLVWSAISLFTNVDAAVNDIW 132
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R + Y + ++ ++++ A++ I
Sbjct: 133 GVKRRRPLSQQ---AVIYWMGITLGPLLLAGSLTLAATGRAFLAG---------TGIRAL 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + L V+L +P K +I S + + ++W + + I Y
Sbjct: 181 AVAGSALLTCAFFALVYLLVPYTKVRIKSAVIAGLAAGVAWELAKWAYALGIGGIVRYHA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y +A++ + +L++ + GA L
Sbjct: 241 IYGSVAAVPIFIFWLFVSWSIVLFGARL 268
>gi|281356223|ref|ZP_06242716.1| ribonuclease BN [Victivallis vadensis ATCC BAA-548]
gi|281317592|gb|EFB01613.1| ribonuclease BN [Victivallis vadensis ATCC BAA-548]
Length = 437
Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 99/269 (36%), Gaps = 9/269 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ Y + + + A ++ L +V P + +A + ++
Sbjct: 25 LGKLSRTFYCSARRYGSDHQSQRAVALTYYTLFAVVPVMALVFGIAKGFSLEDKLQVFLE 84
Query: 65 VVFGAWPEV---IAKPITDEILQVLAVPAKGLFTISALAA-AYFSSNGVEALRISLNRAY 120
F +V I + + + G+ I+ + + +SN + + N +
Sbjct: 85 EKFANHQDVLNWIYQFADTTLKEAQGGVVAGVGVIALIWTVIWLASN----IERAFNAVW 140
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ ++ + +L+ + LV+MS V + + ++ P LG I+++
Sbjct: 141 NLPTRKNMFRRFSDYLAIILVTPIILVVMSSAGVFMRSMMGHILAGMPWLGGAGFILFSI 200
Query: 181 RI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I +L + + ++ +P K + S L I + + + F + Y+
Sbjct: 201 MIKLFPLLLVILLFTLIYFLVPNTKVRFGSALLSGIVAGMLYQLLQDGFIYVQSALYRYN 260
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T+Y A++ L++L + GAE+
Sbjct: 261 TIYGSFAALPLFLIWLQWSWQIALFGAEI 289
>gi|159899321|ref|YP_001545568.1| ribonuclease BN [Herpetosiphon aurantiacus ATCC 23779]
gi|159892360|gb|ABX05440.1| ribonuclease BN [Herpetosiphon aurantiacus ATCC 23779]
Length = 368
Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 107/280 (38%), Gaps = 22/280 (7%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF---------LGAHQFV 59
+ + + + +D MA+ ++ A+ S+FP I+ ++ GF A + +
Sbjct: 10 WPLTQRTFKAWTVDDCSRMAASLAYYAVFSIFPLILLLLSILGFWLRLQGDTNTNAEETL 69
Query: 60 PTVIDVVFGAWP-----EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+ VF P + + EIL+ L+ A I+ + +S +
Sbjct: 70 VNSLMQVFQTSPQVGVDDSAIRTALTEILKSLSQQAGTNAPIALATTFFAASGIFVQIDK 129
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ + + + + ++ + S + LV++ + + L L+ V + L
Sbjct: 130 AFDVIWDIQPQQGNFLHTVKSTLIERGKAFALVLVIGLLLISSLILSSVLQALENLSKSF 189
Query: 175 LII-----WNGRIYATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
+ W +AT A+ + + +P K + +LPG I T W +G ++
Sbjct: 190 DLPGVGVGWQIFTFATAFAINVLVFFLLFFAMPKPKMRWRDVLPGAILTAALWEIGKIVL 249
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ ++ ++ +A+ + L ++Y GAE
Sbjct: 250 SLFLGGNKYTAST--TVAAFIALLAWIYYASQIIFFGAEF 287
>gi|296315119|ref|ZP_06865060.1| YihY family protein [Neisseria polysaccharea ATCC 43768]
gi|296838033|gb|EFH21971.1| YihY family protein [Neisseria polysaccharea ATCC 43768]
Length = 406
Score = 91.1 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 88/259 (33%), Gaps = 20/259 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
F EE A+ ++ + LL++ P + + + +
Sbjct: 23 VARRFSEERVPQAAASMTFTTLLALVPVLTVTVAAVSVFPVFENWSGAFVSFIKQTVVPQ 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A + D + A L I ++ S V + + NR +RV R W + L
Sbjct: 83 GADKVLDYL-DAFRRQAGSLTAIGSVMLFVTSLMLVRTIDQAFNRIWRVGAQRPWMMQFL 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + LL PL L G W R A L + L
Sbjct: 142 V--YWTLLTC------------GPLFLGVGISLTAGWGE----SWLLRPLAMPLGTVLLL 183
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F+P L G T + LF Y+ +F Y ++Y A++ L+
Sbjct: 184 WGLYCFVPNRFVPARHALIGAAATALCLWCARALFVWYMGSFDGYRSIYGTFAAVPFFLL 243
Query: 254 FLYMLGVFFILGAELNASM 272
+L +L + GA L AS+
Sbjct: 244 WLNLLWTLVLGGAVLTASL 262
>gi|237742078|ref|ZP_04572559.1| ribonuclease BN [Fusobacterium sp. 4_1_13]
gi|229429726|gb|EEO39938.1| ribonuclease BN [Fusobacterium sp. 4_1_13]
Length = 396
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 101/259 (38%), Gaps = 12/259 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 1 MLKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAP-L 59
Query: 71 PEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +TD +L + L + L + + S N + + + RS
Sbjct: 60 KGGTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIWHIKKSRSLI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + +T +I++ + + + + ++ + + + ++++
Sbjct: 120 RKISDYISFFIFLPLTFIILNGLILFL----------LSKIKEIVFLYYIIKNIFPLISM 169
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + V+L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 170 TIFFMAVYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNTVYGGFSVIF 229
Query: 250 TCLVFLYMLGVFFILGAEL 268
L+++ + ILGA +
Sbjct: 230 IFLIWVRICWFIVILGAHI 248
>gi|149919656|ref|ZP_01908135.1| Ribonuclease BN [Plesiocystis pacifica SIR-1]
gi|149819599|gb|EDM79027.1| Ribonuclease BN [Plesiocystis pacifica SIR-1]
Length = 507
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 104/268 (38%), Gaps = 27/268 (10%)
Query: 6 CIVFDIIYDAIEH-FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ +I + V + ++AS ++L L S+ P + F T ++
Sbjct: 33 RRIWLLITYTLRRWLVTDRSPSLASSLTLQTLFSIVPAAGVILFFMSKI-DPTFGSTFVE 91
Query: 65 VVFGAW-PEVI-AKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ A P+ A I D ++++ + L + L + L ++N +R
Sbjct: 92 LAATALGPDSTQASEIGDTVVRLAEAVNLQELGSWGLLVIVVLAYMAFSTLENTVNDIWR 151
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R+ + Y L P+ + F +L +L +
Sbjct: 152 ISKSRTIVAK--FTMFYTLA------------TLGPIII------FYSLAQPVLAQVSAW 191
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV--TFSTYS 239
+ ++ IGLI ++ FLP + + + G + + + G + F Y+ STY
Sbjct: 192 VVTPVVTTSIGLILLNRFLPNVNVRWRAAVIGGLLSAALFEFGKIAFGQYLSLVAISTYR 251
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAE 267
+Y LA + +V+ Y+ + +LGAE
Sbjct: 252 GLYGSLAILPVFIVWAYVSWMIVLLGAE 279
>gi|186470500|ref|YP_001861818.1| ribonuclease BN [Burkholderia phymatum STM815]
gi|184196809|gb|ACC74772.1| ribonuclease BN [Burkholderia phymatum STM815]
Length = 305
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/264 (18%), Positives = 88/264 (33%), Gaps = 5/264 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWP 71
D I F M S I+ S+ P ++ + G F G + V
Sbjct: 26 KDTIGRFSNHRCAMMGSSIAFYCAFSLAPTLLIVLAVLGWFFGQDAAQGRLFGQVKDIVG 85
Query: 72 EVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMRSW-- 128
A + + A G IS + A +S +L +L+ + V +
Sbjct: 86 TEAASAMQAIVEHAHRSHAGGFAALISVVLLAVGASATFSSLNTALDVVFAVRAPKGIAG 145
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
L + L + L + V + + +A+ V L + +
Sbjct: 146 VALLLRARLVSLGLVMGLAFLLVVSLVVDVAIQTVGSMLFGTDALNAFADAAQSVFGLAL 205
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L +GL + +LP + G + G LF Y+ T S+
Sbjct: 206 LTVGLGALIKWLPDTHVAWRPAVVGGFVAAFLFTAGRHLFVLYLAHAGTAGAF-GAAGSL 264
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+++LY V F+LGAE+ A++
Sbjct: 265 AVLMMWLYFCAVVFLLGAEVTATL 288
>gi|82546232|ref|YP_410179.1| ribonuclease BN [Shigella boydii Sb227]
gi|81247643|gb|ABB68351.1| tRNA processing exoribonuclease BN [Shigella boydii Sb227]
gi|332088239|gb|EGI93359.1| tRNA-processing ribonuclease BN [Shigella boydii 3594-74]
Length = 250
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 87/247 (35%), Gaps = 10/247 (4%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
+LLS+ P + L V + +F + I I Q +A K +
Sbjct: 3 SLLSLVPLVAVVFALFAAFPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNK-M 61
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
+ A + + ++ +LN +R R Y ++ + +
Sbjct: 62 TAVGACGLIVTALLLMYSIDSALNTIWRSKRARPKI--------YSFAVYWMILTLGPLL 113
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
LA++ +L +I N +L +I ++ +P + + G
Sbjct: 114 AGASLAISSYLLSLRWASDLNTVIDNVLRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVG 173
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + G F YI F +Y +Y LA I V++Y +LGAE+ ++
Sbjct: 174 AFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLG 233
Query: 274 IYYWRKK 280
Y+ K+
Sbjct: 234 EYHKLKQ 240
>gi|198275892|ref|ZP_03208423.1| hypothetical protein BACPLE_02074 [Bacteroides plebeius DSM 17135]
gi|198271521|gb|EDY95791.1| hypothetical protein BACPLE_02074 [Bacteroides plebeius DSM 17135]
Length = 438
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 104/269 (38%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ IIY +I F+ + AS ++ S LLS+ P + +A G +
Sbjct: 27 LQWKVYTCLKIIYLSINQFINDRIVVRASALTYSTLLSIIPILALLFAIARGFGFDTLIE 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRA 119
+ A+ + I L G+F + + ++ + S N
Sbjct: 87 SQ---FRSGVTGAQAELVISWINSYLEHAQSGVFIGVGLIMLLGTVLLLIDNIERSFNAI 143
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
++V + R + +LL V LVI S + + + + ++ F L +L
Sbjct: 144 WQVKKPRGLFRQITDYSSLILLLPVLLVISSGLSIFMSTYVKELQNFM-VLAPVLKFFVR 202
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
YA + +FIG +++F+P K K+ I ++ + + + S Y+
Sbjct: 203 LIPYALIWGMFIG---LYIFMPNTKVKLAHAWLPGILAGSAFQAFQYFYINSQIWVSNYN 259
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A+I L++ + + GAE+
Sbjct: 260 AIYGSFAAIPLFLLWTQISWSICLFGAEM 288
>gi|92113961|ref|YP_573889.1| ribonuclease BN, putative [Chromohalobacter salexigens DSM 3043]
gi|91797051|gb|ABE59190.1| ribonuclease BN, putative [Chromohalobacter salexigens DSM 3043]
Length = 301
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGAWPEVIAKPI 78
+E + ++ A ++ L S+ P I+ + G LG ++ + + A +
Sbjct: 3 LEHNAFSYAGSLAFYTLFSLAPTIIIAVTVIGLILGEEAAQGQIVAQLQDTMGQDAAMAV 62
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVVEMRS------WYIT 131
+ Q + L T+ + A + V A ++ SLN + V +
Sbjct: 63 QQAVAQSRLESSGLLPTLLGIGALVVGATTVFAQMQFSLNTLWGVTARPDRNSVLLFIKQ 122
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R++S VL L++ + V + Y + P + LL ++ + +
Sbjct: 123 RMLSLTVVLAVGFILMVSLVLGVLLRAFFMYASDWVPGVNALLG---GAEFIVSLAVIAL 179
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ LP ++ G I T + + +G + ++ ++ Y S++
Sbjct: 180 FFAAIFKVLPDVVVSWRDVMVGAIVTAVLFAIGRYGIAA-YLAYTATASTYGAAGSVVLI 238
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L+++Y + + GA + + ++
Sbjct: 239 LLWVYYSSLILLYGAAFTRTHLEARGKR 266
>gi|159902649|ref|YP_001549993.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9211]
gi|159887825|gb|ABX08039.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9211]
Length = 313
Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 101/284 (35%), Gaps = 21/284 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
+ ++ A + +++ + L S FP ++ ++A +
Sbjct: 6 KSQLRWFLRSLWQASRRWNRCHCVDLSAAFAYYTLQSFFPILLISLSVASWFLGKQQGLD 65
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I + P + + +++++ G + A+ + N L+ +R
Sbjct: 66 QQIIGLAAQVLPPSVVGLVDTTLVKLV-NQRFGAGILGAMFLVITAGNAYLTLQRGSDRL 124
Query: 120 YRV------VEMR------SWYITRLISFGYVLLASVTLV---IMSFVFVAIPLALAYVR 164
+ E + R+ +F VLL +V I ++V + ++
Sbjct: 125 WEDALPTKPDETPFRMQAFRFIRNRIEAFLVVLLVGFLMVLDEISAYVRLIPGAVWTDLK 184
Query: 165 KFFPALGNLLL---IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
P + N L +I G+I + + + +P K + ++PG I +
Sbjct: 185 NNSPEIANTLSKIPVIEVGQIIIPFIGFSVMAFLLQYLVPPRKVPMRPLIPGSIMIGVLL 244
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + I++ + Y ++ ++ ++++++G+ G
Sbjct: 245 TILNSAVSRTILSLGSRFQAYGIISGVLVLTLWIWIVGLILYFG 288
>gi|311108697|ref|YP_003981550.1| ribonuclease BN-like family protein 2 [Achromobacter xylosoxidans
A8]
gi|310763386|gb|ADP18835.1| ribonuclease BN-like family protein 2 [Achromobacter xylosoxidans
A8]
Length = 308
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 105/275 (38%), Gaps = 9/275 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGA 69
++ D+ + + + + ++L + S+ P ++ +AG F G + +
Sbjct: 19 LLMDSAKQWSTHRASSKGAALALYMVFSLAPMLILVIAVAGAFFGEDAVRSELFTQLRDL 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ A+ I + + IS + ++ L+ SL+ + V +
Sbjct: 79 IGDRGAEVIQTVLASAHESGGGWIAALISIFVLIFSATTAFAELKASLDELWEVSANQKS 138
Query: 127 ---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+R++SFG VL+ ++ L++ V + A +Y + A L+ W +
Sbjct: 139 GLHGMVRSRMLSFGLVLVLALFLLVSLSVNAGLAAARSYYGDLWTASSFALVAEWISNFF 198
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + LP+AK ++PG I T ++VG Y+ + Y
Sbjct: 199 -SFSIVVALFAVIFKLLPSAKISWPDVIPGAIVTAALFLVGKWGIGVYLSR-GAAVSAYG 256
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
S++ L+++Y F GA + + R
Sbjct: 257 AAGSLIALLLWIYYSAQIFFFGAVFTRQFALRFGR 291
>gi|332300369|ref|YP_004442290.1| ribonuclease BN [Porphyromonas asaccharolytica DSM 20707]
gi|332177432|gb|AEE13122.1| ribonuclease BN [Porphyromonas asaccharolytica DSM 20707]
Length = 484
Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 98/270 (36%), Gaps = 9/270 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +Y AI+ ++++ AS ++ LS+ P + A G F T
Sbjct: 62 RRLYINTLKALYMAIKGYIDQRLSRHASALTYRTFLSIVPMLALLVAFAKGFG---FQDT 118
Query: 62 VIDVVFGAWP--EVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
+ D + P + + + L GL + + Y ++ + + N
Sbjct: 119 IYDFLMTYMPGHQNELDTMMGFVENYLGQVQGGLFLGVGLVLFLYTIFLLLDTIEQTFNV 178
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ V RS V+L + + + S + V + + + +
Sbjct: 179 IWGVPRGRSIGRKLTDYITMVVLLPILMTLSSGLTVMMATIKNTWFNDYIFFTPVWEFML 238
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
Y ++ +F G+ LP + K + L ++ + L+ I+ S Y
Sbjct: 239 KLFPYVILIFMFAGIFMA---LPNTRVKFLPALISGAIAGSAFQILQALYVSGILWISKY 295
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +Y G A+I L++L ++ + A+L
Sbjct: 296 NAIYGGFAAIPLLLLWLQVVWSITLFSAKL 325
>gi|116622079|ref|YP_824235.1| ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
gi|116225241|gb|ABJ83950.1| ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
Length = 287
Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 108/278 (38%), Gaps = 15/278 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGA 69
I + + ++ + M + ++ LS+ P +V +AG GA ++ + G
Sbjct: 4 FIGETLRNWHRDRAPRMGAALAYYITLSLAPTLVIVLAIAGLAFGAKAAQGRLVWQIQGL 63
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFS-SNGVEALRISLNRAYRVVEMR-- 126
AK I I A + L T+ LA +F + V LR +LN +++ +
Sbjct: 64 VGHEGAKVIQALIDGTRAPYSGMLATLIGLATLFFGGTAAVTELRDALNTIWQIPDDVQA 123
Query: 127 -------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ R +F VL+A V L++ + I A+ Y R A ++I +
Sbjct: 124 SHARNLFNVIKERFQAFALVLVAGVVLLLSVILHAWISAAVKYFRLAGTAPP---VLIHS 180
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L + + FLPA K + G + T I + G Y+ + ++
Sbjct: 181 FDWSVSFALLTLLFASIFKFLPAVDLKWQDVAAGAVVTSILFTAGKFFLGVYLTE-AGFA 239
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y S++ LV++Y LGAE I +
Sbjct: 240 ENYGAAGSLVMLLVWVYYSAQVVFLGAEFTQVYAIRFG 277
>gi|119718767|ref|YP_925732.1| ribonuclease BN [Nocardioides sp. JS614]
gi|119539428|gb|ABL84045.1| ribonuclease BN [Nocardioides sp. JS614]
Length = 349
Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 112/271 (41%), Gaps = 19/271 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
I + ++ G +A+ I+ A +++FP ++ G ++ GF+ G ++D +P
Sbjct: 24 VIYKYSDDQGNYLAAIITYYAFIAIFPLLLLGTSILGFILQGNPGLESDLLDSALSQFP- 82
Query: 73 VIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SWY 129
I D++ Q + I AL A Y S +AL+ +LN A+ V R +
Sbjct: 83 ----IIGDQLGQPEGLQGSTAGVVIGALVALYGSLGLGQALQNALNIAWSVPRNRRPNPL 138
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ RL S G +L A V L+++S L+ + LG + + A++L +
Sbjct: 139 LLRLKSLGLLLTAGVALLVLS--------ILSALASSTEVLGGTIASYRWPIVIASVLVI 190
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASI 248
L + F A + LPG + W T Y+ + S M +
Sbjct: 191 TTVLAVLFQFGVARSHDFRAALPGAFTVAVLWQTLQYFGTLYVTNVLTGTSQMNQTFGLV 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + L++ V ++G E+N + W +
Sbjct: 251 LGLIGILFIAAVMGVIGIEVNVVLSHRLWPR 281
>gi|307822337|ref|ZP_07652569.1| ribonuclease BN [Methylobacter tundripaludum SV96]
gi|307736903|gb|EFO07748.1| ribonuclease BN [Methylobacter tundripaludum SV96]
Length = 437
Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 103/279 (36%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ I +++ F ++ AS ++L +LLS+ P I +A G + +
Sbjct: 25 KAIIIKSLKIAILSVQGFSQDLCPLRASALTLYSLLSIVPVIAMLFGIAKGFGFEKMLEQ 84
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + I+ + + + + I + + + + + S N ++
Sbjct: 85 RLIEQAPERDTLVLQLISFAQNLLDSTKSGVIAGIGIVILFWTIISVIGNIEESFNHIWK 144
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R+ +LLA V L+ + V + + + ++ ++
Sbjct: 145 IGKGRAISRKFSDYLSLMLLAPVILIASGSIAVLLNIKITWLITIIELPEFGTWLVIKAL 204
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + F +F+P K + + + T I + + + + S Y+ +
Sbjct: 205 GLLPLALMIGLFAFTFIFMPNHKINCRAGIIAGVATGIMYHLVQWAYLSLQIGVSNYNAI 264
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y A++ +V+L + +LG E+ + Y +
Sbjct: 265 YGSFAALPLFVVWLQTGWMIVLLGCEVAFFLQNYEIYRN 303
>gi|189347021|ref|YP_001943550.1| ribonuclease BN [Chlorobium limicola DSM 245]
gi|288559230|sp|B3EDE6|Y1521_CHLL2 RecName: Full=UPF0761 membrane protein Clim_1521
gi|189341168|gb|ACD90571.1| ribonuclease BN [Chlorobium limicola DSM 245]
Length = 441
Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 102/269 (37%), Gaps = 12/269 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++EYF + + H + + A ++ LLS+ PF+ ++ +
Sbjct: 34 LQEYFRKLMPFFLKNLRH---DKIFLSAGSLAFQTLLSIVPFLAVTLSVLRIFSFFASLN 90
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ +F + + + + + + I L + + + + +LN
Sbjct: 91 RYLEEFIFQNFIPSAGEDLRIHFEAFIGKTST-VPLIGGLLLFIIALSLISTIDRTLNDI 149
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
++V R + L +V L + + + A +YV G LL +
Sbjct: 150 WKVRAPRKPIQ------AFTLYWTV-LTLGPVLIGSSLGASSYVWYTVFTEGPLLELKIR 202
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + + + +++ +P + K+ G + + + + F Y+ F+T+
Sbjct: 203 LISFLPFVNSLLSFLLLYMLVPNRRVKLPHAFSGAVAAALLFELSKKWFVFYVSRFATFE 262
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y ++++ ++Y+ + + GAEL
Sbjct: 263 HIYGAISAVPLLFFWIYIGWLVVLTGAEL 291
>gi|119357454|ref|YP_912098.1| putative ribonuclease BN [Chlorobium phaeobacteroides DSM 266]
gi|288559225|sp|A1BGZ7|Y1653_CHLPD RecName: Full=UPF0761 membrane protein Cpha266_1653
gi|119354803|gb|ABL65674.1| tRNA-processing RNAse BN [Chlorobium phaeobacteroides DSM 266]
Length = 449
Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 97/255 (38%), Gaps = 9/255 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
++F+ + + A ++ +LLS+ P + ++ + + + D V +
Sbjct: 56 FWKNFIHDKIFLSAGSLAFQSLLSLVPLLSVTLSILRVFPVFESLNRYLEDYVLQNFIPG 115
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + + + + + + + + + + +LN + V R
Sbjct: 116 TGTMLREYLNAFIDKTSS-VPLLGVVFLFIIALSLISTIDHTLNEIWEVYAPRKIVQ--- 171
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
G+ L +V L + + + +A ++V G LL + + L I
Sbjct: 172 ---GFTLYWTV-LTLGPVLIGSSLVASSFVWYTVFTEGPLLELKTRLLSFLPFLNSVIAF 227
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P + + + G + + + + F Y+ F+T+ +Y L+ I
Sbjct: 228 FLLYMLVPNRRVRFYHAVYGSLLAAVLFELSKKWFVFYVSHFATFEYIYGALSVIPMLFF 287
Query: 254 FLYMLGVFFILGAEL 268
++Y+ V + GAE
Sbjct: 288 WIYLEWVVVLTGAEF 302
>gi|182414042|ref|YP_001819108.1| ribonuclease BN [Opitutus terrae PB90-1]
gi|177841256|gb|ACB75508.1| ribonuclease BN [Opitutus terrae PB90-1]
Length = 298
Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 98/275 (35%), Gaps = 5/275 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGA 69
++++ I+ + + + + ++ ++V P +V +A Q ++ +
Sbjct: 1 MVWETIKAYYFDKVPQLGAALAFYTTVAVAPLLVLAVAVAEIVFKEEQARRRILGEIENL 60
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVE-MRS 127
++ + TI +LA + V L+ +LN +R
Sbjct: 61 VGSDASRALAQVEPPNYGSDTATFATIVSLATLMVGAVFVFVHLQDALNTIWRAPAYTGE 120
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYATM 186
++ + + L A + + V + + AL ++ + +L L +W +
Sbjct: 121 GWLATVKRRLFSLGAVLATGFIMLVSLTLSAALTWLGENASSLAELPTGVWQTLNFTFSF 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + LP + + + G T + +V+G + Y+ S+ ++ Y
Sbjct: 181 GVITFLFAIIFKLLPDVEVRWRDVGTGAAVTALLFVLGKTVLGLYLAR-SSVTSAYGAAG 239
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S + L++ Y LGAE +KP
Sbjct: 240 SAIALLLWCYYAAQILFLGAEFTRIHARTAGGRKP 274
>gi|254513820|ref|ZP_05125881.1| tRNA-processing ribonuclease BN [gamma proteobacterium NOR5-3]
gi|219676063|gb|EED32428.1| tRNA-processing ribonuclease BN [gamma proteobacterium NOR5-3]
Length = 406
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 103/277 (37%), Gaps = 8/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ + + A+ ++ +L ++ P + +A + A Q + + I
Sbjct: 8 LQKLWRRALYLAARYKSDRCRDTAAALTYMSLFALVPLLTVLYTMASAVPAFQGLESSIQ 67
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++F + I + + + AK L + + + + N +R
Sbjct: 68 GLLFENLLPETSAGIEEYVSD-FSRQAKNLTGFGIAFLMATAVLMLRNIEQAFNLIWRTR 126
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + L+ + + LA +T+ + V + + ++ +++ +
Sbjct: 127 GNRGTVSSFLLYWAILSLAPITIGLGLGVSTFLASFAGQLEQW-----DIIGVGALLLRM 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L +G V+ +P + + L G + S+ + LFT + S+ + +Y
Sbjct: 182 LPYLLQIVGFTLVYAAVPNCRVPLKHALVGGVIAASSFNIARALFTKLVAG-SSITFIYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A++ L+++Y+ + ++ A + S+ Y +
Sbjct: 241 AFAAVPLFLLWIYISWIIVLVSAIVVHSLSAYQSEAQ 277
>gi|91775562|ref|YP_545318.1| ribonuclease BN [Methylobacillus flagellatus KT]
gi|91709549|gb|ABE49477.1| ribonuclease BN [Methylobacillus flagellatus KT]
Length = 312
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 103/276 (37%), Gaps = 12/276 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTV 62
+ ++ ++ + + + ++ + S+ P +V +AG+ G +
Sbjct: 16 RLKCLRQLLVQSVLSWFSHRATSKGAALAFYTMFSLTPILVLVIAIAGYFLGERAAHGEI 75
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
+ + E A+ I + + + + T+ A A + + V A L+ SL+ +
Sbjct: 76 VAQISDLVGESGAQVIQSMLAKSSNPKSGIVATLIASALLFIGATTVFAELKASLDEVWE 135
Query: 122 VVEM---------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
V + + TRL+SF ++ + L+ V + L + +F
Sbjct: 136 VSKDTARGGKAAIGNLVKTRLLSFSIIVSLAFLLLTSLLVNAGLALVEQFFAEFVGRFIT 195
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ + + + + + LP K + G FT I + +G L Y+
Sbjct: 196 AIGVFKHISALVSFGVITSMFAVIFKMLPDVKLPWSDVWIGAAFTAILFSLGKYLIGIYL 255
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S ++ + S++ L+++Y F GAE+
Sbjct: 256 GN-SAVASSFGAAGSLIALLLWVYYSAQIFFFGAEI 290
>gi|294673735|ref|YP_003574351.1| YihY family protein [Prevotella ruminicola 23]
gi|294473194|gb|ADE82583.1| YihY family protein [Prevotella ruminicola 23]
Length = 307
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 104/266 (39%), Gaps = 6/266 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ + I F + AS ++ S LL++ P + +A G ++++
Sbjct: 2 TLKKIYRTLVLTIRFFTTKRVMTQASALTYSTLLAIVPILAVIFAIARGFGYNKYIEIWF 61
Query: 64 DVVFGAWPEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P +A +TD + ++ + + L Y V + + N ++V
Sbjct: 62 RDALSSQP-QVADILTDFVNSYLIHTQSGIFLGVGLLFMLYTVLMLVNNVEETFNEIWQV 120
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R + + + +V+ + + +A + + + L +
Sbjct: 121 SNARPIMRSLTNYMAMFFVFPIIIVVSMGLSIF----MATIAQHTDGVVILGRAVRYLLD 176
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ L L + + +++++P KI S + I + ++ + + + H + + Y+ +Y
Sbjct: 177 FSPYLLLSLLFVGLYVYMPNTDVKIKSAIVPGILSGVAMQLLQLFYIHSQIWVTGYNAIY 236
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
A++ +++L + + GA+L
Sbjct: 237 GSFAALPLFMLWLQISWTICLFGAQL 262
>gi|261401304|ref|ZP_05987429.1| YihY family protein [Neisseria lactamica ATCC 23970]
gi|269208682|gb|EEZ75137.1| YihY family protein [Neisseria lactamica ATCC 23970]
Length = 406
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 86/259 (33%), Gaps = 20/259 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
F EE A+ ++ + LL++ P + + + V
Sbjct: 23 VARRFSEERVPQAAASMTFTTLLALVPVLTVTVAAVSVFPVFESWSGAFVSFVKQTVVPQ 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A + D + A L I ++ S V + + NR +RV R W +
Sbjct: 83 GADKVLDYL-DAFRRQAGSLTAIGSVMLFVTSLMLVRTIDQAFNRIWRVGAQRPWMMQ-- 139
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ + PL L G W R A L + L
Sbjct: 140 ------------FLVYWALLTCGPLFLGVGISLTAGWGE----SWLLRPLAMPLGTVLLL 183
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F+P L G T + +F Y+ +F Y ++Y A++ L+
Sbjct: 184 WGLYCFVPNRFVPARHALIGAAATALCLWCARAVFVWYMGSFDGYRSIYGAFAAVPFFLL 243
Query: 254 FLYMLGVFFILGAELNASM 272
+L +L + GA L AS+
Sbjct: 244 WLNLLWTLVLGGAVLTASL 262
>gi|319792619|ref|YP_004154259.1| ribonuclease bn [Variovorax paradoxus EPS]
gi|315595082|gb|ADU36148.1| ribonuclease BN [Variovorax paradoxus EPS]
Length = 317
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 105/274 (38%), Gaps = 6/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF-GANLAGFLGAHQFVPTVI 63
+DA++ F G +A ++ ALLS+ P ++ ++ + + + T+
Sbjct: 14 LRHPLRFFWDALKAFRANQGLLLAGAVAYYALLSIVPLLIVSVIAMSHVIEQAELLRTIG 73
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P +K I E+ L + + + +FSS L ++ +
Sbjct: 74 RYLEWLLPGQ-SKAIVTELSSFLDHRDV-MGPVLLVTMIFFSSLAFSILESAMAVIFHHR 131
Query: 124 E---MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R + ++ + + Y+L V L++++ V A+ L F +L +
Sbjct: 132 KADHKRHFLVSVAMPYIYILCLCVGLLLVTLVSGALQLVGQESVDLFGREWSLSGVSGLL 191
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L ++L +PA + + L G + + W + Y T S +
Sbjct: 192 LYLLGLGGEIFMLTSLYLVMPAGRMSLRHALLGGVTAALLWEATRRVLIWYFSTLSQVNV 251
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y L + + L+ L + +LGA++ A
Sbjct: 252 VYGSLTTAIVVLLSLEIAATLVLLGAQVIAQYER 285
>gi|298244678|ref|ZP_06968484.1| ribonuclease BN [Ktedonobacter racemifer DSM 44963]
gi|297552159|gb|EFH86024.1| ribonuclease BN [Ktedonobacter racemifer DSM 44963]
Length = 360
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 105/263 (39%), Gaps = 11/263 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANL----AGFLGAHQFVPTVIDVVFG 68
+ F + + +++ ++ LL++FP +V +L GF+G +V +++
Sbjct: 18 KEFALKFKNDWAFNLSAALAYHLLLAIFPVLVALLSLLGLVFGFMGGDS-TKSVTNMMVS 76
Query: 69 AWPEVI-AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P V + + + L + L I+ ++A + L + Y V R
Sbjct: 77 ALPSVTNPQGVVQGVQSNLKASSGILGVIAVVSAILVGARLFALLETFFSIVYHVR-PRP 135
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+I+ +L + + +MS L + ++ LG+ + +L
Sbjct: 136 IVRRMVIAIAVFILFILLVPVMSLAASIPVLVASVLQA--TTLGHFAFLTTAAGFLGGVL 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ + +++ +P ++ G I + ++ + VLF Y+ F + +
Sbjct: 194 AAFLLFLAIYVIVPNLHIRLRHGWKGAIVSAVALQLYLVLFPLYVAHFLKGAV--GAVGF 251
Query: 248 IMTCLVFLYMLGVFFILGAELNA 270
LVF Y V LGAE+NA
Sbjct: 252 AAILLVFFYYFAVLLFLGAEVNA 274
>gi|313668998|ref|YP_004049282.1| ribonuclease BN [Neisseria lactamica ST-640]
gi|313006460|emb|CBN87923.1| putative ribonuclease BN [Neisseria lactamica 020-06]
Length = 406
Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 88/259 (33%), Gaps = 20/259 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
F EE A+ ++ + LL++ P + + + V
Sbjct: 23 VARRFSEERVPQAAASMTFTTLLALVPVLTVTVAAVSVFPVFESWSGAFVSFVKQTVVPQ 82
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A + D + A L I ++ S V + + NR +RV R W + L
Sbjct: 83 GADKVLDYL-DAFRRQAGSLTAIGSVMLFVTSLMLVRTIDQAFNRIWRVGAQRPWMMQFL 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + LL PL L G W R A L + L
Sbjct: 142 V--YWTLLTC------------GPLFLGVGISLTAGWGE----SWLLRPLAMPLGTVLLL 183
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ F+P L G T + LF Y+ +F Y ++Y A++ L+
Sbjct: 184 WGLYCFVPNRFVPARHALIGAAATALCLWCARALFVWYMGSFDGYRSIYGAFAAVPFFLL 243
Query: 254 FLYMLGVFFILGAELNASM 272
+L +L + GA L AS+
Sbjct: 244 WLNLLWTLVLGGAVLTASL 262
>gi|332884795|gb|EGK05051.1| hypothetical protein HMPREF9456_03204 [Dysgonomonas mossii DSM
22836]
Length = 439
Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 102/264 (38%), Gaps = 7/264 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + AI + E + AS ++ S LLS+ P + +A G V T +
Sbjct: 35 FYDIIKSFILAIRNIDGEQLFTRASALTYSTLLSIVPMLAVLFAIARGFGFQNIVKTQLF 94
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
F E++ K + + + Y N + + + N+ +++ +
Sbjct: 95 SYFAGQEEILNKATAFIDKSIEYAQGGIFLGVGVILLLYTVINLLSNIEDNFNKIWQIKK 154
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+++ +++A + L+ + + + + +G +
Sbjct: 155 GRTYFRMFTDYLALIIIAPIFLICNAGLNILLSTTAEQQYILGLVIGPFM-------KVV 207
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + +++++P K K S L G +FT I + V +L+ + S Y+ +Y
Sbjct: 208 PFLITILLFTILYIYIPNTKVKFTSALLGGVFTGICFQVFQMLYIGGQIWISKYNAIYGS 267
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + F + G +L
Sbjct: 268 FAALPLLLLWLQLTWFFVLFGVQL 291
>gi|313886527|ref|ZP_07820243.1| YihY family protein [Porphyromonas asaccharolytica PR426713P-I]
gi|312924073|gb|EFR34866.1| YihY family protein [Porphyromonas asaccharolytica PR426713P-I]
Length = 484
Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 98/270 (36%), Gaps = 9/270 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +Y AI+ ++++ AS ++ LS+ P + A G F T
Sbjct: 62 RRLYINTLKALYMAIKGYIDQRLSRHASALTYRTFLSIVPMLALLVAFAKGFG---FQDT 118
Query: 62 VIDVVFGAWP--EVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
+ D + P + + + L GL + + Y ++ + + N
Sbjct: 119 IYDFLMTYMPGHQNELDTMMGFVENYLGQVQGGLFLGVGLVLFLYTIFLLLDTIEQTFNV 178
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ V RS V+L + + + S + V + + + +
Sbjct: 179 IWGVPRGRSIGRKLTDYITMVVLLPILMTLSSGMTVMMATIKNTWFNDYIFFTPVWEFML 238
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
Y ++ +F G+ LP + K + L ++ + L+ I+ S Y
Sbjct: 239 KLFPYVILIFMFAGIFMA---LPNTRVKFLPALISGAIAGSAFQILQALYVSGILWISKY 295
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +Y G A+I L++L ++ + A+L
Sbjct: 296 NAIYGGFAAIPLLLLWLQVVWSITLFSAKL 325
>gi|320184927|gb|EFW59712.1| Ribonuclease BN [Shigella flexneri CDC 796-83]
Length = 250
Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 10/247 (4%)
Query: 35 ALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
+LLS+ P + L V + +F + I I Q +A K +
Sbjct: 3 SLLSLVPLVAVVFALFAAFPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNK-M 61
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
+ A + + ++ +LN +R R Y ++ + +
Sbjct: 62 TAVGACGLIVTALLLMYSIDSALNTIWRSKRARPKI--------YSFAVYWMILTLGPLL 113
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
LA++ +L +I N +L +I ++ +P + + G
Sbjct: 114 AGASLAISSYLLSLRWASDLNTVIDNVLRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVG 173
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + G F YI F +Y +Y LA I V++Y +LGAE+ ++
Sbjct: 174 AFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLG 233
Query: 274 IYYWRKK 280
Y K+
Sbjct: 234 EYRKLKQ 240
>gi|237744611|ref|ZP_04575092.1| ribonuclease BN [Fusobacterium sp. 7_1]
gi|229431840|gb|EEO42052.1| ribonuclease BN [Fusobacterium sp. 7_1]
Length = 396
Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 99/259 (38%), Gaps = 12/259 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 1 MLKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAP-L 59
Query: 71 PEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +TD +L + L + L + + S N + + + RS
Sbjct: 60 KGGTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIWHIKKSRSII 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + +I++ + + + + ++ + + + ++++
Sbjct: 120 RKISDYISFFIFLPLLFIILNGLVLFL----------LSKIKEIVFLYYIVKNIFPLISM 169
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + ++L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 170 TIFFMALYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNTVYGGFSVIF 229
Query: 250 TCLVFLYMLGVFFILGAEL 268
L+++ + ILG +
Sbjct: 230 IFLIWVRICWFIVILGVHI 248
>gi|293607559|ref|ZP_06689893.1| serum resistance protein [Achromobacter piechaudii ATCC 43553]
gi|292813992|gb|EFF73139.1| serum resistance protein [Achromobacter piechaudii ATCC 43553]
Length = 317
Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/265 (17%), Positives = 101/265 (38%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGA 69
++ D+ + + + ++L + S+ P ++ +AG F G + + +
Sbjct: 29 LLMDSANQWSSHRASSKGAALALYMVFSLAPMLILVIAVAGAFYGEDAVRSELFEQMRSL 88
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
E A+ I + + IS + ++ L+ SL+ + V +
Sbjct: 89 TGERGAEVIQTVLASAHESGGGWIAALISIFVLIFSATTAFAELKASLDDLWEVSANQKG 148
Query: 127 ---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+R++SFG VL+ ++ L++ V A+ A + A + W ++
Sbjct: 149 GIQGMVRSRMLSFGLVLVLALFLLVSLTVNAALGAAQKLYGDLWMASTFATVADWLSTLF 208
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + LP+AK ++PG I T ++VG Y+ + Y
Sbjct: 209 -SFSVVVALFAVIFKLLPSAKISWPDVIPGAIVTAALFLVGKWGIGLYLSR-GAAVSAYG 266
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
S++ L+++Y F GA
Sbjct: 267 AAGSLIALLLWIYYSAQIFFFGAVF 291
>gi|310778558|ref|YP_003966891.1| ribonuclease BN [Ilyobacter polytropus DSM 2926]
gi|309747881|gb|ADO82543.1| ribonuclease BN [Ilyobacter polytropus DSM 2926]
Length = 425
Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 91/267 (34%), Gaps = 10/267 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + ++ E++ + AS IS ALLS+ P + ++A LG + +
Sbjct: 26 KKKAASLVRMVVFTAENYKKTRSNLWASSISYYALLSIVPILAIAFSIAKGLGVEELIRN 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I + + K I + + L + + + + S N +
Sbjct: 86 EILKNSPLQEDALEKLILFSEKLMSSAKGGVLAGVGFVFLGWSVIKIFTLIEKSFNEIWG 145
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS + S+ L+ + ++ + F L II
Sbjct: 146 VKRQRSIIRK------FTDYFSIVLMFPMVLLLSNGVITTLQMHFISEGSPLFFIIH--- 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L L ++L +P K L + I + + + V Y+ +
Sbjct: 197 -WIPYLLLISFFTLLYLIIPNTKVNFSHALLAGLVVGILFQGLQLSMIKFQVILLNYNKV 255
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y + I +++ ++ + ILGA L
Sbjct: 256 YGSFSVIPIFMIWQKIVWIIIILGAHL 282
>gi|167743415|ref|ZP_02416189.1| putative ribonuclease [Burkholderia pseudomallei 14]
Length = 292
Score = 89.9 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 257 GSFAVLLMWLYFSAAVLLL 275
>gi|237736906|ref|ZP_04567387.1| ribonuclease BN [Fusobacterium mortiferum ATCC 9817]
gi|229420768|gb|EEO35815.1| ribonuclease BN [Fusobacterium mortiferum ATCC 9817]
Length = 414
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 88/262 (33%), Gaps = 12/262 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + A+E + + + + +LS+ P +L + G ++ +
Sbjct: 22 IISVSKKALESYKRANSGLWVTSLCFYTILSLVPIFAILFSLGTWFGVADYLLVKLREYS 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
E + L G+ I L + + + + N +RV + R
Sbjct: 82 P-LNEESINLLITFAQNFLENTRTGILAGIGFLFLGWTLISMFAIIEKAFNDIWRVEKSR 140
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +L +VI S + I +G LI+ +
Sbjct: 141 MLLRKITDYISFFILFPTLMVISSGIVKIIG----------NRIGMENLILTIFIKFVPF 190
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L +++ +P K + + L +F + + LF + Y+ +Y +
Sbjct: 191 LTLLFFFTIMYMLIPNTKVRFIPALISAMFIAMFFSGFQSLFLLLQDMVNAYNKIYGSFS 250
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
I L +L ++ F ILG+ L
Sbjct: 251 VIFIFLFWLKIMWFFIILGSHL 272
>gi|167820604|ref|ZP_02452284.1| putative ribonuclease [Burkholderia pseudomallei 91]
Length = 293
Score = 89.5 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 257 GSFAVLLMWLYFSAAVLLL 275
>gi|197121149|ref|YP_002133100.1| ribonuclease BN [Anaeromyxobacter sp. K]
gi|196170998|gb|ACG71971.1| ribonuclease BN [Anaeromyxobacter sp. K]
Length = 439
Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 89/259 (34%), Gaps = 14/259 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPTVIDVVFGAW 70
+ A+ E A ++ +L ++ P +V ++ F G V D +
Sbjct: 25 LRLALRVVEGETVRLRAMALTYISLFALVPALVVAFSVVQAFTGMDAISSRVHDFLIQNL 84
Query: 71 PEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
I + + + A + + + + ++N + + RS
Sbjct: 85 AVGARSSIEPYLDRFIRNAHATSAGVVGGALLVWSAVTLFTNVDHAVNDVWGIRRRRS-I 143
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +++ V L + + A AY + G L++ +G L
Sbjct: 144 TQQAVTYW------VGLTLGPLLLAASTTLGAYTQTLLANTGVRALVVLSG-----TLLN 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ +P + K+ + + G + ++W + + + Y +Y +A++
Sbjct: 193 CAFFATLYQIVPNTRVKLRAAVVGGVAAGVAWDLAKWGYAFVVARIFKYHAIYGSVAAVP 252
Query: 250 TCLVFLYMLGVFFILGAEL 268
L +L++ + GA L
Sbjct: 253 IFLFWLFVSWTIVLFGARL 271
>gi|297538920|ref|YP_003674689.1| ribonuclease BN [Methylotenera sp. 301]
gi|297258267|gb|ADI30112.1| ribonuclease BN [Methylotenera sp. 301]
Length = 307
Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 105/273 (38%), Gaps = 11/273 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPT 61
++ V I D+ ++ G + + ++ AL S+ P ++ + GF G
Sbjct: 2 KFLKAVVGIFIDSFSSWIIHRGASKGAALAFYALFSLAPILILTIAVTGFFFGDEAAQGQ 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAY 120
+I + A I + L T+ A+ +++ L+ SL+ +
Sbjct: 62 IIHQIENLVGHNGAVAIQAILAAARDPVGGQLTTVVAIGLLLIGATSVFTELKGSLDELW 121
Query: 121 RVVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
V + TRL+SFG VL+ + L+I V + + YV + G+ L
Sbjct: 122 GVPKSELSAMSILLRTRLLSFGLVLVLAFLLLISLVVSALLSVFEQYVGSLW---GSSAL 178
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + + + ++ LP + + G +FT + +G L YI
Sbjct: 179 LFTTLTSFVSFCVIACLFAVIYKMLPDERLSWQDVAIGSMFTACLFTLGKYLIGLYIGK- 237
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S ++ + S++ L+++Y LGAE
Sbjct: 238 SAVASSFGAAGSVIAILLWVYYSAQILFLGAEF 270
>gi|298373572|ref|ZP_06983561.1| ribonuclease BN [Bacteroidetes oral taxon 274 str. F0058]
gi|298274624|gb|EFI16176.1| ribonuclease BN [Bacteroidetes oral taxon 274 str. F0058]
Length = 449
Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 110/273 (40%), Gaps = 12/273 (4%)
Query: 1 MREYFCIVFDIIYDAI---EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ 57
+ + + F+++ I + FV+ + A ++ +S +L++ P + + G +
Sbjct: 37 LSKTKALTFNLLRKIILSIKGFVKSELMARSTSLSFRTVLALVPVLALIIAVGRGFGMSE 96
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISL 116
V VI+ E+I IT I L + I + + + + + +
Sbjct: 97 RVNEVIEDSLSGQSELIP-YITGFIDNYLEQMSGGVVIGIGVVFLLWTVISTFQEIEANF 155
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLL 175
N+ + V + RS++ ++L V + + S + + + + + + L NL +
Sbjct: 156 NKIWNVEKSRSFFHQFTTYIALIVLVPVLISLASGFSIYVNNRMNSVLGELYSPLNNLFM 215
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I ++ ++L +P K K + L I ++ + L+ + +
Sbjct: 216 RI------LPFFFYWLLFTLLYLVVPNTKVKFVHALFAGIICGTAFQLFQYLYINGQINL 269
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S Y+T+Y A+I +L + + + GAEL
Sbjct: 270 SRYNTVYGAFAAIPLFFFWLQISWLIVLYGAEL 302
>gi|254516307|ref|ZP_05128366.1| ribonuclease BN [gamma proteobacterium NOR5-3]
gi|219674730|gb|EED31097.1| ribonuclease BN [gamma proteobacterium NOR5-3]
Length = 479
Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 80/229 (34%), Gaps = 11/229 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + ++ + F +E+ ++ ++ + S+ P ++ AG + V
Sbjct: 16 NKQLEFFWTVLKQSAARFTQEEVLNRSAALAFYMMFSLPPMLLIMLWTAGSIHDEAAVNE 75
Query: 62 VI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRA 119
I + E A+ + + + T+ + + +S + ++ +LNR
Sbjct: 76 AICAEIGKLVGEDGARQLMTTVEGLRLEEPSWWATLIGVGTLVFSASTVLITMQDALNRI 135
Query: 120 YRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFV--AIPLALAYVRKFFPALGN 172
+ W + R +LA++ L++ + V I + ++ + +
Sbjct: 136 FGAPRTEGGKLGLWRMLRDHVLSGAMLATIGLILSVSLAVNALISALGRLLERWLGPVAS 195
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
LL + + + L+F +LP + G + T +
Sbjct: 196 WLLALDFVLVKLAGFTILFALLF--RYLPDVRIARKDTWFGALLTAGLF 242
>gi|332520404|ref|ZP_08396866.1| ribonuclease BN [Lacinutrix algicola 5H-3-7-4]
gi|332043757|gb|EGI79952.1| ribonuclease BN [Lacinutrix algicola 5H-3-7-4]
Length = 300
Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 49/287 (17%), Positives = 112/287 (39%), Gaps = 10/287 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
+ + ++ A + + + ++ ++ A+LS+ I+ N+ G + G
Sbjct: 6 KFKLIQLPKLLAKAGSSWFKGKPFERSAIVAYYAILSLPALIIIILNIVGGIWGRDIVQG 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRA 119
+++ + A A+ I I+Q + TI + + S GV L+ +L+
Sbjct: 66 ELLNEITKAIGPDTAESIRLMIVQKGSETTSVFATIVGVGTLIYGSTGVFFQLQSALDNI 125
Query: 120 YRVVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ + ++RL SFG++L+ L+ + + + P NLL
Sbjct: 126 WESESNFENSIVATIVSRLKSFGFILIIGFLLLTSFILTSLLSTFNKRLENILP--ENLL 183
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ ++ +++ + FLP+AK ++ G + T + +++G L Y
Sbjct: 184 DFLFIFDFLISIGFIYLLFAAMFKFLPSAKISWKTVKVGALLTTVLFLIGKYLLAIYFSE 243
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ Y SI+ ++++ + + GA Y KK
Sbjct: 244 M-EPGSTYGAAGSIILIMLWVSYSSLILLFGAHFTKIYSDEYVNKKD 289
>gi|83593957|ref|YP_427709.1| tRNA-processing RNAse BN [Rhodospirillum rubrum ATCC 11170]
gi|123526051|sp|Q2RR23|Y2625_RHORT RecName: Full=UPF0761 membrane protein Rru_A2625
gi|83576871|gb|ABC23422.1| tRNA-processing RNAse BN [Rhodospirillum rubrum ATCC 11170]
Length = 440
Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 102/269 (37%), Gaps = 11/269 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
+ + D +A+ ++ ++LL++ P I + G ++ + +
Sbjct: 40 VLRALITHDIPRLAASLAYTSLLALVPLIAIALAILAAFPGFGDERERMVAWIIETFVPY 99
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I D++ + A GL + + + + SLN +RV + R RL
Sbjct: 100 RRTEILDQVEHFVGA-AAGLTALGVAGLTLTAIILLLTIESSLNAIFRVEKSRHPL-ARL 157
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA--TMLALFI 191
+ + VL L+ +SF +Y+ +G ++ ++ L
Sbjct: 158 LVYWSVLTGGPLLMGLSFSLS------SYLVAIRHLVGTDVMSPFDALTPTLGPPLLSLT 211
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ +++ +P + L G + ++ + F I +Y T+Y LA++
Sbjct: 212 AMTLLYMLVPNRPVPLFHALAGALVATLASALLRSAFLMVITRGLSYETLYGALAALPAF 271
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
LV++Y+ ++GA A + + ++
Sbjct: 272 LVWMYLSWAVVLMGAVTAAEIPNWKMARR 300
>gi|167923558|ref|ZP_02510649.1| putative ribonuclease [Burkholderia pseudomallei BCC215]
Length = 289
Score = 89.5 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 138
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 139 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 194
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 195 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 253
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 254 GSFAVLLMWLYFSAAVLLL 272
>gi|167626858|ref|YP_001677358.1| tRNA processing ribonuclease BN [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|241667436|ref|ZP_04755014.1| tRNA processing ribonuclease BN [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875985|ref|ZP_05248695.1| tRNA processing ribonuclease BN [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|167596859|gb|ABZ86857.1| tRNA processing ribonuclease BN [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254842006|gb|EET20420.1| tRNA processing ribonuclease BN [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 398
Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 105/268 (39%), Gaps = 10/268 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVP 60
++Y I + + ++ +D +A+ I+L++L ++ P N+ A
Sbjct: 8 KKYLSIFKNYWIWVFKEYLRKDCPTVAAAITLTSLFAIVPAFFIIINILNAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +F A + I + + L S + ++ L I+LN+ +
Sbjct: 68 NLQNFLFQNMLPETAATVQQYITSI-SEKMTSLPITSVIVLLVVIFLMIKRLEITLNKVF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + R + L+ Y L ++ ++M FVF++ ++ + I
Sbjct: 127 YVNKQRPLVQSLLV---YWALMTMGPILMGFVFISSTYLISMA-----WFVKDIGIEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G + LP + + L I + + LF Y+ TYS
Sbjct: 179 LNGLSLIFLIAGFFVFYKILPNTRINSKTALIVAFLVAIVFSIAKKLFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L+ I ++++++ +LGA +
Sbjct: 239 IYGSLSLIPIFILWVFVAWQITLLGAVM 266
>gi|326329431|ref|ZP_08195755.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
gi|325952757|gb|EGD44773.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
Length = 378
Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 106/271 (39%), Gaps = 19/271 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F E+ G +A+ I+ A ++VFP ++ +++ GF+ G V+D +P
Sbjct: 17 VVYKFYEDQGNNLAAIITYYAFVAVFPILLLASSILGFVLEGNPGLQEAVLDTALAQFP- 75
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE--MRSWYI 130
I D++ + + G + LAA Y + +++ ++N A+ V + +
Sbjct: 76 ----IIGDQLGRKELTGSTGAIIVGGLAALYGALGLGLSMQNAVNTAWSVPRNSRPNPIL 131
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R+ S ++ + + AL+ V LG + I + +A+
Sbjct: 132 LRVRSLF--------MLAAGGLAILSVTALSLVLSHTDFLGFKAVDIGYWLVILGTVAIV 183
Query: 191 IGLI-FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASI 248
G++ V + LPG I + W V ++ + M A +
Sbjct: 184 TGMLCVVFRMATTRDHSLAHALPGAITFAMLWQVLQYFGAEFVQHVLAATRGMNQTFALV 243
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + FLY+ + ++ E+N + W +
Sbjct: 244 LGLVAFLYIAALMVVISIEVNVVYSRHLWPR 274
>gi|53803574|ref|YP_114581.1| ribonuclease BN [Methylococcus capsulatus str. Bath]
gi|53757335|gb|AAU91626.1| putative ribonuclease BN [Methylococcus capsulatus str. Bath]
Length = 430
Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 2/252 (0%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ E A + ++LLS+ P + ++ G H + ++ + E +
Sbjct: 31 REYREGGIRHRAMSLVYTSLLSLAPLLAVSFSVLKAFGVHNEIQPLLLEMLAPLGEKARE 90
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ I V + L + L Y + +E + S N +RV R Y R S
Sbjct: 91 VTDNVIGFVGNIQVGVLGFVGFLMLFYTVVSLLEQIEDSFNHIWRVSRTRPLY--RQFSD 148
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
++ +++ S + +A ++ + + AL + I + + F
Sbjct: 149 YLSIVLIGPVLLFSAIGIAASMSSMEIVRRLIALEPFGTAYYLAGIVLPYVLIVAAFAFA 208
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ F+P K L G +F +SW LF + V + YS +Y+G A I+ +++LY
Sbjct: 209 YSFIPNTAVKWRPALAGGLFAGLSWKATGFLFAEFTVNSAHYSAIYSGFAVILLSMIWLY 268
Query: 257 MLGVFFILGAEL 268
+ + +LG+ +
Sbjct: 269 LSWLILLLGSVV 280
>gi|320106965|ref|YP_004182555.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
gi|319925486|gb|ADV82561.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
Length = 331
Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/234 (18%), Positives = 90/234 (38%), Gaps = 2/234 (0%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
D A ++ + +LS+FPFIV L+ + + V + + + +
Sbjct: 71 DVHTYAFSVAANVILSLFPFIVLLLTLSRRVFHSAAMEGVAGEMMHYFLPTGQDFVMRNM 130
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
Q+LA P KG+ S + S+ L ++LN + V + R++ +++S G
Sbjct: 131 -QLLAHPQKGVQIFSVFMLLFSSTGVFLPLEVALNNVWHVKKNRNYLQNQIVSLGLAFAV 189
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ LAY+ ++ N +LA + ++ LP
Sbjct: 190 GALAMASIAFTAGQQTLLAYLFFGHTQNATYRVVSQNFMHLLAVLAGILLFFLIYWILPN 249
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
K M++LP I + W L+ H ++ + + +Y + +++ +
Sbjct: 250 RKVPAMAVLPTAIVIGLLWEACKELYIH-VLPWLDFQRVYGPFYISVGLMMWAF 302
>gi|78183942|ref|YP_376377.1| serum resistance locus BrkB-like [Synechococcus sp. CC9902]
gi|78168236|gb|ABB25333.1| serum resistance locus BrkB-like [Synechococcus sp. CC9902]
Length = 332
Score = 89.1 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 104/297 (35%), Gaps = 20/297 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
++ F ++ A + + + +++ + L S FP ++ ++A G +
Sbjct: 26 QKAFRWFVLSLWRASQRWSDAACVDLSAAFAYFTLQSFFPLLLIALSVAARVFGRTDSLD 85
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+I V P + + ++A G + +SN L+ +R +
Sbjct: 86 KLITFVAQILPPSAVDLVDSTLRGLVA-QGFGAGLFGVVVLIITASNAYLTLQRGADRLW 144
Query: 121 RVVEMRS------------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ + + R+ +F +L +V ++ L A++
Sbjct: 145 SEILPSASINSPLSTQIYQFVRARVEAFVIILAIAVLILADQIAAGFRWLPEAFIGNLDY 204
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVH------LFLPAAKSKIMSILPGVIFTWISWV 222
+ +L+L++ I + L L LP+ + IM ++PG I +
Sbjct: 205 YIPSLMLLVRESPIVSIGQILLPALALSLMALLLQRVLPSRRVPIMPLIPGSILIGLGLS 264
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +V+ Y + ++ ++++++GV G + + R+
Sbjct: 265 FLNAALSLSLVSLGNRFQAYGVIGGVLVLTLWVWLVGVILYFGQCWSVELAASRMRR 321
>gi|88703888|ref|ZP_01101603.1| conserved hypothetical protein, Ribonuclease BN-like family protein
[Congregibacter litoralis KT71]
gi|88701715|gb|EAQ98819.1| conserved hypothetical protein, Ribonuclease BN-like family protein
[Congregibacter litoralis KT71]
Length = 308
Score = 89.1 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 108/276 (39%), Gaps = 12/276 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ ++ DA E++++ + +A A ++ + S+ P ++ ++ G +
Sbjct: 5 LKVGLKRWTTVLRDAGEYWLDSNAFANAGALAFFTIFSMAPMMIMIVSVVGVFYGQETAQ 64
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAA-AYFSSNGVEALRISLNR 118
I A A +E + GLF T+S L A ++ ++ SLN
Sbjct: 65 GEIAAKIQAAVGSKAAEAVEEAIARARDQEDGLFATLSGLGAMLIGATTVFGQMQDSLNA 124
Query: 119 AYRVVEMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+ V S RL S VL +++ + V + + L ++++ P
Sbjct: 125 IFGVAPKPSRSGVWLLIRKRLTSLTIVLAVGFVMLVSLSLSVVLRVVLQSMQEWIPWHDA 184
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ G A LF +I LP K ++L G + T + VG VL Y+
Sbjct: 185 AFSALDTGLSLAVAALLFGTII---KTLPDVKLSWRNVLLGSLLTAAMFTVGRVLIALYL 241
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+T ++ Y S++ L+++ + + GA
Sbjct: 242 SVTAT-ASTYGAAGSLVLLLLWVNYSSLILLYGAAF 276
>gi|257386930|ref|YP_003176703.1| ribonuclease BN [Halomicrobium mukohataei DSM 12286]
gi|257169237|gb|ACV46996.1| ribonuclease BN [Halomicrobium mukohataei DSM 12286]
Length = 342
Score = 89.1 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 93/271 (34%), Gaps = 16/271 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ V + E MA I+ A +S+ PF++ L G + +
Sbjct: 2 SRYRNVGRFLRAVYTEVRAERITFMAGSIAYHAFISLLPFLLVLLLLVTEFGDPETASRL 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + + + +T+ + + + + L + + +L + + Y
Sbjct: 62 VAAIGTYFSPNESGLLTNVVEGARSETSLSIL--GVLTLLWGALKIFRSLDTAFSDIYET 119
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + G ++ +++ V + I + F LL
Sbjct: 120 GDE--------NTLGDTFADAIVVLVALVVGLLIVGLASTQLSFGDGPVGTLLS-----K 166
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ AL + + V P + ++PG + W LF +Y+ F+ S +
Sbjct: 167 VVAVAALTLVFLPVFYVFPDTDVTVREVVPGTVVAAGGWTALESLFRYYVA-FTGTSETF 225
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ +I+ + +LY G+ ++ A NA +
Sbjct: 226 GVVGTILLIVTWLYFNGLVLLVAAATNAVLA 256
>gi|255021122|ref|ZP_05293175.1| Ribonuclease BN [Acidithiobacillus caldus ATCC 51756]
gi|254969536|gb|EET27045.1| Ribonuclease BN [Acidithiobacillus caldus ATCC 51756]
Length = 293
Score = 88.7 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 100/261 (38%), Gaps = 11/261 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAW 70
A F +D AS ++ + LL + PF V +L +G + ++V ++
Sbjct: 35 FARAGHGFWLDDCIDRASLLAYTTLLGIVPFAVVVFSLWNLVGFDDSLRIQLNELVLRSF 94
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + + +I + LA L A + ++A+ LN + V W
Sbjct: 95 MPSVGETVLRQIDR-LAARGTQLGYFGVAGLAVTAILLIQAIERHLNAIWGVSPGSRW-- 151
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R++ + +L+ + S V L + G L +
Sbjct: 152 RRILRYLLILVFGPLGLAASLVL------LGPIGAMLQWFGPLPKALTGLTALVAFSVEA 205
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L V+L LPAA+ + G + G +L Y+ FST+ ++Y LA+
Sbjct: 206 GLLSLVYLSLPAARVTLRDAFLGGFAAALLLSSGKLLLGLYLR-FSTFESLYGALAAFPI 264
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++L++ + GAEL A+
Sbjct: 265 FLLWLFLAWCGVLFGAELAAA 285
>gi|226357037|ref|YP_002786777.1| ribonuclease BN [Deinococcus deserti VCD115]
gi|226319027|gb|ACO47023.1| putative ribonuclease BN; putative membrane protein [Deinococcus
deserti VCD115]
Length = 403
Score = 88.7 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 109/269 (40%), Gaps = 9/269 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI---- 63
+F +I ++ + F ++ +A+ I+ A+ SV P ++F +AG ++ V +
Sbjct: 6 LFTVIKESTQAFGQDKAPRLAAAIAYYAMFSVAPLLLFAVAIAGRFLTNEEVANQLFGPT 65
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYR 121
++ A + I Q A+ L + L ++ L+ +LN +
Sbjct: 66 GMLARELGADAANFLRSLIPQEDALHKGTLIASIVGFLTLFMGATGLFVQLQDALNSMWG 125
Query: 122 VVEMRS-WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWN 179
+ + + L V + ++ FVF+ + L+ + A G +++
Sbjct: 126 ADPGPPKGLMHMVRTRVISFLMIVLIGLLLFVFLGLNTYLSAIANDLGARFGAGTILVRL 185
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L L ++ FLP+ K + +L G T + +G ++ Y + S
Sbjct: 186 LTFGLSALFLTPVFAAIYKFLPSVKLEWHEVLVGGAITAALFTLGQIVIGLYFGRAAPGS 245
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +++ L+++Y G+ F GAE+
Sbjct: 246 A-FGAAGALVALLLWIYYSGMIFFFGAEV 273
>gi|189467583|ref|ZP_03016368.1| hypothetical protein BACINT_03973 [Bacteroides intestinalis DSM
17393]
gi|189435847|gb|EDV04832.1| hypothetical protein BACINT_03973 [Bacteroides intestinalis DSM
17393]
Length = 307
Score = 88.7 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 102/272 (37%), Gaps = 8/272 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++ I+ D + F+++ ++ ++ + L S+ PF+ + L
Sbjct: 10 KLSLSLLIKIVKDTGQGFIDDSVTRLSGSLAYATLFSIIPFLSLLVTIGVALHMDLANQL 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I + EVI + +S + + ++ ++ SLN +
Sbjct: 70 YIQLEPIVGAEVIGALRLIIEHAERTDSSASAAIVSLGISIFGATTIFAEIQSSLNSIWG 129
Query: 122 VVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ + + RL+SF +L+ + L+I + I +P + ++
Sbjct: 130 IKAVPKKSWLKYIQNRLLSFSIILVFAFVLLITFSITNIIGDLSNKFMASYPEVAGFIVK 189
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + LIF LP AK K + G + T + +VG + YI +
Sbjct: 190 VVGQVLNIGVTVIIFVLIF--KVLPDAKIKSKDVFIGAVVTTLLLLVGQWGISFYIG-IA 246
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T+Y A ++ + ++Y + GAE
Sbjct: 247 NVGTIYGAAAFMVVFITWIYYSAIIVYAGAEF 278
>gi|302555002|ref|ZP_07307344.1| LOW QUALITY PROTEIN: integral membrane protein [Streptomyces
viridochromogenes DSM 40736]
gi|302472620|gb|EFL35713.1| LOW QUALITY PROTEIN: integral membrane protein [Streptomyces
viridochromogenes DSM 40736]
Length = 241
Score = 88.7 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R TRL++F ++A + + + VA P A+ + + ++
Sbjct: 8 RGIVKTRLLAFLLFIVALLIGSVALPLMVAGPDAVVRIVPWS------TTVVQVLYWPVV 61
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L L ++ +S + +PG + WV+G+ L Y+ + T+Y L
Sbjct: 62 ILLSIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTSTVEGPTIYGSL 121
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A+ + L+++ + ++GA +NA++
Sbjct: 122 AAPVAVLLWIGVSAFAVLVGAAVNAAIDR 150
>gi|118594377|ref|ZP_01551724.1| hypothetical protein MB2181_01875 [Methylophilales bacterium
HTCC2181]
gi|118440155|gb|EAV46782.1| hypothetical protein MB2181_01875 [Methylophilales bacterium
HTCC2181]
Length = 407
Score = 88.7 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 100/265 (37%), Gaps = 9/265 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVF 67
+ I + + F + A + IS L + P ++ L+ +L + + +
Sbjct: 16 YFIFQEILSSFKRHNFLATNASISFFTLFAFIPLVLLILFFLSQWLSSSALALEKMQHIT 75
Query: 68 GAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
++ I E+ +V + A G I+ L S+ ALR S N +
Sbjct: 76 ALLLPEMSNRIMAEVGKVSSTKASWGALWITILF--LGSTPLTSALRSSFNNIFSAARKH 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++ V V L I + + + + A + + P + L +
Sbjct: 134 TYLKNKVRDLLAVTAIMVLLFIYTSINIYLVQASNFFTDYVPLIEKNFLT-----SLLSF 188
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L I + F K+ I G + T I W + F+++ Y + G+
Sbjct: 189 ILLVIVVSFFFKIFIPVKTYSQYIFYGALVTSICWFGLSNTFSYFTSISEYYGVFFGGMR 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
++ L++LY+ ++GAE+ A+
Sbjct: 249 NLFISLIWLYLNTAALLIGAEVIAA 273
>gi|55378716|ref|YP_136566.1| ribonuclease BN [Haloarcula marismortui ATCC 43049]
gi|55231441|gb|AAV46860.1| ribonuclease BN [Haloarcula marismortui ATCC 43049]
Length = 252
Score = 88.7 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 48/261 (18%), Positives = 101/261 (38%), Gaps = 17/261 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ ++ +E+ M + I+ A+ S+ P + G T+++++ E
Sbjct: 8 REIVQTARDENVPFMGASIAYYAIASIVPLLALLLAALSTFGG---TVTLLELLRTVLSE 64
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+T+ + A G T+S + + S +L ++ Y V
Sbjct: 65 NGQVILTELLENTRGHGATG--TLSLVLVVWSGSKVFRSLSVAFTEVYGEVTD------- 115
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
IS L+ S ++ + V A + + ++ N A AL +
Sbjct: 116 -ISLPAQLVRSAVVMGVLLGAVVFLSATSVALTYVKFQVPYPTLVGN---VAAFAALGVA 171
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ LP K+ + + PG +F W+ V F +Y T Y+ Y L +++ +
Sbjct: 172 FVPIYYVLPPVKTSLTHVAPGALFAAAGWITIQVGFFYYAGTAGRYAA-YGYLGALLLFV 230
Query: 253 VFLYMLGVFFILGAELNASMI 273
LY+ + +LG +NA++
Sbjct: 231 TALYLAAIVLLLGVVVNATLD 251
>gi|319941676|ref|ZP_08015999.1| hypothetical protein HMPREF9464_01218 [Sutterella wadsworthensis
3_1_45B]
gi|319804797|gb|EFW01659.1| hypothetical protein HMPREF9464_01218 [Sutterella wadsworthensis
3_1_45B]
Length = 378
Score = 88.7 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 100/271 (36%), Gaps = 8/271 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + ++ A+ E +AS ++L+ LLS+ P + +
Sbjct: 16 RQLLNTLRNLAGFAVARMREAQLQEVASSMTLTTLLSLVPLLAVSLAAFAAFPSFSETRA 75
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + + + + L+V + A GL A + ++ +++NR +R
Sbjct: 76 ALEEAVMSVLPLSYSEVIMKYLKVFSDHASGLGAFGLAGLALTALLMIDKFFVTVNRIFR 135
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V MRSW +I + + L + + + + A G L +I
Sbjct: 136 VRRMRSWAQRAMIYWALLTLGPIAIALSITLSTQAIRIAAGAAGTGGLPGWLFALIQ--- 192
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ IG + +P + L G ++ V F +YI T S++
Sbjct: 193 ----IILQTIGYAILFKLVPNCRVPFTHALTGGAAVALAGQVFREAFEYYITA-GTLSSI 247
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y + L++ Y+ + GA + A++
Sbjct: 248 YGAFVAFPVFLLWFYIAWMLVFAGAAITATL 278
>gi|116617613|ref|YP_817984.1| ribonuclease BN-like family protein [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096460|gb|ABJ61611.1| Ribonuclease BN-like family enzyme [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 286
Score = 88.7 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 104/265 (39%), Gaps = 9/265 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F + + ALL+VFP ++ A + F ++ ++ P+ I +
Sbjct: 25 FTRSQIGYVGPTFAYYALLTVFPILMGAALIVSFTSIS--TADLLAMMRNVLPKNIENIV 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ VL+ + L + S L + S + R S N V E + TR SF +
Sbjct: 83 IPIMESVLSSRSTSLLSFSVLFTIWSISRVIAVFRQSFNAIADVKEHINSLFTRAFSFIW 142
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+L ++ + + + L V + P + R + L +++ L+ ++
Sbjct: 143 LL----FILTLFALLMVGSNVLTIVIQHLPYSEWTNFLQHQTRWFIW-LGIWLALVMMNF 197
Query: 199 FLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
FLPA ++ +L G + + FT Y Y ++S++ L++L
Sbjct: 198 FLPAKDARAPFRFVLVGSFLELVMLNLLNRGFTFYAQFALGKYDFYQSVSSMIAMLIWLN 257
Query: 257 MLGVFFILGAELNASMIIYYWRKKP 281
++ +LG + + + WRK+
Sbjct: 258 LIATILVLGYVVIKWLSVINWRKED 282
>gi|167915718|ref|ZP_02502809.1| putative ribonuclease [Burkholderia pseudomallei 112]
Length = 287
Score = 88.7 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLGVFFIL 264
S L++LY +L
Sbjct: 257 GSFAVLLMWLYFSAAVLLL 275
>gi|25027253|ref|NP_737307.1| hypothetical protein CE0697 [Corynebacterium efficiens YS-314]
gi|259506610|ref|ZP_05749512.1| ribonuclease [Corynebacterium efficiens YS-314]
gi|23492534|dbj|BAC17507.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165808|gb|EEW50362.1| ribonuclease [Corynebacterium efficiens YS-314]
Length = 361
Score = 88.7 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 108/262 (41%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
FD I E F + G +++ I+ ++LSVFP + G + GF+ G + V D +
Sbjct: 38 FDHIMRMQERFSSKGGNQLSAGITYFSVLSVFPIAMLGFAILGFVLAGNPDLLTRVQDAI 97
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM- 125
GA+ + + + +A + I L A + + LR ++R + +
Sbjct: 98 AGAFDGEVGDTVNSVLESAIA-QRGAVLGIGGLTALWSGLGWMSNLRFGVSRMWSLDPTD 156
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL---LLIIWNGRI 182
++ + +L ++L + L I + L + LG++ +I W +
Sbjct: 157 GNFVLKKLNDLLGLILLLLALSIAFGITAIGASGLTTTLLEWVGLGDIPGISVITWAVAL 216
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
LA F+ ++ FLP K + S + G + +++ V L + + + + +
Sbjct: 217 LVGFLANFLVFFWLIKFLPRTKVPLKSAIQGALLGALAFEVVKQLASV-LASNALANPAG 275
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A I+ +V LY++ +
Sbjct: 276 ATFGPIIGIMVVLYLVWRILMY 297
>gi|225874668|ref|YP_002756127.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
gi|225794226|gb|ACO34316.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
Length = 305
Score = 88.7 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 4/249 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPTVIDVVF 67
+ + E+ + A ++ +A+LS+FPFIV ++ + V D+V
Sbjct: 23 WPHVKSLAEYLTRTEVHTYAFSVAANAILSLFPFIVMLFMMSRQVFHSQAMTAVVGDMVS 82
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + + +L P + S + SS+ L ++LN+ + V + RS
Sbjct: 83 YFLPANQEFVVRN--MALLVHPRGRVQVFSIVMLLISSSSVFLPLEVALNQVWGVKKSRS 140
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + ++IS G + + V+ A LA+V I
Sbjct: 141 YVVNQVISLGLAMAVGLLAVVSVAFTAAQNTVLAFVFFGHTHNFIFNGIAHFFLGITAAF 200
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
V+ LP K + +LP I T + W L+ + S Y A
Sbjct: 201 LSVSIFFLVYWVLPNRKLPVRVVLPTAIVTGLLWDGAKELYVMLLPWLDLRSA-YGPFAV 259
Query: 248 IMTCLVFLY 256
+T +++ +
Sbjct: 260 SVTLMMWAF 268
>gi|332828640|gb|EGK01336.1| hypothetical protein HMPREF9455_02364 [Dysgonomonas gadei ATCC
BAA-286]
Length = 440
Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 102/264 (38%), Gaps = 7/264 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + AI + + AS ++ S LLS+ P + +A G V + +
Sbjct: 35 FYNIIKSFILAIRNIDGAQLFTRASALTYSTLLSIVPLLAVLFAIARGFGFQNIVKSQLF 94
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
F E++ K + I + Y N + + + N+ ++V
Sbjct: 95 SYFAGQEELLNKATAFIDKSIEYAQGGVFLGIGVILLLYTVINLLSNIEDNFNKMWQVKT 154
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS++ +++A V L+ + + + + L L+I
Sbjct: 155 GRSYFRMFTDYLALIIIAPVFLICNAGITILLNSTAEQQYL-------LGLVISPMMKVI 207
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + +++++P K K S L G IFT I++ V +L+ + S Y+ +Y
Sbjct: 208 PFLITILLFTILYIYIPNTKVKFTSALFGGIFTGIAFQVFQMLYISGQIWISKYNAIYGS 267
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + F + G +L
Sbjct: 268 FAALPLLLLWLQLTWFFVLFGVQL 291
>gi|78187182|ref|YP_375225.1| ribonuclease BN [Chlorobium luteolum DSM 273]
gi|123582904|sp|Q3B399|Y1323_PELLD RecName: Full=UPF0761 membrane protein Plut_1323
gi|78167084|gb|ABB24182.1| tRNA-processing RNAse BN [Chlorobium luteolum DSM 273]
Length = 427
Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/255 (16%), Positives = 90/255 (35%), Gaps = 9/255 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEV 73
+++ + + A ++ LLS+ P + ++ P V D + +
Sbjct: 30 FLQNVRHDRIFLSAGSLAFQTLLSIVPLLAVVLSILNVFAVFAPLQPYVEDFIVHNFVPG 89
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + + AL + + + +LN + V R
Sbjct: 90 TGGMIREYFSGFIGNTFT-MPIFGALFLFIVALVLISTVDHTLNEIWEVHSPRKVLQ--- 145
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
G+ L +V L + + A ++V G LL + + L
Sbjct: 146 ---GFTLYWTV-LTLGPVLLATSLAASSFVWYTVFTEGPLLELKTRLLSLLPSTITVLAL 201
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ ++L +P + + + L G + + + V F Y+ +T+ +Y L+ I
Sbjct: 202 LLLYLLVPNRRVRFLHALSGALVATLLFEVSKRWFAFYVANVATFEHIYGALSVIPMLFF 261
Query: 254 FLYMLGVFFILGAEL 268
++Y+ V + GAE+
Sbjct: 262 WIYLGWVVVLTGAEI 276
>gi|332655162|ref|ZP_08420903.1| YihY family protein [Ruminococcaceae bacterium D16]
gi|332516022|gb|EGJ45631.1| YihY family protein [Ruminococcaceae bacterium D16]
Length = 292
Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 93/261 (35%), Gaps = 12/261 (4%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE---ILQVLA 87
+S +L++FP ++ G L V + P+ I D + +
Sbjct: 33 LSYFLILTLFPLLMCVNFFIGLLPLEP--EDVFFALEPLLPQESLTIILDYLTYVSSIPQ 90
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
+ L S +S + L +++ Y V S L +L +
Sbjct: 91 NQSTPLLLASLFTILLSASAALRTLFQTMDELYEVPRDNSIKRLVLSVVLSLLFLLTLYL 150
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLL------LIIWNGRIYATMLALFIGLIFVHLFLP 201
+ VF A R P + L+ R + + ++ V+
Sbjct: 151 SIIVVFTGDWFFQALERTLPPKILELIPLHMLASFWTQLRYVLLFCFVLLLVLAVYRLGT 210
Query: 202 AAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ +I + + ++ V +VLF+ +I S YS +Y LAS++ LV+LY G
Sbjct: 211 PRALHVKGTIRLTALLSALAMVACSVLFSWFIDMSSRYSLVYGSLASLIILLVWLYFCGN 270
Query: 261 FFILGAELNASMIIYYWRKKP 281
++GA + I WR P
Sbjct: 271 ILVIGAVVGQVWIRGRWRGDP 291
>gi|325279045|ref|YP_004251587.1| ribonuclease BN [Odoribacter splanchnicus DSM 20712]
gi|324310854|gb|ADY31407.1| ribonuclease BN [Odoribacter splanchnicus DSM 20712]
Length = 430
Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 102/259 (39%), Gaps = 2/259 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ +I+ F+++ AS ++ + LS P + +A GA + +
Sbjct: 40 VVIVSIDRFIKDASMISASALTFYSTLSFIPVVALILAIARGFGAAKAFEDWLKEQSYTN 99
Query: 71 PEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + + + + + L G+ + + + + +++NR + V + RS
Sbjct: 100 PD-VMQWVMNIANKALDNTQGGVIAGFGIVLLLWSVIRMLSSTELAMNRIWGVKKGRSLV 158
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +A + +V++S + V + L L + + +
Sbjct: 159 KKFTDYMSILFIAPILVVLISSMNVFMMANLQEYAMDEGLLSYASAALKAILTLIPYILV 218
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ +F+++F+P K L I + + + + + S+Y+ +Y GLA++
Sbjct: 219 WFLFVFLYMFMPTTPVKFKYALVAGIVAGTVFQIVQWFYLRFQIGVSSYNAIYGGLAALP 278
Query: 250 TCLVFLYMLGVFFILGAEL 268
LV+L + + G EL
Sbjct: 279 LLLVWLQLSWSIVLWGTEL 297
>gi|33151912|ref|NP_873265.1| ribonuclease BN [Haemophilus ducreyi 35000HP]
gi|33148133|gb|AAP95654.1| ribonuclease BN [Haemophilus ducreyi 35000HP]
Length = 275
Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 99/258 (38%), Gaps = 6/258 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ + + A +++ + +L++ P ++ ++ F ++
Sbjct: 13 FFKCWQQNRISISAGYLTYNTMLALVPLVMVVFSVFTFFPIFTEATELLKTFVYDNFAPN 72
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + +E +++ ++ + +S L + + ++ SLN + RS ++ L+
Sbjct: 73 AGNVVEEYVELFVSNSQKMGLVSMLGLFIVAVMLISSIDQSLNDIWHNTRKRSLLLSFLL 132
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
++ A + + I + + + LL YA L +++
Sbjct: 133 YILILIFAPLLAGASIAITTYIMSFEVFSENGIFSFSHYLLE------YAPFLLVWLLFT 186
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
V+ +P G +F + +G F Y+VTF +Y +Y LA + +V+
Sbjct: 187 LVYWIVPNTTVAFRHATIGALFAASFFTLGKQAFIWYVVTFPSYQAIYGTLAVLPIMIVW 246
Query: 255 LYMLGVFFILGAELNASM 272
+++ +LG + A +
Sbjct: 247 IHLSWQVVLLGGQFAAVL 264
>gi|220915850|ref|YP_002491154.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953704|gb|ACL64088.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-1]
Length = 439
Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 89/259 (34%), Gaps = 14/259 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPTVIDVVFGAW 70
+ A+ E A ++ +L ++ P +V ++ F G V D +
Sbjct: 25 LRLALRVVEGETVRLRAMALTYISLFALVPALVVAFSVVQAFTGMDAISSRVHDFLIQNL 84
Query: 71 PEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
I + + + A + + + + ++N + + RS
Sbjct: 85 AVGARSSIEPYLDRFIRNAHATSAGVVGGALLVWSAVTLFTNVDHAVNDVWGIRRRRS-I 143
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +++ V L + + A AY + G L++ +G L
Sbjct: 144 TQQAVTYW------VGLTLGPLLLAASTTLGAYTQTLLANTGVRALVMLSG-----TLLN 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ +P + K+ + + G + ++W V + + Y +Y +A++
Sbjct: 193 CAFFATLYQIVPNTRVKLRAAVVGGVAAGVAWDVAKWGYAFVVARIFKYHAIYGSVAAVP 252
Query: 250 TCLVFLYMLGVFFILGAEL 268
L +L++ + GA L
Sbjct: 253 IFLFWLFVSWTIVLFGARL 271
>gi|15837034|ref|NP_297722.1| BrkB protein [Xylella fastidiosa 9a5c]
gi|9105274|gb|AAF83242.1|AE003894_7 BrkB protein [Xylella fastidiosa 9a5c]
Length = 269
Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 99/278 (35%), Gaps = 29/278 (10%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F E D A+ +S ALLS+ P +V L L T+I +
Sbjct: 3 LVNRFTEIDLLTQAASLSFYALLSLAPLLVLLLWLTASL-YPAAQATLITQIEQLAGNSA 61
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYF-------SSNGVEALRISLNRAYRVVEMR- 126
A + A P T LA + ++ L+ LN + + R
Sbjct: 62 ATVAKTILQNATAQP-----TFGTLAGLWSTLLLFVGATAVFAQLQNVLNLIFHTDQRRL 116
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+W R+ SFG VL L+I A+ +A ++ P +G L ++
Sbjct: 117 EGIKAWLKKRVFSFGVVLALGFLLIISMVATTALQVAFTHLPSMLPTIGYLSTLLLYT-- 174
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ F++ +LP G T + +G YI T + S Y
Sbjct: 175 --------LAFAFLYRYLPDRTVNWRQAYIGGAITACLFTLGRYAIGLYISTAAPGSA-Y 225
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++ LV++Y V F +GA L A + K
Sbjct: 226 GSMGALVIMLVWMYYTSVVFFIGALLTAVIDERLRDHK 263
>gi|257469271|ref|ZP_05633365.1| ribonuclease BN [Fusobacterium ulcerans ATCC 49185]
gi|317063518|ref|ZP_07928003.1| ribonuclease BN [Fusobacterium ulcerans ATCC 49185]
gi|313689194|gb|EFS26029.1| ribonuclease BN [Fusobacterium ulcerans ATCC 49185]
Length = 419
Score = 88.4 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/258 (18%), Positives = 95/258 (36%), Gaps = 12/258 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I A+E++ + + + LLS+ P +L +LG + + +
Sbjct: 27 IQRALENYKRANSALWVTSLCFYTLLSLVPVFAILFSLGSWLGVAESIIIHLSKYSP-LN 85
Query: 72 EVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
E + + +L G+ I L+ + + S N ++V + R
Sbjct: 86 EEMITFLVQFSENLLENARSGVLAGIGFLSLGWTLITMFSIVEKSFNDIWQVEKSRMILR 145
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ LL + ++ ++ V I L + P L L++F
Sbjct: 146 KITDYIAFFLLFPLLILTINGGMVIIGKKLEGIYDISPYL----------LQVIPSLSIF 195
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ +++ +P K K++ +FT + + F H V TY+ +Y + I
Sbjct: 196 LFFTALYMLIPNTKVKLIPAFFSAVFTSVLFSGLQYFFIHLQVMIITYNKIYGSFSVIFI 255
Query: 251 CLVFLYMLGVFFILGAEL 268
++L ++ F ILGA L
Sbjct: 256 FFLWLKIMWFFIILGAHL 273
>gi|294056392|ref|YP_003550050.1| ribonuclease BN [Coraliomargarita akajimensis DSM 45221]
gi|293615725|gb|ADE55880.1| ribonuclease BN [Coraliomargarita akajimensis DSM 45221]
Length = 493
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/291 (16%), Positives = 104/291 (35%), Gaps = 20/291 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R + I+ + A+ ++ +++ + P I F L+GF+
Sbjct: 46 IRARVYHLLRILTLTWQGLRRNMIPVQAAALTFYSMIGIGPLIAFAIMLSGFVIQKGNEE 105
Query: 61 TVIDVVFGAW-------------PEVIAKPITDEILQVLAV-----PAKGLFTISALAAA 102
+I+ + A PE + +IL+++ + + I AL A
Sbjct: 106 LIIEGIAKAIAFAAPQIALDTDGPENGITELNPQILELITSFSQAAQSGTVGAIGALMLA 165
Query: 103 YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY 162
+ + ++ S N + V + R R++ + + L + AY
Sbjct: 166 FIGLQVLSSIESSFNSLWGVEQGRR-VSERIVVYWTFVSLGAVLGSAALTMDMAAATRAY 224
Query: 163 VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
+ + P GNL +I + L L + L F P + G +
Sbjct: 225 LGE-LPLGGNLANLILLISPLLSYLLLVVLLAVFFRFFPNTTVEWKPAFIGAGMVVLLLH 283
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
V +L Y+ +++Y + I+ ++ LY+ + +LG ++ ++
Sbjct: 284 VYKLLSFLYVRRVVDTNSLYGSVGIIIVLMLGLYVFWLLILLGGQVTYALQ 334
>gi|82703272|ref|YP_412838.1| ribonuclease BN, putative [Nitrosospira multiformis ATCC 25196]
gi|82411337|gb|ABB75446.1| ribonuclease BN, putative [Nitrosospira multiformis ATCC 25196]
Length = 321
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 103/276 (37%), Gaps = 15/276 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTV 62
++ ++ + +V++ +M + ++ L S+ P ++ + AG G +
Sbjct: 2 NIREIWTLVKASFSSWVDDYAPSMGAALAYYTLFSIAPLLLIVISTAGLIFGEEAVRGEI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYR 121
+ + A + + V + + ++ L+ + +R +R
Sbjct: 62 FGQLRDLMGDQGAAAVEGLLASVSKPEEGAAGAVVGTVLLLVGATTVFGELQNAFDRIWR 121
Query: 122 VVEM---------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
TRL+SFG +L +++ A+ + FF L
Sbjct: 122 APVKDKNDKNGGIWELIRTRLLSFGIILGIGFLMMVSLVFNAAVSALGKWWGGFFSGLE- 180
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+++ + + + ++ F+P K + + G + T + + +G +L YI
Sbjct: 181 --VLVTSLNFIFSFVFTTAVFAMLYKFMPKVKIQWRDVGAGAVVTALLFTIGKILIGLYI 238
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S S+ + S++ LV++Y F+LGAE
Sbjct: 239 GK-SAISSGFGAAGSLVVVLVWVYYSAQIFLLGAEF 273
>gi|322368510|ref|ZP_08043078.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
gi|320551794|gb|EFW93440.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
Length = 347
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/255 (18%), Positives = 96/255 (37%), Gaps = 19/255 (7%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
EE+ MA I+ + +S+ P ++ + +G+ +I + P + +
Sbjct: 3 EENIKFMAGSIAYHSFVSLLPVLLLLTLIVSAVGSETLARRLIQDIGSYLPASANIFLQN 62
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY--ITRLISFGY 138
I P+ G + L + + AL + Y V S+ + +
Sbjct: 63 AIS---GAPSPGDSLVVVLVLLWGTFRIFRALDAAFADIYDVERKTSFRDELEDGVVVLV 119
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
L+ V + ++ ++ P L + ++L L I + ++
Sbjct: 120 ALVLVVVTIGVTSATISTPQRLPFDEYLAEG--------------VSILVLGIAFLPMYY 165
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
P +I ILPGV + W V +F Y + +++Y + I+ +V+LY+
Sbjct: 166 VFPNIDVEIGEILPGVAIAAVGWQVLHSVFHMYAQVSAYNTSLYGTVGKILLVIVWLYVG 225
Query: 259 GVFFILGAELNASMI 273
+ + GA +NA +
Sbjct: 226 SIVILFGAAVNAVLA 240
>gi|325267035|ref|ZP_08133705.1| ribonuclease II [Kingella denitrificans ATCC 33394]
gi|324981535|gb|EGC17177.1| ribonuclease II [Kingella denitrificans ATCC 33394]
Length = 400
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 89/246 (36%), Gaps = 13/246 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV-IDVVF 67
+ + F E + A ++ + LL++ P + + + +D+V
Sbjct: 22 CRFLRFVSQRFNEANILQTAGSLTFTTLLALVPLLTVILIVLAAFPMFGDISAHFMDLVH 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A I D + + A + + S ++ + +LNR +RV R
Sbjct: 82 RIIVPSGASAIADYLDR-FKEQAVRMTALGIAVMVVTSLLLIQTIDQTLNRIWRVQRGRP 140
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W+I+ ++ + LL L++ + V+ FF + + + + L
Sbjct: 141 WWIS--LTVYWALLTIGPLLVGISLSVSAYGLAQNTDYFFSSSLHFVGNV---------L 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ L ++ +P ++ + G + + F YI F++Y+ +Y +
Sbjct: 190 GNAVFLFLLYRLVPNCHVPLLHAVSGALIIGLLLETAKYGFGIYISHFNSYAPVYGAFSI 249
Query: 248 IMTCLV 253
I LV
Sbjct: 250 IPIFLV 255
>gi|301308861|ref|ZP_07214813.1| YihY family protein [Bacteroides sp. 20_3]
gi|300833385|gb|EFK64003.1| YihY family protein [Bacteroides sp. 20_3]
Length = 456
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 106/271 (39%), Gaps = 9/271 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E + + + A+ F E+ AS ++ S LLS+ P + +A G F
Sbjct: 43 LKEIYINIIKTVILAVRGFQSENLQTKASALTYSTLLSIVPLLAVLLGIAKGFG---FQG 99
Query: 61 TVIDVVFGAWPEVIAKP--ITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLN 117
TV +F +P + + + LA G + + + Y N + ++ + N
Sbjct: 100 TVRQELFDYFPGHEMELNKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLISSVEDTFN 159
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+++ + R WY L+ V + S + + + + L+ +
Sbjct: 160 DIWQIQKSRPWYRKISDYLALFLVLPVLMTASSGLSIFMSTLQNSFLGQYLFFTPLMELF 219
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ A + + +++ LP K + ++ L ++ + ++ + S
Sbjct: 220 LHI---APYIITTLAFTGLYVSLPNTKVRFVNGLVAGFIAGCAFQLFQFIYISGQIWVSK 276
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ +Y A++ L++L + + + GAEL
Sbjct: 277 YNAIYGSFAALPLLLLWLQLSWLICLFGAEL 307
>gi|209520668|ref|ZP_03269420.1| ribonuclease BN [Burkholderia sp. H160]
gi|209498906|gb|EDZ99009.1| ribonuclease BN [Burkholderia sp. H160]
Length = 300
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 100/262 (38%), Gaps = 4/262 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ ++ F G +A ++ ALLS+ P ++ + + Q V + +
Sbjct: 18 RFLLQTLKAFRANQGLLLAGAVAYYALLSIVPLLILIVIVLSRVVPQQLVLDALAHLLRW 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR---VVEMR 126
+ + E+ L + + L +FSS L +++ + VV+ R
Sbjct: 78 LVPGQSAALVRELSNFL-QHRTAISWVLLLTMIFFSSLAFTVLENAMSLIFVHRVVVKRR 136
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ I+ L+ + Y+L V L+I++ V A+ A + F +L +
Sbjct: 137 HFLISALLPYCYILFLGVGLLIVTIVSSALEAIGAEGLQLFGLHVSLQGFTRVVLYLFGL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L V+L +P + I L G + + W + + Y T S S +Y L
Sbjct: 197 VGEIFVLTSVYLVMPVGRPSIRHALIGGVVAGVLWEITRHVLVWYFATLSHVSVVYGSLT 256
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
+ L+ L + GA++
Sbjct: 257 MAVVILLSFEWLATLLLFGAQV 278
>gi|300779712|ref|ZP_07089568.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300533822|gb|EFK54881.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 360
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 93/259 (35%), Gaps = 9/259 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
E F G A+ I+ ++LS+FP + GF + + + + +
Sbjct: 44 MRMNERFGANGGNQFAAGITYFSVLSLFPLAMLLFAGLGFFLAARPDLLDQITEQISNSV 103
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEMRSW 128
+ I + + + I L + + LR ++ + E ++
Sbjct: 104 EGETGEMINSVVESAID-QRGAVAGIGLLTTLWSGLGWMNHLRSGISAMWNLDANEGGNF 162
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL---LLIIWNGRIYAT 185
+ + ++ V ++ V + +G+ ++W +
Sbjct: 163 VVKKFWDLIALIGLLVLFIVAFAVTAIGASSFTSTLMERLGIGDFPGARFLVWLVGLAVG 222
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+LA F+ ++ +F+P K + + L G + I + + F+ ++ +T + A
Sbjct: 223 ILANFLVFWWMIVFMPRTKVPMRAGLKGALIGAIIFELLKQ-FSTVVIGSATGNPAGAIF 281
Query: 246 ASIMTCLVFLYMLGVFFIL 264
I++ +V LY++ +
Sbjct: 282 GPIISLMVVLYLVWRIVLY 300
>gi|269128397|ref|YP_003301767.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
gi|268313355|gb|ACY99729.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
Length = 341
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 109/268 (40%), Gaps = 11/268 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D + A E + ++ G + + I+ A LS FP + G L G+L + Q ++ +
Sbjct: 34 DHMARAAERYRDKRGNRLGAAIAFYAFLSFFPLVAIGYALLGYLVGASEQAREYLVQAIN 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEM 125
P + + +I Q A A GL ++ L Y + ALR +L +
Sbjct: 94 ELLPGLAGEIEVAQIAQ--AWGAVGLLGVAGL--IYTGLGCMNALREALRDIWLGDPTGG 149
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
++ + +L G +L V L+ A V ++ ++ + + +
Sbjct: 150 GNFLLKKLHDIGALLFLGVVLITSVAGSTVTGQASHAVLQWLGLEHAVVAGLLLRLLTLS 209
Query: 186 MLALFIGLIFVHLF--LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ LIF+ LF L ++ SI G +F + + + + + + + +YA
Sbjct: 210 VTIGCNTLIFLMLFSRLSGTRAPWRSIAGGALFGAVGFEILKQVGALLVARTAG-NPVYA 268
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
A + LV++Y++ F + A +A+
Sbjct: 269 SFAVVAGLLVWIYLVARFVVFAAAWSAT 296
>gi|86157125|ref|YP_463910.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773636|gb|ABC80473.1| tRNA-processing RNAse BN [Anaeromyxobacter dehalogenans 2CP-C]
Length = 429
Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 86/259 (33%), Gaps = 14/259 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPTVIDVVFGAW 70
+ A+ E A ++ +L ++ P +V ++ F G V D +
Sbjct: 15 LRLALRVVEGETVRLRAMALTYISLFALVPALVVAFSVVQAFTGMDAISSRVHDFLIQNL 74
Query: 71 PEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
I + + + A + + + + ++N + + RS
Sbjct: 75 AVGARSSIEPYLDRFIRNAHATSAGVVGGALLVWSAVTLFTNVDHAVNDVWGIRRRRSV- 133
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ V L + + A AY + G L++ +G L
Sbjct: 134 ------TQQAVTYWVGLTLGPILLAASTTLGAYTQTLLANTGVRALVVLSG-----TLLN 182
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ +P + K+ + + G + ++W V + + Y +Y +A++
Sbjct: 183 CAFFATLYQIVPNTRVKLRAAVVGGVAAGVAWDVAKWGYAFVVARIFKYHAIYGSVAAVP 242
Query: 250 TCLVFLYMLGVFFILGAEL 268
L +L++ + GA L
Sbjct: 243 IFLFWLFVSWTIVLFGARL 261
>gi|160933187|ref|ZP_02080576.1| hypothetical protein CLOLEP_02032 [Clostridium leptum DSM 753]
gi|156868261|gb|EDO61633.1| hypothetical protein CLOLEP_02032 [Clostridium leptum DSM 753]
Length = 145
Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 61/136 (44%)
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ + + + L ++ + P + + R LF+ L+ ++ +P
Sbjct: 1 MIVFVALGLMTFGKNLLTWLSGWIPIDMGSISLWNLLRFVILAAVLFMVLLTLYYLVPNR 60
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ ++PG + +SW+V ++ F Y+ YS +Y + + + L++LY + I
Sbjct: 61 LYTVRQVMPGTFASLLSWLVFSIGFAFYVENMGRYSVVYGSIGAAIVLLLWLYFSAITLI 120
Query: 264 LGAELNASMIIYYWRK 279
+GAELN ++ +K
Sbjct: 121 MGAELNYLLVNRPSKK 136
>gi|150007019|ref|YP_001301762.1| ribonuclease BN [Parabacteroides distasonis ATCC 8503]
gi|255015944|ref|ZP_05288070.1| ribonuclease BN [Bacteroides sp. 2_1_7]
gi|256841906|ref|ZP_05547411.1| ribonuclease BN [Parabacteroides sp. D13]
gi|298377445|ref|ZP_06987398.1| YihY family protein [Bacteroides sp. 3_1_19]
gi|149935443|gb|ABR42140.1| ribonuclease BN [Parabacteroides distasonis ATCC 8503]
gi|256736222|gb|EEU49551.1| ribonuclease BN [Parabacteroides sp. D13]
gi|298265859|gb|EFI07519.1| YihY family protein [Bacteroides sp. 3_1_19]
Length = 456
Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 106/271 (39%), Gaps = 9/271 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E + + + A+ F E+ AS ++ S LLS+ P + +A G F
Sbjct: 43 LKEIYINIIKTVILAVRGFQSENLQTKASALTYSTLLSIVPLLAVLLGIAKGFG---FQG 99
Query: 61 TVIDVVFGAWPEVIAKP--ITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLN 117
TV +F +P + + + LA G + + + Y N + ++ + N
Sbjct: 100 TVRQELFDYFPGHEMELNKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLISSVEDTFN 159
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+++ + R WY L+ V + S + + + + L+ +
Sbjct: 160 DIWQIQKSRPWYRKISDYLALFLVLPVLMTASSGLSIFMSTLQNSFLGQYLFFTPLVELF 219
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ A + + +++ LP K + ++ L ++ + ++ + S
Sbjct: 220 LHI---APYIITTLAFTGLYVSLPNTKVRFVNGLVAGFIAGCAFQLFQFIYISGQIWVSK 276
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ +Y A++ L++L + + + GAEL
Sbjct: 277 YNAIYGSFAALPLLLLWLQLSWLICLFGAEL 307
>gi|55379396|ref|YP_137246.1| ribonuclease BN [Haloarcula marismortui ATCC 43049]
gi|55232121|gb|AAV47540.1| ribonuclease BN [Haloarcula marismortui ATCC 43049]
Length = 379
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/220 (13%), Positives = 66/220 (30%), Gaps = 18/220 (8%)
Query: 54 GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
G F ++ + + D + G + + + L
Sbjct: 20 GGEAFAERIVTAAGDVLTPAASTLLEDALTS--GAGRGGATVLGVGVTLWSALKVFRGLD 77
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ +R Y S + + + LV + + + V AL
Sbjct: 78 TAFSRVYGTDGPDSIVREIVDGLAALGGIGIALVGLGIIGAFGTVLGVQVALGGLALVP- 136
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L + + ++ P + + +PG +F W + F Y
Sbjct: 137 --------------VLAVAFLPLYYLFPDQEMTLREAVPGAVFAGGGWTLLGTGFNVYAA 182
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y +Y + ++ + + Y G ++GA +NA++
Sbjct: 183 QADSY-QVYGVIGGVLLLVTWFYFAGQVLLVGAAVNAALA 221
>gi|254446822|ref|ZP_05060297.1| Ribonuclease BN-like family [Verrucomicrobiae bacterium DG1235]
gi|198256247|gb|EDY80556.1| Ribonuclease BN-like family [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/291 (16%), Positives = 98/291 (33%), Gaps = 24/291 (8%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVV 66
+I E +A A+ +S S+LL + P I ++GF +I+ V
Sbjct: 39 RVIAITFSGLKENRIFARAAALSFSSLLGLGPLIALMVLVSGFALDQADPDLAQNMIERV 98
Query: 67 FGAWPEVI-----------AKPITDEILQVLAVPAKGLFTISA-LAAAYFSSNGVEALRI 114
+ + + I + G + L +
Sbjct: 99 VTYIAPQVNLSETDESEQEGGGLREMISHFIEASQSGTVGVGGALVLVLIVLQLFITIED 158
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPALG 171
+ N + V + R ITR+I + ++ LV F + L +V G
Sbjct: 159 AFNDIWGVSKGRK-LITRVILYWTIITLGTVLVFAGVAFAVSELMKLNEQFVALTESIPG 217
Query: 172 NLLLIIWNGRI---YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
+ + W + L + L + F+P + + + G +F+ +S + F
Sbjct: 218 SETVNSWLATYGGKLGSFLLITSVLALFYRFIPNTQVEWRAAYVGALFS-VSCFIANNAF 276
Query: 229 TH-YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y + T+Y L + ++ L+ + +LG L+ ++ ++
Sbjct: 277 AFLYFERVAMQRTLYGSLGILPVLMIGLFTFWLCLLLGGRLSFAVQNARFK 327
>gi|319787952|ref|YP_004147427.1| ribonuclease BN [Pseudoxanthomonas suwonensis 11-1]
gi|317466464|gb|ADV28196.1| ribonuclease BN [Pseudoxanthomonas suwonensis 11-1]
Length = 423
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/265 (16%), Positives = 98/265 (36%), Gaps = 8/265 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
FV++ + A+ ++ + ++ P +V LA F Q+ ++D VF +
Sbjct: 27 LWHRFVDDRLFQAAAALAYTTAFALVPLAVVVLGVLAAFPVFDQWSNALVDYVFSNFVPS 86
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ I + ++ + L +A + ++ + NR +RV R L
Sbjct: 87 AARAIESSLDRLAENSRQ-LTAAGVVALVVSLLVTLNSVESTFNRIWRVASARPRLSRYL 145
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ +V + ++ ++ A I A +L +
Sbjct: 146 ------VYWTVLTLGALLAAASLSISARIFALPLFATPEGRAIAHLSLSLAPVLIELAVV 199
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
V+ +P K L G + + Y+ +F Y +Y LA + ++
Sbjct: 200 ALVYKVVPHHTVKWRHALAGAVLAVLVLETVKAGLGVYLGSFQGYQKLYGALAFVPILML 259
Query: 254 FLYMLGVFFILGAELNASMIIYYWR 278
++Y+ + +LGA L +S+ + ++
Sbjct: 260 WIYLGWIAILLGASLASSLAAFRYQ 284
>gi|57340138|gb|AAW50056.1| hypothetical protein FTT0213 [synthetic construct]
Length = 430
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 105/267 (39%), Gaps = 11/267 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ +
Sbjct: 34 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFS--SLSES 91
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 92 LQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIFY 150
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + L+ Y L ++ ++M FVF++ ++ + +
Sbjct: 151 ANRQRPILQSLLV---YWALMTMGPLLMGFVFISSTYLISMA-----WFVKDIGMEQYLL 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++ L G V+ LP + L I + + +F Y+ TYS +
Sbjct: 203 SGLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSVI 262
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y L+ I ++++++ +LGA +
Sbjct: 263 YGSLSLIPIFILWVFVTWQITLLGAVM 289
>gi|221069523|ref|ZP_03545628.1| ribonuclease BN [Comamonas testosteroni KF-1]
gi|220714546|gb|EED69914.1| ribonuclease BN [Comamonas testosteroni KF-1]
Length = 326
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 107/268 (39%), Gaps = 17/268 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAW 70
+ D+++ +++ DG M++ +S +LS+ P ++ L G+ +V T+I +
Sbjct: 22 LIDSVQLWLQADGLRMSAAMSFYGMLSLAPLLLAVVGLLGWWLDRSYVESTLISQIQSVV 81
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAY------RVV 123
E A+ + + L ++ L + GV L+ SL++ + R
Sbjct: 82 GERAAQVVKSALASAQNANQGSLASVLGLVMMLSGATGVFVELQASLDKLWSMGEESRPQ 141
Query: 124 EMRSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIW 178
E + W+ I+RL YV+ L++ + AI + + LG L+ +I
Sbjct: 142 ENKPWWSMAISRLWGLSYVVGLGFLLLVSMVLSTAIQMITKWANDELQLVPLGPLMGLIN 201
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G + + LF GL+ K +L G + + +G Y+ T +
Sbjct: 202 EGLSFGIAVLLFWGLM---RMGAGIKPSTRYLLLGSLTGAALFTIGKQALAWYLST-AAV 257
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGA 266
+ Y S++ L++ Y + A
Sbjct: 258 VSAYGAAGSLVVVLMWFYFTSAILLFSA 285
>gi|241766670|ref|ZP_04764514.1| ribonuclease BN [Acidovorax delafieldii 2AN]
gi|241363008|gb|EER58679.1| ribonuclease BN [Acidovorax delafieldii 2AN]
Length = 344
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 104/265 (39%), Gaps = 16/265 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAW 70
+ + + + DG+ M++ +S +LS+ P +V + G +L ++ +
Sbjct: 65 LRRVVWLWADADGFRMSAAMSFYGMLSLAPLLVLLVAVLGWWLDRDSLQQGIVAQIGTIV 124
Query: 71 PEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAY----RVVE 124
A I + P +GL T+ L + ++ L+ +L R + V
Sbjct: 125 GAQGAAVIRQTLRS-AQAPEQGLLASTLGFLVLLFGATGVFGELQSALQRLWTHGRGEVP 183
Query: 125 MRSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ W+ RL YVL L++ V + L + ++ P + LL ++
Sbjct: 184 PQPWWHSVSLRLRGVAYVLAFGFLLLVSLVVTTLLNLFAGWAGRWLP-MAPLLRLLNEAT 242
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+A ALF+GL+ K ++ + G + + G + Y+ T + +
Sbjct: 243 AFAVCAALFVGLM---RMSAGPKPRLRFLWLGAVIGASLFTAGRHVLAVYLST-AAVVSA 298
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
Y S++ L+++Y ++ A
Sbjct: 299 YGAAGSLVVLLMWIYFSAAVLLVSA 323
>gi|323342957|ref|ZP_08083188.1| hypothetical protein HMPREF0357_11369 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463021|gb|EFY08216.1| hypothetical protein HMPREF0357_11369 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 299
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/275 (15%), Positives = 97/275 (35%), Gaps = 42/275 (15%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+++ I +E +G ++ S ++ + PFI+ G V
Sbjct: 1 MKKFIKK----IQTVMEMMSSNEGTLFTYALAYSIIVGIAPFIIISVVFVGTYVYD--VS 54
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL------RI 114
+I ++ P + P D I Q + L + + +S + + +
Sbjct: 55 QIIQLLQRYVPADLILPFVDYI-QTSDLSNLWLIVSLLGVSIWVASKSIYSFLLLSSEQD 113
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+N + + R+++ Y ++ + ++ + +P +
Sbjct: 114 GVNI--------NHFFLRILACVYFIMIVLGIMAFGILIGYVPFINKF------------ 153
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
T + + +F + L ++ ++ G T I ++ LF YI
Sbjct: 154 ---------TTPIVITFFFVFFYRLLSFKYTRFRDVIWGSAITSIVLILLGRLFFVYINQ 204
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+S Y T+Y LAS+M L+ +++ G +N
Sbjct: 205 YSNYQTIYGPLASMMILLISGWIIAWVVFFGYCIN 239
>gi|116073876|ref|ZP_01471138.1| hypothetical protein RS9916_35537 [Synechococcus sp. RS9916]
gi|116069181|gb|EAU74933.1| hypothetical protein RS9916_35537 [Synechococcus sp. RS9916]
Length = 334
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/298 (16%), Positives = 111/298 (37%), Gaps = 21/298 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FV 59
R V ++ A + D +++ + L S+FP ++ ++A + Q
Sbjct: 18 RSAVKRVVRSLWQAYLRWCRYDCVDLSAAFAYYTLQSIFPLLLIVLSIASWFLGRQVGLT 77
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+++ +P + + + Q++ + + + N L+ +R
Sbjct: 78 DQIVEYSANIFPPSVVALVRTTLDQLVRQGVGAGVLGAGVLLV-TAGNVYLTLQRGADRI 136
Query: 120 YRVVEMRS------------WYITRLISFGYVLLASVTLV---IMSFVFVAIPLALAYVR 164
+ V R+ + RL +F VLL + +V I + + + ALA
Sbjct: 137 WHGVLPRARVDLPWQQQVWQFVKVRLEAFVVVLLIGLLIVVDQISANLRMVPAAALADFV 196
Query: 165 KFFPALGNLLLII---WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
P L +L I GR L + + + LP+ + + ++PG +
Sbjct: 197 LSVPWLEGVLRYIPVLSFGRFLIPCLGFAVMALLLQFLLPSRRVPLKPLIPGAALIGVLL 256
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
V + + I++ + Y + S++ ++++M+GV G + + Y R+
Sbjct: 257 TVLNLAVSRSILSLGSRFQAYGVIGSVLVLTLWVWMVGVVLYYGQCWSVVIARGYLRR 314
>gi|227505354|ref|ZP_03935403.1| ribonuclease [Corynebacterium striatum ATCC 6940]
gi|227198056|gb|EEI78104.1| ribonuclease [Corynebacterium striatum ATCC 6940]
Length = 360
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 102/267 (38%), Gaps = 18/267 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D I + + E+ G A+ I+ ++L++FP + G P ++ V
Sbjct: 39 DHIMRMLGRYGEQGGNQFAAGITYFSVLAIFPLFMLAVA--GAATVLATRPDLMQQVQDQ 96
Query: 70 WPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYR---VV 123
++ + D + ++L ++ I L + + LRI ++ +
Sbjct: 97 IANSVSGDLGDTLNELLETAIAQRGAMYGIGGLTTLWSGLGWMNNLRIGISAMWDKDPNE 156
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA------YVRKFFPALGNLLLII 177
+++ +L ++ V L+I V A L + FP + +L++
Sbjct: 157 TQGNFFTQKLSDLLGLIGLLVALIIAFGVTAAGSSGLTQKVFEWVGIESFPGMDAVLVL- 215
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
I ++A F+ ++ +FLP S L G +++ L + I++ ++
Sbjct: 216 --AGIVIGLVANFLVFWWMIVFLPRTDVPTKSGLKGAAIGAVAFEAIKQL-STVIMSSAS 272
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ A ++ +V +Y++ +
Sbjct: 273 GNPAGAVFGPVIVLMVVMYLIWRVVLY 299
>gi|295835721|ref|ZP_06822654.1| ribonuclease BN [Streptomyces sp. SPB74]
gi|295825650|gb|EDY45725.2| ribonuclease BN [Streptomyces sp. SPB74]
Length = 317
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 94/273 (34%), Gaps = 6/273 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + D+ F DG+ A ++L +L+V P ++ L+ L + G
Sbjct: 33 WQLARDSFVRFRYADGFTNARALALQTVLAVTPLVIASVGLSTSLHTENLGRLAQLTLHG 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG---LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A+ + + + + G A+ + + + + NR Y
Sbjct: 93 VAAGPSAEVVDEALERGEYAAGDGDEIALWFGAIFSLVNVTTAMCQIERGANRIYGNERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYA 184
R +++ L A + L + V +A LA LG +W R
Sbjct: 153 RPFHLKYGRGLVMALTAGIPLGLGFVVMIAGGH-LATAATTVYGLGAHARAVWEYARWPL 211
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L I V P K + L G W + L + Y+ ++ T+Y
Sbjct: 212 GLLLALIAASVVFRSAPRRKQPGYTWLAFGAGVYLSLWTLLTYLLSLYLRLSGSFDTVYG 271
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L++ M+ L++ Y+ V LG A +
Sbjct: 272 PLSAFMSLLLWAYLTSVCLFLGLSFAAHLEASR 304
>gi|72383299|ref|YP_292654.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. NATL2A]
gi|124024878|ref|YP_001013994.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. NATL1A]
gi|72003149|gb|AAZ58951.1| putative serum resistance locus BrkB [Prochlorococcus marinus str.
NATL2A]
gi|123959946|gb|ABM74729.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. NATL1A]
Length = 304
Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 110/283 (38%), Gaps = 21/283 (7%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPT 61
+ +F ++ A E + + D +++ + L S FP ++ ++A FLG Q +
Sbjct: 7 KKARWLFSSLWRAYERWSKCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGKQQGIEQ 66
Query: 62 -VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+I++ P + + + Q++ G + A+ + N L+ +R +
Sbjct: 67 RIIELTAEVLPSEVIALVASTLEQLI-NQGFGAGILGAMFLMITAGNAYLTLQRGADRLW 125
Query: 121 R----VVEMRS--------WYITRLISFGYVLLASVTLVI---MSFVFVAIPLALAYVRK 165
V + R+ +F VLL + +VI + + + L +
Sbjct: 126 EDVLPVKSKPDPLRLQAFRFIRNRIEAFFVVLLVGILMVIDQISANIRLIPEAVLEDLAN 185
Query: 166 FFPALGNLLL---IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
P + N + ++ G+ ++ + + LP+ + + ++PG +
Sbjct: 186 TTPWVENAITKIPVLQVGQFILPLIGFSTMALLLQGLLPSRRVPLKPLIPGALMIGTLLT 245
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + + I++ + Y + ++ ++++M+GV G
Sbjct: 246 ILNLAVSRSILSLGSRFQAYGFIGGVLVLTLWVWMVGVIIYFG 288
>gi|108797332|ref|YP_637529.1| ribonuclease BN [Mycobacterium sp. MCS]
gi|119866417|ref|YP_936369.1| ribonuclease BN [Mycobacterium sp. KMS]
gi|126432954|ref|YP_001068645.1| ribonuclease BN [Mycobacterium sp. JLS]
gi|108767751|gb|ABG06473.1| ribonuclease BN [Mycobacterium sp. MCS]
gi|119692506|gb|ABL89579.1| ribonuclease BN [Mycobacterium sp. KMS]
gi|126232754|gb|ABN96154.1| ribonuclease BN [Mycobacterium sp. JLS]
Length = 387
Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/260 (18%), Positives = 106/260 (40%), Gaps = 20/260 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGAWPE 72
+ +V++ G +A+ I+ A +S+FP ++ G +G + +++ +P
Sbjct: 21 VVYKYVDDQGGYLAALITYYAFVSLFPLLLLLTTALGVVLVGRPELQRQIVESTVNQFP- 79
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEM-RSWYI 130
I +++ Q + + + + A + +GV +A++ ++N + V R I
Sbjct: 80 ----LIGEQLAQPEQLSGGAVAVVVGILGALYGGSGVGQAVQNAMNSVWAVPRNVRPDPI 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ +LL + I + + A+ A+ +L ++ G + T+
Sbjct: 136 RSRVRSLLLLLVLGSAAIAATLLSAVGRAV----------DDLGVLGTAGVVVGTIAINT 185
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIM 249
L+ + + +LPG + + W Y+ T S+ S A ++
Sbjct: 186 GILLVAFRTTTSRELTYRQVLPGALAGALIWQFLQWFGAGYVARTVSSASATNTVFALVL 245
Query: 250 TCLVFLYMLGVFFILGAELN 269
L FLY++ V +L AELN
Sbjct: 246 GLLAFLYLISVSLVLCAELN 265
>gi|218667673|ref|YP_002426315.1| YihY family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519886|gb|ACK80472.1| YihY family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 262
Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 109/269 (40%), Gaps = 11/269 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VV 66
+F I+ A F +D A ++ + L + P V G +L +G +D +V
Sbjct: 1 MFYRIFRAWHGFWNDDCIDRAGLLAYTTLFGLIPLAVLGFSLWNLVGFSLLHRAQVDDLV 60
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
++ I ++ + A A+ + L + + A+ N + V
Sbjct: 61 LRSFVPQTGGAILRQVNSIAARGAQ-MGLFGLLGLGITAILLLHAVERHFNAIWGV--TP 117
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ R++ + +L+A + + + L P L +L + T
Sbjct: 118 TCLWCRILRYMAMLVAGPLGIALILPLLGPLQPLLVYLAHIPLLPPVLSHV------LTF 171
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + + + ++ LP+A ++ + G + T I + + ++ Y+ FST+ T+Y L
Sbjct: 172 LVVTVMMGLLYKILPSAPTRWQDVFLGGVSTAILFEISKMVLAGYL-QFSTFETLYGALG 230
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L++LYM + GAE+ A+ + +
Sbjct: 231 AFPVFLLWLYMAWASVLFGAEMAAAGMTH 259
>gi|295699538|ref|YP_003607431.1| ribonuclease BN [Burkholderia sp. CCGE1002]
gi|295438751|gb|ADG17920.1| ribonuclease BN [Burkholderia sp. CCGE1002]
Length = 300
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 101/262 (38%), Gaps = 4/262 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ ++ F G +A ++ ALLS+ P ++ + + Q V + +
Sbjct: 18 RFLLQTLKAFRANQGLLLAGAVAYYALLSIVPLLILIVIVLSRVVPQQLVLDALSHLLRW 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR---VVEMR 126
+ + E+ L A + + L +FSS L +++ + VV+ R
Sbjct: 78 LVPGQSAALVRELSNFLQHRAV-IGWVLLLTMLFFSSLAFTVLENAMSLIFVHRVVVKRR 136
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ I+ L+ + Y++ V L+I++FV A+ A + F +L +
Sbjct: 137 HFLISALLPYCYIMFLGVGLLIVTFVSSALDTIGAEGLQLFGLHVSLRGFTRVMLYLLGL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L V+L +P + + L G + + W V + Y T S S +Y L
Sbjct: 197 AGEIFVLTSVYLVMPVGRPSLKHALIGGVVAGVLWEVTRHVLVWYFATLSQVSLVYGSLT 256
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
+ L+ L + GA++
Sbjct: 257 MAIVILLSFEWLATLLLFGAQV 278
>gi|299533766|ref|ZP_07047137.1| ribonuclease BN [Comamonas testosteroni S44]
gi|298718182|gb|EFI59168.1| ribonuclease BN [Comamonas testosteroni S44]
Length = 326
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 107/268 (39%), Gaps = 17/268 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAW 70
+ D+++ +++ DG M++ +S +LS+ P ++ L G+ +V T+I +
Sbjct: 22 LIDSVQLWLQADGLRMSAAMSFYGMLSLAPLLLAVVGLLGWWLDRSYVESTLISQIQSVV 81
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAY------RVV 123
E A+ + + L ++ L + GV L+ SL++ + R
Sbjct: 82 GERAAQLVKSALASAQNANQGSLASVLGLVMMLSGATGVFVELQASLDKLWSMGEESRPQ 141
Query: 124 EMRSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIW 178
E + W+ I+RL YV+ L++ + AI + + LG L+ +I
Sbjct: 142 ENKPWWSMAISRLWGLSYVVGLGFLLLVSMVLSTAIQMITKWANDELQLVPLGPLMGLIN 201
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G + + LF GL+ K +L G + + +G Y+ T +
Sbjct: 202 EGLSFCIAVLLFWGLM---RMGTGIKPVTRYLLLGSLTGAALFTIGKQALAWYLST-AAV 257
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGA 266
+ Y S++ L++ Y + A
Sbjct: 258 VSAYGAAGSLVVVLMWFYFTSAILLFSA 285
>gi|265750543|ref|ZP_06086606.1| ribonuclease BN [Bacteroides sp. 3_1_33FAA]
gi|263237439|gb|EEZ22889.1| ribonuclease BN [Bacteroides sp. 3_1_33FAA]
Length = 439
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 103/269 (38%), Gaps = 8/269 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R I +I F + AS ++ S LLS+ P + +A G + T
Sbjct: 29 RGILYNAIKIATLSIREFTQGRILNKASALTYSTLLSIIPILAILFAIARGFGFSNLLET 88
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
A+ I I L G+F + + + + + + N +
Sbjct: 89 QFRSGLEG-QSAAAETILGLIDSYLVHAKSGVFIGVGLVMLFWTILSLTYNIERTFNYIW 147
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V + R+ Y F +LL + +V+ S + + + + + F L L+ +
Sbjct: 148 QVKKPRTLYRKMTDYFSILLLLPLLIVLSSGLTIFMSTMVKNMEDFV-LLAPLMKFLVRL 206
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A+F GL F+P K K+ I+PG+I ++ L+ + S Y+
Sbjct: 207 VPFILTWAMFTGLFV---FMPNTKVKLRYAIIPGIIAGT-AFQAFQYLYIGSQIWVSRYN 262
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A+I L++ + + GAEL
Sbjct: 263 AIYGSFAAIPMFLLWAQISWGICLYGAEL 291
>gi|262384225|ref|ZP_06077360.1| ribonuclease BN [Bacteroides sp. 2_1_33B]
gi|262293928|gb|EEY81861.1| ribonuclease BN [Bacteroides sp. 2_1_33B]
Length = 414
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 106/271 (39%), Gaps = 9/271 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+E + + + A+ F E+ AS ++ S LLS+ P + +A G F
Sbjct: 1 MKEIYINIIKTVILAVRGFQSENLQTKASALTYSTLLSIVPLLAVLLGIAKGFG---FQG 57
Query: 61 TVIDVVFGAWPEVIAKP--ITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLN 117
TV +F +P + + + LA G + + + Y N + ++ + N
Sbjct: 58 TVRQELFDYFPGHEMELNKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLISSVEDTFN 117
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+++ + R WY L+ V + S + + + + L+ +
Sbjct: 118 DIWQIQKSRPWYRKISDYLALFLVLPVLMTASSGLSIFMSTLQNSFLGQYLFFTPLVELF 177
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ A + + +++ LP K + ++ L ++ + ++ + S
Sbjct: 178 LHI---APYIITTLAFTGLYVSLPNTKVRFVNGLVAGFIAGCAFQLFQFIYISGQIWVSK 234
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ +Y A++ L++L + + + GAEL
Sbjct: 235 YNAIYGSFAALPLLLLWLQLSWLICLFGAEL 265
>gi|119468243|ref|ZP_01611369.1| tRNA processing exoribonuclease BN; required for maturation of tRNA
encoded by bacteriophages; dimer [Alteromonadales
bacterium TW-7]
gi|119448236|gb|EAW29500.1| tRNA processing exoribonuclease BN; required for maturation of tRNA
encoded by bacteriophages; dimer [Alteromonadales
bacterium TW-7]
Length = 197
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 8/188 (4%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
I LAA + + + +LNR +R+ + R I+ + + + L V L V
Sbjct: 4 VGIGFLAAV--ALLLIRNVDATLNRIWRIKKKRPMMISFAVYWMVLSLGPVLLGASIGVT 61
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
I +++ + P LL + +G I ++ +P + + +PG
Sbjct: 62 SYIVSLVSFADQGIPGFSGFLLKL------LPYGISMMGFIMLYTLVPNTRVSFKAAVPG 115
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+F + + + F YI F +Y +Y +A+I V++Y+ V +LGAE A +
Sbjct: 116 ALFAALLFELTKKGFALYISHFPSYEVIYGAVATIPILFVWVYLAWVVVLLGAEFTACIS 175
Query: 274 IYYWRKKP 281
P
Sbjct: 176 PNDIEDTP 183
>gi|309779255|ref|ZP_07674018.1| serum resistance protein [Ralstonia sp. 5_7_47FAA]
gi|308922059|gb|EFP67693.1| serum resistance protein [Ralstonia sp. 5_7_47FAA]
Length = 337
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 107/288 (37%), Gaps = 10/288 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 9 RALLKRSAQVLIGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRA 119
+ + G A + + + ++A+ ++ L+ SL+
Sbjct: 69 EIFGQIEGLVGAQGASAVEAVLAATRRSGSGLFAAVTAVVLLLAGATTAFSELKDSLDEL 128
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V + +RL+SF +L+ + L++ V A+ + + + + +
Sbjct: 129 WEVPSRQQPGMWGLLRSRLLSFSLILVLAFLLLVSLTVNAALAVVERFWGALWSGSTSSI 188
Query: 175 LIIWNGRIYATMLALFIGLIF--VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ + + + L+F + LP + + G + T + + +G L Y+
Sbjct: 189 ALAAAQVLSSAFSFAVVALLFGTIFKMLPETRVAWRDVALGAVVTALLFTLGKHLIGLYL 248
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 249 GN-SAVASSYGAAGSVVALMLWIYYSAQIFFFGALVTRQYALQFGSRQ 295
>gi|170078320|ref|YP_001734958.1| ribonuclease BN-like family protein [Synechococcus sp. PCC 7002]
gi|169885989|gb|ACA99702.1| Ribonuclease BN-like family [Synechococcus sp. PCC 7002]
Length = 399
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/242 (17%), Positives = 96/242 (39%), Gaps = 18/242 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG---AHQ 57
+R + + +Y I + +++ I+ + +LS+FP I+ G +Q
Sbjct: 5 LRFFLFLNHRTLYWTIRQALRRRLLGLSAEIAFNVMLSLFPTIIMALTALGLFTATLDNQ 64
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + P + + + ++ P+K LF++S +A + SS + A +L+
Sbjct: 65 TILQLASYYEDVMPVSVWTLLREFAAEISKTPSKSLFSVSFVATIWVSSGALSAAMNALD 124
Query: 118 RAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG---- 171
+ + + + R ++ +L+S L A L+ SF+ + + L
Sbjct: 125 QIHEIPPEQRRPFWKAKLMSIFITLGAIALLIFASFLVLVGDSVIKVGLDLIVRLPVDTT 184
Query: 172 --NLLLIIWNGRIYATMLALFIGLIF----VHLFLPAAK---SKIMSILPGVIFTWISWV 222
N+L+ +W + L L G+I + P + K+ + G++ I++
Sbjct: 185 GVNVLVTLWRLLSFPLALGLGTGIIAMVINILTSPPDRRHPLRKLKQMSFGLVIALIAFF 244
Query: 223 VG 224
Sbjct: 245 AL 246
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ +SFG V+ + + L + + L NLL+I+W
Sbjct: 223 RHPLRKLKQMSFGLVIALIAFFALCFSILFIQNLIVDMEINY--DLANLLVILWRFLSLP 280
Query: 185 TMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
LA+ I F++ + K M ILPG + +SW + + LF Y+ F Y+ +Y
Sbjct: 281 VALAIVSIAFAFIYSMGSSRLIKGMPILPGAVLGAVSWAIISSLFRLYVANFGQYNRVYG 340
Query: 244 GLASIMTCLVFLYMLGVFFILGAELN 269
+ + + +++L + + +LG +LN
Sbjct: 341 AVGTAIILMLWLQLSALVMLLGDQLN 366
>gi|297569696|ref|YP_003691040.1| ribonuclease BN [Desulfurivibrio alkaliphilus AHT2]
gi|296925611|gb|ADH86421.1| ribonuclease BN [Desulfurivibrio alkaliphilus AHT2]
Length = 474
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 96/285 (33%), Gaps = 35/285 (12%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW------ 70
F + AS ++ + +LS+ P + G + LGA +
Sbjct: 46 REFNRDRIPLRASALTFTIMLSLVPTLALGTAVLKGLGADDQMRQAAHRFIDQMEASTAI 105
Query: 71 ----------------PEVIAKPI----------TDEILQVLAVPA-KGLFTISALAAAY 103
P A+ + D+I + L +
Sbjct: 106 WGESGEMVPNGNDHSAPPATAEQLPGTTDHLREAVDQIFAYVDRTDFTTLGAFGVVGLVA 165
Query: 104 FSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ ++ S+N ++ R + R + L+ + L + + L +
Sbjct: 166 AVIIVLGSIERSMNAIWQAGGGRP--MGRRMMDYLALMIMLPLAVNLTLATEATLQSEAL 223
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
++ + L+ +L L + ++ FLPA + L G +F + W+V
Sbjct: 224 QERLQFFLPMGLLESILLDLLPLLLLTLTFTLLYRFLPATRVNFTPALIGGLFGAVLWLV 283
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
L+ + + Y+ +Y A++ LV+L + + F+ GAE+
Sbjct: 284 VQGLYLKMQIGVARYNAIYGSFATLPLFLVWLQLCWIIFLAGAEM 328
>gi|262201713|ref|YP_003272921.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
gi|262085060|gb|ACY21028.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
Length = 377
Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 102/277 (36%), Gaps = 13/277 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+E + + G A+ IS + +L++ P I+ G +A F+ + + + + + A P
Sbjct: 61 TVERYNDRRGNVYAAGISFNGILAIVPIIMVGFAIAAFVLASRPELLDELKNAIVDAMPG 120
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ D I + A + I AA+ + +R++ Y R+ +++
Sbjct: 121 QAGDQLGDVIDSAIDSRAT-VGLIGLFGAAFTGIGWISGVRVAFTEMYGGRVDRNPVMSK 179
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ +L V + L + +L + R+ + ++++F
Sbjct: 180 VWDLVTFVLLGVAFAATMALTALGNSGLTTKLLSWVSLDDASWAPVVVRVVSILISVFAS 239
Query: 193 LIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ LP ++ + + T I++ + L Y+ + + A I+
Sbjct: 240 WLLFTFVLARLPLVPLPFVNAMKAGLATAIAFEIVKSLGGLYLKSVLSSPAGIA-FGPIL 298
Query: 250 TCLVFLYMLGVFFILGAE------LNASMIIYYWRKK 280
+VF Y+ + + +NA+ + ++
Sbjct: 299 GLMVFAYLASRIVLYASAWCATDPINAAYQVEEEDER 335
>gi|264676371|ref|YP_003276277.1| ribonuclease BN [Comamonas testosteroni CNB-2]
gi|262206883|gb|ACY30981.1| ribonuclease BN [Comamonas testosteroni CNB-2]
Length = 326
Score = 86.4 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 107/268 (39%), Gaps = 17/268 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAW 70
+ D+++ +++ DG M++ +S +LS+ P ++ L G+ +V T+I +
Sbjct: 22 LIDSVQLWLQADGLRMSAAMSFYGMLSLAPLLLAVVGLLGWWLDRSYVESTLISQIQSVV 81
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAY------RVV 123
E A+ + + L ++ L + GV L+ SL++ + R
Sbjct: 82 GERAAQVVKSALASAQNANQGSLASVLGLVMMLSGATGVFVELQASLDKLWSMGEESRPQ 141
Query: 124 EMRSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIW 178
E + W+ I+RL YV+ L++ + AI + + LG L+ +I
Sbjct: 142 ENKPWWSMAISRLWGLSYVVGLGFLLLVSMVLSTAIQMITKWANDELQLVPLGPLMGLIN 201
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G + + LF GL+ K +L G + + +G Y+ T +
Sbjct: 202 EGLSFGIAVLLFWGLM---RMGTGIKPVTRYLLLGSLTGAALFTIGKQALAWYLST-AAV 257
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGA 266
+ Y S++ L++ Y + A
Sbjct: 258 VSAYGAAGSLVVVLMWFYFTSAILLFSA 285
>gi|299140346|ref|ZP_07033509.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
gi|298597680|gb|EFI53855.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
Length = 319
Score = 86.4 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 100/262 (38%), Gaps = 4/262 (1%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + A ++ +LS+FPFIV L+ + + V+ + + +
Sbjct: 53 MTKTEVHTYAFSVAAQVILSLFPFIVLMLTLSQKVFHSAKMFDVVGEMMTHFLPNNQDFV 112
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ + K +S + ++ L ++LN + V + RS+ +++S G
Sbjct: 113 MRNMRVLAYAHTKTKL-VSVVMLFITATGVFLPLEVALNSVWGVRKNRSYLQNQVVSIGL 171
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV-H 197
+ + L + S A + F G + I + + IGL F+ +
Sbjct: 172 AVGVA-ALAMSSVALSAGQRTVMSWIFFGHTDGMVFNFIAHIFMKLCATIASIGLFFLIY 230
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
LP K ++LP I + W L+ + + ++Y ++ +++ ++
Sbjct: 231 WVLPNRKIPARAVLPTAIIVGLLWEGAKYLYVLALPHLD-FRSVYGPFEVSVSLIMWAFI 289
Query: 258 LGVFFILGAELNASMIIYYWRK 279
G+ + GA ++A+ +
Sbjct: 290 SGLLLLAGAYVSATRQALRETR 311
>gi|284166459|ref|YP_003404738.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284016114|gb|ADB62065.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 258
Score = 86.4 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/250 (15%), Positives = 93/250 (37%), Gaps = 14/250 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ + +A+ I+ A +S P ++ +A F+G V ++ + ++
Sbjct: 13 DRNLTFLAAGIAYYAFVSTIPLLLLAVTIASFVGGQALADRVASMLSQQLSSSGQQMVSQ 72
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ A + + + + L + + Y +S +
Sbjct: 73 ALTNPSGRAAASV--VGFFGVVWSALKLFRGLDQAFDEIYADEVD--------VSLLGQV 122
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ +++ + VA+ +A+ ++ + ++ L I + ++ L
Sbjct: 123 WDGIVVIVGIALSVALVVAVGAALSILNLQIPFANVLGS---LVLIVVLAIAFLPIYYVL 179
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P + S+LPG I I WV+ + F Y Y+ Y + +++ + +LY +
Sbjct: 180 PPMDVSVRSVLPGTIVAAIGWVLLQIGFRIYAANAGKYAA-YGVIGAVLLFVTWLYFGSI 238
Query: 261 FFILGAELNA 270
+LGA +NA
Sbjct: 239 VILLGAAVNA 248
>gi|313125785|ref|YP_004036055.1| membrane protein [Halogeometricum borinquense DSM 11551]
gi|312292150|gb|ADQ66610.1| predicted membrane protein [Halogeometricum borinquense DSM 11551]
Length = 355
Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 89/262 (33%), Gaps = 15/262 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + E MA I+ A +S+ P + +A +V +
Sbjct: 18 LLRALVHEIRTEKLTFMAGSIAYHAFVSLLPLFLLLLAIAATFQNQTLDDSVRTLAGVVL 77
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
E E + A + G+ + + L + + Y ++
Sbjct: 78 TEGTRDDFFAEATR--ATQSTGVSLFGGAVLLWGTLRIFRGLDTAFSDIYESEASNTFGD 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L ++ LVI S V A+ + + W +L L
Sbjct: 136 QIRDGILVLLTLAIVLVIGSVVNDAVGTV------------SSGTVAWLIGRLFLILGLS 183
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L ++ P ++ ++PG + + V LF Y S + + +A I+
Sbjct: 184 LALYPMYYVFPDTDVSLLEVVPGTLTAAVGLTVFESLFQLYTA-VSNTAPNSSVVAGILV 242
Query: 251 CLVFLYMLGVFFILGAELNASM 272
L +LY G+ +LGA +NA +
Sbjct: 243 LLTWLYFSGLVILLGAAVNAVL 264
>gi|167724455|ref|ZP_02407691.1| putative ribonuclease [Burkholderia pseudomallei DM98]
Length = 270
Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 53/254 (20%), Positives = 95/254 (37%), Gaps = 13/254 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYMLG 259
S L++LY
Sbjct: 257 GSFAVLLMWLYFSA 270
>gi|237710955|ref|ZP_04541436.1| ribonuclease BN [Bacteroides sp. 9_1_42FAA]
gi|237727253|ref|ZP_04557734.1| ribonuclease BN [Bacteroides sp. D4]
gi|229434109|gb|EEO44186.1| ribonuclease BN [Bacteroides dorei 5_1_36/D4]
gi|229454799|gb|EEO60520.1| ribonuclease BN [Bacteroides sp. 9_1_42FAA]
Length = 439
Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 103/269 (38%), Gaps = 8/269 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R I +I F + AS ++ S LLS+ P + +A G + T
Sbjct: 29 RGILYNAIKIATLSIREFTQGRILNKASALTYSTLLSIIPILAILFAIARGFGFSNLLET 88
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
A+ I I L G+F + + + + + + N +
Sbjct: 89 QFRSGLEG-QSAAAETILGLIDSYLVHAKSGVFIGVGLVMLFWTILSLTYNIERTFNYIW 147
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V + R+ Y F +LL + +V+ S + + + + + F L L+ +
Sbjct: 148 QVKKPRTLYRKMTDYFSILLLLPLLIVLSSGLTIFMSTMVKNMEDFV-LLAPLMKFLVRL 206
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A+F GL F+P K K+ I+PG+I ++ L+ + S Y+
Sbjct: 207 VPFILTWAMFTGLFV---FMPNTKVKLKYAIIPGIIAGT-AFQAFQYLYIGSQIWVSRYN 262
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A+I L++ + + GAEL
Sbjct: 263 AIYGSFAAIPMFLLWAQISWGICLYGAEL 291
>gi|212694774|ref|ZP_03302902.1| hypothetical protein BACDOR_04307 [Bacteroides dorei DSM 17855]
gi|212662628|gb|EEB23202.1| hypothetical protein BACDOR_04307 [Bacteroides dorei DSM 17855]
Length = 442
Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 103/269 (38%), Gaps = 8/269 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R I +I F + AS ++ S LLS+ P + +A G + T
Sbjct: 32 RGILYNAIKIATLSIREFTQGRILNKASALTYSTLLSIIPILAILFAIARGFGFSNLLET 91
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
A+ I I L G+F + + + + + + N +
Sbjct: 92 QFRSGLEG-QSAAAETILGLIDSYLVHAKSGVFIGVGLVMLFWTILSLTYNIERTFNYIW 150
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V + R+ Y F +LL + +V+ S + + + + + F L L+ +
Sbjct: 151 QVKKPRTLYRKMTDYFSILLLLPLLIVLSSGLTIFMSTMVKNMEDFV-LLAPLMKFLVRL 209
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A+F GL F+P K K+ I+PG+I ++ L+ + S Y+
Sbjct: 210 VPFILTWAMFTGLFV---FMPNTKVKLKYAIIPGIIAGT-AFQAFQYLYIGSQIWVSRYN 265
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A+I L++ + + GAEL
Sbjct: 266 AIYGSFAAIPMFLLWAQISWGICLYGAEL 294
>gi|78188903|ref|YP_379241.1| ribonuclease BN [Chlorobium chlorochromatii CaD3]
gi|123579942|sp|Q3AS27|Y935_CHLCH RecName: Full=UPF0761 membrane protein Cag_0935
gi|78171102|gb|ABB28198.1| tRNA-processing RNAse BN [Chlorobium chlorochromatii CaD3]
Length = 432
Score = 86.4 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/267 (11%), Positives = 93/267 (34%), Gaps = 8/267 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPT 61
+ + + + + + + + A ++ LLS+ P + ++ F +
Sbjct: 19 KRYERMVAFVAFFRTNLLHDRIFISAGSLAFQTLLSIVPVLAVVLSVLNLFEVFTPFQHS 78
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + + + +L+ + + + +L + + + + +LN +
Sbjct: 79 LETFLVENFMPATGRLLHGYLLEFV-GKTGNIPLLGSLLLFVIALSLLSTVDQTLNDIWG 137
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R G+ L +V + + ++ + F G L +
Sbjct: 138 IRAPRKALQ------GFTLYWTVLTLGPLLIVSSLAASSYVWYTIFTDEGALFELKTRLL 191
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +++ +P + +I G + + + F Y+ +T+ +
Sbjct: 192 ALFPFINSIVAFFLLYMLVPKRRVRIAHAFAGALVASLLLELSKRWFLFYVTHVATFEHI 251
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y L+ + ++Y+ V ++GAE
Sbjct: 252 YGALSVVPMLFFWVYLAWVVVLVGAEF 278
>gi|187925962|ref|YP_001892307.1| ribonuclease BN [Ralstonia pickettii 12J]
gi|241665445|ref|YP_002983804.1| ribonuclease BN [Ralstonia pickettii 12D]
gi|187727716|gb|ACD28880.1| ribonuclease BN [Ralstonia pickettii 12J]
gi|240867472|gb|ACS65132.1| ribonuclease BN [Ralstonia pickettii 12D]
Length = 329
Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 101/286 (35%), Gaps = 8/286 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ F I+ A + + + + +S L S+ P +V ++AG Q
Sbjct: 10 RDVFRRTARILLGAAQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF--SSNGVEALRISLNRA 119
I + IL GLF A ++ L+ SL+
Sbjct: 70 EIFGQIQGLVGAQGAAAVETILAATKRSGHGLFAAVMALALLVVGATTAFSELKDSLDEL 129
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V + +RL+SF VL+ + L++ + A+ + + + + G
Sbjct: 130 WDVPPRQQPGLWGLLRSRLLSFSLVLVLAFLLLVSLIINAALAVLERFWGAIWESAGLFA 189
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + + + + LP + + G + T + + +G L Y+
Sbjct: 190 PIAEAFSSVFSFAVVSLLFGTIFKMLPETRVAWRDVALGAVVTALLFTLGKHLIGLYLGN 249
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 250 -SAVASSYGAAGSVVALMLWIYYSAQIFFFGALVTRQYALQFGSRQ 294
>gi|253998784|ref|YP_003050847.1| ribonuclease BN [Methylovorus sp. SIP3-4]
gi|313200870|ref|YP_004039528.1| ribonuclease bn [Methylovorus sp. MP688]
gi|253985463|gb|ACT50320.1| ribonuclease BN [Methylovorus sp. SIP3-4]
gi|312440186|gb|ADQ84292.1| ribonuclease BN [Methylovorus sp. MP688]
Length = 309
Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 100/280 (35%), Gaps = 15/280 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
Y + + AI + + + ++ + S+ P +V + G+ Q
Sbjct: 13 RYLNCMRQLFTSAIVAWFAHRATSKGAALAFYTIFSLTPILVLVIAVTGYFLGEQSAQGH 72
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAY 120
+ + +L G+ ++AL ++ L+ SL+ +
Sbjct: 73 VVAELSMLVGDSGARVISSLLAASHNHTSGIIASVVAALLIFIGATTVFAELKASLDEIW 132
Query: 121 RVVEM--------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
V + + ITRL SFG +++ S L+ + L Y F +
Sbjct: 133 EVEKAVVSNKHAFKQLLITRLTSFGLIIILSALLMSSLLASAGLGLIEHYANYFLGGYLD 192
Query: 173 LLLIIWNGRIYATML----ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
LL Y + L + V+ LP + ++ G + T + + +G +L
Sbjct: 193 FLLQHMAIFKYISTLLSFAVITAMFAVVYKMLPDVRLSWSDVVVGAVLTALLFGLGKLLI 252
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ S S+ + S++ L+++Y F GAE+
Sbjct: 253 GMYLSR-SGISSSFGAAGSLIALLLWIYYSAQIFFFGAEV 291
>gi|209526823|ref|ZP_03275343.1| ribonuclease BN [Arthrospira maxima CS-328]
gi|209492694|gb|EDZ93029.1| ribonuclease BN [Arthrospira maxima CS-328]
Length = 257
Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/257 (17%), Positives = 103/257 (40%), Gaps = 11/257 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TV 62
V ++ + I + ++ +A+ ++ + S+ P ++ +AG + V
Sbjct: 2 NLATVKSLLKETITEWQKDKVPILAAALAYYMVFSLAPLLMIVIAVAGSIVGEAVAQKEV 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
I+ + E A I + I + + TI + F++ + A L+ SLN +
Sbjct: 62 IEQLETLMGEQGASVIANAIQSQFQPSSSIITTIIGVVTLLFAATTIFAQLKESLNIIWH 121
Query: 122 VVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V + +R++S VL+ + L++ + + ++ K L +
Sbjct: 122 VEVRPGQGIWEFIRSRILSVIMVLIVGLLLLMSLGISSFLAGMSDWLDKVVSIPSLLRSL 181
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I NG + + + I ++ LP K + G T I +++G L + Y+ +
Sbjct: 182 IDNG---VSFILITILFGQIYRILPDVKIAWSDVAVGSGITAILFIIGRTLISFYLGR-A 237
Query: 237 TYSTMYAGLASIMTCLV 253
T ++ Y +S + L+
Sbjct: 238 TVASAYGAASSFVVLLL 254
>gi|298370006|ref|ZP_06981322.1| YihY family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281466|gb|EFI22955.1| YihY family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 408
Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/268 (18%), Positives = 108/268 (40%), Gaps = 9/268 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVID 64
+F + + F E +A+ ++ ++LL++ P + +A ++ + +
Sbjct: 13 GKLFGFAWFVVRRFNEVRVPQVAASLTFTSLLALVPVLTVAVVIASAFPVFDEWSNSFVG 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ A + D + Q A ++ L I ++ S ++ + + NR +RV
Sbjct: 73 FINRTIVPQGADMVFDYLNQFRAKASR-LTAIGSVMLVVTSLLLIQTVDSTFNRIWRVSA 131
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L+ + +L + + + L + + P L L ++
Sbjct: 132 QRPLLMQFLV-YWALLTFGPLSLGVGLSLLFGLLHGSGLETSSPLLAGWL------KVGV 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L FV+ F+P L G T + +LF Y+ F+ Y+++Y
Sbjct: 185 SVGCSTAVLWFVYCFVPNRYVPARQALAGAFLTAACLEIARILFAWYMGRFNGYTSIYGA 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASM 272
A++ L++L++L + GA L AS+
Sbjct: 245 FAAVPFFLLWLHLLWTLVLSGAVLTASL 272
>gi|237807236|ref|YP_002891676.1| ribonuclease BN [Tolumonas auensis DSM 9187]
gi|288559245|sp|C4L9W1|Y461_TOLAT RecName: Full=UPF0761 membrane protein Tola_0461
gi|237499497|gb|ACQ92090.1| ribonuclease BN [Tolumonas auensis DSM 9187]
Length = 302
Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/260 (17%), Positives = 98/260 (37%), Gaps = 10/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF--GAWPE 72
+ +A H++ +LLS+ P + ++ +L + ++ PE
Sbjct: 33 FWRRVWHDRLPVLAGHLAYVSLLSIVPLLAVVFSVLSWLPRFSYFRRQFELFMFSNFVPE 92
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + A +I L + + A+ ++N +R R W T
Sbjct: 93 T--EIAFRYHFSLFVKNASKTTSIGLLMLVLLALLLIAAIDENMNHIWRCRGQRKWLKTI 150
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ Y ++ V +++ + + + + +L + Y L G
Sbjct: 151 TM---YSIVLGVVPLLVGGSLLLSSQIQGWALWHYELVSSLGGGLLELLPYLLSLG---G 204
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ ++ +P + L G + + V F +YI F TY ++Y LA I +
Sbjct: 205 ILLLYKVVPNIYVRWQHALLGATLAALLFEVAKEGFGYYIAHFGTYKSIYGALAGIPILM 264
Query: 253 VFLYMLGVFFILGAELNASM 272
++LYM + +LGAE A++
Sbjct: 265 IWLYMSWLVVLLGAEFTATL 284
>gi|56476355|ref|YP_157944.1| ribonuclease BN falily [Aromatoleum aromaticum EbN1]
gi|56312398|emb|CAI07043.1| conserved hypothetical protein,ribonuclease BN falily [Aromatoleum
aromaticum EbN1]
Length = 317
Score = 86.0 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 100/276 (36%), Gaps = 12/276 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALL-SVFPFIVFGANLAGFLGAHQFV 59
MR+ F ++ + ++++ D + A+ ++ + I+ + + LG
Sbjct: 1 MRKVLGYWFGVLRRTVNYWLDSDAFIHAAALAFFTVFSVAPVVIIVVSIVGAVLGEDAAR 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNR 118
+ + A A+ + + L T+ + A F + V A ++ SLN
Sbjct: 61 GQIAAQLEQAIGPEAAQAVQTAVASSRLEATGLLPTLVGIGAMLFGATTVFAQMQRSLNA 120
Query: 119 AYRVVEMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+ V+ S RL+S VL L++ + V + +A+ + P
Sbjct: 121 IWGVMAKPSRSSVFLLVKARLLSLMVVLAIGFVLLVSLLLSVIVNSLIAFASDWLPVPAP 180
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
LL + A + LF + LP + + G T + G L Y+
Sbjct: 181 LLAGVETVVSLAVVTLLFGT---IFRVLPDVILRWKDVALGAFVTAALFTFGRSLIALYL 237
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ ++ Y S++ L+++ + + GA
Sbjct: 238 AKTAP-ASTYGAAGSLVLLLLWVNYSSLILLFGAAF 272
>gi|319760991|ref|YP_004124928.1| ribonuclease bn [Alicycliphilus denitrificans BC]
gi|317115552|gb|ADU98040.1| ribonuclease BN [Alicycliphilus denitrificans BC]
Length = 299
Score = 86.0 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 107/265 (40%), Gaps = 14/265 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAW 70
+ A++ +++ +G M++ +S +LS+ P ++ + G+ ++ + ++ V G
Sbjct: 18 LLRAVQLWLDAEGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWVDKAYLESSLVAQVQGVM 77
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAY----RVVEM 125
E A+ + + A L +I+ + GV A L+ +L R + E
Sbjct: 78 GERGAEVVRMALASAKAPAQGWLASIAGFVLLLSGATGVFAELQSALARLWVHGRAAPER 137
Query: 126 RSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGR 181
+ W+ RL YVL L+I + AI + + P G LL +
Sbjct: 138 KPWWHMASLRLRGLAYVLAIGFLLLISLVLSTAIKVLATWAGALLPFGAGVLLQFVNEAV 197
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+A + LF+GL+ K + ++ G + G L Y+ T + +
Sbjct: 198 AFAVAVLLFVGLM---RIGSGPKPPLSCLVLGAAVGAALFTAGKQLLAWYLST-AAVVSA 253
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
Y S++ L+++Y + GA
Sbjct: 254 YGAAGSLVVLLMWIYFSSAVLLFGA 278
>gi|126643052|ref|YP_001086036.1| putative ribonuclease (Rbn) [Acinetobacter baumannii ATCC 17978]
Length = 366
Score = 86.0 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 91/239 (38%), Gaps = 8/239 (3%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
F+V +++ A Q + +I P+ D+ L + L I L
Sbjct: 5 FLVIISSIKALEPARQQLQHLI--YSNFLPKSTIAF--DKALNAFTEKSSNLTVIGVLFL 60
Query: 102 AYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA 161
+ + ++ NR +RV E RS + + + ++ ++ +FV + ++
Sbjct: 61 FVTTVLMLTSIETVFNRIWRVKETRSGIVG-FMRYWTIISLGPIILGSAFVISSTVASMN 119
Query: 162 YVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+ F + + + +G ++ +P + + + +
Sbjct: 120 LLSNNFTGYQLDGAFL---LWLISFVLTILGFFILYWTIPNRTVPLYAAAIAACLSAALF 176
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LF+ + F++Y +Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 177 ETLKNLFSFVMSNFTSYEIIYGAFAAVPIFLLWVFLSWNIVLLGVEVSFALTAFHSGKE 235
>gi|258648610|ref|ZP_05736079.1| YihY family protein [Prevotella tannerae ATCC 51259]
gi|260851396|gb|EEX71265.1| YihY family protein [Prevotella tannerae ATCC 51259]
Length = 413
Score = 85.7 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 90/267 (33%), Gaps = 4/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R V + +A F E A A ++ S L +V P + +A G +
Sbjct: 12 RFIRYRVVRLYLNAGITFYREGQLAAARALTFSLLFAVVPILAIAFAIAKGFGLDNMLEQ 71
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I F PEV + ++ + + + + + N+ ++
Sbjct: 72 QIRTAFATQPEVTTFLLNFVHNYLMRTQGGIFLGLGIFLLLWTLFSLAGEIEGTFNKIWK 131
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R+ Y L V L+ S + + + + F +LL +
Sbjct: 132 VKQDRTIYRKVTEYTSLFFLLPVLLISSSGFSIFLTSFVEKLPDIFFLHNSLLKCLQ--- 188
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + ++ F+P K K S + ++ ++ H + S Y+ +
Sbjct: 189 -LVPYLIMVCFCTGLYFFIPNTKVKWKSAFFAGLPVGLALQALQYVYIHSQLYLSGYNAI 247
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A++ +++L + GA L
Sbjct: 248 YGSFAALPMLMIWLQFSWYIVLFGATL 274
>gi|71908681|ref|YP_286268.1| ribonuclease BN [Dechloromonas aromatica RCB]
gi|71848302|gb|AAZ47798.1| tRNA-processing RNAse BN [Dechloromonas aromatica RCB]
Length = 275
Score = 85.7 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 95/260 (36%), Gaps = 10/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV--FGAWPE 72
F E+ ++ ++ + L+++ P + ++A + V +D++ P
Sbjct: 18 VFHRFYGENMMQTSAALAFTTLMALVPLVTVVLSVAHAVPYLDLVVARLDLMVREALLPV 77
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
A I I + + A+ L + + + + + + N +RV R
Sbjct: 78 GAAGAIVGNIGK-FSQKAQNLTLVGLGGLSVTAFLLMNTIERAFNHLWRVSPRPILARLR 136
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L +F + V + + A + + + L +
Sbjct: 137 LYAFVMAVWPFVLGAVAGVMSFA-------ITSSLGLFDEPMWFRRIALKVLATVLLGLF 189
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
F++ +P A+ + L G +F +++ +F ++V+ + ++Y A+ L
Sbjct: 190 FSFLYYAVPNAEVSRRAALVGGVFAALAFAAMQKVFELFLVSSAMLKSIYGAFAAFPVFL 249
Query: 253 VFLYMLGVFFILGAELNASM 272
V+L++ + G L AS+
Sbjct: 250 VWLHLSWAVVLFGGLLAASV 269
>gi|38233243|ref|NP_939010.1| hypothetical protein DIP0636 [Corynebacterium diphtheriae NCTC
13129]
gi|38199502|emb|CAE49153.1| Putative membrane protein [Corynebacterium diphtheriae]
Length = 386
Score = 85.7 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 100/267 (37%), Gaps = 18/267 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD + E + +E G ++ I+ ++LS+FP ++ A + A Q P + +
Sbjct: 66 FDHLMRMNERYSQEGGNQYSAGITYFSVLSMFPILMLVMAAAATILARQ--PETLQQLQE 123
Query: 69 AWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + I D + ++L +F I L A + + + LR ++ +R
Sbjct: 124 RITDSVDASIADTLKEILDTAISQRGAMFGIGGLTALWSGLSWMSHLRYGASKMWRYPVT 183
Query: 126 R-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGR 181
++ T+ F L V + I + L L + + L+ +
Sbjct: 184 GDNFAKTKFQDFLGFLSLLVAMGIALGITAIGSSGLTTQLIDAIGLADVPGIFLLTFVIS 243
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSIL----PGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++A F +++ +LP + S L G + I + + F++ + +
Sbjct: 244 LVVGLIANFCVFLWLIKYLPRGEVPAKSALKAAGIGAVLFEIFKQLASQFFSNALSNPAG 303
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFIL 264
A I+ +V LY + +
Sbjct: 304 -----ATFGPIIGLMVLLYFVWRILMY 325
>gi|162149554|ref|YP_001604015.1| ribonuclease [Gluconacetobacter diazotrophicus PAl 5]
gi|209544792|ref|YP_002277021.1| ribonuclease BN [Gluconacetobacter diazotrophicus PAl 5]
gi|161788131|emb|CAP57735.1| putative ribonuclease [Gluconacetobacter diazotrophicus PAl 5]
gi|209532469|gb|ACI52406.1| ribonuclease BN [Gluconacetobacter diazotrophicus PAl 5]
Length = 302
Score = 85.7 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 53/302 (17%), Positives = 113/302 (37%), Gaps = 34/302 (11%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVI 63
+ +I +I +F++++G + + I+ + S+ P + ++ G L GA V
Sbjct: 2 IGTAWAVIRQSIANFIDDEGLSRGAAIAFYTMFSIVPVLAIIVDVVGVLYGAEATRGAVF 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRV 122
D + A + D ++ PA I+ +A ++ GV L+ +LN +R
Sbjct: 62 DQIRAVMGPDNAGALQDMLIASHRSPASLPARIATVAMLLVTATGVFGELQTALNVVWRH 121
Query: 123 VEMRSW----------------------------YITRLISFGYVLLASVTLVIMSFVFV 154
R+++ G + + L++ V
Sbjct: 122 DTADGIAARPAAAPPPDTPPPATPPPATPWMTALLYQRVLALGLIAALAGLLLVSLTVNT 181
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
A+ L ++ FP L+ + + ++ LF + LP + I G
Sbjct: 182 ALATLLGHIHWNFPGQVRLVQALNLSLSFGLVMTLFAATFHL---LPDHELAWRDIWTGA 238
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T + +++G L YI + +T Y +++ ++++Y F+LGAE ++
Sbjct: 239 AITALLFMIGETLIGLYIGNLVS-ATSYGAAGALIVVMLWIYYSAQIFLLGAEFTRAIAA 297
Query: 275 YY 276
Sbjct: 298 RR 299
>gi|167899031|ref|ZP_02486432.1| putative ribonuclease [Burkholderia pseudomallei 7894]
Length = 269
Score = 85.7 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 53/253 (20%), Positives = 95/253 (37%), Gaps = 13/253 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + + ++G IS A +S +L +L+ + R
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RLISFG VL + L++ + A+ ++ ++ ++I +
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVL----DTAITFIGRWLWGASPYVVIGNLLQFSIG 197
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L + FLP A+ + G I + + + G LF Y+ T ++ +
Sbjct: 198 IAVLAFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGT-ASAFGAA 256
Query: 246 ASIMTCLVFLYML 258
S L++LY
Sbjct: 257 GSFAVLLMWLYFS 269
>gi|238896971|ref|YP_002921716.1| hypothetical protein KP1_5213 [Klebsiella pneumoniae NTUH-K2044]
gi|238549298|dbj|BAH65649.1| hypothetical protein KP1_5213 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 343
Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ A + + D +
Sbjct: 60 LLRAAERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLAWHPTLLQDIFDKILQN 119
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + L A Y N + LR ++ ++ V E R
Sbjct: 120 VSDPTLAATLKNTINTAVQQRTAVGLVGLLVALYSGINWMGNLREAIRAQSRDVWERRPQ 179
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
++ ++ V L+I + A + L N+ + R+
Sbjct: 180 DEEKIWVKYFRDLISLIGLLVALIITLSITSVAGSAQQMIISAL-YLDNIEWLKPAWRLI 238
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + ++ G + I + + ++ T + S
Sbjct: 239 GLAISIFANYLLFFWIFWRLPRHRPRRKALFRGTLIAAIGFEIIKIVMTWTLPALVK-SP 297
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ R+ P
Sbjct: 298 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDRRMP 338
>gi|150005250|ref|YP_001299994.1| ribonuclease BN [Bacteroides vulgatus ATCC 8482]
gi|254883717|ref|ZP_05256427.1| ribonuclease BN [Bacteroides sp. 4_3_47FAA]
gi|294777359|ref|ZP_06742811.1| YihY family protein [Bacteroides vulgatus PC510]
gi|319643442|ref|ZP_07998065.1| ribonuclease BN [Bacteroides sp. 3_1_40A]
gi|149933674|gb|ABR40372.1| ribonuclease BN [Bacteroides vulgatus ATCC 8482]
gi|254836510|gb|EET16819.1| ribonuclease BN [Bacteroides sp. 4_3_47FAA]
gi|294448827|gb|EFG17375.1| YihY family protein [Bacteroides vulgatus PC510]
gi|317384847|gb|EFV65803.1| ribonuclease BN [Bacteroides sp. 3_1_40A]
Length = 442
Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 103/269 (38%), Gaps = 8/269 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R I ++ F + AS ++ S LLS+ P + +A G + T
Sbjct: 32 RGILYNAIKIATLSVREFTQGRILNKASALTYSTLLSIIPILAILFAIARGFGFSNLLET 91
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
A+ I I L G+F + + + + + + N +
Sbjct: 92 QFRSGLEG-QSAAAETILGLIDSYLVHAKSGIFIGVGLVMLFWTILSLTYNIERTFNYIW 150
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V + R+ Y F +LL + +V+ S + + + + + F L L+ +
Sbjct: 151 QVKKPRTLYRKMTDYFSILLLLPLLIVLSSGLTIFMSTMVKNMEDFV-LLAPLMKFLVRL 209
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A+F GL F+P K K+ I+PG+I ++ L+ + S Y+
Sbjct: 210 IPFILTWAMFTGLFV---FMPNTKVKLKYAIIPGIIAGT-AFQAFQYLYIGSQIWVSRYN 265
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A+I L++ + + GAEL
Sbjct: 266 AIYGSFAAIPMFLLWAQISWGICLYGAEL 294
>gi|323143392|ref|ZP_08078077.1| putative tRNA-processing ribonuclease BN [Succinatimonas hippei YIT
12066]
gi|322416797|gb|EFY07446.1| putative tRNA-processing ribonuclease BN [Succinatimonas hippei YIT
12066]
Length = 277
Score = 85.7 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 106/274 (38%), Gaps = 10/274 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVV 66
+ ++ + +D + A+ +S + +L++ P + ++ + A + + + V
Sbjct: 1 MKELFKKLLIRVRADDLFIEAAALSYTTILALVPALTVVISIFAMVPAFTPIKQALQNFV 60
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ V ++ I D I + A + + S V A+ +LNR +R +
Sbjct: 61 QNNFMPVFSEAIGDYI-GIFIAHAGQMTVTGTVILFIVSFFLVRAVDKALNRIWRGGKR- 118
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ Y +L ++ + + +AY P L +
Sbjct: 119 ---KMTMTFAVYWMLLTLGPLATGILIWFTSKVIAYSFLDTP----LSFATGLAYFLVPV 171
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ I + + + +P A KI + G +F + + + +F+ +I+ FS Y +Y LA
Sbjct: 172 VVELILVSALFITVPVAVVKIRDAVRGALFVMVLFEICKRIFSAFILNFSDYEAIYGALA 231
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+I ++++ + V + GAE + K
Sbjct: 232 AIPVLMIWININWVIVLFGAEFTVCLSELREEKH 265
>gi|324999564|ref|ZP_08120676.1| tRNA-processing ribonuclease BN [Pseudonocardia sp. P1]
Length = 354
Score = 85.3 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 48/261 (18%), Positives = 98/261 (37%), Gaps = 7/261 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
D + A + E G A+ I+ ++L++ P ++ AGF+ G + + ++ D +
Sbjct: 34 LDHLVRAGARYTENHGDHYAAAITYFSVLALVPLLMVAFAAAGFVLRGNEELLQSLQDGI 93
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A P I + ++ ++ A + I + A Y + LR +L + +
Sbjct: 94 ASAAPGEIGQLLSG-VVDTAIKQAGAIGLIGLVGALYSGIGWMSNLREALTEQWGQRDDA 152
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
I RL L+ ++ SF ++ A LG + + + A +
Sbjct: 153 PPMIKRLAFDLLSLVGLGLALVASFAIASVGGAAGAYLLDLVGLGEVGWARFLLGVAAFL 212
Query: 187 LAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L L ++ ++V LP S + I + + + Y+ T A
Sbjct: 213 LGLAGNWLVFLWVIARLPREPVSFRSAAKAALIGAIGFAILQQVMVVYLGTIGNSPAG-A 271
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
SI+ L+F++ F +
Sbjct: 272 AFGSILGLLIFIFFTSRFLLF 292
>gi|158314310|ref|YP_001506818.1| putative ribonuclease BN [Frankia sp. EAN1pec]
gi|158109715|gb|ABW11912.1| putative ribonuclease BN [Frankia sp. EAN1pec]
Length = 546
Score = 85.3 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 93/263 (35%), Gaps = 21/263 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F E+ G +A+ I+ LS+FP ++ GF+ G V+ +P
Sbjct: 23 VVYKFAEDQGGYLAALIAFYGFLSLFPLLLLLTTGLGFVLAGHPDIQEQVVSSALSQFP- 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSW 128
I D++ + I L + + S AL +L+ + V +
Sbjct: 82 ----IIGDQLRSDVQALRGSAVAVAIGVLGSIWGSLGVARALGNALDTVWAVPRRSRPNP 137
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R+ SFG + L + +V+ + + A L +++ +L
Sbjct: 138 FFARVRSFGLIGLFGLGVVLTTLLSAITTRAGDLGTGLGAGAQVLAVVLGIAGNTGLILM 197
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF--STYSTMYAGLA 246
F L ILPG + W + Y++ + + +Y A
Sbjct: 198 AF-------RLLTVKSVTFGQILPGAAIAALGWQLLQSA-GTYLLQYQLQGRTQVYGLFA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
++ + +LY+L + E+N
Sbjct: 250 LVLGLMTWLYLLAAVIVFAMEIN 272
>gi|291519049|emb|CBK74270.1| Predicted membrane protein [Butyrivibrio fibrisolvens 16/4]
Length = 193
Score = 85.3 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 79/182 (43%), Gaps = 3/182 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
++ ++ A A+ + +++ P ++ +AG++ + ++V+ P
Sbjct: 12 LDKCGRDNIGAYAAQTAYFMIMTSIPVMMLLVWIAGYI--PSIGQYLNELVYNVLPNE-F 68
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
P ++++++ + G +IS L A + S + L + LN+ ++ E R+W R+ +
Sbjct: 69 SPYMAKVIRLVTQASVGAISISVLMAIWASGKAFQNLMVGLNQVNKIEETRNWVARRIRA 128
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
Y L+ + +V++ + V Y ++ L ++ I R + L F
Sbjct: 129 IFYTLVLLMVIVVIMLMLVFTQNLQYYADNYYGFLAYVVGIRPLFRSIFVLSFWLSYLRF 188
Query: 196 VH 197
++
Sbjct: 189 IY 190
>gi|119898109|ref|YP_933322.1| exoribonuclease II [Azoarcus sp. BH72]
gi|119670522|emb|CAL94435.1| exoribonuclease II [Azoarcus sp. BH72]
Length = 306
Score = 85.3 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 96/265 (36%), Gaps = 5/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFG 68
+ A+ ++ + G +M++ ++ A S+ P +V +A F+GA + +
Sbjct: 28 RFVGAALGDWLADGGPSMSAAVAFYAAFSLAPVLVVAIAVASLFVGAEAVQGRLFSGIQA 87
Query: 69 AWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ A + + A + +S ++ L SLN +R E
Sbjct: 88 VVGDEGAVVVQAMVASAWKAGGGGWMGGLSLAGTVIGATATFAELNRSLNIVWRAPENPR 147
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI--YAT 185
+ L V + V + LAY + +L L + G + +
Sbjct: 148 VIASLLRVRLVSFGMVVGTGFLVVVLLIADAGLAYGGRMLLGAMDLDLALVLGLLEQAVS 207
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L I + LP + L G I T + +G LF Y+ T + +
Sbjct: 208 FAFLCIAFSLLLKLLPDVHVPWGAALVGGIATAALFSLGKQLFARYLAYAGTANA-FGAA 266
Query: 246 ASIMTCLVFLYMLGVFFILGAELNA 270
S+ +++L+ F+LGAEL A
Sbjct: 267 GSLAVLMMWLFFSAAVFLLGAELAA 291
>gi|189218115|ref|YP_001938757.1| Ribonuclease BN family enzyme [Methylacidiphilum infernorum V4]
gi|189184973|gb|ACD82158.1| Ribonuclease BN family enzyme [Methylacidiphilum infernorum V4]
Length = 297
Score = 85.3 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 114/281 (40%), Gaps = 12/281 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F++ AI + + + M + +S L S+ P I+ ++A F V I
Sbjct: 2 RFLFNLFKGAIWRWTKHNDSKMGAALSCYILFSIIPLILVLVSVASFFVDPVKVNQEIIF 61
Query: 66 VF-GAWPEVIAKPITD-EILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRV 122
+F E + + +I + +++ + + F +S L+ SLN + +
Sbjct: 62 IFLQILGEESINILKNYQIHASIGFWRNPQTSLTVIFSLVFGASGAFIELQKSLNEIWEI 121
Query: 123 VEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + +SF V L+ + L++ + ++R+F P L +
Sbjct: 122 GPGKEAGLWHVVRKQFLSFFIVFLSGLLLLLFLLLSTTFLETATFIREFSPGLKKYIP-- 179
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G +A++LA F+ ++ LP AK + G F+ + +G L + S
Sbjct: 180 -EGIQFASLLAEFLIFSLLYKILPDAKVYFKDVWFGAAFSTLLIFLGKSLL-WIALRKSA 237
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++Y S++ L++++ F GAEL+ + R
Sbjct: 238 VASIYGAGGSVIMLLLWIFYCSQIFFFGAELSREYALLKAR 278
>gi|94971210|ref|YP_593258.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
gi|94553260|gb|ABF43184.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
Length = 269
Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/260 (18%), Positives = 100/260 (38%), Gaps = 6/260 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWP 71
+D I + E + A ++ +A+LS FPF+V + + Q VI ++ P
Sbjct: 8 WDTIRYMTETEVHTYAFSVAANAILSFFPFVVLMLTICRRAFHSQQMYEVVISLLRDYLP 67
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + ++ LA S S+ L ++LN+ + + + RS+
Sbjct: 68 SNQDFVIKN--MRFLASAHGKAQVFSLAMLLVTSTGIFLPLEVALNKVWGIHKNRSYLAN 125
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+L+S G L + + L V + + I +LA +
Sbjct: 126 QLLSLGLALACGTLAMGSVALTAGNLKMLGVVVGYQNFVARGTSFI--VMKSIAILATML 183
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ LP K +++P I ++ ++ + + +Y A +T
Sbjct: 184 IFFLIYWILPNGKVPWRAVMPAAIIAGAFTEAAKYIYIL-LLPWLDFQAVYGPFAISVTL 242
Query: 252 LVFLYMLGVFFILGAELNAS 271
+++ Y+ G+ + GA L+AS
Sbjct: 243 MIWAYVSGMLLLGGAHLSAS 262
>gi|206577641|ref|YP_002236116.1| putative ribonuclease [Klebsiella pneumoniae 342]
gi|290511906|ref|ZP_06551274.1| ribonuclease [Klebsiella sp. 1_1_55]
gi|206566699|gb|ACI08475.1| putative ribonuclease [Klebsiella pneumoniae 342]
gi|289775696|gb|EFD83696.1| ribonuclease [Klebsiella sp. 1_1_55]
Length = 343
Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ A + + D +
Sbjct: 60 LLRAAERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLAWHPTLLQDIFDKILQN 119
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + L A Y N + LR ++ ++ V E R
Sbjct: 120 VSDPTLAATLKNTINTAVQQRTAVGLVGLLVALYSGINWMGNLREAIRAQSRDVWERRPQ 179
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+I ++ V L+I + A + L N+ + R+
Sbjct: 180 DEEKIWIKYFRDLISLIGLLVALIITLSITSVAGSAQQLIISAL-YLDNIEWLKPAWRLI 238
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + ++ G + I + + ++ T + S
Sbjct: 239 GLAISIFANYLLFFWIFWRLPRHRPRRKALFRGTLIAAIGFEIIKIVMTWTLPALVK-SP 297
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ R+ P
Sbjct: 298 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDRRMP 338
>gi|108798184|ref|YP_638381.1| hypothetical protein Mmcs_1213 [Mycobacterium sp. MCS]
gi|119867280|ref|YP_937232.1| putative ribonuclease [Mycobacterium sp. KMS]
gi|108768603|gb|ABG07325.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693369|gb|ABL90442.1| putative ribonuclease [Mycobacterium sp. KMS]
Length = 339
Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 106/263 (40%), Gaps = 10/263 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD + A E + E G A+ I+ + ++FP ++ G ++AGF+ A Q P VI +
Sbjct: 20 FDHVMRAQERYKESKGDFYAAGITYFTVFALFPLLMLGFSIAGFVLASQ--PDVIAAIAD 77
Query: 69 AWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-E 124
+ ++ + +++ ++ L AA+ + LR +L ++ E
Sbjct: 78 RIRQTVSGDVGRQLVDLMNTAIGSRTSLGIFGLATAAWAGLGWMNNLREALTAMWQQRSE 137
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+++ T+L +L A + +V+ + + + + ++ + W R +
Sbjct: 138 TGNFFGTKLSDLIALLSAFLAIVVTVALTALGDQGVITRLLAWVGIEDIPGLRWGLRAAS 197
Query: 185 TMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++A+ I + LP S + + +++ + + + Y+ T T
Sbjct: 198 LLVAVGISWLLFTWMISRLPRESVSFRSSVRAGLLAAVAFEIFKQVASIYLRTVLTGPAG 257
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF Y+ +
Sbjct: 258 -ATFGPVLGLMVFAYITARLILF 279
>gi|186472434|ref|YP_001859776.1| ribonuclease BN [Burkholderia phymatum STM815]
gi|184194766|gb|ACC72730.1| ribonuclease BN [Burkholderia phymatum STM815]
Length = 311
Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 100/274 (36%), Gaps = 4/274 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ F + G +A I+ ALLS+ P ++ A + + + +
Sbjct: 25 RFALQVIKAFRKNQGLLLAGAIAYYALLSIVPLLILVAIAFSHFVGEKLLLDTLTRLLEW 84
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMR 126
++ I +E+ LA + + + +FSS L +L+ + R
Sbjct: 85 LVPGQSRAIVNELANFLAHRSV-IGWFLVVTMIFFSSLAFTVLENALSIIFVHRVAIRRR 143
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ ++ ++ + + L + +++++ V ++ + F + L +
Sbjct: 144 HFLLSAILPYLFSLSLGIGVLLVTLVSSSLQAVASDSVVLFGHVIPLTGATRVVLYLFGL 203
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L ++L +P ++ + L G + + W + + Y T S S +Y L
Sbjct: 204 AGEIFVLTAIYLVIPVGRTTLRHALFGAVAAAVLWEITRRVLVWYFATLSQVSVVYGSLT 263
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ + L L L + GA+L A K
Sbjct: 264 TAIVVLFSLEALATLMLFGAQLIAEYERLNAAPK 297
>gi|262089775|gb|ACY24868.1| tRNA-processing RNAse [uncultured organism]
Length = 423
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/267 (10%), Positives = 91/267 (34%), Gaps = 8/267 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + + + + + + A+ ++ L + P + + + A Q +
Sbjct: 13 KKYRWLVGFFWLMVHQYQAKSCQKSAASLTYVTLFATVPMMTVTFAMFSIIPAFQNLGEQ 72
Query: 63 ID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++F + + + + + A+ L L + ++ + + N +
Sbjct: 73 LQSLMFQHFLPNSEQDLGKYLKD-FSAQARNLTAFGLLFLLVSAYLMLKDIEQNFNGIWG 131
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R R ++ + A ++L + + + L +
Sbjct: 132 VPRGR-----RGVANFLLYWAILSLGPLLLGAALGISTYLASFRLLVGTYDSLGVFEWVF 186
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A + + + + +P K + + G +FT + + F + S+++ +
Sbjct: 187 QLAPWVLTWAAFTLLFVAVPNCKVSVRHAMIGGLFTTLGFQGLKAAFGWIVGH-SSFTLV 245
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A++ L+++ ++ + GA
Sbjct: 246 YGAFAALPLFLLWVNLIWTVILGGAVF 272
>gi|300857884|ref|YP_003782867.1| hypothetical protein cpfrc_00467 [Corynebacterium
pseudotuberculosis FRC41]
gi|300685338|gb|ADK28260.1| putative membrane protein [Corynebacterium pseudotuberculosis
FRC41]
Length = 361
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 94/267 (35%), Gaps = 12/267 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
FD I E + EE G ++ I+ ++LS+FP ++ +A P ++
Sbjct: 38 WSWFDHIMRMNERYGEEGGNQYSAGITYFSVLSMFPLLMLIMAIAA--SMLAQRPDLLAQ 95
Query: 66 VFGAWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRA--Y 120
+ + I + + ++L +F I L A + + LR ++ Y
Sbjct: 96 LQEKIVASVDGSIAETLTKILDTAIAQRGAMFGIGGLTALWSGLGWMSNLRYGASKMWCY 155
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA---YVRKFFPALGNLLLII 177
V +++ +L ++ ++ V L V + + L+
Sbjct: 156 PVT-GENFFKAKLQDLLGLVGLIFAFMVAFGVTAIGSSGLTERLLVVVSLDKVPGIFLLT 214
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ I ++A F +++ +LP + + S + I + + V L +
Sbjct: 215 FAVSILLGLIANFCVFLWMLKYLPRGEVPMKSAVRASIIGAVLFEVFKQLAAQFFSNALN 274
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ A I+ +V Y + +
Sbjct: 275 -NPAGATFGPIIGVMVLFYFVWRILMY 300
>gi|330822853|ref|YP_004386156.1| ribonuclease BN [Alicycliphilus denitrificans K601]
gi|329308225|gb|AEB82640.1| ribonuclease BN [Alicycliphilus denitrificans K601]
Length = 299
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 107/265 (40%), Gaps = 14/265 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAW 70
+ A++ +++ +G M++ +S +LS+ P ++ + G+ ++ + +I V G
Sbjct: 18 LLRAVQLWLDAEGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWVDKAYLESSLIAQVQGVM 77
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAY----RVVEM 125
E A+ + + A L +I+ + GV A L+ +L R + E
Sbjct: 78 GERGAEVVRMALASAKAPAQGWLASIAGFVLLLSGATGVFAELQSALARLWVHGRAAPER 137
Query: 126 RSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GR 181
+ W+ RL YVL L+I + AI + + P +LL N
Sbjct: 138 KPWWHMASLRLRGLAYVLAIGFLLLISLVLSTAIKVLATWAGALLPFGAGVLLQFANEAV 197
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+A + LF+GL+ K + ++ G + G L Y+ T + +
Sbjct: 198 AFAVAVLLFVGLM---RIGSGPKPPLSCLVLGAAVGAALFTAGKQLLAWYLST-AAVVSA 253
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
Y S++ L+++Y + GA
Sbjct: 254 YGAAGSLVVLLMWIYFSSAVLLFGA 278
>gi|152972381|ref|YP_001337527.1| hypothetical protein KPN_03873 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262040578|ref|ZP_06013818.1| inner membrane protein YhjD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330001450|ref|ZP_08304011.1| putative ribonuclease [Klebsiella sp. MS 92-3]
gi|150957230|gb|ABR79260.1| hypothetical protein KPN_03873 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259042070|gb|EEW43101.1| inner membrane protein YhjD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328537651|gb|EGF63865.1| putative ribonuclease [Klebsiella sp. MS 92-3]
Length = 343
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ A + + D +
Sbjct: 60 LLRAAERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLAWHPTLLQDIFDKILQN 119
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + L A Y N + LR ++ ++ V E R
Sbjct: 120 VSDPTLAATLKNTINTAVQQRTAVGLVGLLVALYSGINWMGNLREAIRAQSRDVWERRPQ 179
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
++ ++ V L+I + A + L N+ + R+
Sbjct: 180 DEEKIWVKYFRDLISLIGLLVALIITLSITSVAGSAQQMIISAL-YLDNIEWLKPAWRLI 238
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + ++ G + I + + ++ T + S
Sbjct: 239 GLAISIFANYLLFFWIFWRLPRHRPRRKALFRGTLIAAIGFEIIKIVMTWTLPALVK-SP 297
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ R+ P
Sbjct: 298 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDRRMP 338
>gi|323357076|ref|YP_004223472.1| hypothetical protein MTES_0628 [Microbacterium testaceum StLB037]
gi|323273447|dbj|BAJ73592.1| predicted membrane protein [Microbacterium testaceum StLB037]
Length = 399
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 102/265 (38%), Gaps = 13/265 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGAWP 71
HF++ +G+ +A+ +S L +VF + G G+ + +I ++ P
Sbjct: 53 RVWRHFLQHNGFLLAAGMSYQGLFAVFSALYLSFAAVGIWLGGSKAAIDGLIGIINSYIP 112
Query: 72 EVIAK--PITDEILQVLAVPAKGLFTISA----LAAAYFSSNGVEALRISLNRAYRVV-E 124
+I+K + + ++ +A + L I+ + + + V R ++ + + +
Sbjct: 113 GLISKNGLVQPDKVEAVAQESGKLLGITGAIAAIVVIWTAIGFVTFTRRAVRDTFGLPFD 172
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
MR++ + + F LL + L++ + + A+ V R +
Sbjct: 173 MRNYVLLKARDFVASLLFGLALLVGALLGSITTGAVDLVFGILGWDRETPGWTIGARAVS 232
Query: 185 TMLAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++A + L + FL PG + VV + +V T + +
Sbjct: 233 ALVAFGVNTVALASLFRFLTGTTLTWRRAWPGALVGAGGMVVLQIGAGFLLVYTPT-NPL 291
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A+++ L++ +G+ ++ A
Sbjct: 292 LGTFAALIGFLLWFRFIGIVILVSA 316
>gi|288933112|ref|YP_003437171.1| ribonuclease [Klebsiella variicola At-22]
gi|288887841|gb|ADC56159.1| ribonuclease [Klebsiella variicola At-22]
Length = 343
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ A + + D +
Sbjct: 60 LIRAAERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLAWHPTLLQDIFDKILQN 119
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + L A Y N + LR ++ ++ V E R
Sbjct: 120 VSDPTLAATLKNTINTAVQQRTAVGLVGLLVALYSGINWMGNLREAIRAQSRDVWERRPQ 179
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+I ++ V L+I + A + L N+ + R+
Sbjct: 180 DEEKIWIKYFRDLISLIGLLVALIITLSITSVAGSAQQLIISAL-YLDNIEWLKPAWRLI 238
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + ++ G + I + + ++ T + S
Sbjct: 239 GLAISIFANYLLFFWIFWRLPRHRPRRKALFRGTLIAAIGFEIIKIVMTWTLPALVK-SP 297
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ R+ P
Sbjct: 298 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDRRMP 338
>gi|254516314|ref|ZP_05128373.1| ribonuclease BN [gamma proteobacterium NOR5-3]
gi|219674737|gb|EED31104.1| ribonuclease BN [gamma proteobacterium NOR5-3]
Length = 298
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 111/274 (40%), Gaps = 12/274 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
++ + ++ ++++ F+ ED A+ +S + + S+ ++ +A G
Sbjct: 3 KKTLTFYWQVLTESLDRFLAEDMPTHAAALSYNMIFSLPSMLLIVLWVAAVFYGEAAVSN 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + E A+ I + ++ + P+ I+ L YF++ LR +LN
Sbjct: 63 AIFAELGSLVGESGAQQIMATLDELHIHEPSWEASAIAILVLLYFATTVYHVLRKALNHL 122
Query: 120 YRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFV--AIPLALAYVRKFFPALGN 172
+V S W + R+ LL+ V+ +++ F+ + + +Y+ F L
Sbjct: 123 AQVKAPASLHLSIWRLLRIRIIAVALLSIVSFLMVIFLMLDALVVKVDSYLAGFSGPLAA 182
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L ++ + A I +LP + G + T ++ G L + I
Sbjct: 183 YLDMV--DAYVLNLCATTILFALYIRYLPDVRLAWRDTWFGALLTAFLYLQGKALISLVI 240
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ S +++Y SI+ ++++Y F+ GA
Sbjct: 241 GS-SEAASVYDAAGSILVLMLWVYYAAAIFLFGA 273
>gi|194336683|ref|YP_002018477.1| ribonuclease BN [Pelodictyon phaeoclathratiforme BU-1]
gi|288559222|sp|B4SAH4|Y1623_PELPB RecName: Full=UPF0761 membrane protein Ppha_1623
gi|194309160|gb|ACF43860.1| ribonuclease BN [Pelodictyon phaeoclathratiforme BU-1]
Length = 428
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 94/255 (36%), Gaps = 9/255 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
++F+ + + A ++ LLS+ P + ++ F+ F ++ D + +
Sbjct: 31 FWKNFIHDRIFLGAGSLAFQTLLSIVPILAVILSILNVFVVFTPFKRSLEDFLVQNFMPG 90
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + A + + + + + + +LN + V R
Sbjct: 91 AGNVLNHYLTDFIGKTAS-VPILGGVFLFIIALFLISTVDHTLNEIWEVHAPRKALQ--- 146
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
G+ L +V L + + + A +YV G LL + + +
Sbjct: 147 ---GFTLYWTV-LTLGPVLIGSSLAASSYVWYMVFTDGPLLELKTRLLSFFPFINSVAAF 202
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P + + + G + + + + FT YI +T+ +Y L+ I
Sbjct: 203 FLLYMLVPNRRVRFVHAFSGALLAALLFELSKRWFTFYITHIATFEHIYGALSVIPMLFF 262
Query: 254 FLYMLGVFFILGAEL 268
++Y+ + + GAE
Sbjct: 263 WVYLGWIVVLTGAEF 277
>gi|300932896|ref|ZP_07148152.1| ribonuclease, putative [Corynebacterium resistens DSM 45100]
Length = 330
Score = 84.9 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 109/269 (40%), Gaps = 16/269 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
FD + E + E+ G A+ I+ ++LS+FP ++ ++ + G + + V+
Sbjct: 36 WPWFDHVMRMQERYSEQGGNQFAAGITYFSVLSLFPILMLVFSIVAMVLAGDQELLNRVV 95
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D V + +++ +++ I Q + +F+I L A + + LR+ + ++V
Sbjct: 96 DKVSQSGGGKMSETLSEVIHQAVD-QRGSVFSIGLLLALWTGLGWMAHLRMGASAMWKVS 154
Query: 124 -EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY---VRKFFPALGNLLLIIWN 179
+S+ ++ F ++ V +I + L + + ++ +
Sbjct: 155 GSAKSFLSGKIKDFIGLIGLLVAFIIAFAITAIGNSGLTMRILETLHLEQVPGIRILTFA 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW----VVGAVLFTHYIVTF 235
+ ++A ++ +++ +LP K+ S+ I +++ + F++ +
Sbjct: 215 VALVVALIANYLVFVWLIAYLPRTKTDRPSVFRAAIIGAVAFEVFKQFATIFFSNALSNP 274
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ A I+ +V +Y + +
Sbjct: 275 AG-----AAFGPIIGIMVLMYFVWRIVLY 298
>gi|319794326|ref|YP_004155966.1| ribonuclease bn [Variovorax paradoxus EPS]
gi|315596789|gb|ADU37855.1| ribonuclease BN [Variovorax paradoxus EPS]
Length = 307
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 103/276 (37%), Gaps = 12/276 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
M +FD+ A + + +M + ++ + S+ P ++ +AG G
Sbjct: 1 MLMQIRALFDLCKRAFASWSNDYAPSMGAALAYYTVFSIAPLLLIVIAVAGLVFGQEAAR 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNR 118
+ + G A + + V + T+ + ++ L+ +L+R
Sbjct: 61 GEIFAQLSGLMGAQGAAAVQGMLQAVNKPTEGIVATVIGIGLLVVGATTVFGELQDALDR 120
Query: 119 AYRVVEMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+R + RL+SF ++ L++ A+ + F A +
Sbjct: 121 IWRAPARTKSSGIFNLLRVRLLSFSMIMGIGFLLMVSLVASAALAALGKWWSPMFGAWES 180
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L ++ + + + ++ +P AK + + G T + + VG L YI
Sbjct: 181 LAQVVN---FVFSFAMVTVIFAMIYKIMPRAKVQWRDVWVGAAVTALLFTVGKHLIGLYI 237
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S+ ++ Y S++ LV++Y F+LGAE
Sbjct: 238 GK-SSVASGYGAAGSLVVVLVWVYYSAQIFLLGAEF 272
>gi|254372164|ref|ZP_04987656.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569894|gb|EDN35548.1| tRNA processing ribonuclease BN [Francisella novicida GA99-3549]
Length = 398
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 105/268 (39%), Gaps = 10/268 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVP 60
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ A
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPVFFIIINILNAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +F A + I + + L S + ++ L I+LN+ +
Sbjct: 68 NLQNFLFENMLPATATTVQQYITNI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R + L+ Y L ++ ++M FVF++ ++ + +
Sbjct: 127 YANKQRPMIQSLLV---YWALMTMGPLLMGFVFISSTYLISMA-----WFVKDIGMEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G V+ LP + L I + + +F Y+ TYS
Sbjct: 179 LSSLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFSIAKKIFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L+ I ++++++ +LGA +
Sbjct: 239 IYGSLSLIPIFILWVFVTWQITLLGAVM 266
>gi|134095695|ref|YP_001100770.1| ribonuclease [Herminiimonas arsenicoxydans]
gi|133739598|emb|CAL62649.1| Putative ribonuclease BN [Herminiimonas arsenicoxydans]
Length = 313
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 97/267 (36%), Gaps = 5/267 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVID 64
+ ++ ++ + + G + + ++ L S+ P ++ +AG GA +
Sbjct: 15 RRIRIVVVCSMMEWFAQRGGSKGAAVAFYTLFSMAPILILAIAIAGAVFGAQAARGEIFA 74
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ G A+ I + I+ + ++ L+ SL+ + V
Sbjct: 75 QLSGLVGPNGAQAIEMLLANAHNPHTGVTATLIATIILLVGATTIFAELKDSLDEIWHVP 134
Query: 124 EMR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R S ++ L + L + V + I ALA + +++ L I
Sbjct: 135 KARESGWLEVLRVRLLSFGLVLVLAFLLLVSLIISAALALLERYWGGLWQDASFILTPAS 194
Query: 183 -YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + ++ LP K + G + T ++ G L Y+ S ++
Sbjct: 195 NIISYLVIACLFAVIYKTLPQVKLSWHDVAIGSLGTAALFIFGKYLIGVYLGN-SGVASS 253
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y S++ L+++Y F LGA
Sbjct: 254 YGAAGSLVALLLWVYYSAQIFFLGASF 280
>gi|302205611|gb|ADL09953.1| Putative ribonuclease, membrane protein [Corynebacterium
pseudotuberculosis C231]
gi|302330164|gb|ADL20358.1| ribonuclease [Corynebacterium pseudotuberculosis 1002]
gi|308275847|gb|ADO25746.1| ribonuclease [Corynebacterium pseudotuberculosis I19]
Length = 361
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 94/267 (35%), Gaps = 12/267 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
FD I E + +E G ++ I+ ++LS+FP ++ +A P ++
Sbjct: 38 WSWFDHIMRMNERYGKEGGNQYSAGITYFSVLSMFPLLMLIMAIAA--SMLAQRPDLLAQ 95
Query: 66 VFGAWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRA--Y 120
+ + I + + ++L +F I L A + + LR ++ Y
Sbjct: 96 LQEKIVASVDGSIAETLTKILDTAIAQRGAMFGIGGLTALWSGLGWMSNLRYGASKMWCY 155
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA---YVRKFFPALGNLLLII 177
V +++ +L ++ ++ V L V + + L+
Sbjct: 156 PVT-GENFFKAKLQDLLGLVGLIFAFMVAFGVTAIGSSGLTERLLVVVSLDKVPGIFLLT 214
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ I ++A F +++ +LP + + S + I + + V L +
Sbjct: 215 FAVSILLGLIANFCVFLWMLKYLPRGEVPMKSAVRASIIGAVLFEVFKQLAAQFFSNALN 274
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ A I+ +V Y + +
Sbjct: 275 -NPAGATFGPIIGVMVLFYFVWRILMY 300
>gi|117928861|ref|YP_873412.1| ribonuclease BN [Acidothermus cellulolyticus 11B]
gi|117649324|gb|ABK53426.1| ribonuclease BN [Acidothermus cellulolyticus 11B]
Length = 345
Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 100/279 (35%), Gaps = 24/279 (8%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + + + F ++ A ++ ++FP ++ + G+L G +++
Sbjct: 20 LLGVPFATVRKFGDDQAGTQAVLLAYYGFFALFPLLLLLTTILGWLLPGHPGLQNRILNS 79
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGV-EALRISLNRAYRV- 122
+P I ++ + L I +A + + GV +A + ++N + V
Sbjct: 80 ALANFP-----IIGTQLRGDVHALRGNLLAVIVGIAGLLYGAQGVGQAAQSAMNTVWNVP 134
Query: 123 -VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ +++ RL + ++ + + +I + V + FP + W
Sbjct: 135 FRDRPNFFSRRLRGYAWLAVLGLATLISTVVAGFG-------AQVFPG-----ALGWLWS 182
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L AA + + GV+ + W + Y+ +++
Sbjct: 183 QSVPFAINLGVFTVIFRVLVAAPLRWRDVRIGVLLAAVFWQGLQIGGGFYVSRTLNHASD 242
Query: 242 -YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y A ++ L +LY+ + AE+N + W +
Sbjct: 243 VYGFFAIVIGLLSWLYLAAELTLFAAEVNVVIRDRLWPR 281
>gi|56707375|ref|YP_169271.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669845|ref|YP_666402.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis FSC198]
gi|134302683|ref|YP_001122651.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187932228|ref|YP_001892213.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224456443|ref|ZP_03664916.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254368406|ref|ZP_04984423.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica FSC022]
gi|254370924|ref|ZP_04986929.1| BN family tRNA processing ribonuclease [Francisella tularensis
subsp. tularensis FSC033]
gi|254874209|ref|ZP_05246919.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56603867|emb|CAG44846.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320178|emb|CAL08229.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis FSC198]
gi|134050460|gb|ABO47531.1| ribonuclease BN-like family protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151569167|gb|EDN34821.1| BN family tRNA processing ribonuclease [Francisella tularensis
subsp. tularensis FSC033]
gi|157121300|gb|EDO65501.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica FSC022]
gi|187713137|gb|ACD31434.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254840208|gb|EET18644.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158507|gb|ADA77898.1| ribonuclease BN-like family protein [Francisella tularensis subsp.
tularensis NE061598]
Length = 395
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 105/267 (39%), Gaps = 11/267 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ +
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFS--SLSES 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 66 LQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIFY 124
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + L+ Y L ++ ++M FVF++ ++ + +
Sbjct: 125 ANRQRPILQSLLV---YWALMTMGPLLMGFVFISSTYLISMA-----WFVKDIGMEQYLL 176
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++ L G V+ LP + L I + + +F Y+ TYS +
Sbjct: 177 SGLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSVI 236
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y L+ I ++++++ +LGA +
Sbjct: 237 YGSLSLIPIFILWVFVTWQITLLGAVM 263
>gi|301057210|ref|ZP_07198339.1| YihY family protein [delta proteobacterium NaphS2]
gi|300448661|gb|EFK12297.1| YihY family protein [delta proteobacterium NaphS2]
Length = 450
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/299 (14%), Positives = 95/299 (31%), Gaps = 41/299 (13%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
I +++ A ++L+ +L++ P + G + +G + +
Sbjct: 45 LKIFSIVFLKMLQDAVTFRARGLTLTVVLAMAPMLALGTAILKGIGVSEETQDLAHRFLD 104
Query: 69 -------------------------AWPEVIAKP-------------ITDEILQVLAVPA 90
P A + D+I +
Sbjct: 105 QIVISSASQAGPETDPEDDLKPETALLPHSAADVKGSGQNLVIHLRGMVDKIFGYINRTD 164
Query: 91 KGLFTISALAAAYFSSNGVEA-LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
AA A L S+N + V + RS + ++L + + +
Sbjct: 165 FATLGFVGTAAILALVASFLAHLETSMNTIWEVKKGRSAWKRARNYLAVLILLPIAMNLG 224
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS 209
+ + + L ++ L + ++ FLP +
Sbjct: 225 FAAMAVLQS--STLMAKLEDLLPSPWMVAFLLKMFPALVIAGAFAALYQFLPNTNVSVFH 282
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ G ISW++ +L+ + + + Y+ +Y A++ L+++YM V F++GAEL
Sbjct: 283 SISGGFLAGISWLLVLLLYINLQLGVARYNAIYGSFATLPLVLLWIYMGWVIFLIGAEL 341
>gi|328676261|gb|AEB27131.1| Ribonuclease BN [Francisella cf. novicida Fx1]
Length = 398
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 106/268 (39%), Gaps = 10/268 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVP 60
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ A
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 68 SLQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + L+ Y L ++ ++M FVF++ ++ + +
Sbjct: 127 YANRQRPILQSLLV---YWALMTMGPLLMGFVFISSTYLISMA-----WFVKDIGMEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G V+ LP + L I + + +F Y+ TYS
Sbjct: 179 LSGLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L+ I ++++++ +LGA +
Sbjct: 239 IYGSLSLIPIFILWVFVTWQITLLGAVM 266
>gi|88807156|ref|ZP_01122668.1| hypothetical protein WH7805_11433 [Synechococcus sp. WH 7805]
gi|88788370|gb|EAR19525.1| hypothetical protein WH7805_11433 [Synechococcus sp. WH 7805]
Length = 310
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/297 (15%), Positives = 110/297 (37%), Gaps = 21/297 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
R + ++ A + + D +++ + L S+FP ++ +LA FL
Sbjct: 4 RLLLRRIVRSLWLAYQRWAGSDCIDLSAAFAYYTLQSIFPILLISLSLASFLLGRQDNLD 63
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I GA P + + Q++ G + A + N L+ +R
Sbjct: 64 QQIIFYASGALPPPAVSIVRQTLNQLV-QQGFGAGLLGAAVLLITAGNVYLTLQRGADRL 122
Query: 120 YR-----VVEMRSW-------YITRLISFGYVLLASVTLV---IMSFVFVAIPLALAYVR 164
+R + E + R+ +F V+L + +V I + + + +
Sbjct: 123 WRDVLRPLPESMPFGAQAFQFVRVRIEAFFIVILIGLLIVADQISVNLRMIPAGVVQDFQ 182
Query: 165 KFFPALGNLLL---IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+ P LG+ L ++ GR+ + + + + LP+ + + ++PG +
Sbjct: 183 QSLPWLGDFLDALPLLQVGRVLFSFVGFSSMALLLQALLPSRRVPFIPLIPGSLLIGFLL 242
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + I++ Y + ++ +++YM+GV G + + + +
Sbjct: 243 TTLNLAVSRSILSLGARFQAYGVIGGVLVLTLWVYMVGVVIYFGQCWSVELALMRQK 299
>gi|118496801|ref|YP_897851.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
novicida U112]
gi|194324518|ref|ZP_03058290.1| putative ribonuclease BN-like family protein [Francisella
tularensis subsp. novicida FTE]
gi|208780585|ref|ZP_03247924.1| tRNA processing ribonuclease BN [Francisella novicida FTG]
gi|118422707|gb|ABK89097.1| tRNA processing ribonuclease BN [Francisella novicida U112]
gi|194321353|gb|EDX18839.1| putative ribonuclease BN-like family protein [Francisella
tularensis subsp. novicida FTE]
gi|208743560|gb|EDZ89865.1| tRNA processing ribonuclease BN [Francisella novicida FTG]
Length = 398
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 106/268 (39%), Gaps = 10/268 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVP 60
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ A
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 68 SLQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + L+ Y L ++ ++M FVF++ ++ + +
Sbjct: 127 YANRQRPILQSLLV---YWALMTMGPLLMGFVFISSTYLISMA-----WFVKDIGMEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G V+ LP + L I + + +F Y+ TYS
Sbjct: 179 LSGLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L+ I ++++++ +LGA +
Sbjct: 239 IYGSLSLIPIFILWVFVTWQITLLGAVM 266
>gi|237786124|ref|YP_002906829.1| hypothetical protein ckrop_1558 [Corynebacterium kroppenstedtii DSM
44385]
gi|237759036|gb|ACR18286.1| putative membrane protein [Corynebacterium kroppenstedtii DSM
44385]
Length = 371
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/262 (14%), Positives = 95/262 (36%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
D + + + E+ G A+ I+ ++LS+ P ++ GF+ G + V +
Sbjct: 42 LDHLMRMQDRYSEQGGNHFAAGITYFSVLSLIPIMLIVFAGFGFVLAGNDAAMDKVEQQI 101
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + ++ + I L A + + LR+ ++ ++V
Sbjct: 102 LDLGTSGLKDTLQ-TLVDTAVERRSSIGVIGLLTALWTGLGWMGNLRLGVSEMWKVKITP 160
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGRI 182
++ +L ++ V V V +L + L + + + W
Sbjct: 161 DNFVKGKLSDLIGLIGLLVAFVAAFVVTAIGSSSLTKKFLEYIELDSVPGIHFVTWLVAF 220
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+LA +I +++ FLP K S+L I +++ + F ++ + +
Sbjct: 221 IVGLLANYIVFVWLLKFLPREKVPWKSVLQAAIIGAVAFELIKQ-FGAVFISATMNNPAA 279
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A ++ +V Y++ +
Sbjct: 280 AAFGPVIAIMVLFYLIWRVVLY 301
>gi|161869450|ref|YP_001598617.1| ribonuclease BN/unknown domain fusion protein [Neisseria
meningitidis 053442]
gi|161595003|gb|ABX72663.1| ribonuclease BN [Neisseria meningitidis 053442]
Length = 371
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 80/219 (36%), Gaps = 9/219 (4%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVP 89
++ + LL++ P + +A ++ + + V A + D I
Sbjct: 1 MTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYI-NAFREQ 59
Query: 90 AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
A L I ++ S + + + NR +RV R W + L+ + + ++L +
Sbjct: 60 ANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGV- 118
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS 209
F+ + A + P L R AT+ + + L ++ F+P
Sbjct: 119 GISFMVGSVQDAALASGAPQWSGAL------RTAATLTFMTLLLWGLYRFVPNRFVPARQ 172
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
G + T LFT Y+ F Y ++Y A++
Sbjct: 173 AFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFAAV 211
>gi|254373645|ref|ZP_04989129.1| tRNA processing ribonuclease BN [Francisella novicida GA99-3548]
gi|151571367|gb|EDN37021.1| tRNA processing ribonuclease BN [Francisella novicida GA99-3548]
Length = 398
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 106/268 (39%), Gaps = 10/268 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVP 60
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ A
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 68 SLQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + L+ Y L ++ ++M FVF++ ++ + +
Sbjct: 127 YANRQRPMLQSLLV---YWALMTMGPLLMGFVFISSTYLISMA-----WFVKDIGMEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G V+ LP + L I + + +F Y+ TYS
Sbjct: 179 LSGLSLIFLTTGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L+ I ++++++ +LGA +
Sbjct: 239 IYGSLSLIPIFILWVFVTWQITLLGAVM 266
>gi|226365710|ref|YP_002783493.1| ribonuclease [Rhodococcus opacus B4]
gi|226244200|dbj|BAH54548.1| putative ribonuclease [Rhodococcus opacus B4]
Length = 340
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 96/262 (36%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
FD + A + + + G A+ I+ ++L++ P ++ +AGF+ G + + + D +
Sbjct: 18 FDHLMRAAQRYQNQKGDYYAAGITYFSVLALIPILMVAFAIAGFVLAGQPELLQELQDGI 77
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-VVEM 125
P + + I +A + + L AAY + LR +L + E
Sbjct: 78 TKNVPGSLGDTLNTIIDSAIA-SRASVGVLGLLGAAYAGLGWMANLRDALTAMWESQRES 136
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + T+L +L + +++ +A L ++ + R +T
Sbjct: 137 KGFVRTKLGDAVALLGLGLAMIVSIGSSALSSGPVARTVVEVLNLDDVTGVDIGLRALST 196
Query: 186 MLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L+L LP S + + + + + + Y+ +
Sbjct: 197 VLSLVATWAVFAWVIARLPREPVTFRSAIKAALLAAVVFEIFKQVGAIYLTAVTAGPAGV 256
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A I+ LVF+Y+ +
Sbjct: 257 A-FGPIIGLLVFIYLTSRMLLF 277
>gi|89257180|ref|YP_514542.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica LVS]
gi|115315516|ref|YP_764239.1| BN family tRNA processing ribonuclease [Francisella tularensis
subsp. holarctica OSU18]
gi|156503417|ref|YP_001429482.1| YihY family membrane protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010954|ref|ZP_02275885.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica FSC200]
gi|254366898|ref|ZP_04982935.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica 257]
gi|290953259|ref|ZP_06557880.1| YihY family membrane protein [Francisella tularensis subsp.
holarctica URFT1]
gi|295313524|ref|ZP_06804118.1| YihY family membrane protein [Francisella tularensis subsp.
holarctica URFT1]
gi|89145011|emb|CAJ80380.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica LVS]
gi|115130415|gb|ABI83602.1| BN family tRNA processing ribonuclease [Francisella tularensis
subsp. holarctica OSU18]
gi|134252725|gb|EBA51819.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica 257]
gi|156254020|gb|ABU62526.1| YihY family membrane protein [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 395
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 105/267 (39%), Gaps = 11/267 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ +
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFS--SLSES 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 66 LQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIFY 124
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + L+ Y L ++ ++M FVF++ ++ + +
Sbjct: 125 ANRQRPILQSLLV---YWALMTMGPLLMGFVFISSTYLISMA-----WFVKDIGMEQYLL 176
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++ L G V+ LP + L I + + +F Y+ TYS +
Sbjct: 177 SGLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSVI 236
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y L+ I ++++++ +LGA +
Sbjct: 237 YGSLSLIPIFILWVFVTWQITLLGAVM 263
>gi|76800751|ref|YP_325759.1| hypothetical protein NP0192A [Natronomonas pharaonis DSM 2160]
gi|76556616|emb|CAI48187.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
Length = 435
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 91/281 (32%), Gaps = 12/281 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + ++ + +A+ ++ L+S+ P +V A +G Q +
Sbjct: 1 MKRHVDRTVAVTRGVVDGARSDRITFLAASLAYYGLVSLVPLLVLALVAASVVGEGQLIE 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ V A E + D + A G + + L I+ + Y
Sbjct: 61 ALVVAVGDALGEQAGDVLGDALTG--AAGRGGATLLGLAVFLWSGLKLFRGLDIAFSEVY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
S + + + + + A + + +
Sbjct: 119 GTAGPES---------LLSGIRNAVVTLGAVGLGVTATVAAGAAIAVLGVDAAVEGVALV 169
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+AL + + ++ FLP + +PG F I W F Y Y+
Sbjct: 170 GTLGLFVALTVAFLPLYYFLPGTDVSLSEAVPGAAFAAIGWTALQTGFRIYAGATDAYAA 229
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y L ++ + FLY+ + +LGA LNA + P
Sbjct: 230 -YGILGGVLLLVTFLYLGALVLLLGAVLNAVLAGRSPPSDP 269
>gi|156936315|ref|YP_001440231.1| hypothetical protein ESA_04215 [Cronobacter sakazakii ATCC BAA-894]
gi|156534569|gb|ABU79395.1| hypothetical protein ESA_04215 [Cronobacter sakazakii ATCC BAA-894]
Length = 344
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 95/264 (35%), Gaps = 12/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F E G + I+ + LS+ P ++ +AGF+ + + + + +
Sbjct: 60 LLRAFERFNERMGNQFGAAITYFSFLSMIPVLMVSFAVAGFVLASHPTLLQDIFNKILQS 119
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ +R R
Sbjct: 120 VSDPTLAKTLSSSINAAVEQRTTVGIVGFAVALYSGVNWMGYLREAIRAQFRDDWERGAE 179
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+++ L F ++ V LVI + A + + A+G L +
Sbjct: 180 DDKEKFWVKYLRDFISLIGLLVALVITMSITSVAGSAQETIIRLLHLDAIGWLKPVWHLI 239
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + A ++ ++ LP + + ++L G + I + V ++ T+ + + S
Sbjct: 240 GLAVSFCANYLLFFWIFWRLPRHRPRRKALLRGTVIAAIGFEVIKIIMTYTLPSLVK-SP 298
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
A S++ + F Y +
Sbjct: 299 SGAAFGSVLGLMAFFYFFARLTLF 322
>gi|297171232|gb|ADI22240.1| predicted membrane protein [uncultured Gemmatimonadales bacterium
HF0200_34B24]
Length = 228
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 77/220 (35%), Gaps = 9/220 (4%)
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 8 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 66
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R Y ++ + + LA++ +L +I N
Sbjct: 67 RSKRARPKI--------YSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNV 118
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 119 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 178
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 179 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 218
>gi|255323935|ref|ZP_05365061.1| YihY family protein [Corynebacterium tuberculostearicum SK141]
gi|255299115|gb|EET78406.1| YihY family protein [Corynebacterium tuberculostearicum SK141]
Length = 359
Score = 84.1 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 100/266 (37%), Gaps = 17/266 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D + E + E G A+ I+ ++LS+FP + + A++ +++ +
Sbjct: 39 DHLMRMNERYGAEGGNQFAAGITYYSVLSIFPLAMLVVATVAAVLANR--EDLLNDLQSH 96
Query: 70 WPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--E 124
I + D + ++L +F I L + + LRI ++ + + E
Sbjct: 97 ITSSIDGDMGDTVNEILDTAIDQRGAMFGIGGLTTLWSGLGWMNNLRIGISAMWGIDANE 156
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL------AYVRKFFPALGNLLLIIW 178
S+ +L ++ V +I V A L + FP + +++ +
Sbjct: 157 GGSFLKKKLSDLVGLIGLIVAFLIAFGVTAAGSSGLTQKIFERVGIESFPGMDSVIFFVG 216
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
L + LI + LP K S L G +++ + L + I++ +T
Sbjct: 217 LAVGLLANLIVMWWLIMI---LPRTKVPKKSGLIGAAIGAVAFELLKQL-STLIMSSATG 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFIL 264
S A ++ +V +Y++ +
Sbjct: 273 SPAGAVFGPVIVLMVVMYLIWRVVLY 298
>gi|134103022|ref|YP_001108683.1| tRNA-processing ribonuclease BN [Saccharopolyspora erythraea NRRL
2338]
gi|291005222|ref|ZP_06563195.1| tRNA-processing ribonuclease BN [Saccharopolyspora erythraea NRRL
2338]
gi|133915645|emb|CAM05758.1| possible tRNA-processing ribonuclease BN [Saccharopolyspora
erythraea NRRL 2338]
Length = 338
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 104/261 (39%), Gaps = 6/261 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
D + A + + G A+ I+ ++L++ P ++ +AGF+ G + + + +
Sbjct: 21 LDRLIRAANRYQSQYGDYYAAAITYFSVLALVPLLMIAFAIAGFVLGGNPDLLAQLRNSI 80
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A P + + ++ A + I +AA Y + + LR +L + +
Sbjct: 81 TTAVPNPAMSQMLNNVVDQAIGQAGAVGIIGLVAALYSGLSWMTNLREALTALWTQEPEQ 140
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + +S L+ + +SF A+ + + + + ++ AT+
Sbjct: 141 QPVLRKYVSDLLSLIGLGLAMGISFGISAVGGGVGRMLLELAGIDDTPFARAGLQVLATL 200
Query: 187 LAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L+L ++ +++ LP + S + G +F + + + + Y+ + + A
Sbjct: 201 LSLAASWLVFLWILARLPRKPVSLRSAVWGALFGAVGFEILKQVGVFYLNSVTGSPAA-A 259
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
I+ LVF Y+ F +
Sbjct: 260 AFGPILGLLVFSYLTSRFILF 280
>gi|148240533|ref|YP_001225920.1| ribonuclease BN-like family protein [Synechococcus sp. WH 7803]
gi|147849072|emb|CAK24623.1| Ribonuclease BN-like family protein [Synechococcus sp. WH 7803]
Length = 310
Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 110/298 (36%), Gaps = 23/298 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
R + ++ A + + D +++ + L S+FP ++ +LA FL
Sbjct: 4 RLLLRRIVRSLWLAYQRWAGTDCVDLSAAFAYYTLQSIFPILLISLSLASFLLGRQDNLD 63
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I G P + ++Q++ G + A + N L+ +R
Sbjct: 64 QEIISYASGVLPPPAVAIVRQTLIQLV-QQGFGAGLLGAAVLLVTAGNVYLTLQRGADRL 122
Query: 120 YRVVEMRS-------------WYITRLISFGYVLLASVTLV---IMSFVFVAIPLALAYV 163
++ +R + R+ +F V+L + +V I + + + + +
Sbjct: 123 WK-DALRPLPESIPFGAQAFQFVRVRIEAFFIVILIGLLIVADQISANLRMIPAGVVQDL 181
Query: 164 RKFFPALGNLLLI---IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
++ P L + + + I GR+ + + + LP+ K ++PG +
Sbjct: 182 QQTLPWLADFMDVFPLIQVGRVLFSFAGFSAMALLLQALLPSRKVPFPPLIPGSLLIGFL 241
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
V + + I++ Y + ++ +++YM+GV G + + + +
Sbjct: 242 LTVLNLAVSRSILSLGARFQAYGVIGGVLVLTLWVYMVGVVIYFGQCWSVELALLRQK 299
>gi|311739949|ref|ZP_07713783.1| multiple transmembrane domain protein [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311305022|gb|EFQ81091.1| multiple transmembrane domain protein [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 359
Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 100/266 (37%), Gaps = 17/266 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D + E + E G A+ I+ ++LS+FP + + A++ +++ +
Sbjct: 39 DHLMRMNERYGAEGGNQFAAGITYYSVLSIFPLAMLVVATVAAVLANR--EDLLNDLQSH 96
Query: 70 WPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--E 124
I + D + ++L +F I L + + LRI ++ + + E
Sbjct: 97 ITSSIDGDMGDTVNEILDTAIDQRGAMFGIGGLTTLWSGLGWMNNLRIGISAMWGIDANE 156
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL------AYVRKFFPALGNLLLIIW 178
S+ +L ++ V +I V A L + FP + +++ +
Sbjct: 157 GGSFLKKKLSDLVGLIGLIVAFLIAFGVTAAGSSGLTQKIFERVGIESFPGMDSVIFFVG 216
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
L + LI + LP K S L G +++ + L + I++ +T
Sbjct: 217 LAVGLLANLIVMWWLIMI---LPRTKVPKKSGLIGAAIGAVAFELLKQL-STLIMSSATG 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFIL 264
S A ++ +V +Y++ +
Sbjct: 273 SPAGAVFGPVIVLMVVMYLIWRVVLY 298
>gi|227432518|ref|ZP_03914502.1| ribonuclease BN family protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351696|gb|EEJ41938.1| ribonuclease BN family protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 280
Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 103/263 (39%), Gaps = 9/263 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F + + ALL+VFP ++ A + F ++ ++ P+ I +
Sbjct: 25 FTRSQIGYVGPTFAYYALLTVFPILMGAALIVSFTSIS--TADLLAMMRNVLPKNIENIV 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ VL+ + L + S L + S + R S N V E + TR SF +
Sbjct: 83 FPIMESVLSSRSTSLLSFSVLFTIWSISRVIAVFRQSFNAIADVNEHINSLFTRAFSFIW 142
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+L ++ + + + L V + P + R + L +++ L+ ++
Sbjct: 143 LL----FILTLFALLMVGSNVLTIVIQHLPYSEWTNFLQHQTRWFIW-LGIWLALVMMNF 197
Query: 199 FLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
FLPA ++ +L G + + FT Y Y ++S++ L++L
Sbjct: 198 FLPAKDARAPFRFVLVGGFLELVMLNLLNRGFTFYAQFALGKYDFYQSVSSMIAMLIWLN 257
Query: 257 MLGVFFILGAELNASMIIYYWRK 279
++ +LG + + + WRK
Sbjct: 258 LIATILVLGYVVIKWLSVINWRK 280
>gi|332293345|ref|YP_004431954.1| ribonuclease BN [Krokinobacter diaphorus 4H-3-7-5]
gi|332171431|gb|AEE20686.1| ribonuclease BN [Krokinobacter diaphorus 4H-3-7-5]
Length = 318
Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 109/272 (40%), Gaps = 10/272 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TV 62
V ++ D + ++ D + +++ ++ A+LS+ +V N+ G + V +
Sbjct: 18 KIKDVPRLMVDTYKKWMASDPFKLSAIVAYYAILSLPALVVIILNIVGAVWGRDIVQGEL 77
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + A+ I ++ T+ L Y ++ L+ +L+ +
Sbjct: 78 LAEITKVLGQETAESIRLMMVDRGDEETGFFTATVGILVLLYGATGVFFQLQQALDTIWG 137
Query: 122 VVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V + +R FG++L+ L+I + + +F PA +L+
Sbjct: 138 VNLNEQDGILNIIKSRAKGFGFILIIGFLLLISFIATSLLSAFSNRLAEFLPA--SLIEF 195
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I+ I +++ +++ + FLP+ + ++ G T I +++G V +Y T
Sbjct: 196 IFIIDIAISLIVIYMLFAALFKFLPSVYVRWKAVRVGAGLTTILFILGEVAMAYYFNTM- 254
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ Y SI+ ++++ + GA
Sbjct: 255 EPGSTYGAAGSIILIMLWVSYSSLILFFGANF 286
>gi|227541839|ref|ZP_03971888.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51866]
gi|227182282|gb|EEI63254.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51866]
Length = 361
Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 112/267 (41%), Gaps = 18/267 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD I E + E G A+ I+ ++LS+FP ++ LAGF ++ P ++ +
Sbjct: 38 FDHIMRMNERYGEMGGNQYAAGITYFSVLSLFPLLMLAFGLAGFFLKNR--PELLAQIEE 95
Query: 69 AWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
++ + + + QV++ A +F+I AL A + + LR +++ +++
Sbjct: 96 QITSSLSGELGETVNQVVSTAIDQAGAVFSIGALTALWSGLGWMNNLRFGVSQQWKIDPT 155
Query: 126 -RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ + +L +L +TL + V L + L + I I A
Sbjct: 156 GGNFVMNKLRDLLGLLGLMLTLSLAFGVTAVGSSGLTHRILELLQLEQVPGIGAITTIVA 215
Query: 185 TMLAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISW----VVGAVLFTHYIVTFST 237
+L + F+ ++ ++P K+ + S G + + + +G++ F++ + +
Sbjct: 216 IILGIGANFLVFFWLIKYMPRGKTPVKSAAQGALIGALIFEVFKQLGSMFFSNALSNPAG 275
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFIL 264
A I+ +V LY + +
Sbjct: 276 -----ATFGPIIGIMVLLYFIWRILLY 297
>gi|227486998|ref|ZP_03917314.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51867]
gi|227093072|gb|EEI28384.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51867]
Length = 361
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 112/267 (41%), Gaps = 18/267 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD I E + E G A+ I+ ++LS+FP ++ LAGF ++ P ++ +
Sbjct: 38 FDHIMRMNERYGEMGGNQYAAGITYFSVLSLFPLLMLAFGLAGFFLKNR--PELLAQIEE 95
Query: 69 AWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
++ + + + QV++ A +F+I AL A + + LR +++ +++
Sbjct: 96 QITSSLSGELGETVNQVVSTAIDQAGAVFSIGALTALWSGLGWMNNLRFGVSQQWKIDPT 155
Query: 126 -RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ + +L +L +TL + V L + L + I I A
Sbjct: 156 GGNFVMNKLRDLLGLLGLMLTLSLAFGVTAVGSSGLTHRILELLQLEQVPGIGAITTIVA 215
Query: 185 TMLAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISW----VVGAVLFTHYIVTFST 237
+L + F+ ++ ++P K+ + S G + + + +G++ F++ + +
Sbjct: 216 IILGIGANFLVFFWLIKYMPRGKTPVKSAAQGALIGALIFEVFKQLGSMFFSNALSNPAG 275
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFIL 264
A I+ +V LY + +
Sbjct: 276 -----ATFGPIIGIMVLLYFIWRILLY 297
>gi|311743490|ref|ZP_07717296.1| ribonuclease BN [Aeromicrobium marinum DSM 15272]
gi|311312620|gb|EFQ82531.1| ribonuclease BN [Aeromicrobium marinum DSM 15272]
Length = 361
Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 99/252 (39%), Gaps = 16/252 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ + ++ G +A+ I+ + +++FP ++ ++ GFL G ++D +P
Sbjct: 45 VVYKYFDDQGPYLAAIIAYYSFIAIFPILLISTSVLGFLLQGDPGLSDRLLDTALSQFPI 104
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SWYI 130
V + E L + G + +LAA Y + ++ + + N A+ V + ++
Sbjct: 105 VGDQLGRPEGL----TGSTGAIVVGSLAALYGALGLGQSTQNAANIAWSVPRNSRANPFL 160
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S + A V +++++ + A + F + L I+ ALF
Sbjct: 161 MRLKSLILLATAGVGILVIAVGSSVLANAQSINETFSDEINLALRIVGFVLSVGIFWALF 220
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY-STMYAGLASIM 249
+ A + + +L G T W + Y+ S+M A ++
Sbjct: 221 -------RLVSAGRGRWPYLLAGAAVTAGLWQLLQWAGQAYVSNVINTASSMNGTFALVL 273
Query: 250 TCLVFLYMLGVF 261
+ F+Y+ +
Sbjct: 274 GLIAFIYVAALM 285
>gi|328675353|gb|AEB28028.1| Ribonuclease BN [Francisella cf. novicida 3523]
Length = 398
Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 106/268 (39%), Gaps = 10/268 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVP 60
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ A
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 68 SLQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + L+ Y L ++ ++M FVF++ ++ + +
Sbjct: 127 YANRQRPMLQSLLV---YWALMTMGPLLMGFVFISSTYLISMA-----WFVKDIGMEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G V+ LP + L I + + +F Y+ TYS
Sbjct: 179 LSGLSLIFLTAGFFVVYKILPNTRINSQIALLAAFLVAIVFTLAKKIFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L+ I ++++++ +LGA +
Sbjct: 239 IYGSLSLIPIFILWVFVTWQITLLGAVM 266
>gi|19551908|ref|NP_599910.1| hypothetical protein NCgl0648 [Corynebacterium glutamicum ATCC
13032]
gi|62389567|ref|YP_224969.1| ribonuclease BN family membrane protein [Corynebacterium glutamicum
ATCC 13032]
gi|145294851|ref|YP_001137672.1| hypothetical protein cgR_0798 [Corynebacterium glutamicum R]
gi|21323444|dbj|BAB98071.1| tRNA-processing ribonuclease BN [Corynebacterium glutamicum ATCC
13032]
gi|41324901|emb|CAF19383.1| membrane protein ribonuclease BN-like family [Corynebacterium
glutamicum ATCC 13032]
gi|140844771|dbj|BAF53770.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 361
Score = 83.3 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 100/262 (38%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
FD + E F + G +++ I+ ++LS+FP + +AG + G + + + + +
Sbjct: 38 FDHLMRMNERFGAKGGNQLSAGITYFSVLSIFPIAMLVFGIAGVILAGNPEVLTDIQNRI 97
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A I + I +A + I + A + + LR ++R + +
Sbjct: 98 NDALEGEIGNTVNGIIDSAIA-QRGAVLGIGGVTALWSGLGWMANLRFGVSRMWAIDPTE 156
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGRI 182
++ +L +++ + + + + L F LG + I W
Sbjct: 157 GNFIQKKLTDLVALIVLLLAMGVAFGITALGASGLTKNLLDFVGLGEIPGISYITWVVAA 216
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+LA F+ +++ LP K + L + I + V + + + + + +
Sbjct: 217 LVGVLANFLVFMWLIFSLPRTKVPMKPGLQAALLGAIGFEVVKQVGSL-LASNALSNPAG 275
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A I+ +V LY++ +
Sbjct: 276 AAFGPIIGIMVVLYLIWRILMY 297
>gi|121604512|ref|YP_981841.1| putative ribonuclease BN [Polaromonas naphthalenivorans CJ2]
gi|120593481|gb|ABM36920.1| putative ribonuclease BN [Polaromonas naphthalenivorans CJ2]
Length = 311
Score = 83.0 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 93/258 (36%), Gaps = 4/258 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
I+ F G +A ++ ALLS+ P ++ A + + + G
Sbjct: 34 QIIKGFRANQGLLLAGAVAYYALLSIVPLLILIAIALSHVVDQDALLASLGRYIGWLAPG 93
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMRSWYI 130
+ I E+ LA + + + +FSS L +++ + R + +
Sbjct: 94 ESNVIVKELTNFLAHREV-MGWVLLVTMLFFSSLAFTVLENAMSVIFLHRVAIRRRHFLV 152
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ ++ + Y+ + ++++ V + +F +L +
Sbjct: 153 SAVLPYCYIFCLGLGFLLVTLVAASFQALGDKSIEFLGWSWSLSGFSGVLLYLLGLTGEI 212
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L V+L +P + + L G + + W V + Y T S +Y L + +
Sbjct: 213 FVLTSVYLVMPVGQLSLRRALIGGVTAALLWEVTRHVLVWYFATLSQVGVVYGSLTTAIV 272
Query: 251 CLVFLYMLGVFFILGAEL 268
L+ L + +LGA++
Sbjct: 273 VLLSLEIAATLLLLGAQV 290
>gi|307565954|ref|ZP_07628413.1| YihY family protein [Prevotella amnii CRIS 21A-A]
gi|307345382|gb|EFN90760.1| YihY family protein [Prevotella amnii CRIS 21A-A]
Length = 446
Score = 82.6 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/258 (17%), Positives = 104/258 (40%), Gaps = 5/258 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+Y E W A+ ++ + L+++ P +A G ++ +F P
Sbjct: 39 LYLVFNGLFVERHWGYAAQLTYNTLMALVPMFAAILAIARGFGFEDYIVEWCRQLFANQP 98
Query: 72 EVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
AK + + + G + IS + Y + + N + V + RS
Sbjct: 99 -NTAKVVLNLAKSYINYTHTGVILGISLVWMLYSVISLFNNIEAVFNGIWGVKKERSMGR 157
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ +TL+++S + + + ++ + F L +L + + + ++L L
Sbjct: 158 AITDYVSILIFLPLTLILLSGLSIFFQSVIGHLPE-FQLLTPILQELISFMLPLSILTLL 216
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ LP K ++ I + S ++ ++ H V F++Y+ +Y LA++
Sbjct: 217 --FISMYTLLPNTKVRVSMIFIPALMAAFSIIIIQSIYIHCQVFFASYNLIYGSLAALPL 274
Query: 251 CLVFLYMLGVFFILGAEL 268
+++L + I AEL
Sbjct: 275 LMLWLQLSWYICIGFAEL 292
>gi|300172788|ref|YP_003771953.1| ribonuclease BN [Leuconostoc gasicomitatum LMG 18811]
gi|299887166|emb|CBL91134.1| Ribonuclease BN [Leuconostoc gasicomitatum LMG 18811]
Length = 284
Score = 82.6 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 100/252 (39%), Gaps = 9/252 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F+ + + ALL+VFP ++ A + + +I ++ P I K +
Sbjct: 25 FLRAQVGYVGPTFAYFALLTVFPMLIAIAIIISITNVSET--NIISLIQSVLPRDIEKIV 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ VL+ + L + S L + S + R+S NR V + S ++R SF +
Sbjct: 83 LPILQSVLSSKSTSLLSFSVLLTLWTVSRVIAVFRVSFNRIADVEDRISNLLSRFWSFVW 142
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+L+ ++ + + L + + + + + L +++ LI ++
Sbjct: 143 LLIIIAAFGVLMISSNILTIVLQQI-----PINQWTSFLQHQTKWLIWLGMWLALIMMNY 197
Query: 199 FLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
LP ++ + + G + + + + FT Y Y +++I+ L++L
Sbjct: 198 LLPTKEGRAPLRFVAIGSLIEVGALNILNIGFTWYANLAVKQYGFYQSMSAIIVLLIWLN 257
Query: 257 MLGVFFILGAEL 268
++ + G L
Sbjct: 258 LIATILVTGYVL 269
>gi|284165429|ref|YP_003403708.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284015084|gb|ADB61035.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 260
Score = 82.6 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/264 (16%), Positives = 89/264 (33%), Gaps = 14/264 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + + D +A+ + A +S+ P ++ + LG +I V
Sbjct: 4 RETLTAVYRTASDRDISFLAAAFAYYAFVSLIPLVLLALVVGSLLGGEDAAQRLITVAGD 63
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + +TD + ++ AA+ + L ++ ++ Y V S
Sbjct: 64 FLPAAGEELVTDALT--TESGRAEATVVALAVAAWGALKVFRGLSLAFDKVYDEVAEESL 121
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
L+ V + + + I + + + P G L +
Sbjct: 122 VDQ----LRDGLVVIVAGAGATALMIVIGTIVGFAAEVLPFAGVLS-------WLTLLTG 170
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ LP + +LPG I W V F Y Y Y + +
Sbjct: 171 LVLVFLPIYYVLPPIPVEFTDVLPGAAVAAIGWTVLQAGFQLYAANAGQYQA-YGAVGVV 229
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ + +LY G+ + GA LN +
Sbjct: 230 LLFVTWLYFAGMLILFGAVLNVVL 253
>gi|297567055|ref|YP_003686027.1| ribonuclease BN [Meiothermus silvanus DSM 9946]
gi|296851504|gb|ADH64519.1| ribonuclease BN [Meiothermus silvanus DSM 9946]
Length = 266
Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 92/265 (34%), Gaps = 18/265 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D + A + + A+ ++ AL S+ P + + G + A +++ V
Sbjct: 2 DFLRHAYRLYNQSHIPFFAASLAYYALFSLMPLLFLLVGVFGLVLAGN--EALLEAVRQR 59
Query: 70 WPEVIAKPITDE------ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
EV + +L+ L A L S L + +SN AL ++ ++
Sbjct: 60 LSEVALLLFPTQPDLAQGLLKFLTSGAAPLTAGSFLVLFWSASNFFAALAYAMGVIFQTP 119
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RLI+ + L++++ +++ L Y+ L L +
Sbjct: 120 ---PGFRNRLIALIAPGALGLGLILLALGGLSLAFILRYLPPELGFLRGSLEHV------ 170
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + LP + + L G F + W + + S Y Y
Sbjct: 171 LPVLVTVGLFYLTYRLLPRPAPRRLHALSGAGFAALVWEGVRLGIPALLPR-SQYELFYG 229
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
LA + ++ Y+ ++G L
Sbjct: 230 PLAGFLLAMLGFYLSMWILLVGGLL 254
>gi|260579132|ref|ZP_05847024.1| ribonuclease [Corynebacterium jeikeium ATCC 43734]
gi|258602731|gb|EEW16016.1| ribonuclease [Corynebacterium jeikeium ATCC 43734]
Length = 360
Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 101/269 (37%), Gaps = 16/269 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
D + + + E+ G A+ I+ +++++FP ++ + + G + + V+
Sbjct: 34 WPWLDHVLRMQDRYTEQGGNQYAAGITYFSVMTIFPLMMLTLAVLAMILAGNERLLNDVM 93
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D V + + + I Q + K +F+I L A + + LR+ ++ ++V
Sbjct: 94 DKVANMGDGNMGEVLQTIIEQSI-EQRKSVFSIGLLLALWTGLGWIAHLRLGVSEMWKVD 152
Query: 124 EMR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ ++ ++ V+L+ + L L ++ I +
Sbjct: 153 GKPAGFVSGKVKDLIGLIGLLVSLIAAFAITTIGNSGLTTQLLDAVGLADVPGIRYITFA 212
Query: 183 YATMLAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISW----VVGAVLFTHYIVTF 235
A ++AL F ++ L+LP K S + I + + V F++ +
Sbjct: 213 VALLVALIANFCVFFWMILYLPRTKVPRRSAVKAAIIGAVLFEVFKQFATVFFSNALSNP 272
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ A ++ +V +Y + +
Sbjct: 273 AG-----AAFGPVIGVMVLMYFIWRILLY 296
>gi|258651531|ref|YP_003200687.1| ribonuclease [Nakamurella multipartita DSM 44233]
gi|258554756|gb|ACV77698.1| ribonuclease [Nakamurella multipartita DSM 44233]
Length = 361
Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 101/263 (38%), Gaps = 15/263 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
AI + + G A ++ + LS+ P ++ G ++ G + + + + + P+
Sbjct: 43 AITRYGDRLGSQFAGAMTYFSFLSLVPILMVGFSVGGIVLRNNQELLARLESEIAAMLPK 102
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMR----- 126
IA PI I V+A P G+ + L A Y + LR ++ + E
Sbjct: 103 EIADPIVALIDSVVANP-LGVGIVGLLIALYSGIGWMGNLRKAVRALWGKQFETGKATAD 161
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + L G + +V +V+ + + V LG+ ++ + +
Sbjct: 162 NLVVGTLKDLGALAGLAVAIVVSLGLSAVGSQFASAVADLL-GLGDQAWLVPVLTVTTIL 220
Query: 187 LAL---FIGLIFVHLFLP--AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+A+ + ++V+ LP + +S + L G I I + + T + F+ S
Sbjct: 221 IAMAADVLIFMWVYTVLPPKSQRSSFKARLRGSIVAAIGFEILKYALTTILPAFTGTSRT 280
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A ++ L F ++ +
Sbjct: 281 AAIFGPVIGLLFFFNLVAQLVLF 303
>gi|260434985|ref|ZP_05788955.1| YihY family protein [Synechococcus sp. WH 8109]
gi|260412859|gb|EEX06155.1| YihY family protein [Synechococcus sp. WH 8109]
Length = 284
Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 98/274 (35%), Gaps = 20/274 (7%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+++ + L S FP ++ ++A G + V+ V P + +
Sbjct: 1 MDLSAAFAYFVLQSFFPLLLIALSVAARVFGRTDSLDNVLASVTQVLPPSATSLVDSTLR 60
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-----RVVEMRSWY-------IT 131
++ G + + +SN L+ +R + SW+ T
Sbjct: 61 GLVD-QGFGAGILGVVVLLLTASNAYLTLQRGADRLWSEILPESSIGLSWWQQVVQFCRT 119
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPL---ALAYVRKFFPALGNLLL---IIWNGRIYAT 185
R+ +F V SV ++ V L L + P L + I+ GRI
Sbjct: 120 RVEAFLTVFAISVLIIFQQLVLSVGQLPEEILGVLDGVIPGLMGFVRSSPILPLGRIIVP 179
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L + + + LP+ + + ++PG + + + IV+ Y +
Sbjct: 180 ALILSLMAWLLQVVLPSRRVPSIPLIPGSLLIGFGLAFLNKILSLSIVSLGNRYQAYGVI 239
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ ++++++GV G L+ ++ K
Sbjct: 240 GSVLVLTLWVWLVGVILYFGQCLSVELVAVRLAK 273
>gi|227549942|ref|ZP_03979991.1| ribonuclease [Corynebacterium lipophiloflavum DSM 44291]
gi|227077958|gb|EEI15921.1| ribonuclease [Corynebacterium lipophiloflavum DSM 44291]
Length = 367
Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 99/260 (38%), Gaps = 9/260 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ E F +E G +++ I+ ++L+++P + GF + + + + +
Sbjct: 47 LLRMNERFAKEGGNQLSAGITYFSVLALYPLAMLLFAGMGFFLANRPELIEQIRTQLDNS 106
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEMRS 127
+ I+ I +A + I L + + LR+ ++ + E +
Sbjct: 107 LGGEVGGVISQLIDSAIA-QRGAVAGIGLLTTLWSGLGWMNNLRVGISAMWKLDANEGGN 165
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL---LLIIWNGRIYA 184
+ + +L ++ + ++ V + LGN ++W +
Sbjct: 166 FIMKKLWDLLGLIGLILLFILAFAVTAIGTSSFTSDVMDHFGLGNFPGARFVVWLIGLAV 225
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ A F+ + ++ +F+P K S L G + ++ + F IV+ +T + A
Sbjct: 226 GIFANFLVMAWLVIFMPRTKVPWRSGLKGALLGAFAFELIKQ-FATVIVSSATKNPAGAI 284
Query: 245 LASIMTCLVFLYMLGVFFIL 264
I+ +V LY++ +
Sbjct: 285 FGPIIALMVVLYLIWRVVLY 304
>gi|213964986|ref|ZP_03393185.1| putative ribonuclease [Corynebacterium amycolatum SK46]
gi|213952522|gb|EEB63905.1| putative ribonuclease [Corynebacterium amycolatum SK46]
Length = 341
Score = 82.6 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 96/265 (36%), Gaps = 8/265 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
FD + E + E+ G A+ ++ ++LS+FP I+ + + G Q + +
Sbjct: 35 WAWFDHVMRMQERYSEQGGNFFAAAVTYFSVLSIFPLIMTAFAILALVLRGNDQLLEQIQ 94
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + I I + A G+FT+ +A + + L ++ + ++
Sbjct: 95 SAITDSIDGSMGDTINAIIEGAID-QAGGVFTVGFIATLWSGLGWMGNLSNAVTQLWKRP 153
Query: 124 EM-RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
++ + ++ +L V +V+ V L L ++ I +
Sbjct: 154 LGASNFVMGKVRDLLRLLGMLVMIVLTFAVTAVGSSGLTQSLLDKVGLADIPGITIIAGL 213
Query: 183 YATMLALFIGLIFVHL---FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
A + L + FLP + + S G I I + V L + + + +
Sbjct: 214 IAIAVGLLANWLLFFWMLAFLPRGGAPLRSAAKGAIIGAIGFEVVKQLGSVFFSNALS-N 272
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
A ++ +V Y++ +
Sbjct: 273 PAGAVFGPVIGLMVVFYLIWRITMY 297
>gi|308189712|ref|YP_003922643.1| hypothetical protein MFE_01410 [Mycoplasma fermentans JER]
gi|307624454|gb|ADN68759.1| conserved hypothetical membrane spanning protein [Mycoplasma
fermentans JER]
Length = 349
Score = 82.2 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 96/267 (35%), Gaps = 9/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I + F ++ + + L+S P I L + + + I+ V
Sbjct: 76 ELINRTYKKFTDKSFVFIPLSTAFYFLVSFVPIITIMIVLLSLIPGYHTL--FINEVLTR 133
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ I L I LA+ + +S+G S N Y + +W+
Sbjct: 134 IIPGVTSIIKIPDTTKKGAQLTSLI-ILCLASLWMASSGFGKFIYSQNYIYGHENLGNWF 192
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ VL S+ L + + +++ Y + + + ++ L
Sbjct: 193 TNRIKGLFVVLGISIYLFLAAALYLFFYQTFTYNMSTYHKNIYFYITF----SFYLLIML 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ GL ++ P+ K ++ PGV+ T ++ +F + + Y Y + S M
Sbjct: 249 YFGLTLLYTMSPSFKLSWTTVFPGVLITSFPVMIFITIFGF-LTSLINYDK-YGIIGSFM 306
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
+F+ L F LG +N + Y
Sbjct: 307 YIALFVSFLTYFMFLGIIVNEAYYKTY 333
>gi|323527971|ref|YP_004230123.1| ribonuclease BN [Burkholderia sp. CCGE1001]
gi|323384973|gb|ADX57063.1| ribonuclease BN [Burkholderia sp. CCGE1001]
Length = 300
Score = 82.2 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 98/266 (36%), Gaps = 6/266 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGA-NLAGFLGAHQFVPTVIDVVFGAWPE 72
+ ++ F G +A ++ ALLS+ P ++ L+ + H +P + ++ P
Sbjct: 22 ETLKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRVVPQHVLLPALGHLLRWLVPG 81
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR---VVEMRSWY 129
+ + + + + +FSS L +++ + V+ R +
Sbjct: 82 QSRALVHELAN--FLAHRAVIGWVLFVTMLFFSSLAFTVLENAMSLIFVHRVVIRRRHFL 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
++ L+ + Y+L + +I++ V + A F +L +
Sbjct: 140 LSALLPYCYILFLGIGALIVTVVSTGLEAVGAEGVDLFGTYVSLQGPSRVLLYLLGLAGE 199
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L +++ +P + + L G I + W + + Y T S S +Y L +
Sbjct: 200 IFVLTSIYMVMPVGRPSLKHALFGGIVAAVLWEITRHVLVWYFATLSQVSVVYGSLTMAI 259
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
L L L + GA++ A +
Sbjct: 260 VILFSLEWLATLLLFGAQVIAQYERF 285
>gi|319776898|ref|YP_004136549.1| ribonuclease bn-like family enzyme [Mycoplasma fermentans M64]
gi|318037973|gb|ADV34172.1| Ribonuclease BN-like family enzyme [Mycoplasma fermentans M64]
Length = 349
Score = 82.2 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 96/267 (35%), Gaps = 9/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I + F ++ + + L+S P I L + + + I+ V
Sbjct: 76 ELINRTYKKFTDKSFVFIPLSTAFYFLVSFVPIITIMIVLLSLIPGYHTL--FINEVLTR 133
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ I L I LA+ + +S+G S N Y + +W+
Sbjct: 134 IIPGVTSIIKIPDTTKKGAQLTSLI-ILCLASLWMASSGFGKFIYSQNYIYGHENLGNWF 192
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ VL S+ L + + +++ Y + + + ++ L
Sbjct: 193 TNRIKGLFVVLGISIYLFLAAALYLFFYQTFTYNMSTYHKNIYFYITF----SFYLLIML 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ GL ++ P+ K ++ PGV+ T ++ +F + + Y Y + S M
Sbjct: 249 YFGLTLLYTMSPSFKLSWTTVFPGVLITSFPVMIFITIFGF-LTSLINYDK-YGIIGSFM 306
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
+F+ L F LG +N + Y
Sbjct: 307 YIALFVSFLTYFMFLGIIVNEAYYKTY 333
>gi|68536778|ref|YP_251483.1| hypothetical protein jk1688 [Corynebacterium jeikeium K411]
gi|68264377|emb|CAI37865.1| putative membrane protein [Corynebacterium jeikeium K411]
Length = 360
Score = 82.2 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 100/269 (37%), Gaps = 16/269 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
D + + + E+ G A+ I+ +++++FP ++ + + G + + V+
Sbjct: 34 WPWLDHVLRMQDRYTEQGGNQYAAGITYFSVMTIFPLMMLTLAVLAMILAGNERLLNDVM 93
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D V + + I Q + K +F+I L A + + LR+ ++ ++V
Sbjct: 94 DKVANMGDGNMGGVLQTIIEQSI-EQRKSVFSIGLLLALWTGLGWMAHLRLGVSEMWKVD 152
Query: 124 EMR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ ++ ++ V+L+ + L L ++ I +
Sbjct: 153 GKPAGFVSGKVKDLIGLIGLLVSLIAAFAITTIGNSGLTTQLLDAVGLADVPGIRYITFA 212
Query: 183 YATMLAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISW----VVGAVLFTHYIVTF 235
A ++AL F ++ L+LP K S + I + + V F++ +
Sbjct: 213 VALLVALIANFCVFFWMILYLPRTKVPRRSAVKAAIIGAVLFEVFKQFATVFFSNALSNP 272
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ A ++ +V +Y + +
Sbjct: 273 AG-----AAFGPVIGVMVLMYFIWRILLY 296
>gi|113955387|ref|YP_731728.1| YihY family protein [Synechococcus sp. CC9311]
gi|113882738|gb|ABI47696.1| YihY family protein [Synechococcus sp. CC9311]
Length = 310
Score = 82.2 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 104/282 (36%), Gaps = 21/282 (7%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPT 61
+ ++ A + + D +++ + L S+FP ++ ++A +
Sbjct: 6 RLRRLVRSLWRACLRWAKCDCVDLSAAFAYYTLQSIFPILLISLSIASWFLGRQDALESK 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+I G P + + ++Q++ + + + N L+ R +
Sbjct: 66 IIAYASGVLPPSAVVIVQNTLMQLVRQGFGAGLLGAGVLLL-TAGNVYLTLQRGSARLWE 124
Query: 122 ---VVEMRS---------WYITRLISFGYVLLASVTLVI---MSFVFVAIPLALAYVRKF 166
V + R+ + RL +F V+L + +V+ + V + AL +
Sbjct: 125 GVIVPQQRNLPFKLQAVQFIRIRLEAFFVVILIGLLVVLDQLSANVRMIPTAALTELSVA 184
Query: 167 FPALGNLLLII---WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
P LG L I GR+ L + + + LP+ + ++PG + V
Sbjct: 185 IPWLGAFLSHIPVLQFGRLMVPFLGFSVSALSLQFLLPSRRVPFKPLIPGSLLIGFLLTV 244
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + I++ Y + S++ ++++M+GV G
Sbjct: 245 LNLAVSRSILSLGARYQAYGVIGSVLVLTLWVWMVGVVIYFG 286
>gi|160895707|ref|YP_001561289.1| ribonuclease BN [Delftia acidovorans SPH-1]
gi|160361291|gb|ABX32904.1| ribonuclease BN [Delftia acidovorans SPH-1]
Length = 331
Score = 82.2 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 106/270 (39%), Gaps = 16/270 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVF 67
+++A++ +++ DG M++ +S +LS+ P ++ L G+ +V +ID V
Sbjct: 30 LRAMWNAVQLWLDADGLRMSAAMSFYGILSLAPLLLLLVGLLGWWVDRSYVEHQLIDQVQ 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEMR 126
E A+ + + L ++ + GV L+ +L + +
Sbjct: 90 DVIGERGAQVVRGALESAQRPDEGRLASLFGFILLMSGATGVFVELQSALEKLWTSNGEP 149
Query: 127 S-----WYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLI 176
W+ RL YVL L++ + AI L + LG L+ +
Sbjct: 150 PPPKAVWWRMAALRLRGLTYVLALGFLLLVSMALSTAIQLITNWAGTKLQMQPLGPLISL 209
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I + + LF+GL+ K ++ ++ G I + + +G Y+ T +
Sbjct: 210 INECVSFGIAVLLFVGLM---RIGSGPKPRLRYLIFGAIVGALLFTLGKQALAWYLST-A 265
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ Y S++ L+++Y +L A
Sbjct: 266 AVVSAYGAAGSLVVLLMWIYFSSAILLLSA 295
>gi|300711967|ref|YP_003737781.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299125650|gb|ADJ15989.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 259
Score = 81.8 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 103/265 (38%), Gaps = 14/265 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++++ + + ++ +A ++ A +S+ P ++ A L ++ +
Sbjct: 5 YEVLVEIVREVRRQNLPFLAGSLAFYAFVSLLPLLLLVLVAASLLAGETVARYLLALTRL 64
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ I + A G + L + + A+ + + Y ++
Sbjct: 65 YLSPTGQDLLAGAITE--ATGWVGSSIVGLLVLLWAAFRMFLAIDTAFAQLYETPRTKTS 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R+ G + +++ LV+++ V A L + A+ +LLL +
Sbjct: 123 LGQRVRD-GLIASSAIVLVLVAAVATAGVFTLLPDFSYSGAVDSLLL----------VCG 171
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ P + ++ +LPG +F + W + LF Y + +T + ++ +
Sbjct: 172 LLVAFLPLYYVFPNVEVTLVEVLPGALFAAVGWALLQWLFQFY-ASVATLAAVFGVIGGA 230
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++LY + + G +N +
Sbjct: 231 LLFLLWLYFGALIILFGVVVNVVLA 255
>gi|295097114|emb|CBK86204.1| ribonuclease, putative [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 343
Score = 81.8 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 101/280 (36%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + + +
Sbjct: 60 LIRAAERFNDRMGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIFNKILTN 119
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + L A Y N + LR ++ ++ V E R
Sbjct: 120 VSDQTLAATLKSTINTAVQQRTTVGIVGLLIALYSGVNWMGNLREAIRAQSRDVWERRPQ 179
Query: 128 ----WYITRLISFGYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR- 181
++ L F ++ V LVI +S VA + + L W G
Sbjct: 180 DQEKIWVKYLRDFISLIGLLVALVITLSITSVAGSAQQMIISALYLDYIEWLKPAWRGIG 239
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G + I + V ++ T+ + + S
Sbjct: 240 LAISIFANYLLFFWIFWRLPRHRPRKKALMRGTLIAAIGFEVIKIVMTYTLPSLVK-SPS 298
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 299 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 338
>gi|309803176|ref|ZP_07697273.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
gi|308164684|gb|EFO66934.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
Length = 149
Score = 81.8 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 49/121 (40%)
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
+ + ++ L + + R +L + I+++ +P K
Sbjct: 1 MVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILFNIYINYTIPNISMKSRITF 60
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
PG IFT I W + F Y+ F Y + + + L++L + + F++G LNA+
Sbjct: 61 PGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFLMWLNLAAILFLIGVCLNAT 120
Query: 272 M 272
+
Sbjct: 121 I 121
>gi|29654869|ref|NP_820561.1| YihY family protein [Coxiella burnetii RSA 493]
gi|153208752|ref|ZP_01946990.1| YihY family protein [Coxiella burnetii 'MSU Goat Q177']
gi|154707441|ref|YP_001423830.1| ribonuclease BN [Coxiella burnetii Dugway 5J108-111]
gi|161830403|ref|YP_001597413.1| YihY family protein [Coxiella burnetii RSA 331]
gi|165918777|ref|ZP_02218863.1| YihY family protein [Coxiella burnetii RSA 334]
gi|212212070|ref|YP_002303006.1| ribonuclease BN [Coxiella burnetii CbuG_Q212]
gi|212219292|ref|YP_002306079.1| ribonuclease BN [Coxiella burnetii CbuK_Q154]
gi|32699631|sp|Q83BD3|Y1578_COXBU RecName: Full=UPF0761 membrane protein CBU_1578
gi|189039567|sp|A9KF31|Y409_COXBN RecName: Full=UPF0761 membrane protein CBUD_0409
gi|189039568|sp|A9N9B0|Y1765_COXBR RecName: Full=UPF0761 membrane protein COXBURSA331_A1765
gi|226736668|sp|B6J517|Y1808_COXB1 RecName: Full=UPF0761 membrane protein CbuK_1808
gi|226736669|sp|B6J454|Y433_COXB2 RecName: Full=UPF0761 membrane protein CbuG_0433
gi|29542138|gb|AAO91075.1| ribonuclease BN [Coxiella burnetii RSA 493]
gi|120575784|gb|EAX32408.1| YihY family protein [Coxiella burnetii 'MSU Goat Q177']
gi|154356727|gb|ABS78189.1| ribonuclease BN [Coxiella burnetii Dugway 5J108-111]
gi|161762270|gb|ABX77912.1| YihY family protein [Coxiella burnetii RSA 331]
gi|165917501|gb|EDR36105.1| YihY family protein [Coxiella burnetii RSA 334]
gi|212010480|gb|ACJ17861.1| ribonuclease BN [Coxiella burnetii CbuG_Q212]
gi|212013554|gb|ACJ20934.1| ribonuclease BN [Coxiella burnetii CbuK_Q154]
Length = 278
Score = 81.8 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 99/267 (37%), Gaps = 7/267 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+F + F EE A+ ++ + LL++ P + L F+ A Q V
Sbjct: 5 RFFKRSAFTLAYIYRRFHEEGCAYRATALAYTTLLALVPLTIVAFTLLSFVPAFQGVGVR 64
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++++ + A + + Q L GL I+ + + + + +
Sbjct: 65 LQNLIWENFVPTSAGMVAAYLSQ-LTQNVTGLSIINIFFLGIVALLLMYNINRAFVAIWH 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ L Y ++ ++ ++ V + + L +
Sbjct: 124 TEHH---FRLSLHFLIYFMVLLLSPFLLGAVMLLGTFLVQ--SPLVTDLIGWPYLGKGLL 178
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +FI + LP+AK K+ + G + T + + + FT Y+ F TY +
Sbjct: 179 FVLPYVLIFITFTLFNWVLPSAKVKLSHAVIGGLVTTVLFELAKFAFTVYLKFFPTYRVI 238
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y L+ I LV+LY+ +LGA +
Sbjct: 239 YGALSVIPIFLVWLYVSWTIILLGAVV 265
>gi|91787411|ref|YP_548363.1| ribonuclease BN [Polaromonas sp. JS666]
gi|91696636|gb|ABE43465.1| ribonuclease BN [Polaromonas sp. JS666]
Length = 321
Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 107/276 (38%), Gaps = 14/276 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + A++ ++E DG M++ +S +LS+ P +V + G+ +
Sbjct: 31 RHRLQHIYRPLRRAVDQWIEADGLRMSAAMSFYGILSLAPLLVLLVAVLGWWVEQSVIEI 90
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRA 119
+++D + A+ + + ++ A + GV + L+ + R
Sbjct: 91 SLVDQIRSVVGAQGAQVVQQALSSAREPSQGIAASLFAFGLLLSGATGVFSELQDAFERL 150
Query: 120 YRVVEMRS----WYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+R + W+ T RL Y+L L++ V + L + ++P +
Sbjct: 151 WRQGSGKPPQQKWWYTASLRLRGVAYILAIGFLLLVSLVVSTLLNLLSGWAGGYWP-VEK 209
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
I + +ALF+ L+ K + ++ G + + VG L Y+
Sbjct: 210 FAYAINEVASFGFSVALFVALM---RMSAGPKPALRYLVRGAAVGALLFAVGKHLMAFYL 266
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T + + Y S++ L+++Y +L A +
Sbjct: 267 ST-AAVVSAYGAAGSLVVILMWIYFSSAVLLLAASI 301
>gi|116626071|ref|YP_828227.1| ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
gi|116229233|gb|ABJ87942.1| ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
Length = 275
Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++I + +E + A IS S LLS FPF +L L + +
Sbjct: 12 LELIRPTARYIMETEAHVYALAISASVLLSFFPFCNVMLSLCRMLHWPAAEEAIYLALRD 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+P +A + + L S + + ++ E L ++LNRA+ + RS+
Sbjct: 72 YFPGELAGFLKRNL-----ALQGHLQLTSMVLLLFTANGIFEPLEVALNRAWGITRNRSY 126
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+LI+ G + + ++ L P L L+I+ A +
Sbjct: 127 LKNQLIALGMIFICGALAMLSLMFTAFNRQWLGAWSALAPVQSFLNLLIFKI---AAVPI 183
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV---LFTHYIVTFSTYSTMYAGL 245
+ L V+ LP K + P I+ + Y+ + Y+
Sbjct: 184 SILALFLVYWLLPNRKISPSRVAPAAIYVGLVLEGLKYVNLAIAPYLQ--AKLEHEYSIF 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNA 270
+ L++ ++ + + GAE A
Sbjct: 242 RHSVAILLWSFIAAMVVLAGAEWTA 266
>gi|87125235|ref|ZP_01081081.1| similar to serum resistance locus BrkB [Synechococcus sp. RS9917]
gi|86167004|gb|EAQ68265.1| similar to serum resistance locus BrkB [Synechococcus sp. RS9917]
Length = 291
Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 103/290 (35%), Gaps = 21/290 (7%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVF 67
++ A + E D +++ + L S+FP ++ + + Q ++D
Sbjct: 2 RSLWQAYVRWAECDCVDLSAAFAYYTLQSIFPLLLIVLAVTSWFLGRQEGLDQQIVDYTA 61
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA----YRVV 123
G P + + + +++ + + + N L+ +R Y
Sbjct: 62 GVLPPMAVGIVQTTLEKLIKQGFGAGLLGAGVL-LVTAGNVYLTLQRGADRIWLDYYPDA 120
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-----------FPALGN 172
+ + ++I F V L + LVI+ + + + A +R P L
Sbjct: 121 APEATWRQQVIQFLRVRLEAFFLVILIGLLIVLDQISANLRMIPATALHRSLEGLPWLDQ 180
Query: 173 LLLII---WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
L I G+ L + + FLP+ + + ++PG + V + +
Sbjct: 181 ALRSIPVLSFGQFVVPCLGFAGMALLLQFFLPSRRVPLRPLIPGSFLIGVLLTVLNLAVS 240
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
I++ + Y + S++ ++++ +GV G + + ++
Sbjct: 241 RSILSLGSRYQAYGVIGSVLVLTLWVWTVGVVIYFGQCWSVVLAKQRLKR 290
>gi|158338113|ref|YP_001519289.1| ribonuclease BN [Acaryochloris marina MBIC11017]
gi|158308354|gb|ABW29971.1| ribonuclease BN [Acaryochloris marina MBIC11017]
Length = 334
Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 99/271 (36%), Gaps = 11/271 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
F VF ++ + + +A+ ++ S+ P +V +A V+
Sbjct: 3 FDNVFWLLKVTGLEWQRDKASRLAAALAYYTAFSLAPVLVIVIAIASLAFNQSTVQGQVM 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRV 122
A I + + T+ +L + S G L+ +LN +++
Sbjct: 63 AQFKEWLGPDGAAIIRVMVRGTYLQGSGMRDTLGSLVLLFVGSTGLFTNLKDALNSIWKI 122
Query: 123 VEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + R +F VL + L+++ + + + + ++ I+
Sbjct: 123 QPAPDRGWKGFVRDRFFAFVMVLGVGLVLILILGLSTWLTAVSNSASTYVSSWIHVGRIL 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ + + ++ +LP + + + G T + + +G L + Y+ ++
Sbjct: 183 DS---VFSLSIITFIVALIYKYLPDVEIQWSDVWIGSFLTSLLFSIGKFLISLYLSR-NS 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S+ Y S+ L+++ F GAEL
Sbjct: 239 LSSTYGAAGSLAVVLLWVNYSAQIFFFGAEL 269
>gi|260599815|ref|YP_003212386.1| Inner membrane protein YhjD [Cronobacter turicensis z3032]
gi|260218992|emb|CBA34347.1| Inner membrane protein yhjD [Cronobacter turicensis z3032]
Length = 344
Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 96/264 (36%), Gaps = 12/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F E G + I+ + LS+ P ++ +AGF+ + + + + +
Sbjct: 60 LIRAFERFNERMGNQFGAAITYFSFLSMIPILMVSFAVAGFVLASHPTLLQDIFNKILQS 119
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-------V 122
+ + + + A Y N + LR ++ +R V
Sbjct: 120 VSDPTLAKTLSSSINAAVEQRTTVGIVGFAVALYSGVNWMGYLREAIRAQFRDDWERGAV 179
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWNG 180
+ +++ L F ++ V LVI + A + + A+G L +
Sbjct: 180 EDKEKFWLKYLRDFISLIGLLVALVITMSITSVAGSAQETIIRLLRLDAIGWLKPVWHMI 239
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + A ++ ++ LP + + ++L G + I + V ++ T+ + + S
Sbjct: 240 GLAVSFCANYLLFFWIFWRLPRHRPRKKALLRGTVIAAIGFEVIKIIMTYTLPSLVK-SP 298
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
A S++ + F Y +
Sbjct: 299 SGAAFGSVLGLMAFFYFFARLTLF 322
>gi|114705097|ref|ZP_01438005.1| hypothetical protein FP2506_09171 [Fulvimarina pelagi HTCC2506]
gi|114539882|gb|EAU43002.1| hypothetical protein FP2506_09171 [Fulvimarina pelagi HTCC2506]
Length = 286
Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 100/265 (37%), Gaps = 10/265 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ AI + + ++ + IS AL S+ P ++ +AG + GA
Sbjct: 6 RLFKAAILGWWNDRALSLGAAISFYALFSLGPVLLASVTIAGLFFGQDATRLAVVDEAGA 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF--SSNGVEALRISLNRAYRVVEM-- 125
A D +L G F++ +F ++ + L+ LN +R
Sbjct: 66 LIGADAAGALDSMLSAATQFGTGWFSVLFGIGMFFVLATGAIVELQDDLNIIFRSEPKYG 125
Query: 126 --RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RLIS VL L+I + + Y+ F L L+L + +
Sbjct: 126 DFWTIVRGRLISLALVLTLGFLLLISLVIDAGLTALSNYILDRFEDLTVLILGLNILFSW 185
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A LF + LP + + ++++ G T +G YI S ++ Y
Sbjct: 186 AAGTTLF---ALIFRLLPDKRLEWLTVIVGAALTAALLEIGKFAIGLYIGQ-SGITSTYG 241
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
AS++T L++++ F+ GAE
Sbjct: 242 SAASLVTILLWIFYTCQIFLFGAEF 266
>gi|297623076|ref|YP_003704510.1| ribonuclease BN [Truepera radiovictrix DSM 17093]
gi|297164256|gb|ADI13967.1| ribonuclease BN [Truepera radiovictrix DSM 17093]
Length = 287
Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 96/274 (35%), Gaps = 15/274 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVV 66
V I A + + + + ++ +LS+ P + + FL + +I V
Sbjct: 3 VLRIFSRAAMVWSSHNAPRLGAALAFYTVLSLAPLLFVAVGMTSVFLSQAEVQAGIIAQV 62
Query: 67 FGAWPEV------IAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNR 118
A E + + + I A P G+ + +S + LR SLN
Sbjct: 63 SRAVGEENAAIIAVLELLFRNIFDAYARPTTGVLASLGGFAGVLFGASLVLLELRASLNT 122
Query: 119 AYR----VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V R + L + +L L V V + L+ ++
Sbjct: 123 IWGIQAEVASKREGVLRFLKNRVISVLMVFGLGFSLLVLVVLNTYLSASAALLQGRVPVV 182
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + ++ +F +FV LP+AK + + G + + + + G L Y+
Sbjct: 183 M-LQRLETTLSLGLIFAFFLFVFKVLPSAKVQWREVWLGALVSTLLFAFGRYLIGAYLAN 241
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S S+ Y S + L+F++ GA L
Sbjct: 242 -SALSSAYGAAGSFVLVLLFVFYSAQILFFGAAL 274
>gi|317968038|ref|ZP_07969428.1| serum resistance locus BrkB-like protein [Synechococcus sp. CB0205]
Length = 301
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 93/281 (33%), Gaps = 19/281 (6%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVP 60
+ + + A + ED +++ + +L S FP ++ +AG +
Sbjct: 6 RRWRAIVKPFWKAYRLWDREDCVDLSAAFAYHSLQSFFPILLIALGVAGLVLGRMDGLAD 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI V P ++ +L+ L G I + S+N +L+ +R +
Sbjct: 66 QVIAVADQFLPPSALPLVSTTLLR-LYKQGTGAGLIGVIFLVISSTNAYLSLQRGADRLW 124
Query: 121 RV-----------VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
+ + R+ S V+L +V+ L R +
Sbjct: 125 GFRPILTPPENWKKPVWKFIRNRIESLVVVVLIGFFVVLDQITTNLRLLKPGSWRLLLES 184
Query: 170 LGNLLLIIWNGRIYATMLALFIGL-----IFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
L +W L + + + + F+P + + ++PG + +
Sbjct: 185 WLPAKLHLWAPVPLLVDLGISVIISCSLAFVLLAFMPTRRVPLRPLIPGSLLIGSALTAL 244
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ +++ Y + ++ ++++++ + G
Sbjct: 245 NLALGRSLISLGARFQAYGVIGGVLVLSLWVWLVALVVYYG 285
>gi|33239566|ref|NP_874508.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33237091|gb|AAP99160.1| Ribonuclease BN family protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 313
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 102/284 (35%), Gaps = 21/284 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
R +F ++ A + + D +++ + L S FP ++ ++A +
Sbjct: 6 RRHFNWFLRSLWYASQRWNRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGNQQGLD 65
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I + P + + +++++ G + A+ + N L+ +R
Sbjct: 66 QQIIGLASQVLPPSVVGLVETTLIKLV-NQGFGAGILGAMFLIITAGNAYLTLQRGADRL 124
Query: 120 YR--VVEMRSWYITRLISFGYVLLASVTLV-------------IMSFVFVAIPLALAYVR 164
+ + S R+ +F + + I S++ + ++
Sbjct: 125 WEDALPSKTSPIPLRMQAFRLIRNRIEAFLVVLLVGVLMVIDEISSYLRMIPGAVWTDLK 184
Query: 165 KFFPALGNLLL---IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
P L N L +I G++ + I + + +P + I ++PG I
Sbjct: 185 DNSPQLTNTLSKIPLIEVGQVIIPFMGFTIMALLLQALVPRRRVPIRPLIPGSIMIGTLL 244
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + I++ + Y ++ ++ ++++++G+ G
Sbjct: 245 TLLNSAVSRTILSLGSRFQAYGIISGVLVLTLWIWLVGLIIYFG 288
>gi|168703991|ref|ZP_02736268.1| hypothetical protein GobsU_30944 [Gemmata obscuriglobus UQM 2246]
Length = 282
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/250 (18%), Positives = 95/250 (38%), Gaps = 12/250 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIAKPITDEILQV 85
+++ ++ LS+ P ++ +AG + ++ A + I++
Sbjct: 1 LSAALAYYTTLSLSPLLLAVVAIAGLAYGPEAARGEIVAQFRDTIGVEAASFVEQLIIKS 60
Query: 86 LAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVVEMR------SWYITRLISFGY 138
+ + I A F ++GV + ++ +LN ++V S RL+SF
Sbjct: 61 SSKSDGIVAAIVAGGVLLFGASGVFSDMQSALNTIWKVPGHEVKGGILSIVKDRLLSFSL 120
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
V A+ L+ V + + V + P + L ++ + ALF +
Sbjct: 121 VCGAAFLLLTSLVVTAILAGINSRVAGWLPGMDALAQVVNFVFNFVLTAALF---AMIFK 177
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+LP + G T + + +G L Y+ + + Y + + LV++Y
Sbjct: 178 WLPETTLSWRDVGIGAAVTALLFSLGRYLIGLYLGK-AAVGSTYGAAGAFVVLLVWIYYS 236
Query: 259 GVFFILGAEL 268
+ + GAEL
Sbjct: 237 TMILLFGAEL 246
>gi|47459210|ref|YP_016072.1| hypothetical protein MMOB3750 [Mycoplasma mobile 163K]
gi|47458539|gb|AAT27861.1| conserved hypothetical membrane protein [Mycoplasma mobile 163K]
Length = 365
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/277 (15%), Positives = 99/277 (35%), Gaps = 14/277 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ + + ++ + + ++L ++ P + ++ F +F + + G
Sbjct: 83 ELVDNTYKKIQSKEFAFIPAGLALYLFMAFIPILTIVFSVFSF--NLEFTEILRTDILGR 140
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA--AYFSSNGVEALRISLNRAYRVVEMRS 127
I I I + G + L A + SSNG S + Y + +
Sbjct: 141 LIPGIESSI-PAIQEFFQSSTVGTVALIILLASSFWLSSNGFVKFIKSESLIYNFQNIEN 199
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
I R+ VL SV + ++ V + I L + I + +
Sbjct: 200 NLILRIKGILIVLGLSVFMSLVLLVVIPIVKILKE-NLLIQSPTTFFAIFYILSFILIIF 258
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI----SWVVGAVLFTHYIVTFSTYSTMYA 243
+ ++ + + P+ K K + PG I T I V+ L + ++ + +
Sbjct: 259 SSYVAFLLLFKLSPSFKLKFKDVSPGAIVTTIPTSLFIVIFGSLSSIDLINYGNF----G 314
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ + M ++ + L + G +NA+ + KK
Sbjct: 315 TIGTFMFLVILILQLSFYLYAGLIINAAYYQTFVGKK 351
>gi|152978026|ref|YP_001343655.1| ribonuclease BN [Actinobacillus succinogenes 130Z]
gi|171472942|sp|A6VL73|Y342_ACTSZ RecName: Full=UPF0761 membrane protein Asuc_0342
gi|150839749|gb|ABR73720.1| putative ribonuclease BN [Actinobacillus succinogenes 130Z]
Length = 287
Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 106/274 (38%), Gaps = 9/274 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ F ++ F + A ++ S +L++ P I+ ++ V
Sbjct: 1 MKTAFTPFASFGKIFLQRFGQNKLLLEAGALTYSTMLAIVPLIMVIFSIFSAFPIFNDVT 60
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V+ + +F + + + I Q + +K + + ++ + + ++ SLN
Sbjct: 61 GVLKEFIFTNFAPSASDVVGQYIDQFVQN-SKKMSAVGIISLIVVALMLINSIDNSLNGI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R + + + + L + V ++ L+L P LL
Sbjct: 120 WRTPKRGTLFSFAVYWTILTLGPIIMGVSIAISTYVTNLSLFRGELNLPFGIKLLG---- 175
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + ++ ++ +P K I G + + + +G F YI TF +Y
Sbjct: 176 ---FVPFILTWLSFTLIYAIVPNKKINIKHAAAGALVAAVFFTLGKKAFMWYITTFPSYQ 232
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y +A++ L++L + +F +LGA+L A +
Sbjct: 233 LIYGAMATLPLMLLWLQLSWLFILLGAQLAAVLD 266
>gi|284166479|ref|YP_003404758.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284016134|gb|ADB62085.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 278
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 87/271 (32%), Gaps = 17/271 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + + E + MA I+ +A LS+ P ++ +AG +G ++ +
Sbjct: 4 RRSYAVAREVVAVIDEHNVTFMAGSIAHAAFLSLLPLLLLLFLVAGAVGNEYLTEQLVAM 63
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + A G I ++ + + + + Y E
Sbjct: 64 ARDHLSPAGQGLVYEALTH--ASERGGASLIGLVSLLWGMLRIFRGVTTAFDELYADGEN 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
V+ +V ++ V + + I
Sbjct: 122 SFPEK--------VVNGAVVFAVILIATVGAGFGATTLASVDHPVVQAATPIG------L 167
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+AL I ++ P + LPG + WVV +F Y+ +
Sbjct: 168 FVALSIAFFPMYYVFPDPDVSVREALPGTLIAAGGWVVLETVFGIYVG-LVNTVGTFETF 226
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+++ L++LY + ++GA +N + +
Sbjct: 227 GAVILLLIWLYGNALILLVGAAVNVVIGGHR 257
>gi|309790243|ref|ZP_07684813.1| ribonuclease BN [Oscillochloris trichoides DG6]
gi|308227707|gb|EFO81365.1| ribonuclease BN [Oscillochloris trichoides DG6]
Length = 262
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 88/250 (35%), Gaps = 9/250 (3%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQ 84
++ + ++ AL S+FP I+ ++ G + Q ++ E + IT +
Sbjct: 1 MSLGASLAYYALFSLFPLILVILSIVGAVLDPQQFAVQQRILSLIGSEQVRGLITQTLQN 60
Query: 85 VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISFGYVLLA 142
L + G I + +S AL + + E + ++ L
Sbjct: 61 -LNSSSVGAGLIGFITLLMGASGIFGALEKAFAAIWETGAEESAGGILQTILKAVQQKLL 119
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLL----LIIWNGRIYATMLALFIGLIFVHL 198
+ LV+ S + + + + L L L + ++ L + +
Sbjct: 120 AFGLVLGSAFLMLLSIISTVLVTALSKLTTTLPGQALFWQVVQFSLSLALLSLAFATIFK 179
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
F+P K + + + + + + Y+ + Y Y + S+M + ++Y+
Sbjct: 180 FIPRCKVLWRDVWLAALISALLFTGLQKVVGIYLGQ-ANY-ASYGVVGSVMALMFWIYLS 237
Query: 259 GVFFILGAEL 268
+ +LG L
Sbjct: 238 SLVILLGGVL 247
>gi|331649343|ref|ZP_08350429.1| putative ribonuclease [Escherichia coli M605]
gi|331041841|gb|EGI13985.1| putative ribonuclease [Escherichia coli M605]
Length = 365
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 82 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 141
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 142 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 201
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 202 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 260
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 261 GVAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 319
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 320 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 360
>gi|281420162|ref|ZP_06251161.1| YihY family protein [Prevotella copri DSM 18205]
gi|281405962|gb|EFB36642.1| YihY family protein [Prevotella copri DSM 18205]
Length = 439
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 99/252 (39%), Gaps = 7/252 (2%)
Query: 19 FVEEDGWAM-ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
F +D WA + ++ ++ +++ PF+ +A G + + + F A P V+A+
Sbjct: 43 FYLKDMWARDVAALTFASFMALIPFMAMMFVIARGFGYASLLESWLSTTFEAQP-VVAQT 101
Query: 78 ITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I + + + + + + Y + ++ + ++ N + E RSW
Sbjct: 102 IVNFVHNYIENTQSNYIIGTGIVMFLYTIVSLMQKIELTFNDIWHTGE-RSWKQIVTEYP 160
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+ + ++ S + V + V + + I + A + +F+ +F
Sbjct: 161 TILFGLGLLILFASSINVWTVNMVDNVDRIADIGDTIPSFILH---LAAFVPMFLFFVFC 217
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ +P ++ S L + + + V S+Y+ +Y LA+I L++L
Sbjct: 218 YYVIPNTYIRVCSTLVPSFLAGVCMTALQYGYIYLQVFLSSYNVIYGSLAAIPLFLLWLQ 277
Query: 257 MLGVFFILGAEL 268
+ + GA L
Sbjct: 278 ISWAIVVFGALL 289
>gi|152993707|ref|YP_001359428.1| ribonuclease BN [Sulfurovum sp. NBC37-1]
gi|151425568|dbj|BAF73071.1| ribonuclease BN [Sulfurovum sp. NBC37-1]
Length = 271
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 102/266 (38%), Gaps = 12/266 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M++ F + + D + F+++ AS +S + + S+ P +V + L H+
Sbjct: 1 MKKIFGAYYIFLRDFFKDFLDDRLGYYASSLSWNTIFSIIPLLVILLYVFTTLPLFHEMY 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V ++F +K I + I +A + L + A + + ++ +N
Sbjct: 61 DKVQQLIFANLMPTQSKEIMEYINTFIAN-SDKLGIVGAFYVTFAAIMFFKSYDYIVNDI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + R + Y+LL + +M F L +Y+ + N + +
Sbjct: 120 FELP-SRGILKS---IKTYLLLIVLLPTMMGASFYLSTLIQSYLDR------NEITSAIH 169
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ + + + L + W + F Y++ TY+
Sbjct: 170 LYSVIPYIIIWSAFYIAYQLSANTTIRKRAALTSSFIASLIWYLSKSGFVFYVMHNKTYT 229
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
++Y +++++ L+++Y+ F+ G
Sbjct: 230 SVYGSISTVLFFLLWIYISWAIFLHG 255
>gi|170690518|ref|ZP_02881685.1| ribonuclease BN [Burkholderia graminis C4D1M]
gi|170144953|gb|EDT13114.1| ribonuclease BN [Burkholderia graminis C4D1M]
Length = 300
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 100/265 (37%), Gaps = 4/265 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
DA++ F G +A ++ ALLS+ P ++ + + + + +
Sbjct: 22 DALKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRIVPQHVLLSALGHLLQWLVPG 81
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR---VVEMRSWYI 130
+K + E+ LA A + + + +FSS L +++ + V+ R + +
Sbjct: 82 QSKALVHELANFLAHRAV-VGWVLFVTMLFFSSLAFTVLENAMSLIFVHRVVIRRRHFLL 140
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ L+ + Y+L V +I++ V + A F +L +
Sbjct: 141 SALLPYCYILFLGVGALIVTVVSSGLEAVGAAGIDLFGTYVSLQGASRVLLYLLGLAGEI 200
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L +++ +P + + L G I + W + + Y T S S +Y L +
Sbjct: 201 FVLTSIYMVMPVGRPSLKHALFGGIVAAVLWEITRHVLVWYFATLSQVSVVYGSLTMAIV 260
Query: 251 CLVFLYMLGVFFILGAELNASMIIY 275
L L L + GA++ A +
Sbjct: 261 ILFSLEWLATLLLFGAQVIAQYERF 285
>gi|297571823|ref|YP_003697597.1| ribonuclease BN [Arcanobacterium haemolyticum DSM 20595]
gi|296932170|gb|ADH92978.1| ribonuclease BN [Arcanobacterium haemolyticum DSM 20595]
Length = 414
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/262 (14%), Positives = 102/262 (38%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
A + G+ +A I+ SAL ++ + + G + T+ + V +
Sbjct: 17 FMRAYGRYGWARGYLLAGGIAYSALFAIAGALTIAFTAFSYTLGGNKELQQTLFETVNSS 76
Query: 70 WP-----EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + + + D ++ P IS L + +++ + ALRI++ Y +
Sbjct: 77 LPGILKLDGSSSGLLDPNDLIIENPINMASIISLLVLLWSAASLMTALRIAILGMYGITY 136
Query: 125 -MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGRI 182
R + +L+ L+ + ++ + V + G + +I+ G +
Sbjct: 137 LPRPFVKAKLLDLSGALMIGIGALVTVSLVTVSTQFSEIVLDWMGIPGVVGNYLIYIGTL 196
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L +F+ + A + ++ G + ++ + + +V+ + + +
Sbjct: 197 LIALLVDTGIFMFLFSVMCGAHPPLKDLVRGSLLAGVASSIL-RILGTTVVSSVSENALL 255
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A A+I+T L+++ +L ++
Sbjct: 256 APFAAIITLLIWVNLLAQVTLV 277
>gi|306835375|ref|ZP_07468396.1| multiple transmembrane domain protein [Corynebacterium accolens
ATCC 49726]
gi|304568741|gb|EFM44285.1| multiple transmembrane domain protein [Corynebacterium accolens
ATCC 49726]
Length = 359
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 100/263 (38%), Gaps = 11/263 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D + E + E G ++ I+ ++LS+FP + + A++ +++ +
Sbjct: 39 DHLMRMQERYAAEGGNQFSAGITYYSVLSIFPLAMLLVATIAAVLANR--EDLLNDLQSY 96
Query: 70 WPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--E 124
+ I +++ + ++L +F I L + + LRI ++ + + +
Sbjct: 97 ITDSIDGNLSESVNEILDTAIDQRGAMFGIGGLTTLWSGLGWMNHLRIGISAMWGIDAND 156
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL---LLIIWNGR 181
S+ + ++ V V+ V A L + + + +
Sbjct: 157 GGSFLKKKFSDLLGLIGLIVAFVVAFGVTAAGSSGLTQKVFDLLGIDSFPGMGYVFFFSG 216
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++A FI + ++ + LP K S G +++ L + I++ +T S
Sbjct: 217 LLLGLIANFIVMWWLIMILPRTKVPKKSGFIGAAIGAVAFEAIKQL-STVIMSSATGSPA 275
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A ++ ++ +Y++ +
Sbjct: 276 GAVFGPVIVLMIVMYLVWRVVLY 298
>gi|145225446|ref|YP_001136124.1| putative ribonuclease [Mycobacterium gilvum PYR-GCK]
gi|315445799|ref|YP_004078678.1| ribonuclease [Mycobacterium sp. Spyr1]
gi|145217932|gb|ABP47336.1| putative ribonuclease [Mycobacterium gilvum PYR-GCK]
gi|315264102|gb|ADU00844.1| ribonuclease, putative [Mycobacterium sp. Spyr1]
Length = 346
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 106/263 (40%), Gaps = 9/263 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
FD + A E + + G A+ I+ + ++FP ++ G ++AGF+ + + V + +
Sbjct: 27 FDHVMRAQERYKDSKGDFYAAGITYFTIFALFPLLMLGFSVAGFVLANQPELLQDVEERI 86
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--E 124
+ + + + ++ + I AA+ + LR +L++ + + E
Sbjct: 87 RSTFSGDLGQQLV-TLMDSAIESRGAVGLIGLATAAWAGLGWMANLREALSQMWGLFRGE 145
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA---YVRKFFPALGNLLLIIWNGR 181
+ T+L +L V +++ + +L R FP L +++
Sbjct: 146 TPGFVKTKLSDLVALLTTFVAIIVTLALSALGNSSLVENILTRIGFPDSPVLTVVLRASS 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
I ++L ++ ++ LP + S + + +++ V ++ + Y+ + T
Sbjct: 206 ITVSVLVSWLLFTWIIARLPRERVGFRSSVRAGLIAALAFEVFKLVASIYLRSVLTGPAG 265
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF Y+ +
Sbjct: 266 -ATFGPVLGLMVFAYITSRLILF 287
>gi|33863913|ref|NP_895473.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9313]
gi|33635497|emb|CAE21821.1| similar to serum resistance locus BrkB [Prochlorococcus marinus
str. MIT 9313]
Length = 314
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 106/274 (38%), Gaps = 21/274 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGA 69
++ A ++ D +++ + L S FP ++ ++A + Q ++D
Sbjct: 19 LWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGRQHGLDQQIVDFTAQV 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-------- 121
P + + +++++ G + A+ + N L+ +R +R
Sbjct: 79 LPPSVVGLVESTLVKLV-KQGFGAGLLGAVFLMVTAGNAYLTLQRGADRLWRDLLPLPST 137
Query: 122 ----VVEMRSWYITRLISFGYVLLASVTLV---IMSFVFVAIPLALAYVRKFFPALGNLL 174
VV++ + R+ +F V+L + +V I + + + + P L LL
Sbjct: 138 PAPFVVQLTRFLRARIEAFVVVILVGLLVVVDQISVNLRIIPGAVWDELIRTTPWLAALL 197
Query: 175 L---IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
++ G+ +L L + + LP+ + + ++PG + ++ +
Sbjct: 198 SRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGSFLIGTLLTILNLVVSRS 257
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
I++ T Y + ++ +++M+GV G
Sbjct: 258 ILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFG 291
>gi|89900459|ref|YP_522930.1| ribonuclease BN [Rhodoferax ferrireducens T118]
gi|89345196|gb|ABD69399.1| ribonuclease BN, putative [Rhodoferax ferrireducens T118]
Length = 326
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 108/270 (40%), Gaps = 6/270 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
Y ++++I ++ ++ + +M + ++ L S+ P ++ +AG F GA +
Sbjct: 5 YHKQIWNLINKSVAAWINDYAPSMGAALAYYTLFSMAPLLIIVIAVAGLFFGAEAARGEI 64
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
+ + G A + + L + +LA + V A L+ +L+R +R
Sbjct: 65 VAQIQGIIGWEGAVAVQGLLKSAREPAQDLLAALVSLATLLIGATTVFAELQSALDRIWR 124
Query: 122 VVE--MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
V + T L + + LV + V + + +A + K+ L + +
Sbjct: 125 VPASVKGNGLWTLLRTRLLSFGLVLGLVFLLLVSLVVSAMIAALGKWSDGLFQGWETVLH 184
Query: 180 GRIYATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ A+ + ++ +P A + G T + + +G L Y+ +
Sbjct: 185 LLTFGVSFAISTLLFAMIYKLMPRASIAWRDVWIGAAVTSLLFEIGKFLIGLYLGK-TGV 243
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ + S++ LV++Y F+LGAE
Sbjct: 244 ASSFGAAGSLVLLLVWVYFSAQIFLLGAEF 273
>gi|328953822|ref|YP_004371156.1| ribonuclease BN [Desulfobacca acetoxidans DSM 11109]
gi|328454146|gb|AEB09975.1| ribonuclease BN [Desulfobacca acetoxidans DSM 11109]
Length = 441
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/270 (13%), Positives = 95/270 (35%), Gaps = 11/270 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R Y I++ A + + + S ++ S++L++ P + + +G + +
Sbjct: 26 RPYVYAGLQILFLAGKDLLRKRALVRTSALAYSSILALIPLLALLFAIFKGIGLQRQLAA 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + V L + + + + N +
Sbjct: 86 HL---LPQLAGGSQDFARQILEYVEGTNVASLGVFGVIWLLVALMFLMANVEQAFNHIWG 142
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI---PLALAYVRKFFPALGNLLLIIW 178
+ RSW+ LL + + + + P +++ F P
Sbjct: 143 ISRSRSWWRKLSDYLSIFLLFPILMAVAISLTTTFQRHPEVQQFMKNFLPD-----AFFS 197
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +++G FV+L +P + + +S + G I W V +F + + Y
Sbjct: 198 AYNLLFSFGVVWLGFTFVYLVMPYTRVQFISAVLGGITGGALWQVAQWIFHLFQSSAPYY 257
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ +Y L ++ +++++ + + GAE+
Sbjct: 258 NAIYGALYQLLFLVIWMFWSWLIVLYGAEV 287
>gi|227502786|ref|ZP_03932835.1| ribonuclease [Corynebacterium accolens ATCC 49725]
gi|227076516|gb|EEI14479.1| ribonuclease [Corynebacterium accolens ATCC 49725]
Length = 358
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 100/263 (38%), Gaps = 11/263 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D + E + E G ++ I+ ++LS+FP + + A++ +++ +
Sbjct: 38 DHLMRMQERYAAEGGNQFSAGITYYSVLSIFPLAMLLVATIAAVLANR--EDLLNDLQSY 95
Query: 70 WPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--E 124
+ I +++ + ++L +F I L + + LRI ++ + + +
Sbjct: 96 ITDSIDGNLSESVNEILDKAIDQRGAMFGIGGLTTLWSGLGWMNHLRIGISAMWGIDAND 155
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL---LLIIWNGR 181
S+ + ++ V V+ V A L + + + +
Sbjct: 156 GGSFLKKKFSDLLGLIGLIVAFVVAFGVTAAGSSGLTQKVFDLLGIDSFPGMGYVFFFSG 215
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++A FI + ++ + LP K S G +++ L + I++ +T S
Sbjct: 216 LLLGLIANFIVMWWLIMILPRTKVPKKSGFIGAAIGAVAFEAIKQL-STVIMSSATGSPA 274
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A ++ ++ +Y++ +
Sbjct: 275 GAVFGPVIVLMIVMYLVWRVVLY 297
>gi|314923359|gb|EFS87190.1| putative ribonuclease [Propionibacterium acnes HL001PA1]
Length = 436
Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 95/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P I F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + +F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWVFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWSPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|314973417|gb|EFT17513.1| putative ribonuclease [Propionibacterium acnes HL053PA1]
Length = 436
Score = 80.7 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWDPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|124021942|ref|YP_001016249.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9303]
gi|123962228|gb|ABM76984.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9303]
Length = 314
Score = 80.3 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 105/274 (38%), Gaps = 21/274 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGA 69
++ A ++ D +++ + L S FP ++ ++A + Q ++D
Sbjct: 19 LWRAYLRWMRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGRQHGLDQQIVDFTAQV 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-------- 121
P + + +++++ G + A+ + N L+ +R +R
Sbjct: 79 LPPSVVGLVESTLVKLV-KQGFGAGLLGAVFLMVTAGNAYLTLQRGADRLWRDLLPLPST 137
Query: 122 ----VVEMRSWYITRLISFGYVLLASVTLV---IMSFVFVAIPLALAYVRKFFPALGNLL 174
VV++ + R+ +F V++ V +V I V + + P L LL
Sbjct: 138 PAPFVVQLTRFLRARIEAFVVVIMVGVLVVVDQISVNVRMIPGAVWDELISTTPWLAALL 197
Query: 175 L---IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
++ G+ +L L + + LP+ + + ++PG + ++ +
Sbjct: 198 SRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGSFLIGTLLTILNLVVSRS 257
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
I++ T Y + ++ +++M+GV G
Sbjct: 258 ILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFG 291
>gi|296120096|ref|ZP_06838650.1| putative ribonuclease [Corynebacterium ammoniagenes DSM 20306]
gi|295967250|gb|EFG80521.1| putative ribonuclease [Corynebacterium ammoniagenes DSM 20306]
Length = 359
Score = 80.3 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/265 (15%), Positives = 106/265 (40%), Gaps = 15/265 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D I + + G ++ ++ ++L++FP + + + + V D +
Sbjct: 39 DHIMRMQNRYAAQGGNQFSAGVTYYSVLAIFPLFMLMVAVVATVLANREDLLQQVQDAIT 98
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EM 125
GA + + I D ++ + +F ++ L + + LRI ++ + + E
Sbjct: 99 GAVEGDLGQTINDLLVTAID-QRAAMFGVAGLTTLWSGLGWMNNLRIGISAMWGLDANEG 157
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAI-----PLALAYVR-KFFPALGNLLLIIWN 179
++ + ++ + ++ V A P +V FP +G +I+
Sbjct: 158 GNFLKKKFNDLLGLIGLLIAFLVAFGVTAAGTSGIIPQIFDWVGIDHFPGMG---WVIFA 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ +LA F+ + ++ + LP K + S + G + ++ V L + I++ +T +
Sbjct: 215 LGLAVGLLANFLVMWWMIVILPRTKVPLKSGVKGALLGAVALEVIKQL-STVIISSATGN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
A ++ ++ +Y++ +
Sbjct: 274 PAGAVFGPVIVLMIMMYLIWRVVMY 298
>gi|186897334|ref|YP_001874446.1| ribonuclease [Yersinia pseudotuberculosis PB1/+]
gi|186700360|gb|ACC90989.1| ribonuclease [Yersinia pseudotuberculosis PB1/+]
Length = 360
Score = 80.3 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ + +
Sbjct: 51 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAMVGFVLASNPDLLAELINKIVNS 110
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 111 ISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNPQ 170
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+Y F ++ V L+I + A A + + L +
Sbjct: 171 DKEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLIA 230
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + V + T + ++ S
Sbjct: 231 LSISIAANYLLFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SPS 289
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 290 GAAFGSVIGLMAFFYFFARLTLFCA 314
>gi|111223692|ref|YP_714486.1| hypothetical protein FRAAL4293 [Frankia alni ACN14a]
gi|111151224|emb|CAJ62935.1| conserved hypothetical protein; putative membrane protein; putative
Ribonuclease BN domain [Frankia alni ACN14a]
Length = 366
Score = 80.3 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 102/263 (38%), Gaps = 20/263 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGAWPE 72
I F ++ G +A+ I+ A LS+FP ++ G G V+ +P
Sbjct: 23 VIYKFADDQGGYLAALITFYAFLSLFPLLLLLTTGLGFVLHGHPDLQEQVVTSTLSQFP- 81
Query: 73 VIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEM--RSW 128
I D++ V A+ G+ + A S GV A+ +L+ + V +
Sbjct: 82 ----IIGDQLRDDVQALKGSGIAVAVGVLGAISGSLGVARAIGNALDTVWAVPRRARPNP 137
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ RL S + L + +++ + L+ V A G L + +
Sbjct: 138 FFARLRSLSLIGLLGLGVLMTT--------VLSSVTTGASAFGRLAAGFQVLAVVISTAG 189
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST-MYAGLAS 247
++ L A ++ I PG +F + W + L ++YI ST +Y
Sbjct: 190 NAGLVLVAFKVLTARSVRVREIAPGAVFAALGWQLVQTLGSYYIAHQLKGSTQVYGLFGL 249
Query: 248 IMTCLVFLYMLGVFFILGAELNA 270
++ + +LY L V +L E+NA
Sbjct: 250 VLGLMTWLYFLAVVVVLAMEINA 272
>gi|239815207|ref|YP_002944117.1| ribonuclease BN [Variovorax paradoxus S110]
gi|239801784|gb|ACS18851.1| ribonuclease BN [Variovorax paradoxus S110]
Length = 303
Score = 80.3 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 103/273 (37%), Gaps = 14/273 (5%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
+FD+ A+ + + +M + ++ + S+ P ++ ++AG G +
Sbjct: 3 IRALFDLCKQAVASWSNDYAPSMGAALAYYTVFSIAPLLLIVISVAGLVFGQEAARGEIF 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYR 121
+ G A + + Q + PA+G+ + ++ L+ +L+R +R
Sbjct: 63 AQLSGLMGAQGAAAVQGML-QAVNKPAEGIVATVVGLGLLVVGATTVFGELQDALDRIWR 121
Query: 122 VVEMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ RL+SF ++ L++ A+ + F L
Sbjct: 122 APARTKSKGLFNLLRVRLLSFSMIMAIGFLLMVSLVASAALAALSKWWAPVFGGWATLAQ 181
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + + + ++ +P + + + G T + + +G L YI
Sbjct: 182 AVN---FVFSFAMVTVIFAMIYKIMPRVRVQWRDVWVGAAVTALLFTIGKHLIGLYIGK- 237
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S+ ++ Y S++ LV++Y F+LGAE
Sbjct: 238 SSVASGYGAAGSLVVVLVWVYYSAQIFLLGAEF 270
>gi|162421616|ref|YP_001608362.1| hypothetical protein YpAngola_A4075 [Yersinia pestis Angola]
gi|162354431|gb|ABX88379.1| ribonuclease BN-like family protein [Yersinia pestis Angola]
Length = 357
Score = 80.3 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 92/263 (34%), Gaps = 10/263 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ + +
Sbjct: 51 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFVMVGFVLASNPDLLAELINKIVNS 110
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 111 ISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNPQ 170
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+Y F ++ V L+I + A A + LG++ + +
Sbjct: 171 DKEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQAAIVNAL-GLGSIEWLRPAMTLI 229
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A +++ + LP K K ++L G + I + V + T + ++ S A
Sbjct: 230 ALSISIAANYLLFLWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SPSGA 288
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
S++ + F Y + A
Sbjct: 289 AFGSVIGLMAFFYFFARLTLFCA 311
>gi|312143543|ref|YP_003994989.1| ribonuclease BN [Halanaerobium sp. 'sapolanicus']
gi|311904194|gb|ADQ14635.1| ribonuclease BN [Halanaerobium sp. 'sapolanicus']
Length = 435
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 102/269 (37%), Gaps = 19/269 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I + E D A ++ ++L++ PF++F + + T+++ +
Sbjct: 28 FIIRVYQKSRENDILIQAMGMAYISILTIVPFLIFSFYIMTLFNFFGRLDTIVEQIKNVI 87
Query: 71 --------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
E + + I V + +S + F VE ++ N+ + V
Sbjct: 88 LNNLAAGTGETLINYLEIYIFNVDIEQLGAVSFLSLIILIVFMLARVE---VTFNQIWSV 144
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R + R ++F + + T +I + + LA Y+ P I+N
Sbjct: 145 REHRD-IVKRFVAF-WTFITLGTFLITLLLTATLVLAEQYLGLGMPGSRISESNIFN--- 199
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS--- 239
+ F+ I + F+P ++ + + +++ ++T Y +S
Sbjct: 200 WILFSFNFLVFIIAYYFIPNRDVDPLAATFAGLISGGLFILSKNIYTIYTRNLVVHSYER 259
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L I LV+LY++ + ++GA +
Sbjct: 260 QIYGSLYVIPFFLVWLYLIWLIVLIGAVI 288
>gi|51598115|ref|YP_072306.1| hypothetical protein YPTB3825 [Yersinia pseudotuberculosis IP
32953]
gi|51591397|emb|CAH23063.1| putative membrane protein [Yersinia pseudotuberculosis IP 32953]
Length = 360
Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ + +
Sbjct: 51 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAMVGFVLASNPDLLAELINKIVNS 110
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 111 ISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNPQ 170
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+Y F ++ V L+I + A A + + L +
Sbjct: 171 DKEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLIA 230
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + V + T + ++ S
Sbjct: 231 LSISIAANYLLFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SPS 289
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 290 GAAFGSVIGLMAFFYFFARLTLFCA 314
>gi|320354895|ref|YP_004196234.1| ribonuclease BN [Desulfobulbus propionicus DSM 2032]
gi|320123397|gb|ADW18943.1| ribonuclease BN [Desulfobulbus propionicus DSM 2032]
Length = 473
Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/319 (14%), Positives = 108/319 (33%), Gaps = 51/319 (15%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPTV 62
+F + ++ + F+ A+ ++ S LLS+ P + ++ G Q T+
Sbjct: 24 FFRLCARLLLIMHQEFIRTHLALRAAALTYSILLSLVPILALSTSILKGLGNDEQLKTTI 83
Query: 63 IDVVFGAWPEV----------------------------IAKPITDEILQVLA------- 87
+ + P + + PI+ + + +
Sbjct: 84 VRFIDQWEPPIRSEGGGDITATSPPSADVTITSGASNDRVPSPISTNLHRAVDLIFQYVD 143
Query: 88 -------VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ I + S + ++N + + RS ++R + L
Sbjct: 144 RTNFAALGIIGIIGLIGVIFLVLSS------IEEAMNAIWHTHKGRS--LSRKLMDYLGL 195
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L + L + + LA + + + + + + + L+ ++LF
Sbjct: 196 LLLLPLSLNVALAAEAILANERIMRQLSMIIPSAWMAALFFKLVPFMFIVLTLMIMYLFF 255
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P K + L G +F W V ++ + + Y+ +Y ASI L++L +
Sbjct: 256 PHTKVHSGAALTGALFASFFWFVFQKMYITLQIGVANYNAIYGSFASIPLFLIWLQIGWT 315
Query: 261 FFILGAELNASMIIYYWRK 279
F +LGA L ++ + +
Sbjct: 316 FILLGASLAYAIQHQHHYR 334
>gi|302524152|ref|ZP_07276494.1| predicted protein [Streptomyces sp. AA4]
gi|302433047|gb|EFL04863.1| predicted protein [Streptomyces sp. AA4]
Length = 337
Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 103/261 (39%), Gaps = 7/261 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVV 66
D + A + F E G A+ I+ ++LSVFP + + G + H + + +
Sbjct: 22 LDHLIRANDSFNENYGNHYAAAITYFSVLSVFPIFMVAFAIVGMVLGHNAAVIDQLTHGI 81
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ PE + + +I G+ L AAY + LR +L + +
Sbjct: 82 DSSVPEGLRGLVK-QITDAALKSGSGIGIFGLLLAAYSGVGWMANLRDALTAQWGQEKKT 140
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL---GNLLLIIWNGRIY 183
+++R I LL +++SF A L + L G ++ I
Sbjct: 141 EPFVSRTIKDLLSLLGLGLALVVSFAITAAGSGLGELLLKLVGLEGQGWAKFLLHVATIV 200
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+++A + ++V LP + S + G + + +VV + T Y+ + + S A
Sbjct: 201 LSLIANALVFLWVIARLPREHVALRSAVKGALIAAVGFVVLQQVATVYLASVTK-SPSAA 259
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
++ LVF ++ F +L
Sbjct: 260 IFGPVIGLLVFANLVSRFLLL 280
>gi|163755561|ref|ZP_02162680.1| probable ribonuclease [Kordia algicida OT-1]
gi|161324474|gb|EDP95804.1| probable ribonuclease [Kordia algicida OT-1]
Length = 296
Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/287 (15%), Positives = 111/287 (38%), Gaps = 10/287 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R + ++ + + + + ++ ++ ++LS+ IV N+ G + + V
Sbjct: 8 RFKLLDLPSLLVATSKSWFNSEPFERSAVVAYYSILSLPALIVIIINVVGSIWGKELVQG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRA 119
++ + A A+ I I+ + T + + S GV ++ +L++
Sbjct: 68 ELLAQIAKALGSETAESIRLMIVDRGETTTSIVATSIGIGTLIYGSTGVFFQVQNALDKI 127
Query: 120 YRVVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ +RL SFG++L+ L+I + A+ ++++ +L+
Sbjct: 128 WDAQPRFKNGLVETIFSRLKSFGFILIIGFLLLISFVLTSALSAFSENLKQYISP--SLV 185
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ I+ ++L +++ + LP A ++ G T + +V G L Y
Sbjct: 186 EYAFVLDIFVSLLMIYVLFAAMFKILPNASIPWKAVRIGAALTSLLFVGGKYLLALYFSE 245
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ Y +I+ ++++ + GA Y +K+P
Sbjct: 246 L-QPGSTYGAAGAIILVMLWVSYSSLILFFGAHFTKIYSEKYLKKQP 291
>gi|254820253|ref|ZP_05225254.1| hypothetical protein MintA_10011 [Mycobacterium intracellulare ATCC
13950]
Length = 345
Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 99/264 (37%), Gaps = 11/264 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + A + F E +G A+ ++ + ++FP ++ G + GF+ A + P ++ +
Sbjct: 20 LDHVIRAYQRFDERNGGFFAAGLTYYTIFALFPLLMVGFAVFGFVLARR--PHLLSTIDD 77
Query: 69 AWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-- 123
++ + +++ +++ + I + A + + LR +L +
Sbjct: 78 HIRSQVSGTLGNQLQELMNSAIDARTSVGVIGLVTAVWAGLGWISHLRQALTEMWWDSHV 137
Query: 124 EMRSWYITR---LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E + ++ L++ + V ++ V A P+A P + W
Sbjct: 138 ESPGFVRSKFSDLLAMVGTFAVILATVALTTVGHAAPMAALLKWLGVPQFAVFDWLFWLF 197
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
I L ++ ++ LP K + + + + + V + + Y+ T S
Sbjct: 198 SILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAVGFEVFKQVGSIYLKTVL-RSP 256
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF Y+ +
Sbjct: 257 AGAAFGPVLGLMVFAYITAYLVLF 280
>gi|327330313|gb|EGE72062.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
HL097PA1]
Length = 436
Score = 79.9 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPHLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|266625410|ref|ZP_06118345.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288862684|gb|EFC94982.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 127
Score = 79.5 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F ++ A+ S +++ FPFI+ + + ++ V+ P
Sbjct: 9 KQIYDKFSRDEMTVYAAQASFFTIIAAFPFIMLLMAMIQLIPTI-TKSNLLMVITNIVPA 67
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + + + +++A+AA + +S G+ ++ LNR + + R++ +TR
Sbjct: 68 NLKSLVFGIVENIYTNSPATVLSVTAIAAIWSASRGMLSIERGLNRVFGKRKKRNYVVTR 127
>gi|314981035|gb|EFT25129.1| putative ribonuclease [Propionibacterium acnes HL110PA3]
gi|315091864|gb|EFT63840.1| putative ribonuclease [Propionibacterium acnes HL110PA4]
gi|315093377|gb|EFT65353.1| putative ribonuclease [Propionibacterium acnes HL060PA1]
gi|327327532|gb|EGE69308.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
HL103PA1]
Length = 436
Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P I F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWSPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|314966706|gb|EFT10805.1| putative ribonuclease [Propionibacterium acnes HL082PA2]
Length = 436
Score = 79.5 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P I F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWSPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|315103367|gb|EFT75343.1| putative ribonuclease [Propionibacterium acnes HL050PA2]
Length = 436
Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P I F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWSPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|238809684|dbj|BAH69474.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 356
Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 96/267 (35%), Gaps = 9/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I + F ++ + + L+S P I L + + + I+ V
Sbjct: 83 ELINRTYKKFTDKSFVFIPLSTAFYFLVSFVPIITIMIVLLSLIPGYHTL--FINEVLTR 140
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ I L I LA+ + +S+G S N Y + +W+
Sbjct: 141 IIPGVTSIIKIPDTTKKGAQLTSLI-ILCLASLWMASSGFGKFIYSQNYIYGHENLGNWF 199
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ VL S+ L + + +++ Y + + + ++ L
Sbjct: 200 TNRIKGLFVVLGISIYLFLAAALYLFFYQTFTYNMSTYHKNIYFYITF----SFYLLIML 255
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ GL ++ P+ K ++ PGV+ T ++ +F + + Y Y + S M
Sbjct: 256 YFGLTLLYTMSPSFKLSWTTVFPGVLITSFPVMIFITIFGF-LTSLINYDK-YGIIGSFM 313
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
+F+ L F LG +N + Y
Sbjct: 314 YIALFVSFLTYFMFLGIIVNEAYYKTY 340
>gi|119899352|ref|YP_934565.1| exoribonuclease II [Azoarcus sp. BH72]
gi|119671765|emb|CAL95679.1| exoribonuclease II [Azoarcus sp. BH72]
Length = 314
Score = 79.5 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 109/286 (38%), Gaps = 12/286 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
M+ + + +++ + A+ ++ + SV P ++ ++ G LG
Sbjct: 1 MKTALRYWSGVAKTTVRLWLDAQVFVHAAALAFFTVFSVAPVVIVVVSIVGTVLGERAAQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNR 118
+ + + A + + + L T++ + A +++ ++ +LN
Sbjct: 61 GEIAEQLQSVIGAEAAAAVQTAVEGSRIERSGILPTLAGIGALLLGATSVFGQMQTALNA 120
Query: 119 AYRV--VEMRS----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+ V RS RL+S VL L++ + VA+ + + + + P G
Sbjct: 121 IWGVAPKPTRSSVWLLIKARLLSLTVVLAIGFVLLVSLLLSVAVQAVVTFAQDWLPIPGG 180
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
LL+ + + + LF + LP +L G T + + +G L Y+
Sbjct: 181 LLVGLDSVVSLVVVTLLFAT---IFRVLPDVVLGWRDVLLGAFATALLFSLGRGLIATYL 237
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
T +T ++ Y S++ L+++ + + GA + + R
Sbjct: 238 STTAT-ASTYGAAGSLVLLLMWVNYSSLILLFGAAFTRAHVEARGR 282
>gi|51246728|ref|YP_066612.1| ribonuclease BN [Desulfotalea psychrophila LSv54]
gi|50877765|emb|CAG37605.1| related to ribonuclease BN [Desulfotalea psychrophila LSv54]
Length = 410
Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/275 (14%), Positives = 92/275 (33%), Gaps = 25/275 (9%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV----IDVVFGAW 70
F + +S ++ + LLS+ P + + LG + V I + A
Sbjct: 29 TARGFKQNKLSLRSSALTYTTLLSLVPILAMSTAVVKGLGGGDQLRNVAYSYIQTLEKAS 88
Query: 71 PEVIA--------------KPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRIS 115
P + ++ + L + + +
Sbjct: 89 PAAAPTDQGSDKSTFTTHLRSAVKQVFDYVDRTNFATLGSFGMAGIILSVILVFSHIETA 148
Query: 116 LNRAYRVVEMRSWYITR--LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+N ++V RS ++ ++ S+ + + F+ P + + F P
Sbjct: 149 MNAIWKVHSSRSIMRKLSDYVTLLVLMPISINIAFAASAFLKSPTLNSKIDIFVPFAWLQ 208
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L+ + + + + L ++LF P K K + G + W ++ +
Sbjct: 209 TLLFQ----FIPVFFIALTLYVIYLFFPNTKVKNLPAALGALLAGSLWFFVQNIYIGLQI 264
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ +Y A++ L+++Y+ VF + GA+
Sbjct: 265 GVGNYNAIYGSFATVPLFLIWMYLGWVFILFGAQF 299
>gi|327405552|ref|YP_004346390.1| ribonuclease BN [Fluviicola taffensis DSM 16823]
gi|327321060|gb|AEA45552.1| ribonuclease BN [Fluviicola taffensis DSM 16823]
Length = 311
Score = 79.1 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 93/272 (34%), Gaps = 15/272 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFVPTVIDVV 66
V + F E + + ++ A+ ++ P I + + +G + + ++
Sbjct: 15 VLQLFKTTFVEFFGEKSFFHGAALAYYAVFAIIPIIYLAVISFGSIMGQEAILKLIKTLL 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEM 125
+ I D + +V + + I + A + SS + +LR+S+N Y +
Sbjct: 75 EEQVGMKDSSGILDFLSEVHFEKSSVILNIVGIIALMFSSSALISSLRMSINEFYDIHVK 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---------LI 176
R Y +L + V M VF + L F ++ L I
Sbjct: 135 ---IDDRKTQILYTILIKLGSVFMLAVFGISIVLLYTGETIFMSISGELYESLHLQQKWI 191
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + I V+ +L K L G + T VG + Y+ +
Sbjct: 192 MNLIEHLVAIGINTILFSIVYKYLHDGKVLWKLALSGGLLTSCLLYVGQIGLKFYLTKYF 251
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S M +++ L ++Y LGA+
Sbjct: 252 FGSQM-GIAGTLLIFLAWMYYSSQIIFLGAKF 282
>gi|296168848|ref|ZP_06850520.1| ribonuclease [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896465|gb|EFG76115.1| ribonuclease [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 342
Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 89/264 (33%), Gaps = 11/264 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD + A + F +G A+ ++ + ++FP ++ G GF+ P ++ +
Sbjct: 20 FDHVLRAYQRFDGRNGGFFAAGLTYYTIFALFPLLMVGFAAFGFV--LSRRPELLKTIAD 77
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYRVV-- 123
+ + D++L ++ ++ + A + + LR +L +
Sbjct: 78 HIRSQVTGALGDQLLDLMNSAIDARASVGVIGLATAVWAGLGWISHLRQALTEMWWEERI 137
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAI---PLALAYVRKFFPALGNLLLIIWNG 180
+ + ++ +L + + PL P G L W
Sbjct: 138 DSPGFVRNKVSDLLAMLGTFAVTMATVGLTTVGHDAPLRALLKWLGIPQFGVLDWFFWLL 197
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
I + ++ ++ LP K + + G + + + V + Y+ S
Sbjct: 198 SIVISTAVSWLLFAWMIARLPREKVSLADSMRGALIAAVGFEVFKQAGSLYLRAVL-RSP 256
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF Y+ +
Sbjct: 257 AGATFGPVLGLMVFAYITSYLVLF 280
>gi|320540132|ref|ZP_08039787.1| putative conserved inner membrane protein [Serratia symbiotica str.
Tucson]
gi|320029798|gb|EFW11822.1| putative conserved inner membrane protein [Serratia symbiotica str.
Tucson]
Length = 429
Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + G+
Sbjct: 151 LLRAAERFNDRLGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAKLINRIVGS 210
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y + + LR ++ R + R+
Sbjct: 211 ISDPTLASKLKNTVNTAIQQRTTVGLTGLVLALYSGISWMGNLREAIRAQSRDIWERNPQ 270
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
Y F ++ V L+I + A A + + L +
Sbjct: 271 DQEKVYFKYTRDFISLIGLVVALIITLSLTSIAGSAQAVIVNALGLDGIEWLRPAMTLIA 330
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + V + T + + S
Sbjct: 331 LSISVFANYLLFLWIFWMLPRHKPKKKALLRGTLLAAIGFEVIKFVMTMTLPQVAK-SPS 389
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 390 GAAFGSVIGLMAFFYFFARLTLFCAAWIATAQYQEDKTLP 429
>gi|329907332|ref|ZP_08274642.1| Ribonuclease BN [Oxalobacteraceae bacterium IMCC9480]
gi|327546993|gb|EGF31887.1| Ribonuclease BN [Oxalobacteraceae bacterium IMCC9480]
Length = 288
Score = 79.1 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 104/266 (39%), Gaps = 12/266 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGA 69
++ ++++ +M + ++ + S+ P ++ +LAG GA ++ + G
Sbjct: 9 LLNTTFTSWLDDYAPSMGAALAYYTMFSIAPLLLIVISLAGLVFGADAVRGEIVGQLSGM 68
Query: 70 WPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
E A+ I + V + + ++ L+ +LNR +RV +
Sbjct: 69 MGEAGARAIEGLLKSVSDPSDNIPATLLGLVLLLIGATTVFGELQDALNRIWRVPPRKVR 128
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
TRL+SFG +L L+I + A+ + F L ++ +
Sbjct: 129 SGLLEVLRTRLLSFGMILGIGFLLMISLVLSAALTALSRWWGPLFAQWETLASLVD---L 185
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ +P + +L G + T + +G L YI T S S+ +
Sbjct: 186 LLGLGMSTAVFALIYKLIPRMQVGWRDVLIGAVVTAFMFTLGKYLIGLYIGT-SGVSSAF 244
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
S++ LV++Y F+LGAE
Sbjct: 245 GAAGSLVVVLVWVYYSAQIFLLGAEF 270
>gi|302525685|ref|ZP_07278027.1| predicted protein [Streptomyces sp. AA4]
gi|302434580|gb|EFL06396.1| predicted protein [Streptomyces sp. AA4]
Length = 344
Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 101/262 (38%), Gaps = 9/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D I A +++ G+ + I+ +LLS+ P ++ ++ AGF+ A Q P ++D +
Sbjct: 25 LDHIARATNRYIDYGGYHYVASITYFSLLSLVPILMVASSAAGFVLATQ--PHLLDALVR 82
Query: 69 AWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PI ++ +L G+ + Y N + ALR +L Y
Sbjct: 83 GISGSLPGPIGSQVSSLLTGFVEQRTGVGVAGLVVGLYSGWNWMNALRDALTAMYGQNRS 142
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNGRI 182
+ ++ LL +++SF A+ + + ++ +
Sbjct: 143 EGPLLRTILMDVLALLGLAAALLVSFGISVSGTAVGRSLLGLVGVEDTSWGHNLLSFVSV 202
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+LA ++ ++V LP + S + G + + + + + Y+ S +
Sbjct: 203 PLALLADWLVFLWVLTRLPRERVGWRSAMRGAVAAAVGFELLKLAGGFYLNLISKSPSGV 262
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A S++ L F+ ++ I
Sbjct: 263 A-FGSVIGLLFFISLIARMLIY 283
>gi|313772220|gb|EFS38186.1| putative ribonuclease [Propionibacterium acnes HL074PA1]
gi|313807576|gb|EFS46063.1| putative ribonuclease [Propionibacterium acnes HL087PA2]
gi|313810085|gb|EFS47806.1| putative ribonuclease [Propionibacterium acnes HL083PA1]
gi|313820386|gb|EFS58100.1| putative ribonuclease [Propionibacterium acnes HL036PA1]
gi|313822810|gb|EFS60524.1| putative ribonuclease [Propionibacterium acnes HL036PA2]
gi|313825259|gb|EFS62973.1| putative ribonuclease [Propionibacterium acnes HL063PA1]
gi|313830415|gb|EFS68129.1| putative ribonuclease [Propionibacterium acnes HL007PA1]
gi|313833785|gb|EFS71499.1| putative ribonuclease [Propionibacterium acnes HL056PA1]
gi|314925273|gb|EFS89104.1| putative ribonuclease [Propionibacterium acnes HL036PA3]
gi|314959944|gb|EFT04046.1| putative ribonuclease [Propionibacterium acnes HL002PA2]
gi|314976096|gb|EFT20191.1| putative ribonuclease [Propionibacterium acnes HL045PA1]
gi|314978515|gb|EFT22609.1| putative ribonuclease [Propionibacterium acnes HL072PA2]
gi|314983884|gb|EFT27976.1| putative ribonuclease [Propionibacterium acnes HL005PA1]
gi|314988065|gb|EFT32156.1| putative ribonuclease [Propionibacterium acnes HL005PA2]
gi|314989873|gb|EFT33964.1| putative ribonuclease [Propionibacterium acnes HL005PA3]
gi|315084252|gb|EFT56228.1| putative ribonuclease [Propionibacterium acnes HL027PA2]
gi|315085597|gb|EFT57573.1| putative ribonuclease [Propionibacterium acnes HL002PA3]
gi|315088351|gb|EFT60327.1| putative ribonuclease [Propionibacterium acnes HL072PA1]
gi|315095962|gb|EFT67938.1| putative ribonuclease [Propionibacterium acnes HL038PA1]
gi|327326244|gb|EGE68034.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
HL096PA2]
gi|327331881|gb|EGE73618.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
HL096PA3]
gi|327445864|gb|EGE92518.1| putative ribonuclease [Propionibacterium acnes HL043PA2]
gi|327448153|gb|EGE94807.1| putative ribonuclease [Propionibacterium acnes HL043PA1]
gi|328753413|gb|EGF67029.1| putative ribonuclease [Propionibacterium acnes HL020PA1]
gi|328760796|gb|EGF74362.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
HL099PA1]
Length = 436
Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|182414380|ref|YP_001819446.1| ribonuclease BN [Opitutus terrae PB90-1]
gi|177841594|gb|ACB75846.1| ribonuclease BN [Opitutus terrae PB90-1]
Length = 541
Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 70/210 (33%), Gaps = 7/210 (3%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + + I Q + A + + + + + N + V R +
Sbjct: 172 PRLVQMMNNFINQGRSGSAGTVGFFGLVIIVLLL---FKTVEDTFNEIWGVRSGRG-VLM 227
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK---FFPALGNLLLIIWNGRIYATMLA 188
R++ + L L S ++ + P + ++ +
Sbjct: 228 RIVYYWTTLTLGAVLFFASVTLLSAGAFFSVFNNALADLPFSAQMAAMLQWSLPALSFTL 287
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + L + +P + S G I ++ L Y+ ++Y L
Sbjct: 288 VALLLTIFYRVIPHTRVFWRSAFTGAIVVAALLMLNHYLAFLYVRRVILTESLYGSLGLP 347
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + LY+ ++ ++G +++ ++ ++R
Sbjct: 348 LVMMFGLYIFWLYVLIGGQISYAVQNVHFR 377
>gi|327443083|gb|EGE89737.1| putative ribonuclease [Propionibacterium acnes HL013PA2]
Length = 436
Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFEM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|22127715|ref|NP_671138.1| hypothetical protein y3844 [Yersinia pestis KIM 10]
gi|45443097|ref|NP_994636.1| hypothetical protein YP_3348 [Yersinia pestis biovar Microtus str.
91001]
gi|108809804|ref|YP_653720.1| hypothetical protein YPA_3813 [Yersinia pestis Antiqua]
gi|108813795|ref|YP_649562.1| hypothetical protein YPN_3635 [Yersinia pestis Nepal516]
gi|145600603|ref|YP_001164679.1| hypothetical protein YPDSF_3351 [Yersinia pestis Pestoides F]
gi|150261059|ref|ZP_01917787.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|165926990|ref|ZP_02222822.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936966|ref|ZP_02225532.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166009533|ref|ZP_02230431.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213438|ref|ZP_02239473.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167400543|ref|ZP_02306052.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167420968|ref|ZP_02312721.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426638|ref|ZP_02318391.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167467308|ref|ZP_02332012.1| membrane protein [Yersinia pestis FV-1]
gi|218930980|ref|YP_002348855.1| hypothetical protein YPO3985 [Yersinia pestis CO92]
gi|229836434|ref|ZP_04456601.1| conserved inner membrane protein [Yersinia pestis Pestoides A]
gi|229839686|ref|ZP_04459845.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229841769|ref|ZP_04461925.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904307|ref|ZP_04519418.1| conserved inner membrane protein [Yersinia pestis Nepal516]
gi|270488085|ref|ZP_06205159.1| putative ribonuclease [Yersinia pestis KIM D27]
gi|294504290|ref|YP_003568352.1| hypothetical protein YPZ3_2180 [Yersinia pestis Z176003]
gi|21960836|gb|AAM87389.1|AE013988_3 hypothetical protein y3844 [Yersinia pestis KIM 10]
gi|45437964|gb|AAS63513.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|108777443|gb|ABG19962.1| membrane protein [Yersinia pestis Nepal516]
gi|108781717|gb|ABG15775.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115349591|emb|CAL22565.1| putative membrane protein [Yersinia pestis CO92]
gi|145212299|gb|ABP41706.1| membrane protein [Yersinia pestis Pestoides F]
gi|149290467|gb|EDM40544.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|165915208|gb|EDR33819.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165921096|gb|EDR38320.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165991455|gb|EDR43756.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205379|gb|EDR49859.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166961097|gb|EDR57118.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049911|gb|EDR61319.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167054413|gb|EDR64229.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229678425|gb|EEO74530.1| conserved inner membrane protein [Yersinia pestis Nepal516]
gi|229691108|gb|EEO83161.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696052|gb|EEO86099.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706502|gb|EEO92509.1| conserved inner membrane protein [Yersinia pestis Pestoides A]
gi|262363689|gb|ACY60410.1| hypothetical protein YPD4_3506 [Yersinia pestis D106004]
gi|270336589|gb|EFA47366.1| putative ribonuclease [Yersinia pestis KIM D27]
gi|294354749|gb|ADE65090.1| hypothetical protein YPZ3_2180 [Yersinia pestis Z176003]
gi|320017314|gb|ADW00886.1| conserved inner membrane protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 360
Score = 78.7 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ + +
Sbjct: 51 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFVMVGFVLASNPDLLAELINKIVNS 110
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 111 ISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNPQ 170
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGR 181
+Y F ++ V L+I + A A + + L +
Sbjct: 171 DKEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQAAIVNALGLGSIEWLRPAMTLIA 230
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + V + T + ++ S
Sbjct: 231 LSISIAANYLLFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SPS 289
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 290 GAAFGSVIGLMAFFYFFARLTLFCA 314
>gi|315108622|gb|EFT80598.1| putative ribonuclease [Propionibacterium acnes HL030PA2]
Length = 436
Score = 78.7 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 94/266 (35%), Gaps = 15/266 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A F G A+ I+ +L++ P + F + G + + P V++ V +
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLV-LSRLSPYVLNQVVDSVV 93
Query: 72 EVIAKP-----ITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR---- 121
+ + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 122 -VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIW 178
V + R + +L L + ++ + ++ ++ L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFIL 264
+ SI+ ++ ++ +
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILF 298
>gi|307725727|ref|YP_003908940.1| ribonuclease BN [Burkholderia sp. CCGE1003]
gi|307586252|gb|ADN59649.1| ribonuclease BN [Burkholderia sp. CCGE1003]
Length = 300
Score = 78.7 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 97/265 (36%), Gaps = 4/265 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ ++ F G +A ++ ALLS+ P ++ + + + +
Sbjct: 22 ETLKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRVVPQHLLLPALGHLLQWLVPG 81
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMRSWYI 130
++ + E+ LA A + + + +FSS L +++ + R + +
Sbjct: 82 QSRALVQELANFLAHRAV-IGWVLFVTMLFFSSLAFTVLENAMSLIFVHRVAIRRRHFLL 140
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ L+ + Y+L V +I++ V + A FF +L +
Sbjct: 141 SALLPYCYILFLGVGALIVTVVSSGLEAVGAEGFDFFGTYVSLQGPSRVLLYLLGLAGEI 200
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L +++ +P + I L G I + W + + Y T S S +Y L +
Sbjct: 201 FVLTSIYMVMPVGRPSIRHALFGGIVAAVLWEITRHVLVWYFATLSQVSVVYGSLTMAIV 260
Query: 251 CLVFLYMLGVFFILGAELNASMIIY 275
L L L + GA++ A +
Sbjct: 261 ILFSLEWLATLLLFGAQVIAQYERF 285
>gi|313812885|gb|EFS50599.1| putative ribonuclease [Propionibacterium acnes HL025PA1]
Length = 436
Score = 78.7 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|314967891|gb|EFT11990.1| putative ribonuclease [Propionibacterium acnes HL037PA1]
gi|315105592|gb|EFT77568.1| putative ribonuclease [Propionibacterium acnes HL030PA1]
Length = 436
Score = 78.7 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|313818617|gb|EFS56331.1| putative ribonuclease [Propionibacterium acnes HL046PA2]
Length = 436
Score = 78.7 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|313827548|gb|EFS65262.1| putative ribonuclease [Propionibacterium acnes HL063PA2]
Length = 436
Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|313837071|gb|EFS74785.1| putative ribonuclease [Propionibacterium acnes HL037PA2]
gi|314927900|gb|EFS91731.1| putative ribonuclease [Propionibacterium acnes HL044PA1]
gi|314971844|gb|EFT15942.1| putative ribonuclease [Propionibacterium acnes HL037PA3]
gi|328907359|gb|EGG27125.1| putative ribonuclease [Propionibacterium sp. P08]
Length = 417
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 99/267 (37%), Gaps = 17/267 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A F G A+ I+ +L++ P I F L G + + P +++ V +
Sbjct: 17 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFALLGLV-LSRLSPYLLNQVVDSVV 75
Query: 72 EVIAKP-----ITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR---- 121
+ +P I I + + F +S L A + V +R + +
Sbjct: 76 SLATEPSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 135
Query: 122 -VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + R + + +S L + + +++ + I +LA + L ++ W
Sbjct: 136 MVADDRGFVRAK-VSDMLAFLGLLLVTLLTIITSQIGSSLAGMLARRTGLDSVPGHGWLL 194
Query: 181 RIYATM---LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 195 TLAGLLATTIAGWLLFIFLYTVMPRVKTSWRPILKGSLVAGFALALVQVG-AGYLVQAFN 253
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ SI+ ++ ++ +
Sbjct: 254 SNKAVQAFGSIIIVMLVFDLVARLILF 280
>gi|313792084|gb|EFS40185.1| putative ribonuclease [Propionibacterium acnes HL110PA1]
gi|313801964|gb|EFS43198.1| putative ribonuclease [Propionibacterium acnes HL110PA2]
gi|313838790|gb|EFS76504.1| putative ribonuclease [Propionibacterium acnes HL086PA1]
gi|315077958|gb|EFT50009.1| putative ribonuclease [Propionibacterium acnes HL053PA2]
gi|327453198|gb|EGE99852.1| putative ribonuclease [Propionibacterium acnes HL092PA1]
Length = 436
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|289580689|ref|YP_003479155.1| ribonuclease BN [Natrialba magadii ATCC 43099]
gi|289530242|gb|ADD04593.1| ribonuclease BN [Natrialba magadii ATCC 43099]
Length = 301
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 89/250 (35%), Gaps = 7/250 (2%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ A+ ++ A ++ P ++ + A + + I+ G + +
Sbjct: 36 KRQISVTAAGLAYHAFNTLVPLVILLLVGMSLVDALEPLLETIEEAAGLEGMLTSDASEV 95
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ + G+ ++ L + + +A+ + Y + +S+ + +
Sbjct: 96 TGGAGIDLARAGVLALAIL--LWSGARLFQAVNSAFTDIYGSRKDQSYVGSAVTVTIVTA 153
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ L + + VA+ + F + + F ++
Sbjct: 154 FNTALLTVTVALGVALISIVGVSASVFLGGVAAAAVSSVVLLVLLTALFFP----MYYLF 209
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P A +LPG F +SW V A+ F Y+ T S ++ +I+ L ++Y G
Sbjct: 210 PQADVSAREVLPGTAFAALSWTVLALGFRLYVAT-SESVALFGIAGAILLILTWVYFGGF 268
Query: 261 FFILGAELNA 270
+LGA LNA
Sbjct: 269 CLLLGAILNA 278
>gi|92119385|ref|YP_579114.1| ribonuclease BN, putative [Nitrobacter hamburgensis X14]
gi|91802279|gb|ABE64654.1| ribonuclease BN, putative [Nitrobacter hamburgensis X14]
Length = 301
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/280 (13%), Positives = 102/280 (36%), Gaps = 6/280 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFG-ANLAGFLGAHQFVP 60
R+ F I+ F G +A ++ LLS+ P ++ L+ + + +
Sbjct: 9 RKIFKQPGAFALAVIKQFRANQGVLLAGAVAYYTLLSLVPLLILILMALSHIVPEDRLLS 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T+ + + P A + + + G I + +FS+ L +++ +
Sbjct: 69 TLSEYLEFVVPGQSAALVQEVRTFLAQKQVVG--GILFVTMLFFSALAFTILENAMSVIF 126
Query: 121 RVV---EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ R + ++ ++ + ++L + L+I++ + +L I
Sbjct: 127 YHRVKIKRRHFLVSAVMPYLFILFLGIGLLIVTVLSGVFQFLGTRSIVLLGQTRSLDQIS 186
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
++ + + ++ +P + + + G + + W + + Y T S
Sbjct: 187 MFFLYVIGVIGEMLLITAIYFVMPVGRLSLRHAMIGGVMAALLWELTRHILAWYYTTMSQ 246
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+Y L + + L+ + + + ++GA++ A
Sbjct: 247 IQLVYGSLTTAIAVLLSVEIGALILLIGAQVIAEYERVSR 286
>gi|314962741|gb|EFT06841.1| putative ribonuclease [Propionibacterium acnes HL082PA1]
Length = 436
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|284044882|ref|YP_003395222.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283949103|gb|ADB51847.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 320
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 98/270 (36%), Gaps = 22/270 (8%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
++ F ++ +A+ I+ S+FP ++ + G++ G ++ ++D G +P
Sbjct: 26 VVKKFSDDQAGHLAALIAYYGFFSIFPLLLVLVTVLGYVLAGNQEWYDRIVDSTLGQFP- 84
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYI 130
I ++I I +L A + A + ++++ + + E R ++
Sbjct: 85 ----VIGEDIQIGALRGDTAALVIGSLGALWAGLGVTLAAQRAMDQVWDIPHRERRDFF- 139
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+A + +++ V A+ +A+ + + + +G T+L
Sbjct: 140 ----------MARLRGLLVLGVLGALNIAITVGVGLLVGGLDSVGVKASG-FALTLLLDV 188
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY-STMYAGLASIM 249
L + + G+ + W L Y+ S Y A ++
Sbjct: 189 GLFWASFRLLTHKEIPTRDLWMGIFLAAVGWAALQTLGAIYVNKVVARASATYGFFAIVI 248
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +LY+ G + AE N + W +
Sbjct: 249 GLLSWLYLGGQILLYAAEANVVRVRRLWPR 278
>gi|325972595|ref|YP_004248786.1| ribonuclease BN [Spirochaeta sp. Buddy]
gi|324027833|gb|ADY14592.1| ribonuclease BN [Spirochaeta sp. Buddy]
Length = 413
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 94/267 (35%), Gaps = 5/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + +++D AS + S LL++ P + F LG + +
Sbjct: 8 QQNLKRLGKFFSIVFRQAMKDDILNAASGLVYSTLLAIVPALTFMFTFFKALGVLEPLTD 67
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ G A +L A L + ++ + + ++NR YR
Sbjct: 68 FLSQWLGELAGSQAGGELMLLLDRYTRNATSLGVVGLVSFLITMVLLINKVWSAINRIYR 127
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R+ + L +L++ ++V V +A Y+ ++G ++ R
Sbjct: 128 SSRSRNPLKR--FAGYVTFLIIASLLLAAYVSVQSVMASWYLDLLGVSIGRWSSVL---R 182
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L + I L + F+P K + + G + + + + T + +S +
Sbjct: 183 TLAPSLIVAIILFLLIYFVPNTKVRFDAAFLGSLAGVVFIGIFSKFTTILTAMATNFSVI 242
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A++ L F Y+ EL
Sbjct: 243 YGSFAAVFLFLFFCYVFWATVFFSVEL 269
>gi|257054599|ref|YP_003132431.1| ribonuclease, putative [Saccharomonospora viridis DSM 43017]
gi|256584471|gb|ACU95604.1| ribonuclease, putative [Saccharomonospora viridis DSM 43017]
Length = 366
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 106/262 (40%), Gaps = 9/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
D + A E F E G A+ I+ ++LS+ P ++ G ++AGF+ G + + + +
Sbjct: 50 LDHVIRANEAFTERFGNHYAAAITYFSVLSLVPLLMVGFSVAGFVLAGNDVAMRQLREGI 109
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ PE + T + L G + L A Y + LR +L + + +
Sbjct: 110 VNSAPEGLGGLFTSIVQAALD-SRAGAGILGLLLALYSGLGWMGNLRDALTVQWGQEKPK 168
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ T++ G + V L + + ++ + L + + R+
Sbjct: 169 LPFLSTKVKDLGALAGLGVALAVSFGLTAVGSGLGEFLLELM-GLEDAAWARFLLRLGTI 227
Query: 186 MLAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+LAL + ++V +LP K + + + G + + + V + Y+ + + S
Sbjct: 228 VLALAANVLVFLWVLAWLPRKKVAVRNAVRGAVLAAVGFEVLKQVGGVYLSSVLS-SPSG 286
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A S++ LVF ++ F +
Sbjct: 287 ALFGSVIGLLVFANLVARFLLF 308
>gi|307824393|ref|ZP_07654618.1| ribonuclease BN [Methylobacter tundripaludum SV96]
gi|307734377|gb|EFO05229.1| ribonuclease BN [Methylobacter tundripaludum SV96]
Length = 314
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/286 (15%), Positives = 108/286 (37%), Gaps = 10/286 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPT 61
+ + ++ ++ ++ + + ++ L S+ P +V +AG F GA
Sbjct: 23 KGLRCGYVLLSPSLTAWLAHRAASKGAAVAFYTLFSMTPILVLTIAVAGYFFGAEAAQGE 82
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAY 120
+ + A+ I + + + + I+ L +++ L+ SL+ +
Sbjct: 83 ITVQMQALVGPNGAQAINAVLAAARNSESGIVASAIATLLLLLGATSVFVELKDSLDEMW 142
Query: 121 RVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ ++ TR++ FG VL+ + L++ + A+ + YV F L
Sbjct: 143 GTDKPQASSLSVLLKTRVLCFGLVLVLAFLLLVSLVISAALAVLQQYV--FGGLWSLAAL 200
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ + + ++ LP A G +FT + + +G Y+
Sbjct: 201 VLSPLVSLISFGVIASLFAVIYKMLPEAPLAWQDAWFGALFTALLFSLGKYGIGVYLGN- 259
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S ++ + S++ L+++Y F GAE + + +P
Sbjct: 260 SGVTSSFGAAGSVIALLLWVYYSAQIFFFGAEFTRQFALRFGSLRP 305
>gi|41409550|ref|NP_962386.1| hypothetical protein MAP3452c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398381|gb|AAS06002.1| hypothetical protein MAP_3452c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 342
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 96/264 (36%), Gaps = 11/264 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + A + F + +G A+ ++ + ++FP ++ G + GF+ A + P ++ +
Sbjct: 20 LDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAVFGFVLARR--PQLLSSIDD 77
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYRVV-- 123
+ + +++ +++ ++ + A + + LR +L +
Sbjct: 78 HIRSQVNGALGNQLQELMNSAIDARTSVGVIGLATAVWAGLGWISHLRQALTEMWWDTQI 137
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E + +L ++ +V + A + + ++ W I+
Sbjct: 138 ESPGFVRNKLSDLLAMVGTFAVIVATVGLTTVGHAAPMAALLKWLGIPQFVVFDWLFWIF 197
Query: 184 ATMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++A + + LP K + + + I + V + + Y+ T S
Sbjct: 198 SILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAIGFEVFKQVASIYLRTVL-RSP 256
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF Y+ +
Sbjct: 257 AGAAFGPVLGLMVFAYITAYLVLF 280
>gi|256020869|ref|ZP_05434734.1| conserved inner membrane protein [Shigella sp. D9]
gi|332282083|ref|ZP_08394496.1| conserved hypothetical protein [Shigella sp. D9]
gi|332104435|gb|EGJ07781.1| conserved hypothetical protein [Shigella sp. D9]
Length = 344
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|315080583|gb|EFT52559.1| putative ribonuclease [Propionibacterium acnes HL078PA1]
Length = 436
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + +D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQAVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|288550287|ref|ZP_05969860.2| putative ribonuclease [Enterobacter cancerogenus ATCC 35316]
gi|288315917|gb|EFC54855.1| putative ribonuclease [Enterobacter cancerogenus ATCC 35316]
Length = 343
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 99/280 (35%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + + +
Sbjct: 60 LIRAAERFNDRMGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIFNKILTN 119
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + L A Y N + LR ++ R V R+
Sbjct: 120 VSDQTLATTLKSTINTAVQQRTTVGIVGLLIALYSGVNWMGNLREAIRAQSRDVWERTPQ 179
Query: 128 ----WYITRLISFGYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR- 181
++ F ++ V LV+ +S VA + + + L W G
Sbjct: 180 DQEKIWVKYFRDFISLIGLLVALVVTLSITSVAGSAQQMIISALYLDYIDWLKPAWRGIG 239
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G + + V ++ T+ + + S
Sbjct: 240 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAVGFEVIKIVMTYTLPSLVK-SPS 298
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 299 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 338
>gi|222478698|ref|YP_002564935.1| ribonuclease BN [Halorubrum lacusprofundi ATCC 49239]
gi|222451600|gb|ACM55865.1| ribonuclease BN [Halorubrum lacusprofundi ATCC 49239]
Length = 270
Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 94/271 (34%), Gaps = 20/271 (7%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ + E D A+ ++ A +S P ++ + Q V +
Sbjct: 2 KRLGHAVEVALTVGQMAREHDIKYPAAALAYYAFVSQVPLLILVLAVVS----DQLVGQI 57
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +++ ++ L + L + +N V + +NR
Sbjct: 58 QTTTPDFLTPGAQQLLSEALVTASGRTWAALLAVGVL--VWSGANIVIGFQTVVNRVENT 115
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R + T+L G ++ S LVI++ + + AL V + +
Sbjct: 116 P--RESFRTQLHDAG-SIIGSFGLVILAVILTNVIFALLPVGRVLSYSKPFVQ------- 165
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L I + ++ S + LPG + + W V + Y + Y +Y
Sbjct: 166 ---FGTLTIAFLPLYYAPSRLVSSLTEALPGALTAAVGWTVLLTAVSFYAANATQY-ALY 221
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
L+ I+ L Y+ + ++GA +NA +
Sbjct: 222 GVLSGIIIILTSFYLGAIILMIGAIVNAVIA 252
>gi|91778791|ref|YP_553999.1| ribonuclease BN [Burkholderia xenovorans LB400]
gi|91691451|gb|ABE34649.1| Ribonuclease BN [Burkholderia xenovorans LB400]
Length = 300
Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 97/261 (37%), Gaps = 4/261 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ I+ F G +A ++ ALLS+ P ++ + + T + +
Sbjct: 19 FLLQTIKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRVVPQHVLLTALAHLLQWL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS--- 127
+ + E+ LA A + + L +FSS L +++ + +
Sbjct: 79 VPGQSNALVRELANFLAHRAV-IGWVLLLTMIFFSSLAFTVLENAMSIIFVHRVVVRRRH 137
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ ++ ++ + Y+L V L+I++FV + A F +L + +
Sbjct: 138 FLLSAMLPYCYILFLGVGLLIVTFVSSGLEAIGAEGMDLFGLHVSLQGLSRAVLYLLGLA 197
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L ++L +P + + L G + + W + + Y T S S +Y L
Sbjct: 198 GEVFVLTSIYLVMPVGRPSLKHALFGGVVAAVLWEITRHVLVWYFATLSQVSVVYGSLTM 257
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
+ L L L + GA++
Sbjct: 258 AIVILFSLEWLATLLLFGAQV 278
>gi|329295670|ref|ZP_08253006.1| ribonuclease [Plautia stali symbiont]
Length = 333
Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 96/266 (36%), Gaps = 13/266 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
A+E F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 49 FLRALERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLSELINKIVNS 108
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ L + L A Y N + LR ++ R V R+
Sbjct: 109 ISDPTLATTLKNTLNTAIQQRATVGLTGLLLALYSGINWMGNLREAVRAQSRDVWERTPD 168
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
W+ L +L + LVI + A A + LG++ + I
Sbjct: 169 DQEKWWKKYLRDLVSLLGLMLALVITLSLTSIAGAAQAAIVNAL-GLGDIEWLRPAMTII 227
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A L++F + +++ LP K + ++L G + I + V + T + +T S
Sbjct: 228 ALSLSIFANYLLFLWIFWILPRHKPRKKALLRGTLLAAIGFEVIKFVMTLTLPKLAT-SP 286
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 287 SGAAFGSVLGLMAFFYFFARLTLFCA 312
>gi|282853962|ref|ZP_06263299.1| putative ribonuclease [Propionibacterium acnes J139]
gi|282583415|gb|EFB88795.1| putative ribonuclease [Propionibacterium acnes J139]
Length = 418
Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P I F + G + + + V+D V G
Sbjct: 17 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFAVLGLVLSRLSPYLLNQVVDSVVG 76
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 77 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 137 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 196
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 197 AGLVATTIAGWLLFIFLYTVMPRVKTSWSPILKGSLAAGFALALVQVG-AGYLVRAFNSN 255
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 256 KAVQAFGSIIIVMLVFDLVARLILF 280
>gi|281180560|dbj|BAI56890.1| conserved hypothetical protein [Escherichia coli SE15]
gi|330909577|gb|EGH38091.1| inner membrane protein YhjD [Escherichia coli AA86]
Length = 337
Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GVAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|239979865|ref|ZP_04702389.1| integral membrane protein [Streptomyces albus J1074]
gi|291451722|ref|ZP_06591112.1| membrane protein [Streptomyces albus J1074]
gi|291354671|gb|EFE81573.1| membrane protein [Streptomyces albus J1074]
Length = 324
Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/264 (15%), Positives = 96/264 (36%), Gaps = 10/264 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ E +A+ ++ + L++FP + A +A + + + D + P
Sbjct: 22 LWRTYETLDRTRWSQLAAAMTYISFLALFPLLTLVAAVAASTLSRERQRELQDQLAEQVP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVE-MRSWY 129
I+D++ V G ++ A A F+ G V ++R L + + +
Sbjct: 82 G-----ISDQLDIASLVDNAGTVSLIAGALLLFTGVGWVGSIRDCLRAVWELPALEGNPV 136
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L ++ A AL ++ + + + + L
Sbjct: 137 ARKAKDVIVLLGLGAAGIVSLVASTAGGSALGWIARQIGLAETGVGTVLLRAAAFALAVL 196
Query: 190 --FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
F+ L++V LPA + ++L + + + + +L YI + S MY
Sbjct: 197 AGFLVLLYVLTLLPAVHPRRRALLGAALIGAVGFELLKLLLGGYISGVAAKS-MYGAFGV 255
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ ++ A A+
Sbjct: 256 PIALLLWINFTAKLVLVCAAWTAT 279
>gi|332880145|ref|ZP_08447827.1| YihY family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332681904|gb|EGJ54819.1| YihY family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 437
Score = 78.0 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 105/283 (37%), Gaps = 11/283 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++Y + E ++ + + AS ++ S +L+ P + + LG +
Sbjct: 28 KKYAFNALRKLVLTAECYLSKHLNSHASALTYSTILATVPILAIIFAIGRGLGYGSIIEE 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + A + + I L + L Y + I+LN +
Sbjct: 88 KIKSNLSVN-QQFADMVLNFINSYLEHTQSGIFIGFGLLLLLYTVVQLTANIEIALNSIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V RS Y LL + ++I S + + LA + + +P L +
Sbjct: 147 NVKNQRSIYRQITDYISVFLLLPILIIISSGLSIF----LATIAQDYPNFMVLSTTVKIL 202
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + +++++P + + ILPG ++ + H + S+Y+
Sbjct: 203 IKLSPYALSGLLFTALYMYMPNTDIRFRNAILPG-FIAGTAFQFLQYFYIHSQIWVSSYN 261
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL---NASMIIYYWRK 279
+Y A++ ++++ + + GA+L N ++ YY+ K
Sbjct: 262 AIYGSFAALPMFMLWVNFSWIICLFGAQLSYANQNLRSYYYIK 304
>gi|116071444|ref|ZP_01468713.1| serum resistance locus BrkB-like protein [Synechococcus sp. BL107]
gi|116066849|gb|EAU72606.1| serum resistance locus BrkB-like protein [Synechococcus sp. BL107]
Length = 313
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/303 (15%), Positives = 114/303 (37%), Gaps = 24/303 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
++ F ++ A + + + +++ + L S FP ++ ++A G +
Sbjct: 7 KQAFRRFVLSLWHASQRWNDASCVDLSAAFAYFTLQSFFPLLLIALSVAARIFGRTDSLD 66
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+I V P + + ++A G + + +SN L+ +R +
Sbjct: 67 QLIIFVAQILPPSAVDLVDSTLRGLVA-QGFGAGLFGVVVLVFTASNAYLTLQRGADRLW 125
Query: 121 RVVEMRS------------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ + + TRL +F +L +V ++ L A++
Sbjct: 126 SAILPPASMDIPVSMQVYQFLRTRLEAFFIILAIAVLILTDQIAAGFRWLPEAFIGNLDY 185
Query: 169 ALGNLLLIIWNGRIYATMLALF------IGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
+ +L+L++ I + L + + + LP+ + IM ++PG I +
Sbjct: 186 YIPSLMLLVRESPIVSIGQILLPASALSLMALLLQRVLPSRRVPIMPLIPGSILIGLGLS 245
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG----AELNASMIIYYWR 278
+ + + +V+ Y + ++ ++++++GV G EL AS I + R
Sbjct: 246 LLNISLSLSLVSLGNRFQAYGVIGGVLVLTLWVWLVGVIVYFGQCWSVELAASRIKHLSR 305
Query: 279 KKP 281
P
Sbjct: 306 GNP 308
>gi|253581551|ref|ZP_04858776.1| ribonuclease BN [Fusobacterium varium ATCC 27725]
gi|251836621|gb|EES65156.1| ribonuclease BN [Fusobacterium varium ATCC 27725]
Length = 419
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 12/258 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I A+E++ + + + LLS+ P +L +LG + + +
Sbjct: 27 IQRALENYKRANSALWVTSLCFYTLLSLVPIFAILFSLGSWLGVAENIIIHLSKYSP-LN 85
Query: 72 EVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
E + + +L G+ I L+ + + S N ++V + R
Sbjct: 86 EEMITFLVQFSENLLENARSGVLAGIGFLSLGWTLITMFSIVEKSFNDIWQVEKSRMILR 145
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ LL + ++ ++ V I L + P ++F
Sbjct: 146 KITDYIAFFLLFPLLILTINGGMVIIGKKLEGIYDISPY----------TLQIIPSFSIF 195
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ +++ +P K K++ IFT + + F H V TY+ +Y + I
Sbjct: 196 LFFTALYMLIPNTKVKLIPAFFSAIFTSVLFSGLQYFFIHLQVMIITYNKIYGSFSVIFI 255
Query: 251 CLVFLYMLGVFFILGAEL 268
+L ++ F ILGA L
Sbjct: 256 FFFWLKIMWFFIILGAHL 273
>gi|227832359|ref|YP_002834066.1| hypothetical protein cauri_0531 [Corynebacterium aurimucosum ATCC
700975]
gi|262183781|ref|ZP_06043202.1| hypothetical protein CaurA7_07308 [Corynebacterium aurimucosum ATCC
700975]
gi|227453375|gb|ACP32128.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975]
Length = 360
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 104/267 (38%), Gaps = 18/267 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D I ++ + + G A+ I+ ++L++FP + A + A++ P ++ +
Sbjct: 39 DHIMKMLDRYGSQGGNQFAAGITYFSVLALFPIFMLTVAAAATVLANR--PDLMQQLEEQ 96
Query: 70 WPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAY---RVV 123
++ + + I ++L ++ I L + + LRI ++ +
Sbjct: 97 ITNAVSGDLGNSITELLHTAIEQRGAMYGIGGLTTLWSGLGWMNNLRIGISAMWMQDPTD 156
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA------YVRKFFPALGNLLLII 177
++ +L ++ V +VI V A L + FP +G +L+I
Sbjct: 157 APGNFVTKKLSDLLGLIGLLVAMVIAFGVTAAGSSGLTQKIFEWVGIESFPGMGTVLVI- 215
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
I ++A F+ ++ FLP K S L G + + L + I++ +
Sbjct: 216 --AGIVIGLIANFLVFWWMVAFLPRTKVPTKSGLMGAAIGAVLFEAIKQL-STVIMSSAA 272
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ A ++ +V +Y++ +
Sbjct: 273 GNPAGAVFGPVIVLMVVMYLVWRVVLY 299
>gi|297562886|ref|YP_003681860.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296847334|gb|ADH69354.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 374
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 97/269 (36%), Gaps = 7/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + A E + + +G +A ++ A LS FP + G+L A Q V D +
Sbjct: 33 LDHLVRAYERYADRNGNQLAGAVTYFAFLSFFPLLALAFAAVGYLAAVQV--EVGDYLQQ 90
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEMR 126
A V+ + +A G I L Y N V ALR +L+ + + E
Sbjct: 91 ALDGVLPGLSEQLPIDEIAQARVGAGVIGVLGLLYAGLNAVSALREALHSIWLKNLREGP 150
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYA 184
+ + +L +L L++ A ++ G+LL L + +
Sbjct: 151 NILLRKLADLLVMLGLGAALLLAVAFTSVAQTATQWLLGLVGLDGSLLANLSLRALALVI 210
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ A + + L + + G + + + V + + +YA
Sbjct: 211 AVGANIVIFVLAFALLSGSGRPTRMMWRGALLGAVGFEVLKAAAAVLLAGTLG-NPVYAS 269
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
A ++ LV++ ++ + A A+ +
Sbjct: 270 FAVLVGLLVWINLVMRLVMFSAAWTATWL 298
>gi|254776742|ref|ZP_05218258.1| hypothetical protein MaviaA2_19026 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 342
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 96/264 (36%), Gaps = 11/264 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + A + F + +G A+ ++ + ++FP ++ G + GF+ A + P ++ +
Sbjct: 20 LDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAVFGFVLARR--PQLLSSIDD 77
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYRVV-- 123
+ + +++ +++ ++ + A + + LR +L +
Sbjct: 78 HIRSQVNGALGNQLQELMNSAIDARTSVGVIGLATAVWAGLGWISHLRQALTEMWWDTQI 137
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E + +L ++ +V + A + + ++ W I+
Sbjct: 138 ESPGFVRNKLSDLLAMVGTFAVIVATVGLTTVGHAAPMAALLKWLGIPQFVVFDWLFWIF 197
Query: 184 ATMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++A + + LP K + + + I + V + + Y+ T S
Sbjct: 198 SILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAIGFEVFKQVASIYLRTVL-RSP 256
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF Y+ +
Sbjct: 257 AGAAFGPVLGLMVFAYITAYLVLF 280
>gi|323966040|gb|EGB61480.1| ribonuclease BN family protein [Escherichia coli M863]
gi|327251165|gb|EGE62858.1| ribonuclease BN-like family protein [Escherichia coli STEC_7v]
Length = 337
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 98/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|332084582|gb|EGI89776.1| ribonuclease BN-like family protein [Shigella boydii 5216-82]
Length = 337
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|330995828|ref|ZP_08319725.1| YihY family protein [Paraprevotella xylaniphila YIT 11841]
gi|329574558|gb|EGG56123.1| YihY family protein [Paraprevotella xylaniphila YIT 11841]
Length = 437
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/283 (16%), Positives = 105/283 (37%), Gaps = 11/283 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++Y + E ++ + + AS ++ S +L+ P + + LG +
Sbjct: 28 KKYAFNALRKLVLTSECYLSKHLNSHASALTYSTILATVPILAIIFAIGRGLGYGSIIEE 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + A + + I L + L Y + I+LN +
Sbjct: 88 KIKSNLSVN-QQFADMVLNFINSYLEHTQSGIFIGFGLLLLLYTVVQLTANIEIALNSIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V RS Y LL + ++I S + + LA + + +P L +
Sbjct: 147 NVKNQRSIYRQITDYISVFLLLPILIIISSGLSIF----LATIAQDYPNFMVLSTTVKIL 202
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMS-ILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + +++++P + + +LPG ++ + H + S+Y+
Sbjct: 203 IKLSPYALSGLLFTALYMYMPNTDIRFRNAVLPG-FIAGTAFQFLQYFYIHSQIWVSSYN 261
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL---NASMIIYYWRK 279
+Y A++ ++++ + + GA+L N ++ YY+ K
Sbjct: 262 AIYGSFAALPMFMLWVNFSWIICLFGAQLSYANQNLRSYYYIK 304
>gi|118472662|ref|YP_886035.1| ribonuclease [Mycobacterium smegmatis str. MC2 155]
gi|118173949|gb|ABK74845.1| ribonuclease, putative [Mycobacterium smegmatis str. MC2 155]
Length = 345
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 106/270 (39%), Gaps = 11/270 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ FD + A E + + G A+ I+ + ++FP ++ G + GF+ A Q P +
Sbjct: 18 KARWPWFDHVMRAQERYNDSKGDFYAAGITYFTIFALFPLLMVGFAVGGFVLASQ--PEL 75
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + + ++ + +++Q++ + I AA+ + LR +L++
Sbjct: 76 MGQLEDKIRQAVSGDLGAQLVQLMDSAIDSRTSVGVIGLATAAWAGLGWMANLREALSQM 135
Query: 120 YRV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI--PLALAYVRKF-FPALGNLL 174
+ + E + T+L +L A V +++ + + + P L
Sbjct: 136 WGLFREEKPGFVRTKLSDLLALLSAFVAIILTIGLTALGSSTAIENVLNRIGMPDSVGLS 195
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+++W + ++ ++ ++ LP S L + + + + L + Y+ +
Sbjct: 196 ILLWVLSVLMSLFVSWLLFTWMIARLPRETVTFRSSLRAGLLAAVGFEIFKQLASIYLKS 255
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
T A ++ +VF Y+ +
Sbjct: 256 VITGPAG-ATFGPVLGLMVFAYITARLVLF 284
>gi|124268665|ref|YP_001022669.1| ribonuclease BN family protein [Methylibium petroleiphilum PM1]
gi|124261440|gb|ABM96434.1| ribonuclease BN family protein [Methylibium petroleiphilum PM1]
Length = 306
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/286 (17%), Positives = 99/286 (34%), Gaps = 12/286 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
M E F ++ A ++++ + A+ ++ + S+ P ++ + G LG
Sbjct: 1 MPELLRDWFAVVRSAARYWLDSQAFVYAAALAFFTVFSIAPVVIVAVAVIGLVLGEQAAQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNR 118
++ + A + + T+ + V A L+ SLN
Sbjct: 61 GQLMAQLEAVIGAQAAGFVQSAVAGARFERNGLWPTLLGFGLILLGATTVFAQLQKSLNA 120
Query: 119 AYRVVEMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+ V S TR++S VL L++ + VA+ + + + P
Sbjct: 121 IWSVAPSPSRNTLLLLVKTRVLSLTVVLAIGFVLLVSLLLSVAVRAVMVFAEAWLPVPAW 180
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L ++ G + LF + LP + G T + +G L Y+
Sbjct: 181 TLGLLDIGLSLGVVTLLFAAM---FRILPDVVLAWRDVWMGAAVTAGLFTIGRSLIALYL 237
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+T S Y S++ LV++ + + GA + + R
Sbjct: 238 THTATGSA-YGAAGSLVLLLVWVNYSSLILLFGAAFTRAHLEARGR 282
>gi|320661625|gb|EFX29040.1| putative ribonuclease [Escherichia coli O55:H7 str. USDA 5905]
Length = 337
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISTLH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|331655148|ref|ZP_08356147.1| putative ribonuclease [Escherichia coli M718]
gi|331047163|gb|EGI19241.1| putative ribonuclease [Escherichia coli M718]
Length = 337
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
+++ L F ++ + L++ + A + ++ L
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIG 233
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++LA ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 234 LAISILANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SPS 292
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 293 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|189426008|ref|YP_001953185.1| ribonuclease BN [Geobacter lovleyi SZ]
gi|189422267|gb|ACD96665.1| ribonuclease BN [Geobacter lovleyi SZ]
Length = 286
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 94/259 (36%), Gaps = 5/259 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ + F G AS +S L++ P + + +G + + I
Sbjct: 11 RTIHAVWQRFGRHQGMLRASALSFDTTLALVPVLALIFVILQTVGVQELLEPFILQQLTG 70
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
VIA + + + GL + S L + +E++R + N + E RS
Sbjct: 71 NSSVIAAKVHEYVR---NTRVAGLGSFSTLLLVFTLLFLLESIREAFNAIWGAAEQRSLL 127
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L + + L + + ++ ++ + L
Sbjct: 128 RRGLDYLLVLAAVPLLLTTAIGMTSLLQS--QWLVQWLINNTRFGDGVLLLFRLTPFLCS 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L+ V+L LP K ++ S L G + W + ++ + + Y+ +Y L+ +
Sbjct: 186 SLVLVLVYLLLPGVKVRLASALTGGVAAGACWQLAHWVYFRFQFGVTRYNAIYGALSLLP 245
Query: 250 TCLVFLYMLGVFFILGAEL 268
L+++Y + +LG EL
Sbjct: 246 FLLIWIYTSWLVVLLGFEL 264
>gi|332996917|gb|EGK16536.1| ribonuclease BN-like family protein [Shigella flexneri K-272]
gi|333013396|gb|EGK32768.1| ribonuclease BN-like family protein [Shigella flexneri K-227]
Length = 337
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFATGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|329937214|ref|ZP_08286813.1| hypothetical protein SGM_2305 [Streptomyces griseoaurantiacus M045]
gi|329303495|gb|EGG47381.1| hypothetical protein SGM_2305 [Streptomyces griseoaurantiacus M045]
Length = 342
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/270 (14%), Positives = 96/270 (35%), Gaps = 15/270 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F ++ +A+ ++ A LS+FP ++ + G L V+D G +P
Sbjct: 23 VVYKFFDDQATYLAALLAYYAFLSLFPIMLILVAVLGTLLSHNPGLQQDVLDSALGEFP- 81
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE--MRSWYI 130
V+ I + I + Y + + + +LN+ + V
Sbjct: 82 VLGDQIAENIHSFHGNGLA--LAAGVAGSLYGALGVAQGAQHALNKIWAVPRYARPDPLR 139
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+RL ++ + ++ L + + + V + A + + I ++
Sbjct: 140 SRLKGALFLSVLALGLCLTTLLSVTVSDANVFGTRLATG-------IRVSAAVGAIILNA 192
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASIM 249
L + L + + + + W ++Y+ + Y ++
Sbjct: 193 ALLQLSYRVLTHCRLPLRHMNGAALGGACVWQALQWAGSYYVQDVLRGATATYGMFGIVL 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++Y+ + F++ AE++A ++ W +
Sbjct: 253 GLLAWIYLGALVFLMTAEVSAVRVLRLWPR 282
>gi|300916751|ref|ZP_07133462.1| putative ribonuclease [Escherichia coli MS 115-1]
gi|300415973|gb|EFJ99283.1| putative ribonuclease [Escherichia coli MS 115-1]
Length = 337
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 93/266 (34%), Gaps = 13/266 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCA 317
>gi|293416967|ref|ZP_06659604.1| ribonuclease [Escherichia coli B185]
gi|291431543|gb|EFF04528.1| ribonuclease [Escherichia coli B185]
Length = 337
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|170681590|ref|YP_001745792.1| putative ribonuclease [Escherichia coli SMS-3-5]
gi|218702287|ref|YP_002409916.1| hypothetical protein ECIAI39_4025 [Escherichia coli IAI39]
gi|218707151|ref|YP_002414670.1| hypothetical protein ECUMN_4023 [Escherichia coli UMN026]
gi|293407139|ref|ZP_06651063.1| inner membrane protein yhjD [Escherichia coli FVEC1412]
gi|293412953|ref|ZP_06655621.1| ribonuclease [Escherichia coli B354]
gi|298382889|ref|ZP_06992484.1| ribonuclease [Escherichia coli FVEC1302]
gi|300897308|ref|ZP_07115742.1| putative ribonuclease [Escherichia coli MS 198-1]
gi|300936731|ref|ZP_07151629.1| putative ribonuclease [Escherichia coli MS 21-1]
gi|331665143|ref|ZP_08366044.1| putative ribonuclease [Escherichia coli TA143]
gi|170519308|gb|ACB17486.1| putative ribonuclease [Escherichia coli SMS-3-5]
gi|218372273|emb|CAR20136.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
gi|218434248|emb|CAR15166.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|284923547|emb|CBG36642.1| putative membrane protein [Escherichia coli 042]
gi|291425950|gb|EFE98984.1| inner membrane protein yhjD [Escherichia coli FVEC1412]
gi|291468600|gb|EFF11093.1| ribonuclease [Escherichia coli B354]
gi|298276725|gb|EFI18243.1| ribonuclease [Escherichia coli FVEC1302]
gi|300358914|gb|EFJ74784.1| putative ribonuclease [Escherichia coli MS 198-1]
gi|300458146|gb|EFK21639.1| putative ribonuclease [Escherichia coli MS 21-1]
gi|331057653|gb|EGI29639.1| putative ribonuclease [Escherichia coli TA143]
Length = 337
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|301025852|ref|ZP_07189342.1| putative ribonuclease [Escherichia coli MS 69-1]
gi|300395818|gb|EFJ79356.1| putative ribonuclease [Escherichia coli MS 69-1]
Length = 337
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|194430987|ref|ZP_03063280.1| putative ribonuclease [Shigella dysenteriae 1012]
gi|194420442|gb|EDX36518.1| putative ribonuclease [Shigella dysenteriae 1012]
gi|332084016|gb|EGI89223.1| ribonuclease BN-like family protein [Shigella dysenteriae 155-74]
Length = 337
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMSNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|15804066|ref|NP_290102.1| hypothetical protein Z4935 [Escherichia coli O157:H7 EDL933]
gi|15833656|ref|NP_312429.1| hypothetical protein ECs4402 [Escherichia coli O157:H7 str. Sakai]
gi|24114790|ref|NP_709300.1| hypothetical protein SF3554 [Shigella flexneri 2a str. 301]
gi|26250155|ref|NP_756195.1| hypothetical protein c4333 [Escherichia coli CFT073]
gi|30065196|ref|NP_839367.1| hypothetical protein S4213 [Shigella flexneri 2a str. 2457T]
gi|74314224|ref|YP_312643.1| hypothetical protein SSON_3869 [Shigella sonnei Ss046]
gi|82545886|ref|YP_409833.1| hypothetical protein SBO_3521 [Shigella boydii Sb227]
gi|91213028|ref|YP_543014.1| hypothetical protein UTI89_C4054 [Escherichia coli UTI89]
gi|110643769|ref|YP_671499.1| putative tRNA-processing ribonuclease (putative membrane protein
YhjD) [Escherichia coli 536]
gi|110807382|ref|YP_690902.1| hypothetical protein SFV_3566 [Shigella flexneri 5 str. 8401]
gi|117625805|ref|YP_859128.1| hypothetical protein APECO1_2926 [Escherichia coli APEC O1]
gi|157157396|ref|YP_001464992.1| putative ribonuclease [Escherichia coli E24377A]
gi|168746940|ref|ZP_02771962.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4113]
gi|168753334|ref|ZP_02778341.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4401]
gi|168759605|ref|ZP_02784612.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4501]
gi|168765929|ref|ZP_02790936.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4486]
gi|168772524|ref|ZP_02797531.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4196]
gi|168779665|ref|ZP_02804672.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4076]
gi|168785387|ref|ZP_02810394.1| putative ribonuclease [Escherichia coli O157:H7 str. EC869]
gi|168797352|ref|ZP_02822359.1| putative ribonuclease [Escherichia coli O157:H7 str. EC508]
gi|187733691|ref|YP_001882211.1| putative ribonuclease [Shigella boydii CDC 3083-94]
gi|188494890|ref|ZP_03002160.1| putative ribonuclease [Escherichia coli 53638]
gi|191165249|ref|ZP_03027092.1| putative ribonuclease [Escherichia coli B7A]
gi|191170403|ref|ZP_03031956.1| putative ribonuclease [Escherichia coli F11]
gi|193061805|ref|ZP_03042902.1| putative ribonuclease [Escherichia coli E22]
gi|193068542|ref|ZP_03049504.1| putative ribonuclease [Escherichia coli E110019]
gi|194428720|ref|ZP_03061257.1| putative ribonuclease [Escherichia coli B171]
gi|195935050|ref|ZP_03080432.1| hypothetical protein EscherichcoliO157_01100 [Escherichia coli
O157:H7 str. EC4024]
gi|208809409|ref|ZP_03251746.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4206]
gi|208811830|ref|ZP_03253159.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4045]
gi|208819809|ref|ZP_03260129.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4042]
gi|209396850|ref|YP_002273001.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4115]
gi|209920982|ref|YP_002295066.1| hypothetical protein ECSE_3791 [Escherichia coli SE11]
gi|215488799|ref|YP_002331230.1| conserved inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217325278|ref|ZP_03441362.1| putative ribonuclease [Escherichia coli O157:H7 str. TW14588]
gi|218556072|ref|YP_002388985.1| hypothetical protein ECIAI1_3672 [Escherichia coli IAI1]
gi|218560597|ref|YP_002393510.1| hypothetical protein ECS88_3935 [Escherichia coli S88]
gi|218691806|ref|YP_002400018.1| hypothetical protein ECED1_4200 [Escherichia coli ED1a]
gi|218697231|ref|YP_002404898.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|237703291|ref|ZP_04533772.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|254795475|ref|YP_003080312.1| inner membrane protein [Escherichia coli O157:H7 str. TW14359]
gi|260846311|ref|YP_003224089.1| hypothetical protein ECO103_4250 [Escherichia coli O103:H2 str.
12009]
gi|260857626|ref|YP_003231517.1| hypothetical protein ECO26_4612 [Escherichia coli O26:H11 str.
11368]
gi|260870248|ref|YP_003236650.1| hypothetical protein ECO111_4336 [Escherichia coli O111:H- str.
11128]
gi|261224837|ref|ZP_05939118.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254266|ref|ZP_05946799.1| hypothetical protein EscherichiacoliO157EcO_00380 [Escherichia coli
O157:H7 str. FRIK966]
gi|291284894|ref|YP_003501712.1| putative ribonuclease [Escherichia coli O55:H7 str. CB9615]
gi|300815263|ref|ZP_07095488.1| putative ribonuclease [Escherichia coli MS 107-1]
gi|300822083|ref|ZP_07102226.1| putative ribonuclease [Escherichia coli MS 119-7]
gi|300907583|ref|ZP_07125219.1| putative ribonuclease [Escherichia coli MS 84-1]
gi|300922346|ref|ZP_07138468.1| putative ribonuclease [Escherichia coli MS 182-1]
gi|300971329|ref|ZP_07171410.1| putative ribonuclease [Escherichia coli MS 45-1]
gi|300976741|ref|ZP_07173560.1| putative ribonuclease [Escherichia coli MS 200-1]
gi|301046589|ref|ZP_07193730.1| putative ribonuclease [Escherichia coli MS 185-1]
gi|301306828|ref|ZP_07212878.1| putative ribonuclease [Escherichia coli MS 124-1]
gi|301326667|ref|ZP_07219994.1| putative ribonuclease [Escherichia coli MS 78-1]
gi|306816126|ref|ZP_07450264.1| putative ribonuclease [Escherichia coli NC101]
gi|307314350|ref|ZP_07593957.1| ribonuclease [Escherichia coli W]
gi|309796159|ref|ZP_07690570.1| putative ribonuclease [Escherichia coli MS 145-7]
gi|312968155|ref|ZP_07782365.1| ribonuclease BN-like family protein [Escherichia coli 2362-75]
gi|331659829|ref|ZP_08360767.1| putative ribonuclease [Escherichia coli TA206]
gi|331670353|ref|ZP_08371192.1| putative ribonuclease [Escherichia coli TA271]
gi|331675012|ref|ZP_08375769.1| putative ribonuclease [Escherichia coli TA280]
gi|331679599|ref|ZP_08380269.1| putative ribonuclease [Escherichia coli H591]
gi|331685177|ref|ZP_08385763.1| putative ribonuclease [Escherichia coli H299]
gi|12518234|gb|AAG58663.1|AE005577_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|26110584|gb|AAN82769.1|AE016768_187 Hypothetical protein yhjD [Escherichia coli CFT073]
gi|13363876|dbj|BAB37825.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|24054014|gb|AAN45007.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30043458|gb|AAP19178.1| hypothetical protein S4213 [Shigella flexneri 2a str. 2457T]
gi|73857701|gb|AAZ90408.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81247297|gb|ABB68005.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|91074602|gb|ABE09483.1| hypothetical protein UTI89_C4054 [Escherichia coli UTI89]
gi|110345361|gb|ABG71598.1| putative tRNA-processing ribonuclease (putative membrane protein
YhjD) [Escherichia coli 536]
gi|110616930|gb|ABF05597.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|115514929|gb|ABJ03004.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157079426|gb|ABV19134.1| putative ribonuclease [Escherichia coli E24377A]
gi|187430683|gb|ACD09957.1| putative ribonuclease [Shigella boydii CDC 3083-94]
gi|187771376|gb|EDU35220.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4196]
gi|188018358|gb|EDU56480.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4113]
gi|188490089|gb|EDU65192.1| putative ribonuclease [Escherichia coli 53638]
gi|189002545|gb|EDU71531.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4076]
gi|189359292|gb|EDU77711.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4401]
gi|189364695|gb|EDU83114.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4486]
gi|189369931|gb|EDU88347.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4501]
gi|189374395|gb|EDU92811.1| putative ribonuclease [Escherichia coli O157:H7 str. EC869]
gi|189380039|gb|EDU98455.1| putative ribonuclease [Escherichia coli O157:H7 str. EC508]
gi|190904651|gb|EDV64357.1| putative ribonuclease [Escherichia coli B7A]
gi|190909211|gb|EDV68797.1| putative ribonuclease [Escherichia coli F11]
gi|192932595|gb|EDV85192.1| putative ribonuclease [Escherichia coli E22]
gi|192958193|gb|EDV88634.1| putative ribonuclease [Escherichia coli E110019]
gi|194413303|gb|EDX29588.1| putative ribonuclease [Escherichia coli B171]
gi|208729210|gb|EDZ78811.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4206]
gi|208733107|gb|EDZ81794.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4045]
gi|208739932|gb|EDZ87614.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4042]
gi|209158250|gb|ACI35683.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4115]
gi|209755498|gb|ACI76061.1| hypothetical protein ECs4402 [Escherichia coli]
gi|209755500|gb|ACI76062.1| hypothetical protein ECs4402 [Escherichia coli]
gi|209755502|gb|ACI76063.1| hypothetical protein ECs4402 [Escherichia coli]
gi|209755504|gb|ACI76064.1| hypothetical protein ECs4402 [Escherichia coli]
gi|209755506|gb|ACI76065.1| hypothetical protein ECs4402 [Escherichia coli]
gi|209914241|dbj|BAG79315.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215266871|emb|CAS11312.1| conserved inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217321499|gb|EEC29923.1| putative ribonuclease [Escherichia coli O157:H7 str. TW14588]
gi|218353963|emb|CAV00422.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|218362840|emb|CAR00470.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|218367366|emb|CAR05145.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
gi|218429370|emb|CAR10332.2| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|222035232|emb|CAP77977.1| Inner membrane protein yhjD [Escherichia coli LF82]
gi|226902555|gb|EEH88814.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|254594875|gb|ACT74236.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|257756275|dbj|BAI27777.1| conserved predicted inner membrane protein [Escherichia coli
O26:H11 str. 11368]
gi|257761458|dbj|BAI32955.1| conserved predicted inner membrane protein [Escherichia coli
O103:H2 str. 12009]
gi|257766604|dbj|BAI38099.1| conserved predicted inner membrane protein [Escherichia coli
O111:H- str. 11128]
gi|281602879|gb|ADA75863.1| putative membrane protein [Shigella flexneri 2002017]
gi|290764767|gb|ADD58728.1| Putative ribonuclease [Escherichia coli O55:H7 str. CB9615]
gi|294493563|gb|ADE92319.1| putative ribonuclease [Escherichia coli IHE3034]
gi|300301453|gb|EFJ57838.1| putative ribonuclease [Escherichia coli MS 185-1]
gi|300308478|gb|EFJ62998.1| putative ribonuclease [Escherichia coli MS 200-1]
gi|300400700|gb|EFJ84238.1| putative ribonuclease [Escherichia coli MS 84-1]
gi|300411314|gb|EFJ94852.1| putative ribonuclease [Escherichia coli MS 45-1]
gi|300421286|gb|EFK04597.1| putative ribonuclease [Escherichia coli MS 182-1]
gi|300525446|gb|EFK46515.1| putative ribonuclease [Escherichia coli MS 119-7]
gi|300532155|gb|EFK53217.1| putative ribonuclease [Escherichia coli MS 107-1]
gi|300837947|gb|EFK65707.1| putative ribonuclease [Escherichia coli MS 124-1]
gi|300846671|gb|EFK74431.1| putative ribonuclease [Escherichia coli MS 78-1]
gi|305850522|gb|EFM50979.1| putative ribonuclease [Escherichia coli NC101]
gi|306906065|gb|EFN36585.1| ribonuclease [Escherichia coli W]
gi|307628601|gb|ADN72905.1| putative ribonuclease [Escherichia coli UM146]
gi|308120220|gb|EFO57482.1| putative ribonuclease [Escherichia coli MS 145-7]
gi|312286980|gb|EFR14890.1| ribonuclease BN-like family protein [Escherichia coli 2362-75]
gi|312948081|gb|ADR28908.1| hypothetical protein NRG857_17500 [Escherichia coli O83:H1 str. NRG
857C]
gi|313647628|gb|EFS12078.1| ribonuclease BN-like family protein [Shigella flexneri 2a str.
2457T]
gi|315062801|gb|ADT77128.1| putative lipid IVa transporter [Escherichia coli W]
gi|315252579|gb|EFU32547.1| putative ribonuclease [Escherichia coli MS 85-1]
gi|315286208|gb|EFU45644.1| putative ribonuclease [Escherichia coli MS 110-3]
gi|315295420|gb|EFU54750.1| putative ribonuclease [Escherichia coli MS 153-1]
gi|315295794|gb|EFU55111.1| putative ribonuclease [Escherichia coli MS 16-3]
gi|320173085|gb|EFW48304.1| Inner membrane protein YhjD [Shigella dysenteriae CDC 74-1112]
gi|320182582|gb|EFW57472.1| Inner membrane protein YhjD [Shigella boydii ATCC 9905]
gi|320191431|gb|EFW66081.1| Inner membrane protein YhjD [Escherichia coli O157:H7 str. EC1212]
gi|320193966|gb|EFW68599.1| Inner membrane protein YhjD [Escherichia coli WV_060327]
gi|320639838|gb|EFX09432.1| putative ribonuclease [Escherichia coli O157:H7 str. G5101]
gi|320645338|gb|EFX14354.1| putative ribonuclease [Escherichia coli O157:H- str. 493-89]
gi|320650649|gb|EFX19115.1| putative ribonuclease [Escherichia coli O157:H- str. H 2687]
gi|320655843|gb|EFX23766.1| putative ribonuclease [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320666648|gb|EFX33631.1| putative ribonuclease [Escherichia coli O157:H7 str. LSU-61]
gi|323154028|gb|EFZ40234.1| ribonuclease BN-like family protein [Escherichia coli EPECa14]
gi|323160584|gb|EFZ46525.1| ribonuclease BN-like family protein [Escherichia coli E128010]
gi|323166998|gb|EFZ52737.1| ribonuclease BN-like family protein [Shigella sonnei 53G]
gi|323174170|gb|EFZ59798.1| ribonuclease BN-like family protein [Escherichia coli LT-68]
gi|323179529|gb|EFZ65096.1| ribonuclease BN-like family protein [Escherichia coli 1180]
gi|323182992|gb|EFZ68393.1| ribonuclease BN-like family protein [Escherichia coli 1357]
gi|323189332|gb|EFZ74615.1| ribonuclease BN-like family protein [Escherichia coli RN587/1]
gi|323376611|gb|ADX48879.1| ribonuclease [Escherichia coli KO11]
gi|323944481|gb|EGB40554.1| ribonuclease BN family protein [Escherichia coli H120]
gi|323949763|gb|EGB45647.1| ribonuclease BN family protein [Escherichia coli H252]
gi|323954936|gb|EGB50716.1| ribonuclease BN family protein [Escherichia coli H263]
gi|324007325|gb|EGB76544.1| putative ribonuclease [Escherichia coli MS 57-2]
gi|324014186|gb|EGB83405.1| putative ribonuclease [Escherichia coli MS 60-1]
gi|324021176|gb|EGB90395.1| putative ribonuclease [Escherichia coli MS 117-3]
gi|324116607|gb|EGC10524.1| ribonuclease BN family protein [Escherichia coli E1167]
gi|326337480|gb|EGD61315.1| Inner membrane protein YhjD [Escherichia coli O157:H7 str. 1044]
gi|326340006|gb|EGD63813.1| Inner membrane protein YhjD [Escherichia coli O157:H7 str. 1125]
gi|331053044|gb|EGI25077.1| putative ribonuclease [Escherichia coli TA206]
gi|331062415|gb|EGI34335.1| putative ribonuclease [Escherichia coli TA271]
gi|331067921|gb|EGI39319.1| putative ribonuclease [Escherichia coli TA280]
gi|331072771|gb|EGI44096.1| putative ribonuclease [Escherichia coli H591]
gi|331077548|gb|EGI48760.1| putative ribonuclease [Escherichia coli H299]
gi|332095844|gb|EGJ00852.1| ribonuclease BN-like family protein [Shigella boydii 3594-74]
gi|332750050|gb|EGJ80462.1| ribonuclease BN-like family protein [Shigella flexneri K-671]
gi|332750206|gb|EGJ80617.1| ribonuclease BN-like family protein [Shigella flexneri 4343-70]
gi|332751293|gb|EGJ81696.1| ribonuclease BN-like family protein [Shigella flexneri 2747-71]
gi|332763475|gb|EGJ93714.1| putative membrane conserved inner membrane protein [Shigella
flexneri 2930-71]
gi|332996215|gb|EGK15842.1| ribonuclease BN-like family protein [Shigella flexneri VA-6]
gi|332997049|gb|EGK16665.1| ribonuclease BN-like family protein [Shigella flexneri K-218]
gi|333012454|gb|EGK31835.1| ribonuclease BN-like family protein [Shigella flexneri K-304]
Length = 337
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|320199701|gb|EFW74291.1| Inner membrane protein YhjD [Escherichia coli EC4100B]
Length = 337
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|307330671|ref|ZP_07609809.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
gi|306883650|gb|EFN14698.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
Length = 347
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/262 (14%), Positives = 96/262 (36%), Gaps = 8/262 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + E +A+ I+ ++ ++ FP I GA + + + +
Sbjct: 19 WLTRTHAWRTYERLDRVHWTRLAAAITFTSFIAFFPLIAVGAAIGAATLSQAQMAQLQKK 78
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + + ++Q A + ++A+ + + V +LR L + + E
Sbjct: 79 IAQQIPGISGQLDLGALVQ----NAATIGVVAAVLLLFTGISWVGSLRECLRAVWELEED 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ R + +VL+ + ++SF A+ + + W RI A
Sbjct: 135 PGNPLVRKVKDAFVLIGLGGVALVSFAVSALAATAVGRIARLIGIPENGIGGWLLRIAAF 194
Query: 186 MLALFIGLIFVHL---FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+A+ L+ + +LP + +++ + I + + VL + Y+ + S MY
Sbjct: 195 AIAVCADLVLLSYVLTWLPGVQPPRRTVVVAALIGAIGFELLKVLLSSYLKDVAAKS-MY 253
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
+ L+++ +
Sbjct: 254 GAFGVPIALLLWMNFTAKLTLY 275
>gi|312199944|ref|YP_004020005.1| ribonuclease BN [Frankia sp. EuI1c]
gi|311231280|gb|ADP84135.1| ribonuclease BN [Frankia sp. EuI1c]
Length = 444
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 92/263 (34%), Gaps = 21/263 (7%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGAWP 71
A + G +A+ + LS FP + AGF+ ++ + G P
Sbjct: 34 RAYARYGANGGDRLAASTTYYVFLSFFPLVALLFAAAGFVVDSYPDLKDDMVRQINGYLP 93
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-----VEALRISLNRAYRVVEMR 126
+ L + + G + V ALR ++ +
Sbjct: 94 G---------LADKLNISSLGTLKVGIGVLGLVGLLLAGLAFVSALRDAIRLMWHQNTDA 144
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
ITR + VL LV++S ++ + V + L W+ R +
Sbjct: 145 GNLITRRLRDIRVLAGLGLLVVISLALTSLATSANGVLLRATGMAGSSLASWSARGLGVL 204
Query: 187 LALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
LAL + +++ LP ++ ++ + + V L ++V +T + MY
Sbjct: 205 LALIADLMVFLYLFWRLP-RQTSRRAVARAALLGAVGIEVF-KLVGTWLVGKTTDNPMYG 262
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
A ++ L+++ ++ + + A
Sbjct: 263 TFAVLVGLLIWINIVMRWTLFAA 285
>gi|170022367|ref|YP_001718872.1| ribonuclease [Yersinia pseudotuberculosis YPIII]
gi|169748901|gb|ACA66419.1| ribonuclease [Yersinia pseudotuberculosis YPIII]
Length = 366
Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ + +
Sbjct: 51 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAMVGFVLASNPDLLAELINKIVNS 110
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 111 ISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNPQ 170
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+Y F ++ V L+I + A A + + L +
Sbjct: 171 DKEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLIA 230
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + V + T + ++ S
Sbjct: 231 LSISIAANYLLFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SPS 289
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 290 GAAFGSVIGLMAFFYFFARLTLFCA 314
>gi|153947665|ref|YP_001403000.1| ribonuclease BN-like family protein [Yersinia pseudotuberculosis IP
31758]
gi|152959160|gb|ABS46621.1| ribonuclease BN-like family protein [Yersinia pseudotuberculosis IP
31758]
Length = 361
Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 92/265 (34%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 51 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFATVGFVLASNPDLLAELINKIVNS 110
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 111 ISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNPQ 170
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+Y F ++ V L++ + A A + + L +
Sbjct: 171 DKEKFYYRYARDFISLIGLVVALIVTLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLIA 230
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + V + T + ++ S
Sbjct: 231 LSISIAANYLLFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SPS 289
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 290 GAAFGSVIGLMAFFYFFARLTLFCA 314
>gi|82779556|ref|YP_405905.1| hypothetical protein SDY_4542 [Shigella dysenteriae Sd197]
gi|309787516|ref|ZP_07682128.1| ribonuclease BN-like family protein [Shigella dysenteriae 1617]
gi|81243704|gb|ABB64414.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308925094|gb|EFP70589.1| ribonuclease BN-like family protein [Shigella dysenteriae 1617]
Length = 337
Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQIIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|78778484|ref|YP_396596.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9312]
gi|78711983|gb|ABB49160.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9312]
Length = 306
Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/286 (15%), Positives = 100/286 (34%), Gaps = 23/286 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--F 58
M+ V + A E + + D +++ + L S FP ++ ++A + Q
Sbjct: 1 MQRSLAWVLKSFWGACERWSKSDCIDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I V P + + + + ++ G + A+ + + N +L+
Sbjct: 61 DQQIISVAAQVLPPSVVELVETTLFNLID-QGFGAGILGAMFLLFTAGNAYLSLQRGSDR 119
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV-- 163
+N A+R R + R+ +F V +V+ + +
Sbjct: 120 LWEDELPSKKVNAAWREQASR-FLRNRIEAFLIVFFIGFLMVLDQISANLRMIPSNVLEN 178
Query: 164 ----RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
L L ++ G+ ++ + + + LP+ K + +LPG I I
Sbjct: 179 LSKSNNLISDLLLKLPLLQVGQFAIPLIGFSLMALLLQALLPSRKVPLKPLLPGSILIGI 238
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + I++ Y + + +++++LGV G
Sbjct: 239 GLTTLNLAVSKSILSLGARFQAYGFIGGFLVLTLWVWLLGVILYFG 284
>gi|284029292|ref|YP_003379223.1| ribonuclease BN [Kribbella flavida DSM 17836]
gi|283808585|gb|ADB30424.1| ribonuclease BN [Kribbella flavida DSM 17836]
Length = 376
Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/256 (15%), Positives = 95/256 (37%), Gaps = 7/256 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ A + + + G +A S LS+FP IV A + G L V + + P
Sbjct: 19 LWRAWKRYGDRRGNRLAGATSFFGFLSMFPLIVLTAAVTGKLLDPSAVDRLKKAIATNLP 78
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-SWYI 130
+ + D ++ A + +S ++ +++LR S+ + + + +
Sbjct: 79 GIGEQIDLDTLIS----NAGAIGLVSGVSLLLTGLGWIDSLRASIRSMHELDDQPGNVVK 134
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ G ++ + +I + + + ++ G L G I +
Sbjct: 135 LKVFDLGALIGLGLIGLIATGASSVLVGLSDKIVEWVGLDGTWLARWGIGLISILVGVAA 194
Query: 191 IGLIFVHL--FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L+F++L +P + + + + + L Y+ + Y LA
Sbjct: 195 GALLFLYLQTAMPRILLPRKVAMIAALVGGVLFYLAQRLGNSYVKNVIGNNAAYGTLALP 254
Query: 249 MTCLVFLYMLGVFFIL 264
+ LV++Y++ +L
Sbjct: 255 LALLVWIYLMTRAIML 270
>gi|238022761|ref|ZP_04603187.1| hypothetical protein GCWU000324_02672 [Kingella oralis ATCC 51147]
gi|237865964|gb|EEP67100.1| hypothetical protein GCWU000324_02672 [Kingella oralis ATCC 51147]
Length = 396
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 89/266 (33%), Gaps = 10/266 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVID 64
V F E + A ++ + LL++ P + + V +
Sbjct: 10 WRVAGFARFLWRRFNEVEVLQAAGSLTFTTLLALVPILTVLLVVVTVFPLFGGTVDAFML 69
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ + D + + + A L T+ V + + N+ +RV +
Sbjct: 70 FLNRTIVPSGVSAVVDYLNE-FKLQAGRLTTLGVGLMVVTVLMMVNTVEQTFNQIWRVQQ 128
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RSW++ RL + +++ +V +S L + G+L ++
Sbjct: 129 RRSWWV-RLPMYLVLVVLVPAVVGVSVSLSTNLLFFGAAQSPAWFSGSLKVVHQLLLGML 187
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F P+ + + G T V F Y+ F +Y +Y
Sbjct: 188 ALTLVF-------RVTPSCYVPMRHAVLGAGLTAALLEVAKWGFGVYLRHFHSYELVYGA 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
A + L++L++L + GA A
Sbjct: 241 FAIVPIFLIWLHLLWSIVLGGALFTA 266
>gi|323975076|gb|EGB70185.1| ribonuclease BN family protein [Escherichia coli TW10509]
Length = 337
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 98/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|296105252|ref|YP_003615398.1| putative ribonuclease [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295059711|gb|ADF64449.1| putative ribonuclease [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 341
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 97/265 (36%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + + +
Sbjct: 58 LIRAAERFNDRMGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIFNKILNN 117
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + L A Y N + LR ++ ++ V E +
Sbjct: 118 VSDPTLATTLKSTINTAVQQRTTVGIVGLLIALYSGVNWMGNLREAIRAQSREVWERKPQ 177
Query: 128 ----WYITRLISFGYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR- 181
++ F ++ V LV+ +S VA + + + L W G
Sbjct: 178 DQEKIWVKYFRDFVSLIGLLVALVVTLSITSVAGSAQQMIISALYLDYIDWLKPAWRGIG 237
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G + I + V ++ T+ + + S
Sbjct: 238 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTLLAAIGFEVIKIVMTYTLPSLVK-SPS 296
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 297 GAAFGSVLGLMAFFYFFARLTLFCA 321
>gi|289426582|ref|ZP_06428322.1| putative ribonuclease [Propionibacterium acnes J165]
gi|295130648|ref|YP_003581311.1| putative ribonuclease [Propionibacterium acnes SK137]
gi|289160226|gb|EFD08390.1| putative ribonuclease [Propionibacterium acnes J165]
gi|291375430|gb|ADD99284.1| putative ribonuclease [Propionibacterium acnes SK137]
gi|332675491|gb|AEE72307.1| putative tRNA-processing ribonuclease [Propionibacterium acnes 266]
Length = 418
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 17 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 76
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 77 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 137 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 196
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 197 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 255
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 256 KAVQAFGSIIIVMLVFDLVARLILF 280
>gi|33860655|ref|NP_892216.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633597|emb|CAE18554.1| similar to serum resistance locus BrkB [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 308
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 112/297 (37%), Gaps = 26/297 (8%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ ++ A E + + D +++ + L S FP ++ ++A + +I V
Sbjct: 13 IIKSLWGACERWSKSDCIDLSAAFAYYTLQSFFPILLISLSIASWFLGKQDGLDQQIISV 72
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS---------- 115
P + + + + ++ G + A+ + + N +L+
Sbjct: 73 AAQILPPSVVELVETTLFNLID-QGFGAGILGAMFLLFTAGNAYLSLQRGSDRLWEDQLP 131
Query: 116 ---LNRAYRVVEMRSWYITRLISFGYVLLASVTLV---IMSFVFVAIPLALAYVRKFFPA 169
+N A++ R + R+ +F V +V I + + + L +
Sbjct: 132 SRRINSAWQEQASR-FLRNRIEAFLVVFFIGFLMVLDQISANLRMIPTTVLEKISNSSNF 190
Query: 170 LGNLLL---IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+ ++ ++ G+ ++ + + + LP+ K + ++PG I I +
Sbjct: 191 ISEFIIKLPLLQVGQFALPLVGFSLMALLLQALLPSRKVPLKPLIPGSILIGIGLTTLNL 250
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG---AELNASMIIYYWRKK 280
+ I++ T Y + + +++++LGV G + + ASM + R+K
Sbjct: 251 AVSKSILSLGTRFQAYGFIGGFLVLTLWVWLLGVVLYFGQCWSVVIASMSLTSRRRK 307
>gi|16131394|ref|NP_417979.1| putative alternate lipid exporter, suppressor of msbA and KDO
essentiality, inner membrane protein [Escherichia coli
str. K-12 substr. MG1655]
gi|89110491|ref|AP_004271.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. W3110]
gi|157163001|ref|YP_001460319.1| putative ribonuclease [Escherichia coli HS]
gi|170018249|ref|YP_001723203.1| ribonuclease [Escherichia coli ATCC 8739]
gi|170083033|ref|YP_001732353.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|194435880|ref|ZP_03067983.1| putative ribonuclease [Escherichia coli 101-1]
gi|238902611|ref|YP_002928407.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|253771647|ref|YP_003034478.1| ribonuclease [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254038700|ref|ZP_04872756.1| inner membrane protein yhjD [Escherichia sp. 1_1_43]
gi|254163444|ref|YP_003046552.1| inner membrane protein [Escherichia coli B str. REL606]
gi|256025753|ref|ZP_05439618.1| conserved inner membrane protein [Escherichia sp. 4_1_40B]
gi|300927984|ref|ZP_07143541.1| putative ribonuclease [Escherichia coli MS 187-1]
gi|300950859|ref|ZP_07164741.1| putative ribonuclease [Escherichia coli MS 116-1]
gi|300955005|ref|ZP_07167415.1| putative ribonuclease [Escherichia coli MS 175-1]
gi|301028222|ref|ZP_07191491.1| putative ribonuclease [Escherichia coli MS 196-1]
gi|301646055|ref|ZP_07245960.1| putative ribonuclease [Escherichia coli MS 146-1]
gi|307140211|ref|ZP_07499567.1| conserved inner membrane protein [Escherichia coli H736]
gi|312972207|ref|ZP_07786381.1| ribonuclease BN-like family protein [Escherichia coli 1827-70]
gi|331644231|ref|ZP_08345360.1| putative ribonuclease [Escherichia coli H736]
gi|586684|sp|P37642|YHJD_ECOLI RecName: Full=Inner membrane protein yhjD
gi|466659|gb|AAB18498.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
gi|1789939|gb|AAC76547.1| putative alternate lipid exporter, suppressor of msbA and KDO
essentiality, inner membrane protein [Escherichia coli
str. K-12 substr. MG1655]
gi|85676522|dbj|BAE77772.1| conserved inner membrane protein [Escherichia coli str. K12 substr.
W3110]
gi|157068681|gb|ABV07936.1| putative ribonuclease [Escherichia coli HS]
gi|169753177|gb|ACA75876.1| ribonuclease [Escherichia coli ATCC 8739]
gi|169890868|gb|ACB04575.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|194425423|gb|EDX41407.1| putative ribonuclease [Escherichia coli 101-1]
gi|226839206|gb|EEH71229.1| inner membrane protein yhjD [Escherichia sp. 1_1_43]
gi|238860240|gb|ACR62238.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|242379041|emb|CAQ33840.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|253322691|gb|ACT27293.1| ribonuclease [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975345|gb|ACT41016.1| conserved inner membrane protein [Escherichia coli B str. REL606]
gi|253979501|gb|ACT45171.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|260447463|gb|ACX37885.1| ribonuclease [Escherichia coli DH1]
gi|299878708|gb|EFI86919.1| putative ribonuclease [Escherichia coli MS 196-1]
gi|300318047|gb|EFJ67831.1| putative ribonuclease [Escherichia coli MS 175-1]
gi|300449835|gb|EFK13455.1| putative ribonuclease [Escherichia coli MS 116-1]
gi|300463991|gb|EFK27484.1| putative ribonuclease [Escherichia coli MS 187-1]
gi|301075726|gb|EFK90532.1| putative ribonuclease [Escherichia coli MS 146-1]
gi|309703928|emb|CBJ03269.1| putative membrane protein [Escherichia coli ETEC H10407]
gi|310334584|gb|EFQ00789.1| ribonuclease BN-like family protein [Escherichia coli 1827-70]
gi|315138098|dbj|BAJ45257.1| conserved inner membrane protein [Escherichia coli DH1]
gi|315618447|gb|EFU99034.1| ribonuclease BN-like family protein [Escherichia coli 3431]
gi|323934696|gb|EGB31086.1| ribonuclease BN family protein [Escherichia coli E1520]
gi|323939498|gb|EGB35707.1| ribonuclease BN family protein [Escherichia coli E482]
gi|323959453|gb|EGB55110.1| ribonuclease BN family protein [Escherichia coli H489]
gi|323971380|gb|EGB66619.1| ribonuclease BN family protein [Escherichia coli TA007]
gi|331036525|gb|EGI08751.1| putative ribonuclease [Escherichia coli H736]
Length = 337
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|50842566|ref|YP_055793.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
KPA171202]
gi|50840168|gb|AAT82835.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
KPA171202]
Length = 418
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 17 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 76
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 77 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 137 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 196
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 197 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 255
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 256 KAVQAFGSIIIVMLVFDLVARLILF 280
>gi|50123279|ref|YP_052446.1| hypothetical protein ECA4359 [Pectobacterium atrosepticum SCRI1043]
gi|49613805|emb|CAG77256.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 338
Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 88/265 (33%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 48 LIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTGLINRIVNS 107
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + L A Y + + LR ++ R V R+
Sbjct: 108 ISDPNLANTLKSTVNTAVQQRTTVGLTGLLIALYSGISWMGNLREAIRAQSRDVWERNPK 167
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
Y F + + L+I F+ A + + L +
Sbjct: 168 DEEKIYFQYTRDFLSLTGLVIALIITLFLTSVAGTAQNMIVTALGLDGIEWLRPALTLIA 227
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++ G + + + T + ++ S
Sbjct: 228 LSISIFANYLLFLWIFFVLPRHKPKRKALFRGTLIAAVGFEAIKFAMTVALPKLAS-SPS 286
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 287 GAAFGSVIGLMAFFYFFARLTLFCA 311
>gi|302544632|ref|ZP_07296974.1| putative integral membrane protein [Streptomyces hygroscopicus ATCC
53653]
gi|302462250|gb|EFL25343.1| putative integral membrane protein [Streptomyces himastatinicus
ATCC 53653]
Length = 322
Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ I+ + L+ FP + GA +GA + + + +
Sbjct: 26 WRSYERLQRVHWSRLAAAITFISFLAFFPLVTVGAA----IGAATLTESQMHQLQRKLAQ 81
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I L L A + ++ + V +LR L + + E +TR
Sbjct: 82 QIPGISGQLDLSGLIQNAATIGIVAGALLLFTGIGWVGSLRECLRAVWELEEDPGNLVTR 141
Query: 133 LISFGYVLLASVTLVIMSFVF--VAIPLALAYVRKF-FPALGNLLLIIWNGRIYATMLAL 189
+ G VL+ + + SF +A+ + + P G ++W + A
Sbjct: 142 RLKDGLVLIGLGGVALASFAVSTLAVTVVHRMTQLLQIPENGVGGWLLWIAAFLIAVAAD 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L +V +LP + ++ + I + + +L + Y+ + S MY +
Sbjct: 202 FLLLCYVLTWLPRVEPPRRRVVVAALIGAIGFELLKLLLSSYLRGVAAKS-MYGAFGVPI 260
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A+
Sbjct: 261 ALLLWINFTAKLTLYCAAWTAT 282
>gi|91788955|ref|YP_549907.1| ribonuclease BN [Polaromonas sp. JS666]
gi|91698180|gb|ABE45009.1| ribonuclease BN, putative [Polaromonas sp. JS666]
Length = 302
Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/258 (16%), Positives = 97/258 (37%), Gaps = 4/258 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
++ F G +A ++ ALLS+ P ++ A + + + G
Sbjct: 24 RVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIALSHVIDQSALLEALGRYIGWLAPG 83
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR---VVEMRSWYI 130
++ I E+ LA + + +FSS L +++ + V+ R + +
Sbjct: 84 QSEFIVGELANFLAHREV-MGWLLLATMLFFSSLAFTVLENAMSVVFLHRVVIRRRHFLV 142
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ ++ + Y+L + L++++ V ++ +F +L +
Sbjct: 143 SAVLPYCYILCLGLGLLLVTLVSGSMQALGEKSVEFLGYSWSLSGFSGVLLYLLGLAGEI 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L V++ +P + + L G + + W V Y T S +Y L + +
Sbjct: 203 FLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHALVWYFGTLSQVGLVYGSLTTAIV 262
Query: 251 CLVFLYMLGVFFILGAEL 268
L+ L + +LGA++
Sbjct: 263 VLLSLEIAATLLLLGAQV 280
>gi|289425487|ref|ZP_06427264.1| putative ribonuclease [Propionibacterium acnes SK187]
gi|289154465|gb|EFD03153.1| putative ribonuclease [Propionibacterium acnes SK187]
Length = 418
Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 94/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 17 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 76
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 77 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 137 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 196
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V +
Sbjct: 197 AGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 255
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 256 KAVQAFGSIIIVMLVFDLVARLILF 280
>gi|152990089|ref|YP_001355811.1| ribonuclease BN [Nitratiruptor sp. SB155-2]
gi|151421950|dbj|BAF69454.1| ribonuclease BN [Nitratiruptor sp. SB155-2]
Length = 281
Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 94/255 (36%), Gaps = 12/255 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAW 70
+ + I+ F + D A+ +S + S+ P ++ + L + + + +F +
Sbjct: 4 LKELIKTFYDPDISLYAASLSFYTIFSIVPLLLVFFTIFTKLPSFSDYYGKLKHFIFTSL 63
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ ++ + L +K L I + + S + +N+ ++ RS++
Sbjct: 64 IPTQQETLSAYLDTFLQNSSK-LGIIGFVFVLFASIMFFQNYEYIVNKIFKSR-PRSFWD 121
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + + LA + L + ++ I L + L ++
Sbjct: 122 SITTYWTLMTLAPIGLALSFYLSTKIQHTLN---------SYQYTNWIDFLSIFPYLIIW 172
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + L + W +G LF +Y++ TY+T+Y ++I+
Sbjct: 173 AIFFITYKISSTTWIHPKAALYSSFIASLVWDIGKNLFVYYVIYSKTYATLYGSFSAILF 232
Query: 251 CLVFLYMLGVFFILG 265
+++Y+ F+ G
Sbjct: 233 FFLWIYISWQIFLYG 247
>gi|322830850|ref|YP_004210877.1| ribonuclease [Rahnella sp. Y9602]
gi|321166051|gb|ADW71750.1| ribonuclease [Rahnella sp. Y9602]
Length = 374
Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 92/263 (34%), Gaps = 11/263 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 51 LLRATERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINRIVNS 110
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + L A Y + + LR ++ R V R+
Sbjct: 111 ISDPNLANTLKSTVNTAIQQRTAVGLSGLLIALYSGVSWMGNLREAIRAQSRDVWERNPQ 170
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
Y + F + + L+I + A + + L ++ +
Sbjct: 171 DQEKIYRRYIRDFISLTGLVLALIITLSLTSIAGAAQKTIVDALGLGGIDWLRPVMTSIT 230
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K + ++L G + + + V + T + +T S
Sbjct: 231 LVISIAANYLLFLWIFWMLPRHKPRKKALLRGTLLAAMGFEVIKFVMTMTLPKLAT-SPS 289
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A S++ + F Y +
Sbjct: 290 GAAFGSVIGLMAFFYFFARLTLF 312
>gi|207722607|ref|YP_002253043.1| ribonuclease rnase bn (rbn) protein [Ralstonia solanacearum MolK2]
gi|206587789|emb|CAQ18371.1| ribonuclease rnase bn (rbn) protein [Ralstonia solanacearum MolK2]
Length = 323
Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 108/287 (37%), Gaps = 11/287 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSMLKGAWLVLTGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRA 119
+ + G A + + ++A+ + V + L+ SL+
Sbjct: 70 EIFGQIQGLVGTQGAAAVEAVLAATRRSGHGLFAAVTAMVLLVAGATTVFSELKDSLDEL 129
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V + +RL+SF +L+ + L++ V A+ + + +G +
Sbjct: 130 WDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAALAVVERFWGAV--WMGTVF 187
Query: 175 LIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ N + + + + + LP + + G + T + + +G L Y+
Sbjct: 188 AVVANALSMVFSFAVVALLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLYLG 247
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 248 N-SAVASSYGAAGSVVALMLWVYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|253686495|ref|YP_003015685.1| ribonuclease [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251753073|gb|ACT11149.1| ribonuclease [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 338
Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 89/265 (33%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 48 LIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTGLINRIVNS 107
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + L A Y + + LR ++ R V RS
Sbjct: 108 ISDPNLANTLKNTVNTAVQQRTTVGITGLLIALYSGISWMGNLREAIRAQSRDVWERSPK 167
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
Y F + + L+I F+ A + + L +
Sbjct: 168 DEEKIYFQYTRDFLSLTGLVIALIITLFLTSVAGTAQNMIVTALGLDGIEWLRPALTLIA 227
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++ G + + + V T + ++ S
Sbjct: 228 LSISIFANYLLFLWIFFVLPRHKPKRKALFRGTLIAAVGFEVIKFAMTVALPKLAS-SPS 286
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 287 GAAFGSVIGLMAFFYFFARLTLFCA 311
>gi|227328197|ref|ZP_03832221.1| hypothetical protein PcarcW_13025 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 338
Score = 76.4 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 89/265 (33%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 48 LIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTELINRIVNS 107
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + L A Y + + LR ++ R V R+
Sbjct: 108 ISDPNLANTLKSTVNTAVQQRTTVGITGLLIALYSGISWMGNLREAIRAQSRDVWERNPK 167
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
Y F + + L+I F+ A + + L +
Sbjct: 168 DEEKIYFQYTRDFLSLTGLVIALIITLFLTSVAGTAQNMIVTALGLDGIEWLRPALTLIA 227
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++ G + + + + T + ++ S
Sbjct: 228 LSISIFANYLLFLWIFFVLPRHKPKRKALFRGTLIAAVGFEIIKFAMTVALPKLAS-SPS 286
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 287 GAAFGSVIGLMAFFYFFARLTLFCA 311
>gi|255533166|ref|YP_003093538.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
gi|255346150|gb|ACU05476.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
Length = 306
Score = 76.4 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 94/268 (35%), Gaps = 10/268 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VID 64
+ F A F + D +A + ++ P ++ L GF + + + +
Sbjct: 10 KLFFIRFSAAFRLFQKNDPLRLAGATAFFTNFALPPILLILIRLFGFFMDRKTLAARLFE 69
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAY--R 121
+ + I + + + + T IS + + ++ ++ S+++ +
Sbjct: 70 RLANILDDDSTGQIRQTLRNIRGIDHQWYATLISFVFFLFVATTLFNVIKNSMDQIWSIG 129
Query: 122 VVEMRSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
E + R S +LLA + ++ AY+ P G L +
Sbjct: 130 KKEHVGFMFTMKLRARSMVIILLAGLLFLVGFLTDSIQAFIGAYINTAAPTFGKFFLSVL 189
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
N ++ + + + FL + + L G I T + + G + ++ S
Sbjct: 190 NQLLFIA--IVMVWFTVLFRFLTNGRPTWKAALRGGILTAVLFTFGKYILRI-LLPLSGI 246
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGA 266
+Y SI+ ++F++ F GA
Sbjct: 247 GNVYGTSGSIVLIMLFVFYSSFIFYFGA 274
>gi|308188570|ref|YP_003932701.1| hypothetical protein Pvag_3103 [Pantoea vagans C9-1]
gi|308059080|gb|ADO11252.1| Uncharacterized 36.0 kDa protein in kdgK 5'region [Pantoea vagans
C9-1]
Length = 339
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 92/263 (34%), Gaps = 11/263 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A++ F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 52 RALDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTDIINKIVSSIS 111
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS--- 127
+ + + L A Y N + LR ++ ++ V E +
Sbjct: 112 DPTLATTLKNTVNTAIQQRATVGITGLLLALYSGLNWMGNLREAIRAQSRDVWERKPDDK 171
Query: 128 --WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGRIY 183
+ + F + + LVI + A A + + L +
Sbjct: 172 EKIWKRYIRDFLSLTGLMLALVITLSLTSVAGSAQATIVSALGLDGIEWLRPALTIIATS 231
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++LA ++ +++ LP K + ++ G + I + V + T + +T S A
Sbjct: 232 ISVLANYLLFLWIFWILPRHKPRKKALFRGTLLAAIGFEVIKFVMTLTLPKLAT-SPSGA 290
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
S++ + F Y + A
Sbjct: 291 AFGSVLGLMAFFYFFARLTLFCA 313
>gi|332345485|gb|AEE58819.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 337
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 96/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISTFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|227113859|ref|ZP_03827515.1| hypothetical protein PcarbP_12884 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 338
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/265 (15%), Positives = 89/265 (33%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 48 LIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTGLINRIVNS 107
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + L A Y + + LR ++ R V R+
Sbjct: 108 ISDPNLANTLKSTVNTAVQQRTTVGITGLLIALYSGISWMGNLREAIRAQSRDVWERNPK 167
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
Y F + + L+I F+ A + + L +
Sbjct: 168 DEEKIYFQYTRDFLSLTGLVIALIITLFLTSVAGTAQNMIVTALGLDGIEWLRPALTLIA 227
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++ G + + + V T + ++ S
Sbjct: 228 LSISIFANYLLFLWIFFVLPRHKPKRKALFRGTLIAAVGFEVIKFAMTVALPKLAS-SPS 286
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 287 GAAFGSVIGLMAFFYFFARLTLFCA 311
>gi|55378011|ref|YP_135861.1| ribonuclease BN-like [Haloarcula marismortui ATCC 43049]
gi|55230736|gb|AAV46155.1| ribonuclease BN-like [Haloarcula marismortui ATCC 43049]
Length = 345
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 96/273 (35%), Gaps = 22/273 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR +++ + E MA I+ A LS+ P ++
Sbjct: 1 MRFSRARTEEVLRALVHEIRAERLTFMAGSIAYHAFLSILPLLLLVLTFVQRTENVTLRA 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ ++ + I + + A + + L + S L + + Y
Sbjct: 61 SIVGIMEAVLTTQASGIIQQGLTE--ADASVSALGVGFL--LWGSLRIFRGLDTAFSDIY 116
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ ++ +V ++ S + +P + +W
Sbjct: 117 ETGASNTFLDQLGDGLVLLVTVAVAILSASALGSVLPETGS-------------GPLWTV 163
Query: 181 RIYATMLA-LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
A LF+ ++ P + +PGV F I V VLFT F + S
Sbjct: 164 ASGLVRAAGLFVVFYPMYYIFPDTDVSPLEAVPGVAFAAIGLTVAQVLFTA----FKSGS 219
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
T +ASI+ L +LY++G+ +LGA +NA +
Sbjct: 220 TGGNIIASILVLLSWLYIIGLVILLGAAINAVL 252
>gi|320183470|gb|EFW58319.1| Inner membrane protein YhjD [Shigella flexneri CDC 796-83]
Length = 337
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 93/266 (34%), Gaps = 13/266 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCA 317
>gi|238750207|ref|ZP_04611709.1| Inner membrane protein yhjD [Yersinia rohdei ATCC 43380]
gi|238711440|gb|EEQ03656.1| Inner membrane protein yhjD [Yersinia rohdei ATCC 43380]
Length = 339
Score = 76.0 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 92/265 (34%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 42 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVNT 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 102 ISDPSLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNPQ 161
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+Y F ++ + L+I + A + + + L ++
Sbjct: 162 DQEKFYYRYARDFVSLIGLVIALIITLSLTSVAGAAQSAIVNALGLGGIEWLRPVMTLIA 221
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 222 LSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFIMTMMLPRLAS-SPS 280
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 281 GAAFGSVIGLMAFFYFFARLTLFCA 305
>gi|256380456|ref|YP_003104116.1| ribonuclease [Actinosynnema mirum DSM 43827]
gi|255924759|gb|ACU40270.1| ribonuclease [Actinosynnema mirum DSM 43827]
Length = 339
Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 102/269 (37%), Gaps = 9/269 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + A + E G A+ ++ ++LS+ P ++ G +AG + Q P ++D + G
Sbjct: 23 LDHVIRAGVRYTERYGTHYAAAVTYFSVLSLVPLLMIGFAVAGIVLTSQ--PALLDDLRG 80
Query: 69 AWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A E + + D + +V+ + L AAY + LR +L + +
Sbjct: 81 AITEAVPGSLGDTLNEVVGQAIDSKGTVGVFGLLGAAYSGIGWITNLRDALTAQWGYPKA 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + + L+ +++S A+ A++ L + R
Sbjct: 141 DLPLVKTAVRDLFALIGLGIALVVSVGITAVGSGFAHLVLRGIGLDGVWWAEALLRAGTI 200
Query: 186 MLAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L L ++ ++V LP S + G T + + + + Y+ T S
Sbjct: 201 VLGLAANWLVFLWVLAKLPRKPVSWRSAMRGAAVTSVGFELLKQGGSIYLGIIGT-SPTG 259
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
++ LVF +L F + A A+
Sbjct: 260 LAFGPLIGVLVFANLLAQFMLFMAAWTAT 288
>gi|77166177|ref|YP_344702.1| ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|254435572|ref|ZP_05049079.1| YihY family protein [Nitrosococcus oceani AFC27]
gi|76884491|gb|ABA59172.1| Ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|207088683|gb|EDZ65955.1| YihY family protein [Nitrosococcus oceani AFC27]
Length = 294
Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 105/269 (39%), Gaps = 10/269 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I F G +A I+ ALLSV P + L+ + Q + D +
Sbjct: 18 FLSRVISGFRANQGLLLAGAIAYYALLSVVPMFALILVGLSQIIDPEQLLEATHDYLALL 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMR 126
P A+ +T +I + L + + L +FSS L +++ + R
Sbjct: 78 APGQ-AEILTQQIAEFLENWKL-IGVVGFLVLLFFSSMAFTVLENAMSVIFFHRVAIHRR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ ++ ++ F Y+ L + L +++ V A+ + P LGN+ + IY
Sbjct: 136 HFLVSAILPFCYLFLLGLGLFVVTLVSSALHTLDD---RTVPLLGNIFGSYYAIGIYIVG 192
Query: 187 LALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + L+ ++L +P + G + + W + Y T S + +Y
Sbjct: 193 LLGEVLLLTSLYLVMPVGRIVFRHAFIGGMVATLLWELTRQALVWYFSTLSFVNIIYGSF 252
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A+++ L+ L + + GA++ A
Sbjct: 253 AAVVMILLSLEAAAIIVLFGAQVIAEYER 281
>gi|88856447|ref|ZP_01131105.1| narrowly hypothetical protein [marine actinobacterium PHSC20C1]
gi|88814314|gb|EAR24178.1| narrowly hypothetical protein [marine actinobacterium PHSC20C1]
Length = 355
Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 106/286 (37%), Gaps = 17/286 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ H+ E G +++ +S + +VF I G +AG + G + V + +
Sbjct: 19 VVRVFRHYAENLGPLLSAGLSYQGIFAVFAAIWVGFAVAGVIVQGNPVLLNAVYNFISAN 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVVE- 124
P +I + + + + I+ + A + + + + R ++ + +
Sbjct: 79 IPGLIGDGSGNGAITRETLADSSVLGITGVIAAFGLFFTALGWIASGRDAVRSMFGLEAA 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ + +L G + + ++I + + VA AL+++ + +I A
Sbjct: 139 ETNFLLLKLRDVGLAIGFGLAVLISAVLSVASTAALSWILDLVSINEDSAAARVATQIVA 198
Query: 185 TMLALFI---GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L + L + + K + G I + + + +T + +
Sbjct: 199 FVIVLILDTATLGVFYRVVSGIKIPFRMLAQGTIIAALLLGALKFSGSFLLEG-ATRNPL 257
Query: 242 YAGLASIMTCLVFLYMLGVFFILG------AELNASMIIYYWRKKP 281
A A I+ L++ ++ ++G +A + I ++ P
Sbjct: 258 LASFAVIIGLLIWFNLICQIILIGSAWIAVGADDAELDISGEKRHP 303
>gi|120608926|ref|YP_968604.1| ribonuclease BN [Acidovorax citrulli AAC00-1]
gi|120587390|gb|ABM30830.1| ribonuclease BN [Acidovorax citrulli AAC00-1]
Length = 334
Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 104/266 (39%), Gaps = 15/266 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAW 70
+ A+ +++ DG M++ +S +LS+ P ++ + G+ ++ T +I V
Sbjct: 29 LVRAVNLWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDKSYLETNLIAQVQSVM 88
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAY-----RVVE 124
E A+ + + L +I+ + GV L+ +L R + +
Sbjct: 89 GERGAEVVKLALSSAREPSEGRLASIAGFVLLLSGATGVFVELQSALERLWTSGHPPATD 148
Query: 125 MRSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-GNLLLIIWNG 180
++W+ RL YVL L+I V AI + + P G LL ++
Sbjct: 149 NKAWWRMASLRLRGLAYVLAIGFLLLISLVVSTAIHVVANWASARLPFASGPLLQLVNEL 208
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + LF+GL+ K + ++ G + I + VG L + + +
Sbjct: 209 VAFGIAVLLFVGLM---RIGTGPKPPMACLVFGAVVGAILFTVGKQLLAL-YLATAAVVS 264
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGA 266
Y S++ L+++Y + A
Sbjct: 265 AYGAAGSLVVLLMWIYFSSAVLLFSA 290
>gi|83747126|ref|ZP_00944170.1| Ribonuclease BN [Ralstonia solanacearum UW551]
gi|207738553|ref|YP_002256946.1| ribonuclease rnase bn (rbn) protein [Ralstonia solanacearum
IPO1609]
gi|83726256|gb|EAP73390.1| Ribonuclease BN [Ralstonia solanacearum UW551]
gi|206591921|emb|CAQ58827.1| ribonuclease rnase bn (rbn) protein [Ralstonia solanacearum
IPO1609]
Length = 323
Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 108/287 (37%), Gaps = 11/287 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSMLKGAWLVLAGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRA 119
+ + G A + + ++A+ + V + L+ SL+
Sbjct: 70 EIFGQIQGLVGTQGAAAVEAVLAATRRSGHGLFAAVTAMVLLVAGATTVFSELKDSLDEL 129
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V + +RL+SF +L+ + L++ V A+ + + +G +
Sbjct: 130 WDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAALAVVERFWGAM--WMGTVF 187
Query: 175 LIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ N + + + + + LP + + G + T + + +G L Y+
Sbjct: 188 AVVANALSMVFSFAVVALLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLYLG 247
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 248 N-SAVASSYGAAGSVVALMLWVYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|146313551|ref|YP_001178625.1| putative ribonuclease [Enterobacter sp. 638]
gi|145320427|gb|ABP62574.1| putative ribonuclease [Enterobacter sp. 638]
Length = 341
Score = 76.0 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 96/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + + +
Sbjct: 58 LIRATERFNDRMGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPTLLQDIFNKILVN 117
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + L A Y N + LR ++ R V R+
Sbjct: 118 VSDPTLAATLKNTISTAVQQRTTVGIVGLLIALYSGINWMGNLREAIRAQSRDVWERTPQ 177
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+I L F ++ + L++ + A + L + + R+
Sbjct: 178 DEEKIWIKYLRDFVSLIGLLIALIVTLSITSVAGSAQQMIISAL-YLDYIEWLKPAWRVI 236
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + S
Sbjct: 237 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIVMTYTLPMLVK-SP 295
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 296 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAQYKDDPRMP 336
>gi|145589162|ref|YP_001155759.1| putative ribonuclease BN [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047568|gb|ABP34195.1| tRNA-processing RNAse BN [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 282
Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 99/266 (37%), Gaps = 9/266 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--VV 66
+ + E ++ +A ++ + LS+ P + L +L + ++
Sbjct: 11 LSLAKEIWERNRGQNLNQIAGGLAFTTTLSLVPMVTIATILISYLPKVIQIKNAFKNWLL 70
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + + + Q + A+GL + ++ + + + + N+ ++V R
Sbjct: 71 ETYMPGGLNEQVFIYLDQ-FSAQARGLTLLGLISLFITAIMTLSVIESAFNQIFKVKLRR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ I +L + L + ++ + A A L+ I A +
Sbjct: 130 PLHKKVAIYATATILGPILLGLGVYLSGILFSAAEGWTDSVSAGFKLIATI------API 183
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ I V+ LP A+ + G F +S+ F ++ + Y T+Y A
Sbjct: 184 ILAIIVYTVVYKVLPYAQISLSDAFSGGFFAALSFEAMKFGFAIFLTHTAFYKTVYGAFA 243
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
+ L+++Y+ + GA L A++
Sbjct: 244 ILPLALLWIYLTWWITLAGAVLVANL 269
>gi|261819452|ref|YP_003257558.1| ribonuclease [Pectobacterium wasabiae WPP163]
gi|261603465|gb|ACX85951.1| ribonuclease [Pectobacterium wasabiae WPP163]
Length = 338
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 88/265 (33%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 48 LIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTGLINRIVNS 107
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + L A Y + + LR ++ R V R+
Sbjct: 108 ISDPNLANTLKSTVNTAVQQRTTVGLTGLLIALYSGISWMGNLREAIRAQSRDVWERNPK 167
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
Y F + + L+I F+ A + + L +
Sbjct: 168 DEEKIYFQYTRDFLSLTGLVIALIITLFLTSVAGTAQNMIVTALGLDGIEWLRPALTLIA 227
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++ G + + + T + ++ S
Sbjct: 228 LSISIFANYLLFLWIFFVLPRHKPKRKALFRGTLIAAVGFEAIKFAMTVALPKLAS-SPS 286
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 287 GAAFGSVIGLMAFFYFFARLTLFCA 311
>gi|291288185|ref|YP_003505001.1| cyclic nucleotide-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290885345|gb|ADD69045.1| cyclic nucleotide-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 425
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 100/271 (36%), Gaps = 13/271 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI-----VFGANLAGFLGAHQ 57
+YF F I A F + A+ + LLS+ P + +F L +
Sbjct: 15 KYFLDFFQKISLAYNFFNRNELRNHAAACAYYMLLSLIPLVLLLLYIFDTFLNRYPAFSD 74
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISL 116
+ TV+ + + + ++ A I + FSS + +++ +
Sbjct: 75 DIFTVLSMFNEKITPEMFEKFG------ISKAAGSAIGIFGIFNLLFSSRLILGSIQRAF 128
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ + + R++ + IS G + A + ++++ + Y+ L + +
Sbjct: 129 SIIFPAEKKRNFLLENAISLGILPAAFILVLLIGVFNSTKDIIYKYLELNNINLEIIQPL 188
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ F+ + F++ +LP K + L G + + G+ +
Sbjct: 189 FNAAALILPASTGFVIVYFIYRYLPVRKPGTGNALKGALLFMV-IFAGSRSVAVVVFKHI 247
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+T Y L S++ L++ Y + + F+ A+
Sbjct: 248 AGNTAYGLLGSLIIVLIWSYFVFLLFLFCAQ 278
>gi|326795827|ref|YP_004313647.1| ribonuclease BN [Marinomonas mediterranea MMB-1]
gi|326546591|gb|ADZ91811.1| ribonuclease BN [Marinomonas mediterranea MMB-1]
Length = 274
Score = 75.6 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 95/272 (34%), Gaps = 9/272 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDV 65
+ +I+ ++++ F A+ ++L++LL+ P I + T+I
Sbjct: 9 HLINIMKESVKRFNNSATSQKAAQLTLASLLAAVPIITIIFGILSLTPALSSLESTLIGF 68
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + +L + AK L + + + S+ + + +
Sbjct: 69 IESNLAPGSSNEVITYLLS-FSDQAKNLSLAGFATLLLTALLLLNSFENSVQSIWGIHDK 127
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS +L+++ +L L+ S ++ + L I
Sbjct: 128 RS-IKDKLLTYWAILTLGPILLAASLSLYGTLISYQLAGIELSQFIDKLFDIGK------ 180
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L+ ++ P S I L S ++ LF ++ F+ Y +Y
Sbjct: 181 FLIYTFMLLLLNYLAPNTNSSIKLSLICSAIGAFSLILLNTLFANFAQFFANYQVIYGAF 240
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ LV+L V + LNA++ Y
Sbjct: 241 AALPIFLVWLQASWVIVLATICLNATLHEYRQ 272
>gi|17549883|ref|NP_523223.1| putative ribonuclease RNase BN (RBN) transmembrane protein
[Ralstonia solanacearum GMI1000]
gi|17432139|emb|CAD18815.1| putative ribonuclease rnase bn (rbn) transmembrane protein
[Ralstonia solanacearum GMI1000]
Length = 324
Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 104/289 (35%), Gaps = 15/289 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSIVKGAWLVLAGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF----SSNGVEALRISL 116
+ + G A+ + A G +A+ A ++ L+ SL
Sbjct: 70 EIFGQIQGLV---GAQGAAAVEAVLAATRRSGHGLFAAITAMVLLVVGATTVFSELKDSL 126
Query: 117 NRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ + V + +RL+SF +L+ + L++ V + + + +
Sbjct: 127 DELWDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAGLAVVERFWGAIWTG-S 185
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ + + + + + LP + + G + T + + +G L Y
Sbjct: 186 VFAIAANALSMAFSFAVVSLLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLY 245
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 246 LGN-SAVASSYGAAGSVVALMLWIYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|284163552|ref|YP_003401831.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284013207|gb|ADB59158.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 391
Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 95/273 (34%), Gaps = 16/273 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M V ++ + E MA I+ +A LS+ P ++ + +G
Sbjct: 1 MNVRRDRVETVLRAIVHELKVERVTFMAGSIAYNAFLSLLPLLLLLLTIISSVGDEGLER 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + A A + +E+ A + A +L ++ + Y
Sbjct: 61 GLLSITRAALTPGAADVLVEELQTSTAGASLLGLAALLWGAL----RIFRSLDMAFSDIY 116
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ ++ + + ++ + A W
Sbjct: 117 ESQAENTFLDQLRDGLVVLVSVAAVVAVVIVLESLGGGLEAVGG----------TAGWLL 166
Query: 181 RIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++A + L+ ++ P K ++ +LPGV T + V F Y+ + + +
Sbjct: 167 HRLLLVVATGVALVPMYYLFPDEPKITVVEVLPGVGVTAVGLVTAESAFRLYVE-YGSTN 225
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
L+ ++ + +LY+ G+ ++GA +NA +
Sbjct: 226 AENGLLSGVIVLMTWLYVSGLVILVGAAVNAVL 258
>gi|304397978|ref|ZP_07379854.1| ribonuclease [Pantoea sp. aB]
gi|304354689|gb|EFM19060.1| ribonuclease [Pantoea sp. aB]
Length = 339
Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 91/263 (34%), Gaps = 11/263 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A++ F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 52 RALDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTDIINKIVSSIS 111
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS--- 127
+ + + L A Y N + LR ++ ++ V E +
Sbjct: 112 DPTLATTLKNTVNTAIQQRATVGITGLLLALYSGLNWMGNLREAIRAQSRDVWERKPDDK 171
Query: 128 --WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGRIY 183
+ + + + LVI + A A + + L +
Sbjct: 172 EKIWKRYIRDLLSLAGLMLALVITLSLTSVAGSAQASIVSALGLDGIDWLRPALTIIATS 231
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+++A ++ +++ LP K + ++ G + I + V + T + +T S A
Sbjct: 232 ISVMANYLLFLWIFWILPRHKPRKKALFRGTLLAAIGFEVIKFVMTLTLPKMAT-SPSGA 290
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
S++ + F Y + A
Sbjct: 291 AFGSVLGLMAFFYFFARLTLFCA 313
>gi|300115314|ref|YP_003761889.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299541251|gb|ADJ29568.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 294
Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 106/269 (39%), Gaps = 10/269 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I F G +A ++ ALLS+ P + L+ + + Q + D +
Sbjct: 18 FLVRVIVGFRANQGLLLAGAVAYYALLSLVPMFALILVGLSQVIASDQLLEATHDYLALI 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMR 126
P A+ +T +I + + + + +FSS L +++ + R
Sbjct: 78 APGQ-AEVLTQQIAEFVENWKV-IGVVGFFVLLFFSSMAFTVLENAISVIFSHRVAIHRR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT- 185
+ ++ ++ F Y+ L + L +++ V A+ + P LG++ + IY
Sbjct: 136 HFLVSAILPFCYLCLLGLGLFVVTLVSSALHTLDD---RTVPVLGSIFGSYYAIGIYIVG 192
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + L ++L +P + L G + + W + Y T S + +Y
Sbjct: 193 LLGEILLLTSLYLVMPVGRIAFRHALIGGMVATLLWELTRQGLVWYFSTLSFVNIIYGSF 252
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A+++ L+ L + + GA++ A
Sbjct: 253 AAVVMILLSLEAAAIIVLFGAQVIAEYER 281
>gi|172040110|ref|YP_001799824.1| hypothetical protein cur_0430 [Corynebacterium urealyticum DSM
7109]
gi|171851414|emb|CAQ04390.1| putative membrane protein [Corynebacterium urealyticum DSM 7109]
Length = 361
Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 96/269 (35%), Gaps = 16/269 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
FD I E + E+ G A+ I+ ++LS+FP + + + + V+
Sbjct: 36 WPWFDHIMRMNERYGEQGGNQFAAGITYFSVLSIFPLTMLVLATVAIILANNQELLDKVM 95
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D V + + + + K +F+I L A + + + LRI + ++V
Sbjct: 96 DQVTSMGSGEMGDTLGTIVEGAID-QRKSVFSIGLLLALWSGLSWMNHLRIGASEMWKVD 154
Query: 124 EMR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWN 179
++ +L +L + LV+ V L L + I +
Sbjct: 155 NSPENFIKGKLSDLLGLLGLLLALVVAFAVTTIGNSGLTEKLLGVVGLDEVPGIRFITFL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW----VVGAVLFTHYIVTF 235
+ +LA + ++ ++LP AK S I +++ + F++ +
Sbjct: 215 VALVVALLANLLVFFWLMVYLPRAKVPRKSAFKAAIIGAVAFEVFKQFATMFFSNALSNP 274
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ A I+ +V Y + +
Sbjct: 275 AG-----AAFGPIIGVMVLFYFIWRITLY 298
>gi|313764398|gb|EFS35762.1| putative ribonuclease [Propionibacterium acnes HL013PA1]
gi|314918329|gb|EFS82160.1| putative ribonuclease [Propionibacterium acnes HL050PA1]
gi|314920139|gb|EFS83970.1| putative ribonuclease [Propionibacterium acnes HL050PA3]
gi|314931661|gb|EFS95492.1| putative ribonuclease [Propionibacterium acnes HL067PA1]
gi|314955717|gb|EFT00119.1| putative ribonuclease [Propionibacterium acnes HL027PA1]
gi|314958116|gb|EFT02219.1| putative ribonuclease [Propionibacterium acnes HL002PA1]
gi|315101406|gb|EFT73382.1| putative ribonuclease [Propionibacterium acnes HL046PA1]
gi|327450725|gb|EGE97379.1| putative ribonuclease [Propionibacterium acnes HL087PA3]
gi|327453934|gb|EGF00589.1| putative ribonuclease [Propionibacterium acnes HL083PA2]
gi|328754144|gb|EGF67760.1| putative ribonuclease [Propionibacterium acnes HL087PA1]
Length = 436
Score = 75.6 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSIPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ + K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMTRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|314915389|gb|EFS79220.1| putative ribonuclease [Propionibacterium acnes HL005PA4]
Length = 436
Score = 75.3 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSIPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ + K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMTRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|320008979|gb|ADW03829.1| ribonuclease BN [Streptomyces flavogriseus ATCC 33331]
Length = 313
Score = 75.3 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 101/265 (38%), Gaps = 13/265 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ I+ + L++FP I GA + L + Q + T+ D + P
Sbjct: 23 WRSYETLERVHWARLAAAITFLSFLALFPLIAVGAAIGAALLSPQQLDTIEDKLADQVPG 82
Query: 73 VIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY---RVVEMRSW 128
I+D++ + L A + ++ + + ++R L + V E +
Sbjct: 83 -----ISDQLGIDSLVAHAGTVGVVAGALLLFTGIGWIGSMRDCLRAVWEKDDVDEG-NP 136
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATM 186
+ ++ G ++ + V A+ + + + +++ + M
Sbjct: 137 VVRKIKDAGLLIGLGGAALATLAVSTVASTAIGWTVDRLGIPEDGVGGVLLQLAAVLVAM 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A F+ L+++ LP + ++ + + + + +L Y+ ++ S MY
Sbjct: 197 FADFLILLYLLTLLPGVEPPRRRLIVAGLVGAVGFELLKLLLGSYMRDVASKS-MYGAFG 255
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ ++ A A+
Sbjct: 256 VPIALLLWINFSAKLLLVCAAWTAT 280
>gi|288916243|ref|ZP_06410623.1| ribonuclease BN [Frankia sp. EUN1f]
gi|288352434|gb|EFC86631.1| ribonuclease BN [Frankia sp. EUN1f]
Length = 534
Score = 75.3 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 17/261 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F E+ G +A+ I+ LS+FP ++ GF+ G V+ +P
Sbjct: 23 VVYKFTEDQGGYLAALIAFYGFLSLFPLLLLLTTCLGFVLAGHPDLQEQVVSSALSQFP- 81
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYI 130
+I + +++ + + I + + S A+ +L+ + V + +
Sbjct: 82 IIGDQLRNDVHAL--RGSAAAVAIGLFGSIWGSLGVARAVGNALDTVWAVPRRSRPNPFF 139
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R+ SFG + L + +++ + + A L L +++ +L F
Sbjct: 140 ARVRSFGLIGLLGLGVLLTTVLSAITTRASDLGTGLGVGLQVLAVVLGLVGNTGLVLVAF 199
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF--STYSTMYAGLASI 248
L +LPG + W + Y++ + + +Y A +
Sbjct: 200 QLLTV-------KDVSFRQVLPGAAVAAVGWQLLQSA-GTYLLQYQLQGRTQVYGLFALV 251
Query: 249 MTCLVFLYMLGVFFILGAELN 269
+ + +LY+L V + E+N
Sbjct: 252 LGLVTWLYLLAVVIVFAMEIN 272
>gi|268316269|ref|YP_003289988.1| ribonuclease BN [Rhodothermus marinus DSM 4252]
gi|262333803|gb|ACY47600.1| ribonuclease BN [Rhodothermus marinus DSM 4252]
Length = 322
Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 46/299 (15%), Positives = 92/299 (30%), Gaps = 20/299 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
+R + + + + + A I+ L+++ P +V + G L +
Sbjct: 12 LRRIWQTLRYYLVGLYHLLDRKPVFLWAQAIAFKVLVTIVPVLVLATGVLGRILRQERPF 71
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
TV + P + + + Q L + I L Y + LR L++
Sbjct: 72 QTVARFIRDFLPPYQSDQLIQFLEQ-LQRASGTFTVIGILGLLYATMTLFTTLRGVLSQV 130
Query: 120 YRVV--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + RS L ++ ++ V + I +++ L + +
Sbjct: 131 FDEPWHQGRSILRGYLFDLRMMVQVGGLFLLTFGVSLTIQAINVAGQEWLQRLHLDYVWV 190
Query: 178 WNGR--------IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
G + L ++ F P + + L G + + W F
Sbjct: 191 QEGWRHIIQVLGLLIPYLLSLAMFFQLYYFTPKPRPPVRGALLGAVVAALLWEAAKTAFA 250
Query: 230 HYIVTFSTYSTMYAG--------LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y + + I+ ++Y GV FILGA L Y +K
Sbjct: 251 FYAARSTFFERFANSGISAIGHVFGLILAFGFWVYYSGVVFILGALLVLLYEKYQRDRK 309
>gi|333026655|ref|ZP_08454719.1| putative ribonuclease BN family membrane protein [Streptomyces sp.
Tu6071]
gi|332746507|gb|EGJ76948.1| putative ribonuclease BN family membrane protein [Streptomyces sp.
Tu6071]
Length = 332
Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 96/268 (35%), Gaps = 8/268 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + E + +A+ ++ ++ L++FP + + V +
Sbjct: 16 RLMRTRAWRCYERLDDVRWARLAAAMTFTSFLALFPLLTVAVAVVAGAFGQDRVHDLESR 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P + + ++ A + ++ A + N V ++R SL +R+ E
Sbjct: 76 VKEQVPGIANQLDLQGLVD----NAGTVGLVAGAALLFTGINWVGSMRESLRAVWRLPED 131
Query: 126 R-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ + ++ G ++ ++ A A+ + + + + + +
Sbjct: 132 PGNFLLAKVRDAGVLIGLGAAGLVTVVASAASTTAIGWTARHLGIAEDGVGGVLLRVLSF 191
Query: 185 TMLAL--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ F+ L++V LP + ++ + I + + +L YI ++ + MY
Sbjct: 192 AVAVGTDFLLLLYVLSLLPRVHPRRRRLVFAALIGAIGFELLKLLIGGYISGVASKN-MY 250
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNA 270
+ L+++ + A A
Sbjct: 251 GVFGVPIALLLWINFTAKLLLYCAAWTA 278
>gi|313815935|gb|EFS53649.1| putative ribonuclease [Propionibacterium acnes HL059PA1]
gi|315098593|gb|EFT70569.1| putative ribonuclease [Propionibacterium acnes HL059PA2]
gi|328754607|gb|EGF68223.1| putative ribonuclease [Propionibacterium acnes HL025PA2]
Length = 436
Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 93/265 (35%), Gaps = 13/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F G A+ I+ +L++ P + F + G + + + V+D V G
Sbjct: 35 LLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVVG 94
Query: 69 AWPEVI-AKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR----- 121
E + I I + + F +S L A + V +R + +
Sbjct: 95 LATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFDM 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWN 179
V + R + +L L + ++ + ++ ++ L++
Sbjct: 155 VGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLTL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ AT +A ++ IF++ + K+ IL G + + + V Y+V +
Sbjct: 215 AGLVATTIAGWLLFIFLYTVMTRVKTSWPPILKGSLAAGFALALVQVG-AGYLVRAFNSN 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
SI+ ++ ++ +
Sbjct: 274 KAVQAFGSIIIVMLVFDLVARLILF 298
>gi|327395690|dbj|BAK13112.1| inner membrane protein YhjD [Pantoea ananatis AJ13355]
Length = 339
Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 93/263 (35%), Gaps = 11/263 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A++ F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 54 RALDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTDIINKIVSSIS 113
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS--- 127
+ + + L A Y N + LR ++ ++ V E +
Sbjct: 114 DPSLATTLKNTVNTAIQQRATVGITGLLLALYSGLNWMGNLREAIRAQSRDVWERQPDDK 173
Query: 128 --WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGRIY 183
+ + F + + LVI + A A + + L +
Sbjct: 174 EKIWKRYIRDFLSLTGLMLALVITLSLTSVAGSAQAMIVSALGLDGIEWLRPALTIIATS 233
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+++A ++ +++ LP K + ++L G + + + + + T + +T S A
Sbjct: 234 ISVMANYLLFLWIFWILPRHKPRKKALLRGTLLAAVGFEIIKFVMTLTLPKLAT-SPSGA 292
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
S++ + F Y + A
Sbjct: 293 AFGSVLGLMAFFYFFARLTLFCA 315
>gi|123965342|ref|YP_001010423.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9515]
gi|123199708|gb|ABM71316.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9515]
Length = 314
Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/305 (14%), Positives = 115/305 (37%), Gaps = 26/305 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--F 58
M+ + ++ A E + + D +++ + L S FP ++ ++A + Q
Sbjct: 12 MQRSSTWIIKSLWGACERWSKSDCIDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 71
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I + P + + + + +++ G + A+ + + N +L+
Sbjct: 72 DQEIISIAAQILPPSVVELVETTLFKLID-QGFGAGILGAMFLLFTAGNAYLSLQRGSDR 130
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLV---IMSFVFVAIPLALAY 162
+N A++ R + R+ +F V +V I + + + L
Sbjct: 131 LWEDELPSRRVNSAWQEQASR-FLRNRIEAFLIVFFVGFLMVLDQISANLRMIPTTVLEN 189
Query: 163 VRKFFPALGNLLL---IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
+ K +L + ++ G+ ++ + + + LP+ K + ++PG I I
Sbjct: 190 LSKSSNIFSDLFMKLPLLQVGKFAFPLIGFSLMALLLQALLPSRKVPLKPLIPGSILIGI 249
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG---AELNASMIIYY 276
+ + I++ Y + + +++++LGV G + + ASM +
Sbjct: 250 GLTTLNLAVSKSILSLGVRFQAYGFIGGFLVLTLWVWLLGVILYFGQCWSVVIASMSLIN 309
Query: 277 WRKKP 281
R+
Sbjct: 310 RRRNK 314
>gi|332297717|ref|YP_004439639.1| cyclic nucleotide-binding protein [Treponema brennaborense DSM
12168]
gi|332180820|gb|AEE16508.1| cyclic nucleotide-binding protein [Treponema brennaborense DSM
12168]
Length = 422
Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 51/256 (19%), Positives = 100/256 (39%), Gaps = 9/256 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-LAGFLGAHQFVP 60
+ F ++ FV D AS + L S+ P I+ A L FL A +
Sbjct: 5 KLSFRTFTQTVFLTGSFFVRNDLITYASACAFGFLFSILPVIIMIATILIRFLHASPDIL 64
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSN-GVEALRISLNRA 119
T + + E I I + I VL+V G+F I + ++ + ++ +N
Sbjct: 65 TNLFNFEDIFAETI--DIPEIINSVLSVGGSGIFEIVIGLSIFWMARRFFNSVMQGVNCI 122
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL--AYVRKFFPALGNLLLII 177
+ I++LIS +L V + ++ F+F L +++ F P + +
Sbjct: 123 FHTEAKSQPLISQLISLAGEVLIVVAVAVLIFLFTTGQSILSSSFLTSFIPQFFVRITAL 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
I A ++ LF+ + F K + +VV ++F ++ +
Sbjct: 183 LLKFIPAGLMFLFVTVSF--RVASGTKPPWLLCTIASGLCTAVFVVFQLIFAAFVDM-TK 239
Query: 238 YSTMYAGLASIMTCLV 253
Y+ +Y L++ + L+
Sbjct: 240 YNLIYGVLSNSIVLLL 255
>gi|300694721|ref|YP_003750694.1| ribonuclease bn [Ralstonia solanacearum PSI07]
gi|299076758|emb|CBJ36097.1| putative ribonuclease BN [Ralstonia solanacearum PSI07]
Length = 323
Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 105/287 (36%), Gaps = 11/287 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + ++ A++ + + + +S L S+ P +V ++AG Q
Sbjct: 10 RSILKGAWLVLAGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRA 119
I + +L GLF + + ++ L+ SL+
Sbjct: 70 EIFGQIQGLVGTQGAAAVEAVLAATRRSGHGLFAAVTAMVLLVVGATTVFSELKDSLDEL 129
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V + +RL+SF +L+ + L++ V A+ + + +G++
Sbjct: 130 WDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAALAVVERFWGAI--WMGSVF 187
Query: 175 LIIWNGRIYA-TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ + A + + + + LP + + G + T + + +G L Y+
Sbjct: 188 AVAADVLSMAFSFAVVALLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLYLG 247
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 248 N-SAVASSYGAAGSVVALMLWIYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|291619367|ref|YP_003522109.1| YhjD [Pantoea ananatis LMG 20103]
gi|291154397|gb|ADD78981.1| YhjD [Pantoea ananatis LMG 20103]
Length = 339
Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 93/263 (35%), Gaps = 11/263 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A++ F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 54 RALDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTDIINKIVSSIS 113
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS--- 127
+ + + L A Y N + LR ++ ++ V E +
Sbjct: 114 DPSLATTLKNTVNTAIQQRATVGITGLLLALYSGLNWMGNLREAIRAQSRDVWERQPDDK 173
Query: 128 --WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGRIY 183
+ + F + + LVI + A A + + L +
Sbjct: 174 EKIWKRYIRDFLSLTGLMLALVITLSLTSVAGSAQAMIVSALGLDGIEWLRPALTIIATS 233
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+++A ++ +++ LP K + ++L G + + + + + T + +T S A
Sbjct: 234 ISVMANYLLFLWIFWILPRHKPRKKALLRGTLLAAVGFEIIKFVMTLTLPKLAT-SPSGA 292
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
S++ + F Y + A
Sbjct: 293 AFGSVLGLMAFFYFFARLTLFCA 315
>gi|170767108|ref|ZP_02901561.1| putative ribonuclease [Escherichia albertii TW07627]
gi|170124546|gb|EDS93477.1| putative ribonuclease [Escherichia albertii TW07627]
Length = 333
Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 98/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + D +
Sbjct: 50 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFILASHPMLLQNIFDKILQN 109
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N LR ++ R V RS
Sbjct: 110 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWTGNLREAIRAQSRDVWERSPQ 169
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 170 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIITALH-LNSIEWLKPTWRLI 228
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G + I + V ++ T+ + + S
Sbjct: 229 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTLLAAIGFEVIKIVMTYTLPSLMK-SP 287
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 288 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 328
>gi|317050030|ref|YP_004117678.1| ribonuclease [Pantoea sp. At-9b]
gi|316951647|gb|ADU71122.1| ribonuclease [Pantoea sp. At-9b]
Length = 335
Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 99/280 (35%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
A+E F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 51 FLRALERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTELINKIVNS 110
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + L A Y N + LR ++ ++ V E +
Sbjct: 111 ISDPNLANTLKNTVNTAIQQRATVGLTGLLLALYSGINWMGNLREAIRAQSRDVWERKPD 170
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
++ + F + + LVI + A A + + + L +
Sbjct: 171 DQEKFWKKYIRDFISLTGLMLALVITLSLTSVAGAAQAAIVQALGLDHIEWLRPALTIIT 230
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K + ++ G + I + V + T + +T S
Sbjct: 231 LIISIFANYLLFLWIFWILPRHKPRKKALFRGTLLAAIGFEVIKFVMTITLPKLAT-SPS 289
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ ++ P
Sbjct: 290 GAAFGSVLGLMAFFYFFARLTLFCAAWIATARYKDDKEMP 329
>gi|145640209|ref|ZP_01795793.1| ribonuclease BN [Haemophilus influenzae R3021]
gi|145274795|gb|EDK14657.1| ribonuclease BN [Haemophilus influenzae 22.4-21]
Length = 208
Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/209 (16%), Positives = 83/209 (39%), Gaps = 9/209 (4%)
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++F + + + + I Q + +K + + ++ + + + +LN + +
Sbjct: 1 MIFTNFAPSASDMVGEYIDQFVLN-SKKMSAVGIISLIAVALMLINNIDRTLNSIWHNSQ 59
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS + I + + L + + + + I + L +
Sbjct: 60 SRSPLSSFAIYWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGL--------KLLSFV 111
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + ++ +P K KI G I + +G FT YIVTF +Y +Y
Sbjct: 112 PFLFTWFIFTLIYAVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGA 171
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
+A++ L+++ + + ++GA+L +++
Sbjct: 172 MATLPIMLLWIQISWLVVLVGAQLASTLD 200
>gi|283787835|ref|YP_003367700.1| hypothetical protein ROD_42851 [Citrobacter rodentium ICC168]
gi|282951289|emb|CBG90984.1| putative membrane protein [Citrobacter rodentium ICC168]
Length = 343
Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 95/281 (33%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LLRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIFSKILTN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 119 VSDPTLAATLKSTINTAVQQRTTVGLVGLGVALYSGVNWMGNLREAIRAQSRDVWERSSQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+I L F ++ V L+I + A + L ++ + R+
Sbjct: 179 DQEKIWIKYLRDFISLIGLLVALIITLSITSVAGSAQQMIISAL-YLDSIEWLKPAWRLI 237
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKRALIRGTFIAAIGFEVIKIIMTYTLPALVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|300698341|ref|YP_003749002.1| ribonuclease BN [Ralstonia solanacearum CFBP2957]
gi|299075065|emb|CBJ54636.1| putative ribonuclease BN [Ralstonia solanacearum CFBP2957]
Length = 323
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 108/287 (37%), Gaps = 11/287 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + + A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSMLKGAWLVFAGAVQQWSAHRAASKGAALSFYTLFSLAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRA 119
+ + G A + + ++A+ + V + L+ SL+
Sbjct: 70 EIFGQIQGLVGTQGAAAVEAVLAATRRSGHGLFAAVTAMVLLVAGATTVFSELKDSLDEL 129
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V + +RL+SF +L+ + L++ V A+ + + +G++
Sbjct: 130 WDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAALAVVERFWGAM--WMGSVF 187
Query: 175 LIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ + + + + + + LP + + G + T + + +G L Y+
Sbjct: 188 AVVADAVSMVFSFAVVALLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLYLG 247
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 248 N-SAVASSYGAAGSVVALMLWVYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|318081022|ref|ZP_07988354.1| ribonuclease BN family membrane protein [Streptomyces sp. SA3_actF]
Length = 331
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 96/268 (35%), Gaps = 8/268 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + E + +A+ ++ ++ L++FP + + V +
Sbjct: 16 RLMRTRAWRCYERLDDVRWARLAAAMTFTSFLALFPLLTVAVAVVAGAFGQDRVHDLESR 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P + + ++ A + ++ A + N V ++R SL +R+ E
Sbjct: 76 VKEQVPGIANQLDLQGLVD----NAGTVGVVAGAALLFTGINWVGSMRESLRAVWRLPED 131
Query: 126 R-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ + ++ G ++ ++ A A+ + + + + + +
Sbjct: 132 PGNFLLAKVRDAGVLIGLGAAGLVTVVASAASTTAIGWTARHLGIAEDGVGGVLLRVLSF 191
Query: 185 TMLAL--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ F+ L++V LP + ++ + I + + +L YI ++ + MY
Sbjct: 192 AVAVGTDFLLLLYVLSLLPRVHPRRRRLVFAALIGAIGFELLKLLIGGYISGVASKN-MY 250
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNA 270
+ L+++ + A A
Sbjct: 251 GVFGVPIALLLWINFTAKLLLYCAAWTA 278
>gi|301167284|emb|CBW26866.1| putative ribonuclease [Bacteriovorax marinus SJ]
Length = 308
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 103/275 (37%), Gaps = 17/275 (6%)
Query: 2 REYFCIVFDIIYDAIEH---FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
++ + + ++ ++ F G +A + LLS P ++ N+ G + A
Sbjct: 16 KKSYDLTKSVLLRLVQGLVLFKRRKGEVIAGASTFFTLLSFAPALLLFINMVGLIIADNA 75
Query: 59 --VPTVIDVVFGAWPEV---IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EAL 112
V+ VV ++P+V I I + L ++ L F+S G+ ++
Sbjct: 76 GARDYVMRVVLESFPKVDSWIYNGIESVVNSQLHDSGLDFLKVAFLI---FASMGISTSI 132
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+N +V L SF + ++ +V++ V P+ + + F
Sbjct: 133 VFGINILSKVDPDGGLLEDDLRSFFTGIGITIYMVLLVCVGHKGPV--QEILQSFSWGRG 190
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+++ N I + + LF + + P+ K G + +++G + Y+
Sbjct: 191 FVILFDNSFISSILSLLF--FSLFYKYCPSIKVATKDAFRGGATFVLCFLIGRSTYWIYV 248
Query: 233 VTF-STYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
F Y + M L+++Y L F GA
Sbjct: 249 KYFKDDLVADYGQFTNFMIALIWIYFLMSCFYYGA 283
>gi|225020582|ref|ZP_03709774.1| hypothetical protein CORMATOL_00589 [Corynebacterium matruchotii
ATCC 33806]
gi|224946528|gb|EEG27737.1| hypothetical protein CORMATOL_00589 [Corynebacterium matruchotii
ATCC 33806]
Length = 367
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 104/263 (39%), Gaps = 10/263 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD + E + G A+ I+ ++LS+FP ++ +A + A + P ++ +
Sbjct: 38 FDHLMLMNERYTSIGGNQFAAGITYFSVLSMFPLLMIVFAVAATVLASR--PDLLGQINN 95
Query: 69 AWPEVIAKPITDEILQVL---AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-VVE 124
I + + +L L+ + + A + N + LR ++++ + ++
Sbjct: 96 QLTTSIGGELGKTLHGILISAVNQRGSLYGVGGITALWTGINWMNNLRYAVSKIWNYSID 155
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+++ IT+L+ ++L V L+I + L+ F L ++ I A
Sbjct: 156 AKNFIITKLVDLLELVLLLVLLIIAVGITAVGNSGLSRSLLAFLRLDHIPGIGAVTVAVA 215
Query: 185 TMLALFIGLIFVH---LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L L + ++ +P + S G I I+ + L + + T + +
Sbjct: 216 LILGLVANFLVIYTLIKIIPHGEVPRKSAFQGSIIGAIALEIFQQLGSVFFAT-AITNPA 274
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A I+ +V Y++ +
Sbjct: 275 GATFGPIIGVMVLFYLIWRIVLY 297
>gi|302519515|ref|ZP_07271857.1| integral membrane protein [Streptomyces sp. SPB78]
gi|302428410|gb|EFL00226.1| integral membrane protein [Streptomyces sp. SPB78]
Length = 331
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 96/268 (35%), Gaps = 8/268 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + E + +A+ ++ ++ L++FP + + V +
Sbjct: 16 RLMRTRAWRCYERLDDVRWARLAAAMTFTSFLALFPLLTVAVAVVAGAFGQDRVHDLESR 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P + + ++ A + ++ A + N V ++R SL +R+ E
Sbjct: 76 VKEQVPGIANQLDLQGLVD----NAGTVGVVAGAALLFTGINWVGSMRESLRAVWRLPED 131
Query: 126 R-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ + ++ G ++ ++ A A+ + + + + + +
Sbjct: 132 PGNFLLAKVRDAGVLIGLGAAGLVTVVASAASTTAIGWTARHLGIAEDGVGGVLLRVLSF 191
Query: 185 TMLAL--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ F+ L++V LP + ++ + I + + +L YI ++ + MY
Sbjct: 192 AVAVGTDFLLLLYVLSLLPRVHPRRRRLVFAALIGAIGFELLKLLIGGYISGVASKN-MY 250
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNA 270
+ L+++ + A A
Sbjct: 251 GVFGVPIALLLWINFTAKLLLYCAAWTA 278
>gi|237740376|ref|ZP_04570857.1| ribonuclease BN [Fusobacterium sp. 2_1_31]
gi|229422393|gb|EEO37440.1| ribonuclease BN [Fusobacterium sp. 2_1_31]
Length = 416
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 92/258 (35%), Gaps = 10/258 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ A E + + + +S +L++ P +L+ + GA ++ I +
Sbjct: 21 MLKRAYEKYRGANSSFWVTSLSFYTILAIVPIFAILVSLSSWFGAKDYIINQIKDIAPLK 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + ++ + L + + + + + N+ + + + RS
Sbjct: 81 SDTLELLTDFSNNLLMDARSNVLAGVGFIFLGWTFIKMFSLIEDAFNQIWHIKKSRSLIR 140
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + + + ++ + + F + ++ + + + + ++
Sbjct: 141 KISDYISFFIFLPLVFITLNGISLF----------FLAKIKDIGFLYYIIKNILPLFSMT 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + L +P K+ I +++++ +F YST+Y G + I
Sbjct: 191 VFFTALFLVMPNTIVKVFPAFVASIIVSVAFLIFQYIFFLLQFLLIGYSTVYGGFSVIFI 250
Query: 251 CLVFLYMLGVFFILGAEL 268
++++ + ILG +
Sbjct: 251 FIIWIRISWFIIILGVHI 268
>gi|238756248|ref|ZP_04617565.1| Inner membrane protein yhjD [Yersinia ruckeri ATCC 29473]
gi|238705551|gb|EEP97951.1| Inner membrane protein yhjD [Yersinia ruckeri ATCC 29473]
Length = 338
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 97/280 (34%), Gaps = 12/280 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 56 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFATVGFILASNPDLLAELINKIVNS 115
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y + + LR ++ R V R+
Sbjct: 116 ISDPSLAATLKNTVNTAIQQRTTVGLTGLVIALYSGVSWMGNLREAIRAQSRDVWERNPQ 175
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+YI F + + L+I + A + + + L +
Sbjct: 176 DVEKFYIRYTRDFISLTGLVLALIITLSLTSIAGSAQSAIVNALGLGGIEWLRPAMTLIA 235
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K ++L G + I + + + T + ++ S
Sbjct: 236 LSISISANYLLFLWIFWILPRHKPPKKALLRGTLIAAIGFEIIKFVMTMMLPRLAS-SPS 294
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ Y K P
Sbjct: 295 GAAFGSVIGLMAFFYFFARLTLYCAAWIAT-AKYKNDKNP 333
>gi|305679954|ref|ZP_07402764.1| putative ribonuclease [Corynebacterium matruchotii ATCC 14266]
gi|305660574|gb|EFM50071.1| putative ribonuclease [Corynebacterium matruchotii ATCC 14266]
Length = 367
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 104/263 (39%), Gaps = 10/263 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD + E + G A+ I+ ++LS+FP ++ +A + A + P ++ +
Sbjct: 38 FDHLMLMNERYTSIGGNQFAAGITYFSVLSMFPLLMIVFAVAATVLASR--PDLLSQINN 95
Query: 69 AWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYR-VVE 124
I + + +L L+ + + A + +N + LR ++++ + +
Sbjct: 96 QLTTSIGGELGKTLHNILITAVDQRGSLYGVGGVTALWTGTNWMNNLRYAISKIWNYSSD 155
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+++ IT+L+ ++L V L++ + L+ F L ++ I A
Sbjct: 156 AKNFVITKLVDLLELVLLLVLLIVAVGITAVGNSGLSRSLLAFLRLDHIPGIGAVTVAVA 215
Query: 185 TMLALFIGLIFVH---LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L L + ++ +P + S G I I+ + L + + T + +
Sbjct: 216 LILGLVANFLVIYTLIKIIPHGEVPRKSAFQGSIIGAIALEIFQQLGSVFFAT-AITNPA 274
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A I+ +V Y++ +
Sbjct: 275 GATFGPIIGVMVLFYLIWRIVLY 297
>gi|158317708|ref|YP_001510216.1| ribonuclease BN [Frankia sp. EAN1pec]
gi|158113113|gb|ABW15310.1| ribonuclease BN [Frankia sp. EAN1pec]
Length = 390
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 15/258 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGAWP 71
A + + G +A+ + A LS FP + ++AGF+ + + + P
Sbjct: 34 RAYGRYTSDGGDRLAASTTYFAFLSFFPIVALVFSIAGFVVDAYPDAQAKLTEQINDYLP 93
Query: 72 EVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWY 129
+ K I + GL + A+ V ALR S+ + E ++
Sbjct: 94 GLADKLDVSTIGHAKVGAGLIGLAGLLLAGLAW-----VSALRDSIRLVWHQSLETGNFI 148
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ RL + +TL+ V A ++ G+ W + A M+AL
Sbjct: 149 MQRLRDIAILTGLGLTLLASLVVTSLATSATGVFLRWVGLEGSTAAA-WATGLLALMVAL 207
Query: 190 FI---GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
I +++ LP ++ +L + + L ++V +T + +Y A
Sbjct: 208 AIDAAVFVYIFWRLPERTNRQR-VLRAAALGAVGIELL-KLLGTWLVGQTTSNPVYGIFA 265
Query: 247 SIMTCLVFLYMLGVFFIL 264
++ L+++ ++ + +
Sbjct: 266 VMVGLLIWINIVMRWMLF 283
>gi|270264560|ref|ZP_06192826.1| putative ribonuclease [Serratia odorifera 4Rx13]
gi|270041696|gb|EFA14794.1| putative ribonuclease [Serratia odorifera 4Rx13]
Length = 339
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 95/280 (33%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + G+
Sbjct: 54 LLRATERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAGLINKIVGS 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 114 ISDPTLASTLKNTVNTAIQQRTTVGLTGLALALYSGISWMGNLREAIRAQSRDVWERNPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
Y F + V L+I + A A + + L +
Sbjct: 174 DQEKLYFKYTRDFISLTGLVVALIITLTLTSIAGSAQAAIVSALGLEGIEWLRPAMTLIA 233
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++LA ++ +++ LP K K ++L G + I + V + T + + S
Sbjct: 234 LSISILANYLLFLWIFWMLPRHKPKKKALLRGTLLAAIGFEVIKFVMTMTLPQVAK-SPS 292
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 293 GAAFGSVIGLMAFFYFFARLTLFCAAWIATAQYKEDKTLP 332
>gi|227883682|ref|ZP_04001487.1| ribonuclease [Escherichia coli 83972]
gi|227839262|gb|EEJ49728.1| ribonuclease [Escherichia coli 83972]
gi|307555625|gb|ADN48400.1| putative tRNA-processing ribonuclease YhjD [Escherichia coli ABU
83972]
Length = 337
Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATELFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V RS
Sbjct: 114 ISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 174 DQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH-LNSIEWLKPTWRLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 233 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|32473153|ref|NP_866147.1| serum resistance protein brkB [Rhodopirellula baltica SH 1]
gi|32397832|emb|CAD73833.1| probable serum resistance protein brkB [Rhodopirellula baltica SH
1]
Length = 326
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 101/276 (36%), Gaps = 24/276 (8%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGA 69
+ F ++ +A+ ++ ++ P + + F L + G
Sbjct: 21 FLKQVFSEFSKDRCSTLAAALAYYTAFALPPLLYLMMTVLTFSLSVMYDSEQATEKAQGI 80
Query: 70 WPEVIAKPI-----TDEILQVLAVPA-------KGLFTISALAAAYFSSNGVEALRISLN 117
++ I ++I ++ K L + + + ++ V AL+ +LN
Sbjct: 81 LQTQASQMIGNPAAVEQIETIMENHEQTSGKWWKTLLSFAGI--LVGATGVVSALQAALN 138
Query: 118 RAYRVVEM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ + V + R +SFG +L L++ V + V + +
Sbjct: 139 QVWEVKPDPENSGIKDMIAKRFLSFGMILGLGFLLLVSLVVSSVLTALGDQVGGWI-GMS 197
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ + N + A L +F+ + F+P A +K + G T I ++VG Y
Sbjct: 198 ETVAHLANFAVQA--LVVFVIFASIFKFMPDAITKWRDVAVGAAVTTILFLVGRYAMQLY 255
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ + A AS+ LV++Y + +LGAE
Sbjct: 256 FSMSEPGAQLGAAAASLAVLLVWVYYTAMIVLLGAE 291
>gi|299070022|emb|CBJ41308.1| putative ribonuclease BN [Ralstonia solanacearum CMR15]
Length = 324
Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 104/289 (35%), Gaps = 15/289 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSIVKGAWLVLAGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF----SSNGVEALRISL 116
+ + G A+ + A G +A+ A ++ L+ SL
Sbjct: 70 EIFGQIQGLV---GAQGAAAVEAVLAATRRSGHGLFAAVTAMVLLVVGATTVFSELKDSL 126
Query: 117 NRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ + V + +RL+SF +L+ + L++ V + + + +
Sbjct: 127 DELWDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAGLAVVERFWGAIWTG-S 185
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ + + + + + LP + + G + T + + +G L Y
Sbjct: 186 VFAIAANALSMAFSFAVVSLLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLY 245
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 246 LGN-SAVASSYGAAGSVVALMLWIYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|293393473|ref|ZP_06637784.1| inner membrane protein YhjD [Serratia odorifera DSM 4582]
gi|291424074|gb|EFE97292.1| inner membrane protein YhjD [Serratia odorifera DSM 4582]
Length = 335
Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 98/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + G+
Sbjct: 54 LLRATERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVGS 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 114 ISDPTLASTLKNTVNTAIQQRTTVGLTGLALALYSGISWMGNLREAIRAQSRDVWERNPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
Y F ++ V L+I + A A + LG++ + +
Sbjct: 174 DQEKIYFKYTRDFISLIGLVVALIITLSLTSIAGSAQAAIVNAL-GLGDIEWLRPAMTLI 232
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A +++F + +++ LP K K ++L G + I + V + T + + S
Sbjct: 233 ALSISIFANYLLFLWIFWMLPRHKPKKKALLRGTLMAAIGFEVIKFVMTMTLPQVAK-SP 291
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 SGAAFGSVIGLMAFFYFFARLTLFCAAWIATAQYKEDKTLP 332
>gi|242241280|ref|YP_002989461.1| ribonuclease [Dickeya dadantii Ech703]
gi|242133337|gb|ACS87639.1| ribonuclease [Dickeya dadantii Ech703]
Length = 332
Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 100/279 (35%), Gaps = 11/279 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A F + G ++ I+ + LS+ P ++ GF+ + +++ + +
Sbjct: 38 LVRASIRFNDRMGSQFSAAITYFSFLSLIPILMVTFAAVGFVLASNPDMLTRLLERIVSS 97
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + L A Y N + LR ++ R V RS
Sbjct: 98 ISDPNLARMLKNTVHTAVRQRTSVGLTGLLIALYSGVNWIGNLREAIRALSRDVWERSPH 157
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGR 181
Y L F ++ + LV+ F+ A A + G L +
Sbjct: 158 EEQKIYYRYLRDFMSLIGLLIALVLTLFLTSIAGSAQAAIVNALGLSGIKWLRPAMTLMT 217
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K + ++L G + + + + T + +T S
Sbjct: 218 LLISIFANYLLFLWILWVLPGHKPQRAALLRGTLMAAVGFEILKFAMTMVLPQLAT-SPS 276
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A S++ + F Y + + A A+ +KK
Sbjct: 277 GAAFGSVIGLMTFFYFFALLTLFCAAWIATAEKKSNKKK 315
>gi|254526818|ref|ZP_05138870.1| ribonuclease BN family protein [Prochlorococcus marinus str. MIT
9202]
gi|221538242|gb|EEE40695.1| ribonuclease BN family protein [Prochlorococcus marinus str. MIT
9202]
Length = 304
Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 99/286 (34%), Gaps = 23/286 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--F 58
M+ + ++ A E + + D +++ + L S FP ++ ++A + Q
Sbjct: 1 MQRSSTWILKSLWGACERWSKSDCVDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I + P + + + ++ G + A+ + + N +L+
Sbjct: 61 DQQIIAIAAQLLPPSVVDLVETTLFNLID-QGFGAGILGAMFLLFTAGNAYLSLQRGSDR 119
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV-- 163
N A+RV R + R+ +F V +V+ + +
Sbjct: 120 LWEDEIPSKKANAAWRVQASR-FLRNRVEAFLIVFFIGFLMVLDQISANLRMIPSNVLEN 178
Query: 164 ----RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
L L ++ G+ ++ + + + LP+ K + +LPG I
Sbjct: 179 LSKSNNLISDLLLKLPLLQVGQFAIPLIGFSLMALLLQALLPSRKVPLKPLLPGSFLIGI 238
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + I++ Y + + +++++LGV G
Sbjct: 239 GLTTLNLAVSKSILSLGARFQAYGFIGGFLVLTLWVWLLGVILYFG 284
>gi|167947537|ref|ZP_02534611.1| putative ribonuclease BN [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 168
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 51/139 (36%)
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ A ++L + V + F ++ + +L + ++
Sbjct: 5 WSTGAILSLGPILIVVSVGVTSYLVSLPIFIEDATVVQLRTRLLGVMPVLISALAFTLLY 64
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+P + G + + + F Y+ F TY +Y +A+I L+++++
Sbjct: 65 ALVPNRNVPLRHAFAGGVLAALLFETAKRGFALYVTQFPTYEAIYGAMAAIPIFLIWIWL 124
Query: 258 LGVFFILGAELNASMIIYY 276
+ +LGAE + IY
Sbjct: 125 SWLVTLLGAEFTYCLGIYR 143
>gi|296138679|ref|YP_003645922.1| ribonuclease [Tsukamurella paurometabola DSM 20162]
gi|296026813|gb|ADG77583.1| ribonuclease [Tsukamurella paurometabola DSM 20162]
Length = 332
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/265 (13%), Positives = 94/265 (35%), Gaps = 7/265 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVI 63
FD + A E + ++ G + I+ ++ ++FP + ++ G+ + + + +
Sbjct: 9 WPWFDHLMAAAERYQDKKGDYFGAGITYFSVFALFPLAMVAFSVGGYVLINDAELLAELK 68
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ A E + ++++ + + + + +R +L +
Sbjct: 69 MEINSAISEESLRKSVNDLIDQAIGSRGTVGIVGLAGGLWAGLGWMSNVRAALTAMWDSD 128
Query: 124 -EMRSWYITRLISFGYVLLASVTLVIMSFVFVAI--PLALAYVRKF-FPALGNLLLIIWN 179
+++ T+L G ++ V +V + PL + + L ++
Sbjct: 129 VPKQNFVKTKLQDLGALVGLFVVIVACIALMAVGSSPLTGKILASMGLGDVPGLQGLVTT 188
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ T+LA + FV LP + + L + T +++ + + I
Sbjct: 189 ATVIVTLLAGWALWTFVIAKLPRVQFPWRNALRAGLLTSVAFYIFMQVAALLIGNTMKGP 248
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
A I+ ++F+Y +
Sbjct: 249 AG-ATFGPILGIMLFIYFTARIVLF 272
>gi|157412450|ref|YP_001483316.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9215]
gi|157387025|gb|ABV49730.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9215]
Length = 304
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 99/286 (34%), Gaps = 23/286 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--F 58
M+ + ++ A E + + D +++ + L S FP ++ ++A + Q
Sbjct: 1 MQRSSTWILKSLWGACERWSKSDCVDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I + P + + + ++ G + A+ + + N +L+
Sbjct: 61 DQQIIAIAAQLLPPSVVDLVETTLFNLID-QGFGAGILGAMFLLFTAGNAYLSLQRGSDR 119
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV-- 163
N A+RV R + R+ +F V +V+ + +
Sbjct: 120 LWEDEIPSKKANAAWRVQASR-FLRNRVEAFLIVFFIGFLMVLDQISANLRMIPSNVLEN 178
Query: 164 ----RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
L L ++ G+ ++ + + + LP+ K + +LPG I
Sbjct: 179 LSKSNNLISDLLLKLPLLQVGQFAIPLIGFSLMALLLQALLPSRKVPLKPLLPGSFLIGI 238
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + I++ Y + + +++++LGV G
Sbjct: 239 GLTTLNLAVSKSILSLGARFQAYGFIGGFLVLTLWVWLLGVILYFG 284
>gi|84516767|ref|ZP_01004125.1| putative ribonuclease protein [Loktanella vestfoldensis SKA53]
gi|84509235|gb|EAQ05694.1| putative ribonuclease protein [Loktanella vestfoldensis SKA53]
Length = 101
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 197 HLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ F P +S+ + G + + W+ + + Y+ F++Y+ +Y + +++ +++L
Sbjct: 14 YRFGPVRIESRGRWVTLGALVVIVLWIAASAGLSFYLTNFASYNEVYGSIGAVIGMMLWL 73
Query: 256 YMLGVFFILGAELN 269
Y+ +LGA LN
Sbjct: 74 YVSAYLILLGAALN 87
>gi|223040120|ref|ZP_03610400.1| ribonuclease BN [Campylobacter rectus RM3267]
gi|222878597|gb|EEF13698.1| ribonuclease BN [Campylobacter rectus RM3267]
Length = 285
Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 97/274 (35%), Gaps = 14/274 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPT 61
E I A+ ++ AS +S +LS+ P ++ +L + + + +
Sbjct: 7 EKIRQTLKIWLTAMLKIKDKQLLHYASSLSFHTMLSIIPVLLISLSLFTQMPSFRVYYTK 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +F + I++ I L + G+ + A+ + S +NR
Sbjct: 67 IKEFIFAQLLPSNQEAISNYIETFLQNSSSLGILGLGAI--IFTSIMFFADYEYVINRIM 124
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R ++ + + + LA + L + ++ L + N
Sbjct: 125 HTS-SRKFWNSLSAYWTLITLAPLGLGLSFYLSNLFQDMLN---------SSAYTKWINF 174
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L ++ +L + + + L + W +G +F Y TY +
Sbjct: 175 LSIFPYLIIWAIFCVTYLISINRQIALKNALFSSFVASLIWYLGKNIFVFYAANNKTYLS 234
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y + ++ V++Y+ + F+ G +L A +
Sbjct: 235 IYGSFSVVLLFFVWIYVSWIIFLYGVKLCAYLEK 268
>gi|157149123|ref|YP_001456442.1| hypothetical protein CKO_04962 [Citrobacter koseri ATCC BAA-895]
gi|157086328|gb|ABV16006.1| hypothetical protein CKO_04962 [Citrobacter koseri ATCC BAA-895]
Length = 342
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 97/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + + +
Sbjct: 59 LIRAAERFNDRLGNQFGAAITYFSFLSMIPVLMVSFAAAGFILASHPTLLEDIFNKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V R+
Sbjct: 119 VSDPTLASTLKSTINTAVQQRTTVGLVGLGIALYSGINWMGNLREAIRAQSRDVWERTPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+I L F ++ V L+I + A + L ++ + R+
Sbjct: 179 DQEKIWIKYLRDFVSLIGLLVALIITLSITSIAGSAQQMIISAL-YLDSIEWLKPAWRLI 237
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|327537866|gb|EGF24568.1| ribonuclease BN [Rhodopirellula baltica WH47]
Length = 308
Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 101/276 (36%), Gaps = 24/276 (8%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGA 69
+ F ++ +A+ ++ ++ P + + F L + G
Sbjct: 3 FLKQIFSEFSKDRCSTLAAALAYYTAFALPPLLYLMMTVLTFSLSVMYDSEQATEKAQGI 62
Query: 70 WPEVIAKPI-----TDEILQVLAVPA-------KGLFTISALAAAYFSSNGVEALRISLN 117
++ I ++I ++ K L + + + ++ V AL+ +LN
Sbjct: 63 LQTQASQMIGNPAAVEQIETIMENHEQTSGKWWKTLLSFAGI--LVGATGVVSALQAALN 120
Query: 118 RAYRVVEM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ + V + R +SFG +L L++ V + V + +
Sbjct: 121 QVWEVKPDPENSGIKDMIAKRFLSFGMILGLGFLLLVSLVVSSVLTALGDQVGGWI-GMS 179
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ + N + A L +F+ + F+P A +K + G T I ++VG Y
Sbjct: 180 ETVAHLANFAVQA--LVVFVIFASIFKFMPDAITKWRDVAVGAAVTTILFLVGRYAMQLY 237
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ + A AS+ LV++Y + +LGAE
Sbjct: 238 FSMSEPGAQLGAAAASLAVLLVWVYYTAMIVLLGAE 273
>gi|300714722|ref|YP_003739525.1| membrane protein [Erwinia billingiae Eb661]
gi|299060558|emb|CAX57665.1| Predicted membrane protein [Erwinia billingiae Eb661]
Length = 333
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 88/265 (33%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
A E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 49 FLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTQLINKIVDN 108
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 109 ISDPTLASTLKNTVNTAIQQRTTVGLTGLFIALYSGISWMGNLREAIRAQSRDVWERNEQ 168
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+ F + + L+I + A + + + L +
Sbjct: 169 DKEKIWRRYSRDFISLTGLVLALIITLSLTSIAGAAQDMIVRALGLEGIDWLKPAMTLIA 228
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++LA ++ +++ LP K + ++ G + I + V + T + ++ S
Sbjct: 229 LSISILANYLLFLWIFWILPRHKPRKKALFRGTLLAAIGFEVIKFIMTLTLPKLAS-SPS 287
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 288 GAAFGSVLGLMAFFYFFARLTLFCA 312
>gi|238797059|ref|ZP_04640562.1| Inner membrane protein yhjD [Yersinia mollaretii ATCC 43969]
gi|238719104|gb|EEQ10917.1| Inner membrane protein yhjD [Yersinia mollaretii ATCC 43969]
Length = 328
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 98/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 42 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVNT 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 102 ISDPALAATLKNTVNTAIQQRTTVGLTGLAIALYSGVSWMGNLREAIRAQSRDVWERNPQ 161
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI---IWNG 180
+Y F ++ V L+I + A + + LG++ + +
Sbjct: 162 DQEAFYYRYARDFISLIGLVVALIITLSLTSIAGAAQSAIVNAL-GLGDIEWLRPAMTLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 221 AMSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFVMTMMLPRLAS-SP 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 280 SGAAFGSVIGLMAFFYFFARLTLFCAAWIATAQYAEDKTLP 320
>gi|54022904|ref|YP_117146.1| hypothetical protein nfa9370 [Nocardia farcinica IFM 10152]
gi|54014412|dbj|BAD55782.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 339
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
D + A + + G A+ I+ +LS+FP ++ +AGF+ G + + +
Sbjct: 21 LDHLIRAGGQYQRQRGDYFAAGITYFTVLSLFPLLMVAFAIAGFVLAGNQDLFTELQNKI 80
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEM 125
P + D + Q + + + + + + LR +L + E
Sbjct: 81 VENIPGEFGTQVNDLVDQAV-ESRGTVGVLGLITGLWTGLGWMANLRAALTEQWEGKHED 139
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+W++T+L G ++ V LV+ + L LG + +
Sbjct: 140 GNWFLTKLSDLGALVGLGVALVLSLGLSAVGSSDLGERVLDGLGLGGVPGARLLLTAVSI 199
Query: 186 MLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+LAL LP + S + + + V + + Y+ T S
Sbjct: 200 LLALVASWAVFAWIIARLPREPVTLASAAKAALLAALIFEVFKFVASIYLRTVL-RSPAG 258
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A SI+ +VF Y+ +
Sbjct: 259 ATFGSIIGLMVFSYVTYRIILF 280
>gi|111220632|ref|YP_711426.1| ribonuclease domain-containing protein [Frankia alni ACN14a]
gi|111148164|emb|CAJ59834.1| Putative integral membrane protein; putative ribonuclease domain
[Frankia alni ACN14a]
Length = 417
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 96/271 (35%), Gaps = 21/271 (7%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVI 63
D I A + + G +A+ + A LS FP + + GF+ ++
Sbjct: 26 RPFLDHIIRAYSRYTADGGDRLAASATYFAFLSFFPIVALAFAVTGFVVDAYPDVQDSLT 85
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + + I LA + ++ALR +L +
Sbjct: 86 KQINDYLPGLADRLDVTSIGNAKVGVGIVGLLGLLLAGLAW----IDALRDALRLIWHQD 141
Query: 124 -EMRSWYITRLISFGY----VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
++ + + RL L +LV+ S A L ++ L W
Sbjct: 142 IDVGNIIMRRLRDITVLAGLGLTLLASLVVTSLSTSATGTFLDWI-----GLSGSTAAAW 196
Query: 179 NGRIYATMLALFI---GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I A ++AL I +++ LP + S G + + + V+ +++
Sbjct: 197 VTGILALLVALAIDTAVFLYLFWRLPGQTDRSRSAR-GAVLGAVGLEILKVV-GTWLIGK 254
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+T + +Y A I+ L+++ ++ + + A
Sbjct: 255 TTGNPVYGTFAVIVGLLIWINIVMRWTLFAA 285
>gi|161505851|ref|YP_001572962.1| hypothetical protein SARI_04028 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867198|gb|ABX23821.1| hypothetical protein SARI_04028 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 342
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 95/280 (33%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V R+
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERTPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ V L+I + A + + ++ L
Sbjct: 179 DQEKIWLKYLRDFISLIGLLVALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 239 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|268592242|ref|ZP_06126463.1| putative ribonuclease [Providencia rettgeri DSM 1131]
gi|291312291|gb|EFE52744.1| putative ribonuclease [Providencia rettgeri DSM 1131]
Length = 330
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 91/265 (34%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I ++ F + G + I+ + LS+ P ++F AGF+ + + ++ +
Sbjct: 49 IIRTVQRFNDRMGNQFGAAITYFSFLSLIPVLMFSFAAAGFVLASNPELLEKLVRGISAN 108
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL----NRAYR--VV 123
+ + + + A Y N V LR+++ +
Sbjct: 109 ITDPTLANTLERTIDTAIRQRTTVGLTGLALAVYSGVNWVNNLRLAILAQSRSVWERNED 168
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
E + + F ++ + L++ + A A + + L
Sbjct: 169 EHENIIFRYIRDFFALIGLLIALIVTITLTSVAGSAQATIVSTLGLDGIEWLKPAWTLIG 228
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A F+ +++ LP + + S+ G + I + + + T + ++ S
Sbjct: 229 LTISITANFLLFLWIFWILPRMQHRRRSLFKGTLLAAIGFEIIKSIMTWILPNLAS-SPS 287
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 288 GAAFGSVLGLMAFFYFFARLTLFCA 312
>gi|71905876|ref|YP_283463.1| ribonuclease BN [Dechloromonas aromatica RCB]
gi|71845497|gb|AAZ44993.1| Ribonuclease BN [Dechloromonas aromatica RCB]
Length = 296
Score = 73.7 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 88/255 (34%), Gaps = 6/255 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + + F G +A I+ ALLSV P ++ + L + + V
Sbjct: 16 QVLKHPLAFVLRILRGFSGNQGLLLAGAIAYYALLSVVPLLILSVFVLSHLVSQVELLDV 75
Query: 63 I-DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY- 120
+ + P + D + G + + +FSS L ++ +
Sbjct: 76 LGRYLEWLVPSQSQAVLADVSGFLQNGIGIGALLLGTM--LFFSSLAFSGLEKAMAIIFF 133
Query: 121 --RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ R + ++ ++ + +V + + L+ ++F ++ F L +
Sbjct: 134 HRGRQKKRHFLVSAVLPYCFVFVLGIALLAVTFASASLQAMAHESIYFLGWEWPLRGVSG 193
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+L L ++L +P ++ + L G + W + Y+ + S
Sbjct: 194 LLFYLLGLLMETAVLTSLYLIIPVGRTLLSHALIGGFSAALLWEALRHVLVWYLTSLSRV 253
Query: 239 STMYAGLASIMTCLV 253
S +Y L + + L
Sbjct: 254 SVVYGSLTTAVVALF 268
>gi|271962809|ref|YP_003337005.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270505984|gb|ACZ84262.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length = 311
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/262 (14%), Positives = 97/262 (37%), Gaps = 10/262 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D + + + + G +A ++ A LS FP I + GF + T+ +
Sbjct: 30 DHLIRTVHRYQIQSGDRLAGAVTYFAFLSFFPIIALAFAVFGFFLSVRPDAIRTLQQAID 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR- 126
P + + +I I + Y V+ALR +L E
Sbjct: 90 QYLPGLADQLPIQQIAD----SRASAGVIGLVGLLYAGLGAVDALRGALREISMTTEPPL 145
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYA 184
++++ +L ++L +T++ V A V ++ +++ IW +
Sbjct: 146 NFFLAKLRDLAALILVGITMIASVLVGGFATQASGTVSEWLGLSQSMIGSGSIWFAGLAV 205
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++LA + + + ++ ++ +L G + +++ + L + + +Y
Sbjct: 206 SILADTVLFVIILRWMGRSRQPFRVVLRGALLGALAFGLLKQLAALILSRTLN-NPIYGV 264
Query: 245 LASIMTCLVFLYMLGVFFILGA 266
A ++ L+++ + + A
Sbjct: 265 FAVMVGLLIWINLSARVILYAA 286
>gi|255321533|ref|ZP_05362691.1| ribonuclease BN [Campylobacter showae RM3277]
gi|255301389|gb|EET80648.1| ribonuclease BN [Campylobacter showae RM3277]
Length = 276
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 93/273 (34%), Gaps = 12/273 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPT 61
E I A+ ++ AS +S +LS+ P ++ +L + + +
Sbjct: 7 EKIKQTLKIWLTAMLKIKDKQLLHYASSLSFHTMLSIIPVLLISLSLFTQMPSFSVYYAK 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + +F I++ I L + L + A + S +NR
Sbjct: 67 IKEFIFAQLLPSNQDAISNYIETFLQNSSS-LGILGLGAIIFTSIMFFADYEYVINRIMH 125
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R ++ + + + LA + L + ++ L + N
Sbjct: 126 TQ-SRKFWNSLSAYWTLITLAPLGLGLSFYLSNLFQDMLN---------SSAYTKWINFL 175
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L ++ +L + + + L + W +G +F Y TY ++
Sbjct: 176 SIFPYLIIWAIFCVTYLISINRQITLKNALFSSFVASLIWYLGKNIFVFYAANNKTYLSI 235
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y + ++ V++Y+ + F+ G +L A +
Sbjct: 236 YGSFSVVLLFFVWIYVSWIIFLYGVKLCAYLEK 268
>gi|157372976|ref|YP_001480965.1| putative ribonuclease [Serratia proteamaculans 568]
gi|157324740|gb|ABV43837.1| putative ribonuclease [Serratia proteamaculans 568]
Length = 339
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 95/280 (33%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + G+
Sbjct: 54 LLRATERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTELINKIVGS 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 114 ISDPTLASTLKNTVNTAIQQRTTVGLTGLALALYSGISWMGNLREAIRAQSRDVWERNPQ 173
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGR 181
Y F + V L+I + A A + + G L +
Sbjct: 174 DQEKIYFKYTRDFISLSGLVVALIITLTLTSIAGSAQAAIVRALGLEGIEWLRPAMTLIA 233
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + V + T + + S
Sbjct: 234 LSISIFANYLLFLWIFWMLPRHKPKKKALLRGTLLAAIGFEVIKFVMTMTLPQVAK-SPS 292
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 293 GAAFGSVIGLMAFFYFFARLTLFCAAWIATAQYKEDKTLP 332
>gi|269467889|gb|EEZ79628.1| hypothetical protein Sup05_1008 [uncultured SUP05 cluster
bacterium]
Length = 263
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 98/259 (37%), Gaps = 11/259 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
+I ++ FV+ G+ A+ +S L +V P + G ++ ++ +F
Sbjct: 1 MIKAVLKRFVKRQGFDSAAILSFDTLFAVVPGLALGLSVFSLSPYFADFQQHLEQFLFAQ 60
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ I Q +A A+ + +++ + + + +N + R W
Sbjct: 61 LLPQNVGLAQEYIQQFIA-QAQAIKGFTSIFLVFAVILLLYEIDKRINLTWHDHHHRHWM 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+S+ +VL LV S F + L N L ++ I+
Sbjct: 120 EG-LVSYLFVLFLGPILVGASLFFSS--------YAMASELFNDLPVMEYAPIFTPFALS 170
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+G ++ +P K + ++ L I + + YI F Y +Y L+ +M
Sbjct: 171 SLGFAVLYYSVPLEKIRFINALKAGIIAAVLLEIIKYAMFTYIQYFPLYELIYGTLSILM 230
Query: 250 TCLVFLYMLGVFFILGAEL 268
++++Y+ + +LG+
Sbjct: 231 LVMLWVYLAWIIVLLGSSF 249
>gi|238783926|ref|ZP_04627943.1| Inner membrane protein yhjD [Yersinia bercovieri ATCC 43970]
gi|238715165|gb|EEQ07160.1| Inner membrane protein yhjD [Yersinia bercovieri ATCC 43970]
Length = 328
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/265 (15%), Positives = 91/265 (34%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 42 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVNT 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 102 ISDPALAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNPQ 161
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+Y F ++ V L+I + A + + + L +
Sbjct: 162 DQEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQSAIVNALGLGGIEWLRPAMTLIA 221
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 222 MSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFVMTMMLPRLAS-SPS 280
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 281 GAAFGSVIGLMAFFYFFARLTLFCA 305
>gi|237728838|ref|ZP_04559319.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226909460|gb|EEH95378.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 342
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 94/280 (33%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRAAERFNDRMGNQFGAAITYFSFLSMIPILMVSFAAAGFILASHPTLLQDIFSKILLN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V R+
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGINWMGNLREAIRAQSRDVWERTPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ V L++ + A + + + L
Sbjct: 179 DQEKIWVKYLRDFVSLIGLLVALIVTLSITSIAGSAQQMIISALYLDGIEWLKPAWRLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G + + V ++ T+ + + S
Sbjct: 239 LTISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAALGFEVIKMIMTYTLPSLVQ-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|259906793|ref|YP_002647149.1| Predicted membrane protein [Erwinia pyrifoliae Ep1/96]
gi|224962415|emb|CAX53870.1| Predicted membrane protein [Erwinia pyrifoliae Ep1/96]
gi|283476579|emb|CAY72407.1| Inner membrane protein yhjD [Erwinia pyrifoliae DSM 12163]
Length = 340
Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 94/280 (33%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
A E F + G + I+ + LS+ P ++ GF+ + +I + G
Sbjct: 53 FLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQSLLTELIGKIVGN 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + L A Y + + LR ++ R V R+
Sbjct: 113 ISDPSLASTLKNTVNTAIQQRTTVGLTGLLVALYSGISWMGNLREAIRAQSRDVWERAPQ 172
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGR 181
+ F ++ + L+I + A A + + + L ++
Sbjct: 173 DQEKIWFKYSRDFISLIGLVLALIITLSLTSIAGAAQASIVRALGLENIEWLRPVMTLIA 232
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K + ++ G + I + + T + ++ S
Sbjct: 233 LSISIFANYLLFLWIFWILPRHKPRKRALFRGTLLAAIGFEAIKFIMTLTLPKLAS-SPS 291
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 GAAFGSVLGLMAFFYFFARLILFCAAWIATAQYQNDPENP 331
>gi|296156021|ref|ZP_06838860.1| ribonuclease BN [Burkholderia sp. Ch1-1]
gi|295893527|gb|EFG73306.1| ribonuclease BN [Burkholderia sp. Ch1-1]
Length = 300
Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 96/261 (36%), Gaps = 4/261 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ ++ F G +A ++ ALLS+ P ++ + + + +
Sbjct: 19 FVLQTLKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRVVPQHVLLAALAHLLQWL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS--- 127
+ + E+ LA A + + L +FSS L +++ + +
Sbjct: 79 VPGQSNALVRELANFLAHRAV-IGWVLLLTMIFFSSLAFTVLENAMSLIFVHRVVVRRRH 137
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ ++ ++ + Y+L V L+I++FV + A F +L + +
Sbjct: 138 FLLSAMLPYCYILFLGVGLLIVTFVSSGLEAIGAEGIDLFGLHVSLQGLSRAVLYLLGLA 197
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L +++ +P + + L G + + W + + Y T S S +Y L
Sbjct: 198 GEIFVLTSIYMVMPVGRPSLKHALFGGVVAAVLWEITRHVLVWYFATLSQVSVVYGSLTM 257
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
+ L L L + GA++
Sbjct: 258 AIVILFSLEWLATLLLFGAQV 278
>gi|310766003|gb|ADP10953.1| Ribonuclease BN [Erwinia sp. Ejp617]
Length = 343
Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 94/280 (33%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
A E F + G + I+ + LS+ P ++ GF+ + +I + G
Sbjct: 53 FLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQGLLTELIGKIVGN 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + L A Y + + LR ++ R V R+
Sbjct: 113 ISDPSLASTLKNTVNTAIQQRTTVGLTGLLVALYSGISWMGNLREAIRAQSRDVWERAPQ 172
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGR 181
+ F ++ + L+I + A A + + + L ++
Sbjct: 173 DQEKIWFKYSRDFISLIGLVLALIITLSLTSIAGAAQASIVRALGLENIEWLRPVMTLIA 232
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K + ++ G + I + + T + ++ S
Sbjct: 233 LSISIFANYLLFLWIFWILPRHKPRKRALFRGTLLAAIGFEAIKFIMTLTLPKLAS-SPS 291
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 292 GAAFGSVLGLMAFFYFFARLILFCAAWIATAQYQNDPENP 331
>gi|120402568|ref|YP_952397.1| putative ribonuclease [Mycobacterium vanbaalenii PYR-1]
gi|119955386|gb|ABM12391.1| putative ribonuclease [Mycobacterium vanbaalenii PYR-1]
Length = 347
Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 103/270 (38%), Gaps = 9/270 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
FD + A E + + G A+ I+ + ++FP ++ G ++ GF+ + + TV++ +
Sbjct: 27 FDHVMRAQERYKDAKGDFYAAGITYFTIFALFPLLMLGFSVGGFVLASQPELLATVVERI 86
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VE 124
A + + + + + + + I AA+ + LR +L++ + + E
Sbjct: 87 RSAVSGELGRQLIELMDSAID-SRGTVGVIGLATAAWAGLGWMANLREALSQMWGLYREE 145
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ T+L +L A +V+ + ++ + + + R+ +
Sbjct: 146 SPGFVRTKLSDLLALLSAFAAIVVTLALTALGNTSVMAGVLARLGIEDAPGLSLMLRLAS 205
Query: 185 TMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++ + LP S + + +++ + + Y+ + T
Sbjct: 206 FAVSVLVSWSLFTWMIARLPRESVSFRSSVRAGMIAAVAFEIFKFFGSVYLRSVVTGPAG 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ +VF Y+ + A A+
Sbjct: 266 -ATFGPVLGLMVFAYITSRLILFSAAWAAT 294
>gi|294634152|ref|ZP_06712705.1| ribonuclease BN [Streptomyces sp. e14]
gi|292829836|gb|EFF88192.1| ribonuclease BN [Streptomyces sp. e14]
Length = 355
Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 103/261 (39%), Gaps = 14/261 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
I F ++ +A+ ++ L++FP ++F + + G + +V++ +P
Sbjct: 23 VIYKFYDDQAAYLAALLTYYGFLALFPLLLFLVAVLSAVLSGNPRLQQSVLNSALSEFP- 81
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-RS-WYI 130
VI I I T+ L +AY + N +A + +LN+ + V R +
Sbjct: 82 VIGDQIGHNIHSFHGNTVA--VTVGVLGSAYGALNVAQAAQHALNKIFAVPRHARPDPFR 139
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+RL ++ L + L++ + + A + F A + I ++L
Sbjct: 140 SRLKGLKFLTLLAAGLLVTTGLSTAA----EWASGVFGARLQTGVRI--AAELLSVLLNA 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS-TMYAGLASIM 249
L+ + L K + + + +W + T+Y+ + Y ++
Sbjct: 194 ALLVGSYRVLTRRKLPLRIMYGPALGAACAWQGLLWVGTYYVDHVLQGATATYGLFGIVL 253
Query: 250 TCLVFLYMLGVFFILGAELNA 270
L ++Y+ + ++ AE++A
Sbjct: 254 GLLAWIYLGALVYVFTAEVSA 274
>gi|111023205|ref|YP_706177.1| tRNA-processing ribonuclease BN [Rhodococcus jostii RHA1]
gi|110822735|gb|ABG98019.1| possible tRNA-processing ribonuclease BN [Rhodococcus jostii RHA1]
Length = 340
Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/262 (16%), Positives = 97/262 (37%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
FD + A + + ++ G A+ I+ ++L++ P ++ +AGF+ G + + + D +
Sbjct: 18 FDHLMRAAQRYQQQKGDYYAAGITYFSVLALIPILMVAFAIAGFVLAGQPELLQELQDSI 77
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-VVEM 125
P + + I +A + + L AAY + LR +L + E
Sbjct: 78 TKNVPGSLGDTLNTVIDSAIA-SRASVGVLGLLGAAYAGLGWMANLRDALTAMWESQRES 136
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + T+L +L + +V+ +A L ++ + R +T
Sbjct: 137 KGFVRTKLGDAAALLGLGLAMVVSLGSSALSSGPVARTVVEVLNLDDVPGVDAGLRALST 196
Query: 186 MLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+++L LP S L + + + + + Y+ +
Sbjct: 197 VVSLVATWAVFAWVIARLPREPVTFRSALKAALLAAVVFEIFKQVGAIYLSAVTAGPAGV 256
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A I+ LVF+Y+ +
Sbjct: 257 A-FGPIIGLLVFIYLTCRMLLF 277
>gi|121606091|ref|YP_983420.1| ribonuclease BN [Polaromonas naphthalenivorans CJ2]
gi|120595060|gb|ABM38499.1| ribonuclease BN [Polaromonas naphthalenivorans CJ2]
Length = 309
Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 104/273 (38%), Gaps = 14/273 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
++ ++ A+ ++ DG M++ +S +LS+ P +V + G+ F+ +
Sbjct: 18 SRLQKIYLPLWRAVNQWIAADGMRMSAAMSFYGVLSLAPLLVLLVAVMGWWLDRSFIESS 77
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAY 120
++ + G E A+ + + ++ A + GV A L+ + R +
Sbjct: 78 LVAQIRGVIGEQGAQVVQQAMTSAKQPSEGITASLFAFGLLLSGATGVFAELQDAFERLW 137
Query: 121 ----RVVEMRSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ W+ RL GY+L L++ V L + + P +
Sbjct: 138 RQGSGETPRQKWWYSASLRLRGVGYILALGFLLLVSLAVSTFSSLLSGWAGTYLP----I 193
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++W ++ + + A K + ++ G + I + VG L +Y+
Sbjct: 194 DKVVWVLNELVSIAFCVALFLGLMRMSSAPKPALRFLVMGSVAGAILFQVGKYLMAYYLS 253
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
T + + Y S++ L+++Y +L A
Sbjct: 254 T-AAVVSAYGAAGSLVVILMWIYFSSGVLLLAA 285
>gi|126695448|ref|YP_001090334.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9301]
gi|126542491|gb|ABO16733.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9301]
Length = 304
Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 103/286 (36%), Gaps = 23/286 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--F 58
M+ + ++ A E + + D +++ + L S FP ++ ++A + Q
Sbjct: 1 MQRSSTWILKSLWGACERWSKSDCVDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I + P + + + + +++ G + A+ + + N +L+
Sbjct: 61 DQQIIAIAAQLLPPSVVELVETTLFKLID-QGFGAGILGAMFLLFTAGNAYLSLQRGSDR 119
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV-- 163
+N A+RV + + R+ +F V +V+ + +
Sbjct: 120 LWEDEIPSKKVNAAWRVQASK-FLRNRVEAFLIVFFIGFLMVLDQISANLRMIPSNVLEN 178
Query: 164 ----RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
L + L ++ G+ ++ + + + LP+ K + +LPG I
Sbjct: 179 LSKSNNLISDLLSKLPLLQVGQFAIPLIGFSLMALLLQALLPSRKVPLKPLLPGSFLIGI 238
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + I++ Y + + +++++LGV G
Sbjct: 239 GLTTLNLAVSKSILSLGVRFQAYGFIGGFLVLTLWVWLLGVILYFG 284
>gi|238761244|ref|ZP_04622221.1| Inner membrane protein yhjD [Yersinia kristensenii ATCC 33638]
gi|238761497|ref|ZP_04622473.1| Inner membrane protein yhjD [Yersinia kristensenii ATCC 33638]
gi|238700471|gb|EEP93212.1| Inner membrane protein yhjD [Yersinia kristensenii ATCC 33638]
gi|238700724|gb|EEP93464.1| Inner membrane protein yhjD [Yersinia kristensenii ATCC 33638]
Length = 329
Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 91/265 (34%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 42 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVNT 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 102 ISDPSLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNPQ 161
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+Y F + + L+I + A + + + L ++
Sbjct: 162 DQEKFYYRYARDFISLTGLVIALIITLSLTSIAGAAQSAIVNALGLGGIEWLRPVMTLIA 221
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 222 LSISIAANYLLFLWIFWILPRHKPKKKALLRGSLIAAIGFEIIKFVMTMMLPRLAS-SPS 280
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 281 GAAFGSVIGLMAFFYFFARLTLFCA 305
>gi|225850322|ref|YP_002730556.1| hypothetical protein PERMA_0768 [Persephonella marina EX-H1]
gi|225646295|gb|ACO04481.1| putative membrane protein [Persephonella marina EX-H1]
Length = 303
Score = 72.9 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 109/277 (39%), Gaps = 16/277 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + F Y A + + ++ IS L+S FP +V L FL +
Sbjct: 19 KPFLKNFFSSFYRAFLDYFKVGFGYHSAAISYFTLMSFFPLLVVLTVLISFLADIN-IQI 77
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+++V+ +P V + + + L+ I + A YF++ +L +L +
Sbjct: 78 ILEVLQRFFPSVTQEFLDLLVT--LSSKRAFFGIIGTVIAFYFATGIFTSLHEALVYVFD 135
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-----------L 170
E+ S T + + + +V L+I+ + + I L V+ F L
Sbjct: 136 GREV-SIKKTAFVYIFGIPVFTVALIIIYIIGLVISSVLETVKSFALWKYLEEIFDVVHL 194
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFL-PAAKSKIMSILPGVIFTWISWVVGAVLFT 229
LL N + FI + ++ +L P K + ++L IF + + F
Sbjct: 195 KFLLDTATNITNVVHYITFFIIIFLIYRYLTPLIKVNMRNVLWSTIFISLILFLLKTGFN 254
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
YI+ S + +Y L+ I L +LYM ++GA
Sbjct: 255 SYIILASKTNPIYGTLSGIFAFLAWLYMSFGAILIGA 291
>gi|295838563|ref|ZP_06825496.1| integral membrane protein [Streptomyces sp. SPB74]
gi|197697812|gb|EDY44745.1| integral membrane protein [Streptomyces sp. SPB74]
Length = 332
Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/268 (13%), Positives = 95/268 (35%), Gaps = 8/268 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + E + +A+ ++ ++ L++FP + + V +
Sbjct: 16 RLMRTRAWRCYERLDDVKWARLAAAMTFTSFLALFPLLTVAVAVVAGAFGQDRVHDLESR 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P + + ++ A + ++ A + N V ++R SL +R+ E
Sbjct: 76 VKEQIPGIADQLDLQGLVD----NAGTVGVVAGAALLFTGVNWVGSMRESLRAVWRLPED 131
Query: 126 R-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL--GNLLLIIWNGRI 182
++ + + G ++ V ++ A+ + + G +++
Sbjct: 132 PGNFLLAKARDTGVLIGLGVAGLVTVVASAVSSTAIGWTTRQLGITEGGAGGVLLRVLSF 191
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ A F+ L++V LP ++ + I + + +L YI ++ S MY
Sbjct: 192 AVAVGADFLVLLYVLSLLPRVHPPRRRLVLAALIGAIGFELLKLLIGGYISGVASKS-MY 250
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNA 270
+ L+++ + A A
Sbjct: 251 GVFGVPIALLLWINFTAKLLLYCAAWTA 278
>gi|289641087|ref|ZP_06473255.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
gi|289509028|gb|EFD29959.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
Length = 375
Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 91/251 (36%), Gaps = 13/251 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGAWP 71
+ E+ G +A+ + A LS FP + ++ GF+ + + + P
Sbjct: 34 RGYRRYAEDGGDRLAAAATYFAFLSFFPLVALAFSITGFVVDAYPNVQQGLANQINSYLP 93
Query: 72 EVIAKP-ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWY 129
+ K I + V GL + A+ + ALR ++ + ++ +
Sbjct: 94 GMADKLDIASIGNSKVGVGLIGLAALLLAGLAW-----INALRDAIRIIWHQSVDVGNAL 148
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ RL G ++ + + V I + G+ + + +
Sbjct: 149 VRRLRDLGVLVGLGLIVFASIAVTSVITSVSGTFLEGIGLSGSTAATVLTTLLALGIALA 208
Query: 190 --FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + L+LP+ + ++ G + + V L ++V +T + +Y A
Sbjct: 209 LDVTVFLCLFLWLPSITDRRRAVR-GALLGAVG-VESLKLLGTWLVGMTTDNPVYGTFAV 266
Query: 248 IMTCLVFLYML 258
I+ L+++ ++
Sbjct: 267 IVGLLIWINIV 277
>gi|283835903|ref|ZP_06355644.1| putative ribonuclease [Citrobacter youngae ATCC 29220]
gi|291068074|gb|EFE06183.1| putative ribonuclease [Citrobacter youngae ATCC 29220]
Length = 341
Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 94/280 (33%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRAAERFNDRMGNQFGAAITYFSFLSMIPILMVSFAAAGFILASHPTLLQDIFSKILLN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V R+
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGINWMGNLREAIRAQSRDVWERTPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ V L++ + A + + + L
Sbjct: 179 DQEKIWVKYLRDFVSLIGLLVALIVTLSITSIAGSAQQMIISALYLDGIEWLKPAWRLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G + + V ++ T+ + + S
Sbjct: 239 LTISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAALGFEVIKMIMTYTLPSLMQ-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|332163398|ref|YP_004299975.1| hypothetical protein YE105_C3778 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325667628|gb|ADZ44272.1| hypothetical protein YE105_C3778 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 329
Score = 72.6 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 91/265 (34%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 42 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVNT 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 102 ISDPSLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNPQ 161
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
+Y F + + L+I + A + + + L ++
Sbjct: 162 DQEKFYYRYARDFVSLTGLVIALIITLSLTSIAGAAQSAIVDALGLGGIEWLRPVMTLIA 221
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 222 LSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFIMTMMLPRLAS-SPS 280
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 281 SAAFGSVIGLMAFFYFFARLTLFCA 305
>gi|300870971|ref|YP_003785842.1| ribonuclease BN [Brachyspira pilosicoli 95/1000]
gi|300688670|gb|ADK31341.1| ribonuclease BN, putative [Brachyspira pilosicoli 95/1000]
Length = 539
Score = 72.6 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 94/247 (38%), Gaps = 19/247 (7%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+F ++ +I AI F ++D A+ ++ LS P ++ G + +Q + +
Sbjct: 32 RFFINLYRVITFAITDFFKDDCTIRAASLTYLVTLSFIPALIVGLFVLRIFNIYQNIFIL 91
Query: 63 I-DVVFGAWPEVIAKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRAY 120
I D + P +P+ +IL + I ++ +S + ++ SL + +
Sbjct: 92 IFDWMEKNAP--FYEPMVRQILNIADNTDLASFGIIGVISTLISASLILHNIQKSLIKIW 149
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV S + ++L V++ I + +AL Y+ L
Sbjct: 150 RVKIRTSIPRVAVNYIALLILIPVSIGISFTLITYSSIALYYLPAIVRIL---------I 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV---TFST 237
++A+ + ++F ++ +P K + L + I+ + LF+ Y
Sbjct: 201 SWVTPVIAMSLLVLFSYVLVPQTKVNWSNALISSVLVAIAII---TLFSVYFKLNINVKN 257
Query: 238 YSTMYAG 244
Y ++
Sbjct: 258 YKQIFDS 264
>gi|319938186|ref|ZP_08012584.1| hypothetical protein HMPREF9488_03420 [Coprobacillus sp. 29_1]
gi|319806707|gb|EFW03356.1| hypothetical protein HMPREF9488_03420 [Coprobacillus sp. 29_1]
Length = 267
Score = 72.6 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 87/261 (33%), Gaps = 17/261 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+D + + + A+ +S LL + P A L + +
Sbjct: 2 KHFYDKCVEIYDDYRAVVPSYAAAALSFYLLLIIVPAFSLVAVGTSLLNID------MSL 55
Query: 66 VFGAWPEVIAKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ +++ + I+ VL + + ++ + + Y S GV + Y+
Sbjct: 56 IENIIQQIVMPEYSAMIIDVLESRSVNTVALVTMIISIYTVSRGVGNIYEISKNMYQEDR 115
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
S + +F + + + + V PLA + N+L ++ R
Sbjct: 116 DESLISYYIYTFKVTIFLLLLFIGIIAVMALGPLAYIF---------NILYSLFGIRHIF 166
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L+ +++ +P ++ G + +V Y F+ + ++Y
Sbjct: 167 LYFLMVFCLMSIYMIVPRIRTHHSDAFQGALVASALMLVLYYGLNIYF-QFADFQSVYGP 225
Query: 245 LASIMTCLVFLYMLGVFFILG 265
L+ I+ L F +G
Sbjct: 226 LSFIVVILFVFDWAAEIFYIG 246
>gi|269795867|ref|YP_003315322.1| hypothetical protein Sked_25840 [Sanguibacter keddieii DSM 10542]
gi|269098052|gb|ACZ22488.1| predicted membrane protein [Sanguibacter keddieii DSM 10542]
Length = 375
Score = 72.6 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 107/278 (38%), Gaps = 10/278 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A+ + + +G + I+ SA+ SVF + G + + + +VID V A
Sbjct: 37 LARALTRYGQVNGALLCGGIAYSAIFSVFAGLTIGFTVFMRFLGNNDELLDSVIDSVNTA 96
Query: 70 WPEVIAKP-------ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
P ++ + D V + +S + + + + A+++++ + +
Sbjct: 97 LPGMLQTVSGDSTTGLIDPQELVTSTSLSVASIVSVVVLLVSAISCMGAVQVAVRAMFGL 156
Query: 123 VEM-RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + ++ G ++ + ++ + + + + +++ G ++
Sbjct: 157 PPGVGNPVLVKVRQLGGFVVIGLAVLASAVIGIVVGSVSSWLLDLLGLEGTGRYLLPVLG 216
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + + L A +L G + + + V L T + + ++ + +
Sbjct: 217 LLVAFLVDVGTFVLIVRLLSAVHPARRDLLLGAVVAAVGFGVIRFLGTSVVASSASTNPV 276
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A+I+T L+++ + + A ++A + + K
Sbjct: 277 LTSFAAIITLLIWINLSARILLTAAAISADLPLELLEK 314
>gi|224543596|ref|ZP_03684135.1| hypothetical protein CATMIT_02805 [Catenibacterium mitsuokai DSM
15897]
gi|224523468|gb|EEF92573.1| hypothetical protein CATMIT_02805 [Catenibacterium mitsuokai DSM
15897]
Length = 355
Score = 72.6 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 82/242 (33%), Gaps = 22/242 (9%)
Query: 28 ASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
++ +S ++ + P A + L V + + A+ I D +
Sbjct: 24 SAALSFYLIILLIPATTIIAVVTSSLHIS--VEFLEMCIKEFIKPAYAEMILDTL----- 76
Query: 88 VPAKGLFTISALAAAYFS---SNGVEALRISLNRAYRVVEMR-SWYITRLISFGYVLLAS 143
L T+S L + S G+ + + + V E S + F +L
Sbjct: 77 -KGNSLNTVSILVFIWSFYAVSRGIGNIYDISKKMFAVEERSESVIAWYIYVFKVTMLLL 135
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
TL+I + P++ + + L I R L + + + +++ +P
Sbjct: 136 GTLLISIVLLATGPISRVF---------HFLYGIAFMRFVLLFLIMVLFFMAIYMIVPRE 186
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ L G T V+ + +Y ++ +++Y L SI L F
Sbjct: 187 RITYHEALQGAFVTSGGIVILYIALNYYFK-YADLTSLYGPLTSICVILFVFDWASEIFY 245
Query: 264 LG 265
+G
Sbjct: 246 VG 247
>gi|169351596|ref|ZP_02868534.1| hypothetical protein CLOSPI_02376 [Clostridium spiroforme DSM 1552]
gi|169291818|gb|EDS73951.1| hypothetical protein CLOSPI_02376 [Clostridium spiroforme DSM 1552]
Length = 266
Score = 72.6 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 100/266 (37%), Gaps = 17/266 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ ++ I I ++ + + ++ ++S+ P A L+
Sbjct: 7 MKKVINNIYIQINYKISNYRRKVSKNASISLAYYLIMSIVPICSLCAFLSSLFNID---- 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRA 119
+ + E + ++ + L + + + + + Y S G+ +
Sbjct: 63 --LSNLEVLLTEYLTPEFSNIVTSSLTAKHISISSMVVLIISLYVVSKGINQMYEISKTL 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ R++ + R+I+ L+ + L++++ + IP+ +++ L I+
Sbjct: 121 FNYTSNRNFIVERMITVFKTLIVLILLMLITSLLAFIPIINSFIN---------LSNIFI 171
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
L LFI L ++ +P K + + G I ++ + +Y S Y+
Sbjct: 172 FDNTYLFLVLFILLSLIYKIIPGVKVAWIDTMKGTAIASILLLLLILGLKYYFS-ISDYT 230
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
T+Y LAS + ++ + +G
Sbjct: 231 TVYGPLASFVVIMITFMFVSEIIYIG 256
>gi|238793271|ref|ZP_04636898.1| Inner membrane protein yhjD [Yersinia intermedia ATCC 29909]
gi|238727439|gb|EEQ18966.1| Inner membrane protein yhjD [Yersinia intermedia ATCC 29909]
Length = 325
Score = 72.6 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 91/265 (34%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 42 IIRATDRFNDRMGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVNT 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 102 ISDPTLATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNPQ 161
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
+Y F + + L+I + A + + + L ++
Sbjct: 162 DQEKFYYRYARDFISLTGLVIALIITLSLTSIAGAAQSAIVDALGLGGIDWLRPVMTLIA 221
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 222 LSISIAANYLLFLWIFWILPRHKPKKKALLRGTLVAAIGFEIIKFVMTMMLPRLAS-SPS 280
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 281 GAAFGSVIGLMAFFYFFARLTLFCA 305
>gi|237753082|ref|ZP_04583562.1| tRNA-processing ribonuclease BN [Helicobacter winghamensis ATCC
BAA-430]
gi|229375349|gb|EEO25440.1| tRNA-processing ribonuclease BN [Helicobacter winghamensis ATCC
BAA-430]
Length = 268
Score = 72.6 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 97/270 (35%), Gaps = 11/270 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ + F++ D AS +S + ++ P ++ +L L +++ + ++
Sbjct: 1 MLLRYLYAFLKGDLLYFASSLSFYTIFALLPMLLVVFSLVATLPDFKEYIESFKSLIIEN 60
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + L + L + L A S + + + + R ++
Sbjct: 61 FIPTHSDVFLQYLDGFLKN-STKLGGMGLLYAFITSILFFRNYQNITTKIFH-SKGRGFW 118
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + ++ F+ A + LG + W R+ L +
Sbjct: 119 DSLSVYWTCMTLFPLGVLFSIFLS-------AKAYAYLDGLGYSTYLAWLFRLIPYFL-I 170
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+I + K + L + T + W F +Y+ Y T+Y + ++
Sbjct: 171 WIVFFMLFKISANTKISTKNTLLSSLITALLWSFCKWGFVYYVFYNKAYLTLYGSFSIVL 230
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y+ + G L+ + + ++
Sbjct: 231 FLFIWVYLSWAILLFGMGLSRGIDEMFVKE 260
>gi|310829420|ref|YP_003961777.1| YihY family protein [Eubacterium limosum KIST612]
gi|308741154|gb|ADO38814.1| YihY family protein [Eubacterium limosum KIST612]
Length = 274
Score = 72.6 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/274 (11%), Positives = 105/274 (38%), Gaps = 2/274 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++++ + H +A+ +S LL+ PFI+ N + V++
Sbjct: 2 KLLYEFYFFVKNHKKNYSILNLAAQLSYRVLLAFIPFIMLIYNFFSWFA-QGLNDQVLES 60
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSN-GVEALRISLNRAYRVVE 124
+ +P + + I ++S V +L +++N+ + E
Sbjct: 61 LKVLFPGFLDEMFNTAAANAAGPQTSHWANIVFGFFILYASVCAVRSLILTINKVMLIPE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R++++ ++ Y+++ + ++++ ++++ ++ + +
Sbjct: 121 KRNYFLVWGLAVLYLVILVILILVVFYLYIFTQKISTSFFEYINLSDIFIKFWQGFTLIY 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + ++++ P+ + LPG +F + W+ L+ +I +++
Sbjct: 181 ISAIIALLVTAIYMYTPSVRMSFFFSLPGGVFVSLGWLSIIGLYEAFIKNHLQIESLFNS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L + ++ +Y+ + G +N ++ R
Sbjct: 241 LEGPFSLIIVVYVFCIILTFGCVINLFLLKKIGR 274
>gi|124265235|ref|YP_001019239.1| BrkB-like serum-resistance protein [Methylibium petroleiphilum PM1]
gi|124258010|gb|ABM93004.1| BrkB-like serum-resistance protein [Methylibium petroleiphilum PM1]
Length = 294
Score = 72.6 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/270 (13%), Positives = 87/270 (32%), Gaps = 12/270 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFG 68
+ A + E+ A+ ++ L S+ P +V +AG + G ++ +
Sbjct: 8 RVAVRAWTLWAEQRIGRTAAALAFYTLFSLAPILVIATAVAGAVWGREAVQGDLVTQLSR 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVVEMRS 127
+ + + I T++A+ A F ++ V A LR + + +R
Sbjct: 68 VVGTEGGRLLQEMIANAYRSTRGAWATLAAVGATLFGASAVFAELRAAFEQLWRRDGAPD 127
Query: 128 WYITRLIS---------FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ RL++ V+ L+ V + +
Sbjct: 128 LPLGRLLAALVSARLRGVAVVIGIGFVLLASLVVNSLLVSLGGAFTPMLAGGLLQAGWLL 187
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + + + +F +++ L + Y+ S
Sbjct: 188 VLPWLVSFAVTVTMVALLLRVMLPVRLPRRQLGGVAVFGALAFEAAKGLVSVYLGH-SAV 246
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ + S+ LV+LY++ +L A L
Sbjct: 247 VSTFGAAGSVAILLVWLYVVACVVLLCAVL 276
>gi|326315093|ref|YP_004232765.1| ribonuclease BN [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323371929|gb|ADX44198.1| ribonuclease BN [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 327
Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 16/267 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAW 70
+ A+ +++ DG M++ +S +LS+ P ++ + G+ ++ T +I V
Sbjct: 23 LVRAVNLWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDKSYLETNLIAQVQSVM 82
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYR------VV 123
E A+ + + L +I+ + GV L+ +L R +
Sbjct: 83 GERGAEVVKLALSSAREPSEGRLASIAGFVLLLSGATGVFVELQSALERLWTSGHPPVAD 142
Query: 124 EMRSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-GNLLLIIWN 179
++W+ RL YVL L+I V I + + P G LL ++
Sbjct: 143 NNKAWWRMASLRLRGLAYVLAIGFLLLISLVVSTVIHVVANWASARLPFASGPLLQLVNE 202
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + LF+GL+ K + ++ G + I + VG L + +
Sbjct: 203 LVAFGIAVLLFVGLM---RIGTGPKPPMACLVFGAVVGAILFTVGKQLLAL-YLATAAVV 258
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGA 266
+ Y S++ L+++Y + A
Sbjct: 259 SAYGAAGSLVVLLMWIYFSSAVLLFSA 285
>gi|325962568|ref|YP_004240474.1| ribonuclease [Arthrobacter phenanthrenivorans Sphe3]
gi|323468655|gb|ADX72340.1| ribonuclease, putative [Arthrobacter phenanthrenivorans Sphe3]
Length = 384
Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 101/262 (38%), Gaps = 9/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
A H+ + G M++ I + S+ + G ++AG + + T++ V +
Sbjct: 62 MRAFRHYNLQHGPLMSAGIGFNMFFSITGLLTTGFSIAGLVLRSQPALLDTIVSSVAQSA 121
Query: 71 PEVI----AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM- 125
P ++ + + D + TI+A + S + +R L + +
Sbjct: 122 PGLLKVSGGEGLVDPQDLLNPDGLGWTATIAAAVTVFTSLRWIAGMRDGLRGVLELPPLL 181
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + +L G +LL V LVI + + A +V F + + A
Sbjct: 182 VNPVLLKLRDAGTLLLLGVALVISAGASLVFGTAAGWVTDFLRLDEVVAGPLTTSVKIAV 241
Query: 186 MLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L ++ + + + K ++L G I + + +F+ ++ + + + A
Sbjct: 242 PLVLSWVTAVIMFRLAGSLKLSRRALLEGTILAALGTSIL-QIFSTELLAGAGRNPILAP 300
Query: 245 LASIMTCLVFLYMLGVFFILGA 266
A I+ L++ ++ +++ A
Sbjct: 301 FAIIIGLLIWFNLVSQVYLIAA 322
>gi|282599837|ref|ZP_05972094.2| putative ribonuclease [Providencia rustigianii DSM 4541]
gi|282567355|gb|EFB72890.1| putative ribonuclease [Providencia rustigianii DSM 4541]
Length = 327
Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 94/265 (35%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ + F + G + I+ + LS+ P ++F AGF+ + + ++ +
Sbjct: 46 LIRTAQRFTDRMGNQFGAAITYFSFLSLIPVLMFSFAAAGFVLASNPELLEKLVRGISAN 105
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA------YRVV 123
+ ++ + + A Y N V LR+++ +
Sbjct: 106 ITDPTLANTLEQTIDTAIRQRTTVGLTGLALAVYSGVNWVNNLRLAILAQSRPVWEHNQA 165
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG-NLLLIIWNGR- 181
E + + F ++ + L++ + A A + L +W
Sbjct: 166 EQENIIFRYVRDFFALIGLLIALIVTITLTSVAGSAQATIVSTLGLDSIEWLRPVWTLIG 225
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A F+ +++ LP + + S+L G + I + + + T + + ++ S
Sbjct: 226 LTISIAANFLLFLWIFWILPRMQHRRRSLLKGTLLAAIGFEIIKSVMTWILPSLAS-SPS 284
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 285 GAAFGSVLGLMAFFYFFARLTLFCA 309
>gi|238757388|ref|ZP_04618574.1| Inner membrane protein yhjD [Yersinia aldovae ATCC 35236]
gi|238704427|gb|EEP96958.1| Inner membrane protein yhjD [Yersinia aldovae ATCC 35236]
Length = 329
Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 91/265 (34%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 42 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAGLINKIVNT 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 102 ISDPTLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNPQ 161
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+Y F + + L+I + A + + + L ++
Sbjct: 162 DQEKFYYRYARDFVSLTGLVIALIITLSLTSIAGAAQSAIVNALGLGGIEWLRPVMTLIA 221
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 222 LSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFIMTMMLPRLAS-SPS 280
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 281 GAAFGSVIGLMAFFYFFARLTLFCA 305
>gi|224585837|ref|YP_002639636.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224470365|gb|ACN48195.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 287
Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 69/211 (32%), Gaps = 10/211 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRP--- 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
Y ++ + + LA++ +L +I N +L +
Sbjct: 136 -----KVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRILPLLLSW 190
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
I ++ +P + L G + +
Sbjct: 191 ISFWLLYSIVPTTRVPNRDALVGAFVAALLF 221
>gi|309389373|gb|ADO77253.1| ribonuclease BN [Halanaerobium praevalens DSM 2228]
Length = 424
Score = 72.2 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 110/269 (40%), Gaps = 10/269 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F ++ I + E D + A + LS+ PF++F + V +ID
Sbjct: 17 FDLIILFIKRVYQKAKENDIFIHAMGMVYITTLSIVPFLIFSFYIITIFNFFGKVNIIID 76
Query: 65 VVFGAWPEVIAKPITDEILQ-----VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V +A + ++ +L V + L TIS ++ + + + ++ N
Sbjct: 77 EVKSLILTNLAAGTGESLIDYLEVYILNVDLEQLGTISFVSLIFIIVFMLARVEMTFNNI 136
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + E R + R +SF + + T I + +++ Y+ + + N
Sbjct: 137 WNLKEHRDLFK-RFVSF-WTFITLGTFSITLLLTLSLLFVEKYLGLWLSGDQ---ISQSN 191
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ F+ I ++ F+P K + + +F+ + +++ L+ Y TY+
Sbjct: 192 ILSHILFSFNFLFFISIYYFVPNTDVKPKAAILAGLFSGLLFILSKNLYAIYTANIITYN 251
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L+ I L++LY++ + +LGA +
Sbjct: 252 QIYGPLSIIPIFLLWLYLIWLIILLGAVI 280
>gi|269303063|gb|ACZ33163.1| YihY family protein [Chlamydophila pneumoniae LPCoLN]
Length = 430
Score = 72.2 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 98/262 (37%), Gaps = 3/262 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I +I+ + + A +S LL+ P +VF L+ L + + + F
Sbjct: 24 LLQAIIQSIKVLLHNEASKEACVLSYYGLLTCVPILVFFLRLSQHLFTNLNWKEWLIIKF 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMR 126
+ + I + GL + + ++ + +L LN+ +R
Sbjct: 84 PDYKKPIVAIVEAAYH--ATESNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTSWTP 141
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ F L++ + +I+ ++ I + +L + + ++ +
Sbjct: 142 ISLKRLVSYFVITLVSPMIFIIVCGSWIYITQIMPIQYAKLFSLSHSMTALYFISRFVPY 201
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L++ L + FLP + S L + W+V F V+ YS Y L
Sbjct: 202 LLLYLALFCCYAFLPRVAIQKTSALISTLIIGSVWIVFQKAFFSLQVSIFNYSFTYGALV 261
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ + L+ LY+ + ++ G L
Sbjct: 262 ALPSFLLLLYIYAMIYLFGGAL 283
>gi|123444232|ref|YP_001008200.1| hypothetical protein YE4060 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122091193|emb|CAL14076.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318607895|emb|CBY29393.1| inner membrane protein YhjD [Yersinia enterocolitica subsp.
palearctica Y11]
gi|330862179|emb|CBX72342.1| inner membrane protein yhjD [Yersinia enterocolitica W22703]
Length = 329
Score = 72.2 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 91/265 (34%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 42 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVNT 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 102 ISDPSLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNPQ 161
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
+Y F + + L+I + A + + + L ++
Sbjct: 162 DQEKFYYRYARDFVSLTGLVIALIITLSLTSIAGAAQSAIVDALGLGGIEWLRPVMTLIA 221
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 222 LSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFIMTMMLPRLAS-SPS 280
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 281 GAAFGSVIGLMAFFYFFARLTLFCA 305
>gi|284035019|ref|YP_003384949.1| ribonuclease BN [Spirosoma linguale DSM 74]
gi|283814312|gb|ADB36150.1| ribonuclease BN [Spirosoma linguale DSM 74]
Length = 307
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 108/276 (39%), Gaps = 14/276 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGA-NLAGFLGAH--QFV 59
+ VF ++ A + D MA + + + P ++ + L+G H +
Sbjct: 2 KKVVPVFRLLKQAFSNLQANDPIRMAGATAFFSFFGLPPIVIILSRVLSGLFNDHYQRIS 61
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ D + + A + D ++ L P L +S L S+ ++ SLN+
Sbjct: 62 GQLFDELADLFGSRSANQLEDISERLQLPKPDMALTALSLLLLLIASTTLFTIVKNSLNQ 121
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ V R++ L ++ +++ S + +I LAL + + +L +++
Sbjct: 122 LWNVKRKTGRQAYRVLGDK---LIALAIILGSGLLFSISLALEQLMNQVSSSLSLSSLVY 178
Query: 179 ------NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
G + ++L + + FLP + PG FT + + G + +
Sbjct: 179 YREIMTLGHQFVSILIRMVWFAILFKFLPDVNIPWRVVWPGAFFTSLLFKFGEWVLNKLL 238
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+T S+ MY +I+ L+F++ + F GA
Sbjct: 239 IT-SSVGPMYGRSGAIILVLLFVFYGALMFYYGAAF 273
>gi|90579100|ref|ZP_01234910.1| hypothetical protein VAS14_05323 [Vibrio angustum S14]
gi|90439933|gb|EAS65114.1| hypothetical protein VAS14_05323 [Vibrio angustum S14]
Length = 321
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/277 (14%), Positives = 94/277 (33%), Gaps = 11/277 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D + A + F + G + I+ + LS+ P ++ AGF+ + ++ID +
Sbjct: 36 DHLIRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFILASNASLLNSIIDKIV 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMR 126
+ + + + A Y + + LR ++ + V E +
Sbjct: 96 EGVTDPNLATTLKNTVNIAISQRTTVGLSGLAIALYSGISWMGNLREAIRAQTRDVWERK 155
Query: 127 S-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWN 179
+ + + F + L+ + A A + G L ++
Sbjct: 156 PEDKDHFLLQYVKDFVALTGLVGALIFTVVLTSVAGSAQATIVNALGLEGITWLRPVLTT 215
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ A ++ +++ LP + +++ G + I + T + ++ S
Sbjct: 216 TALTISICANYLMFLWIFWMLPKRRFNRWALMKGTLLAAIGFEAIKFAMTFMLPKLAS-S 274
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A SI+ + F Y + A A+ +
Sbjct: 275 PSGAAFGSIIGLMAFFYFFARLTLFCAAWIATANEHR 311
>gi|126433842|ref|YP_001069533.1| putative ribonuclease [Mycobacterium sp. JLS]
gi|126233642|gb|ABN97042.1| putative ribonuclease [Mycobacterium sp. JLS]
Length = 343
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 107/264 (40%), Gaps = 11/264 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD + A E + + G A+ I+ + ++FP + G ++ GF+ A + P +++ V
Sbjct: 23 FDHVMRAQERYKDSKGDFYAAGITYFTVFALFPLTMVGFSIGGFILASR--PDLLESVEK 80
Query: 69 AWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
++ +++QV+ + I AA+ + LR +L++ + +
Sbjct: 81 RITTAVSGDFGQQLVQVMNAAIDSRTSVGLIGLATAAWAGLGWMANLREALSQMWGLQRG 140
Query: 126 -RSWYITRLISFGYVLLASVTLVIMSFVFVAIP--LALAYVRKFF--PALGNLLLIIWNG 180
R ++ +S L+++ + ++ A+ + + K+ P L L + +
Sbjct: 141 ERPGFLRTKLSDLLALVSTFLALAVTIAITALGDRGLMRRILKWLAIPELPGLSIGLRIA 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++L ++ ++ LP + S + +++ V L + Y+ +
Sbjct: 201 SLLVSLLVSWLLFTWIIARLPRESITLRSSARAGLLAAVAFEVFKQLGSVYLRSVVDGPA 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF Y+ +
Sbjct: 261 G-ATFGPVLGLMVFAYITSRLILF 283
>gi|83815069|ref|YP_445387.1| YihY family protein [Salinibacter ruber DSM 13855]
gi|83756463|gb|ABC44576.1| YihY family protein [Salinibacter ruber DSM 13855]
Length = 369
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/286 (17%), Positives = 101/286 (35%), Gaps = 25/286 (8%)
Query: 10 DIIYDAIE---HFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDV 65
D++Y A+ E+ + A I+ L+++ P ++ + G L V
Sbjct: 21 DVVYYAVGLYLELSEKHVFLWAQAIAFKVLVTIVPIVILATGVVGRVLQGKDAFTAVTRF 80
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA------ 119
+ P ++ + D + Q+ A + I + + +L I+L A
Sbjct: 81 IRELLPGSQSQQLIDFLTQLQDASAT-IVGIGGIGLFLSA----MSLFITLRIAVSNAFE 135
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLIIW 178
+ RS L V+ ++ + V++P + + F +W
Sbjct: 136 QDWHQERSLLWGYLFDVRMVIQVGGLFLMTVGLSVSLPSFVNEVIIGQFLGSEQWAQWLW 195
Query: 179 NGRIYATMLALFIG-----LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I+ T L L + ++ +P + S L G + + W FT Y
Sbjct: 196 GRAIWITGLLLPLLLTTTMFFQLYYLVPQPSPRKRSALAGALLAAVLWETAKQAFTFYAT 255
Query: 234 T--FSTYSTMYAG-LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ T + I+ + ++Y GV ++GA + AS+ +
Sbjct: 256 YVGYGTGTEALGSTFGLIVAFVFWVYFSGVVLMIGAVV-ASLQEHR 300
>gi|256825256|ref|YP_003149216.1| hypothetical protein Ksed_14240 [Kytococcus sedentarius DSM 20547]
gi|256688649|gb|ACV06451.1| predicted membrane protein [Kytococcus sedentarius DSM 20547]
Length = 352
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 95/266 (35%), Gaps = 9/266 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A ++ G A ++LSAL+S+ + + + V+D V G
Sbjct: 32 LVRAGRRYLLAHGNVYAGGVTLSALISLVAALTLAVTAFRMVLGRRPELFDRVVDAVNGT 91
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAA----YFSSNGVEALRISLNRAYRVVEM 125
+P ++ +L + G T++ L + + ++N + LR+S+ + +
Sbjct: 92 FPGLLGDGDVPGVLTASDLVIDGGLTLATLVSLPVLLWTATNAMTYLRMSVRAMFGLAAA 151
Query: 126 R-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+L +LL ++V+ + + A A +V L + + A
Sbjct: 152 PLHPVRAKLWDLVGILLLGSSVVVTAMLSSAATSAARFVLDHAHIDAGTDLTLRIAALAA 211
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + + ++ G + + W V T I + +
Sbjct: 212 AFVVDAVTIALLFRVAAKVRTPWAQRWRGAVLGALGWGALRVAGTSLIGAWDNPLVV--S 269
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
A ++T +V++ + + + A A
Sbjct: 270 FAGLVTLIVWINLAVRWVLFTAAWTA 295
>gi|319442899|ref|ZP_07992055.1| hypothetical protein CvarD4_14169 [Corynebacterium variabile DSM
44702]
Length = 371
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 93/266 (34%), Gaps = 10/266 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
D + + + E+ G A+ I+ ++LS+FP I+ + + A +++
Sbjct: 34 WPWLDHVMHMNDRYGEQGGNYYAAGITYFSVLSIFPLIMLVVAVVAMVLAGN--EDLLND 91
Query: 66 VFGAWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + + + D + +L +F I + + + LR ++ ++
Sbjct: 92 IIDDIKDSASGDLGDTLTDILNTAIGQRGSIFGIGLVLTLWTGLGWIGNLRAGISAMWKA 151
Query: 123 VEMR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIW 178
++ ++ ++ + L + V + L N+ + +W
Sbjct: 152 DLTSDNFIKGKISDLIALIGLLLALGVAFAVTAIGSGGFTWTIIETLNLDNITGIRVFVW 211
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++A ++ + ++ +F P + + G + I F +
Sbjct: 212 IIALLIALVANWVVMFWMLMFFPRTHVPRKAAVRGAVIGAIGLEFFKQ-FATVFFNNTMS 270
Query: 239 STMYAGLASIMTCLVFLYMLGVFFIL 264
+ A I+ +V LY+L +
Sbjct: 271 NPAGAAFGPIIGVMVLLYLLWRITLY 296
>gi|212711567|ref|ZP_03319695.1| hypothetical protein PROVALCAL_02641 [Providencia alcalifaciens DSM
30120]
gi|212685669|gb|EEB45197.1| hypothetical protein PROVALCAL_02641 [Providencia alcalifaciens DSM
30120]
Length = 330
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/265 (15%), Positives = 94/265 (35%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ + F + G + I+ + LS+ P ++F AGF+ + + +I +
Sbjct: 49 LIRTAQRFTDRMGNQFGAAITYFSFLSLIPVLMFSFAAAGFVLASNPELLEKLIRGISAN 108
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL----NRAYR--VV 123
+ ++ + + A Y N V LR+++ +
Sbjct: 109 ITDPTLANTLEQTIDTAIRQRTTVGLTGLALAVYSGVNWVNNLRLAILAQSRTVWERNEA 168
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG-NLLLIIWNGR- 181
E + + F ++ + L++ + A A + L +W
Sbjct: 169 EQENIIFRYVRDFFALIGLLIALIVTITLTSVAGSAQATIVSTLGLDSIEWLKPVWTLIG 228
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A F+ +++ LP + + S+L G + I + + + T + T ++ S
Sbjct: 229 LAISITANFLLFLWIFWILPRMQHRRRSLLKGTLLAAIGFEIIKSIMTWILPTLAS-SPS 287
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 288 GAAFGSVLGLMAFFYFFARLTLFCA 312
>gi|238787708|ref|ZP_04631505.1| Inner membrane protein yhjD [Yersinia frederiksenii ATCC 33641]
gi|238724051|gb|EEQ15694.1| Inner membrane protein yhjD [Yersinia frederiksenii ATCC 33641]
Length = 329
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 91/265 (34%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 42 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAGLINKIVNT 101
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 102 ISDPSLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNPQ 161
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+Y F + + L+I + A + + + L ++
Sbjct: 162 DQEKFYYRYARDFISLTGLVIALIITLSLTSIAGAAQSAIVNALGLGGIEWLRPVMTLIA 221
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 222 LSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFIMTMMLPRLAS-SPS 280
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 281 GAAFGSVIGLMAFFYFFARLTLFCA 305
>gi|188532262|ref|YP_001906059.1| Predicted membrane protein [Erwinia tasmaniensis Et1/99]
gi|188027304|emb|CAO95147.1| Predicted membrane protein [Erwinia tasmaniensis Et1/99]
Length = 334
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 89/265 (33%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
A E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 53 FLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTELINKIVSN 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW- 128
+ + + L A Y + + LR ++ R V R+
Sbjct: 113 ISDPSLASTLKNTVNTAIQQRTTVGLTGLLVALYSGISWMGNLREAIRAQSRDVWERTPQ 172
Query: 129 -----YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGR 181
+ F ++ + L++ + A A + + + L +
Sbjct: 173 DQEKVWFKYTRDFISLIGLLLALIVTLSLTSIAGAAQASIVRALGLENIEWLRPAMTTIA 232
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K + ++ G + I + + T + ++ S
Sbjct: 233 LSISIFANYLLFLWIFWILPRHKPRKKALFRGTLLAAIGFEAIKFIMTLTLPKLAS-SPS 291
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 292 GAAFGSVLGLMAFFYFFARLILFCA 316
>gi|291319981|ref|YP_003515239.1| hypothetical protein MAGa0460 [Mycoplasma agalactiae]
gi|290752310|emb|CBH40281.1| Conserved Hypothetical protein [Mycoplasma agalactiae]
Length = 344
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 105/279 (37%), Gaps = 7/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + +++ + F + + + +L+S P I+ + +
Sbjct: 60 LKKNKNKLSELVGRVYKRFTSREFVFIPVSFAFYSLVSFIPIIMSVSVAISLIPGDFSSL 119
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ P + + I Q L LA+ SS+G S+N Y
Sbjct: 120 FNDEILRRIIPG--LESFINSIPQTWNAKTYILIITLFLASLIISSSGFGKFTYSINYIY 177
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ +++ RL F V+ ++ + I S +++++ + I+++
Sbjct: 178 KHETTGNYFFNRLKGFLIVVCIALYIFISSLLYLSVYKLFGVHKASDLGRSIYFYIVFSL 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ML L++GL + PA K S+LPGV+ + +V +F + Y
Sbjct: 238 YL---MLNLYVGLSLLFKVSPAFKVPWSSLLPGVLIASLPTMVFITIFGYLTSLIDYYK- 293
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ M + + + F LG NA+ ++ +
Sbjct: 294 -FGIFGIFMYIALLVSTMSYFMYLGIITNAAFYKTFYSR 331
>gi|317124332|ref|YP_004098444.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
gi|315588420|gb|ADU47717.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
Length = 352
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 100/258 (38%), Gaps = 7/258 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
Y A + + + +G +A+ + A S+FP + + GF+ G + + D + G
Sbjct: 16 YRAWKRYGDANGDLLAAGVGYFAFFSIFPALALAFTVFGFVLQGRPDLLAAIADSMNGYL 75
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNG-VEALRISLNRAYRVVEMR 126
P ++ + + LA P TI+ + FS G + A+R + + +
Sbjct: 76 PGMVRTESNPDGIISLAAPQSSTLTITGIVSVVTLLFSGLGWISAMRTGIRGVFGLDASP 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++T + VLL + S + ++ LA + ALG +++ + +
Sbjct: 136 GSFVTAKLRDLGVLLTLGLGIAASAIMTSVVGGLAVEIAGWVALGGNAVLVTVVGLLVGV 195
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ + L ++ G + + F ++ +T + + +A
Sbjct: 196 VFDTLLMVVLIRMLSGVPLPWANVRNGAVVGAVLLTAMKY-FGGVLIERATANPLLGAVA 254
Query: 247 SIMTCLVFLYMLGVFFIL 264
+ L +L ++ +L
Sbjct: 255 VAVGLLFWLNLMSRVVLL 272
>gi|317494464|ref|ZP_07952877.1| ribonuclease BN family protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917394|gb|EFV38740.1| ribonuclease BN family protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 327
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 96/265 (36%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A++ F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 43 IIRAVDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTELINKIVSS 102
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 103 ISDPNLANTLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNPQ 162
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
+Y L F + + L++ A A + K + L ++
Sbjct: 163 DQEKFYFRYLRDFISLTGLVIALIVSLSFTSIAGAAQASIVKALGLDGIEWLRPVMTAIA 222
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +++A ++ +++ L LP K K ++L G + I + V + T + + + S
Sbjct: 223 LSISIMANYLLFLWIFLVLPRHKPKKKALLRGTLIAAIGFEVIKFVMTWTLPSLA-RSPS 281
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 282 GAAFGSVIGLMAFFYFFARLTLFCA 306
>gi|118617113|ref|YP_905445.1| integral membrane protein [Mycobacterium ulcerans Agy99]
gi|118569223|gb|ABL03974.1| conserved integral membrane protein [Mycobacterium ulcerans Agy99]
Length = 342
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 111/280 (39%), Gaps = 10/280 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD A + F E+ G A ++ + ++FP ++ G + GF+ A P ++ + G
Sbjct: 23 FDHAMRAAKRFNEQRGGFFAGGLTYYTIFALFPLLMVGFAVFGFVLASH--PDLLKTING 80
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG---VEALRISLNRAYRVVEM 125
E ++ ++ +++ ++ ++ + A S G + LR++L+ +
Sbjct: 81 KIRESVSGALSQQLVGLMNSAIDARASVGLIGLATASWAGLTWMSHLRVALSEMWAHPVQ 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAI----PLALAYVRKFFPALGNLLLIIWNGR 181
R Y+ +S ++ + + +++ A+ P+A P L ++
Sbjct: 141 RVGYVRTKLSDLTAMIGTFLVTMLTIALTALGHLRPMATVLSWFGIPELAIFNVVFRLIS 200
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
I ++L ++ ++ LP ++ + + + I + + + + Y+ T S
Sbjct: 201 ILISVLVAWLMFTWMIARLPRQPGRLGTSMQAGLMAAIGFELFKQVASIYLRTVL-RSPA 259
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A ++ +VF + + A+ Y +P
Sbjct: 260 GAAFGPVLGLMVFANVTAYLVLFATAWAATKDPYSEHIEP 299
>gi|291437678|ref|ZP_06577068.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291340573|gb|EFE67529.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 356
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 89/262 (33%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ ++ ++ +++FP + A + T+ D + P
Sbjct: 77 WRSYERLDRVHWTRLAAAMTFTSFVALFPLLTVAAAIGAATLGQDRQETLQDAITDQVPG 136
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYI 130
+ + + ++ A + I+ + + R L + + E +
Sbjct: 137 ISDEL---NVGDLVQN-AGTVGLIAGTVLLFTGIRWAGSTRECLRAVWELPDEEENPFLR 192
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL- 189
+ V L LV ++ VA L G ++ +A +
Sbjct: 193 RGKDAGVLVGLGGALLVTLAASTVASALVGRISDAIGLEKGGWGGVVLRIAAFAVAVGAD 252
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP + +L I + + + +L + Y+ + S MY +
Sbjct: 253 FLLLLYVLTLLPGVEPTRHRLLVAAITGAVGFELLKLLLSGYMQGVAAKS-MYGAFGVPV 311
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A+
Sbjct: 312 ALLLWINFTAKLVLFCAAWTAT 333
>gi|148377313|ref|YP_001256189.1| hypothetical protein MAG_0450 [Mycoplasma agalactiae PG2]
gi|148291359|emb|CAL58742.1| Conserved Hypothetical protein [Mycoplasma agalactiae PG2]
Length = 344
Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 106/279 (37%), Gaps = 7/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + +++ + F + + + +L+S P I+ + + +
Sbjct: 60 LKKNKNKLSELVGRVYKRFTSREFVFIPVSFAFYSLVSFIPIIMSVSVAISLIPGNFSSL 119
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ P + + I Q L LA+ SS+G S+N Y
Sbjct: 120 FNDEILRRIIPG--LESFINSIPQTWNAKTYILIITLFLASLIISSSGFGKFTYSINYIY 177
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ +++ RL F V+ ++ + I S ++++I + I+++
Sbjct: 178 KHETTGNYFFNRLKGFLIVVCIALYIFISSLLYLSIYKLFGVHKASDLGRSIYFYIVFSL 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ML L++GL + PA K S+LPGV+ + +V +F + Y
Sbjct: 238 YL---MLNLYVGLSLLFKVSPAFKVPWSSLLPGVLIASLPTMVFITIFGYLTSLIDYYK- 293
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ M + + + F LG NA+ ++ +
Sbjct: 294 -FGIFGIFMYIALLVSTMSYFMYLGIITNAAFYKTFYSR 331
>gi|325675586|ref|ZP_08155270.1| tRNA-processing ribonuclease BN [Rhodococcus equi ATCC 33707]
gi|325553557|gb|EGD23235.1| tRNA-processing ribonuclease BN [Rhodococcus equi ATCC 33707]
Length = 341
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/262 (16%), Positives = 95/262 (36%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVV 66
D + A + ++ G A+ I+ +L++ P ++ +AGF G ++V + D V
Sbjct: 19 LDHLVRAGGRYQQQKGDYYAAGITYFTILAIVPILMVAFAVAGFALAGNPEWVDEIQDQV 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEM 125
P + + + I ++ + L AAY + LR +L + E
Sbjct: 79 SNNMPGGLGETVNGLIDSAISA-RTSVGVFGLLGAAYAGIGWITNLRDALTAMWEHTHEA 137
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
++ IT+L FG +L +++ + +A + + ++ + RI +
Sbjct: 138 GNFVITKLKDFGALLGLGGAMLVTFGLSALSNGPVARQVVEWLGVEHVTGVGVLLRITSL 197
Query: 186 MLALFIGLIFVHLFL---PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+++ + + P + S I + V + Y+ S
Sbjct: 198 AISVLATWALLSWVIARMPREAVTLRSAGRAAFAAAIVFEVFRQVGAIYLEAVSQGPAG- 256
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A I+ LVF + +
Sbjct: 257 AAFGPIIGLLVFANLSARLILF 278
>gi|183981211|ref|YP_001849502.1| integral membrane protein [Mycobacterium marinum M]
gi|183174537|gb|ACC39647.1| conserved integral membrane protein [Mycobacterium marinum M]
Length = 342
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 111/280 (39%), Gaps = 10/280 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD A + F E+ G A ++ + ++FP ++ G + GF+ A P ++ + G
Sbjct: 23 FDHAMRAAKRFNEQRGGFFAGGLTYYTIFALFPLLMVGFAVFGFVLASH--PDLLKTIDG 80
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG---VEALRISLNRAYRVVEM 125
E ++ ++ +++ ++ ++ + A S G + LR++L+ +
Sbjct: 81 KIRESVSGALSQQLVGLMNSAIDARASVGLIGLATASWAGLTWMSHLRVALSEMWAHPVQ 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAI----PLALAYVRKFFPALGNLLLIIWNGR 181
R Y+ +S ++ + + +++ A+ P+A P L ++
Sbjct: 141 RVGYVRTKLSDLTAMIGTFLVTMLTIALTALGHLRPMATVLSWFGIPELAIFNVVFRLIS 200
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
I ++L ++ ++ LP ++ + + + I + + + + Y+ T S
Sbjct: 201 ILISVLVAWLMFTWMIARLPRQPGRLGTSMQAGLMAAIGFELFKQVASIYLRTVL-RSPA 259
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A ++ +VF + + A+ Y +P
Sbjct: 260 GAAFGPVLGLMVFANVTAYLVLFATAWAATKDPYSEHIEP 299
>gi|312140774|ref|YP_004008110.1| ribonuclease bn [Rhodococcus equi 103S]
gi|311890113|emb|CBH49431.1| putative ribonuclease BN [Rhodococcus equi 103S]
Length = 341
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVV 66
D + A + ++ G A+ I+ +L++ P ++ +AGF G ++V + D V
Sbjct: 19 LDHLVRAGGRYQQQKGDYYAAGITYFTILAIVPILMVAFAVAGFALAGNPEWVDEIQDQV 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEM 125
P + + + I ++ + L AAY + LR +L + E
Sbjct: 79 SNNMPGGLGETVNGLIDSAISA-RTSVGVFGLLGAAYAGIGWITNLRDALTAMWEHTHEA 137
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
++ IT+L FG +L +++ + +A + + ++ + RI +
Sbjct: 138 GNFVITKLKDFGALLGLGGAMLVTFGLSALSNGPVARQVVEWLGVEHVTGVGVLLRITSL 197
Query: 186 MLALFIGLIFVHLFL---PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+++ + + P + S I + + + Y+ S
Sbjct: 198 AISVLATWALLSWVIARMPREAVTLRSAGRAAFAAAIVFEIFRQVGAIYLEAVSQGPAG- 256
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A I+ LVF + +
Sbjct: 257 AAFGPIIGLLVFANLSARLILF 278
>gi|284008991|emb|CBA75907.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 307
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 102/280 (36%), Gaps = 16/280 (5%)
Query: 2 REYFCIVFDI-----IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--G 54
+++ I+ +I + A E F + G + I+ + LS+ P ++F GF+
Sbjct: 20 KKWIKIICNIPFIAHLIRAAERFNDRMGNQFGAAITYFSFLSLIPVLMFSFAATGFILAS 79
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+ +I + + + + + + A Y N V LR
Sbjct: 80 NPDLLEKLIRGISKSISDPTLAQTLERSIDTAIRQRTAVGLTGLAIALYSGVNWVNNLRQ 139
Query: 115 SLNRAYR------VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
++ R E S + L F +++ + LVI + A A +
Sbjct: 140 AILAQSRDIWERNEDEKESIFFRYLRDFLFLIGLLIALVITITLTSIAGSAQATLVSLLH 199
Query: 169 ALG-NLLLIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
L IW + +++A ++ +++ LP + + +S++ G + I + +
Sbjct: 200 LDSIEWLRPIWTIVGLTISIMANYLLFLWIFWILPHQQFRRISLIKGTLIAAIGFEILKS 259
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ T + ++ S A S++ + F Y + A
Sbjct: 260 IMTWVLPNLAS-SPSGAAFGSVIGLMAFFYFFARLTLFCA 298
>gi|188025424|ref|ZP_02958554.2| hypothetical protein PROSTU_00299 [Providencia stuartii ATCC 25827]
gi|188023722|gb|EDU61762.1| hypothetical protein PROSTU_00299 [Providencia stuartii ATCC 25827]
Length = 328
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 94/265 (35%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ + F + G + I+ + LS+ P ++F AGF+ + + ++ + +
Sbjct: 46 LIRTAQRFTDRMGNQFGAAITYFSFLSLIPVLMFTFAAAGFVLASNPELLERLVRGISAS 105
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR------VV 123
+ + + + A Y N V LR+++ R
Sbjct: 106 ISDPTLANTLERTIDTAIRQRTTVGLTGLALAVYSGVNWVNNLRLAILAQSRPVWERNED 165
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGR 181
E Y L F ++ + L++ + A A + + + L
Sbjct: 166 EHEKIYFRYLRDFLSLIGLLIALIVTITLTSVAGSAQATIVRTLGLDNIEWLKPAWTLIG 225
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +++A F+ +++ LP + + S+L G + I + V + T + ++ S
Sbjct: 226 LTISIIANFLLFLWIFWILPRMQHRRSSLLKGTLLAAIGFEVIKSIMTWILPNLAS-SPS 284
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 285 GAAFGSVLGLMAFFYFFARLTLFCA 309
>gi|292492584|ref|YP_003528023.1| ribonuclease BN [Nitrosococcus halophilus Nc4]
gi|291581179|gb|ADE15636.1| ribonuclease BN [Nitrosococcus halophilus Nc4]
Length = 294
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 97/276 (35%), Gaps = 8/276 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFVPTVIDVVF 67
+ I F G +A I+ LLSV P + L+ + Q + T D +
Sbjct: 16 LRFLLQVIAGFRVNQGLLLAGAIAYYTLLSVVPMFALILVGLSQVVDPDQLLETTNDYLS 75
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---E 124
P + + G+ + L +FSS L +++ +
Sbjct: 76 LLAPGQAEALTEEIAGFLENWKIIGI--VGFLVLLFFSSMAFTVLENAMSIIFFHRVAIH 133
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + ++ ++ + Y+ L + L ++S V + + + G
Sbjct: 134 RRHFLVSAILPYCYLFLLGLGLFVVSLVSSGLHALDERSVTLLGNIFGGYYAV--GIYVL 191
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + L ++L +P + L G + + W + + Y T S + +Y
Sbjct: 192 GLLGEILLLTSLYLVMPLGRIVFSHALIGGVVATLLWEITRQVLVWYFSTLSFVNIIYGS 251
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A+ + L+ L + + GA++ A ++K
Sbjct: 252 FATAVMILLSLEAAAIIVLFGAQVIAEYERIDTQEK 287
>gi|15618112|ref|NP_224397.1| hypothetical protein CPn0188 [Chlamydophila pneumoniae CWL029]
gi|33241526|ref|NP_876467.1| hypothetical protein CpB0191 [Chlamydophila pneumoniae TW-183]
gi|4376458|gb|AAD18341.1| CT132 hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|33236034|gb|AAP98124.1| hypothetical protein CpB0191 [Chlamydophila pneumoniae TW-183]
Length = 430
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 98/262 (37%), Gaps = 3/262 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I +I+ + + A +S LL+ P +VF L+ L + + + F
Sbjct: 24 LLQAIIQSIKVLLHNEASKEACVLSYYGLLTCVPILVFFLRLSQHLFTNLNWKEWLIIKF 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMR 126
+ + I + GL + + ++ + +L LN+ +R
Sbjct: 84 PDYKKPIVAIVEAAYH--ATESNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTSWTP 141
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ F L++ + +I+ ++ I + +L + + ++ +
Sbjct: 142 ISLKRLVSYFVITLVSPMIFIIVCGSWIYITQIMPIQYAKLFSLSHSMTALYFISRFVPY 201
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L++ L + FLP + S L + W+V F V+ YS Y L
Sbjct: 202 LLLYLALFCCYAFLPRVAIQKTSALISTLIIGSVWIVFQKAFFSLQVSIFNYSFTYGALV 261
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ + L+ LY+ + ++ G L
Sbjct: 262 ALPSFLLLLYIYTMIYLFGGAL 283
>gi|292486601|ref|YP_003529469.1| inner membrane protein YhjD [Erwinia amylovora CFBP1430]
gi|292897838|ref|YP_003537207.1| membrane protein [Erwinia amylovora ATCC 49946]
gi|291197686|emb|CBJ44781.1| putative membrane protein [Erwinia amylovora ATCC 49946]
gi|291552016|emb|CBA19053.1| Inner membrane protein yhjD [Erwinia amylovora CFBP1430]
Length = 340
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 89/265 (33%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
A E F + G + I+ + LS+ P ++ GF+ + +I +
Sbjct: 53 FLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTELIGKIVSN 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + L A Y + + LR ++ R V R+
Sbjct: 113 ISDPSLASTLKNTVNTAIQQRTTVGLTGLLVALYSGISWMGNLREAIRAQSRDVWERAPQ 172
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGR 181
+ F ++ + L+I + A A + + + L ++
Sbjct: 173 DQEKIWFKYSRDFISLIGLVLALIITLSLTSIAGAAQASIVRALGLENIEWLRPVMTLIA 232
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K + ++ G + I + + T + ++ S
Sbjct: 233 LSISIFANYLLFLWIFWILPRHKPRKRALFRGTLLAAIGFEAIKFIMTLTLPELAS-SPS 291
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 292 GAAFGSVLGLMAFFYFFARLILFCA 316
>gi|224437776|ref|ZP_03658723.1| tRNA-processing ribonuclease BN [Helicobacter cinaedi CCUG 18818]
gi|313144222|ref|ZP_07806415.1| tRNA-processing ribonuclease BN [Helicobacter cinaedi CCUG 18818]
gi|313129253|gb|EFR46870.1| tRNA-processing ribonuclease BN [Helicobacter cinaedi CCUG 18818]
Length = 294
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 96/264 (36%), Gaps = 12/264 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+E F +V+D + +++ A+ +S + ++ P ++ ++ F+ F +
Sbjct: 17 QEVFTLVWDKLKSIWNFVADKELSFYAASLSFYTIFAIIPLLMIFFSI--FVNLPNF-QS 73
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I+ + I T+ I L + + + Y + R A +
Sbjct: 74 QIEQIRTLILSNILPTHTEVISSYLDTFMQNSSALGMMGLGYTLIASIMFFRNYEYIAAK 133
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + + ++ +V+ ++ + V+K +L ++
Sbjct: 134 MFNSTPRKFFDSLVMYWTMITLFPVVLAFSIYFSGE-----VQKTLKGTADLSVLFDLIP 188
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T + F + KI+++L + T W++ F +Y+ TY ++
Sbjct: 189 YLLTWIMFF----LLFKLSANKPLKILALLVSSVLTTAVWLITKWGFVYYVFYNETYKSV 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILG 265
Y ++ + ++++Y+ + G
Sbjct: 245 YGPISIFLFMMLWIYISWFVLLYG 268
>gi|312170661|emb|CBX78924.1| Inner membrane protein yhjD [Erwinia amylovora ATCC BAA-2158]
Length = 340
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 89/265 (33%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
A E F + G + I+ + LS+ P ++ GF+ + +I +
Sbjct: 53 FLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTELIGKIVSN 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + L A Y + + LR ++ R V R+
Sbjct: 113 ISDPSLASTLKNTVNTAIQQRTTVGLTGLLVALYSGISWMGNLREAIRAQSRDVWERAPQ 172
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGR 181
+ F ++ + L+I + A A + + + L ++
Sbjct: 173 DQEKIWFKYSRDFISLIGLVLALIITLSLTSIAGAAQASIVRALGLENIEWLRPVMTLIA 232
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP K + ++ G + I + + T + ++ S
Sbjct: 233 LSISIFANYLLFLWIFWILPRHKPRKRALFRGTLLAAIGFEAIKFIMTLTLPELAS-SPS 291
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 292 GAAFGSVLGLMAFFYFFARLILFCA 316
>gi|240169089|ref|ZP_04747748.1| integral membrane protein [Mycobacterium kansasii ATCC 12478]
Length = 346
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/262 (15%), Positives = 98/262 (37%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVV 66
FD A + F E G A+ ++ + ++FP ++ G + GF + + + D +
Sbjct: 20 FDHAVRAYKRFSERRGGFFAAGLTYYTIFALFPLLMVGFAVVGFTLSRNDRLLNMTYDRI 79
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEM 125
P + + D + + + I AA+ + LR++L+ + VE+
Sbjct: 80 RALVPGAFGQQLIDLVNSAIDA-RASVGVIGLATAAWAGLGWMSHLRVALSEMWAHPVEL 138
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAI---PLALAYVRKFFPALGNLLLIIWNGRI 182
++ +L ++ V + + P+A A P L I +
Sbjct: 139 GNYVRNKLSDLAAMVGTFVVTMATIALTALGYLRPMATALKWLGIPEFSLLDWIFRAISV 198
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+++ ++ ++ LP + ++ + + + + + + + Y+ T S
Sbjct: 199 VLSVVVSWLLFTWMIARLPRQSGRFVTSMRAGLIAAVGFELFKQVGSIYLRTVL-RSPAG 257
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF Y+ +
Sbjct: 258 ATFGPVLGLMVFAYVTAYLVLF 279
>gi|121592586|ref|YP_984482.1| ribonuclease BN [Acidovorax sp. JS42]
gi|120604666|gb|ABM40406.1| ribonuclease BN [Acidovorax sp. JS42]
Length = 305
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 100/264 (37%), Gaps = 12/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAW 70
+ A++ +++ DG M++ +S +LS+ P ++ + G+ ++ + +I V G
Sbjct: 26 LVRAVQMWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDQAYLESNLIAQVRGVM 85
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYR----VVEM 125
E A+ + + L +++ + GV L+ +L R + E
Sbjct: 86 GERGAEVVRLALASAQEPAEGRLASMAGFVLLLSGATGVFVELQSALERLWAHGQPAPER 145
Query: 126 RSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
++W+ RL YVL L++ + AI + + P LL I N +
Sbjct: 146 KAWWRMASLRLRGLAYVLAIGFLLLVSLVLSTAINVLATWASARLPFGSGTLLQIVNEAV 205
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + K ++ G + + VG L Y+ T + + Y
Sbjct: 206 AFAVAVALFLGLM--RIGSGPKPPTHCLVFGAVVGATLFTVGKQLLALYLST-AAVVSAY 262
Query: 243 AGLASIMTCLVFLYMLGVFFILGA 266
S++ L+++Y + A
Sbjct: 263 GAAGSLVVLLMWIYFSSAVLLFSA 286
>gi|15828673|ref|NP_326033.1| hypothetical protein MYPU_2020 [Mycoplasma pulmonis UAB CTIP]
gi|14089615|emb|CAC13375.1| unknown; predicted coding region [Mycoplasma pulmonis]
Length = 352
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 96/269 (35%), Gaps = 8/269 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ E + + + LLS P I L + +Q V +D +
Sbjct: 80 ELVKRTYEKISSSEFSFIPPSTAFFILLSFIPIISLVLILLSTISDYQKV--FVDEILKK 137
Query: 70 WPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ ++ I+ L+ + + SS+G S++ Y + +
Sbjct: 138 FIPGLSDFISSFQKNKELSSLENTGIWFLVASLIWISSSGYARFVYSISYIYGHKNLGNV 197
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ V+ ++ + + +++ + +++K L + +
Sbjct: 198 ISNKIKGIFIVIAMALYITLALLIYI---PFINFLKKNLDDDSLYLTFFYISATIYVVFF 254
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ G+I F+P + K I PGV + + + V F + + S+Y + Y L +
Sbjct: 255 YYFGMILFFKFVPKFRLKWKHINPGVWISVLPISLFTVSFGF-LASLSSYGS-YGILGTF 312
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ F +L F +G N + Y+
Sbjct: 313 IYISFFTLILTYFMYVGVMANEAYYKTYF 341
>gi|294155749|ref|YP_003560133.1| hypothetical protein MCRO_0512 [Mycoplasma crocodyli MP145]
gi|291600279|gb|ADE19775.1| putative membrane protein [Mycoplasma crocodyli MP145]
Length = 356
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 95/278 (34%), Gaps = 16/278 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+I A F + + + S L+S P I+ +
Sbjct: 77 MINRAYIKFSSREFIFIPAASSFYLLVSFVPVIIMNYLILSLFNFASVQNIFNRYFLDII 136
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVVEMR 126
+ I I + IS + + SS G + S N Y +
Sbjct: 137 LPKMIPGIETVISFLTTELNGTQAIISLIFLAVTCLWVSSAGYGKIIASQNYIYNHKYLG 196
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL---AYVRKFFPALGNLLLIIWNGRIY 183
+ RL VL+ ++ L + + + + + K ++L I N
Sbjct: 197 TNLGNRLKGLIVVLIIAILLSFTVIFTMGLDIMISGYEILNKKVDHNSTIVLFIIN---- 252
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI-SWVVGAVLFTHYIVTFSTYSTMY 242
+ L L++G I + + P+ K SI G + I +W++ ++ + I S ++ Y
Sbjct: 253 -SFLFLYLGFILLFKYSPSFKLTFRSINSGALIASIPTWLLVSIFAS--IAKISDFNK-Y 308
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L M +F+ M F LG +N + + ++
Sbjct: 309 GPLGIFMYLSIFISMFTYFMYLGIIVNEAYFKTFISQR 346
>gi|41407780|ref|NP_960616.1| hypothetical protein MAP1682c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396134|gb|AAS03999.1| hypothetical protein MAP_1682c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 340
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 98/267 (36%), Gaps = 18/267 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+I + + ++ G +A+ I+ AL+S+FP ++ G + G V+
Sbjct: 17 VIVGVVYKYNDDQGGYLAALITYYALVSLFPLLLLLTTGLGVILAGRPDLQAQVLHSTLS 76
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEMRS 127
+P I ++ + I LA A + GV +A++ +++ A+ V + +
Sbjct: 77 EFP-----VIGSQLHHPEGLSGGAAGVIVGLAGALYGGLGVGQAVQNAMDSAWAVPKHK- 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
I L + ++ + + + A LG L + + I A +
Sbjct: 131 --RPNPIRSRLRSLLLLLVLGSAAIAATLLAAAGQATAGLGFLGKAGLALASVAINALIC 188
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG-LA 246
+ + A + PG + + W + Y+ ++ A
Sbjct: 189 LV------LFRLTTARALSYRQVWPGAVAAALVWQLLQWFGAGYVAHVVKRASATNSVFA 242
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
++ L FL++ ++ AE+N ++
Sbjct: 243 LVLGALAFLFLASTVLVVCAEVNVVLV 269
>gi|318040575|ref|ZP_07972531.1| serum resistance locus BrkB-like protein [Synechococcus sp. CB0101]
Length = 312
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 103/281 (36%), Gaps = 25/281 (8%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
V + + + + ED +++ + L S+FP ++ +A + A ++
Sbjct: 8 RSVVRLCWRSYRLWDREDCVDLSAAFAYHTLQSIFPILLIALGVASRVLGSADNVSDQLL 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ P + I + Q++ G + A S+N +L+ +R +
Sbjct: 68 ELADQVLPASVIPVIRSTLNQLI-RQGTGAGLVGAGFLLVSSTNAYLSLQRGADRLWGFR 126
Query: 124 E--------MRS---WYITRLISFGYVLLASVTLV---IMSFVFVAIP-----LALAYVR 164
R + RL + V L +V + + + + P + +++
Sbjct: 127 PCLLPIDHWTRPVWRFIRARLEAIALVTLIGFFVVLDQLTTNLRLLSPGSWRLMLQSWLP 186
Query: 165 KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
+ + + + G +L L+ + LP + S++PG + + +
Sbjct: 187 SWLHLWAPVPMAVDFGLSLLIACSLAFALLAI---LPTRHVPVRSLIPGSMLIGLVLTIF 243
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
V+ +++ + Y + ++ ++++++G+ G
Sbjct: 244 NVVLGRSLLSLGSRFQAYGVIGGVLLLSLWVWLVGLVVYFG 284
>gi|294507267|ref|YP_003571325.1| YihY family protein [Salinibacter ruber M8]
gi|294343595|emb|CBH24373.1| YihY family protein [Salinibacter ruber M8]
Length = 375
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/286 (17%), Positives = 101/286 (35%), Gaps = 25/286 (8%)
Query: 10 DIIYDAIE---HFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDV 65
D++Y A+ E+ + A I+ L+++ P ++ + G L V
Sbjct: 27 DVVYYAVGLYLELSEKHVFLWAQAIAFKVLVTIVPIVILATGVVGRVLQGKDAFTAVTRF 86
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA------ 119
+ P ++ + D + Q+ A + I + + +L I+L A
Sbjct: 87 IRELLPGSQSQQLIDFLTQLQDASAT-IVGIGGIGLFLSA----MSLFITLRIAVSNAFE 141
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLIIW 178
+ RS L V+ ++ + V++P + + F +W
Sbjct: 142 QDWHQERSLLWGYLFDVRMVVQVGGLFLMTVGLSVSLPSFVNEVIIGQFLGSEQWAQWLW 201
Query: 179 NGRIYATMLALFIG-----LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I+ T L L + ++ +P + S L G + + W FT Y
Sbjct: 202 GRAIWITGLLLPLLLTTTMFFQLYYLVPQPSPRKRSALAGALLAAVLWETAKQAFTFYAT 261
Query: 234 T--FSTYSTMYAG-LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ T + I+ + ++Y GV ++GA + AS+ +
Sbjct: 262 YVGYGTGTEALGSTFGLIVAFVFWVYFSGVVLMIGAVV-ASLQEHR 306
>gi|309803296|ref|ZP_07697393.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
gi|308164804|gb|EFO67054.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
Length = 158
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISF 136
+ +L + G ++ + A + S V ++RI++N+ Y V E + ++
Sbjct: 79 LPIVKSLLHQQSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 137 GYVLLASVTLV 147
+LL S+ ++
Sbjct: 139 TLMLLLSIFMI 149
>gi|311277551|ref|YP_003939782.1| ribonuclease [Enterobacter cloacae SCF1]
gi|308746746|gb|ADO46498.1| ribonuclease [Enterobacter cloacae SCF1]
Length = 311
Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/265 (15%), Positives = 89/265 (33%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + D +
Sbjct: 28 LLRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIFDKILMN 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-----RVVE 124
+ + + + L A Y N + LR ++ R +
Sbjct: 88 VSDPTLAATLKSTINTAVQQRTTVGIVGLLIALYSGINWMGNLREAIRAQSRDVWERTPQ 147
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R R L+ + +I++ +I A L ++ + R+
Sbjct: 148 DREKIWVRYFRDFVSLIGLLLALIVTLSITSISGAAQQTIISALYLDSIEWLKPAWRLIG 207
Query: 185 TMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++F + ++ LP + + +++ G I + ++ T + T S
Sbjct: 208 LAISIFANYLLFFWIFWRLPRQRPRKKALIRGTFIAAIGFEAIKMIMTWTLPTLVK-SPS 266
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 267 GAAFGSVLGLMAFFYFFARLTLFCA 291
>gi|257093614|ref|YP_003167255.1| ribonuclease BN [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257046138|gb|ACV35326.1| ribonuclease BN [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 287
Score = 70.6 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/259 (16%), Positives = 98/259 (37%), Gaps = 6/259 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVF-GANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F G +A+ I+ ALLSV P ++ L+ + + + T+ + P
Sbjct: 21 RTLRSFNGNQGLLLAAAIAYYALLSVVPLLILSVVALSHLVDQAELLATLGRYLEWVVPS 80
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMRSWY 129
+ + + + + + +FSS L ++ + E R +
Sbjct: 81 QSRAFLAE--VSKFMEQRAAVGAVLLVTMLFFSSLAFSVLEKAMTVIFAHRAAAERRHFL 138
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ ++ + +VLL V L+ ++ VA+ +F +L + N + A
Sbjct: 139 TSAVLPYCFVLLLGVALLGVTIASVALEAVAQESVRFLGRDWSLRGVAGNLLYLLGLSAE 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L ++ +P K ++ L G + W V + + + S S +Y LA+ +
Sbjct: 199 IGILTAIYRIMPVGKVRLRHALFGGCTATLIWEVIRQVLVWFFSSLSKASLVYGPLATAV 258
Query: 250 TCLVFLYMLGVFFILGAEL 268
+ + + + GA++
Sbjct: 259 VAMFSMEIAATLLLFGAQV 277
>gi|229489464|ref|ZP_04383327.1| putative ribonuclease [Rhodococcus erythropolis SK121]
gi|229323561|gb|EEN89319.1| putative ribonuclease [Rhodococcus erythropolis SK121]
Length = 344
Score = 70.3 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 104/262 (39%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
D + A F E+ G A+ I+ ++L++ P ++ +AGF+ G +++ ++ + +
Sbjct: 22 LDHLVRAAGRFQEQKGDYYAAGITYFSVLALIPIMMVAFAVAGFVLAGHPEYLESIQEQI 81
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EM 125
+ P + I I + + L AAY + +R +L + E
Sbjct: 82 TKSIPGSLGDTINTLIDSAID-SRASVGIFGLLGAAYAGLGWMANVRDALTAMWESKREP 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFV--FVAIPLALAYVRKF-FPALGNLLLIIWNGRI 182
+ + T+L G ++ ++ +V+ + + P+A V+ + + + + +
Sbjct: 141 KGFVRTKLGDAGALVGLALAMVVSLGMSALSSGPVATQIVKWLNLENITGVGVGLRVVSL 200
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++LA + ++V LP + S + + + + + Y+ +
Sbjct: 201 LLSLLATWAVFLWVIARLPREPVTLRSAAQAALIAAVVFEIFKQVGAIYLAAVTNGPAGV 260
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A I+ LVF++ +
Sbjct: 261 A-FGPIIGLLVFVFTASRMLLF 281
>gi|222109390|ref|YP_002551654.1| ribonuclease bn [Acidovorax ebreus TPSY]
gi|221728834|gb|ACM31654.1| ribonuclease BN [Acidovorax ebreus TPSY]
Length = 305
Score = 70.3 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 100/264 (37%), Gaps = 12/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAW 70
+ A++ +++ DG M++ +S +LS+ P ++ + G+ ++ + +I V G
Sbjct: 26 LVRAVQMWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDQAYLESNLIAQVRGVM 85
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYR----VVEM 125
E A+ + + L +++ + GV L+ +L R + E
Sbjct: 86 GERGAEVVRLALASAQEPAEGRLASMAGFVLLLSGATGVFVELQSALERLWAHGQPAPER 145
Query: 126 RSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
++W+ RL YVL L++ + AI + + P LL I N +
Sbjct: 146 KAWWRMASLRLRGLAYVLAIGFLLLVSLVLSTAINVLATWASARLPFGSGTLLQIVNEAV 205
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + K ++ G + + VG L Y+ T + + Y
Sbjct: 206 AFAVAVALFLGLM--RIGSGPKPPTHCLVFGAVVGATLFTVGKQLLALYLST-AAVVSAY 262
Query: 243 AGLASIMTCLVFLYMLGVFFILGA 266
S++ L+++Y + A
Sbjct: 263 GAAGSLVVLLMWIYFSSAVLLFSA 286
>gi|16752852|ref|NP_445122.1| hypothetical protein CP0579 [Chlamydophila pneumoniae AR39]
gi|7189491|gb|AAF38397.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
Length = 430
Score = 70.3 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 98/262 (37%), Gaps = 3/262 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I +I+ + + A +S LL+ P +VF L+ L + + + F
Sbjct: 24 LLQAIIQSIKVLLHNEAXKEACVLSYYGLLTCVPILVFFLRLSQHLFTNLNWKEWLIIKF 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMR 126
+ + I + GL + + ++ + +L LN+ +R
Sbjct: 84 PDYKKPIVAIVEAAYH--ATESNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTSWTP 141
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ F L++ + +I+ ++ I + +L + + ++ +
Sbjct: 142 ISLKRLVSYFVITLVSPMIFIIVCGSWIYITQIMPIQYAKLFSLSHSMTALYFISRFVPY 201
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L++ L + FLP + S L + W+V F V+ YS Y L
Sbjct: 202 LLLYLALFCCYAFLPRVAIQKTSALISTLIIGSVWIVFQKAFFSLQVSIFNYSFTYGALV 261
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ + L+ LY+ + ++ G L
Sbjct: 262 ALPSFLLLLYIYTMIYLFGGAL 283
>gi|237751340|ref|ZP_04581820.1| tRNA-processing ribonuclease BN [Helicobacter bilis ATCC 43879]
gi|229372706|gb|EEO23097.1| tRNA-processing ribonuclease BN [Helicobacter bilis ATCC 43879]
Length = 279
Score = 70.3 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 84/246 (34%), Gaps = 17/246 (6%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVIAKPI 78
+ + A+ +S ++ S+ P + +L + Q ++ ++ P+ +
Sbjct: 32 NDRIFHYAASLSFYSIFSIIPAFLMFFSLFSLFPSFQDQLQILKQSILDNILPDNAHEFA 91
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
IL K + + L + S R + + R ++ + +I +
Sbjct: 92 K--ILDNFLSNGKEMGFVGFLISLISSFIFFRNFDDVAARIFE-AKKRGYFDSFIIYWLL 148
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+ L + L + I + +I + MLA +I +
Sbjct: 149 ITLIPMFLATSIYFNAVIVDIYSDA------------VITKYYSFIPMLATWIAFAMLFR 196
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+ ++ + I W ++F +Y+ YS +Y ++ IM +++Y+
Sbjct: 197 VAANKPLRFFVLILASLLGAIVWYGLKIIFFYYMSYNKFYSNIYGSVSIIMFAFLWIYVS 256
Query: 259 GVFFIL 264
+ +
Sbjct: 257 WLVVLF 262
>gi|254775220|ref|ZP_05216736.1| hypothetical protein MaviaA2_11191 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 340
Score = 70.3 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 97/267 (36%), Gaps = 18/267 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+I + + ++ G +A+ I+ AL+S+FP ++ G + G V+
Sbjct: 17 VIVGVVYKYNDDQGGYLAALITYYALVSLFPLLLLLTTGLGVILAGRPDLQAQVLHSTLS 76
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEMRS 127
+P I ++ + I LA A + GV +A++ +++ + V + +
Sbjct: 77 EFP-----VIGSQLHHPEGLSGGAAGVIVGLAGALYGGLGVGQAVQNAMDSVWAVPKHK- 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
I L + ++ + + + A LG L + + I A +
Sbjct: 131 --RPNPIRSRVRSLLLLLVLGSAAIAATLLAAAGQATAGLGFLGKAGLALTSVAINALIC 188
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG-LA 246
+ + A + PG + + W + Y+ ++ A
Sbjct: 189 LV------LFRLTTARALSYRQVWPGAVAAALVWQLLQWFGAGYVAHVVKRASATNSVFA 242
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
++ L FL++ ++ AE+N ++
Sbjct: 243 LVLGALAFLFLASTVLVVCAEVNVVLV 269
>gi|296395158|ref|YP_003660042.1| ribonuclease BN [Segniliparus rotundus DSM 44985]
gi|296182305|gb|ADG99211.1| ribonuclease BN [Segniliparus rotundus DSM 44985]
Length = 365
Score = 69.9 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 95/259 (36%), Gaps = 8/259 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGA 69
+ A+E + + A+ ++ ++LS+FP I+ G + G + + + + D +
Sbjct: 43 LVRAVERYQDRKADFFAAGVTYYSVLSLFPLIMIGFAILGQVLIQNPEMLDHIKDRITST 102
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE-MRSW 128
+AK + ++++ + T+ + + A+R SL + ++ E ++W
Sbjct: 103 AQGGLAKQL-NQLIDAAIASRGTVGTVGLGLGLWSGLGWIAAIRESLTQLWQQEEDDKNW 161
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVA---IPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ T+ +L + LV++ + L+ A R ++
Sbjct: 162 FATKFSDLFALLSFGLALVVVFGLITLSKSSWLSKAIGRVGLGDWSGAQSVVTIASTVLA 221
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
LA ++ FV LP + + + + + L ++ T
Sbjct: 222 TLAAWVLFSFVISRLPRKAVALRDAFEAGLIGAVLFEIFLEL-AWLLLKGVTNGPAGKTF 280
Query: 246 ASIMTCLVFLYMLGVFFIL 264
I+ +VFL+ +
Sbjct: 281 GPILGFMVFLFFTARILLF 299
>gi|226305498|ref|YP_002765458.1| hypothetical protein RER_20110 [Rhodococcus erythropolis PR4]
gi|226184615|dbj|BAH32719.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 349
Score = 69.9 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 105/262 (40%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
D + A F E+ G A+ I+ ++L++ P ++ +AGF+ G +++ ++ + +
Sbjct: 27 LDHLVRAAGRFQEQKGDYYAAGITYFSVLALIPIMMVAFAVAGFVLAGHPEYLESIQEQI 86
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EM 125
+ P + I I + + L AAY + +R +L + E
Sbjct: 87 TKSIPGSLGDTINTLIDSAID-SRASVGIFGLLGAAYAGLGWMANVRDALTAMWESKREP 145
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFV--FVAIPLALAYVRKF-FPALGNLLLIIWNGRI 182
+ + T+L G ++ ++ +V+ + + P+A V+ + + + + +
Sbjct: 146 KGFVRTKLGDAGALIGLALAMVVSLGMSALSSGPVATQIVKWLNLENITGVGVGLRVVSL 205
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++LA + ++V LP + S + + + + + Y+ ++
Sbjct: 206 LLSLLATWAVFLWVIARLPREPVTLRSAAQAALIAAVVFEIFKQVGAIYLAAVTSGPAGV 265
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A I+ LVF++ +
Sbjct: 266 A-FGPIIGLLVFVFTASRMLLF 286
>gi|330446434|ref|ZP_08310086.1| putative membrane conserved inner membrane protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328490625|dbj|GAA04583.1| putative membrane conserved inner membrane protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 305
Score = 69.9 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 92/277 (33%), Gaps = 11/277 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D A + F + G + I+ + LS+ P ++ AGF+ + ++ID +
Sbjct: 22 DHFIRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFILASNASLLNSIIDKIV 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMR 126
+ + + + A Y + + LR ++ + V E +
Sbjct: 82 AGVTDPSLATTLKNTVNIAISQRTTVGLSGLAIALYSGVSWMGNLREAIRAQTRDVWERK 141
Query: 127 S-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWN 179
+ + L F + L+ + A A + L ++
Sbjct: 142 PEDKDHFLLQYLKDFVGLTGLVAALIFTVVLTSVAGSAQATIVHALGLEDITWLRPVLTA 201
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ A ++ +++ LP + +++ G + + + T + ++ S
Sbjct: 202 TALTISICANYLMFLWIFWMLPKRRFNRWALMKGTLLAAVGFEAIKFAMTFMLPKLAS-S 260
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A SI+ + F Y + A A+ +
Sbjct: 261 PSGAAFGSIIGLMAFFYFFARLTLFCAAWIATANEHR 297
>gi|6900344|emb|CAB71957.1| hypothetical protein [Neisseria meningitidis]
Length = 316
Score = 69.9 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 7/161 (4%)
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
A L I ++ S + + + NR +RV R W + L+ + L +
Sbjct: 3 EQANRLTAIGSVMLVVTSRMVIRTIDNTFNRIWRVNSQRPWMMQFLV-YWASLTFGPLSL 61
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
+ F+ + A + P L R AT+ + + L ++ F+P
Sbjct: 62 GVGISFMVGSVQDAALASGAPQWSGAL------RTAATLTFMTLLLWGLYRFVPNRFVPA 115
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
G + T LFT Y+ F Y ++Y A++
Sbjct: 116 RQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFAAV 156
>gi|84498025|ref|ZP_00996822.1| membrane protein ribonuclease BN-like family protein [Janibacter
sp. HTCC2649]
gi|84381525|gb|EAP97408.1| membrane protein ribonuclease BN-like family protein [Janibacter
sp. HTCC2649]
Length = 370
Score = 69.9 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 111/266 (41%), Gaps = 10/266 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
++ A + + + G +A ++ A S+FP + + G L G Q++ + D +
Sbjct: 16 LWGAWKRYGDARGNLLAGGVTYFAFFSIFPAVALAFTVFGVLLQGNPQWLDEIKDYLNQT 75
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTIS---ALAAAYFSSNG-VEALRISLNRAYRVV-E 124
P I T+ ++ L +P+ T++ LA F+ G + ALR + + V +
Sbjct: 76 LPGFIQDGGTEGLIP-LTIPSGDTLTVTGLIGLAGLLFAGLGWLGALRDGIRTIFGVEGQ 134
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ T+L G +++ + +V+ + V A ++V + LG ++
Sbjct: 135 PGNFVTTKLRDLGVLVILGMAIVVSAAVTGIAGAATSWVAEAI-GLGGQAWLLSVIAFVV 193
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + ++ + L ++ G + + + VL I ++ + ++A
Sbjct: 194 GAVLDGLVVLVMLRLLSGVDVPRRGLIGGAVIGGVGLTLLKVLGATVIAGTTS-NPLFAS 252
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
+A ++ L +L + +L A +A
Sbjct: 253 IALVVGLLAWLNFMSRIVLLAAAWSA 278
>gi|296125224|ref|YP_003632476.1| ribonuclease BN [Brachyspira murdochii DSM 12563]
gi|296017040|gb|ADG70277.1| ribonuclease BN [Brachyspira murdochii DSM 12563]
Length = 583
Score = 69.9 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 95/234 (40%), Gaps = 16/234 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++++ + +I AI F ++D A+ ++ LS P ++ G + +Q +
Sbjct: 33 IQKFLVNTYRVITFAITDFFKDDCTIRAAALTYLVTLSFIPALIVGLFILRIFNIYQNIF 92
Query: 61 TVI-DVVFGAWPEVIAKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNR 118
VI D + P +P+ +IL + I ++ ++ + +++ SL +
Sbjct: 93 LVIFDWMEKNAP--FYEPMVRQILNIADNTNLASFGIIGIISTIVSTALILHSIQKSLIK 150
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV S I R+++ LL + ++I + Y L L+ I+
Sbjct: 151 IWRVKITTS--IPRVVANYIALLFLIPILIGISF-----TLITYTSINLHNLPALIKILL 203
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ +++ I ++F ++ +P K + I I+ + LF+ Y
Sbjct: 204 S--WVTPIISTSILILFSYVLVPQTKVNWSNAAISSILVAIAII---TLFSVYF 252
>gi|183219700|ref|YP_001837696.1| hypothetical protein LEPBI_I0276 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909835|ref|YP_001961390.1| ribonuclease_BN [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167774511|gb|ABZ92812.1| Ribonuclease_BN [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167778122|gb|ABZ96420.1| Hypothetical protein; putative membrane protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 278
Score = 69.9 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 110/274 (40%), Gaps = 10/274 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I D +AS +S + LL++FP +V L G L + + + D + P
Sbjct: 4 IRRFFSEVYLYDVHGLASELSFTFLLTLFPLLVVFVTLLGLLQDPRTINLMTDQIGKFLP 63
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I +PI + + V + + IS + S + +L R + +
Sbjct: 64 APIFQPIDKSVENLTKVKSYNVIAISIAISFISSLTIFGTISKALRFISRDETQVGFIAS 123
Query: 132 RLISFGYVLLASVTLVI---MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ I+F ++++ V LV +++ V+I L +F + L + + ++
Sbjct: 124 QWINFRLLVISLVLLVFYFYLTYGIVSIERVLYQSFRFAFFRNHPYLSVSLIILPYSIGL 183
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS---TYSTMYAGL 245
F + ++ AK+ + LPG IF + + + F Y+ + YS Y +
Sbjct: 184 ----FTFYYAYITKAKTTLKENLPGAIFASLLVLGMSFGFQFYLKMKNVGVNYSLAYDLI 239
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++ +++ Y+ FFI G N + +K
Sbjct: 240 SKMVVLMLYTYINSTFFIWGFLWNQVLADDRGKK 273
>gi|114797118|ref|YP_759209.1| hypothetical protein HNE_0479 [Hyphomonas neptunium ATCC 15444]
gi|114737292|gb|ABI75417.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
Length = 291
Score = 69.9 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 98/273 (35%), Gaps = 6/273 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
A+ V D + I+ AL S+FP I L F + + V + +
Sbjct: 15 RAVRRLVRPDVRIVTGGIAFYALFSIFPLIYMTLTLLTFFLPPELAHQLAKPVTNFFSQS 74
Query: 74 IAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ +E+ + + GL ++A+ + +++G +AL + + +
Sbjct: 75 VEPLTFEEVDAIQKMTPAGLSVRAFLAAILVLFTATSGAKALITGIRMIAGTADRTRFAR 134
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ S + + ++ + + +A+ + + I + + +A F
Sbjct: 135 FQGTSLLLTATLILVVWLLGALQLIATVAVQEAGGLAMRFASEIATIVDSLWISKGIASF 194
Query: 191 IGLIFVHL--FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ L + ++ G ++++ +F Y+ +S T+Y +AS+
Sbjct: 195 GVFYLILLMSLRGHVRRGTKALAAGAGAAAVAFLGVTFVFQLYL-QYSVMGTIYGAIASL 253
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ ++L +LGA L + +P
Sbjct: 254 IFGFIWLSASVSSLLLGAALATEWAHAWGEDEP 286
>gi|182436491|ref|YP_001824210.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178465007|dbj|BAG19527.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 340
Score = 69.9 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 96/264 (36%), Gaps = 9/264 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ + E +A+ I+ + L++FP I GA +A L + + V T+ D + P
Sbjct: 33 VWRSYERLERVHWARLAAAITFISFLALFPLIAVGAAVAAALLSDEQVDTIKDKLADQVP 92
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SWY 129
+ + D + + GL ++ + V +LR L + + E++ +
Sbjct: 93 GISDQLGVDGL--IANAGTVGL--VAGALLLFTGVGWVGSLRECLRAVWELDEVQEANPV 148
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ ++ ++ + V A+ + N + + +
Sbjct: 149 VAKVKDAVLLVGLGGAGLATLAVSTVGSTAVGWTADQIGIPENGAGGVLLRVAALAVAVV 208
Query: 190 --FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
F+ L+++ LP + ++ + + + + +L Y+ + S MY
Sbjct: 209 ADFLLLLYLLTLLPGVEPPRRRLMVAALLGAVGFELLKLLLGSYMREVAGKS-MYGAFGV 267
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 268 PIALLLWINFTAKLLLFCAAWTAT 291
>gi|331699049|ref|YP_004335288.1| ribonuclease [Pseudonocardia dioxanivorans CB1190]
gi|326953738|gb|AEA27435.1| ribonuclease [Pseudonocardia dioxanivorans CB1190]
Length = 355
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 101/269 (37%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
+R + + ++ A + + G A+ I+ ++L++ P ++ +AGF +
Sbjct: 27 LRSRYAWLDHVV-RAGARYTDRHGDHYAAAITYFSVLALVPLLMIAFAIAGFALRAQPEL 85
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + + A P + + D I + + A + + + A Y + LR +L+
Sbjct: 86 LEQLRVAITTAVPGGLGDTLNDIIQKSID-QAGAVGVLGLIGALYSGIGWMSNLREALSE 144
Query: 119 AYRV-VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL--GNLLL 175
+ E + + +L + LV+ V + G L
Sbjct: 145 QWAQPPETPNAVKKLIFDLLALLGLGLALVVSLAVTAVGTGVGRLLLDLVGLGDQGWALF 204
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ + ++A ++ ++V LP A S L + + + + + T Y+
Sbjct: 205 LLGVVGVLLGLVANWLVFVWVIARLPRAPVATRSALKAAVLGAVGFEILKQVMTIYLRAV 264
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ A SI+ L+F++ + F +
Sbjct: 265 TNSPAG-AAFGSIIGLLIFVFFVSRFILF 292
>gi|154174119|ref|YP_001408500.1| ribonuclease BN [Campylobacter curvus 525.92]
gi|112802713|gb|EAU00057.1| ribonuclease BN [Campylobacter curvus 525.92]
Length = 274
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 95/273 (34%), Gaps = 12/273 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPT 61
+ I A +++ AS +S +LS+ P ++ +L + + +
Sbjct: 7 DAIKQTLKIWLSAAVKIKDKELLHYASSLSFHTMLSIIPVLLISLSLFTQMPSFSVYYAK 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + +F + I++ I L + L + A + S +NR
Sbjct: 67 IKEFIFAQLLPSNQEAISNYIETFLQNSSS-LGILGLGAIIFTSIMFFADYEYVINRIMH 125
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R ++ + + + LA + L + ++ L + N
Sbjct: 126 TS-GRKFWNSLSAYWTLITLAPLGLGLSFYLSNLFQDMLN---------ASTYTKWINFL 175
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L ++ +L + ++L + W +G +F Y V TY ++
Sbjct: 176 SIFPYLIIWAIFCVTYLISINRSLALKNVLFSSFVASLIWYLGKSIFVFYAVNNKTYLSI 235
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y + ++ V++Y+ + F+ G +L A +
Sbjct: 236 YGSFSVVLLFFVWIYVSWIIFLYGVKLCAYLEK 268
>gi|15835723|ref|NP_300247.1| hypothetical protein CPj0188 [Chlamydophila pneumoniae J138]
gi|8978561|dbj|BAA98398.1| CT132 hypothetical protein [Chlamydophila pneumoniae J138]
Length = 430
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 98/262 (37%), Gaps = 3/262 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I +I+ + + A +S LL+ P +VF L+ L + + + F
Sbjct: 24 LLQAIIQSIKVLLHNEASKEACVLSYYGLLTCVPILVFFLRLSQHLFTNLNWKEWLIIKF 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMR 126
+ + I + GL + + ++ + +L LN+ +R
Sbjct: 84 PDYKKPIVAIVEAAYH--ATESNIGLVLVGSFYVFCWAGILMLLSLEDGLNKIFRDSWTP 141
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ F L++ + +I+ ++ I + +L + + ++ +
Sbjct: 142 ISLKRLVSYFVITLVSPMIFIIVCGSWIYITQIMPIQYAKLFSLSHSMTALYFISRFVPY 201
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L++ L + FLP + S L + W+V F V+ YS Y L
Sbjct: 202 LLLYLALFCCYAFLPRVAIQKTSALISTLIIGSVWIVFQKAFFSLQVSIFNYSFTYGALV 261
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ + L+ LY+ + ++ G L
Sbjct: 262 ALPSFLLLLYIYTMIYLFGGAL 283
>gi|313678180|ref|YP_004055920.1| membrane protein [Mycoplasma bovis PG45]
gi|312950400|gb|ADR24995.1| putative membrane protein [Mycoplasma bovis PG45]
Length = 344
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 104/279 (37%), Gaps = 7/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R+ + +++ + F D + + +L+S P I+ + +
Sbjct: 60 LRKNKNKLGELVGRVYKRFTSRDFVFIPVSFAFYSLVSFIPIILSVSVALSLIPGEFSTL 119
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ P + + Q L LA+ + SS+G S+N Y
Sbjct: 120 FNNEILKRIIPG--LDSFINSVPQTWNAKTFVLVITLFLASLFISSSGFGKFTYSINYIY 177
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ +++ RL F V+ ++ + I + ++++I + I+++
Sbjct: 178 KHETTGNYFFNRLKGFFIVIGIALFIFISALIYLSIYKLFGVHKASELDKNIYFYIVFSL 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ML L++GL + P S+LPGV+ + +V +F + Y
Sbjct: 238 YL---MLNLYVGLSVLFKISPGFIVPWSSLLPGVLIASLPTMVFITIFGYLTSLIDYYK- 293
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ M + + ++ F LG NA+ ++ +
Sbjct: 294 -FGIFGIFMYIALLVSIMSYFMYLGIITNAAFYKTFYSR 331
>gi|225163949|ref|ZP_03726239.1| ribonuclease BN [Opitutaceae bacterium TAV2]
gi|224801442|gb|EEG19748.1| ribonuclease BN [Opitutaceae bacterium TAV2]
Length = 541
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 75/209 (35%), Gaps = 6/209 (2%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ K I I + + L + N + V RSW +
Sbjct: 182 PELVKLIDGFID---GSKSSTAGVVGVLTLIVIVVQLFTTVENVFNEIWGVRRGRSWVM- 237
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGRIY-ATMLAL 189
R++ + VL L + ++ ++ + P +G + + + +++ L
Sbjct: 238 RVVYYWTVLTLGAVLFFAAVTALSAGAFFSFFAQNMPFGIGTTIAAVLRWALPSLSIVLL 297
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I L + F+P + +S L G + + L Y+ + + L +
Sbjct: 298 MIILTLFYKFIPNTRVLWLSALVGAVVVAGLVMANNYLAFLYLSKVIQQRSFFGSLGILP 357
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ LY+ +F +LG +++ ++ ++R
Sbjct: 358 ILMFGLYIFWLFILLGGQVSYAVQNVHFR 386
>gi|152995747|ref|YP_001340582.1| putative ribonuclease BN [Marinomonas sp. MWYL1]
gi|150836671|gb|ABR70647.1| putative ribonuclease BN [Marinomonas sp. MWYL1]
Length = 313
Score = 69.5 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 98/261 (37%), Gaps = 9/261 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+F + Y I F + A+ ++LS+LL+ P I + F A + + T +
Sbjct: 35 FFLVFKRYGYLTITRFNHSNLSQKAAQLTLSSLLAAVPIITIIVGILSFTPALEAMQTQL 94
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ + + +++ + +K L +A + + + S+ + +
Sbjct: 95 FQLIEQHLAPGSSDIVMPYLIK-FSAQSKNLPAAGLVALVLTALLLLNSFESSVQSIWEI 153
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R RL+++ +L ++ S + + L + I N
Sbjct: 154 RKARK-IRERLLTYWAILTLG-PIIFASSLSLYGTLISIQIHG-----TQTNAWIDNLLE 206
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T+ F+ L+ ++ P A+ + + I + +F+ + FS+Y +Y
Sbjct: 207 LGTITLYFLMLLTLNFLTPNAEVSLKWASISALAGSIGLFILNTIFSSFAQFFSSYQVVY 266
Query: 243 AGLASIMTCLVFLYMLGVFFI 263
A+I L++L + +
Sbjct: 267 GAFAAIPIFLIWLQSSWLIVL 287
>gi|269102248|ref|ZP_06154945.1| putative membrane protein [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268162146|gb|EEZ40642.1| putative membrane protein [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 347
Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 88/268 (32%), Gaps = 21/268 (7%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A + F + G + I+ + LS+ P ++ AGF+ + +ID +
Sbjct: 53 RAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFILASNADLLTDIIDKIVNGVT 112
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + A Y + + LR ++ + R +
Sbjct: 113 DPSLAQTLKNTVNTAVNQRTTVGLSGLAIALYSGISWMGNLREAVR-----AQTRDIWER 167
Query: 132 R-------LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW------ 178
+ L+ +G +A LV VA+ + L + W
Sbjct: 168 KPEDKDHILLQYGKDFIALTGLVAALIFTVALTSIAGSAQASIVNALGLNDVTWLRPVLT 227
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ A ++ ++++ LP K + +++ G + I + T + +
Sbjct: 228 TIALTISISANYLMFLWIYWMLPKKKLERKALILGTLMAAIGFEGIKFAMTFMLPKLAQ- 286
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGA 266
S A SI+ + F Y + A
Sbjct: 287 SPSGAAFGSIIGLMAFFYFFARLTLFCA 314
>gi|328884565|emb|CCA57804.1| putative membrane protein [Streptomyces venezuelae ATCC 10712]
Length = 336
Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 91/262 (34%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ I+ + L++FP I A + L + + + + + + P
Sbjct: 37 WRSYETLDAAHWTRLAAAITFLSFLALFPLITVAAAIGAALLSEEQLDKIEEKIGDQVPG 96
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EMRSWYI 130
+ + ++ A + ++ + + A+R L + + E +
Sbjct: 97 ISDQLDIGGLV----ANAGTVGLVAGAVLLVTGISWIGAMRDCLRAVWGLDDIEGNPILL 152
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIWNGRIYATMLAL 189
+ V L V L ++ ++ + P G + + ++A
Sbjct: 153 KGKDALVLVGLGGVALASLAASWLGSTTVGWTADRLGIPGDGAGGFFLQVAAVLVAVVAD 212
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP ++ + + + + +L Y+ + S MY +
Sbjct: 213 FLILLYVLTLLPGVHPPRRRLVVAALMGAVGFELLKLLLGGYMRGVAAKS-MYGAFGVPV 271
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A+
Sbjct: 272 ALLLWINFTAKLLLYCAAWTAT 293
>gi|332671377|ref|YP_004454385.1| ribonuclease BN [Cellulomonas fimi ATCC 484]
gi|332340415|gb|AEE46998.1| ribonuclease BN [Cellulomonas fimi ATCC 484]
Length = 330
Score = 69.1 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 97/263 (36%), Gaps = 9/263 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFG-ANLAGFLGAHQFV-PTVIDVVFGAWP 71
A F G ++ I+ +AL SVF + G LG + V+D + P
Sbjct: 54 RANARFGAAGGALLSGGIAYAALFSVFAGLTIGYTAFMAVLGDDAALRQQVLDAIDQTLP 113
Query: 72 EVI----AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+I + D VL+ ++ + + + ALR + + V +
Sbjct: 114 GLIDTGENDGLVDPATLVLSPALTVAGVVALVVLVLSAISATAALRTGVRAMFGRVSGDN 173
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+++L G + ++ +++ + + A A ++ ++ +
Sbjct: 174 AVLSKLREVGGFVGIALAVLLSAVLTTAATAAARWLTGLLGWTAGPGTVVAALVSFVVDA 233
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ ++ FL + + G + +L T + + +T + + A A
Sbjct: 234 GMFLLVV---WFLAGQRPAWRDLRGGALIAATGMGAVRLLGTSVVASSATRNPLLASFAV 290
Query: 248 IMTCLVFLYMLGVFFILGAELNA 270
++T LV++ +L +L A A
Sbjct: 291 VVTLLVWVNLLARIVLLAAAWTA 313
>gi|313141540|ref|ZP_07803733.1| tRNA-processing ribonuclease BN [Helicobacter canadensis MIT
98-5491]
gi|313130571|gb|EFR48188.1| tRNA-processing ribonuclease BN [Helicobacter canadensis MIT
98-5491]
Length = 278
Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 94/253 (37%), Gaps = 11/253 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPE 72
+ F++ D A+ +S + ++ P ++ +L L ++ + ++V +
Sbjct: 16 KILYGFLKGDLLYFAASLSFYTIFALLPMLLIVFSLVAALPDFKDYLESFKNLVITNFLP 75
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ D + LA AK L + L A S + + + + R ++ +
Sbjct: 76 TYSDVFLDYMDSFLANSAK-LGGMGLLYAFVTSILFFKNYQFIAGKIFHTK-PRGFWDSL 133
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + + L V ++ ++ A + LG ++W R+ ++ I
Sbjct: 134 AVYWTCMTLFPVGILFSIYLS-------AKAYAYLDVLGYKDFMLWLFRLSPYLITWAIF 186
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
IF + + L + T + W F +Y+ Y T+Y L+ ++
Sbjct: 187 FIF-FKISANTQIDFKNTLISSLITALLWSFCKWGFVYYVFYNKAYLTLYGSLSILLFLF 245
Query: 253 VFLYMLGVFFILG 265
+++Y+ + G
Sbjct: 246 IWVYLSWAILLFG 258
>gi|326334108|ref|ZP_08200335.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
gi|325948084|gb|EGD40197.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
Length = 307
Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/270 (11%), Positives = 86/270 (31%), Gaps = 6/270 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH--QF 58
+R+ F + ++ EH+ E A I+ LS FP + G +
Sbjct: 14 LRDRFPALDRVV-RTQEHYGEVGASQQAGAITYFGFLSTFPILALAFFAVGQIAKVYGGA 72
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+++ + P ++ + + A + + A Y ++ LR +L
Sbjct: 73 ESDLVEAIDQVLPGLVGDGAGQLKIADIERAAGAVGIVGAFGLLYAGLGFIDGLRKALEA 132
Query: 119 AYRV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ V E + + ++ ++L + +++ I V + +
Sbjct: 133 VFLVPEEEQPGFLMAKVRDLAALILLGLIMLVAVAFTGLIRTFSVNVLDWIGLDEGFGWL 192
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I + + A + + P + G + I + V + ++ +
Sbjct: 193 IVLLTLVLGLAANTVLFFAMFHLAPQKDIPKRPLWAGAVLGAIGFEVLKQA-STLLLKAT 251
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ + +V+++ + + A
Sbjct: 252 QGQPAFQAFGIALILVVWIHYTSMVILYAA 281
>gi|89073408|ref|ZP_01159932.1| putative membrane protein [Photobacterium sp. SKA34]
gi|89050895|gb|EAR56369.1| putative membrane protein [Photobacterium sp. SKA34]
Length = 320
Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 95/278 (34%), Gaps = 13/278 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D + A + F + G + I+ + LS+ P ++ AGF+ + ++ID +
Sbjct: 36 DHLIRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFILASNASLLNSIIDKIV 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMR 126
+ + + + A Y + + LR ++ + V E +
Sbjct: 96 AGVTDPNLATTLKNTVNIAISQRTTVGLSGLAIALYSGISWMGNLREAIRAQTRDVWERK 155
Query: 127 S-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIW 178
+ + + + L+ + A A + LGN+ ++
Sbjct: 156 PEDKDHFLLQYVKDLVALTGLVGALIFTVVLTSVAGSAQATIVNAL-GLGNITWLRPVLT 214
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ A ++ +++ LP + +++ G + I + T + ++
Sbjct: 215 ATALTISICANYLMFLWIFWMLPKRRFNRWALMKGTLLAAIGFEAIKFAMTFMLPKLAS- 273
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
S A SI+ + F Y + A A+ +
Sbjct: 274 SPSGAAFGSIIGLMAFFYFFARLTLFCAAWIATANEHR 311
>gi|288921677|ref|ZP_06415946.1| ribonuclease BN [Frankia sp. EUN1f]
gi|288346946|gb|EFC81254.1| ribonuclease BN [Frankia sp. EUN1f]
Length = 299
Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 91/256 (35%), Gaps = 11/256 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGAWP 71
A + + + G A+ + A LS FP + ++ GF+ + + P
Sbjct: 27 RAYQRYTGDGGDRCAASTTYFAFLSFFPIMALAFSVLGFVVDAYPDAQAKFTEQINDYLP 86
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYI 130
+ + I + LA + V ALR S+ + E ++ +
Sbjct: 87 GLADRLDVATIGRAKVGAGLIGLAGLLLAGLAW----VSALRDSIRIIWHQSLEAGNFVM 142
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL--LLIIWNGRIYATMLA 188
R+ + +TL + V A ++ GN + + ++
Sbjct: 143 RRIRDVAILAGLGLTLAVSLVVTSLATSATDAFLRWIGLAGNTAAAWVTGLLALGVALVI 202
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+F+ +LP ++ +L + + + +L ++V +T + +Y A I
Sbjct: 203 DMAVFVFIFRYLPERTNRDR-VLRAALLGAVGVELLKIL-GTWLVGQTTSNPVYGTFAVI 260
Query: 249 MTCLVFLYMLGVFFIL 264
+ L+++ ++ + +
Sbjct: 261 VGLLIWINIMMRWMLF 276
>gi|118465303|ref|YP_881928.1| hypothetical protein MAV_2739 [Mycobacterium avium 104]
gi|118166590|gb|ABK67487.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 324
Score = 69.1 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 97/267 (36%), Gaps = 18/267 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+I + + ++ G +A+ I+ AL+S+FP ++ G + G V+
Sbjct: 1 MIVGVVYKYNDDQGGYLAALITYYALVSLFPLLLLLTTGLGVILAGRPDLQAQVLHSTLS 60
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEMRS 127
+P I ++ + I LA A + GV +A++ +++ + V + +
Sbjct: 61 EFP-----VIGSQLHHPEGLSGGAAGVIVGLAGALYGGLGVGQAVQNAMDSVWAVPKHK- 114
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
I L + ++ + + + A LG L + + I A +
Sbjct: 115 --RPNPIRSRVRSLLLLLVLGSAAIAATLLAAAGQATAGLGFLGKAGLALTSVAINALIC 172
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG-LA 246
+ + A + PG + + W + Y+ ++ A
Sbjct: 173 LV------LFRLTTARALSYRQVWPGAVAAALVWQLLQWFGAGYVAHVVKRASATNSVFA 226
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
++ L FL++ ++ AE+N ++
Sbjct: 227 LVLGALAFLFLASTVLVVCAEVNVVLV 253
>gi|317509129|ref|ZP_07966755.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974]
gi|316252565|gb|EFV12009.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974]
Length = 328
Score = 69.1 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 89/259 (34%), Gaps = 9/259 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGAW 70
A+E + + A+ ++ ++LS+FP I+ G + G + + + + + +
Sbjct: 1 MRAVERYQDRKADFFAAGVTYYSVLSLFPVIMVGFAILGQVLIQNPELLEHIKERITSMA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSW 128
+AK + ++++ + T+ + + ALR SL + ++ +W
Sbjct: 61 QGGLAKQL-NQLIDSAIASRTTVGTVGLALGLWSGLGWMAALRESLTQLWQQDPDSEANW 119
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ T+ + + LV++ + + LG+ I +T+LA
Sbjct: 120 FKTKFSDLLAMASFGLALVVVFGLITLSKSSWLVKALVKVGLGDWSGGQGFLTIVSTVLA 179
Query: 189 LFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ LP + + I + + L ++ T
Sbjct: 180 TIAAWLLFTFVIARLPRKSVALADASQAGLLGAILFQIFLEL-AWLLLKGVTNGPAGKTF 238
Query: 246 ASIMTCLVFLYMLGVFFIL 264
I+ +VF + +
Sbjct: 239 GPILGLMVFFFFTVRIVLF 257
>gi|157165667|ref|YP_001466776.1| putative molybdopterin biosynthesis protein [Campylobacter concisus
13826]
gi|112800135|gb|EAT97479.1| ribonuclease BN [Campylobacter concisus 13826]
Length = 273
Score = 68.7 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 103/260 (39%), Gaps = 11/260 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPE 72
+ + +++ + A+ +S +LS+ P ++ ++ L + + + D VF A
Sbjct: 16 NLLAALKDKELFHYAASLSFHTILSIIPILLISFSIFTKLPSFEDYYAKIQDFVFSALLP 75
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ I++ + L + L + +A + S+ +++ R + R ++
Sbjct: 76 SNQEIISNYLQNFLQN-SGNLGIVGFVAMIFTSAMFFSDYEYVVSKVTRASKARGFWSAL 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + LA + L ++ + L N++ N L +++
Sbjct: 135 SSYWTLITLAPLGLAGSFYLSSLVQEMLN---------SNVITSSINFLSIVPYLIIWVI 185
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+L + K S L + W +G F +Y++ TY ++Y ++++
Sbjct: 186 FCVTYLISVNDEIKFKSALFSSFAASLVWYLGKSAFVYYVLYNKTYLSVYGSFSAVLFFF 245
Query: 253 VFLYMLGVFFILGAELNASM 272
V++Y+ + F+ G + A +
Sbjct: 246 VWIYISWIIFLYGLKFCAYL 265
>gi|224417997|ref|ZP_03656003.1| putative ribonuclease BN [Helicobacter canadensis MIT 98-5491]
gi|253827332|ref|ZP_04870217.1| tRNA-processing ribonuclease BN [Helicobacter canadensis MIT
98-5491]
gi|253510738|gb|EES89397.1| tRNA-processing ribonuclease BN [Helicobacter canadensis MIT
98-5491]
Length = 280
Score = 68.7 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 94/253 (37%), Gaps = 11/253 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPE 72
+ F++ D A+ +S + ++ P ++ +L L ++ + ++V +
Sbjct: 18 KILYGFLKGDLLYFAASLSFYTIFALLPMLLIVFSLVAALPDFKDYLESFKNLVITNFLP 77
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ D + LA AK L + L A S + + + + R ++ +
Sbjct: 78 TYSDVFLDYMDSFLANSAK-LGGMGLLYAFVTSILFFKNYQFIAGKIFHTK-PRGFWDSL 135
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + + L V ++ ++ A + LG ++W R+ ++ I
Sbjct: 136 AVYWTCMTLFPVGILFSIYLS-------AKAYAYLDVLGYKDFMLWLFRLSPYLITWAIF 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
IF + + L + T + W F +Y+ Y T+Y L+ ++
Sbjct: 189 FIF-FKISANTQIDFKNTLISSLITALLWSFCKWGFVYYVFYNKAYLTLYGSLSILLFLF 247
Query: 253 VFLYMLGVFFILG 265
+++Y+ + G
Sbjct: 248 IWVYLSWAILLFG 260
>gi|149275944|ref|ZP_01882089.1| probable ribonuclease [Pedobacter sp. BAL39]
gi|149233372|gb|EDM38746.1| probable ribonuclease [Pedobacter sp. BAL39]
Length = 306
Score = 68.7 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 96/270 (35%), Gaps = 10/270 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT- 61
+ F A + F D +A + A ++ P ++ L G+ + +
Sbjct: 7 SKIKLFFIRFGAAFKLFQHNDPLRLAGATAFFANFAIPPILIILIRLFGYFVDRKLLANR 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAY 120
+ + + + I ++ + AV + T +S + + ++ ++ S+++ +
Sbjct: 67 LFERLADLLDDSSTSQIRQTLMNIRAVDHQWYATLLSFVFFIFVATTLFNVIKNSMDQIW 126
Query: 121 RVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + R SF +LLA + + Y+ P G L
Sbjct: 127 SIAKKPHQGFFFTLKLRARSFIIILLAGILFFVGLLTDSVQAFIGIYLNNAAPTFGKFFL 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I N ++ + I + FL + S + G IFT I + +G + +
Sbjct: 187 SILNQLLFVA--IVTIWFTILFRFLTNGRPTWASAIHGGIFTGILFTIGKFILRIMLPM- 243
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILG 265
S +Y SI+ ++F++ F G
Sbjct: 244 SGIGNIYGTSGSIVLIMLFVFYSSFIFYFG 273
>gi|42525669|ref|NP_970767.1| ribonuclease BN-like family protein [Treponema denticola ATCC
35405]
gi|41815680|gb|AAS10648.1| ribonuclease BN-like family protein [Treponema denticola ATCC
35405]
Length = 435
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 88/256 (34%), Gaps = 3/256 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ IY I FV D A+ + + L+S P + + + Q
Sbjct: 23 KKGLYDFNQKIYITIVSFVNNDLLTTAAAGAYNFLMSALPIFILTLTILLRV-LKQSPQQ 81
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA-AYFSSNGVEALRISLNRAY 120
+ + + + +L V + F L + + ++ S+ + Y
Sbjct: 82 IKEALRALSIFQNTVNLDRFFHFLLNVNSFSFFEFIVLIFVLWMARRFFATIQHSIRKVY 141
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + T LI ++ + LV + + NL ++ N
Sbjct: 142 RKKIKITPLKTSLIVILGEIIVVILLVFLFIFLITGSAVFRSDFAQPVFSPNLFSLLRNL 201
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ + + + ++ ++P K + L +S+ + F+ + T ++
Sbjct: 202 FRFIPVIFMQLFVCLIYYWMPPIKPSFKTALLSSAACTLSYYFVKIFFSFFRST-VKFTF 260
Query: 241 MYAGLASIMTCLVFLY 256
+Y +++ L+ ++
Sbjct: 261 VYGLFTNVILVLIQVW 276
>gi|187919992|ref|YP_001889023.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
gi|187718430|gb|ACD19653.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
Length = 300
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 4/258 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
++ F G +A ++ ALLS+ P ++ + + +
Sbjct: 22 QTLKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRFVPQHVLLAALAHLLQWLVPG 81
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS---WYI 130
+ + E+ L+ A + + L +FSS L +++ + + + +
Sbjct: 82 QSNALVHELANFLSHRAV-IGWVLLLTMIFFSSLAFTVLENAMSLIFVHRVVVRRRHFLL 140
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ ++ + Y+L V ++I++FV + A F +L + +
Sbjct: 141 SAMLPYCYILCLGVGILIVTFVSSGLEAIGAEGIDLFGLHVSLQGLSRVVLYLLGLAGEV 200
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L ++L +P + + L G + + W + + Y T S S +Y L +
Sbjct: 201 FVLTSIYLVMPVGRPSLKHALFGGVVAAVLWEITRHVLVWYFATLSQVSVVYGSLTMAIV 260
Query: 251 CLVFLYMLGVFFILGAEL 268
L L L +LGA++
Sbjct: 261 ILFSLEWLATLLLLGAQV 278
>gi|90417468|ref|ZP_01225391.1| hypothetical protein GB2207_07317 [marine gamma proteobacterium
HTCC2207]
gi|90330709|gb|EAS45988.1| hypothetical protein GB2207_07317 [marine gamma proteobacterium
HTCC2207]
Length = 321
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 72/188 (38%), Gaps = 10/188 (5%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
I + A SN + + N + R + ++ V A ++L +
Sbjct: 1 MAIILVTALLMLSN----IEKTFNHIWATTGSR-----KGLAGFLVYWAILSLGPLLLAV 51
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
I + + L ++ Y L ++ +++ +P K +++ G
Sbjct: 52 GMIMSTCLMSLRLMVTEVDSLGLVALLFSYLPWLLTWLAFTLLYVAVPNCKVRVVYAAFG 111
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ T + + LF + S Y+ +Y A I L+++Y+L + + GAEL S+
Sbjct: 112 GLITTLLFETAKALFGQLVAH-SIYTNVYGAFAVIPLFLIWIYLLWMLILFGAELVRSLE 170
Query: 274 IYYWRKKP 281
+ ++ +
Sbjct: 171 TFQYQGRD 178
>gi|193216445|ref|YP_001999687.1| ribonuclease BN-like family enzyme [Mycoplasma arthritidis 158L3-1]
gi|193001768|gb|ACF06983.1| ribonuclease BN-like family enzyme [Mycoplasma arthritidis 158L3-1]
Length = 371
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/288 (15%), Positives = 97/288 (33%), Gaps = 20/288 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ +I+ A + + + + ++ LS P ++ G +
Sbjct: 67 LKSSKSKGREIVNSAYKKINSNEFAFIPAGYAMYLFLSFIPIACLLLSVIGPISPEYNAI 126
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ ++ P + K + D + + AL+ + SS G S++ Y
Sbjct: 127 LKLAILGRIIP-GVEKVLPDMASIWNSAGGAITLILFALSVIWLSSKGYAKFVHSIDALY 185
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-------------- 166
+ + R+ +L + L I+ F A LA F
Sbjct: 186 EHKSPQRAWKNRIKGVFLGVLIAFGLTILLLAFTAFMSFLAKESAFGDLSPATLSKENLT 245
Query: 167 ---FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
L+ + I + ++G + P K KI + PG + T I V
Sbjct: 246 LADLKLRWEFWLVYYFSIIITLPIVTYLGFLIFFKLAPNFKIKIAHVHPGALITAIPTSV 305
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
++F + + Y + +A+ M ++ + + F +G +NA+
Sbjct: 306 FILIFGS-LTSIIPYGK-FGPVAAFMYLILLMVFMSYFIYVGVIVNAT 351
>gi|256423035|ref|YP_003123688.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
gi|256037943|gb|ACU61487.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
Length = 302
Score = 68.3 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 105/282 (37%), Gaps = 6/282 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
REYF + + + + D +A + A ++ P ++ + G L + +
Sbjct: 3 REYFKSIIRTLRVSFQVLQNNDPLRLAGATAFFASFALPPILLILLQVFGLLFDRRSIGR 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I + + A+ + + + I + + ++ ++ +R SLN+
Sbjct: 63 QLIGRLGELVGKDSAQQVVITLRGFRGLAQTWPIAIILFVFLLFVATTLLKVIRSSLNQV 122
Query: 120 YRVV-EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + +R ++ L+ L+ ++ V A A++ + L I+
Sbjct: 123 WMIRIAVRESFLDSLLGRLRSLIVIGAAGLLFLASVLGESAHAFLGNYVNELFPSAAFIF 182
Query: 179 NGRI--YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+G ++L + + +LP A+ G + T + + +G ++ ++
Sbjct: 183 SGVFTQLVSLLIVTCWFAVLFRYLPDARPTWKVAFSGALLTGVLFSIGKLVLRR-LLYGG 241
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+Y AS + ++F++ + F GA + R
Sbjct: 242 NIGILYGASASAVLLMLFIFYSAIIFYYGAAFTKVWSEFKHR 283
>gi|330004638|ref|ZP_08305005.1| tRNA-processing ribonuclease BN domain protein [Klebsiella sp. MS
92-3]
gi|328536553|gb|EGF62887.1| tRNA-processing ribonuclease BN domain protein [Klebsiella sp. MS
92-3]
Length = 141
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 46/111 (41%)
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
+L +I N ++ + ++ +P + + + G + + + G F
Sbjct: 24 WASDLDGVIDNLLRLFPLILSWAAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAF 83
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YI TF +Y +Y ++ + V++Y +LGAE+ ++ Y K
Sbjct: 84 ALYITTFPSYQLIYGVISVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 134
>gi|123967648|ref|YP_001008506.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. AS9601]
gi|123197758|gb|ABM69399.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. AS9601]
Length = 304
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 101/286 (35%), Gaps = 23/286 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--F 58
M+ + ++ A E + + D +++ + L S FP ++ ++A + Q
Sbjct: 1 MQRSSTWILKSLWGACERWSKSDCVDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I + P + + + + ++ G + A+ + + N +L+
Sbjct: 61 DQQIIAIAAQILPPSVVELVETTLFNLID-QGFGAGILGAMFLLFTAGNAYLSLQRGSDR 119
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV-- 163
+N A+RV + + R+ +F V +V+ + +
Sbjct: 120 LWEDEIPSKKVNAAWRVQASK-FLRNRVEAFLIVFFIGFLMVLDQISANLRMIPSNVLEN 178
Query: 164 ----RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
L L ++ G+ ++ + + + LP+ K + +LPG I
Sbjct: 179 LSKSNNLISDLLLKLPLLQVGQFAIPLIGFSLMALLLQALLPSRKVPLKPLLPGAFLIGI 238
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + I++ Y + + +++++LGV G
Sbjct: 239 GLTTLNLAVSKSILSLGVRFQAYGFIGGFLVLTLWVWLLGVILYFG 284
>gi|42524302|ref|NP_969682.1| ribonuclease BN [Bdellovibrio bacteriovorus HD100]
gi|39576511|emb|CAE80675.1| ribonuclease BN [Bdellovibrio bacteriovorus HD100]
Length = 248
Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/260 (18%), Positives = 91/260 (35%), Gaps = 16/260 (6%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
+ + +A+ +S S L++ PFI V A G F P V ++ E
Sbjct: 1 MRDGELQLVAASLSFSTALALVPFIAVVLATFQSIGGLEAFYPKVEALLLSNMKEAAGSG 60
Query: 78 ITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
T + VL G L T A+ S + + + ++R + R +Y + +
Sbjct: 61 FTKMMKVVLKNVNAGKLGTAGAVFLFITSIRLIHDMEVGIHRVWNQRNTRPFYKRLIYHW 120
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
G VL V L I +V + PA + L L L V
Sbjct: 121 GLVLAIPVFLAIYVGFTSLEQ--FQFVHRVIPA------------TVSNSLVLVGTLFLV 166
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ +P + + + + ++ + F Y+ +Y A++ L+++
Sbjct: 167 YKMVPDVRVRAKAAFISSLLASVTLFGVHKGYVLLAKKFFAYNKLYGSFAALPLLLLWIL 226
Query: 257 MLGVFFILGAELNASMIIYY 276
L + G L AS+ +
Sbjct: 227 TLWYVILGGVALCASLQKRH 246
>gi|239906323|ref|YP_002953064.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
gi|239796189|dbj|BAH75178.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
Length = 309
Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 68/232 (29%), Gaps = 12/232 (5%)
Query: 38 SVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI 96
S P + L G + + + I + + ++L
Sbjct: 48 SSVPLLFAMLALCGAVSGEDWTGQMALRRQLAILTPYIDELLVSRARRLLWASPGFSLE- 106
Query: 97 SALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFV 154
SA+ + S + A R +L R E R RL+S + +A V + +
Sbjct: 107 SAVFVLWSSWLFLGAFRRALRRPLGEAAPEQRPPLAARLMSTAWGAIAGVLFLGALTAAL 166
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
+ + P L + +L L +L + + +I
Sbjct: 167 YL--------AYLPRLEPRGSLARQWSAAWGVLCLTGMFAAAYLLFLPGRRPLRAIAGVS 218
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
++ F ++ Y +Y L + L++L + GA
Sbjct: 219 ALLAVAAWAVTAAFGQFVAHGGRYELVYGSLGGAVLFLLWLQYNACLVLWGA 270
>gi|42523703|ref|NP_969083.1| RNase BN [Bdellovibrio bacteriovorus HD100]
gi|39575910|emb|CAE80076.1| RNase BN [Bdellovibrio bacteriovorus HD100]
Length = 284
Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 17/281 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V + ++ E F + A+ ++ S+ P ++ + LG + ++ V
Sbjct: 4 VKNFVFTFAERFSDCHTMTWAASVAFYTCFSLAPLVMISLAVVTNLGL-ELQLAFMNEVR 62
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYR---V 122
A+ + + + + + +R +L
Sbjct: 63 SLVGPTAAQAMETVVRNANDRVDLRSLAGLLGTVTLVLSAGLIFGEMRAALTEILGHKVE 122
Query: 123 VEMRSWY---ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
E S+ IT L S + + + V + + L V + + +
Sbjct: 123 EEELSFLHATITYLKSRLLQIGLAFGFIFAMMVSLLVTAVLNTVVRV--GILEKGGGAFL 180
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I ++L + + FLP + + + T + +V+G + Y+ S +
Sbjct: 181 VNIVLSVLVYILLFTGIFHFLPVPRLALRDAFHAGVITALLFVIGKEVVGLYLGG-SFIT 239
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ Y SI+ L ++Y + +GA IY WRK+
Sbjct: 240 SSYGAAGSIVVLLAWVYYSTLIVFIGAH-----SIYSWRKE 275
>gi|152965828|ref|YP_001361612.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151360345|gb|ABS03348.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 351
Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 24/260 (9%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F E+ G +A+ ++ LLS+ P ++ + + G++ G V+D P
Sbjct: 23 VVYKFFEDQGPYLAALVAYYGLLSLVPLLLLLSTILGYVLAGNPGAQQAVLDSAVTQIP- 81
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVV--EMRSWY 129
+ E+ ++ G +A A + S GV A++ + N A+ V E + +
Sbjct: 82 ----VLGQEVGDPGSLGGGGAGLAIGIAGALYGSLGVGLAVQNATNIAWGVPRNERPNPF 137
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL S + L++ + +FV L V + ++ W R+ T+LA
Sbjct: 138 KARLRS--------LLLMVTAGLFVVGTTVLNVV--LADVFVDDGVLRWASRLGYTVLA- 186
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG--LAS 247
+G A + I ++LPG + + W F +V + + +
Sbjct: 187 AVGFTMAFWLAVAHRPPITTVLPGALTMAVLWQFLQR-FGQGLVNLVSERASVSNQVFTA 245
Query: 248 IMTCLVFLYMLGVFFILGAE 267
++ + FL++ +L E
Sbjct: 246 VLGLIAFLFITSCVVVLCVE 265
>gi|300784460|ref|YP_003764751.1| tRNA-processing ribonuclease BN [Amycolatopsis mediterranei U32]
gi|299793974|gb|ADJ44349.1| tRNA-processing ribonuclease BN [Amycolatopsis mediterranei U32]
Length = 340
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 99/261 (37%), Gaps = 7/261 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
D I A +++ G+ + I+ +LLS+ P ++ +++ GF+ + T++ +
Sbjct: 22 LDHIARATNRYIDAGGYHYVASITYFSLLSLVPLLMVASSVGGFVLATQPHLLDTLVHAI 81
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV-VEM 125
P + T+ + + + + Y N + ALR SL +
Sbjct: 82 VSTLPGGLGDKATELLTGFV-EQRTSVGVVGLGIGLYSGWNWMNALRDSLTALWGQNRSD 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIY 183
+S + +L + L++ + ++ +Y+ + ++ +
Sbjct: 141 QSLPRLIAVDLLALLGLTAALLVSFTLTISGTALGSYLLRLAGLDDTSWGHQLVSASSVP 200
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ A ++ ++V LP K + S + G + + + V + Y+ T A
Sbjct: 201 LSLAADWLVFLWVLTRLPRQKVGVRSAIRGAVALAVGFEVLKLAGGFYLRLIGDSPTGIA 260
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
SI+ + F+ ++ +
Sbjct: 261 -FGSIIGLIFFISLVARLLVF 280
>gi|239929348|ref|ZP_04686301.1| ribonuclease BN family membrane protein [Streptomyces ghanaensis
ATCC 14672]
Length = 302
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 90/262 (34%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ ++ ++ +++FP + A + T+ D + P
Sbjct: 23 WRSYERLDRVHWTRLAAAMTFTSFVALFPLLTVAAAIGAATLGQDRQETLQDAITDQVPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYI 130
+ + +++Q A + I+ + + R L + + E +
Sbjct: 83 ISDELNVGDLVQ----NAGTVGLIAGTVLLFTGIRWAGSTRECLRAVWELPDEEENPFLR 138
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL- 189
+ V L LV ++ VA L G ++ +A +
Sbjct: 139 RGKDAGVLVGLGGALLVTLAASTVASALVGRISDAIGLEKGGWGGVVLRIAAFAVAVGAD 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP + +L I + + + +L + Y+ + S MY +
Sbjct: 199 FLLLLYVLTLLPGVEPTRHRLLVAAITGAVGFELLKLLLSGYMQGVAAKS-MYGAFGVPV 257
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A+
Sbjct: 258 ALLLWINFTAKLVLFCAAWTAT 279
>gi|91204478|emb|CAJ70978.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
Length = 588
Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 80/187 (42%), Gaps = 2/187 (1%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
L I +F N + + S N +++ + RS + R + ++ ++I++
Sbjct: 255 LGAIGLTFLLFFVINTIGNIEASFNDIWKIKKSRSVF--RKFTDYTSIMFVFPILILTST 312
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
+ L + +G + + ++ ++AL++ I V++FLP + +++ +
Sbjct: 313 TITAVLTNEKLVTLLNKIGFGKIYLSTLGLFLPIVALWMAFISVYIFLPNTRVRVIPGII 372
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
G I + + V + + + Y+ +Y A++ L++L M + GA ++ +
Sbjct: 373 GGIIGGTLFYILQVFYFKSQIGLARYNLIYGAFAAVPFFLLWLQMSWNVVLFGAVISYVI 432
Query: 273 IIYYWRK 279
+ K
Sbjct: 433 QNIRFIK 439
>gi|326777113|ref|ZP_08236378.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
gi|326657446|gb|EGE42292.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
Length = 340
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 99/265 (37%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ + E +A+ I+ + L++FP + GA +A L + + V T+ D + P
Sbjct: 33 VWRSYERLDRVHWARLAAAITFISFLALFPLLAVGAAVAAALLSDEQVDTIKDKLADQVP 92
Query: 72 EVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SW 128
I+D++ + L A + ++ + V +LR L + + E++ +
Sbjct: 93 G-----ISDQLGIDGLIANAGTVGLVAGALLLFTGIGWVGSLRECLRAVWELDEVQEANP 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ ++ + V A+ + N + + +
Sbjct: 148 VVAKVKDAVLLVGLGGAGLATLAVSTVGSTAVGWTADQIGIPENGVGGVLLRVAALAVAV 207
Query: 189 L--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ F+ L+++ LP + ++ + + + + +L Y+ + S MY
Sbjct: 208 VADFLLLLYLLTLLPGVEPPRRRLMVAALLGAVGFELLKLLLGSYMREVAGKS-MYGAFG 266
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 267 VPIALLLWINFTAKLLLFCAAWTAT 291
>gi|330444602|ref|YP_004377588.1| ribonuclease BN family protein [Chlamydophila pecorum E58]
gi|328807712|gb|AEB41885.1| ribonuclease BN family protein [Chlamydophila pecorum E58]
Length = 430
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 92/255 (36%), Gaps = 3/255 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A + + A +S LLS P +VF L+ +L ++ + + F + E I
Sbjct: 31 AFKILWRNESTKEACTLSYYGLLSCIPILVFFLRLSQYLFSNIQWQEWLVLKFPDYKEPI 90
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMRSWYITRL 133
+ E + + GL + + ++ + +L LN+ +R +
Sbjct: 91 HAIV--EAARNSSGSNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWTPVSRQRLI 148
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+L++ + +I+ +V I + + + + I+ + L++ L
Sbjct: 149 AYLIIILISPMIFIILCGAWVYITQIMPLQYPLLFKINSSITAIYLFSRLVPYVILYLTL 208
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ FLP S L + W+V F YS Y L ++ + L+
Sbjct: 209 FCLFSFLPRVFVDKPSALISSLIVGSIWIVFQKAFFCLQALLFNYSFTYGALVALPSVLL 268
Query: 254 FLYMLGVFFILGAEL 268
LY ++ G L
Sbjct: 269 LLYSYATIYLFGGAL 283
>gi|86739376|ref|YP_479776.1| ribonuclease BN [Frankia sp. CcI3]
gi|86566238|gb|ABD10047.1| ribonuclease BN [Frankia sp. CcI3]
Length = 411
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 90/261 (34%), Gaps = 15/261 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVI 63
D + A + + G +A+ + A LS FP I + GF+ ++
Sbjct: 26 RPFLDHLVRAYSRYTADGGDRLAASATYFAFLSFFPLIALAFAVTGFVVDAYPDVQESLT 85
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + K I G+ I ++ALR ++ +
Sbjct: 86 RQINDYLPGLADKLDVASI----GNAKVGVGIIGLAGLLLAGLAWIDALRDAIRLVWHQD 141
Query: 124 -EMRSWYITRL----ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
++ + RL + G L +LV+ S A L+++ +
Sbjct: 142 IDVGNIITRRLRDVTVLAGLGLTLLASLVVTSLSTSATGSFLSWIG--LSGSTAAAWVTG 199
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +++ LP ++ ++ G + + + ++ ++V +
Sbjct: 200 LLALLVALAIDTAVFLYLFWRLPQQTDRVRTVR-GAVLGAVGVEILKIV-GTWLVGQTMS 257
Query: 239 STMYAGLASIMTCLVFLYMLG 259
+ +Y A I+ L+++ ++
Sbjct: 258 NPVYGTFAVIVGLLIWINIVM 278
>gi|293390889|ref|ZP_06635223.1| ribonuclease BN [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951423|gb|EFE01542.1| ribonuclease BN [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 122
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 48/98 (48%)
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L+ + +++ +P K I G + + + +G F YIVTF +Y +Y
Sbjct: 17 FVPFLSTWFIFTVIYMAVPNKKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQLIY 76
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+A++ L+++ + F +LGA+L A + +K+
Sbjct: 77 GAMATLPIMLLWIQLSWTFVLLGAQLAAVLAEVRSKKQ 114
>gi|315444780|ref|YP_004077659.1| hypothetical protein Mspyr1_32080 [Mycobacterium sp. Spyr1]
gi|315263083|gb|ADT99824.1| predicted membrane protein [Mycobacterium sp. Spyr1]
Length = 341
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 83/218 (38%), Gaps = 20/218 (9%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRI 114
Q+ +ID +P I +++ + ++ + + A + GV +AL+
Sbjct: 64 PQWRAEIIDSAISQFP-----LIGEQLSRPESLSGGTTAVVIGIVGALYGGLGVGQALQN 118
Query: 115 SLNRAYRVVE--MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+++ + V R +R+ S +++ LV + + L LG
Sbjct: 119 AMDTVWAVPRYVRRDPIKSRVYSILLLIVLGSFLVGTTLL-----TGLGRNWANLGFLGT 173
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+++ + + A + A+ + +LPG + + W Y+
Sbjct: 174 SAVVVGSVLLNAAVCAVAL------RVTTVRPLTWTQVLPGAVLAAVLWQALQWFGATYV 227
Query: 233 VT-FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
++ S + A ++ L FLY++ F++ AE+N
Sbjct: 228 SHVVASASVTNSVFAIVLGLLAFLYLVSTAFMICAEIN 265
>gi|145224447|ref|YP_001135125.1| ribonuclease BN [Mycobacterium gilvum PYR-GCK]
gi|145216933|gb|ABP46337.1| ribonuclease BN [Mycobacterium gilvum PYR-GCK]
Length = 341
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 83/218 (38%), Gaps = 20/218 (9%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRI 114
Q+ +ID +P I +++ + ++ + + A + GV +AL+
Sbjct: 64 PQWRAEIIDSAISQFP-----LIGEQLSRPESLSGGTTAVVIGIVGALYGGLGVGQALQN 118
Query: 115 SLNRAYRVVE--MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+++ + V R +R+ S +++ LV + + L LG
Sbjct: 119 AMDTVWAVPRYVRRDPIKSRVYSILLLIVLGSFLVGTTLL-----TGLGRNWANLGFLGT 173
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+++ + + A + A+ + +LPG + + W Y+
Sbjct: 174 SAVVVGSVLLNAAVCAVAL------RVTTVRPLTWTQVLPGAVLAAVLWQALQWFGATYV 227
Query: 233 VT-FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
++ S + A ++ L FLY++ F++ AE+N
Sbjct: 228 SHVVASASVTNSVFAIVLGLLAFLYLVSTAFMICAEIN 265
>gi|294782534|ref|ZP_06747860.1| ribonuclease BN [Fusobacterium sp. 1_1_41FAA]
gi|294481175|gb|EFG28950.1| ribonuclease BN [Fusobacterium sp. 1_1_41FAA]
Length = 416
Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 92/259 (35%), Gaps = 12/259 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ A E + + + +S +L++ P + +L + GA ++ I +
Sbjct: 21 MLKRAYEKYKGANSSFWVTSLSFYTILAIVPILAILVSLGSWFGAKDYIINQIKDIAP-L 79
Query: 71 PEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +TD +L + L + + + + N + + + RS
Sbjct: 80 KGETLELLTDFSNNLLMDARSNVLAGVGFIFLGSTFIKMFSLIEDAFNEIWHIKKSRSLI 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + ++ + + F + ++ + + + +L++
Sbjct: 140 RKISDYISFFIFLPLVFITLNGISLF----------FLAKIKDIGFLYYLIKNILPLLSM 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I V L +P K+ L I +++ + +F YST+Y + I
Sbjct: 190 TIFFTAVFLVMPNTTVKVFPALVASIIVSVAFFMFQYIFILLQFLLIGYSTVYGSFSVIF 249
Query: 250 TCLVFLYMLGVFFILGAEL 268
++++ + ILG +
Sbjct: 250 IFIIWIRIFWFIVILGVHI 268
>gi|284166081|ref|YP_003404360.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284015736|gb|ADB61687.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 285
Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 88/262 (33%), Gaps = 8/262 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ D + E A+ ++ A ++ P ++ A + + + + ++ G
Sbjct: 7 FALVRDVVAVAHERQLSVTAAGLAYHAFNTLVPLVILALVGASLVDGLEPLVSTLEAAAG 66
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
V + ++ + + +A+ + Y S+
Sbjct: 67 IEGAVTDGGLEGMTG---GSARTRAALLAVAVLLWSAVRLFQAINSAFTDVYGARTDESY 123
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
T L V + + V VA+ + G +
Sbjct: 124 VATTTTVTLVTALYVVLVTVTIAVGVALVTVVGVSLSVVVDGGWTAAGSTLLLAGLLLAV 183
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F ++ P + +LPG F +SW V AV F + T S ++ +I
Sbjct: 184 FFP----MYYLFPQPNVSVGEVLPGTAFAAVSWTVLAVGFRFCVST-SESVALFGIAGAI 238
Query: 249 MTCLVFLYMLGVFFILGAELNA 270
+ L ++Y+ G+ +LGA LNA
Sbjct: 239 LLVLTWVYLGGLCLLLGAVLNA 260
>gi|227497374|ref|ZP_03927606.1| membrane protein ribonuclease BN family protein [Actinomyces
urogenitalis DSM 15434]
gi|226833245|gb|EEH65628.1| membrane protein ribonuclease BN family protein [Actinomyces
urogenitalis DSM 15434]
Length = 411
Score = 66.8 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 96/263 (36%), Gaps = 17/263 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-LAGFLGA-HQFVPTVIDVVFGA 69
+ + + G +A I+ + L SVF + G + L +G Q V+D +
Sbjct: 53 LGRMLARYGNVRGGLLAGGIAYTGLFSVFAGLAIGVSVLMATIGRHPQIRDAVLDSIGSL 112
Query: 70 WPEVIAKPITDE---ILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYR-VVE 124
P V+ I Q+ A L ++ L Y + + AL+ + + V
Sbjct: 113 LPGVVDDGSGGGLVSIDQLTLDSALNLGSVLGLLTMLYSAMGLMGALKNGVRAMFGIVTL 172
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVA---IPLALAYVRKFFPALGNLLLIIWNGR 181
+ + +L + L+ V ++ + V + A+ ++ + G +
Sbjct: 173 PHNPVVNQLANLAGFLVIMVAVLATAMASVLTSAVAGAMDFLPSWLSGPGVKAATL---- 228
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A + G++ + + L + ++ G +++ + V + + M
Sbjct: 229 --ALSFLIDAGVLALIIRLSGPRVPRRDLVAGAAIGALAFGALRQV-GTSAVGSVSSNPM 285
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A A+++ +++L++ +
Sbjct: 286 LASFAALVVLILWLHLASRVVLY 308
>gi|160915379|ref|ZP_02077591.1| hypothetical protein EUBDOL_01387 [Eubacterium dolichum DSM 3991]
gi|158432770|gb|EDP11059.1| hypothetical protein EUBDOL_01387 [Eubacterium dolichum DSM 3991]
Length = 275
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 96/260 (36%), Gaps = 28/260 (10%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ E F +G +S S LL++ P I+ + L + + V++ V P
Sbjct: 4 LFRIYEEFTSFEGSLFKYALSFSILLAIAPSILLFSMLFRYAYLP--IDMVLNFVRSFLP 61
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALA--AAYFSSNGVEALRISLNRAYRVVEMRSWY 129
++ A+ + D+I G+ + A + Y +S + + L A +
Sbjct: 62 DINAETL-DQIFLFFVDKDYGILSFIITACTSFYLASRSIFSFL--LISAAHEKVDVPKW 118
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ + V V ++ V +A K FP + +
Sbjct: 119 SIRIKA-------VVMFVFLTVVLLAGVYLTTKFSKLFP--------------LISAGLM 157
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L K + G +FT + + A LF + F++Y +Y +A ++
Sbjct: 158 LFMFTATYRMLSFRKRNVSFGFIGGMFTTLGIMGLADLFISIVHNFTSYEDIYGPIAVLV 217
Query: 250 TCLVFLYMLGVFFILGAELN 269
T L+ +Y++ LG +N
Sbjct: 218 TSLLAIYLISCIIYLGFCIN 237
>gi|126658678|ref|ZP_01729824.1| Ribonuclease BN [Cyanothece sp. CCY0110]
gi|126620115|gb|EAZ90838.1| Ribonuclease BN [Cyanothece sp. CCY0110]
Length = 139
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 2/127 (1%)
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIY-ATMLALFIGLIFVHLFLPAAKSKIMSILP 212
+ I AL+ + + L + +W + + + + + ++ +LP K +
Sbjct: 1 MIISAALSGLNHYLSELIPGIDFLWQIINFCLSFVVISLAFGLMYRYLPDVKISWDDVKI 60
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
G I T + + +G Y+ ++ ++Y S++ LV++Y GAE
Sbjct: 61 GAIITALLFTIGKFALGLYLGR-GSFGSVYGAAGSLIIILVWVYYSAQILFFGAEFTQVY 119
Query: 273 IIYYWRK 279
Y K
Sbjct: 120 AKRYGSK 126
>gi|326381943|ref|ZP_08203636.1| ribonuclease BN [Gordonia neofelifaecis NRRL B-59395]
gi|326199369|gb|EGD56550.1| ribonuclease BN [Gordonia neofelifaecis NRRL B-59395]
Length = 353
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 98/262 (37%), Gaps = 7/262 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGAWPE 72
++ + G A A+ IS +LS+ P ++ +A F+ + + D + P
Sbjct: 31 TLDRYNHRRGNAYAAAISFIGILSLVPVMMVSFAIAAFVLVWNPTLLTDITDAIVEHVPG 90
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + I +A + I ++AA + +R L + R+ + +
Sbjct: 91 ALGEQLNSVIDSAIASRRT-VGVIGLISAALAGIGWMTLMRNGLTEMWGGRVKRNAVLAK 149
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL--- 189
+ G + + + + + L F + + + + + + ++A+
Sbjct: 150 VYDLGTFAVLGLLFLTTIAMNIVSTGPLGRQILEFVGIPDSGVTSFLLKASSVIIAVSAT 209
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ I V ++P + +I+ + T + + + + + Y+ + I+
Sbjct: 210 WVLFIVVLAWMPRCAVSVRAIVWPALGTAVIFEILKSVSSLYLQSVLGSPAG-TAFGPII 268
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
+VF Y+ + A +A+
Sbjct: 269 GVMVFAYLASRIVLYAAAWSAA 290
>gi|262067435|ref|ZP_06027047.1| ribonuclease BN [Fusobacterium periodonticum ATCC 33693]
gi|291378798|gb|EFE86316.1| ribonuclease BN [Fusobacterium periodonticum ATCC 33693]
Length = 416
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 93/259 (35%), Gaps = 12/259 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 21 MVKRAYEKYKGANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAKDYIIDQIKDIAP-L 79
Query: 71 PEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +TD +L + L + + + S N + + + RS
Sbjct: 80 KGETLELLTDFSNNLLMDARSNVLAGVGFIFLGSTFIKMFSLIEESFNEIWHIKKSRSLI 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + ++ + + F + ++ + + + + ++
Sbjct: 140 RKISDYISFFIFLPLLFITLNGLSLF----------FLSKIKDIGFLYYLIKNLLPLFSM 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + L +P K+ L I +++++ +F YST+Y + I
Sbjct: 190 TIFFTALFLVMPNTTVKVFPALVASIIVSVAFLMFQYIFILLQFLLIGYSTVYGSFSVIF 249
Query: 250 TCLVFLYMLGVFFILGAEL 268
++++ + ILG +
Sbjct: 250 IFIIWIRIFWFIVILGVHI 268
>gi|90413234|ref|ZP_01221229.1| putative membrane protein [Photobacterium profundum 3TCK]
gi|90325786|gb|EAS42244.1| putative membrane protein [Photobacterium profundum 3TCK]
Length = 318
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 93/272 (34%), Gaps = 21/272 (7%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D + A + F + G + I+ + LS+ P ++ AGF+ + +ID +
Sbjct: 34 DHLLRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFVLAANSDLLTGLIDKIV 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + + + A Y + + LR ++ + R
Sbjct: 94 TGVTDPSLAKTLENTVNTAINQRTTVGLSGLAIALYSGISWMGNLREAIR-----AQTRD 148
Query: 128 WYITR-------LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW-- 178
+ + L+ +G +A LV VA+ +K L I W
Sbjct: 149 VWERKPEDKDHLLLQYGKDFVALTGLVAALIFTVALTSVAGSAQKTIVEALGLGGITWLR 208
Query: 179 ----NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ ++ A ++ +++ LP K + ++L G + I + V T + +
Sbjct: 209 PALTLIALTISITANYLMFLWIFWMLPKKKLETRALLQGTLLAAIGFEVIKFAMTIILPS 268
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ S A SI+ + F Y + A
Sbjct: 269 LAK-SPSGAAFGSIIGLMAFFYFYARLTLFCA 299
>gi|319790281|ref|YP_004151914.1| ribonuclease BN [Thermovibrio ammonificans HB-1]
gi|317114783|gb|ADU97273.1| ribonuclease BN [Thermovibrio ammonificans HB-1]
Length = 268
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/251 (17%), Positives = 94/251 (37%), Gaps = 16/251 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A+ E D A+ ++ L+S+ P +F FLG F + +
Sbjct: 19 ALCDTFERDYQFFAASVAYYTLMSIVPLFIFLF----FLGMEVFHVDFKQFIPQQFLNSP 74
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+PI ++I V++ + + +A +FS +L S + + ++
Sbjct: 75 LRPIFEQIEDVVSN-SGIISGTAAAVMLWFSRGIFLSLEKSFSEILGRENPAGFLYRHIV 133
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
++L L I+ F F LA + P L L ++ ++ + +
Sbjct: 134 ----IILVIFLLWILMFFFYVAQYLLAILLPQVPELSFLSSLLVPVLLFLVLFGV----- 184
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ FL K + + F ++ + F +IV S S +Y A+++ L++
Sbjct: 185 --YYFLLPVKVPMGFVFKVSTFVFLLLALFERFFVWFIVHVSKVSILYGSFAAVIIFLLW 242
Query: 255 LYMLGVFFILG 265
+Y ++G
Sbjct: 243 IYYSATVILIG 253
>gi|289444249|ref|ZP_06433993.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289417168|gb|EFD14408.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length = 172
Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 61/164 (37%), Gaps = 10/164 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + ++ I + ++ ++ ++ + + LS+ P ++ ++ F P
Sbjct: 7 KPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVA-PLFGPD 65
Query: 62 VIDVVFGAW---------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
+ + + P V+ + I I + + ++ L + + S+ + A
Sbjct: 66 TLPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAF 125
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI 156
++ A+ +R R + ++ V LV + V V +
Sbjct: 126 VDAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVV 169
>gi|24215362|ref|NP_712843.1| ribonuclease BN [Leptospira interrogans serovar Lai str. 56601]
gi|45657209|ref|YP_001295.1| ribonuclease BN transmembrane protein [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|24196473|gb|AAN49861.1| ribonuclease BN [Leptospira interrogans serovar Lai str. 56601]
gi|45600447|gb|AAS69932.1| ribonuclease BN transmembrane protein [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 749
Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 162 YVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+ ++ I RI + +++ + ++ +P K + + G T + +
Sbjct: 495 FATTLITGGDSVFTIYSFLRILFPLSGIWLFFLSLYSLIPNTKVPLKASSVGAAVTGVIF 554
Query: 222 VVGAVLFTHYIVTFS-TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+V F YI++F+ T +Y LA+I L+ +Y L + + GAE+ A +
Sbjct: 555 LVFLWGFQVYILSFTETTMIIYKALAAIPIFLLGVYSLSLIVLFGAEITACLQFRERYIA 614
Query: 281 P 281
P
Sbjct: 615 P 615
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-----HQ 57
F I II + F+++D AS IS + ++S+ P + +L +
Sbjct: 23 RTFVIFIRIILGSAYRFIKDDCLMQASGISYTTIVSLIPMLTVALSLITITSGLENRKEE 82
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
T+ + + + P + I ++ ++ + I + + ++ + +L + N
Sbjct: 83 IFDTINTFILQSNISIDINPYLETIGDLIDTASQ-IGAIGFITLVFSATAVLRSLENAFN 141
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+++ RS + Y + ++ ++ V + + R
Sbjct: 142 GIWKIHSNRSLFQKL---IFYFFVLAIGPLLFVIVEGIAKRTIDFFRP 186
>gi|21223222|ref|NP_629001.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289769568|ref|ZP_06528946.1| integral membrane protein [Streptomyces lividans TK24]
gi|7649576|emb|CAB89065.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289699767|gb|EFD67196.1| integral membrane protein [Streptomyces lividans TK24]
Length = 321
Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/262 (15%), Positives = 100/262 (38%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ ++ ++ +++FP + A +A Q + D + P
Sbjct: 34 WRSYERLDRVKWSRLAAAMTFTSFVALFPLLSLAAAVAAATLNKQQQDKLQDKLAEQIPG 93
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYIT 131
+ + I ++ A + ISAL + +EA R L + + E + +
Sbjct: 94 ISDQL---NIQGLVDN-AGTVGVISALLLLFTGMGWIEATRGCLRAVWELPDEDENPVLH 149
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATMLAL 189
R G ++ L+I + + ++ + + ++++ +LA
Sbjct: 150 RAKDAGVLVGLGGALLITVGISTVASALVGWIIRTIGLAQGGVGGVLLYVAAFAVAVLAD 209
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP + + ++ + + + + +L + YI + S MY +
Sbjct: 210 FLLLLYVLTLLPGVQPERRRLVVAALIGAVGFELLKLLLSGYIQGVAAKS-MYGAFGVPV 268
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A+
Sbjct: 269 ALLLWINFTAKLVLFCASWTAT 290
>gi|242309514|ref|ZP_04808669.1| tRNA-processing ribonuclease BN [Helicobacter pullorum MIT 98-5489]
gi|239524085|gb|EEQ63951.1| tRNA-processing ribonuclease BN [Helicobacter pullorum MIT 98-5489]
Length = 281
Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 99/270 (36%), Gaps = 11/270 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ + F++ D A+ +S + ++ P ++ +L L +++ + ++V
Sbjct: 15 LLSKHLYIFLKGDLLYFAASLSFYTIFALLPMLLIVFSLVAALPEFKEYLESFKNLVITN 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + LA + L + A S + + + + R ++
Sbjct: 75 FLPTYSDVFLEYMDSFLAN-STKLGGMGLFYAFVTSILFFKNYQFIAGKIFHTK-PRGFW 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L V ++ ++ A + LG ++W RI L
Sbjct: 133 DSLAVYWTCMTLFPVGILFSIYLS-------AKAYAYLDILGYKDFMLWLFRITP-YLVT 184
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + + L +FT + W + F +Y+ Y T+Y + ++
Sbjct: 185 WAIFFVLFKISANVYISTKNTLLSSLFTALLWSLCKWGFVYYVFYNKAYLTLYGSFSILL 244
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y+ + G L+ + + ++
Sbjct: 245 FLFIWVYLSWAILLFGMSLSRGINEVFIKE 274
>gi|226327637|ref|ZP_03803155.1| hypothetical protein PROPEN_01509 [Proteus penneri ATCC 35198]
gi|225204163|gb|EEG86517.1| hypothetical protein PROPEN_01509 [Proteus penneri ATCC 35198]
Length = 339
Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 19/269 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + +I V +
Sbjct: 54 LIRAAERFTDRMGNQFGAAITYFSFLSLIPVLMLSFACAGFVLASNPDLLAKLITGVANS 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL----------NRA 119
+ + + + A Y N V LR ++ N+
Sbjct: 114 IDDPTLASTVQQSIDTAVRQRTTVGLTGLAIALYSGVNWVGNLRQAILAQSRPVWERNK- 172
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG-NLLLIIW 178
E Y F ++ L+ + A + G L +W
Sbjct: 173 ---EEQEKIYFRYFRDFLALIGLLFALIFTITLTSVAGSAQRMIVHILGLDGIEWLTPVW 229
Query: 179 NGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ +++ LP + K +S++ G + I + + + T + ++
Sbjct: 230 TTIGLTISITANYLLFLWILWILPRHQPKRISLMKGTLIAAIGFEILKSVMTWMLPRIAS 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGA 266
S A S++ + F Y + A
Sbjct: 290 -SPSGAAFGSVIGLMAFFYFFARLTLFCA 317
>gi|29829957|ref|NP_824591.1| ribonuclease BN family membrane protein [Streptomyces avermitilis
MA-4680]
gi|29607067|dbj|BAC71126.1| putative membrane protein, ribonuclease BN-like family
[Streptomyces avermitilis MA-4680]
Length = 344
Score = 66.0 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 95/265 (35%), Gaps = 14/265 (5%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ ++ + +++FP + A + + + T+ D + P
Sbjct: 62 WRSYERLDRVKWTQLAAAMTFISFVALFPLLTVAAAIGAAALSEEQQKTLQDKLAEQVPG 121
Query: 73 VIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEMRSWY 129
I+D++ + L A + I+ + V A+R L + E +
Sbjct: 122 -----ISDQLDIHALVQNAGTVGVIAGAVLLFTGIGWVGAMRDCLRAVWELDDDEENPFL 176
Query: 130 ITR---LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ G VTL + + + G++LL I +
Sbjct: 177 RKLKDGGVLLGLGGAVLVTLATSTVASAMVGWTADRLGIERDGWGSVLLHI--TAFLVAV 234
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LA F+ L++V LP + ++ + + + + +L + YI ++ S MY
Sbjct: 235 LADFLLLLYVLTLLPGVEPTRRRLVVAALIGAVGFELLKLLLSGYIQGVASKS-MYGAFG 293
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 294 VPVALLLWINFTSKLLLFCAAWTAT 318
>gi|256372749|ref|YP_003110573.1| ribonuclease BN [Acidimicrobium ferrooxidans DSM 10331]
gi|256009333|gb|ACU54900.1| ribonuclease BN [Acidimicrobium ferrooxidans DSM 10331]
Length = 350
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/278 (12%), Positives = 86/278 (30%), Gaps = 15/278 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVI 63
+ I + + F E++ A ++ S+ P ++ +A + A V V
Sbjct: 18 HKLLAIAFAIVRKFGEDNASTWALLVAYYGFASLVPLLLVAVTVASIVFAHHPNLVHDVA 77
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + A+ + + LA + + + + A + ++ + V
Sbjct: 78 HSAIASIPVLGAQFASRVRVHALASHSIIGLVVGIAGLIWGAQGVASAAQNAMANVWNVP 137
Query: 124 -EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R ++ R + +L + + V A+ L + + + G
Sbjct: 138 LVDRPGFLPRTLRNLGILAVLGLGALATSVIAALATGLGHTAVITVVIVVATVAANAGLY 197
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTM 241
L I ++ G I + W + + + + S
Sbjct: 198 VLGFRLLTPAAIAT-----------GDLVTGAIVASVVWSILQQIGGVLVTHDLAHASAT 246
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y ++ + + + + AELN ++ W +
Sbjct: 247 YGVFGIVLGLIAWFSIATEATLYAAELNVVLVRRLWPR 284
>gi|296268657|ref|YP_003651289.1| ribonuclease BN [Thermobispora bispora DSM 43833]
gi|296091444|gb|ADG87396.1| ribonuclease BN [Thermobispora bispora DSM 43833]
Length = 315
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/269 (17%), Positives = 97/269 (36%), Gaps = 6/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + + + G +A + A LS FP I ++ G+ A + P ++ ++
Sbjct: 26 LDHLVRTHQRYRHCSGDRLAGAFTYFAFLSFFPLIALAFSVFGYFAAAR--PEILTILTK 83
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-S 127
A + L+ +A I Y V+A+R +L + R +
Sbjct: 84 AIYAQLPGLAERLPLEQIADARVPAGIIGLGGLLYAGLGAVDAMRYALREIWMAGLPRHN 143
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYAT 185
+ RL +LL VT + V A V +F G+ +W + A
Sbjct: 144 PLVGRLRDLVTLLLVGVTALASVAVGGFATSATGTVTGWFGLAGSPWGGAAVWLAGLGAA 203
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+LA + + +L A +L G + + + L + + + +Y
Sbjct: 204 LLADLAIFLVLFGWLAAPSQPFGVVLRGALLGAAGFGLLKQLAVLLLAH-TLRNPVYGTF 262
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A ++ L+++ + + A A+ ++
Sbjct: 263 AVVVGLLLWINLSARVVLYAAAWTATAML 291
>gi|76799896|ref|ZP_00781911.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gi|76584749|gb|EAO61492.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
Length = 136
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFT 229
L + N T L +F+G+ ++ LP A+ K+ ++PG +F+ + L +
Sbjct: 6 DTLTAWLLNLAQPVTFLTIFLGIGILYFILPNARIRKVRYVIPGTLFSTFVIGFFSNLIS 65
Query: 230 HYIVTFSTYSTMYAGLAS--IMTCLVFLYMLGVFFILGAELNASMI 273
Y++ S I +++ L ILGA LNAS+
Sbjct: 66 QYVLNRVEKMVDIKTFGSVVIFILMLWFIFLAHIMILGAILNASVQ 111
>gi|223986764|ref|ZP_03636749.1| hypothetical protein HOLDEFILI_04072 [Holdemania filiformis DSM
12042]
gi|223961285|gb|EEF65812.1| hypothetical protein HOLDEFILI_04072 [Holdemania filiformis DSM
12042]
Length = 268
Score = 66.0 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 78/218 (35%), Gaps = 24/218 (11%)
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA 111
F + + +++D P+ + P D L V L + + + +S + +
Sbjct: 43 FRSSPAGLASILDFAEQYIPQDLLSPFIDFFLGNSPVELIPLIFF-IVVSLWVASRAIYS 101
Query: 112 LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ A+ + R +S ++ +L +M FV P +
Sbjct: 102 FL--MISAHLDEVELPLWFMRGVSLIDFVVLLASLGLMVFVLQQFPFTGLLTQ------- 152
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ LF+G + L + ++ PG +FT I + F
Sbjct: 153 --------------IAVLFVGFCIFYRLLSFRNYQWRAVAPGALFTTICMSLLGTFFFFV 198
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
I F+ Y ++Y L+S++ + +Y++ LG +N
Sbjct: 199 INHFTRYESIYGPLSSMVILFLSVYIIASIIYLGFCVN 236
>gi|302553698|ref|ZP_07306040.1| ribonuclease BN family membrane protein [Streptomyces
viridochromogenes DSM 40736]
gi|302471316|gb|EFL34409.1| ribonuclease BN family membrane protein [Streptomyces
viridochromogenes DSM 40736]
Length = 322
Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 91/262 (34%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ ++ ++ +++FP + A +A + + + D + P
Sbjct: 39 WRSYERLDRVKWTRLAAAMTFTSFVALFPLLTVSAAIAAATLSTEQQEKLQDKLADQVPG 98
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY---RVVEMRSWY 129
+ + ++ A + I+ + + ++R L + E +
Sbjct: 99 ISDQLDIGTLVD----NAGTVGLIAGALLLFTGISWAGSMRECLRAVWELPDEEENPALR 154
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L ++ + I + + + + G +++ +LA
Sbjct: 155 YVKDAGVLVGLGGALLVTIAASAVASAMIGWIIRQLGVDEGGWGGVLLRIAAFLIAVLAN 214
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP + + + + + + +L + Y+ + S MY +
Sbjct: 215 FLLLLYVLTLLPGVEPTRHRLFVAALTGAVGFELLKLLLSGYLQGVAGKS-MYGAFGVPV 273
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A+
Sbjct: 274 ALLLWINFTSKLVLFCAAWTAT 295
>gi|325475223|gb|EGC78408.1| ribonuclease BN-like family protein [Treponema denticola F0402]
Length = 435
Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 86/256 (33%), Gaps = 3/256 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ IY I FV D A+ + + L+S P + + + Q
Sbjct: 23 KKGLYDFNQKIYITIVSFVNNDLLTTAAAGAYNFLMSALPIFILTLTILLRV-LKQSPQQ 81
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA-AYFSSNGVEALRISLNRAY 120
+ + + + +L V + F L + + ++ S+ + Y
Sbjct: 82 IKEALRALSIFQNTVNLDRFFHFLLNVNSFSFFEFIVLIFVLWMARRFFATIQHSIRKVY 141
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + T LI ++ + LV + + NL ++ N
Sbjct: 142 RKKIKITPLKTSLIVILGEIIVVILLVFLFIFLITGSAVFRSDFAQPVFSPNLFSLLRNL 201
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ + + + ++ +P K + L IS+ + F + + ++
Sbjct: 202 FRFIPVIFMQLFVCLIYYLMPPIKPSFKTALLSSAACTISYYFVKIFF-IFFRSTVKFTF 260
Query: 241 MYAGLASIMTCLVFLY 256
+Y +++ L+ ++
Sbjct: 261 VYGLFTNVILVLIQVW 276
>gi|291447192|ref|ZP_06586582.1| membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291350139|gb|EFE77043.1| membrane protein [Streptomyces roseosporus NRRL 15998]
Length = 330
Score = 65.6 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 103/264 (39%), Gaps = 11/264 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ I+ + L++FP I GA +A L + + + T+ D + P
Sbjct: 34 WRSYERLDRVHWARLAAAITFISFLALFPLIAVGAAIAAALLSDKQLDTIKDKLADQVPG 93
Query: 73 VIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SWY 129
I+D++ + L A + ++ + V ++R L + + +++ +
Sbjct: 94 -----ISDQLGIDGLVANAGTVGLVAGALLLFTGVGWVGSMRECLRAVWELDDVQEANPV 148
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWNGRIYATML 187
+ ++ ++ ++ V +A+ P G +++ + ++
Sbjct: 149 VAKVKDAVLLVGLGGAVLATVAVSSIGSVAVGRTADLIGIPEGGAGGVLLRVAALVVAVV 208
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ L+++ LP + ++ + + + + +L Y+ + S MY
Sbjct: 209 ADFLLLLYLLTLLPGVEPPRRRLVVAALLGAVGFELLKLLLGSYMREVAGKS-MYGAFGV 267
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 268 PIALLLWINFTAKLLLFCAAWTAT 291
>gi|300725309|ref|YP_003714641.1| hypothetical protein XNC1_4557 [Xenorhabdus nematophila ATCC 19061]
gi|297631858|emb|CBJ92579.1| putative membrane protein [Xenorhabdus nematophila ATCC 19061]
Length = 325
Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 88/270 (32%), Gaps = 21/270 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A + F + G + I+ + LS+ P ++ +AGF+ + +++ + +
Sbjct: 50 LIRAAQRFNDRMGSQFGAAITYFSFLSLIPILMLSFAVAGFVLASNPDLLARLVNGIASS 109
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + A Y N V LR ++ R + R+
Sbjct: 110 ISDPALANTLKNSVDTAVNQRTTVGLTGLAIALYSGVNWVGNLREAILVQSREIWERNHE 169
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
Y + F + LV+ + A A + G I R
Sbjct: 170 DKEKIYFQYIRDFFSLFGLLFALVMTLSLTSIAGSAQATIVHALGLEG-----IEWLRPV 224
Query: 184 ATMLALFIGLIFVH-------LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
T + + I + + LP + + S+ G + I + V + T + +
Sbjct: 225 WTSIGMTISISANYLLFLWILWILPRHRPERKSLFKGTLIAAIGFEVIKYIMTMMLPRLA 284
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ S A S++ + F Y + A
Sbjct: 285 S-SPSGAAFGSVIGLMAFFYFFARLTLFCA 313
>gi|255019177|ref|ZP_05291303.1| transport protein [Listeria monocytogenes FSL F2-515]
Length = 76
Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ +F+ F++ P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y +
Sbjct: 1 MVIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIG 60
Query: 247 SIMTCLVFLYM 257
I+ V +
Sbjct: 61 VIIIFNVMVLF 71
>gi|32267229|ref|NP_861261.1| tRNA-processing ribonuclease BN [Helicobacter hepaticus ATCC 51449]
gi|32263282|gb|AAP78327.1| tRNA-processing ribonuclease BN [Helicobacter hepaticus ATCC 51449]
Length = 295
Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 93/264 (35%), Gaps = 12/264 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R F I+++ I + +++ A+ +S + ++ P ++ ++ L Q +
Sbjct: 18 RSLFDILWNKIKSIWDFVADKELSFYAASLSFYTVFAIIPLLMIVFSIVMNLPNFQ---S 74
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I+ + I TD I L K + + Y + R A +
Sbjct: 75 QIEQIRTLILSNILPTHTDVISSYLDTFMKNSSALGMMGLGYTLVASIMFFRNYEYIAAK 134
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + + ++ +V+ ++ + V+K +L L+
Sbjct: 135 MFNSTPRKFFDSLLMYWTMITLFPIVLAFSIYFSGE-----VQKTLKGTADLSLLFDLIP 189
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T F + K++++ + T W++ F +Y+ TY ++
Sbjct: 190 YLLTWAMFF----LLFKLSANKPLKLLALFSSSLLTTSVWLLTKWAFVYYVFYNQTYKSV 245
Query: 242 YAGLASIMTCLVFLYMLGVFFILG 265
Y +A + ++++Y+ + G
Sbjct: 246 YGPIAIFLFMMLWIYVSWFVLLYG 269
>gi|256785675|ref|ZP_05524106.1| integral membrane protein [Streptomyces lividans TK24]
Length = 310
Score = 65.2 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/262 (15%), Positives = 100/262 (38%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ ++ ++ +++FP + A +A Q + D + P
Sbjct: 23 WRSYERLDRVKWSRLAAAMTFTSFVALFPLLSLAAAVAAATLNKQQQDKLQDKLAEQIPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYIT 131
+ + I ++ A + ISAL + +EA R L + + E + +
Sbjct: 83 ISDQL---NIQGLVDN-AGTVGVISALLLLFTGMGWIEATRGCLRAVWELPDEDENPVLH 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATMLAL 189
R G ++ L+I + + ++ + + ++++ +LA
Sbjct: 139 RAKDAGVLVGLGGALLITVGISTVASALVGWIIRTIGLAQGGVGGVLLYVAAFAVAVLAD 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP + + ++ + + + + +L + YI + S MY +
Sbjct: 199 FLLLLYVLTLLPGVQPERRRLVVAALIGAVGFELLKLLLSGYIQGVAAKS-MYGAFGVPV 257
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A+
Sbjct: 258 ALLLWINFTAKLVLFCASWTAT 279
>gi|260903887|ref|ZP_05912209.1| putative tRNA-processing ribonuclease [Brevibacterium linens BL2]
Length = 346
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 98/261 (37%), Gaps = 12/261 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A++ F E G + I+ +L+V P +F GF+ + +P V++ +
Sbjct: 29 LMRAVKRFGERLGNQFGAAITYFLVLAVMPIAMFTFASLGFVLDVLKPELLPVVVEQIEA 88
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-----VV 123
+ +T+++ L + + I+ LAA Y + L ++ V+
Sbjct: 89 QV--GGSSSLTEQLESFLT-SWQSVGIIAILAALYTGQGFIGNLGAAVRAQLHADFDDVI 145
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E +S+ L + +L + L++ + V + + G ++
Sbjct: 146 EDKSFVKKFLNNVVTLLGLIIGLLLTVALTVVGAGLGSVISDLLSLPGWARALLVIIPPL 205
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T A ++ +F+ LP + + G + +++ + + F +V + +
Sbjct: 206 ITFGAAWLIFMFLFTMLPDHPVGKRAKIRGSLIGALAFTIL-INFATVLVDLFSGNKAAG 264
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
SI+ ++ + + +
Sbjct: 265 VFGSIIAIMLTMNVFARIILF 285
>gi|239943732|ref|ZP_04695669.1| putative integral membrane protein [Streptomyces roseosporus NRRL
15998]
gi|239990181|ref|ZP_04710845.1| putative integral membrane protein [Streptomyces roseosporus NRRL
11379]
Length = 319
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 101/263 (38%), Gaps = 9/263 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ I+ + L++FP I GA +A L + + + T+ D + P
Sbjct: 23 WRSYERLDRVHWARLAAAITFISFLALFPLIAVGAAIAAALLSDKQLDTIKDKLADQVPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SWYI 130
+ + D ++ A + ++ + V ++R L + + +++ + +
Sbjct: 83 ISDQLGIDGLV----ANAGTVGLVAGALLLFTGVGWVGSMRECLRAVWELDDVQEANPVV 138
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWNGRIYATMLA 188
++ ++ ++ V +A+ P G +++ + ++A
Sbjct: 139 AKVKDAVLLVGLGGAVLATVAVSSIGSVAVGRTADLIGIPEGGAGGVLLRVAALVVAVVA 198
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F+ L+++ LP + ++ + + + + +L Y+ + S MY
Sbjct: 199 DFLLLLYLLTLLPGVEPPRRRLVVAALLGAVGFELLKLLLGSYMREVAGKS-MYGAFGVP 257
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 258 IALLLWINFTAKLLLFCAAWTAT 280
>gi|54308367|ref|YP_129387.1| hypothetical protein PBPRA1174 [Photobacterium profundum SS9]
gi|46912795|emb|CAG19585.1| putative membrane protein [Photobacterium profundum SS9]
Length = 308
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 90/267 (33%), Gaps = 11/267 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D + A + F + G + I+ + LS+ P ++ AGF+ + +ID +
Sbjct: 22 DHLLRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFVLASNSDLLTGLIDKIV 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMR 126
+ + + + A Y + + LR ++ + V E +
Sbjct: 82 TGVTDPSLAKTLENTVNTAINQRTTVGLSGLAIALYSGISWMGNLREAIRAQTRDVWERK 141
Query: 127 S-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWN 179
++ F + L+ + A + + G L +
Sbjct: 142 PEDKDHLFLQYGKDFIALTGLVAALIFTVALTSVAGSAQKTIVEALGLGGITWLRPALTM 201
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ A ++ +++ LP K + ++L G + I + V T + + + S
Sbjct: 202 IALTISITANYLMFLWIFWMLPKKKLETRALLQGTLLAAIGFEVIKFAMTMILPSLAK-S 260
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGA 266
A SI+ + F Y + A
Sbjct: 261 PSGAAFGSIIGLMAFFYFYARLTLFCA 287
>gi|167754796|ref|ZP_02426923.1| hypothetical protein CLORAM_00300 [Clostridium ramosum DSM 1402]
gi|237735917|ref|ZP_04566398.1| predicted protein [Mollicutes bacterium D7]
gi|167705628|gb|EDS20207.1| hypothetical protein CLORAM_00300 [Clostridium ramosum DSM 1402]
gi|229381662|gb|EEO31753.1| predicted protein [Coprobacillus sp. D7]
Length = 286
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/227 (18%), Positives = 81/227 (35%), Gaps = 36/227 (15%)
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
P +I++++ PE I P + ++ L IS + Y +SN +
Sbjct: 64 APNLINLLYDYVPETILAPFVEYVMSQEYTTFVSLI-ISMGFSIYLASNAFYSFM----- 117
Query: 119 AYRVVEMRSWYITRLISFG------YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
LIS Y +L + +++ + V + L P
Sbjct: 118 --------------LISMTDEGFDTYAILVRIKAIVVFVLLVIGLVGLTLFNYLVPINST 163
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ + LFI + +L K + L G FT V+ V F + +
Sbjct: 164 I----------VMLAGLFIVFYCFYRYLSFEKKPLSYGLIGAAFTSACIVLIGVFFFYIV 213
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ Y+ +Y LAS++ L+ +Y++ G LN + ++
Sbjct: 214 NHYTRYNALYGPLASLVIMLISIYLISSVIYFGYCLNHEYGKSFSKR 260
>gi|169630761|ref|YP_001704410.1| hypothetical protein MAB_3682c [Mycobacterium abscessus ATCC 19977]
gi|169242728|emb|CAM63756.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 342
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 95/263 (36%), Gaps = 10/263 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD I E + + +G A+ I+ + ++FP ++ + GF+ P I + G
Sbjct: 21 FDHIMRMQERYGKVNGNFFAAGITYFTVFALFPLMMVAFAVMGFV--LSRRPDTIAELRG 78
Query: 69 AWPEVIAKPITDEILQVLAV--PAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVV-E 124
I+ + ++++ ++ ++ I+ LA A ++ G + +R +L+ + +
Sbjct: 79 RISGAISGEVGNQLINLMDTAIASRTSLGIAGLATAAWAGLGWMANVRAALSAMWEQPND 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++ +L + V L + V + L ++ + ++
Sbjct: 139 SENFVKGKLSDLLALGSTFVALALTIAVTAVGDEKTILRILGWMGLHDVAIPSVLLKVVT 198
Query: 185 TMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+A + LP + S + + I + + + + Y+
Sbjct: 199 IAIATVLSWALFTWMIARLPRERLPFSSSVRAGLIAAIGFELFKQVASIYLSVIMHGPAG 258
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
+ ++ +VF Y+ +
Sbjct: 259 -STFGPVLGIMVFAYITARLLLY 280
>gi|297192555|ref|ZP_06909953.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197718096|gb|EDY62004.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 307
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 88/264 (33%), Gaps = 11/264 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ I+ + L++FP I A + Q + + D + P
Sbjct: 23 WRSYETLDRVHWTRLAAAITFLSFLALFPLITVAAAIVAAALDQQALDKLDDKIAEQVPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY--RVVEMRSWY 129
I+D++ V G + A A G V ++R L + + +
Sbjct: 83 -----ISDQLDIQALVANAGTVGVVAGALLLLMGVGWVGSMRECLRAVWERDDEDEGNPV 137
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ ++ G + T + + + + + + L
Sbjct: 138 VRKVKDVGVLAGLGCTGLASFAASALGSMTVGRTADLLGLDEGGVGGVLVKAAAVAVGVL 197
Query: 190 --FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
F+ L++V LP + ++ + + + + +L YI ++ S MY
Sbjct: 198 ANFLILLYVLTLLPGVQPPRRRLVVAALIGAVGFELLKLLLGGYISGVASRS-MYGAFGV 256
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 257 PIALLLWINFTAKLLLFCAAWTAT 280
>gi|197286667|ref|YP_002152539.1| hypothetical protein PMI2838 [Proteus mirabilis HI4320]
gi|227355141|ref|ZP_03839552.1| ribonuclease [Proteus mirabilis ATCC 29906]
gi|194684154|emb|CAR45591.1| putative membrane protein [Proteus mirabilis HI4320]
gi|227164928|gb|EEI49775.1| ribonuclease [Proteus mirabilis ATCC 29906]
Length = 340
Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/270 (15%), Positives = 90/270 (33%), Gaps = 21/270 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + +I V +
Sbjct: 54 LIRAAERFTDRMGNQFGAAITYFSFLSLIPVLMLSFACAGFILASNPDLLAKLITGVANS 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + A Y N V LR ++ + + R +
Sbjct: 114 IDDPTLASTVQQSIDTAVRQRTTVGLTGLAIALYSGVNWVGNLRQAI-----LAQSRPIW 168
Query: 130 -----------ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-- 176
F ++ V LVI + A + G L
Sbjct: 169 ERNKEDQEKIYFRYFRDFLALIGLLVALVITITLTSVAGSAQKLIVHTLGLDGIEWLTPA 228
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ ++ A ++ +++ LP + K +S+L G + I + + + T + +
Sbjct: 229 WTTIGLTISISANYLLFLWILWILPRHQPKRISLLKGTLIAAIGFEILKSVMTWLLPRLA 288
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ S A S++ + F Y + A
Sbjct: 289 S-SPSGAAFGSVIGLMAFFYFFARLTLFCA 317
>gi|188996046|ref|YP_001930297.1| ribonuclease BN [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931113|gb|ACD65743.1| ribonuclease BN [Sulfurihydrogenibium sp. YO3AOP1]
Length = 302
Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 114/277 (41%), Gaps = 21/277 (7%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F I+Y +++ ++ + +S ++ L+++FP + F ++ + + + +++
Sbjct: 17 FKILYLSLKDYIANNYAYHSSALTFYFLMTIFPLLFFIISVISLIAIIN-ISEIYFILYK 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR--VVEMR 126
+P + + + A+ I+ L + +FS + A+ + + Y V E +
Sbjct: 76 IFPNSAESFLNTVLKLSQSQVAQKSIVITILLSIFFSKDLFVAISQAFSYIYEAKVAEGK 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAI--------------PLALAYVRKFFPALGN 172
I +++ +++ + + F+ + L + ++ F + N
Sbjct: 136 VILIISMLALPFLVTLILIFYVFLFIVKFLFSNIEKISSGVSKDILFIERIKNFLEFINN 195
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK----IMSILPGVIFTWISWVVGAVLF 228
L ++ + +L + + ++ F + K + +L IF I + + F
Sbjct: 196 KLGLLQIILNLSEILIFALIIWLIYYFFTPVQEKSKSFVKHVLTISIFISIIMFLLKIAF 255
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
T I+ F + + +Y + SI T ++++ + ++G
Sbjct: 256 TFLILNFLSTNPLYLTMGSIFTFIIWVKLCFDILLIG 292
>gi|218550794|ref|YP_002384585.1| hypothetical protein EFER_3505 [Escherichia fergusonii ATCC 35469]
gi|218358335|emb|CAQ90982.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia fergusonii ATCC 35469]
gi|325499076|gb|EGC96935.1| hypothetical protein ECD227_3173 [Escherichia fergusonii ECD227]
Length = 351
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 98/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + + +
Sbjct: 68 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPMLLQDIFNKILLN 127
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V R+
Sbjct: 128 ISDPALAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERTPQ 187
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 188 DQEKFWLKYLRDFISLIGLLIALIVTLSITSIAGSAQQLIINTLH-LNSIEWLKPTWRLI 246
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 247 GLAISIFANYLLFFWIFWRLPRHRPRRRALIRGTFIAAIGFEVIKIVMTYTLPSLMK-SP 305
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 306 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAQYKDDPRMP 346
>gi|325295450|ref|YP_004281964.1| ribonuclease BN [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065898|gb|ADY73905.1| ribonuclease BN [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 269
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 16/260 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
I ++ VE D A+ I+ L+S+ P +F FLG F +
Sbjct: 10 RSFLRYILYSLCDAVERDYPFYAASIAYYTLVSIIPLFIFLF----FLGMTVFQIDFESL 65
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + KPI +I QV+ + + +A+ +FS +L S V +
Sbjct: 66 IPKEFFNSPLKPIFLQIEQVM-NKSGLISGTAAIVMLWFSRGIFLSLEKSFCEILEVENL 124
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
++ L V+LA L I FVF +A + P L L ++
Sbjct: 125 AGFFYRNLA----VILAIFLLWIFMFVFYLAKYLIAALLPQIPILSILSSLL-------V 173
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ LF LI ++ FL K + I F ++ V +F +I S S +Y+
Sbjct: 174 PILLFAILISMYYFLLPIKIRFNFIFKISTFVFLLLTVFEKIFIWFIFNVSKVSILYSSF 233
Query: 246 ASIMTCLVFLYMLGVFFILG 265
A+I+ L+++Y + ++G
Sbjct: 234 AAIIIFLLWIYYSAIVILIG 253
>gi|307720260|ref|YP_003891400.1| ribonuclease BN [Sulfurimonas autotrophica DSM 16294]
gi|306978353|gb|ADN08388.1| ribonuclease BN [Sulfurimonas autotrophica DSM 16294]
Length = 274
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 101/281 (35%), Gaps = 12/281 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M E V I + FV+++ A+ +S + ++ P ++ + + ++
Sbjct: 1 MNEKLTTVIKQIKIFVSSFVDKELTLFAASLSFYTIFTIIPLLLIIMAILTSMPTFTEYY 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F V + + +I L +K + I +A S + NR
Sbjct: 61 EKIQGFIFSNLMPVNSDTVMFQINGFLQNSSK-MGAIGFIAILVSSLLFFKNFEYIANRI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + R+ + + + + L + L + ++ I +A N N
Sbjct: 120 FH-AKSRTLWESITTYWTLLTLTPIALGVSFYITGYIAALMA---------SNSFTSGLN 169
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ + AK + I + V F +Y+ +Y+
Sbjct: 170 ILPLVPYIIIWGLFFLIFQIAANAKINPKASAISSFIISIIFSVSKNAFIYYVFLNKSYT 229
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
TMY A +M +++Y+ + F+ G +L + Y +K+
Sbjct: 230 TMYGSFAILMFLFLWIYVSWIIFLYGLKLCHIIDEIYKKKQ 270
>gi|16762694|ref|NP_458311.1| hypothetical protein STY4195 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766894|ref|NP_462509.1| tRNA-processing ribonuclease [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29144181|ref|NP_807523.1| hypothetical protein t3909 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56415511|ref|YP_152586.1| hypothetical protein SPA3464 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161616663|ref|YP_001590628.1| hypothetical protein SPAB_04480 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167549168|ref|ZP_02342927.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167990829|ref|ZP_02571928.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168232440|ref|ZP_02657498.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168241767|ref|ZP_02666699.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168260658|ref|ZP_02682631.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168465106|ref|ZP_02698998.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194444749|ref|YP_002042856.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194447952|ref|YP_002047637.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194470601|ref|ZP_03076585.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197261677|ref|ZP_03161751.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197364437|ref|YP_002144074.1| hypothetical protein SSPA3235 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243309|ref|YP_002217568.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|207858846|ref|YP_002245497.1| hypothetical protein SEN3431 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213052822|ref|ZP_03345700.1| hypothetical protein Salmoneentericaenterica_07843 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213426511|ref|ZP_03359261.1| hypothetical protein SentesTyphi_13370 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213649449|ref|ZP_03379502.1| hypothetical protein SentesTy_20432 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|224585404|ref|YP_002639203.1| hypothetical protein SPC_3682 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238910364|ref|ZP_04654201.1| hypothetical protein SentesTe_04394 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|25355174|pir||AE0986 probable membrane protein STY4195 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16422170|gb|AAL22468.1| putative tRNA-processing ribonuclease [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16505000|emb|CAD08017.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139818|gb|AAO71383.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56129768|gb|AAV79274.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161366027|gb|ABX69795.1| hypothetical protein SPAB_04480 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403412|gb|ACF63634.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194406256|gb|ACF66475.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194456965|gb|EDX45804.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|195632377|gb|EDX50861.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197095914|emb|CAR61492.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197239932|gb|EDY22552.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197937825|gb|ACH75158.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205325864|gb|EDZ13703.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205330798|gb|EDZ17562.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333267|gb|EDZ20031.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205338828|gb|EDZ25592.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205350438|gb|EDZ37069.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|206710649|emb|CAR35007.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224469932|gb|ACN47762.1| hypothetical protein SPC_3682 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261248761|emb|CBG26611.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995845|gb|ACY90730.1| putative tRNA-processing ribonuclease [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160147|emb|CBW19667.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914632|dbj|BAJ38606.1| hypothetical protein STMDT12_C36630 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226659|gb|EFX51709.1| Inner membrane protein YhjD [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323131968|gb|ADX19398.1| putative tRNA-processing ribonuclease [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|326625350|gb|EGE31695.1| Ribonuclease BN-related domain containing protein [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
gi|332990459|gb|AEF09442.1| putative tRNA-processing ribonuclease [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 342
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + A Y N + LR ++ ++ V E +
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ + L+I + A + + ++ L
Sbjct: 179 DQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 239 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|200386637|ref|ZP_03213249.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|199603735|gb|EDZ02280.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
Length = 342
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + A Y N + LR ++ ++ V E +
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ + L+I + A + + ++ L
Sbjct: 179 DQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 239 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|284165650|ref|YP_003403929.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284015305|gb|ADB61256.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 261
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 79/238 (33%), Gaps = 24/238 (10%)
Query: 39 VFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAV--PAKGLFTI 96
P ++ L G ++ + G PE + + +
Sbjct: 38 FIPLLMLLFALVG--------ERLVTRIHGTTPEFLTPGAQRLVYEATTTATGRTWAVLF 89
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI 156
+ A+ S+N + R RV E L S + + + ++ V +
Sbjct: 90 AIGVLAWSSANVAVGFLAVVERIERVPERP------LGSQVRDAVVVLGSIGLAIVAIVG 143
Query: 157 PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIF 216
AL + P G +LAL + + ++ + + + LPG +
Sbjct: 144 TSALFPLPPDGPVAG-------LSGFVVLVLALTVAFLPMYYVPSRSATTPSAALPGALV 196
Query: 217 TWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T W + +Y Y +Y L+ ++ L LY+ V ++G +NA++
Sbjct: 197 TAFGWTLVHTGVHYYAANAGRY-AIYGVLSGVIIILTSLYLAAVLLMVGIVVNATLEA 253
>gi|197251814|ref|YP_002148536.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197215517|gb|ACH52914.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 342
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + A Y N + LR ++ ++ V E +
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ + L+I + A + + ++ L
Sbjct: 179 DQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 239 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|168235207|ref|ZP_02660265.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194736490|ref|YP_002116545.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|204928761|ref|ZP_03219960.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|194711992|gb|ACF91213.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291393|gb|EDY30745.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|204322194|gb|EDZ07392.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 342
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + A Y N + LR ++ ++ V E +
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ + L+I + A + + ++ L
Sbjct: 179 DQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 239 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|300782773|ref|YP_003763064.1| tRNA-processing ribonuclease BN [Amycolatopsis mediterranei U32]
gi|299792287|gb|ADJ42662.1| tRNA-processing ribonuclease BN [Amycolatopsis mediterranei U32]
Length = 336
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 7/261 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
D + A + F E G A+ I+ ++LSVFP + + G + + + D +
Sbjct: 20 LDHLIRANDAFTERYGNHYAAAITYFSVLSVFPLFMVAFAVVGLVVNHDKTIIMKITDGI 79
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ PE + + + L + L A Y + LR +L + +
Sbjct: 80 NNSVPEGLKDLVNGIVKGALDSGGG-IGIFGLLIALYSGIGWMSNLRDALTAQWGQEKQP 138
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + L+ +I+SF A+ + L + I R +
Sbjct: 139 QPLVKQTLKDLVALIGLGVALIVSFALTAVGGGVGQFLLELVGLEHATWAIVLLRGATIV 198
Query: 187 LAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L L + ++V LP + + S + G + + +V+ + + Y+ + + S A
Sbjct: 199 LGLAANTLVFLWVIARLPREQVALRSAVKGAVVAAVGFVILQQVGSLYLASVTK-SPSAA 257
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
++ LVF ++ F +L
Sbjct: 258 LFGPVIGLLVFANLVSRFLLL 278
>gi|324111849|gb|EGC05829.1| ribonuclease BN family protein [Escherichia fergusonii B253]
Length = 342
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 98/281 (34%), Gaps = 13/281 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPMLLQDIFNKILLN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS-- 127
+ + + + A Y N + LR ++ R V R+
Sbjct: 119 ISDPALAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERTPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+++ L F ++ + L++ + A + L ++ + R+
Sbjct: 179 DQEKFWLKYLRDFISLIGLLIALIVTLSITSIAGSAQQLIINTLH-LNSIEWLKPTWRLI 237
Query: 184 ATMLALF---IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++F + ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRRRALIRGTFIAAIGFEVIKIVMTYTLPSLMK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAQYKDDPRMP 337
>gi|271502558|ref|YP_003335584.1| ribonuclease [Dickeya dadantii Ech586]
gi|270346113|gb|ACZ78878.1| ribonuclease [Dickeya dadantii Ech586]
Length = 321
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 11/265 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + +
Sbjct: 41 LIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFATVGFVLASNPDLLTGLINRIVNS 100
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + L A Y N + LR ++ ++ V E +
Sbjct: 101 ISDPNLARTLKNTVNTAVRQRTTVGLTGLLIALYSGVNWIGNLREAIRAQSRDVWERQPH 160
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGR 181
Y+ L F ++ + L I F+ A A + + + L +
Sbjct: 161 EEEKLYLRYLWDFLSLIGLLLALGITLFLTSVAGSAQATIVRALGLGGIEWLRPAMTLIA 220
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ +++ LP + +L G + I + + T + +T S
Sbjct: 221 LSISIFANYLLFLWILWVLPRHNPRRTPLLRGTLMAAIGFEMLKFAMTVALPKLAT-SPS 279
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
A S++ + F Y + A
Sbjct: 280 GAAFGSVIGLMTFFYFFARLTLFCA 304
>gi|225849412|ref|YP_002729576.1| hypothetical protein SULAZ_1613 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643574|gb|ACN98624.1| putative membrane protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 299
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 107/278 (38%), Gaps = 14/278 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ F F + AI+ + ++ +S ++ LS+FP +F ++ F+ + +
Sbjct: 5 LNGIFIPFFISLILAIKDYFNKNYSYHSSSLAFYFFLSIFPMFIFVFSILSFIAFLK-IS 63
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +V+ +P + K + + + + L IS L + YF + A++++ + +
Sbjct: 64 DIYYIVYNLFPNIAEKFLENVLKFYNTNLSTNLSLISILLSLYFGKDLFIAIQMAFHYVW 123
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV-------------AIPLALAYVRKFF 167
+ + +A + V F+ + + L ++
Sbjct: 124 ELEYTTDRKKMIVSILALPFIAIIFTVFYLFMILLKFIDEVKNYLENFDVIFLKWLTNLI 183
Query: 168 PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
L + I N + ++ F+ + + F + ++ V+F + VL
Sbjct: 184 NFLAENVDTILNLLNISEIITFFVVIHLLFYFFTPVNVERKKLILVVLFVSFCLFMMRVL 243
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
F I+ F + + ++ + SI LV++ + ++G
Sbjct: 244 FESVIINFLSKNPLFLTVGSIFAFLVWVKLSFDIILIG 281
>gi|205354775|ref|YP_002228576.1| hypothetical protein SG3828 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205274556|emb|CAR39605.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629916|gb|EGE36259.1| putative tRNA processing ribonuclease BN [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
Length = 342
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + A Y N + LR ++ ++ V E +
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ + L+I + A + + ++ L
Sbjct: 179 DQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 239 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIASIGFEVIKIIMTYTLPSLVK-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|84497794|ref|ZP_00996591.1| hypothetical protein JNB_16943 [Janibacter sp. HTCC2649]
gi|84381294|gb|EAP97177.1| hypothetical protein JNB_16943 [Janibacter sp. HTCC2649]
Length = 340
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 85/258 (32%), Gaps = 19/258 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPE 72
I F ++ + I+ A LS FP ++ + F + ++D P
Sbjct: 23 VIYKFFDDQAGYLVGLIAYYAFLSFFPLLLIFTTVLSFVLVNYPDLKERMLDSALSEIPI 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE--MRSWYI 130
+ A+ Q L A G+ +S + A Y +A + ++N + V + +
Sbjct: 83 IGAQLGQP---QSLRGSATGVI-VSGVVALYGGLGVGQAFQYAMNTVWGVPRNVRPNPFR 138
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R SF +L + +V+ + + + A+ + + AT L
Sbjct: 139 ARGRSFLLLLTILLFVVLTTGITIVS----------AKAISSFPVTTQVAVAVATFLGTA 188
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG-AVLFTHYIVTFSTYSTMYAGLASIM 249
+ A + ++ G I ++W + S+ S ++
Sbjct: 189 LVFGLGMRRAVALDLGLKNVAVGAIGAALTWQALQSYGVGFVERAVSSTSATNGVFGLVI 248
Query: 250 TCLVFLYMLGVFFILGAE 267
F ++ + AE
Sbjct: 249 GLFAFFHLAAFGTVFFAE 266
>gi|322613999|gb|EFY10935.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322617891|gb|EFY14784.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625494|gb|EFY22320.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322629959|gb|EFY26732.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632152|gb|EFY28903.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322636498|gb|EFY33205.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322643132|gb|EFY39706.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322644647|gb|EFY41183.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322652755|gb|EFY49094.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659056|gb|EFY55308.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322663242|gb|EFY59446.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668728|gb|EFY64881.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322674468|gb|EFY70561.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322678325|gb|EFY74386.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322682417|gb|EFY78438.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684131|gb|EFY80137.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323192313|gb|EFZ77545.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323196259|gb|EFZ81411.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323201407|gb|EFZ86473.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323206483|gb|EFZ91444.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323212075|gb|EFZ96902.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323216980|gb|EGA01703.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323220345|gb|EGA04799.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323224393|gb|EGA08682.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323228322|gb|EGA12453.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323233411|gb|EGA17504.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323237128|gb|EGA21195.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243657|gb|EGA27673.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323246099|gb|EGA30086.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323250879|gb|EGA34757.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323257628|gb|EGA41314.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323261835|gb|EGA45402.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323266108|gb|EGA49599.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323268652|gb|EGA52119.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 342
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + A Y N + LR ++ ++ V E +
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ + L+I + A + + ++ L
Sbjct: 179 DQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 239 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|87121310|ref|ZP_01077200.1| tRNA processing ribonuclease BN [Marinomonas sp. MED121]
gi|86163467|gb|EAQ64742.1| tRNA processing ribonuclease BN [Marinomonas sp. MED121]
Length = 278
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 101/271 (37%), Gaps = 9/271 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAW 70
+ +I F + + ++L++LL+ P I + GF ++ ++
Sbjct: 13 LKISITLFKQANASLRVYQLTLASLLAAVPIITIIMGILGFTPTLKTMQANMVSLLEKHL 72
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
++ I ++ + AK L + + + + ++ +++ + R+
Sbjct: 73 APGSSEVILPYLIS-FSDHAKNLPILGIAILILTALLLLNSCEQAIQSIWQIKQCRN-LK 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL+++ +L L+ + A L L + + + + ++ + F
Sbjct: 131 ERLLTYWAMLTLGPILLGLGLSIYATLLTLKWQGI------EIAEFLGHLANLSSFILYF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L + P ++I + + +FT + F+ Y +Y A++ T
Sbjct: 185 LLLFTFNYLTPNTNTEIKLTALSTFIGTLILSISNYIFTSFAQLFANYQIIYGAFAALPT 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+++L + + A LNA++ K P
Sbjct: 245 LIIWLQISWSIVLASACLNAALHKQSLSKDP 275
>gi|330720319|gb|EGG98665.1| Ribonuclease BN [gamma proteobacterium IMCC2047]
Length = 239
Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 74/206 (35%), Gaps = 2/206 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +++ + E A + + LLS+ P + ++ G H +
Sbjct: 28 KVRMVRISRVLFAVLRDLKEGQLTLRAMSLVYTTLLSLVPLLAVSFSVLKAFGVHNQIEP 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + + + I V + L I Y + ++ + + N A+R
Sbjct: 88 LLQNLMTPLGPQGVEITNNIIGFVENMKVGVLGAIGVALLFYTVISLMQKIESAFNYAWR 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V ++R+ + + S ++ ++I S + V+ L + L +I
Sbjct: 148 VTQVRA--LHQRFSDYLSVVLIGPVLIFSAIGVSGTLMSNGFVVWLSGFEVLGWLIALLT 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKI 207
L + F+++F+P K K
Sbjct: 206 RLLPYLLIIAAFTFIYVFIPNTKVKW 231
>gi|297201893|ref|ZP_06919290.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197712734|gb|EDY56768.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 303
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 99/263 (37%), Gaps = 10/263 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ ++ ++ +++FP + A +A + + + + + P
Sbjct: 23 WRSYERLDRVKWTRLAAAMTFTSFVALFPLLTVAAAIAAATLSTKQQNDLQNKIADQVPG 82
Query: 73 VIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYI 130
I+D++ + L A + I+A A + N ++R L + + + + +
Sbjct: 83 -----ISDQLNIDDLVQNAGTVGLIAAAALLFTGINWAGSMRECLRAVWELPDDDENAVL 137
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATMLA 188
+ G +L +++ + + + +++ +LA
Sbjct: 138 RKGKDLGILLGLGGAVLVTLAISTVASALVDRIGGELGLQEGSAGRVLLRIAAFGIAVLA 197
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F+ L++V LP + + + + + + + +L + Y+ +T S MY
Sbjct: 198 DFLLLLYVLTLLPGVEPRRRRLFVAALTGAVGFELLKLLLSGYMQGVATKS-MYGAFGVP 256
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 257 VALLLWINFTAKLVLFCAAWTAT 279
>gi|168818571|ref|ZP_02830571.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205344490|gb|EDZ31254.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320088027|emb|CBY97789.1| Inner membrane protein yhjD [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 342
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + A Y N + LR ++ ++ V E +
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ + L+I + A + + ++ L
Sbjct: 179 DQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 239 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|71894114|ref|YP_278222.1| hypothetical protein MS53_0090 [Mycoplasma synoviae 53]
Length = 369
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 101/283 (35%), Gaps = 15/283 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI--------VFGANLAGFLGAHQFVPT 61
+I ++F ++ + + L+S P I V N+AG A
Sbjct: 76 KVINRIFDNFNTKEYNFIWLSTAFLILISFIPVIYIVYFFNSVLTPNIAGLTPADFEELF 135
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNR 118
+ ++ P + + S L A Y SS G L S N
Sbjct: 136 LSSILGKIIPGTDNTFLKLNARDIFNSADFSSIVGSFLLFVVAIYISSGGYARLITSSNY 195
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y ++ ++ R V + + L IMS + + I + + ++ + +LI
Sbjct: 196 IYDHKKLGTYIGNRFKGLFVVFMVAFWLWIMSTIQILIEIGIMNNKEIDSDISKGILI-- 253
Query: 179 NGRIYATMLALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
L F GL F ++ F+P+ SK +I G I I + + +F+ I S+
Sbjct: 254 QFTFGVNTLIFFFGLTFGIYKFVPSFTSKFKNIYRGAIIATIPSSIMSYIFSS-INQNSS 312
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y + + + +F+ F LG N + Y +K
Sbjct: 313 YGKFGSTVGFFLLVALFVNWFIYFVFLGFTFNEAYFKNYVARK 355
>gi|296273834|ref|YP_003656465.1| ribonuclease BN [Arcobacter nitrofigilis DSM 7299]
gi|296098008|gb|ADG93958.1| ribonuclease BN [Arcobacter nitrofigilis DSM 7299]
Length = 263
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 89/266 (33%), Gaps = 22/266 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M++ +F + + ++ F +D A+ +S + S+ P + L + +V
Sbjct: 1 MKKNSKKLFAKLIEILDSFFNDDTTYYAASLSFFTIFSILPIFALIIAIVSNLEQFNDYV 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
I+ + ++ E +A + L I + + + + +N+
Sbjct: 61 DLFINYILNLINPSHSQNFAQEFKNFIAN-SDKLGNIGIIYMLFVFTMFFKDYEYIVNKI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
++ + LL ++ + ++
Sbjct: 120 HKTKRKSIYASFFFYLLFITLLPAIFAGYIILTTFYNNTIFDFL---------------- 163
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
T++ + + + + L T + + LF +YI+ TY+
Sbjct: 164 ----LTLMLGWSIFFVLFKLTVNTHISVKAALISSFLTLVVISITKNLFIYYILYNQTYT 219
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
T+Y +A+++ +++Y + F+ G
Sbjct: 220 TLYGSMATLLFTFLWIYTSWIIFLYG 245
>gi|257460362|ref|ZP_05625463.1| ribonuclease BN [Campylobacter gracilis RM3268]
gi|257441693|gb|EEV16835.1| ribonuclease BN [Campylobacter gracilis RM3268]
Length = 277
Score = 63.7 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/266 (12%), Positives = 90/266 (33%), Gaps = 12/266 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPE 72
+ + AS +S +L++ P ++ ++ L + + ++ +F +
Sbjct: 16 KNFFRLYDTELMHHASSLSFHTILALLPVLMVSLSVFMQLPSFKGYYDKIMGFIFSNFLP 75
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ I + +A ++ A +S ++ RS++ +
Sbjct: 76 ANQASMAHYIEEFMANGLS--LGVTGFCAVLVTSVLFFGDFEAIIARISHSPERSFFKSL 133
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + LA V L ++ + L N L ++
Sbjct: 134 STYWTLMTLAPVGLGASFYISGELQELLN---------KTEFTSWINLLKILPYLIVWGI 184
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ + + ++L + I W + ++F Y+ TY ++Y + +
Sbjct: 185 FAITYATAINREIRAKAVLASSLVASILWWLSRLVFAQYVFYNKTYLSIYGSFSVALFFF 244
Query: 253 VFLYMLGVFFILGAELNASMIIYYWR 278
+++Y+ +F++ G + + + R
Sbjct: 245 LWIYISWIFYLYGVKFCVFLDAKFKR 270
>gi|144574959|gb|AAZ43511.2| conserved hypothetical protein [Mycoplasma synoviae 53]
Length = 372
Score = 63.3 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 101/283 (35%), Gaps = 15/283 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI--------VFGANLAGFLGAHQFVPT 61
+I ++F ++ + + L+S P I V N+AG A
Sbjct: 79 KVINRIFDNFNTKEYNFIWLSTAFLILISFIPVIYIVYFFNSVLTPNIAGLTPADFEELF 138
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNR 118
+ ++ P + + S L A Y SS G L S N
Sbjct: 139 LSSILGKIIPGTDNTFLKLNARDIFNSADFSSIVGSFLLFVVAIYISSGGYARLITSSNY 198
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y ++ ++ R V + + L IMS + + I + + ++ + +LI
Sbjct: 199 IYDHKKLGTYIGNRFKGLFVVFMVAFWLWIMSTIQILIEIGIMNNKEIDSDISKGILI-- 256
Query: 179 NGRIYATMLALFIGLIF-VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
L F GL F ++ F+P+ SK +I G I I + + +F+ I S+
Sbjct: 257 QFTFGVNTLIFFFGLTFGIYKFVPSFTSKFKNIYRGAIIATIPSSIMSYIFSS-INQNSS 315
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y + + + +F+ F LG N + Y +K
Sbjct: 316 YGKFGSTVGFFLLVALFVNWFIYFVFLGFTFNEAYFKNYVARK 358
>gi|317050450|ref|YP_004111566.1| ribonuclease BN [Desulfurispirillum indicum S5]
gi|316945534|gb|ADU65010.1| ribonuclease BN [Desulfurispirillum indicum S5]
Length = 280
Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 85/249 (34%), Gaps = 14/249 (5%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F + + A+ +S + + P ++ ++ L + + +
Sbjct: 26 FFDAELGYSAASLSFYTIFAFIPLLLIALSVTTRLPGFS---DQLADLREFLMGYLLPTN 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISF 136
D + + + A Y + + + + A R+ E RS++ + +
Sbjct: 83 VDAAAHFFESFLGDISRLGIMGALYVIATSILFFKNYQHIASRIFRSETRSFWESLTTYW 142
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+ L + L + + + LA N L + I A + I V
Sbjct: 143 TLMTLMPIGLALSLYFTTTAQVTLA---------RNPFLQGLDLAIVAPYAIAWAAFIIV 193
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
++ + + T ++W + LF Y V Y+T+Y + ++ L+++Y
Sbjct: 194 FRISANKPIQLKNAAISALVTSLAWNITKELFVAYAVINKAYTTIYGSFSILLLLLLWVY 253
Query: 257 MLGVFFILG 265
+ V + G
Sbjct: 254 VSWVIVLYG 262
>gi|294814594|ref|ZP_06773237.1| Putative membrane protein, ribonuclease BN-like family
[Streptomyces clavuligerus ATCC 27064]
gi|326442982|ref|ZP_08217716.1| ribonuclease BN family membrane protein [Streptomyces clavuligerus
ATCC 27064]
gi|294327193|gb|EFG08836.1| Putative membrane protein, ribonuclease BN-like family
[Streptomyces clavuligerus ATCC 27064]
Length = 328
Score = 63.3 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 93/264 (35%), Gaps = 11/264 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + +A+ I+ + L++FP + A +A L + + P
Sbjct: 19 WRSYLTLERAHWARLAAAITFLSFLALFPLLTVAAAVAAALIGADRAGRLEARISEQVPG 78
Query: 73 VIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWY 129
I+D++ L A + ++ + ++R L + + + ++
Sbjct: 79 -----ISDQLDFGSLVANAGTVGLVAGAFLLVTGIGWIGSMRDCLRAVWGLDDEDRGNFL 133
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL--GNLLLIIWNGRIYATML 187
+ + G +L T ++ A+ + + G +++ I ++
Sbjct: 134 LRKAKDTGVLLGLGATALVSLAASALGTSAVGWGAERLGVERGGAGGVLLAVAAIAIAVV 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ L+++ LP + +L + I + + +L + Y+ + S Y
Sbjct: 194 ADFLMLLYLLTLLPGVRPGRRPLLVAALLGAIGFELLKLLLSGYMQQVAAKSL-YGAFGV 252
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 253 PVALLLWINFTAKLLLYCAAWTAT 276
>gi|89898267|ref|YP_515377.1| tRNA-processing ribonuclease BN [Chlamydophila felis Fe/C-56]
gi|89331639|dbj|BAE81232.1| tRNA-processing ribonuclease BN [Chlamydophila felis Fe/C-56]
Length = 430
Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 90/252 (35%), Gaps = 5/252 (1%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + A +S L S P +VF L+ L + + V F + I +
Sbjct: 35 LLRNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFVNLDWKEWLLVKFPDYKGPILAIV 94
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMRSWYITRLIS-F 136
GL + + ++ + +L LN+ +R I RL+S
Sbjct: 95 EAAYRS--TTSNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWT-PISIQRLVSYL 151
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
L++ + +I+ ++ I + +L + + ++ L +++ L
Sbjct: 152 IITLVSPMIFIIVCGSWIYITQIMPVQYARLFSLSHSITALYVFSRLTPYLFIYLALFCF 211
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ FLP + + + W++ +F YS Y L ++ + L+ LY
Sbjct: 212 YAFLPRVSVQKTAAFISALTAGTLWIIFQKVFFCLQFYLFNYSFTYGALVALPSFLLLLY 271
Query: 257 MLGVFFILGAEL 268
+ + ++ G
Sbjct: 272 LYAMIYLFGGAF 283
>gi|62182112|ref|YP_218529.1| hypothetical protein SC3542 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62129745|gb|AAX67448.1| putative tRNA-processing ribonuclease [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322716600|gb|EFZ08171.1| Inner membrane protein yhjD [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 342
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/280 (14%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + A Y N + LR ++ ++ V E +
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY-VRKFFPALGNLLLIIWNGR- 181
++ L F ++ + L+I + A + + L W+
Sbjct: 179 DQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMSISALYLDSIEWLKPAWHLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 239 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPS 297
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|297626415|ref|YP_003688178.1| ribonuclease_BN [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922180|emb|CBL56748.1| Ribonuclease_BN [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 476
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 98/264 (37%), Gaps = 12/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ A + + G A I+ ++L+ P ++F + G L P ++D V G
Sbjct: 42 LWRANDRYNNRLGNQFAGGITYFSVLASVPVLMFAFSGLG-LTLTVIRPALLDDVKGIVV 100
Query: 72 EVIA-KPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYR-----V 122
+ P+ D +LQ L + + I+ + A + + + ++ ++ +R
Sbjct: 101 ANLYPGPMRDTVLQYLEQYLYHWQTVGLIAIVVALWAGAGWMGNVKSAIRAMWRPEFDMT 160
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFV--FVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ +++ ++ +L V + ++ + L ++
Sbjct: 161 EDKHFFFVEVAVNALLLLGLIVLVGVLLAANTVFTGWGSELLGLAHLGELRISAGLLRLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ A++L + I + LP S S+L G + + V + T F+ +
Sbjct: 221 SLSASLLGGWALFICMFRVLPQTHSSWRSVLRGSAVAAVLFWVMQAVATQLAGVFAHNRS 280
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
A+++ L+FL + +
Sbjct: 281 AALWGATLIVGLLFLNLFARLLLY 304
>gi|256394424|ref|YP_003115988.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256360650|gb|ACU74147.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 316
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/260 (13%), Positives = 86/260 (33%), Gaps = 17/260 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
++ + ++ A +S+FP ++ + G V+ +P
Sbjct: 30 VWRKLSDDQAGNLTGLLTFYAFVSLFPLLLLLVTVLGIALRHDPALQDWVLRSALADFP- 88
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SWYI 130
V+ + + L A GL I + + + A + LNR + V R +
Sbjct: 89 VLGDQLRGNVHA-LGRGATGLV-IGLVGSLLGARGLANAAQNVLNRLWAVPYNRRPGFPW 146
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ L S+ ++ + + + + V F G L + + + ++
Sbjct: 147 SWLRSYAFIAVVGIGMAATTLVADL---------SFGIGSGPLSIAVRVAALSGAVVIGT 197
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLASIM 249
+ A + + G + + W + +YI +++ Y ++
Sbjct: 198 LAYWLALRLAIAGEVAGRDLWTGAVIGAVGWQFLQGIGGYYITHQLRHASTLYGTFGLVL 257
Query: 250 TCLVFLYMLGVFFILGAELN 269
+ +LY+ + E++
Sbjct: 258 GLIAWLYLQARVTLYAVEVD 277
>gi|218461679|ref|ZP_03501770.1| putative ribonuclease protein [Rhizobium etli Kim 5]
Length = 88
Score = 62.9 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 44/57 (77%)
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
W+ GA++F +Y+ TF+ Y+ YAGLAS+M L+FLYM+G FI+GAE+NA++I +
Sbjct: 1 LWLAGALIFAYYLATFANYTATYAGLASVMIVLIFLYMVGAIFIIGAEINAALIKFR 57
>gi|256389866|ref|YP_003111430.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256356092|gb|ACU69589.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 294
Score = 62.5 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 83/255 (32%), Gaps = 17/255 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ + ++ A +S+FP ++ + G + Q V++ +P
Sbjct: 33 VFRELQVMKAGYLGAMLTFFAFISLFPLLLILTTVLGAVLRSNPQLQQDVLNSALVDFP- 91
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SWYI 130
VI + + + I + IS + + A + ++N + V E R +
Sbjct: 92 VIGEQLKNNIHDF--GRSGVALLISIIVTVIGALGLANAAQYAMNLLWGVPEDRRPGFPQ 149
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ L S G + + ++ + + A +V + G + A+ +
Sbjct: 150 SWLRSLGIIGTMGLGVLSTTVMTALGEWAGGHV---------FTAGLRAGLLAASFVLTA 200
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLASIM 249
+ A + + I T + W L +++ Y ++
Sbjct: 201 LLFWLGMRAATAPEVAARDLRLAAILTTLFWQGLQYLGGFIAAHQLRHASTLYGVFGLVL 260
Query: 250 TCLVFLYMLGVFFIL 264
L ++Y+ ++
Sbjct: 261 GLLAWIYLQARLTLV 275
>gi|15827290|ref|NP_301553.1| hypothetical protein ML0687 [Mycobacterium leprae TN]
gi|221229768|ref|YP_002503184.1| hypothetical protein MLBr_00687 [Mycobacterium leprae Br4923]
gi|467174|gb|AAA17332.1| u0308aa [Mycobacterium leprae]
gi|13092839|emb|CAC30196.1| putative membrane protein [Mycobacterium leprae]
gi|219932875|emb|CAR70781.1| putative membrane protein [Mycobacterium leprae Br4923]
Length = 313
Score = 62.2 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/272 (11%), Positives = 97/272 (35%), Gaps = 13/272 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + A + F E +G A+ ++ + ++FP ++ ++ G + + P ++ +
Sbjct: 20 LDHVVRAHQRFDERNGSFFAAGLTYYTIFALFPMLMVSFSVVGLVLFRR--PELLTTIDD 77
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG---VEALRISLNRAY--RVV 123
++ + E++ ++ ++ + A + G + R +L + + +
Sbjct: 78 HIRSAVSSQLGQELVDLMNRAIDARASVGVVGLATAAWAGLCWMSHFRAALTKMWWEHHI 137
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIWNG 180
+ S +L ++ V + + V A + + +I
Sbjct: 138 DPSSLLRNKLSDLLAMVGTFVVFLTTLALTVLSHQAPMAAILRCIGITHFFVFGVIFQGA 197
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + L ++ ++ +LP +++ + G + + + + + + Y+
Sbjct: 198 SVLVSTLVSWLLFTWMIAWLPRKSVNLVASMRGGLIAAVGFELFKQVGSIYLQIVLRSPA 257
Query: 241 MYAG-LASIMTCLVFLYMLGVFFILGAELNAS 271
++ +VF Y + A A+
Sbjct: 258 --GSVFGPVLGVMVFSYFTAYLVLFAASWAAT 287
>gi|319955901|ref|YP_004167164.1| ribonuclease bn [Nitratifractor salsuginis DSM 16511]
gi|319418305|gb|ADV45415.1| ribonuclease BN [Nitratifractor salsuginis DSM 16511]
Length = 270
Score = 61.8 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/259 (16%), Positives = 88/259 (33%), Gaps = 12/259 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVV 66
+ I + +E A+ +S S L + PF+V L + + +++
Sbjct: 10 YYLFIKGFFKELFDERLGFYAASMSWSTLFFIIPFMVILLVLFTHMPIFDTAYGRLHELI 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+K I I Q +A A L I + + +N + + R
Sbjct: 70 AENLVSSDSKTIMRYIDQFVAN-ADRLGYIGIGYVIIAAILFFKDYDFIVNDIFETPQ-R 127
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S F +L + L ++ I L V +
Sbjct: 128 SALKAFRTYFFLLLFLPIMLGSSFWLSRTIKGYLEAVG---------WAGTLHVYYIFPY 178
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +++ + F P + L + + W + F YI+ TY+++Y GL+
Sbjct: 179 LIIWLLFYVAYQFSPRIHISPRAALASSFISSLIWYLAKSGFLFYILYNKTYTSIYGGLS 238
Query: 247 SIMTCLVFLYMLGVFFILG 265
+++ +++Y+ F+ G
Sbjct: 239 TLLFFFLWIYISWAIFLYG 257
>gi|254432477|ref|ZP_05046180.1| YihY family protein [Cyanobium sp. PCC 7001]
gi|197626930|gb|EDY39489.1| YihY family protein [Cyanobium sp. PCC 7001]
Length = 328
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 95/280 (33%), Gaps = 25/280 (8%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ A++ + D +++ + A+ SVFP ++ +LA + + V+
Sbjct: 33 WRPLRVFLRALKLWFRHDCVDLSAAFAYHAMQSVFPIVLIALSLAARVLGQDEGLLDRVL 92
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
P +T + L + +SN L+ +R +
Sbjct: 93 SGARQVLPGSAMPAVTTGLNAFLRQGVGAGLLGVLVLVL-TASNAYLTLQRGADRLWW-- 149
Query: 124 EMRSW----------------YITRLISFGYVLLASVTL--VIMSFVFVAIPLALAYVRK 165
R + + ++ ++ + L + S+ P + +
Sbjct: 150 -NRPFGLDGLPWHQVVLRYCRLRLKALALMALMALVIVLDRLATSWRLPGAPTVGEVLPR 208
Query: 166 FFPALGNLLLIIWNGRIYATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
FP + +L +G T L + + + LP+ + + +LPG F ++ +
Sbjct: 209 IFPRVVDLGRPFNSGLDLLTTLGFSLLAALLLLWMLPSRRVSLRHLLPGAAFLAGAFTLL 268
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+L +V Y + ++ ++++M+GV
Sbjct: 269 NLLLGRVLVLLGVRFQAYGLVGGVLVFGLWVWMIGVLIYY 308
>gi|329942897|ref|ZP_08291676.1| ribonuclease BN-like family protein [Chlamydophila psittaci Cal10]
gi|332287490|ref|YP_004422391.1| putative inner membrane protein [Chlamydophila psittaci 6BC]
gi|313848069|emb|CBY17067.1| putative inner membrane protein [Chlamydophila psittaci RD1]
gi|325507308|gb|ADZ18946.1| putative inner membrane protein [Chlamydophila psittaci 6BC]
gi|328815157|gb|EGF85146.1| ribonuclease BN-like family protein [Chlamydophila psittaci Cal10]
gi|328914738|gb|AEB55571.1| ribonuclease BN, putative [Chlamydophila psittaci 6BC]
Length = 430
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/252 (17%), Positives = 92/252 (36%), Gaps = 5/252 (1%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + A +S L S P +VF L+ L A+ + V F + I +
Sbjct: 35 LLRNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFANLDWKEWLLVKFPDYKGPILAIV 94
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMRSWYITRLIS-F 136
GL + + ++ + +L LN+ +R I RLIS
Sbjct: 95 EAAYHS--TTSTIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWT-PISIQRLISYL 151
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
L++ + +I+ ++ I + +L + + ++ +++ L
Sbjct: 152 IITLVSPMIFIIVCGSWIYITQIMPVEYARLFSLSHSITALYVFSRLTPYFFIYLALFCC 211
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ FLP + + L + W++ +F V YS Y L ++ + L+ LY
Sbjct: 212 YAFLPRVAVQKTAALIASLTAGTIWIMFQKVFFCLQVYLFNYSFTYGALVALPSFLLLLY 271
Query: 257 MLGVFFILGAEL 268
+ + ++ G
Sbjct: 272 LYAMIYLFGGAF 283
>gi|62185159|ref|YP_219944.1| putative inner membrane protein [Chlamydophila abortus S26/3]
gi|62148226|emb|CAH63985.1| putative inner membrane protein [Chlamydophila abortus S26/3]
Length = 430
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 5/252 (1%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + A +S L S P +VF L+ L A+ + V F + I +
Sbjct: 35 LLRNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFANLDWKEWLLVKFPDYKGPILAIV 94
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMRSWYITRLIS-F 136
GL + + ++ + +L SLN+ +R I RLIS F
Sbjct: 95 EAAYHS--TTSNIGLVLVGSFFVFCWAGILMLLSLEDSLNKIFRTGWT-PISIQRLISYF 151
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
L++ + +I+ ++ I + +L + + ++ ++ L
Sbjct: 152 IITLVSPMIFIIVCGSWIYITQIMPVEYAKLFSLSHSITALYVFSRLTPYFFIYFALFCC 211
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ FLP + + L + W+ +F V YS Y L ++ + L+ LY
Sbjct: 212 YAFLPRVSVQKTAALVASLTAGTIWITFQKVFFCLQVYLFNYSFTYGALVALPSFLLLLY 271
Query: 257 MLGVFFILGAEL 268
+ + ++ G
Sbjct: 272 LYAMIYLFGGAF 283
>gi|302558858|ref|ZP_07311200.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
gi|302476476|gb|EFL39569.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length = 305
Score = 61.4 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 91/262 (34%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ ++ + +++FP + A + + T+ + P
Sbjct: 23 WRSYERLDRVHWTRLAAAMTFRSFVALFPLLTVAAAVGAATLSQDQQNTLQRKIADQVPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYI 130
+ + I ++ A + I+ + + A+R L + + E +
Sbjct: 83 ISDQL---NIGDLVEN-AGTIGLIAGAVLLFTGISWAGAMRECLRAVWELPDEEENPFLR 138
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL- 189
+ V L L+ ++ VA + G I+ + +A +
Sbjct: 139 KGKDAGILVGLGGAVLITLAASTVASAMVGRISDAIGLEKGGWGGIVLHVAAFAVAVGAD 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP + ++ + I + + +L + Y+ + S MY +
Sbjct: 199 FLLLLYVLTLLPGVEPARRRLIVAALTGAIGFELLKLLLSGYMQGVAAKS-MYGAFGVPV 257
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A+
Sbjct: 258 ALLLWINFTAKLVLFCAAWTAT 279
>gi|301166271|emb|CBW25846.1| putative tRNA-processing ribonuclease [Bacteriovorax marinus SJ]
Length = 330
Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/259 (19%), Positives = 93/259 (35%), Gaps = 15/259 (5%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-----QFVPTVIDVVFGAWPEV 73
F + +A + ALLS P ++ +L GFL V T ++ +
Sbjct: 37 FKKRKCEILAGATTFFALLSFCPAMLLSISLVGFLTGDIASAKGIVLTSLNENIPSLAPW 96
Query: 74 IAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I K I+ + Q+ + +F L Y + AL + + +
Sbjct: 97 IMKSISAIVDQQLHTTKSSNVFNTLFLG--YSLIGLISALMYGVRTIAGSRAKGGYLVED 154
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLAL--AYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L SF + S+ L F+FV+ L A L +L ++N ++ + ++
Sbjct: 155 LKSFMIGVCMSLFL---GFLFVSSNEVLFKAVFFSGPEKLPDLAKTVFNLQLLPILSSII 211
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYAGLASIM 249
F + F K + G +V+G Y+ + Y ++I+
Sbjct: 212 FFTGF-YKFSSGKKIALSHAFLGACSFVALFVLGKSGHWIYVKLSEQELAQNYGNFSTIV 270
Query: 250 TCLVFLYMLGVFFILGAEL 268
+V++Y L F GA L
Sbjct: 271 MAVVWVYYLVCSFFYGASL 289
>gi|315639085|ref|ZP_07894253.1| YihY family protein [Campylobacter upsaliensis JV21]
gi|315480861|gb|EFU71497.1| YihY family protein [Campylobacter upsaliensis JV21]
Length = 277
Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 94/258 (36%), Gaps = 15/258 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAW 70
I+ + +++ ++ +S ++LS+ P + ++ + + + V+F
Sbjct: 4 IFKLLLALRDKEILNYSASLSFYSILSLIPILFVCFSVFTQIPSFEAHYERAKSVIFTFL 63
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + L + L + +A A+ S +NR E + +
Sbjct: 64 IPAQQDLVASYLDTFLKN-SVNLGIMGLIAMAFTSLAFFSGYDFVINRI-TQNEPKGLWA 121
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ IS + LL V L + +V+ L + + +
Sbjct: 122 S--ISSYWTLLTLVPLGLGLSFYVS-SLIQKTLDDYHIGFNFFE---------ILPFVII 169
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L F+ + + ++ W G LF +Y+V TY+++Y ++I+
Sbjct: 170 WALFFISYSSSLHQVSLKNLALTSFCAGAIWYAGKNLFVYYVVYNKTYASVYGSFSTILF 229
Query: 251 CLVFLYMLGVFFILGAEL 268
+++Y+ V ++ G ++
Sbjct: 230 FFIWIYISWVIYLYGLKI 247
>gi|293363351|ref|ZP_06610173.1| ribonuclease BN-like family protein [Mycoplasma alligatoris A21JP2]
gi|292553020|gb|EFF41771.1| ribonuclease BN-like family protein [Mycoplasma alligatoris A21JP2]
Length = 356
Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 98/285 (34%), Gaps = 12/285 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ---- 57
++ + ++ A F + + + L+S P I+ + L
Sbjct: 68 KKNKAKLNAMVNRAYMKFSSREFTFIPAASGFYLLVSFVPIIIISYLILSLLSVASSGNI 127
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
F ID++ I I+ LQ+ A L++ + SS G + S N
Sbjct: 128 FNAYFIDIILPKMVPGIETVISFLTLQLRKTEAIISLVFLGLSSLWVSSAGYGKIISSQN 187
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + T L + L+ V + + + +A L L + + L
Sbjct: 188 YIYNHK----YLGTNLGNRLKGLILVVVISLYLSLLIAFTLGLDLLIGGYDVLDKTKNSS 243
Query: 178 WNGRIYA--TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ ++ L+ G + + F P+ K + GV+ I + LF +
Sbjct: 244 STFILFIFNALIFLYTGFLMLFKFSPSFKLSFRAAHSGVLVASIPTWLLVSLFGF-LAKV 302
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ ++ Y L M +F+ F LG +N + + ++
Sbjct: 303 TDFNK-YGPLGIFMYLSIFISWFTYFMYLGIIVNEAYFKTFVSQR 346
>gi|251791629|ref|YP_003006350.1| ribonuclease [Dickeya zeae Ech1591]
gi|247540250|gb|ACT08871.1| ribonuclease [Dickeya zeae Ech1591]
Length = 328
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 93/278 (33%), Gaps = 11/278 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A E F + G + I+ + LS+ P ++ AGF+ + +I+ + +
Sbjct: 46 RAGERFNDRMGNQFGAAITYFSFLSLIPILMVTFATAGFVLASNPDLLTGLINRIVNSIS 105
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS--- 127
+ + + L A Y N + LR +++ ++ V E +
Sbjct: 106 DPNLARTLKNTVNTAVRQRTTVGLTGLLIALYSGVNWIGNLREAIHAQSRDVWERKPHEE 165
Query: 128 --WYITRLISFGYVLLASV--TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
Y+ L F ++ + + + A + L ++ +
Sbjct: 166 EKLYLRYLWDFLSLIGLLLALVITLFLTSVAGSAQATIVRALGLGGIDWLRPVMTLIALS 225
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ A ++ +++ LP + +L G + I + T + +T S A
Sbjct: 226 ISIFANYLLFLWILWVLPRHNPRRTPLLRGTLMAAIGFEALKFAMTVALPKLAT-SPSGA 284
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S++ + F Y + A A+ KP
Sbjct: 285 AFGSVIGLMTFFYFFARLTLFCAAWIATADPKAETPKP 322
>gi|37524325|ref|NP_927669.1| hypothetical protein plu0308 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36783748|emb|CAE12603.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 330
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 92/279 (32%), Gaps = 21/279 (7%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A F + G + I+ + LS+ P ++ +AGF+ + +I+ + +
Sbjct: 55 RATLRFNDRMGNQFGAAITYFSFLSLIPILMLSFAIAGFILASNPDLLARLINSIANSIS 114
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS---- 127
+ + + A Y N V LR ++ + V +R+
Sbjct: 115 DPTLANTLKNSVDTAIKQRTTVGLTGLAIALYSGVNWVSNLRQAILAQFHPVWVRNQEDN 174
Query: 128 --WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
Y ++ + LVI + A A + K G I R
Sbjct: 175 EKIYFKYFRDSISLIGLLLALVITLSLTSIAGSAQATIVKMLGLDG-----IEWLRPSWF 229
Query: 186 MLALFIGLIFVH-------LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
++ L I + + LP + + ++L G + I + V + T + +
Sbjct: 230 LIGLAISISANYLLFLWLFWVLPRHQPERKALLKGTLMAAIGFEVIKYIMTMTLPRLAN- 288
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S A S++ + F Y+ + A A+ +
Sbjct: 289 SPSGAAFGSVIGLMTFFYLFARLTLFCAAWIATTDNNHK 327
>gi|57242516|ref|ZP_00370454.1| ribonuclease BN, putative [Campylobacter upsaliensis RM3195]
gi|57016801|gb|EAL53584.1| ribonuclease BN, putative [Campylobacter upsaliensis RM3195]
Length = 277
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/258 (14%), Positives = 94/258 (36%), Gaps = 15/258 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAW 70
++ + +++ ++ +S ++LS+ P + ++ + + + V+F
Sbjct: 4 VFKLLLALRDKEILNYSASLSFYSILSLIPILFVCFSVFTQIPSFEAHYERAKSVIFTFL 63
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + L + L + +A A+ S +NR E + +
Sbjct: 64 IPAQQDLVASYLDTFLKN-SVNLGIMGLIAMAFTSLAFFSGYDFVINRI-TQNEPKGLWA 121
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ IS + LL V L + +V+ L + + +
Sbjct: 122 S--ISSYWTLLTLVPLGLGLSFYVS-SLIQKTLDDYHIGFNFFE---------ILPFVII 169
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L F+ + + ++ W G LF +Y+V TY+++Y ++I+
Sbjct: 170 WALFFISYSSSLHQVSLKNLALTSFCAGAIWYAGKNLFVYYVVYNKTYTSVYGSFSTILF 229
Query: 251 CLVFLYMLGVFFILGAEL 268
+++Y+ V ++ G ++
Sbjct: 230 FFIWIYISWVIYLYGLKI 247
>gi|253987725|ref|YP_003039081.1| hypothetical protein PAU_00242 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779175|emb|CAQ82335.1| similar to putative membrane protein yhjd of escherichia coli
[Photorhabdus asymbiotica]
Length = 346
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 95/263 (36%), Gaps = 11/263 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A F + G + I+ + LS+ P ++ +AGF+ + +I+ + +
Sbjct: 70 RATLRFNDRMGNQFGAAITYFSFLSLIPILMLSFAIAGFILASNPDLLAKLINGIANSIS 129
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS---- 127
+ + + A Y N V LR ++ + V +R+
Sbjct: 130 DPTLANTLKNSVDTAIKQRTTVGLTGLAIALYSGVNWVSNLRQAILAQFHPVWLRNQEDE 189
Query: 128 --WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIY 183
Y + ++ + LVI + A A + + G L + +
Sbjct: 190 KKIYFKYIRDAISLIGLLLALVITLSLTSIAGSAQAIIVEILGLSGIEWLRPSWFLIGLA 249
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+++A ++ +++ LP + + ++L G + I + V + T + ++ S A
Sbjct: 250 ISIIANYLLFLWLFWVLPHHQPERKALLKGTLMAAIGFEVIKYIMTMTLPRLAS-SPSGA 308
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
S++ + F Y+ + A
Sbjct: 309 AFGSVIGLMTFFYLFARLTLFCA 331
>gi|295394814|ref|ZP_06805029.1| membrane protein [Brevibacterium mcbrellneri ATCC 49030]
gi|294972410|gb|EFG48270.1| membrane protein [Brevibacterium mcbrellneri ATCC 49030]
Length = 345
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 100/261 (38%), Gaps = 13/261 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF---LGAHQFVPTVIDVVFG 68
+ D + F G A+ I+ +L++ P ++F + GF + ++V V D +
Sbjct: 29 LKDTVTRFGARLGNQFAAAITYFLVLAIIPILMFAFAILGFTLDVLKPEWVGVVNDWITE 88
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM--- 125
P + + L + + L+A + + + L+ ++ RA +M
Sbjct: 89 TAPGQ--DELVAMLQNFLDNWQA-VGIVGVLSALFTAQGFIGNLKDAI-RAQLTDDMDDI 144
Query: 126 -RSWYITRLISFGYVLLASVTLVIMSF-VFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ ++ R + Y LL + LV ++ V + + + G ++ I
Sbjct: 145 PKEPFLARTFNNVYTLLGILVLVFLTLTATVLGTGLQSAIASWLDLPGWFAVVFNILTIA 204
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+ ++ +FV +P K + + G + ++ V L T I FS S A
Sbjct: 205 LTVAMNWLLFMFVFTTIPDKKIPMRTRAIGSLTGALALAVLLNLATVLISIFSG-SPTAA 263
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
I+ ++ + + ++
Sbjct: 264 LFGPIIAIMLSMNLFIRILLM 284
>gi|78776574|ref|YP_392889.1| ribonuclease BN [Sulfurimonas denitrificans DSM 1251]
gi|78497114|gb|ABB43654.1| tRNA-processing RNAse BN [Sulfurimonas denitrificans DSM 1251]
Length = 277
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 97/266 (36%), Gaps = 12/266 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
++ F +++ + + F+++D A+ +S + ++ P ++ L +
Sbjct: 4 IKGKFLKIYEYVKLFVTSFIDKDLTFYAASLSFYTIFTLIPLLLITLTLFTSMPNFADSY 63
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + +F V ++ + I L + + IS +A S + N+
Sbjct: 64 EKLQEFIFSNIMPVNSEAVMGHINGFLQN-SLEMSMISFVAVIISSLLFFQNFEYIANKI 122
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V R + + + + L + L ++ + +A N + N
Sbjct: 123 FHVK-KRGIWESITTFWTLLTLTPIGLGASFYITGYVASLMA---------ENEYIPNIN 172
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
Y L +++ + K + L T I + + F +YI +Y+
Sbjct: 173 ILPYIPYLIIWVLFFLIFQISANTKIDAKASLISSFITAIIFSIAKNGFIYYIFYNKSYA 232
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
TMY + +M +++Y + FI G
Sbjct: 233 TMYGSFSIVMILFLWIYASWIVFIYG 258
>gi|108563756|ref|YP_628072.1| putative ribonuclease N [Helicobacter pylori HPAG1]
gi|107837529|gb|ABF85398.1| putative ribonuclease N [Helicobacter pylori HPAG1]
Length = 292
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 106/280 (37%), Gaps = 30/280 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE+F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MREFFKSVRGFLRLLRMIFPERLKNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFS---- 105
+ ++F P++I I D + + L +S + A
Sbjct: 61 SHYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSIVVALVLFCENY 119
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ + + R Y + + ++ FG L+ L ++ F + I + +
Sbjct: 120 RSIASKIFDAKPRDYAHFKGKEIFL--FWGFGTTLVFLFALPLVVFFDIKIQV---FFED 174
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 175 KDSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLK 225
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 226 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|213850453|ref|ZP_03381351.1| hypothetical protein SentesT_02320 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 330
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 90/256 (35%), Gaps = 11/256 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + A Y N + LR ++ ++ V E +
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQ 178
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ + L+I + A + + ++ L
Sbjct: 179 DQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIG 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 239 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPS 297
Query: 242 YAGLASIMTCLVFLYM 257
A S++ + F Y
Sbjct: 298 GAAFGSVLGLMAFFYF 313
>gi|269114820|ref|YP_003302583.1| hypothetical protein MHO_0460 [Mycoplasma hominis]
gi|268322445|emb|CAX37180.1| Conserved hypothetical protein, putativeribonuclease [Mycoplasma
hominis ATCC 23114]
Length = 368
Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 90/276 (32%), Gaps = 17/276 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+I+ A E + + + ++ LS P + + G + ++ + +V+ G
Sbjct: 72 EIVNSAYEKINSNEFSFVPAGYAMYLFLSFIPISILMLGIIGSV-DEKYEVVLKNVILGQ 130
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
I++ I + + AL+ +S G S++ Y +
Sbjct: 131 IIPGISEVIPSFSTLWGSTGNAIALILFALSVLILASKGYSKFIFSIDALYEHKSPFRVW 190
Query: 130 ITRLISFGYVLL--------------ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+R+ F + V L+ + F L
Sbjct: 191 KSRIKGFIVSVFVCLILSLILLGLTAFMVFLIDKVGLGKFDADIKKMKLADFNLTTEFYL 250
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I W I + ++G +F ++ P K K+ PG + I + ++F
Sbjct: 251 IYWFTTILFLPVFTYLGFLFYFVYAPNFKLKMSQAHPGALIAAIPTAIFILIFGSLTSLI 310
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ +AS M ++ L F +G +N+S
Sbjct: 311 PY--KKFGIVASFMYIILLLSFTSYFIYMGIIVNSS 344
>gi|254386953|ref|ZP_05002235.1| hypothetical protein SSAG_06548 [Streptomyces sp. Mg1]
gi|194345780|gb|EDX26746.1| hypothetical protein SSAG_06548 [Streptomyces sp. Mg1]
Length = 359
Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 83/260 (31%), Gaps = 25/260 (9%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV--V 66
F +I A E V + + A+ ++ L+ P + A+ A Q V ++ + +
Sbjct: 92 FPVITHATERMVGVNIFDSATRLAAQCFLTAVPLLFVLASFAPDAVRMQLVDSIRAMFGL 151
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G ++ + L + A+ ++ A++ RA+ +
Sbjct: 152 TGQASSQLSDVLDGSAEDDL---RNAVGVTGAVIVLLSATAVSRAMQRLCRRAWEIPRTG 208
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + M + + P+ + + + L ++
Sbjct: 209 TRIAIWRW-------FAWIAAWMVLLIIQGPVRDGFGLGLWLGIPLTFLFQTAVWWWSQH 261
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS-TMYAGL 245
L L + + +LPG + T I+ ++ Y+ S Y
Sbjct: 262 LLLGGVI------------PWLPLLPGAVLTAIAITALSLGARVYMPIALNRSLAAYGST 309
Query: 246 ASIMTCLVFLYMLGVFFILG 265
S+ L +L +L V +G
Sbjct: 310 GSVFVILSWLIVLCVAVAIG 329
>gi|307128882|ref|YP_003880898.1| hypothetical protein Dda3937_02003 [Dickeya dadantii 3937]
gi|313104054|sp|P45417|Y2003_DICD3 RecName: Full=Uncharacterized protein Dda3937_02003; AltName:
Full=K1 ORF
gi|306526411|gb|ADM96341.1| conserved inner membrane protein [Dickeya dadantii 3937]
Length = 328
Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 89/263 (33%), Gaps = 11/263 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A + F + G + I+ + LS+ P ++ AGF+ + +I+ + +
Sbjct: 46 RAGDRFNDRMGNQFGAAITYFSFLSLIPILMVSFATAGFVLASNPDLLTGLINRIVNSIS 105
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS--- 127
+ + + L A Y N + LR +++ ++ V E +
Sbjct: 106 DPSLARTLKNTVNTAVRQRTTVGLTGLLIALYSGVNWIGNLREAIHAQSRDVWERQPHEE 165
Query: 128 --WYITRLISFGYVLLASV--TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
Y+ L F ++ + + + A + L ++ +
Sbjct: 166 EKIYLRYLWDFLSLIGLLLALVITLFLTSVAGSAQATIVRALGLNGIDWLRPVMTLIALS 225
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ A ++ +++ LP + +L G + I + T + +T S A
Sbjct: 226 ISIFANYLLFLWILWVLPRHNPRRGPLLRGTLMAAIGFEALKFAMTVALPELAT-SPSGA 284
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
S++ + F Y + A
Sbjct: 285 AFGSVIGLMTFFYFFARLTLFCA 307
>gi|89901196|ref|YP_523667.1| ribonuclease BN [Rhodoferax ferrireducens T118]
gi|89345933|gb|ABD70136.1| ribonuclease BN, putative [Rhodoferax ferrireducens T118]
Length = 301
Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 90/242 (37%), Gaps = 6/242 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVF-GANLAGFLGAHQFVPTVIDVVFGAWPE 72
++ F G +A ++ ALLS+ P ++ L+ F+ + T+ + P
Sbjct: 21 RTLKGFRANQGLLLAGAVAYYALLSIVPMLILTVIALSHFVDQAALLQTLGRYLEWLVPG 80
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMRSWY 129
I + +L L + ++ +FSS L +++ + R +
Sbjct: 81 QSGVIIAELANFLL--HRDVLSWVLLVSMLFFSSLAFTVLENAMSVIFHHRVAIRRRHFL 138
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I+ +I + Y+L + L++++ V ++ +F +L + +
Sbjct: 139 ISAVIPYAYILSLGLGLLLVTLVAGSLQAIGQERVEFLWRSWSLGGVSGALLYLLGLAGE 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L V+L +P + + L G + + W + Y T S T+Y L + +
Sbjct: 199 IFVLTSVYLVMPVGRPSLFHALLGAVAAALMWELSRHALVWYFTTLSQIGTVYGSLTTAI 258
Query: 250 TC 251
Sbjct: 259 AV 260
>gi|118475249|ref|YP_891867.1| ribonuclease BN [Campylobacter fetus subsp. fetus 82-40]
gi|118414475|gb|ABK82895.1| ribonuclease BN [Campylobacter fetus subsp. fetus 82-40]
Length = 266
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 102/275 (37%), Gaps = 14/275 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVID 64
+++ + + ++ A+ +S LLS+ P + ++ L + + + D
Sbjct: 2 RKIWEKLVLIYKVLEDKQLLHFAASLSFHTLLSIIPVLFISLSIFTQLPSFSGYYAKIKD 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+F + IT+ I Q L+ + I L A +F+S + + +
Sbjct: 62 FIFSNLLPS--QSITEYIDQFLSNSSS--LGIIGLIAVFFTSIMFFSDYEFVISKLTGAK 117
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ + + + L + L + ++ I L+ + N
Sbjct: 118 SRGFWRSLSNYWTLITLMPLGLGMSFWLSNLIQTMLS---------QSEYTSGINFLAIF 168
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ ++ +L I +IL + ++W + +F Y TYS++Y
Sbjct: 169 PYIIIWAIFAVTYLISINRDFSIKNILISSFASSLAWSISKWIFVGYSFYNKTYSSIYGS 228
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++ +++Y+ + F+ G +L ++ K
Sbjct: 229 FSILLFFFIWIYISWIIFLYGIKLCVALDGLSRDK 263
>gi|305431753|ref|ZP_07400920.1| YihY family protein [Campylobacter coli JV20]
gi|304444837|gb|EFM37483.1| YihY family protein [Campylobacter coli JV20]
Length = 268
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 95/257 (36%), Gaps = 13/257 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I+ + + +++ A+ +S +LS+ P + ++ + + + + A+
Sbjct: 4 IFAILSNLRDKEILNYAAALSFYTILSLIPILFVCFSVFTQISSFKAYYEKAKQIIFAFL 63
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I L + L + +A + S +NR E + + +
Sbjct: 64 IPAQQDIVAAYLDTFLNNSVNLGIVGLIAMTFTSLAFFSGYDFVINRI-TKSEPKGLWQS 122
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + L + L + ++ I AL + F +
Sbjct: 123 ISSYWTLLTLVPLGLGLSFYISGLIQKALDDYKIGFNFFE------------ILPFVIIW 170
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
GL F+ K + S++ W +G LF +YIV TY+++Y ++I+
Sbjct: 171 GLFFISYSSSIQKGTLKSLIFVSFAAGAIWYIGKNLFVYYIVYNKTYASVYGSFSTILFF 230
Query: 252 LVFLYMLGVFFILGAEL 268
+++Y+ + ++ G ++
Sbjct: 231 FIWIYISWIVYLFGIKI 247
>gi|291277438|ref|YP_003517210.1| putative ribonuclease BN [Helicobacter mustelae 12198]
gi|290964632|emb|CBG40486.1| putative ribonuclease BN [Helicobacter mustelae 12198]
Length = 277
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/246 (10%), Positives = 85/246 (34%), Gaps = 14/246 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVVFGAWPEVIAKPIT 79
E++ + A+ +S + ++ P + ++ L + Q+ + V +V+F + + +
Sbjct: 22 EQEIFYYAASLSFYTIFAIIPLLFIIFSILSHLPSFQYRLEDVRNVIFSYIIPIDSDILN 81
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + + K + + + + S +R + + R + ++ + +
Sbjct: 82 NMLNDFMINAPK-MGMVGFVYIIFTSLFFFRNYEFITSRMFN-SKPRKILDSLMVHWLLI 139
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
+ ++I Y R ++ +I+ A + + + +
Sbjct: 140 TFFPIMIMIFF-----------YGRHELKSILTNPFLIFLSIKIAPWIVNCLFFMMLFQI 188
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
++ W F +Y+ Y ++Y ++ + ++++Y+
Sbjct: 189 SANKTLNKKILIFSSFLCASMWQFFKWAFFYYVTYNKAYPSLYGSISILPIFMLWIYISW 248
Query: 260 VFFILG 265
+ G
Sbjct: 249 TILLFG 254
>gi|220911969|ref|YP_002487278.1| ribonuclease BN [Arthrobacter chlorophenolicus A6]
gi|219858847|gb|ACL39189.1| ribonuclease BN [Arthrobacter chlorophenolicus A6]
Length = 324
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 98/264 (37%), Gaps = 13/264 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
H+ + G M++ I + S+ + G ++AG + G + +++ V +
Sbjct: 34 MRVFRHYSLQHGPLMSAGIGFNMFFSITGLLATGFSVAGLVLRGQPALLDSIVSSVAASA 93
Query: 71 P-----EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRVVE 124
P + + + +L GL I A +S G + LR L +
Sbjct: 94 PGLLKVDGGTGLVDPQ--DMLNPQGLGLTAIIAAIVTIITSLGWINGLRDGLRGVMELPP 151
Query: 125 MR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ + + +L G +LL V LVI + + A +V + +
Sbjct: 152 LVVNPVVLKLRDAGTLLLLGVALVISAGASLIFGTAAGWVSDVLHLDDAVAGPLTTLIKI 211
Query: 184 ATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A L L ++ + + K ++L G I I V +F+ ++ + + +
Sbjct: 212 AVPLVLSWVTALIMFRLAGGLKLSRRALLEGTILAAIGTTVL-QVFSTELLGGAGRNPIL 270
Query: 243 AGLASIMTCLVFLYMLGVFFILGA 266
A A I+ L++ + +++ A
Sbjct: 271 APFAIIIGLLIWFNFVSQVYLVSA 294
>gi|148241463|ref|YP_001226620.1| ribonuclease BN-like family protein [Synechococcus sp. RCC307]
gi|147849773|emb|CAK27267.1| Ribonuclease BN-like family protein [Synechococcus sp. RCC307]
Length = 310
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 80/247 (32%), Gaps = 20/247 (8%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGAWPEVIAKP 77
+++ + +L S FPF++ + F ++ V G P +
Sbjct: 19 NRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGASDQLLAVAAGVLPPGGLEV 78
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR-------------AYRVVE 124
+ + +++ I L + +SN +L+ +R A+
Sbjct: 79 MEGILQRLVNQGQVAE-QIGGLVLIFSASNATLSLQRGADRLWYGLALPNAGDQAWHWHL 137
Query: 125 MRSWYITRLISFGYVLLASVTLV--IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R ++ +LLA V L+ I + + + + P L + I
Sbjct: 138 RRWFFQRLKAIGAALLLALVLLINQITTPFRLLWSSMWSSLGSLSPWLPQPWEVPARTLI 197
Query: 183 YA--TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L + I + + +LP+ + ++ + G + + L +V +
Sbjct: 198 SVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTLVNPLLGRALVWAGSRFL 257
Query: 241 MYAGLAS 247
Y +
Sbjct: 258 AYGLVGG 264
>gi|282860934|ref|ZP_06270000.1| ribonuclease BN [Streptomyces sp. ACTE]
gi|282564670|gb|EFB70206.1| ribonuclease BN [Streptomyces sp. ACTE]
Length = 306
Score = 60.2 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 92/263 (34%), Gaps = 9/263 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E V +A+ I+ + L++FP I GA + L + + + + P
Sbjct: 23 WRSYETLVRVHWARLAAAITFLSFLALFPLIAVGAAVGAALLTDKQLNKIEKQLAEQVPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEMRSWYI 130
+ + D ++ + + + ++R L + + + +
Sbjct: 83 ISDQLGIDNLVAHAGTVGLVAGLLLLFTGVGW----IGSMRECLRAVWEKDDADQGNPVV 138
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNGRIYATMLA 188
+L G ++ + V A+ + P G +++ + + A
Sbjct: 139 RKLKDAGLLIGLGGAALATVAVSTIGSTAIGWTADQLGIPEDGAGGVLLRVAALVVAVGA 198
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F+ L+++ LP + + + + + + +L Y+ ++ S MY
Sbjct: 199 DFLLLLYLLTLLPGVEPPRHRLFVAGLVGAVGFELLKLLLGSYMKGVASKS-MYGAFGVP 257
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L+++ ++ A A+
Sbjct: 258 IALLLWINFSAKLLLVCAAWTAT 280
>gi|211638603|emb|CAR67222.1| similar to putative membrane protein yhjd of escherichia coli
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
Length = 341
Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 95/263 (36%), Gaps = 11/263 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A F + G + I+ + LS+ P ++ +AGF+ + +I+ + +
Sbjct: 70 RATLRFNDRMGNQFGAAITYFSFLSLIPILMLSFAIAGFILASNPDLLAKLINGIANSIS 129
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS---- 127
+ + + A Y N V LR ++ + V +R+
Sbjct: 130 DPTLANTLKNSVDTAIKQRTTVGLTGLAIALYSGVNWVSNLRQAILAQFHPVWLRNQEDE 189
Query: 128 --WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIY 183
Y + ++ + LVI + A A + + G L + +
Sbjct: 190 KKIYFKYIRDAISLIGLLLALVITLSLTSIAGSAQAIIVEILGLSGIEWLRPSWFLIGLA 249
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+++A ++ +++ LP + + ++L G + I + V + T + ++ S A
Sbjct: 250 ISIIANYLLFLWLFWVLPHHQPERKALLKGTLMAAIGFEVIKYIMTMTLPRLAS-SPSGA 308
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
S++ + F Y+ + A
Sbjct: 309 AFGSVIGLMTFFYLFARLTLFCA 331
>gi|57168097|ref|ZP_00367236.1| ribonuclease BN, putative [Campylobacter coli RM2228]
gi|57020471|gb|EAL57140.1| ribonuclease BN, putative [Campylobacter coli RM2228]
Length = 268
Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 95/257 (36%), Gaps = 13/257 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I+ + + +++ A+ +S +LS+ P + ++ + + + + A+
Sbjct: 4 IFAILSNLRDKEILNYAAALSFYTILSLIPILFVCFSVFTQISSFKAYYEKAKQIIFAFL 63
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I L + L + +A + S +NR E + + +
Sbjct: 64 IPAQQDIVAAYLDTFLNNSVNLGIVGLIAMTFTSLAFFSGYDFVINRI-TKSEPKGLWQS 122
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + L + L + ++ I AL + F +
Sbjct: 123 ISSYWTLLTLVPLGLGLSFYISGLIQQALDGYKIGFNFFE------------ILPFVIIW 170
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
GL F+ K + S++ W +G LF +YIV TY+++Y ++I+
Sbjct: 171 GLFFISYSSSIQKGTLKSLIFVSFAAGAIWYIGKNLFVYYIVYNKTYASVYGSFSTILFF 230
Query: 252 LVFLYMLGVFFILGAEL 268
+++Y+ + ++ G ++
Sbjct: 231 FIWIYISWIVYLFGIKI 247
>gi|297158128|gb|ADI07840.1| putative integral membrane protein [Streptomyces bingchenggensis
BCW-1]
Length = 298
Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 96/271 (35%), Gaps = 8/271 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ Y + E +A+ I+ + L+ FP I A + + + +
Sbjct: 14 IVRLMRSHAYRSYETLERVHWTRLAAAITFISFLAFFPLIAVAAAIGAATLSADQMRQLE 73
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + + +++ A + ++ + + V +LR L + +
Sbjct: 74 KKLAQQVPGISGQLDLSGLIE----NAATIGIVAGVLLLFTGIGWVGSLRECLRAVWELE 129
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVF-VAIPLALAYVRKFF--PALGNLLLIIWNG 180
E + R + VL + + SF A+ + + P G ++
Sbjct: 130 EDPGNAVKRKLKDAVVLFGLGGVALASFAVSGFAVTAVGWTARHLGIPENGPGGSLLRVA 189
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A ++A F+ L +V +LP + S++ + + + +L + Y+ + S
Sbjct: 190 AFAAAVVADFVLLCYVLTWLPGVRPPRRSVVVAALIGAVGLELLKLLLSSYLQKVAAKS- 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
MY + L+++ + A A+
Sbjct: 249 MYGAFGVPIALLLWINFTAKLTLYCAAWTAT 279
>gi|311894391|dbj|BAJ26799.1| putative ribonuclease [Kitasatospora setae KM-6054]
Length = 341
Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 96/271 (35%), Gaps = 22/271 (8%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
++ + ++ G +A+ I+ +S+ P ++ + GF+ G + V+D +P
Sbjct: 27 VVKKYGDDRGGLLAALITYYGFVSLVPLLLLLSTALGFVLHGHPEAQRAVLDSALADFP- 85
Query: 73 VIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVE-MRSWY 129
I D++ V +V GL + +A + + G+ + L+ ++ + V R Y
Sbjct: 86 ----IIGDQLRGNVHSVRGSGLALVVGVAGLLYGALGIAQVLQHAMAEVWNVPGVRRPGY 141
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+RL + L L+ G + + +
Sbjct: 142 WSRLGRSLALFGVL-----------GGGLLLSTAAAALVGAALGGPAARVGGLLLSAVLN 190
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASI 248
+ + L + ++LPG + + V + + +Y A++
Sbjct: 191 SLLFLACLRILTPKEVAARALLPGSLLAGPLFTVLQAFGAVLVAHQLRHATAVYGFFATV 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L +LY+ + AE N + W +
Sbjct: 251 IGLLSWLYLAAQVTVYAAESNTVLARRLWPR 281
>gi|268680213|ref|YP_003304644.1| ribonuclease BN [Sulfurospirillum deleyianum DSM 6946]
gi|268618244|gb|ACZ12609.1| ribonuclease BN [Sulfurospirillum deleyianum DSM 6946]
Length = 273
Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 87/253 (34%), Gaps = 12/253 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPE 72
+ + + + AS +S +LS+ P ++ +L L + + + +F +
Sbjct: 9 EFFKKLRDVELAHYASSLSFHTILSLIPILLITFSLFTKLPLFEIYYEKLQSFIFSSLIP 68
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + +A + + + Y S +++ + RS++
Sbjct: 69 TQQDIMIHYLHDFIAN-TGNMGVVGLIFVLYISIMFFLDYEKIVSKIFETK-TRSFWEAL 126
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ V L + L+I + I L + N + +++
Sbjct: 127 ATYWTMVTLMPLGLIIFFYSSATIQTFLEQTP---------VTSTINFVQFTPYFIIWLL 177
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ K + S L + W + LF Y+ TY ++Y + ++
Sbjct: 178 FLIMYSVSAKIKIHLKSALLSSFIASLFWYISKNLFVFYVAYNKTYLSIYGSFSILLFFF 237
Query: 253 VFLYMLGVFFILG 265
+++Y+ ++ G
Sbjct: 238 LWIYLSWFIYLYG 250
>gi|302538623|ref|ZP_07290965.1| predicted protein [Streptomyces sp. C]
gi|302447518|gb|EFL19334.1| predicted protein [Streptomyces sp. C]
Length = 363
Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 86/258 (33%), Gaps = 22/258 (8%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F +I E + + + A+ ++ LL+V P + A+LA Q ++ +
Sbjct: 98 FPVITHLAERMIAVNIFDSATRVAAQVLLTVVPLLFVVASLAPRALQEQLTSSLRALFG- 156
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + + ++ ++ A++ RA+ +
Sbjct: 157 -LTGESGEQLDEFFAGTDEDVQNAVGVVGSVMVLLSATAVSRAVQRLCKRAWGIPRG--- 212
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R+ + +V+ +V + V P+ + + + LL+ + L
Sbjct: 213 -AARIAVWRWVVWIAVW---TGLLVVQGPVRDGFGTGLWLGVPLTLLLQTAAWWWTQHLL 268
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLAS 247
L + +LPG + + ++ ++ Y+ + S
Sbjct: 269 LGGAVG------------WWPLLPGALLSAVAVTALSLGARLYMPLALNRVLGEFGAFGS 316
Query: 248 IMTCLVFLYMLGVFFILG 265
+ L +L +L V +G
Sbjct: 317 VFVLLSWLIVLCVAIAIG 334
>gi|317013172|gb|ADU83780.1| putative ribonuclease N [Helicobacter pylori Lithuania75]
Length = 292
Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 105/280 (37%), Gaps = 30/280 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVE---------EDGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE+F V + F + + + AS +S +LS+ P ++F +L
Sbjct: 1 MREFFKSVRGFLCLLRMIFPKCLQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFS---- 105
+ ++F P++I I D + + L +S + A
Sbjct: 61 SHYLQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSIVVALVLFCENY 119
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ + + R Y + + ++ FG L+ L ++ F + I + +
Sbjct: 120 RSIASKIFDAKPRDYAHFKGKEIFL--FWGFGTTLVFLFALPLVVFFDIKIQV---FFED 174
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
L ++L I + + + +F H F + V FT +SW V
Sbjct: 175 KDSNLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLK 225
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 226 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|298737047|ref|YP_003729577.1| hypothetical protein HPB8_1556 [Helicobacter pylori B8]
gi|298356241|emb|CBI67113.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 292
Score = 59.9 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 103/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE+F V + F + + + AS +S +LS+ P ++F +L
Sbjct: 1 MREFFKSVRGFLRLLRMIFPKRLKNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S L A
Sbjct: 61 SHYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 DSNLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|254779925|ref|YP_003058031.1| Ribonuclease N; putative membrane protein [Helicobacter pylori B38]
gi|254001837|emb|CAX30080.1| Ribonuclease N; putative membrane protein [Helicobacter pylori B38]
Length = 292
Score = 59.5 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 104/280 (37%), Gaps = 30/280 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFLRLLRMIFPERLKNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFS---- 105
+ ++F P++I I D + + L +S + A
Sbjct: 61 SHYLQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSIVVALVLFCENY 119
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ + + R Y + + ++ FG L+ L ++ F + I + +
Sbjct: 120 RSIASKIFDAKPRDYAHFKGKEIFL--FWGFGTTLVFLFALPLVVFFDIKIQV---FFED 174
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
L ++L I + + + +F H F + V FT +SW V
Sbjct: 175 KDSNLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLK 225
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 226 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|290958014|ref|YP_003489196.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260647540|emb|CBG70645.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 289
Score = 59.5 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 86/262 (32%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ ++ + L++FP + A +A + D + P
Sbjct: 23 WRSYERLDRVKWTRLAAAMTFISFLALFPLLTVVAAIAAATLGKDRQQDLEDRLAEQVPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE-MRSWYIT 131
+ + +++ A + I+ + V +R L + + + +
Sbjct: 83 ISDQLDIAGLVE----NAGTVGIIAGALLLFTGIGWVGEMRGCLRAVWEKPDADENPVLA 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-- 189
+ G ++ +++ A A+ + I + L
Sbjct: 139 KAKDTGVLVGLGGAVLVSLAASTAASWAVGRFADELGIDRDGWGGILLRVAAFAVAVLAD 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP ++ + + + + +L + Y+ ++ S MY +
Sbjct: 199 FLLLLYVLTLLPGVHPPRRRLVVAALIGAVGFELLKLLLSGYMQGIASKS-MYGAFGVPI 257
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A
Sbjct: 258 ALLLWINFTTKLLLYCAAWTAE 279
>gi|317178107|dbj|BAJ55896.1| putative ribonuclease N [Helicobacter pylori F16]
Length = 292
Score = 59.5 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 103/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE+F V + F + + + AS +S +LS+ P ++F +L
Sbjct: 1 MREFFKSVRGFLRLLRMIFPKHFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S L A
Sbjct: 61 SSYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDIALGTLEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 NSNLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|210135569|ref|YP_002302008.1| ribonuclease N [Helicobacter pylori P12]
gi|210133537|gb|ACJ08528.1| ribonuclease N [Helicobacter pylori P12]
Length = 292
Score = 59.5 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 52/280 (18%), Positives = 104/280 (37%), Gaps = 30/280 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFLRLLRMIFPERLKNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFS---- 105
+ ++F P++I I D + V L +S + A
Sbjct: 61 SHYLQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDVTLGTLEEVSIVVALVLFCENY 119
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ + + R Y + + ++ FG L+ L ++ F + I + +
Sbjct: 120 RSIASKIFDAKPRDYAHFKGKEIFL--FWGFGTTLVFLFALPLVVFFDIKIQV---FFED 174
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
L ++L I + + + +F H F + V FT +SW V
Sbjct: 175 KDSRLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLK 225
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 226 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|308183498|ref|YP_003927625.1| putative ribonuclease N [Helicobacter pylori PeCan4]
gi|308065683|gb|ADO07575.1| putative ribonuclease N [Helicobacter pylori PeCan4]
Length = 292
Score = 59.5 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 105/280 (37%), Gaps = 30/280 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVE---------EDGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFLRLLRMIFPECFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFS---- 105
+ ++F P++I I D + + L +S + A
Sbjct: 61 SHYLQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSIVVALVLFCENY 119
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ + + R Y + + ++ FG L+ L ++ F + I + +
Sbjct: 120 RSIASKIFDAKPRDYAHFKGKEIFL--FWGFGTTLVFLFALPLVVFFDIKIQV---FFED 174
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 175 KDSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLK 225
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 226 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|213422646|ref|ZP_03355708.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 97
Score = 59.5 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 38/93 (40%)
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+I N +L +I ++ +P + L G + + G F YI F
Sbjct: 3 VIDNVLRILPLLLSWISFWLLYSIVPTTRVPNRDALVGAFVAALLFEAGKKGFALYITMF 62
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y +Y LA I V++Y +LGAE+
Sbjct: 63 PSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEI 95
>gi|310286718|ref|YP_003937976.1| Ribonuclease BN-like family [Bifidobacterium bifidum S17]
gi|309250654|gb|ADO52402.1| Ribonuclease BN-like family [Bifidobacterium bifidum S17]
Length = 319
Score = 59.5 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/269 (12%), Positives = 99/269 (36%), Gaps = 8/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
+I I+ +V G +A+ ++ L + F + + G + G+ + ++ ++
Sbjct: 42 RSLIGRVIDRYVSRRGPLLANGLAYGLLFAFFAGVWIVVSALGLVVTGSEEMQKALLAML 101
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEM 125
P V + +L ++ ++ + + + +LR ++ + +
Sbjct: 102 RTVIPSVSDSLFSASMLSGISHTLTWTGLVTLAVFWWTVTGWMNSLRNAVTTMFDDCTQE 161
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIWNGRI 182
+ RL ++ +V ++ + V + V + + L L++ +
Sbjct: 162 LNVVKARLRDTVAAIMVAVLFILSTAAGVVSGGLMRLVLRALGIADDSLPGALLLESTGF 221
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L F + + + ++ +++ V L ++T ++ + M
Sbjct: 222 ATGVLLNFALFMLLLRVVAHIRAGKFTLV--GAALGALAVAVMQLLGARLLTGASRNPML 279
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
A A+I+ L++ ++ ++ A A
Sbjct: 280 APFAAIIGVLIWFNLVAQVIMICAAFIAE 308
>gi|325996663|gb|ADZ52068.1| Ribonuclease BN [Helicobacter pylori 2018]
gi|325998253|gb|ADZ50461.1| putative Ribonuclease N [Helicobacter pylori 2017]
Length = 292
Score = 59.5 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 105/280 (37%), Gaps = 30/280 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVE---------EDGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE+F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MREFFKSVRGFLNLLRMIFPECFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFS---- 105
+ ++F P++I I D + + L +S + A
Sbjct: 61 SHYLQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSIVVALVLFCENY 119
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ + + R Y + + ++ FG L+ L ++ F + I + +
Sbjct: 120 RSIASKIFDAKPRDYAHFKGKEIFL--FWGFGTTLVFLFALPLVVFFDIKIQV---FFED 174
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+L ++L I + + + +F H F + V FT +SW
Sbjct: 175 KDSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHALK 225
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 226 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|15612364|ref|NP_224017.1| putative ribonuclease N [Helicobacter pylori J99]
gi|4155908|gb|AAD06877.1| putative ribonuclease N [Helicobacter pylori J99]
Length = 292
Score = 59.5 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 106/280 (37%), Gaps = 30/280 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE+F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MREFFKSVRGFLNLLRMIFPERFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFS---- 105
+ ++F P++I I D + + L +S + A
Sbjct: 61 SHYLQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSIVVALVLFCENY 119
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ + + R Y + + ++ FG L+ L ++ F + I + +
Sbjct: 120 RSIASKIFDAKPRDYAHFKGKEIFL--FWGFGTTLVFLFALPLVVFFDIKIQV---FFED 174
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 175 KDSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLK 225
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 226 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|229821436|ref|YP_002882962.1| ribonuclease BN [Beutenbergia cavernae DSM 12333]
gi|229567349|gb|ACQ81200.1| ribonuclease BN [Beutenbergia cavernae DSM 12333]
Length = 389
Score = 59.5 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/260 (13%), Positives = 100/260 (38%), Gaps = 10/260 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANL-AGFLGAHQFV-PTVIDVVFGAWP 71
+ + G +A I+ + L S+F + G + G LG + V+D + A P
Sbjct: 37 RTLARYGAAKGGLLAGGIAYAGLFSIFSALTIGFTVFVGLLGDDDELFQAVLDALDRALP 96
Query: 72 EVI-----AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
++ + + + V ++ + + + AL S+ + +
Sbjct: 97 GIVDTGDSSGGLLEPEQLVSNPGVGVAGVVAGVVLLLSALAVMGALGTSIRAMFGLATAP 156
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + R+ ++ ++++V+ + + +A +A ++V ++ ++ Y
Sbjct: 157 GNAILARVRDLVGFVVLALSVVVTAALGIAAGVAGSWVVDTLGLDSSVGAVLVRALGYLL 216
Query: 186 MLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + L A+ +L G ++ V L +V +T + + A
Sbjct: 217 AFVVDASIFVMLIRVLAGARPPRRDLLVGASIGALASGVIRFL-GTALVGGATANPLLAS 275
Query: 245 LASIMTCLVFLYMLGVFFIL 264
A+++T L+++ ++ +
Sbjct: 276 FAALVTLLLWVNLVARVTLY 295
>gi|317181090|dbj|BAJ58876.1| putative ribonuclease N [Helicobacter pylori F32]
Length = 293
Score = 59.1 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 52/280 (18%), Positives = 104/280 (37%), Gaps = 30/280 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V F + + + AS +S +LS+ P ++F +L
Sbjct: 2 MRELFKSVRGFFRLLRMIFPKHFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 61
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFS---- 105
+ ++F P++I I D + + L +S L A
Sbjct: 62 SSYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDIALGTLEEVSILVALVLFCENY 120
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ + + R Y + R ++ FG L+ L ++ F + I + +
Sbjct: 121 RSIASKIFQAKPRDYAHFKGREIFL--FWGFGTTLVFLFALPLVVFFDIKIQV---FFED 175
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 KNSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLK 226
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 266
>gi|322651329|gb|EFY47713.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
Length = 303
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 96/280 (34%), Gaps = 11/280 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 20 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS- 127
+ + + + A Y N + LR ++ ++ V E +
Sbjct: 80 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQ 139
Query: 128 ----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGR 181
++ L F ++ + L+I + A + + ++ L
Sbjct: 140 DQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIG 199
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 200 LAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPS 258
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 259 GAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 298
>gi|307638058|gb|ADN80508.1| Ribonuclease BN [Helicobacter pylori 908]
Length = 292
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 105/280 (37%), Gaps = 30/280 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE+F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MREFFKSVRGFLNLLRMIFPERFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFS---- 105
+ ++F P++I I D + + L +S + A
Sbjct: 61 SHYLQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSIVVALVLFCENY 119
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ + + R Y + + ++ FG L+ L ++ F + I + +
Sbjct: 120 RSIASKIFDAKPRDYAHFKGKEIFL--FWGFGTTLVFLFALPLVVFFDIKIQV---FFED 174
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+L ++L I + + + +F H F + V FT +SW
Sbjct: 175 KDSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHALK 225
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 226 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|296166403|ref|ZP_06848836.1| ribonuclease BN [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898248|gb|EFG77821.1| ribonuclease BN [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 323
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 99/268 (36%), Gaps = 20/268 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
++ I ++++ G +++ I+ +S+FP ++ G + G V+
Sbjct: 17 VVIAVIYKYLDDQGGYLSALITYYGFVSLFPLLLLLTTGLGVVLAGHPDLQQQVLHSTLS 76
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRV-VEMR 126
+P I D++ Q + + + +A A + GV +AL+ +++ + V R
Sbjct: 77 QFP-----VIGDQLHQPAGLSGGTVAVVVGVAGALYGGLGVGQALQNAMDSVWAVPRNKR 131
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + +LL + + + V A A + F G + +
Sbjct: 132 PDPLRSRLRSLLLLLVLGSAALAATVLSAAGQATGALGLFGKV----------GVVLVAV 181
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG-L 245
+ + A +LPG + + W + YI ++
Sbjct: 182 GINALICLVAFRVTTARDLTYRQVLPGALAAAVIWQILQWGGAGYIRHTVKTASATNSVF 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
A ++ L FL+++ +L AE+N ++
Sbjct: 242 ALVLGLLAFLFLVSSTLVLCAEINVVLV 269
>gi|317014780|gb|ADU82216.1| putative ribonuclease N [Helicobacter pylori Gambia94/24]
Length = 292
Score = 59.1 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 106/280 (37%), Gaps = 30/280 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE+F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MREFFKSVRGFLNLLRMIFPERFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFS---- 105
+ ++F P++I I D + + L +S + A
Sbjct: 61 SHYLQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSIVVALVLFCENY 119
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ + + R Y + + ++ FG L+ L ++ F + I + +
Sbjct: 120 RSIASKIFDAKPRDYAHFKGKEIFL--FWGFGTTLVFLFALPLVVFFDIKIQV---FFED 174
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 175 KDSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLK 225
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 226 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|208435278|ref|YP_002266944.1| putative ribonuclease N [Helicobacter pylori G27]
gi|208433207|gb|ACI28078.1| putative ribonuclease N [Helicobacter pylori G27]
Length = 292
Score = 58.7 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 96/249 (38%), Gaps = 21/249 (8%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLI-GAIKDFL 90
Query: 83 LQV--LAVPAKGLFTISALAAAYFS----SNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ L +S + A + + + R Y + + ++ F
Sbjct: 91 ENFKKTDMTLGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYAHFKGKEIFL--FWGF 148
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
G L+ L ++ F + I + + L ++L I + + + +F
Sbjct: 149 GTTLVFLFALPLVVFFDMKIQV---FFEDKDSNLLHVLRWIGTYAFFLILFTIPTNKVFK 205
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
H F + V FT +SW V FT+Y++ TY +Y ++ + + ++Y
Sbjct: 206 HYF---------WVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVY 256
Query: 257 MLGVFFILG 265
+ + ++G
Sbjct: 257 VSWLVILIG 265
>gi|308185167|ref|YP_003929300.1| putative ribonuclease N [Helicobacter pylori SJM180]
gi|308061087|gb|ADO02983.1| putative ribonuclease N [Helicobacter pylori SJM180]
Length = 292
Score = 58.7 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFLRLLRMIFPERFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S + A
Sbjct: 61 SHYLQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSIVVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 DSNLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|325068226|ref|ZP_08126899.1| ribonuclease BN [Actinomyces oris K20]
Length = 340
Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 92/264 (34%), Gaps = 16/264 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-LAGFLGA-HQFVPTVIDVVFGA 69
I A+ + G MA I+ + + SVF +V G + L LG V+D +
Sbjct: 17 IGRALIRYGTARGALMAGGIAYTGMFSVFAVLVIGVSILMAMLGRYPSIRAAVVDSINSL 76
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVVE- 124
P VI ++ V + + ++ A Y + + L+I+L + +V
Sbjct: 77 LPGVIDTGNGKGLVSVEQLTLSSALNLGSVLAAGAFIYSVISLMGTLKIALRAMFGLVNP 136
Query: 125 -MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
MR G++++ + LV V L+ + R W +
Sbjct: 137 VMRPVVGQLANLAGFLIIVAGVLVTAVASVVTTTLSGSVGRSLGLPQSLTGTGAWVMTLL 196
Query: 184 ATMLALFIGLIFVHL---FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L L F+ P + + + G + VG T +
Sbjct: 197 LSFLIDTGVLAFLITMCGIRPPRRDLLQGCMLGAFALGVLRQVGTGAVGS-----VTRNP 251
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
+ A A+I +++L++ +L
Sbjct: 252 LLASFAAIAVLILWLHLTSRVVLL 275
>gi|109948196|ref|YP_665424.1| tRNA processing ribonuclease BN [Helicobacter acinonychis str.
Sheeba]
gi|109715417|emb|CAK00425.1| tRNA processing ribonuclease BN [Helicobacter acinonychis str.
Sheeba]
Length = 272
Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/247 (18%), Positives = 91/247 (36%), Gaps = 17/247 (6%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L V ++F P++I I D +
Sbjct: 10 ELFYYASSLSFYTILSLSPILLFVFSLFVSDYMQAHSGEVEALIFPNAPKLI-GAIKDFL 68
Query: 83 LQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
L +S + A ++ + + + R + R
Sbjct: 69 ENFKKTNTALGTLEAVSIVVALVLFCENYRSIAS---KIFD-AKPRDYARCRGKEIFLFW 124
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
TLV + + + + + F +LL ++ YA L LF
Sbjct: 125 GFGTTLVFLFALPLVVFFDIKIRVFFEDKNSSLLHVLRWMGTYAFFLILFTI-------- 176
Query: 201 PAAK--SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
P K + V FT +SW V FT+Y++ TY +Y ++ + + ++Y+
Sbjct: 177 PTNKVFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVS 236
Query: 259 GVFFILG 265
+ ++G
Sbjct: 237 WLVILIG 243
>gi|34557836|ref|NP_907651.1| putative ribonuclease BN [Wolinella succinogenes DSM 1740]
gi|34483554|emb|CAE10551.1| PUTATIVE RIBONUCLEASE BN EC 3.1 [Wolinella succinogenes]
Length = 269
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 82/256 (32%), Gaps = 21/256 (8%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV----VFGAWP 71
+ F + + A+ +S + ++ P ++ +L F ++++ + P
Sbjct: 11 LWTFFDAELSFYAASLSFYTIFALIPLLLIVFSLLA--NLPNFQDQLLELKGFLLSNLMP 68
Query: 72 E--VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ D ++ + +A+ F N + N + R ++
Sbjct: 69 TNTEVVSLYLDRFMENSSKLGNMGLVYVLIASLLFFKNYQYIVAKMFN-----SKPRDFW 123
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + L + F + L G +
Sbjct: 124 SSVTVYWTLMTLLPIGLSLSIFFSTQAQMILEESGYHRLDPG--------VSGIVPAFLV 175
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ L + + + L + T + W+ F Y+ Y T+Y + ++
Sbjct: 176 WVMLFVLFKISANKPLTLRASLLSSLLTALVWLFSKWAFVFYVFHNKAYLTLYGSFSILL 235
Query: 250 TCLVFLYMLGVFFILG 265
L+++Y+ + G
Sbjct: 236 FFLLWVYLSWAILLYG 251
>gi|329945933|ref|ZP_08293620.1| ribonuclease BN-like family protein [Actinomyces sp. oral taxon 170
str. F0386]
gi|328528381|gb|EGF55359.1| ribonuclease BN-like family protein [Actinomyces sp. oral taxon 170
str. F0386]
Length = 340
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 88/261 (33%), Gaps = 10/261 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA--GFLGAHQFVPTVIDVVFGA 69
+ + + G MA I+ + + SVF +V G ++ V+D +
Sbjct: 17 VGRTLIRYGTARGALMAGGIAYTGMFSVFAVLVIGVSMLMAMLGNRPTLRAAVVDSINSL 76
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVVE- 124
P VI ++ V + + ++ A Y + + L+I+L + +V
Sbjct: 77 LPGVIDTGNGQGLVSVEQLTLTSALNLGSVVAVGALIYSVISLMGTLKIALRAMFGLVNP 136
Query: 125 -MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
MR G++++ + LV V L+ R W +
Sbjct: 137 VMRPMIGQLANIAGFLVIVAGVLVTAVASVVTTTLSGNVGRALGLPDSLTGTGAWLTTLL 196
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L L + + + G + + V + V+ + + + A
Sbjct: 197 ISFLIDTGVLALLITIC-GVRPPRRDLTLGCMLGAFALGVLRQV-GTGAVSSVSRNPLLA 254
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
A+I +++L++ +L
Sbjct: 255 SFAAIAVLVLWLHLTSRTVLL 275
>gi|328948873|ref|YP_004366210.1| cyclic nucleotide-binding protein [Treponema succinifaciens DSM
2489]
gi|328449197|gb|AEB14913.1| cyclic nucleotide-binding protein [Treponema succinifaciens DSM
2489]
Length = 425
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 88/253 (34%), Gaps = 22/253 (8%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFP--FIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+Y + F D + AS + LLSV P I+ L + + V +I
Sbjct: 20 LYLSSSLFFSNDLISSASACAFGFLLSVVPISMIICVVLLRVLHASPETVSALIS----- 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSN-GVEALRISLNRAYRVV 123
+ P + +I+ + K L F + +AA + S ++ + L R +
Sbjct: 75 -----SSPFSSQIISIEDSLPKSLKLVTNFEVVIIAAVVWMSRRFFSSVIVGLKRIFGKD 129
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY--VRKFFPALGNLLLIIW-NG 180
+ F L + ++ F+ +++ + L ++ +I
Sbjct: 130 ANSRPVKNMFLVFIGEALFVILFSLIIFIAISLKTIVLVPRFYGILEPLNHIADLISKTA 189
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + LF F + F + T S+ + F ++ + Y+
Sbjct: 190 AGFVPFIILFAATAFTYKFGSRTNPSWGISVLSSAGTCASFWILTKAFHLFV-NINRYNL 248
Query: 241 MYAGLASIMTCLV 253
+Y L++I+ L+
Sbjct: 249 VYGVLSNIIVMLM 261
>gi|15646017|ref|NP_208198.1| putative ribonuclease N [Helicobacter pylori 26695]
gi|2314579|gb|AAD08449.1| conserved hypothetical integral membrane protein [Helicobacter
pylori 26695]
Length = 292
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/248 (16%), Positives = 94/248 (37%), Gaps = 19/248 (7%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLI-GAIKDFL 90
Query: 83 LQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW--YITRLISFGY 138
+ L +S + A ++ + +A + R + + + I +
Sbjct: 91 ENFKKTDMTLGTLEEVSIVVALVLFCENYRSIASKIFQA----KPRDYAHFKGKEIFLFW 146
Query: 139 VLLASVTLVIMSFVFVAIPL-ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
++ + + V + + L ++L I + + + +F H
Sbjct: 147 GFGTTLVFLFALPLVVFFDIKIQVFFEDKNSNLLHVLRWIGTYAFFLILFTIPTNKVFKH 206
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F + V FT +SW V FT+Y++ TY +Y ++ + + ++Y+
Sbjct: 207 YF---------WVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYV 257
Query: 258 LGVFFILG 265
+ ++G
Sbjct: 258 SWLVILIG 265
>gi|326774148|ref|ZP_08233430.1| PE-PGRS family protein [Actinomyces viscosus C505]
gi|326636287|gb|EGE37191.1| PE-PGRS family protein [Actinomyces viscosus C505]
Length = 340
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 93/264 (35%), Gaps = 16/264 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-LAGFLGAHQFV-PTVIDVVFGA 69
+ A+ + G MA I+ + + SVF +V G + L LG H + V+D +
Sbjct: 17 VGRALIRYGTARGALMAGGIAYTGMFSVFAVLVIGVSMLMAMLGQHPTIRAAVVDSINSL 76
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVVE- 124
P VI ++ V + + ++ A Y + + L+I+L + +V
Sbjct: 77 LPGVIDTGNGRGLVSVEQLTLPSALNLGSVLAAGAFIYSVISLMGTLKIALRAMFGLVNP 136
Query: 125 -MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
MR G++++ + LV V L+ + R W +
Sbjct: 137 VMRPVVGQLANIAGFLVIVAGVLVTAVASVVTTTLSGSVGRSLGLPQSLTGTGAWVMTLL 196
Query: 184 ATMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L L + P + + + G + VG T +
Sbjct: 197 LSFLIDTGVLALLITVCGIRPPRRDLLQGCMLGAFALGVLRQVGTGAVGS-----VTRNP 251
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
+ A A+I +++L++ +L
Sbjct: 252 LLASFAAIAVLILWLHLTSRVVLL 275
>gi|218256947|ref|ZP_03474421.1| hypothetical protein PRABACTJOHN_00073 [Parabacteroides johnsonii
DSM 18315]
gi|218225868|gb|EEC98518.1| hypothetical protein PRABACTJOHN_00073 [Parabacteroides johnsonii
DSM 18315]
Length = 314
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 69/167 (41%), Gaps = 3/167 (1%)
Query: 102 AYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA 161
Y N + ++ + N +++ + R WY L+ V + S + + +
Sbjct: 2 FYTVINLISSIEDTFNDIWQIQKSRPWYRKISDYLALFLILPVLMTASSGLSIFLSTLQN 61
Query: 162 YVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+ L+ +I N Y + F G +++ LP K + ++ L I + I++
Sbjct: 62 SFFSQYFFFTPLVELILNITPYIITILAFTG---LYISLPNTKVRFVNGLVAGILSGIAF 118
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ + S Y+ +Y A++ L++L + + + GAE+
Sbjct: 119 QFFQFIYISGQIWVSKYNAIYGSFAALPLLLLWLQLSWLICLFGAEI 165
>gi|331006336|ref|ZP_08329649.1| Ribonuclease BN [gamma proteobacterium IMCC1989]
gi|330419857|gb|EGG94210.1| Ribonuclease BN [gamma proteobacterium IMCC1989]
Length = 219
Score = 58.3 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 73/207 (35%), Gaps = 7/207 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VV 66
VFD + F+++ A+ ++ L ++ P + ++ + A V + V+
Sbjct: 17 VFDFARNLGREFIDKGCQKNAAALTYMTLFALVPLLTVTYSMFSVIPAFSGVGDQLQGVI 76
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + + + + + A+ L I + + + + N + V + R
Sbjct: 77 FDNFVPETGEEVKGYLSD-FSNQARNLTGIGVGMLVVTAYLMLTNIEKAFNGIWGVKQAR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L+ + VL L+ + L+L V + + LG L+ +
Sbjct: 136 KGLSSFLL-YWAVLSLGPFLLGAGLLVSTYLLSLRLVVQEYDQLGVTPLLFQ----IIPL 190
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPG 213
L + + +P + + L G
Sbjct: 191 LMTTMAFTLLFAAVPNCRVPMRYALFG 217
>gi|163782522|ref|ZP_02177519.1| hypothetical protein HG1285_16600 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882095|gb|EDP75602.1| hypothetical protein HG1285_16600 [Hydrogenivirga sp. 128-5-R1-1]
Length = 265
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 97/272 (35%), Gaps = 27/272 (9%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
F ++ + + + ++ LLS+ P + NL L + +
Sbjct: 2 NLFRAFLQGAVLSLFDLLRNNYTYHSGALTYHFLLSMAPLTIVLLNLVSLLPMVEL-SEI 60
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYR 121
+ +P+ + + + + G ++ AL +YF S G ++ + +
Sbjct: 61 ERTLDRFFPQYTNRVVQEILE---VQKRSGQTSLIALGISYFFSVGFIKYMGRAFAFVSE 117
Query: 122 VV--EMRS---WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
E R W + G VL+ S++ ++ ++ + IP + + L L++
Sbjct: 118 GELGEKRELFYWLFMPVFLLGTVLVISLSFLLSIYIKLVIPTGYSLLLDLSYVLPGALML 177
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + L + ++ + + + FT YI
Sbjct: 178 SLIYRSFLKRGIGVTRLFLLSTYI-----------------SLLMFLSQLAFTWYIAHLF 220
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S +Y L++I+ L+++ ++ + + GA L
Sbjct: 221 KGSLLYGSLSTIVVSLLWINLIFLILLYGARL 252
>gi|495247|emb|CAA52959.1| unnamed protein product [Erwinia chrysanthemi]
Length = 328
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 87/256 (33%), Gaps = 11/256 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A + F + G + I+ + LS+ P ++ AGF+ + +I+ + +
Sbjct: 46 RAGDRFNDRMGNQFGAAITYFSFLSLIPILMVSFATAGFVLASNPDLLTGLINRIVNSIS 105
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS--- 127
+ + + L A Y N + LR +++ ++ V E +
Sbjct: 106 DPSLARTLKNTVNTAVRHGTTVGLTGLLIALYSGVNWIGNLREAIHAQSRDVWERQPHEE 165
Query: 128 --WYITRLISFGYVLLASV--TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
Y+ L F ++ + + + A + L ++ +
Sbjct: 166 EKIYLRYLWDFLSLIGLLLALVITLFLTSVAGSAQATIVRALGLNGIDWLRPVMTLIALS 225
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ A ++ +++ LP + +L G + I + T + +T S A
Sbjct: 226 ISIFANYLLFLWILWVLPRHNPRRGPLLRGTLMAAIGFEALKFAMTVALPELAT-SPSGA 284
Query: 244 GLASIMTCLVFLYMLG 259
S++ + F Y
Sbjct: 285 AFGSVIGLMTFFYFFA 300
>gi|293401174|ref|ZP_06645318.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305300|gb|EFE46545.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 272
Score = 57.9 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L + + ++ L + L G +F+ I + A LF + F++Y +Y
Sbjct: 151 LISSLIMLMFFYMMYRALSFRRHDWSFGLLGAMFSTICIMGLATLFVTIVKYFTSYQDVY 210
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LAS++T L+ +Y++ G LN M Y R+
Sbjct: 211 GPLASLVTLLLAIYLISCIIYFGFCLNLVMEETYGRE 247
>gi|311063605|ref|YP_003970330.1| ribonuclease BN [Bifidobacterium bifidum PRL2010]
gi|310865924|gb|ADP35293.1| Ribonuclease BN [Bifidobacterium bifidum PRL2010]
Length = 306
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/269 (12%), Positives = 99/269 (36%), Gaps = 8/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
+I I+ +V G +A+ ++ L + F + + G + G+ + ++ ++
Sbjct: 20 RSLIGRVIDRYVSRRGPLLANGLAYGLLFAFFAGVWIVVSALGLVVTGSEEMQKALLAML 79
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEM 125
P V + +L ++ ++ + + + +LR ++ + +
Sbjct: 80 RTVIPSVSDSLFSASMLSGISHTLTWTGLVTLAVFWWTVTGWMNSLRNAVTTMFDDCTQE 139
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIWNGRI 182
+ RL ++ +V ++ + V + V + + L L++ +
Sbjct: 140 LNVVKARLRDTVAAIMVAVLFILSTAAGVVSGGLMRLVLRALGIADDSLPGALLLESTGF 199
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L F + + + ++ +++ V L ++T ++ + M
Sbjct: 200 ATGVLLNFALFMLLLRVVAHIRAGKFTLV--GAALGALAVAVMQLLGARLLTGASRNPML 257
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
A A+I+ L++ ++ ++ A A
Sbjct: 258 APFAAIIGVLIWFNLVAQVIMICAAFIAE 286
>gi|315587260|gb|ADU41641.1| YihY family protein [Helicobacter pylori 35A]
Length = 292
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 103/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFLRLLRMIFPERLKNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S L A
Sbjct: 61 SSYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDIALGTLEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 NSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSISILWFLMSWVYVSWLVILIG 265
>gi|261838685|gb|ACX98451.1| ribonuclease N [Helicobacter pylori 51]
Length = 292
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V F + + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFFRLLRMIFPKHFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S L A
Sbjct: 61 SSYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDIALGTLEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 DSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|296128867|ref|YP_003636117.1| ribonuclease BN [Cellulomonas flavigena DSM 20109]
gi|296020682|gb|ADG73918.1| ribonuclease BN [Cellulomonas flavigena DSM 20109]
Length = 344
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 96/265 (36%), Gaps = 6/265 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN--LAGFLGAHQFVPTVIDVVFGA 69
+ A F + G + I+ ++L SVF + G +A + TV+ + A
Sbjct: 62 VARANARFGQAGGGLLTGGIAYTSLFSVFAGLTIGYTAFMAVLGNNAELRETVLLTISEA 121
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVVEM 125
P +I +L+ + +++ + A + + + ALR ++ + +
Sbjct: 122 LPGIIDTGDGTGLLEPDELVMTAGLSVAGVVAFGVLLFSAISATSALRTAVRAMFGAHDA 181
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ +L G + ++ +++ + + + + A ++ +++ I
Sbjct: 182 VTIVAGKLRELGGFVGIALAVLLSAVLGIVVTTAADWLLGALGISDGSGVVLRVVGIVVA 241
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + V L +L G V VL T + + + A
Sbjct: 242 FVVDALVFVMVVRVLAGQAPPRRDLLHGAGIAAAGLGVVRVLGTSVVAGSVQANPVLASF 301
Query: 246 ASIMTCLVFLYMLGVFFILGAELNA 270
A ++ L+++ ++ +L A A
Sbjct: 302 ALVVVLLLWINLIARIVLLAAAWTA 326
>gi|224282267|ref|ZP_03645589.1| ribonuclease BN [Bifidobacterium bifidum NCIMB 41171]
Length = 305
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/264 (12%), Positives = 97/264 (36%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
I+ +V G +A+ ++ L + F + G + G+ + T++ ++ P
Sbjct: 25 RVIDRYVSRRGPLLANGLAYGLLFAFFAGAWIVVSALGLVVTGSEEMQKTLLAMLRTVIP 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-VVEMRSWYI 130
V + +L ++ ++ + + + +LR ++ + + +
Sbjct: 85 SVSDSLFSASMLSGISHTLTWTGLVTLAVFWWTVTGWMNSLRNAVTTMFDDCTQELNVVK 144
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIWNGRIYATML 187
RL ++ +V ++ + V + V + + L L++ + +L
Sbjct: 145 ARLRDTVAAIMVAVLFILSTAAGVVSGGLMRLVLRALGIADDSLPGALLLESTGFATGVL 204
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
F + + + ++ +++ V L ++T ++ + M A A+
Sbjct: 205 LNFALFMLLLRVVAHIRAGKFTLV--GAALGALAVAVMQLLGARLLTGASRNPMLAPFAA 262
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
I+ L++ ++ ++ A A
Sbjct: 263 IIGVLIWFNLVAQVIMICAAFIAE 286
>gi|297204753|ref|ZP_06922150.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297148773|gb|EDY56485.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 386
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 84/274 (30%), Gaps = 25/274 (9%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F +I + H + + + A+ ++ L+ P + A++A QFV
Sbjct: 97 LRNRAENRFPVITHLLSHLISVNVFDSATRLAAQTFLTAVPLLFVVASIAPQWLRDQFVT 156
Query: 61 TVIDVVFGAWPEVI-AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + + + + L ++ A++ RA
Sbjct: 157 SLHEAFGLTGSANAELNKVLKGTDDPSDELRQTTGVVGGLMVLLSATACSRAMQRLCQRA 216
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ S + + A+ +L LG LL+I
Sbjct: 217 ---------WSLPKASARVAAWRWIAWLATWLAMFAVQGSLRTGFGLGLWLGVPLLLIAE 267
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I+ L + A+ +LPG + + V + Y+ +S
Sbjct: 268 VGIWWWTQHLLLV----------ARVPWRPLLPGALLAGTALAVLTSTASLYVPRALNHS 317
Query: 240 -TMYAGLASIMTCLVFLYMLGVF----FILGAEL 268
Y L ++ T L +L L V GA +
Sbjct: 318 LAKYGSLGAVFTLLSWLITLCVVTTLCLTAGAVI 351
>gi|77413114|ref|ZP_00789314.1| putative ribonuclease BN [Streptococcus agalactiae 515]
gi|77160815|gb|EAO71926.1| putative ribonuclease BN [Streptococcus agalactiae 515]
Length = 109
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I + HF + A ++ L++ FP +V AN+ + + V ++ ++
Sbjct: 16 YRPIQVFMRHFQSAEMDLSAIAVAYYLLVTAFPLLVIAANIFPYFHIN--VSDLLSLMQK 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF 104
P+ I +P + + + P+ G+ ++L A +
Sbjct: 74 NLPKNIYEPASRLAVDAFSKPSTGILGFASLTAFWT 109
>gi|261840085|gb|ACX99850.1| ribonuclease BN [Helicobacter pylori 52]
Length = 292
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V F + + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFFRLLRMIFPKHFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S L A
Sbjct: 61 SSYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDIALGTLEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 NSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|317182613|dbj|BAJ60397.1| putative ribonuclease N [Helicobacter pylori F57]
Length = 292
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V F + + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFFRLLRMIFPKHFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S L A
Sbjct: 61 SSYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDIALGTLEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYVHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 DSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|313683303|ref|YP_004061041.1| tRNA-processing RNAase bn [Sulfuricurvum kujiense DSM 16994]
gi|313156163|gb|ADR34841.1| tRNA-processing RNAse BN [Sulfuricurvum kujiense DSM 16994]
Length = 268
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 82/262 (31%), Gaps = 14/262 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ I + + AS +S + +V P ++ +L + + I
Sbjct: 2 KLKALLRHIRLFFLMLFDREITVYASSLSFYTIFTVVPLLIISLSLIANVPVFEEQYAKI 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L+ + L I S + +++ ++V
Sbjct: 62 QIFIFENMMPVQTAAVAGYLESFFQNSVQLGVIGFTTMIVSSLLFFQNFEHIVSKIFKVP 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + I+ + L + + V +A AY+ L I+
Sbjct: 122 -KRGLWDA--ITTYWTL-----ITLTPIVLIASMSLNAYLVSHVSGAALHALSIF----- 168
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L L+ ++ A + + W + F Y+ TY+TMY
Sbjct: 169 -PFLLLWGIFFVIYHIAVNADVSPKAAAISSFIVAVVWGIAKNSFIQYVFYNKTYATMYG 227
Query: 244 GLASIMTCLVFLYMLGVFFILG 265
++++ +++Y+ + I G
Sbjct: 228 SFSALIFFFLWIYVSWIIVIYG 249
>gi|309774723|ref|ZP_07669746.1| YihY family protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308917496|gb|EFP63213.1| YihY family protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 272
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 47/108 (43%)
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ + + + + + ++ L K + G +F+ I + A LF +
Sbjct: 141 IATRLNEFLPIVSAVIMLLLFTMMYRALSFRKRNWSFGIIGAMFSTICILGLAALFVTIV 200
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
F++Y +Y LAS++T L+ +Y++ LG LN Y R++
Sbjct: 201 SHFTSYKDVYGPLASLVTLLLAIYLISCIIYLGFCLNLICEEDYGREE 248
>gi|330723864|gb|AEC46234.1| hypothetical protein SRH_03470 [Mycoplasma hyorhinis MCLD]
Length = 342
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 68/186 (36%), Gaps = 2/186 (1%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
A++ + S NG L S + Y SW +L + V+ ++ + + +
Sbjct: 143 ILFLAISTLWISINGYSKLMASQSTIYNHKNKGSWIYGKLKALFIVI--AIVIFVSFSLI 200
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
+ P+ + + + ++ + + + G + + +LP + K I+PG
Sbjct: 201 IITPIMMYLKQALINSESVYDVLFYIISSFYLIFFFTSGWLLMFKWLPVFQLKFKDIVPG 260
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
I +S ++F + + Y +AS + F + FF +N S
Sbjct: 261 WIIASLSSAFFTIIFGYLVSNKYIKYEKYGSMASFLYLSTFSLYISYFFYFALTINYSYA 320
Query: 274 IYYWRK 279
+ K
Sbjct: 321 QVFSTK 326
>gi|317010065|gb|ADU80645.1| ribonuclease N [Helicobacter pylori India7]
Length = 292
Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 103/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFLRLLRMIFPERLKNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S L A
Sbjct: 61 SHYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDIALGTLEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 DSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|225619115|ref|YP_002720341.1| ribonuclease BN [Brachyspira hyodysenteriae WA1]
gi|225213934|gb|ACN82668.1| Ribonuclease BN, Ribonuclease BN-like family [Brachyspira
hyodysenteriae WA1]
Length = 552
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 90/226 (39%), Gaps = 16/226 (7%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVF 67
+ II A+ F ++D A+ ++ LS P ++ G + +Q + + D +
Sbjct: 4 YRIIVFAVTDFFKDDCTIRAAALTYLVTLSFIPTLIVGLFILRIFNIYQNIFVFIFDWME 63
Query: 68 GAWPEVIAKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +P+ +IL + I ++ + + +++ SL + +RV
Sbjct: 64 KNAP--FYEPMVRQILNIADNTDLASFGIIGIISTVVSVALILHSIQRSLIKIWRVKIKT 121
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S I R+ + LL + ++I + Y +L L+ I+ + +
Sbjct: 122 S--IPRVAANYIALLFLIPILIGISF-----TLITYTSISLHSLPALIKILLS--WVTPI 172
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
++ + ++F+++ +P K + + ++ + LF+ Y
Sbjct: 173 ISTSLLVLFLYVLVPQTKVNWSNATISSVLVAMAII---TLFSVYF 215
>gi|313898696|ref|ZP_07832231.1| YihY family protein [Clostridium sp. HGF2]
gi|312956580|gb|EFR38213.1| YihY family protein [Clostridium sp. HGF2]
Length = 272
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 47/108 (43%)
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ + + + + + ++ L K + G +F+ I + A LF +
Sbjct: 141 IATRLNEFLPIVSAVIMLLLFTMMYRALSFRKRNWSFGIIGAMFSTICILGLAALFVTIV 200
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
F++Y +Y LAS++T L+ +Y++ LG LN Y R++
Sbjct: 201 SHFTSYKDVYGPLASLVTLLLAIYLISCIIYLGFCLNLICEEDYGREE 248
>gi|317179585|dbj|BAJ57373.1| putative ribonuclease N [Helicobacter pylori F30]
Length = 292
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V F + + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFFRLLRMIFPKHFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S L A
Sbjct: 61 SSYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDIALGTLEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYVHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 NSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|217032401|ref|ZP_03437895.1| hypothetical protein HPB128_164g1 [Helicobacter pylori B128]
gi|216945880|gb|EEC24498.1| hypothetical protein HPB128_164g1 [Helicobacter pylori B128]
Length = 272
Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 94/248 (37%), Gaps = 19/248 (7%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 16 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYMQAHSGEMEALIFPNAPKLI-GAIKDFL 74
Query: 83 LQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW--YITRLISFGY 138
+ L +S L A ++ + +A + R + + + I +
Sbjct: 75 ENFKKTDMTLGTLEEVSILVALVLFCENYRSIASKIFQA----KPRDYAHFKGKEIFLFW 130
Query: 139 VLLASVTLVIMSFVFVAIPL-ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
++ + + V + + L ++L I + + + +F H
Sbjct: 131 GFGTTLVFLFALPLVVFFDIKIQVFFEDKDSNLLHVLRWIGTYAFFLILFTIPTNKVFKH 190
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F + V FT +SW V FT+Y++ TY +Y ++ + + ++Y+
Sbjct: 191 YF---------WVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYV 241
Query: 258 LGVFFILG 265
+ ++G
Sbjct: 242 SWLVILIG 249
>gi|288920015|ref|ZP_06414335.1| ribonuclease BN protein [Frankia sp. EUN1f]
gi|288348579|gb|EFC82836.1| ribonuclease BN protein [Frankia sp. EUN1f]
Length = 71
Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + I + + P + + + PG + W+ + F Y+ F +Y+ Y
Sbjct: 1 MLVLLVIIMIALPYWSAPNVRVRGFRWLTPGSALAVVIWLAASAGFGLYVANFGSYNKTY 60
Query: 243 AGLASIMTCL 252
LA ++ L
Sbjct: 61 GTLAGVIIFL 70
>gi|188528174|ref|YP_001910861.1| putative ribonuclease N [Helicobacter pylori Shi470]
gi|188144414|gb|ACD48831.1| putative ribonuclease N [Helicobacter pylori Shi470]
Length = 292
Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 104/279 (37%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MR++F V ++ F + + + AS +S +LS+ P ++F +L
Sbjct: 1 MRDFFKSVRGFLHLLRMIFPKHFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + +S L A
Sbjct: 61 SNYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTFEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 NSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|284990788|ref|YP_003409342.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284064033|gb|ADB74971.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 328
Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 97/260 (37%), Gaps = 16/260 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F+++D +A+ I+ LS+FP ++ A + G + G + ++D G +P
Sbjct: 23 VVYKFMDDDAHFLAALITYYGFLSLFPTLLLLATVLGLVLAGDPELQQRLLDSALGEFPV 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-RS-WYI 130
+ + E L + L A Y + +AL+ ++N + V R
Sbjct: 83 IGPQLARPEGLGGGVTGIV----VGGLVALYGALGLGQALQHAMNTVWAVPRHSRPDPIT 138
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+R S + + L+ + + A G + A++LA
Sbjct: 139 SRGRSLLLLCTLGLLLLASTVLS-------ALGTGAAAYGGGFSGGVHVLLTVASVLANA 191
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIM 249
+ + + +LPG + + W + Y+ + S + A A ++
Sbjct: 192 AVFVLGFRVTTSRRLTTRQVLPGAVTAAVLWQLLQSFGGVYVARVVANASAVDAVFALVL 251
Query: 250 TCLVFLYMLGVFFILGAELN 269
+ F+Y+ V +L E++
Sbjct: 252 GLIAFIYVAAVALMLCVEID 271
>gi|237734846|ref|ZP_04565327.1| predicted protein [Mollicutes bacterium D7]
gi|229382174|gb|EEO32265.1| predicted protein [Coprobacillus sp. D7]
Length = 292
Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 93/266 (34%), Gaps = 17/266 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ ++ I + + + + + ++S+ P A A L
Sbjct: 4 MKKLIQRLYYRINNRVLDYRYKVNKNAGLCFAYYLIMSIIPICSLFAFFASILNVD---- 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALA-AAYFSSNGVEALRISLNRA 119
+ + + ++ I+ L L +I L + + S G+ L
Sbjct: 60 --LGTLEQLLKNYLTPEFSNIIIASLKSSHITLSSIIILFISLFVVSRGINQLYGISKNL 117
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ R+ I +L+ I FV + + +++ + N I+
Sbjct: 118 FPSAHQRNIIIEQLLMLLKT--------IAVFVLLLLIISILTIIPLINYFINFKDILVL 169
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G +Y L FI L ++ +P I I+ G + I ++ Y + Y+
Sbjct: 170 GDLYL-FLVFFIILFLLYKIIPDVHVHIFDIVKGAFCSSILMLILLSALEFYFS-IADYT 227
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
++Y LAS++ ++ ++ +G
Sbjct: 228 SVYGPLASVVVIMISFSLIAETIFIG 253
>gi|290473340|ref|YP_003466206.1| hypothetical protein XBJ1_0257 [Xenorhabdus bovienii SS-2004]
gi|289172639|emb|CBJ79408.1| putative membrane protein [Xenorhabdus bovienii SS-2004]
Length = 285
Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 93/276 (33%), Gaps = 11/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
M F + A + F + G + I+ + LS+ P ++ +AGF+
Sbjct: 1 MPRDFVPFIAHLIRAAQRFNDRMGSQFGAAITYFSFLSLIPILMLSFAIAGFVLASNPDL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS-LN 117
+ +I+ + + + + + A Y N V LR + L
Sbjct: 61 LTRLINGIANSISDPSLANTLKNSVDTAVNQRTTVGLTGLAIALYSGVNWVGNLREAILA 120
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
++ V E ++ S S+ ++ + V ++A + L I
Sbjct: 121 QSRDVWERHHAEKEKIYSQYIRDFFSLFGLLFALVITLSLTSIAGSAQATLVHAFGLEGI 180
Query: 178 WNGRIYATMLALFIGLIFVH-------LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
R T++ + I + + LP + + ++ G + I + + + T
Sbjct: 181 EWLRPAWTLIGMTISISANYLLFLWILWILPRHQPERKALFQGTLMAAIGFEIIKYIMTI 240
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ ++ S A S++ + F Y + A
Sbjct: 241 MLPKLAS-SPSGAAFGSVIGLMAFFYFFARLTLFCA 275
>gi|332674167|gb|AEE70984.1| YihY family protein [Helicobacter pylori 83]
Length = 288
Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 102/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V + F + + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFLRLLRMIFPKHFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S L A
Sbjct: 61 SSYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDIALGTLEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYVHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 NSNLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|289548296|ref|YP_003473284.1| ribonuclease BN [Thermocrinis albus DSM 14484]
gi|289181913|gb|ADC89157.1| ribonuclease BN [Thermocrinis albus DSM 14484]
Length = 256
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/257 (16%), Positives = 96/257 (37%), Gaps = 17/257 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ ++I ++ + AS ++ + + ++ L + + V + P
Sbjct: 8 LTESIWLLLKGEFGYHASALTYRFFMVIGSLLILTGILISYTPLANY--EVYTYLARLIP 65
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E + + L+ L IS L A YF+++ ++R + A + +
Sbjct: 66 EKAGEVMMR--LETLYRHRGTGSFISVLLAYYFAADLAGSMRTAFGYATGIKPKGRYISL 123
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI+ Y+LL S+ L +++ + L L + + + L
Sbjct: 124 FLITPLYLLLLSLFLSLLALFPAVMKLFLPWAPQLV-------------LWPVKFMILTG 170
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ + K +L +F+ + V LFT I+ + +YA + S++
Sbjct: 171 MIYVTYYIFLPVSVKPQHLLKASLFSAVLITVLNYLFTVVIIKLVHANPLYAVMGSVLVF 230
Query: 252 LVFLYMLGVFFILGAEL 268
+V++ + V + GA L
Sbjct: 231 MVWMEKVFVILLTGARL 247
>gi|331699721|ref|YP_004335960.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
gi|326954410|gb|AEA28107.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
Length = 359
Score = 56.8 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 80/264 (30%), Gaps = 22/264 (8%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
VE D A ++ A + + P + +L + + DV A
Sbjct: 92 RRIVEVDLANQALILAALAFMLLVPAL---VSLQAVIPLGATGGGLTDVARRLGLTDQAT 148
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ A+ + + AL+ A+ + + R +
Sbjct: 149 SDLQTLFPGREAVRGATTIFGAVLTLVSAFSWPAALQRGYELAWGLPSAGWRALWRPL-- 206
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
L V S ++ PL +VR P + L + I +L
Sbjct: 207 ---LWLGTFAVFGSLWGLSGPLVTGWVRAIVPIIIGLPIAIGWAWWTQHLLL-------- 255
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCLVFL 255
+ +LPG I I + + + Y+ + ++ Y L + L +L
Sbjct: 256 -----GGRIGWRPLLPGAIAIGIGLLGLRIAASLYLSRSIVSHHREYGPLGIVFVLLSWL 310
Query: 256 YMLGVFFILGAELNASMIIYYWRK 279
GV + GA L + + R+
Sbjct: 311 VAFGVVMLGGALLGVFLREHRQRR 334
>gi|217034542|ref|ZP_03439952.1| hypothetical protein HP9810_897g27 [Helicobacter pylori 98-10]
gi|216943023|gb|EEC22504.1| hypothetical protein HP9810_897g27 [Helicobacter pylori 98-10]
Length = 276
Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 95/248 (38%), Gaps = 19/248 (7%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 16 ELFYYASSLSFYTILSLSPILLFVFSLFVSSYMQAHSGEMEALIFPNAPKLI-GAIKDFL 74
Query: 83 LQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW--YITRLISFGY 138
+ L +S L A ++ + +A + R + + + I +
Sbjct: 75 ENFKKTDIALGTLEEVSILVALVLFCENYRSIASKIFQA----KPRDYAHFKGKEIFLFW 130
Query: 139 VLLASVTLVIMSFVFVAIPL-ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
++ + + V + + +L ++L I + + + +F H
Sbjct: 131 GFGTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPTNKVFKH 190
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F + V FT +SW V FT+Y++ TY +Y ++ + + ++Y+
Sbjct: 191 YF---------WVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYV 241
Query: 258 LGVFFILG 265
+ ++G
Sbjct: 242 SWLVILIG 249
>gi|74317588|ref|YP_315328.1| cyclic nucleotide-binding domain-containing protein [Thiobacillus
denitrificans ATCC 25259]
gi|74057083|gb|AAZ97523.1| Cyclic nucleotide-binding domain (cNMP-BD) protein [Thiobacillus
denitrificans ATCC 25259]
Length = 424
Score = 56.8 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 77/262 (29%), Gaps = 9/262 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + Y F + A+ + LLS P ++ + LG
Sbjct: 13 LSRIVQLGYTTARLFTQNGLQNHAAATAFYFLLSATPLLLLLSYGLTLLGQIAENSVPAT 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ A E + E+ + + ++ + S V ++ + + E
Sbjct: 73 ILLAALYEQMRLDSLTELGFIPSQTELTAGSVGLVTLLLSSRGLVNTMQGAFRIIFPARE 132
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS+ S+ L+ L + V + L ++ + ++
Sbjct: 133 KRSFV----GSWILPLVVLPLLFALMGVAALAQVTLTFLGQNDFIGTGNARVLQVLNSLF 188
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF--STYSTMY 242
++ L + LP +F + +L + F Y ++Y
Sbjct: 189 GFAMVWALLFTAYWRLPRRHPPARVA---AVFALGAIASLGLLLVLFGAFFELENYLSLY 245
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
L ++ L+ Y +
Sbjct: 246 GALGGVVFVLIGAYFAFLLLYF 267
>gi|15604851|ref|NP_219635.1| hypothetical protein CT132 [Chlamydia trachomatis D/UW-3/CX]
gi|76788847|ref|YP_327933.1| hypothetical protein CTA_0139 [Chlamydia trachomatis A/HAR-13]
gi|237802562|ref|YP_002887756.1| hypothetical protein JALI_1311 [Chlamydia trachomatis B/Jali20/OT]
gi|237804479|ref|YP_002888633.1| hypothetical protein CTB_1311 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255310933|ref|ZP_05353503.1| hypothetical protein Ctra62_00680 [Chlamydia trachomatis 6276]
gi|255317233|ref|ZP_05358479.1| hypothetical protein Ctra6_00680 [Chlamydia trachomatis 6276s]
gi|255348494|ref|ZP_05380501.1| hypothetical protein Ctra70_00695 [Chlamydia trachomatis 70]
gi|255503036|ref|ZP_05381426.1| hypothetical protein Ctra7_00705 [Chlamydia trachomatis 70s]
gi|255506707|ref|ZP_05382346.1| hypothetical protein CtraD_00700 [Chlamydia trachomatis D(s)2923]
gi|3328531|gb|AAC67723.1| hypothetical protein CT_132 [Chlamydia trachomatis D/UW-3/CX]
gi|76167377|gb|AAX50385.1| ribonuclease BN [Chlamydia trachomatis A/HAR-13]
gi|231272779|emb|CAX09685.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273796|emb|CAX10579.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
gi|289525174|emb|CBJ14648.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296434721|gb|ADH16899.1| hypothetical protein E150_00700 [Chlamydia trachomatis E/150]
gi|296435648|gb|ADH17822.1| hypothetical protein G9768_00680 [Chlamydia trachomatis G/9768]
gi|296436571|gb|ADH18741.1| hypothetical protein G11222_00685 [Chlamydia trachomatis G/11222]
gi|296437508|gb|ADH19669.1| hypothetical protein G11074_00680 [Chlamydia trachomatis G/11074]
gi|296438439|gb|ADH20592.1| hypothetical protein E11023_00690 [Chlamydia trachomatis E/11023]
gi|297140007|gb|ADH96765.1| hypothetical protein CTG9301_00680 [Chlamydia trachomatis G/9301]
gi|297748261|gb|ADI50807.1| Ribonuclease BN [Chlamydia trachomatis D-EC]
gi|297749141|gb|ADI51819.1| Ribonuclease BN [Chlamydia trachomatis D-LC]
Length = 425
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 92/263 (34%), Gaps = 4/263 (1%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ I A + + A +S L S P +VF L+ +L + +
Sbjct: 19 FIIKSILKAPKVLYHNEASKEACVLSYYGLFSCVPILVFFLRLSQYLFIS---LDWKEWL 75
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEM 125
+P+ A + G+ +S+ ++ + ++L LN+ +
Sbjct: 76 LLHFPDYKAPILAIIEAAYSTTSNIGVVLVSSFFVFCWAGILMLQSLEDGLNKIFCSGIT 135
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
++ + L++ + +I+ ++ I L + + + I+
Sbjct: 136 QASLKRLISYLVITLVSPMIFIIVCGSWIYITQILPINYPQLFSFSHSMAFIYIVSRLLP 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L+ L + FL +K + +W++ +F + YS Y L
Sbjct: 196 YALLYGILFCCYAFLSRVPTKKSAAFFAATIAGSAWILSQKIFFCLQLHLFNYSFTYGAL 255
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
++ + L+ LY+ + ++ G L
Sbjct: 256 VALPSFLLLLYLYAIIYLFGGAL 278
>gi|308062670|gb|ADO04558.1| putative ribonuclease N [Helicobacter pylori Cuz20]
Length = 288
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 103/279 (36%), Gaps = 28/279 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVE---------EDGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MRELFKSVRGFLRLLRMIFPECLKNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGV 109
+ ++F P++I I D + + L +S L A
Sbjct: 61 SNYMQAHSGEMEALIFPNAPKLI-GAIKDFLENFKKTDMTLGTLEEVSILVALVLFCENY 119
Query: 110 EALRISLNRAYRVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKF 166
++ + +A + R + + + I + ++ + + V + +
Sbjct: 120 RSIASKIFQA----KPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDK 175
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+L ++L I + + + +F H F + V FT +SW V
Sbjct: 176 NSSLLHVLRWIGTYAFFLILFTIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKW 226
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 227 AFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|78486113|ref|YP_392038.1| ribonuclease BN, putative [Thiomicrospira crunogena XCL-2]
gi|78364399|gb|ABB42364.1| tRNA-processing RNAse BN [Thiomicrospira crunogena XCL-2]
Length = 280
Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 103/255 (40%), Gaps = 13/255 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWP 71
A ++F++++G + ++ ++L+ + PF+ ++ G+ V T + ++ P
Sbjct: 15 QASQNFIKKEGLDAVTVLAYASLVGLVPFLTIIFSVFSMSGSFDSVQTDVMDKIMHYLLP 74
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E K + L+ + A+ L + + + + + + +N + R+W+++
Sbjct: 75 ESTPKV--EFYLRQFSEKARELQGVGIMVMLFIALILLWTVDKKINLMWSKHLQRTWWVS 132
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L G ++ + L + + FP L + A +L +
Sbjct: 133 LLRYLGVSIIGPILLGFSLVLNSML-----MAGPIFPVLQEQTWALNQ----APVLINIL 183
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
G F++ F+P K+ G + + + LF+ Y+ F T S +Y A I
Sbjct: 184 GFAFIYHFVPIHPVKVSYAFIGALLASLELELLKFLFSFYVDWFPTVSIVYGAFAVIPLF 243
Query: 252 LVFLYMLGVFFILGA 266
L +LY+L I A
Sbjct: 244 LFWLYLLWFVIIFNA 258
>gi|254387231|ref|ZP_05002495.1| integral membrane protein [Streptomyces sp. Mg1]
gi|194346040|gb|EDX27006.1| integral membrane protein [Streptomyces sp. Mg1]
Length = 333
Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 92/264 (34%), Gaps = 11/264 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ I+ + L++FP I A + L + + + + P
Sbjct: 34 WRSYERLDRVHWTRLAAAITFISFLALFPLITVAAAVGAALLSQDQLDKLEKNLSQQVPG 93
Query: 73 VIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEMRSWY 129
I+D++ + L A + ++ + + V A+R L + + +
Sbjct: 94 -----ISDQLDINGLVANAGTVGLVAGAILLFAGISWVGAMRDCLRAVWDKDDEDQGNPV 148
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNGRIYATML 187
+ +L + + + A+ + P G ++ ++
Sbjct: 149 ARKGKDTLVLLGLGAAGLASAAASIIGASAVGKFGGWLGIPPHGVGGGVLRAAAFLVGVV 208
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ L++V LP + ++ + + + +L + Y+ + S MY
Sbjct: 209 AAFLLLLYVLTLLPGVEPPRGRLIQAALIGAAGFELLKLLLSGYMREVAAKS-MYGAFGV 267
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + + A+
Sbjct: 268 PIALLLWINFTAKLLLYCSAWTAT 291
>gi|325123559|gb|ADY83082.1| putative ribonuclease (Rbn) [Acinetobacter calcoaceticus PHEA-2]
Length = 211
Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 67/205 (32%), Gaps = 8/205 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFVLYVFKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVV--FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + P+ D+ L + L I L + + ++ NR
Sbjct: 69 QQLQHLIYSNFLPKSTIAF--DKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+RV E RS + + + ++ ++ +FV + ++ + F +
Sbjct: 127 IWRVKETRSGIMG-FMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLDGAFL- 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAA 203
+ + +G ++ +P
Sbjct: 185 --LWLISFVLTILGFFILYWTIPNR 207
>gi|294631035|ref|ZP_06709595.1| integral membrane protein [Streptomyces sp. e14]
gi|292834368|gb|EFF92717.1| integral membrane protein [Streptomyces sp. e14]
Length = 319
Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 92/262 (35%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ ++ + +++FP + A + + T+ + +P
Sbjct: 35 WRSYERLDRVKWTRLAAAMTFVSFVALFPLLTVAAAVGAATLSGAQQRTLEGKIAQQFPG 94
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-RSWYIT 131
+ + + LA A + I+ N V +R L + + + + +
Sbjct: 95 LGNELD----IASLAQNAGTVGIIAGAVLLLTGVNWVGQVRDCLRAVWELADPDENPILA 150
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-- 189
RL G ++ +++ A+ +V + + + + L
Sbjct: 151 RLKDAGVLVGLGGAVLVTFAASAVASAAVGWVSRQIGLDEHGWGSVVLRVAAFVVAVLAD 210
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP + +L + + + + +L + YI + + MY +
Sbjct: 211 FLVLLYVLTLLPGVEPPRRRLLVAALVGAVGFELLKLLLSGYIQGVAAKN-MYGAFGVPV 269
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A+
Sbjct: 270 ALLLWINFTCKLVLYCAAWTAT 291
>gi|119962009|ref|YP_947024.1| ribonuclease BN-like family protein [Arthrobacter aurescens TC1]
gi|119948868|gb|ABM07779.1| putative ribonuclease BN-like family [Arthrobacter aurescens TC1]
Length = 308
Score = 56.4 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 98/262 (37%), Gaps = 9/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
A +H+ + G +++ I + SV + G +AG + G VID V A
Sbjct: 18 MRAFQHYTRQHGPLLSAGIGFNMFFSVTGLLTTGFAIAGIVLGGNPALQDAVIDSVAAAA 77
Query: 71 PEVIA----KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE-M 125
P ++ + + D + I+A+ + S + ++R L + +
Sbjct: 78 PGLLQVNGGEGLVDPQSLLNPSGLGWTALIAAVVTVFVSLGWIASIREGLRGIMKADPLV 137
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ + +LI G +LL V LVI + V + +A ++ + I
Sbjct: 138 RNPIVQKLIDAGTLLLLGVILVISAGVSLVFGIAADWLIALLKLDEGITEPIAAIVKIVV 197
Query: 186 MLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L + K + L GV+ + V F+ ++ S + + A
Sbjct: 198 PLVLNCATAAVLFRIAGGLKLGRRAFLEGVVLAGVGTTVL-QFFSTELLARSGNNPVLAS 256
Query: 245 LASIMTCLVFLYMLGVFFILGA 266
A I+ L++ ++ ++ A
Sbjct: 257 FAIIIGLLIWFNLVSQVCLVSA 278
>gi|226304761|ref|YP_002764719.1| hypothetical protein RER_12720 [Rhodococcus erythropolis PR4]
gi|229492375|ref|ZP_04386182.1| ribonuclease BN [Rhodococcus erythropolis SK121]
gi|226183876|dbj|BAH31980.1| hypothetical protein RER_12720 [Rhodococcus erythropolis PR4]
gi|229320784|gb|EEN86598.1| ribonuclease BN [Rhodococcus erythropolis SK121]
Length = 325
Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 86/240 (35%), Gaps = 20/240 (8%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F+++ G +A+ I+ +S+FP ++ + + GF+ G + ++D +P
Sbjct: 23 VLYKFLDDQGVYLAALIAYYGFVSLFPLLLLLSTILGFVLSGNPELQQQILDSALHQFP- 81
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL--RISLNRAYRVVEMRSWYI 130
I D++ G+ + AL + ++N + V
Sbjct: 82 ----VIGDDLGN-AQQIGGGVTGLVIGIVGGLYGGLGVALACQNAMNTVWSVPRNMRPDP 136
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R G +LL ++ L I+ V+ ++ F L L +++ N I+ L
Sbjct: 137 IRGRLQGLLLLGTIGLAILGTTAVSNIGGALHLGGSFSFLLTLAVVVLNAGIFIVAFRLT 196
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + PG I + W Y+ + ++ G+ +I+
Sbjct: 197 CA----------RPLSVADVAPGAIAAAVLWQALQSFGALYVTSVVRGASTTNGVFAIVL 246
>gi|308064162|gb|ADO06049.1| putative ribonuclease N [Helicobacter pylori Sat464]
Length = 292
Score = 56.0 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/248 (16%), Positives = 94/248 (37%), Gaps = 19/248 (7%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSNYMQAHSGEMEALIFPNAPKLI-GAIKDFL 90
Query: 83 LQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW--YITRLISFGY 138
+ +S L A ++ + +A + R + + + I +
Sbjct: 91 ENFKKTDMTLGTFEEVSILVALVLFCENYRSIASKIFQA----KPRDYAHFKGKEIFLFW 146
Query: 139 VLLASVTLVIMSFVFVAIPL-ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
++ + + V + + +L ++L I + + + +F H
Sbjct: 147 GFGTTLVFLFALPLVVFFDIKIQVFFEDKNSSLLHVLRWIGTYAFFLILFTIPTNKVFKH 206
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F + V FT +SW V FT+Y++ TY +Y ++ + + ++Y+
Sbjct: 207 YF---------WVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYV 257
Query: 258 LGVFFILG 265
+ ++G
Sbjct: 258 SWLVILIG 265
>gi|159036400|ref|YP_001535653.1| ribonuclease BN [Salinispora arenicola CNS-205]
gi|157915235|gb|ABV96662.1| ribonuclease BN [Salinispora arenicola CNS-205]
Length = 307
Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 99/266 (37%), Gaps = 17/266 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
FD ++ AI + +A+ I+ ++F + ++ G + G + D
Sbjct: 25 FDHVWRAILLYNGRFATRLAAAIAYYGFFAMFALALVAYSVFGAILEGNDEVNAATADFF 84
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P P+ +A + + + + VEA+R S Y + +
Sbjct: 85 RENLP--FLDPVQ------IAESSGAVGAAGLTILVFTGISWVEAIRSSQRSLYGLDQQP 136
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + RLI G +L+ V L + + L ++ + + G + +
Sbjct: 137 GNLVVRRLIDLGVLLVVFVLLGVSVAAVDTLESLLRWLLQSAGSAG-----LTTISALLS 191
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + + +P + + + P V+ + + + HY+V + + Y +
Sbjct: 192 VLVNAVLATLLLAAVPRLRPSRVRLRPAVLLVAVGITLLNTIGRHYVVR-TERNPAYTVV 250
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
A + L++LY+ + GA L A+
Sbjct: 251 AGAVGLLLYLYLFNQLVLFGAALVAT 276
>gi|166154353|ref|YP_001654471.1| hypothetical protein CTL0387 [Chlamydia trachomatis 434/Bu]
gi|166155228|ref|YP_001653483.1| hypothetical protein CTLon_0383 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335606|ref|ZP_07223850.1| hypothetical protein CtraL_02205 [Chlamydia trachomatis L2tet1]
gi|165930341|emb|CAP03827.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165931216|emb|CAP06781.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 425
Score = 55.6 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 91/263 (34%), Gaps = 4/263 (1%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ I A + A +S L S P +VF L+ +L + +
Sbjct: 19 FIIKSILKAPKVLYHNGASKEACVLSYYGLFSCVPILVFFLRLSQYLFIS---LDWKEWL 75
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEM 125
+P+ A + G+ +S+ ++ + ++L LN+ +
Sbjct: 76 LLHFPDYKAPILAIIEAAYSTTSNIGVVLVSSFFVFCWAGILMLQSLEDGLNKIFCSGIT 135
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
++ + L++ + +I+ ++ I L + + + I+
Sbjct: 136 QASLKRLISYLVITLVSPMIFIIVCGSWIYITQILPINYPQLFSFSHSMAFIYIVSRLLP 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L+ L + FL +K + +W++ +F + YS Y L
Sbjct: 196 YALLYGILFCCYAFLSRVPTKKSAAFFAATIAGSAWILSQKIFFCLQLHLFNYSFTYGAL 255
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
++ + L+ LY+ + ++ G L
Sbjct: 256 VALPSFLLLLYLYAIIYLFGGAL 278
>gi|320533014|ref|ZP_08033758.1| ribonuclease BN-like family protein [Actinomyces sp. oral taxon 171
str. F0337]
gi|320134771|gb|EFW26975.1| ribonuclease BN-like family protein [Actinomyces sp. oral taxon 171
str. F0337]
Length = 340
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 89/262 (33%), Gaps = 16/262 (6%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-LAGFLG-AHQFVPTVIDVVFGAWP 71
A + G MA I+ + + SVF +V G + L LG V+D + P
Sbjct: 19 RAPIRYGTARGALMAGGIAYTGMFSVFAVLVIGVSMLMAMLGHYPTIRAAVVDSINSLLP 78
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVVE--M 125
VI ++ V + + ++ A Y + + L+I+L + +V M
Sbjct: 79 GVIDTGNGQGMVSVEQLTLTSALNLGSVLAAGAFIYSVISLMGTLKIALRAMFGLVNPVM 138
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R G++++ + LV V L+ + R W + +
Sbjct: 139 RPVVGQLANLAGFLVIVAGVLVTAVASVVTTTLSGSVGRSLGLPQSLTGTGAWVMTLLLS 198
Query: 186 MLALFIGLIFVHL---FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L L + P + + + G + VG T + +
Sbjct: 199 FLIDTGVLALLITMCGIRPPRRDLVQGCMLGAFALGVLRQVGTGAVGS-----VTRNPLL 253
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
A A+I +++L++ +L
Sbjct: 254 ASFAAIAVLILWLHLTSRVVLL 275
>gi|291279024|ref|YP_003495859.1| hypothetical protein DEFDS_0622 [Deferribacter desulfuricans SSM1]
gi|290753726|dbj|BAI80103.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 323
Score = 55.2 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 100/251 (39%), Gaps = 7/251 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVF-GANLAGFLGAHQFVPTVIDVVFGAWPEV 73
A + F ++ +S ++L +LS+FP I+ L ++ +I+ +
Sbjct: 10 AFQRFKQKKLSIHSSSLALYFILSIFPTIMITLLILNALFIKSKYYTIIINELNNLINNN 69
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ L A +IS L FSS ++ L S+N + + +S TRL
Sbjct: 70 KIIELLGLTLSNFKTIAISYGSISFLIVLLFSSIFIKGLFDSVNFIFNINPKKS--KTRL 127
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + +S V++ + + I + +F I + L ++ L
Sbjct: 128 L---LPIFSSSITVLLLIILILIKGVSILIFDYFGTNFYFNKIAYFYFKIIYFLFSWLIL 184
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ + K+ +++ F+ + + + ++ +V S Y+ +Y L++I+ ++
Sbjct: 185 ALTYYSILGKNIKLKNLIHASFFSLVLIYLISKIY-FIVVNKSVYNLLYGSLSTIILSIM 243
Query: 254 FLYMLGVFFIL 264
+L+ + +
Sbjct: 244 YLWFVFNILLF 254
>gi|183220924|ref|YP_001838920.1| putative ribonuclease BN [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911020|ref|YP_001962575.1| ribonuclease BN [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167775696|gb|ABZ93997.1| Ribonuclease BN [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167779346|gb|ABZ97644.1| Putative ribonuclease BN; putative membrane protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 794
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/152 (8%), Positives = 57/152 (37%), Gaps = 6/152 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-----AH 56
+ I ++ ++ F+++D + S ++ + ++++ P + L
Sbjct: 23 KRRLIIGIRVLLVSVHRFMKDDCLIIGSSLAYTTIVTLIPTLTVALALITVASGIHTRQA 82
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ V + + + P + + +++ A + + + + ++ + +L +
Sbjct: 83 EMVDEINSYLLRNNIQFDITPYLETLSDIIST-ATQIGAVGFVVFIFSATAVLRSLEKAF 141
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ + + R++ + F + + V+
Sbjct: 142 HIIWNIDLHRNFINKFVFYFFLISFGPLLFVV 173
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLF-THYIVTFS-TYSTMYAGLASIMTCLVFLY 256
+P K I + G T + ++ F Y+ +F+ +Y LA+I L+ +Y
Sbjct: 577 IIPNTKVPIKASSIGAAVTGLILILFFWGFINIYLTSFTEKTMLVYKALAAIPIALLAIY 636
Query: 257 MLGVFFILGAELNASMII 274
+ + + GAE+ A++
Sbjct: 637 SIALIILYGAEVTATLQF 654
>gi|224373034|ref|YP_002607406.1| ribonuclease BN [Nautilia profundicola AmH]
gi|223588583|gb|ACM92319.1| ribonuclease BN [Nautilia profundicola AmH]
Length = 266
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 86/247 (34%), Gaps = 13/247 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPI 78
+ + ++ +S + S+ P I+ + +F + + + I
Sbjct: 21 ITNEITLYSAALSFYTIFSLVPLILIVLTIFANTPFFAEFYSKLEHFISSNLLPTNQEVI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ + L +K + + + S + + + + E R+ + + +
Sbjct: 81 STYLKNFLTNSSK-MGVMGGFYILFTSILFFDNYETIIAKIF-SQEKRNLWEKIKLYWTM 138
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+ L + F+ + + L + N A L +++ +
Sbjct: 139 LTLFPIMFAAAMFMSIKLQFFLD---------KSSYTSWINFAKLAPFLIIWLTFFLSYK 189
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
K S L + ++ V +F +Y++ TY+T+Y ++ +M +++Y+
Sbjct: 190 MTL-QNEKTKSALIASLMVTATFFVSKNIFIYYVLINKTYTTIYGSISLLMFLFLWIYIN 248
Query: 259 GVFFILG 265
V ++ G
Sbjct: 249 WVIYVAG 255
>gi|297380568|gb|ADI35455.1| YihY family protein [Helicobacter pylori v225d]
Length = 288
Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/248 (16%), Positives = 94/248 (37%), Gaps = 19/248 (7%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFMSNYMQAHSGEMEALIFPNAPKLI-GAIKDFL 90
Query: 83 LQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW--YITRLISFGY 138
+ +S L A ++ + +A + R + + + I +
Sbjct: 91 ENFKKTDMTLGTFEEVSILVALVLFCENYRSIASKIFQA----KPRDYAHFKGKEIFLFW 146
Query: 139 VLLASVTLVIMSFVFVAIPL-ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
++ + + V + + +L ++L I + + + +F H
Sbjct: 147 GFGTTLVFLFALPLVVFFDIKIQVFFEDKNSSLLHVLRWIGTYAFFLILFTIPTNKVFKH 206
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F + V FT +SW V FT+Y++ TY +Y ++ + + ++Y+
Sbjct: 207 YF---------WVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYV 257
Query: 258 LGVFFILG 265
+ ++G
Sbjct: 258 SWLVILIG 265
>gi|29840307|ref|NP_829413.1| ribonuclease BN family protein [Chlamydophila caviae GPIC]
gi|29834656|gb|AAP05291.1| ribonuclease BN family protein [Chlamydophila caviae GPIC]
Length = 430
Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/251 (17%), Positives = 91/251 (36%), Gaps = 3/251 (1%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
V+ + A +S L S P +VF L+ L A+ + V F + E I +
Sbjct: 35 LVKNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFANLDWKEWLLVRFPDYKEPILAIV 94
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRISLNRAYRVVEMRSWYITRLISFG 137
GL + + ++ + +L LN+ +R + F
Sbjct: 95 A--AAHNATTSNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWTPISVQRLIAYFI 152
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
L++ + +I+ ++ I + +L + + I++ L +++ L +
Sbjct: 153 ITLVSPMIFIIVCGSWIYITQIMPVAYAKLFSLSHSITILYVFSRLTPYLFIYLALFCCY 212
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
FLP + + L + W+ +F YS Y L ++ + L+ LY+
Sbjct: 213 AFLPRVSVQKTAALIAALTAGTLWIFFQKVFFCLQFYLFNYSFTYGALVALPSFLLLLYL 272
Query: 258 LGVFFILGAEL 268
+ ++ G
Sbjct: 273 YAMLYLFGGAF 283
>gi|317011692|gb|ADU85439.1| putative ribonuclease N [Helicobacter pylori SouthAfrica7]
Length = 288
Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/248 (16%), Positives = 93/248 (37%), Gaps = 19/248 (7%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSNYMQAHSGEMEALIFPNAPKLI-GAIKDFL 90
Query: 83 LQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY--ITRLISFGY 138
+ L +S + A ++ + + + R + + I +
Sbjct: 91 ENFKKTDMTLGTLEEVSIVVALVLFCENYRSIAS---KIFD-AKPRDYVHCKGKEIFLFW 146
Query: 139 VLLASVTLVIMSFVFVAIPL-ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
++ + + V + + +L ++L I + + + +F H
Sbjct: 147 GFGTTLAFLFALPLVVFFDIKIQIFFEDKDSSLLHVLRWIGTYAFFLILFTIPTNKVFKH 206
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
F + V FT ISW V FT+Y++ TY +Y ++ + + ++Y+
Sbjct: 207 YF---------WVFLWVFFTSISWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYV 257
Query: 258 LGVFFILG 265
+ ++G
Sbjct: 258 SWLVILIG 265
>gi|213691701|ref|YP_002322287.1| ribonuclease BN [Bifidobacterium longum subsp. infantis ATCC 15697]
gi|213523162|gb|ACJ51909.1| ribonuclease BN [Bifidobacterium longum subsp. infantis ATCC 15697]
gi|320457792|dbj|BAJ68413.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 288
Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 105/264 (39%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
++ +V G +A+ ++ L + F + ++ G + G + +ID V P
Sbjct: 22 RVLDRYVSRRGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY-RVVEMRSWY 129
V +T L ++ A ++ LA +++ G + +LR ++ + + +
Sbjct: 82 GVADSFLTSSALGAMS-SALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATML 187
+ RL + ++ ++ + + + ++ + L +++ + T +
Sbjct: 141 VARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGIVLLEMTGFGTGV 200
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
AL L + L + + + G + ++ V L ++ ++ + M A A+
Sbjct: 201 ALNFALFMLLLRVVSHIKAGRFTILGALLGSLT-VSAMQLLGARLLAGASRNPMLAPFAA 259
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
++ L++ ++ +L A L A
Sbjct: 260 LIGVLIWFNLVAQVILLCAALIAE 283
>gi|311897919|dbj|BAJ30327.1| hypothetical protein KSE_45440 [Kitasatospora setae KM-6054]
Length = 305
Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/262 (16%), Positives = 91/262 (34%), Gaps = 35/262 (13%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ A+ + + + A+ ++ A LS P + A A H ++ D +
Sbjct: 45 LVGRAVSNLIRVNLLDNATRLAAQAFLSALPALFVIAVFAPATLKHSVTGSLRDQL---- 100
Query: 71 PEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGV---EALRISLNRAYRVVEMR 126
+ ++ Q+++ PA G + L A ++ AL+ RA+ + +
Sbjct: 101 --GLEGTAQQQVQQLMSTPADGAAQSFGVLGAVVTLASATALSRALQRVCERAWEMPKN- 157
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S L V ++ VF+ + + L P LG LL + + ++
Sbjct: 158 --------SARLALWRWVVWLLGWLVFLVVQVPLRKGFGAGPWLGVPLLFLASTGVWWWT 209
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGL 245
L +G + + +LPG + + V V Y+ +T +
Sbjct: 210 QHLLLG----------GRIRWYPLLPGAVLCGVGEVCLGVASQVYLPHAMTTSVEKFGPY 259
Query: 246 ASIMTCLVFLYMLGVFFILGAE 267
+ T L +L + A
Sbjct: 260 GVVFTALSWL-----IVLFSAV 276
>gi|291298424|ref|YP_003509702.1| ribonuclease BN [Stackebrandtia nassauensis DSM 44728]
gi|290567644|gb|ADD40609.1| ribonuclease BN [Stackebrandtia nassauensis DSM 44728]
Length = 307
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 96/264 (36%), Gaps = 10/264 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVF 67
FD + A E F D +++ IS A + F + ++ GFL + V D +
Sbjct: 24 FDHFWLAQERFFAVDAGRLSAAISYYAFFAAFSLALLALSVFGFLLKLPRLYTIVEDWLK 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I + + P G+ + AL + V+ +R S+ + + +
Sbjct: 84 ENLPIIGVETIAE------SAPTVGMIALGAL--VITGVSWVQTIRTSIRAVWLLEQEPG 135
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
I R I VL+A L++ + A+ L I+ G ++
Sbjct: 136 NPILRWIIDLLVLIALGILLVGTLAITAVAEVALAWLGDGNDNKALSTAIYYGGTVVGIV 195
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + LP I+ ++ I L + YI + + Y + +
Sbjct: 196 VNTVLVAALLSALPRLALPFKRIVYPALWVAIGLEGLKTLGSIYIKSAAHRPA-YQAVGT 254
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+FLY+ + + A+
Sbjct: 255 AVGLLIFLYLFNNMLMFASAWTAT 278
>gi|331699972|ref|YP_004336211.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
gi|326954661|gb|AEA28358.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
Length = 301
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 76/227 (33%), Gaps = 6/227 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
D + + + G +AS ++ + +++ P ++ + AGFL + V +
Sbjct: 23 WPALDHLRRTGRRYFAQRGNHLASAVAFTTVVAAVPLLMVLFSAAGFLLWLRPELVADLE 82
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V G +P +A + + + A + +I +AA + V LR +L + +
Sbjct: 83 SWVLGGFPAPVAAAVGPVVESAVTSRAP-VASIGTVAAVWAGKTWVTVLREALAAMWEMP 141
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R++ LLA + V S + L +
Sbjct: 142 PRPPASVRRVLRDLLSLLALIIAVSTSMALMVSATGGLGAVLRLVGLADHAAAYALVSGV 201
Query: 184 ATMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVL 227
+L IG + LP + ++ P + V+
Sbjct: 202 GVVLGWAIGWGVLVWLLGRLPGHTLPLRTVAPVAAIGALLIEALTVV 248
>gi|239620843|ref|ZP_04663874.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239516419|gb|EEQ56286.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 288
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 104/264 (39%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
++ +V G +A+ ++ L + F + ++ G + G + +ID V P
Sbjct: 22 RVLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY-RVVEMRSWY 129
V +T L ++ A ++ LA +++ G + +LR ++ + + +
Sbjct: 82 GVADSFLTSSALGTMS-SALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATML 187
+ RL + ++ ++ + + + ++ + L ++ + T +
Sbjct: 141 VARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGV 200
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
AL L + L + + + G + ++ V L ++ ++ + M A A+
Sbjct: 201 ALNFALFMLLLRVVSHIKAGRFTILGALLGSLT-VSAMQLLGARLLAGASRNPMLAPFAA 259
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
++ L++ ++ +L A L A
Sbjct: 260 LIGVLIWFNLVAQVILLCAALIAE 283
>gi|317481578|ref|ZP_07940614.1| ribonuclease BN-like family protein [Bifidobacterium sp.
12_1_47BFAA]
gi|316916938|gb|EFV38324.1| ribonuclease BN-like family protein [Bifidobacterium sp.
12_1_47BFAA]
Length = 288
Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 104/264 (39%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
++ +V G +A+ ++ L + F + ++ G + G + +ID V P
Sbjct: 22 RVLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY-RVVEMRSWY 129
V +T L ++ A ++ LA +++ G + +LR ++ + + +
Sbjct: 82 GVADSFLTSSALGAMS-SALTWTGLATLAIFWWTVTGWMNSLRHAVRTMFDDCGDELNIV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATML 187
+ RL + ++ ++ + + + ++ + L ++ + T +
Sbjct: 141 VARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGV 200
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
AL L + L + + + G + ++ V L ++ ++ + M A A+
Sbjct: 201 ALNFALFMLLLRVVSHIKAGRFTILGALLGSLT-VSAMQLLGARLLAGASRNPMLAPFAA 259
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
++ L++ ++ +L A L A
Sbjct: 260 LIGVLIWFNLVAQVILLCAALIAE 283
>gi|170783170|ref|YP_001711504.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157740|emb|CAQ02942.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
Length = 374
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/261 (16%), Positives = 110/261 (42%), Gaps = 9/261 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGAWP 71
+ G +A+ +S A+ +VF + G ++AG + A + +++ ++ GA P
Sbjct: 47 RVFLAYGAAGGPILAAGMSYQAVFAVFAALAVGFSVAGSVLADNPMLLDSLLSIIQGAVP 106
Query: 72 EVI-AKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + ++L A L I ++ + + + R S+ R + + +++
Sbjct: 107 GLFGPDGVIKDPQELLQSRAINLAGIIGSIGLLVTALGWLASTRDSVRRIFELPPPITFF 166
Query: 130 IT-RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ G L+ ++ +++ + + V L +V + + LL I GR L
Sbjct: 167 LLLKVKDLGLALVFALAMLLSAALSVVSTGLLGFVFRLMQVGEDSLLAIVVGRTVGLALV 226
Query: 189 LFI---GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + L + L + +L G + ++ V VL ++ ++ + + A
Sbjct: 227 LALDTAVLAGAYRILSGVRIPRTQLLQGALLGGVAMGVLKVL-GTALLGGASRNPLLASF 285
Query: 246 ASIMTCLVFLYMLGVFFILGA 266
A I+ L++ ++ ++ A
Sbjct: 286 AVIIGLLIWFNLICQVILICA 306
>gi|227546866|ref|ZP_03976915.1| ribonuclease BN [Bifidobacterium longum subsp. infantis ATCC 55813]
gi|227212828|gb|EEI80709.1| ribonuclease BN [Bifidobacterium longum subsp. infantis ATCC 55813]
Length = 288
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 105/264 (39%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
++ +V G +A+ ++ L + F + ++ G + G + +ID V P
Sbjct: 22 RVLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY-RVVEMRSWY 129
V +T L ++ A ++ LA +++ G + +LR ++ + + +
Sbjct: 82 GVADSFLTSSALGTMS-SALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATML 187
+ RL + ++ ++ + + + ++ + L +++ + T +
Sbjct: 141 VARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGIVLLEMTGFGTGV 200
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
AL L + L + + + G + ++ V L ++ ++ + M A A+
Sbjct: 201 ALNFALFMLLLRVVSHIKAGRFTILGALLGSLT-VSAMQLLGARLLAGASRNPMLAPFAA 259
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
++ L++ ++ +L A L A
Sbjct: 260 LIGVLIWFNLVAQVILLCAALIAE 283
>gi|148272147|ref|YP_001221708.1| putative ribonuclease [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830077|emb|CAN01006.1| conserved membrane protein, putative ribonuclease [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 369
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 107/261 (40%), Gaps = 9/261 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGAWP 71
+ + G +A+ +S A+ +VF + G ++AG + ++I ++ GA P
Sbjct: 42 RVLLAYGAAGGPILAAGMSYQAVFAVFAALAVGFSVAGSVLADNPALLDSLITLIQGAVP 101
Query: 72 EVIAK--PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + I D + + + I ++ + + + R S+ R + + +++
Sbjct: 102 GLFGEGGAIKDPQALLASDAVRATGIIGSIGLLVTALGWLASTRDSVRRIFELPPPTTFF 161
Query: 130 IT-RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ G L+ ++ +++ + + V L +V + LL I GR L
Sbjct: 162 LLLKVKDLGLALVFALAMLLSAALSVVSTGLLGFVFGLMQVGEDSLLAIVVGRTVGLALV 221
Query: 189 LFI---GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + L + L + +L G + ++ V VL ++ ++ + + A
Sbjct: 222 LALDTAVLAGAYRILSGVRIPRPQLLQGALLGGVAMGVLKVL-GTALLGGASRNPLLASF 280
Query: 246 ASIMTCLVFLYMLGVFFILGA 266
A I+ L++ ++ ++ A
Sbjct: 281 AVIIGLLIWFNLICQVILICA 301
>gi|302536385|ref|ZP_07288727.1| integral membrane protein [Streptomyces sp. C]
gi|302445280|gb|EFL17096.1| integral membrane protein [Streptomyces sp. C]
Length = 296
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 92/264 (34%), Gaps = 11/264 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + E +A+ I+ + L++FP I A + L + + + + + P
Sbjct: 26 WRSYERLDRVHWTRLAAAITFISFLALFPLITVAAAVGAALLSQEQLDKLQKSLAEQVPG 85
Query: 73 VIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY---RVVEMRSW 128
I+D++ L+ L A + ++ + + ++R L + E +
Sbjct: 86 -----ISDQLDLEGLVANAGTVGLVAGALLLFTGIGWIGSMRDCLRAVWEKDDEDEGNPF 140
Query: 129 Y-ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L + + V A + + P G ++ ++
Sbjct: 141 LRKGKDGLVLLGLGGAALASAAASVIGASAVGKSAELLGIPREGAGGALLRAAAFGVGVV 200
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ L+++ LP + ++ + + + +L + Y+ + S MY
Sbjct: 201 AAFLLLLYLLTLLPGVEPPRGRLVQAALIGAAGFELLKLLLSGYMRGVAAKS-MYGAFGV 259
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 260 PIALLLWISFTTKLLLFCAAWTAT 283
>gi|313680295|ref|YP_004058034.1| ribonuclease bn [Oceanithermus profundus DSM 14977]
gi|313153010|gb|ADR36861.1| ribonuclease BN [Oceanithermus profundus DSM 14977]
Length = 271
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 92/266 (34%), Gaps = 17/266 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-----GAHQFVPTV 62
+ + + + + A+ ++ AL S+ P ++ + G + Q
Sbjct: 6 LRRFLARLVRVYGQAHVPFFAASLAYYALFSLLPLLLLIVGVFGLMLESRPDLEQAFMLQ 65
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I+ + A + + + Q L A S L + +SN AL +L+ +
Sbjct: 66 IEHLAQNLFPTSAS-VGETVTQALRKGAASATLTSVLVLGWTASNFFAALSYALSLIF-- 122
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
L+A + L + +F LA+ V + P ++ +
Sbjct: 123 ----GGRGPGWRGRLLGLVAPLLLGLALLLFSLASLAVTMVLPYLPDGPWRGFVMGSLPW 178
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
AT+LA F+ ++ FLP + L W + L I + Y ++Y
Sbjct: 179 LATLLAFFV----IYRFLPYPPPGSLHALGAAFLASSVWTGLSRLLPGLISR-TRYESIY 233
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
LA + L Y+ + GA +
Sbjct: 234 GPLAGFLLALFGFYLAMWILLGGAAV 259
>gi|148824541|ref|YP_001289295.1| integral membrane protein [Mycobacterium tuberculosis F11]
gi|148723068|gb|ABR07693.1| conserved integral membrane protein [Mycobacterium tuberculosis
F11]
Length = 289
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 96/263 (36%), Gaps = 10/263 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + A F + +G A+ ++ + ++FP ++ G + GF A P ++ +
Sbjct: 20 LDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGF--ALSRRPELLTTLEE 77
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAY-RVVE 124
++ + +++ ++ ++ + AA+ + LR +L++ + V
Sbjct: 78 RIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALSQMWAHPVA 137
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAI---PLALAYVRKFFPALGNLLLIIWNGR 181
+ T+L ++ V +V + V P+A P I
Sbjct: 138 PAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFDEIFRGIS 197
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++L ++ ++ LP +++ + + + + + Y+ S
Sbjct: 198 VLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQIVL-RSPA 256
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF ++ +
Sbjct: 257 GAVFGPVLGLMVFAFVTAWLILF 279
>gi|121639264|ref|YP_979488.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991761|ref|YP_002646450.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|121494912|emb|CAL73395.1| Probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224774876|dbj|BAH27682.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
Length = 289
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 96/263 (36%), Gaps = 10/263 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + A F + +G A+ ++ + ++FP ++ G + GF A P ++ +
Sbjct: 20 LDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGF--ALSRRPELLTTLEE 77
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAY-RVVE 124
++ + +++ ++ ++ + AA+ + LR +L++ + V
Sbjct: 78 RIRTSVSGVVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALSQMWAHPVA 137
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAI---PLALAYVRKFFPALGNLLLIIWNGR 181
+ T+L ++ V +V + V P+A P I
Sbjct: 138 PAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFDEIFRGIS 197
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++L ++ ++ LP +++ + + + + + Y+ S
Sbjct: 198 VLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQIVL-RSPA 256
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF ++ +
Sbjct: 257 GAVFGPVLGLMVFAFVTAWLILF 279
>gi|15610471|ref|NP_217852.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15842932|ref|NP_337969.1| hypothetical protein MT3439 [Mycobacterium tuberculosis CDC1551]
gi|31794520|ref|NP_857013.1| integral membrane protein [Mycobacterium bovis AF2122/97]
gi|148663199|ref|YP_001284722.1| putative integral membrane protein [Mycobacterium tuberculosis
H37Ra]
gi|167967105|ref|ZP_02549382.1| putative conserved integral membrane protein [Mycobacterium
tuberculosis H37Ra]
gi|215405355|ref|ZP_03417536.1| putative integral membrane protein [Mycobacterium tuberculosis
02_1987]
gi|215413216|ref|ZP_03421917.1| putative integral membrane protein [Mycobacterium tuberculosis
94_M4241A]
gi|215428827|ref|ZP_03426746.1| putative integral membrane protein [Mycobacterium tuberculosis T92]
gi|215432304|ref|ZP_03430223.1| putative integral membrane protein [Mycobacterium tuberculosis
EAS054]
gi|218755122|ref|ZP_03533918.1| putative integral membrane protein [Mycobacterium tuberculosis GM
1503]
gi|219559402|ref|ZP_03538478.1| putative integral membrane protein [Mycobacterium tuberculosis T17]
gi|253800381|ref|YP_003033382.1| hypothetical protein TBMG_03385 [Mycobacterium tuberculosis KZN
1435]
gi|254233947|ref|ZP_04927272.1| hypothetical protein TBCG_03280 [Mycobacterium tuberculosis C]
gi|254365959|ref|ZP_04982004.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|254552443|ref|ZP_05142890.1| hypothetical protein Mtube_18663 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260188388|ref|ZP_05765862.1| hypothetical protein MtubCP_20508 [Mycobacterium tuberculosis
CPHL_A]
gi|260202596|ref|ZP_05770087.1| hypothetical protein MtubT4_21518 [Mycobacterium tuberculosis T46]
gi|260206697|ref|ZP_05774188.1| hypothetical protein MtubK8_20591 [Mycobacterium tuberculosis K85]
gi|289445014|ref|ZP_06434758.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289449028|ref|ZP_06438772.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289555615|ref|ZP_06444825.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|289571567|ref|ZP_06451794.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289576063|ref|ZP_06456290.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289747156|ref|ZP_06506534.1| integral membrane protein [Mycobacterium tuberculosis 02_1987]
gi|289752036|ref|ZP_06511414.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289755461|ref|ZP_06514839.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
gi|289759485|ref|ZP_06518863.1| integral membrane protein [Mycobacterium tuberculosis T85]
gi|289763527|ref|ZP_06522905.1| conserved integral membrane protein [Mycobacterium tuberculosis GM
1503]
gi|294995896|ref|ZP_06801587.1| hypothetical protein Mtub2_15693 [Mycobacterium tuberculosis 210]
gi|297635993|ref|ZP_06953773.1| hypothetical protein MtubK4_17797 [Mycobacterium tuberculosis KZN
4207]
gi|297732990|ref|ZP_06962108.1| hypothetical protein MtubKR_17952 [Mycobacterium tuberculosis KZN
R506]
gi|298526813|ref|ZP_07014222.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306777667|ref|ZP_07416004.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|306782393|ref|ZP_07420730.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|306786215|ref|ZP_07424537.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|306790583|ref|ZP_07428905.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|306795107|ref|ZP_07433409.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|306799302|ref|ZP_07437604.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|306805149|ref|ZP_07441817.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|306809337|ref|ZP_07446005.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|306969441|ref|ZP_07482102.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|306973787|ref|ZP_07486448.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|307081497|ref|ZP_07490667.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|307086104|ref|ZP_07495217.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|313660322|ref|ZP_07817202.1| hypothetical protein MtubKV_17952 [Mycobacterium tuberculosis KZN
V2475]
gi|2894245|emb|CAA17107.1| PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium
tuberculosis H37Rv]
gi|13883267|gb|AAK47783.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|31620116|emb|CAD95487.1| PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
gi|124599476|gb|EAY58580.1| hypothetical protein TBCG_03280 [Mycobacterium tuberculosis C]
gi|134151472|gb|EBA43517.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|148507351|gb|ABQ75160.1| putative conserved integral membrane protein [Mycobacterium
tuberculosis H37Ra]
gi|253321884|gb|ACT26487.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
gi|289417933|gb|EFD15173.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289421986|gb|EFD19187.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289440247|gb|EFD22740.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|289540494|gb|EFD45072.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289545321|gb|EFD48969.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289687684|gb|EFD55172.1| integral membrane protein [Mycobacterium tuberculosis 02_1987]
gi|289692623|gb|EFD60052.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289696048|gb|EFD63477.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
gi|289711033|gb|EFD75049.1| conserved integral membrane protein [Mycobacterium tuberculosis GM
1503]
gi|289715049|gb|EFD79061.1| integral membrane protein [Mycobacterium tuberculosis T85]
gi|298496607|gb|EFI31901.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308214003|gb|EFO73402.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308324942|gb|EFP13793.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308329174|gb|EFP18025.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|308333007|gb|EFP21858.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|308336629|gb|EFP25480.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|308340494|gb|EFP29345.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|308344365|gb|EFP33216.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308348303|gb|EFP37154.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|308353027|gb|EFP41878.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308356864|gb|EFP45715.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|308360820|gb|EFP49671.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|308364426|gb|EFP53277.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|323718008|gb|EGB27191.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|326905177|gb|EGE52110.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
gi|328460114|gb|AEB05537.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
Length = 289
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 96/263 (36%), Gaps = 10/263 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + A F + +G A+ ++ + ++FP ++ G + GF A P ++ +
Sbjct: 20 LDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGF--ALSRRPELLTTLEE 77
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAY-RVVE 124
++ + +++ ++ ++ + AA+ + LR +L++ + V
Sbjct: 78 RIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALSQMWAHPVA 137
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAI---PLALAYVRKFFPALGNLLLIIWNGR 181
+ T+L ++ V +V + V P+A P I
Sbjct: 138 PAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFDEIFRGIS 197
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++L ++ ++ LP +++ + + + + + Y+ S
Sbjct: 198 VLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQIVL-RSPA 256
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF ++ +
Sbjct: 257 GAVFGPVLGLMVFAFVTAWLILF 279
>gi|213581023|ref|ZP_03362849.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 66
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
F YI F +Y +Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 3 GFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 56
>gi|23464751|ref|NP_695354.1| hypothetical protein BL0125 [Bifidobacterium longum NCC2705]
gi|23325321|gb|AAN23990.1| narrowly conserved hypothetical membrane protein [Bifidobacterium
longum NCC2705]
Length = 288
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 103/264 (39%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
+ +V G +A+ ++ L + F + ++ G + G + +ID V P
Sbjct: 22 RVFDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY-RVVEMRSWY 129
V +T L ++ A ++ LA +++ G + +LR ++ + + +
Sbjct: 82 GVADSFLTSSALGAMS-SALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATML 187
+ RL + ++ ++ + + + ++ + L ++ + T +
Sbjct: 141 VARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGV 200
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
AL L + L + + + G + ++ V L ++ ++ + M A A+
Sbjct: 201 ALNFALFMLLLRVVSHIKAGRFTILGALLGSLT-VSAMQLLGARLLAGASRNPMLAPFAA 259
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
++ L++ ++ +L A L A
Sbjct: 260 LIGVLIWFNLVAQVILLCAALIAE 283
>gi|296444775|ref|ZP_06886738.1| ribonuclease BN [Methylosinus trichosporium OB3b]
gi|296257723|gb|EFH04787.1| ribonuclease BN [Methylosinus trichosporium OB3b]
Length = 105
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 26/54 (48%)
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A + Y + ++ Y L +++ ++++++ + ++GAEL+ M
Sbjct: 41 AIAAGVSFYALLAIFFNETYGALGAVIALMLWMWVSTIVLLVGAELDVEMERRR 94
>gi|215447650|ref|ZP_03434402.1| putative integral membrane protein [Mycobacterium tuberculosis T85]
Length = 290
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 96/263 (36%), Gaps = 10/263 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
D + A F + +G A+ ++ + ++FP ++ G + GF A P ++ +
Sbjct: 21 LDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGF--ALSRRPELLTTLEE 78
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAY-RVVE 124
++ + +++ ++ ++ + AA+ + LR +L++ + V
Sbjct: 79 RIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALSQMWAHPVA 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAI---PLALAYVRKFFPALGNLLLIIWNGR 181
+ T+L ++ V +V + V P+A P I
Sbjct: 139 PAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFDEIFRGIS 198
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++L ++ ++ LP +++ + + + + + Y+ S
Sbjct: 199 VLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQIVL-RSPA 257
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF ++ +
Sbjct: 258 GAVFGPVLGLMVFAFVTAWLILF 280
>gi|289644250|ref|ZP_06476338.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
gi|289505932|gb|EFD26943.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
Length = 335
Score = 53.7 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 79/262 (30%), Gaps = 33/262 (12%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + D A +++ L+ FPFI+ A L+ + + +
Sbjct: 65 DLASRLRQGDLINGAMNLAALILMMFFPFIIALAALSPL---RSGGAAEVIIRRMGLSQE 121
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEMRSW-YIT 131
A+ + G S L A + G+ +L ++ Y RV +R
Sbjct: 122 AAQAVERLFAPQDGTVRNGW---SILGALWLILGGL-SLATTVQSVYVRVFGLRPLGLRG 177
Query: 132 RLISFGYVLLASVTLV-IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
G++ V L + + + LLL +W G T+
Sbjct: 178 VPAQVGWLCGLIVFLAGTTTAGALLTGTIPGQIGYGLLNTAGLLLFLWAGTRILTL---- 233
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL----FTHYIVTFSTYSTMYAGLA 246
+ + P FT + V+ F+ + + Y +
Sbjct: 234 ------------GRLGWREVWPAAAFTTVGLTGLGVVGRLTFS---ASIVSNERNYGSIG 278
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
+ T L +L GV GA +
Sbjct: 279 VVFTILSWLIGFGVVLTGGAIV 300
>gi|293453827|ref|ZP_06664246.1| ribonuclease [Escherichia coli B088]
gi|291321953|gb|EFE61384.1| ribonuclease [Escherichia coli B088]
Length = 257
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 85/254 (33%), Gaps = 13/254 (5%)
Query: 39 VFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI 96
+ P ++ GF+ + + D + + + + +
Sbjct: 1 MIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLV 60
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRS------WYITRLISFGYVLLASVTLVIMS 150
A Y N + LR ++ R V RS +++ L F ++ + L++
Sbjct: 61 GLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTL 120
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF---IGLIFVHLFLPAAKSKI 207
+ A + L ++ + R+ +++F + ++ LP + +
Sbjct: 121 SITSVAGSAQQMIISALH-LNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRK 179
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+++ G I + V ++ T+ + + S A S++ + F Y + A
Sbjct: 180 KALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SPSGAAFGSVLGLMAFFYFFARLTLFCAA 238
Query: 268 LNASMIIYYWRKKP 281
A+ + P
Sbjct: 239 WIATAEYKDDPRMP 252
>gi|222824215|ref|YP_002575789.1| tRNA-processing ribonuclease BN [Campylobacter lari RM2100]
gi|222539437|gb|ACM64538.1| tRNA-processing ribonuclease BN [Campylobacter lari RM2100]
Length = 270
Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/254 (14%), Positives = 86/254 (33%), Gaps = 14/254 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVF 67
F ++ + +++ A+ +S +LS+ P + + + + + + + +++F
Sbjct: 3 FKNLFKILLALRDKEILNYAAALSFYTILSLIPLLFLCFWVFTQIPSFEMYQERIKNLIF 62
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ I I L + L I LA A S +N+
Sbjct: 63 TFLIPTQQELIIQYINTFLKN-SVNLGLIGLLAMALTSLAFFSGYDYVINKLLEEDSKNL 121
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W IS + L + + Y+ F + I N +
Sbjct: 122 W---HSISSYWTL---------ATLTPLGLGVSFYISGFIQKTLDDFNIALNFFEILPYV 169
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ + + K + ++L + W + ++F +Y V TY +Y +
Sbjct: 170 IIWALFFVSYSSSVSKKGDLKTLLISSFGASVIWYISKMIFVYYAVYNKTYLNVYGSFSV 229
Query: 248 IMTCLVFLYMLGVF 261
I+ +++Y+ +
Sbjct: 230 ILFFFLWIYISWII 243
>gi|144897642|emb|CAM74506.1| conserved hypothetical protein, membrane [Magnetospirillum
gryphiswaldense MSR-1]
Length = 224
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 10/209 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFVP 60
R V++ + A+ ++ MA ++ ++LLS+ P + A LA F
Sbjct: 4 RATAWQVWEFLRFAVRRGRDDGVSRMAGSLAFTSLLSLVPLFAIALAMLAAFPAFDSVRQ 63
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ F + I + +I + + A L + L+ + + + ++N +
Sbjct: 64 DLVSWSFRTFAPTIGDVVQLQINRFIDN-AGRLSAVGILSLVITAIMLLVTIEGTMNAIF 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS L+ + L + + A YV + L
Sbjct: 123 RVAKARSPLSKLLVYWT-------ALTLGPLLMGAALSLQGYVTAWSRWSVGKALTPVLA 175
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMS 209
T L + + + +P + +
Sbjct: 176 LPLPTTLTI-LAFAVMFAAVPNRRVAVRD 203
>gi|152967910|ref|YP_001363694.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151362427|gb|ABS05430.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 357
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/218 (15%), Positives = 71/218 (32%), Gaps = 16/218 (7%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL------GAHQFVPTVIDVVF 67
+ + E G +A I+ A S+FP + G + G + V +I V
Sbjct: 21 RVWQRYGEARGNVLAGGIAYFAFFSIFPALAVGLTVLGLVMRNTPEVRDVVVDNLIAGVN 80
Query: 68 GAWPEVIAKPITD------EILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY 120
P+++ + + I + + A + + A F+ G ++ +R S+ +
Sbjct: 81 QYAPDLVHRGVKPANGTGIYIDEFIQGTALTWSLVVSTATFLFTGLGWMDGMRESIRAVF 140
Query: 121 RVVEMR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LII 177
+ + RL +L+ + + V A Y+ + ++
Sbjct: 141 GDPPGGGNLVVVRLRDLLGMLVVGSGVALSVASVVVTNGAGGYLLSALGFEPSTWSRWLL 200
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ V LP A + +L G +
Sbjct: 201 GAAGFLVAFAIDTCTFLLVFRVLPNADVPLHDLLQGAV 238
>gi|322379028|ref|ZP_08053431.1| putative ribonuclease N [Helicobacter suis HS1]
gi|322380794|ref|ZP_08054900.1| ribonuclease N [Helicobacter suis HS5]
gi|321146798|gb|EFX41592.1| ribonuclease N [Helicobacter suis HS5]
gi|321148520|gb|EFX43017.1| putative ribonuclease N [Helicobacter suis HS1]
Length = 275
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/251 (16%), Positives = 84/251 (33%), Gaps = 32/251 (12%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+ AS +S +LS+ P ++F A + F+ V ++F P+ I +
Sbjct: 25 LFYYASSLSFYTILSLSPILLFIALV--FVSPFSQAFEVEKLLFPDSPDFIKVTRSFFKS 82
Query: 84 QVLAVPAKGLFTISALAAAYF---------SSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ A G+ IS +A A+F +S A E R ++ +
Sbjct: 83 FMQNNRALGIVEISFIALAFFLFCENYRYIASKIFNA------------EPRDYFTFKGK 130
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+V M + L + L + W G F+ L
Sbjct: 131 RIFVFWGFGTGIVFMLVLPCI--LIYDLKMQDLTQGWQLSFLHWLGSY-----VFFVLLF 183
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ + + T I W + F +Y++ TY +Y ++ + + +
Sbjct: 184 LIPTNKTFKRLSWSLVW--SFITSICWNLMKWGFVYYVLYNRTYHELYGSISILWFLMSY 241
Query: 255 LYMLGVFFILG 265
+Y+ + + G
Sbjct: 242 IYVSWLLLLFG 252
>gi|152965184|ref|YP_001360968.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151359701|gb|ABS02704.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 301
Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 91/274 (33%), Gaps = 8/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + D D + +++ ++ A +++ P +V L L + V + V
Sbjct: 10 LRALFADVRTRLQGHDLFLVSAGVTFYAAIALVPSLVVVVRLLAALIGPERVLDLAGSVG 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEM 125
A P E+++ L A + + AL A ++ E LR R
Sbjct: 70 RALPTAQG---AGEVVRGLVATAVDVGWVPALVALVPATVYGEGLRRGFARVSVRHPEPA 126
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ ++ L A L++ F+A+ ++ + F + + +
Sbjct: 127 PPAVRGRIGAWKVRLKALPLLLLAPAGFLAVLEVAPFLVRLFGSGVPGSALGVYIALNVD 186
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG- 244
L + L++V+ L + + + G T F ++ + G
Sbjct: 187 WLVVSPVLVYVYRVLGPVRPGWWAAIWGGYATGAFVSGFLQGFVLFLAIPVDLGAPFGGY 246
Query: 245 --LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + ++L++ + G + +
Sbjct: 247 TQVGGAVAVCLWLWVFTALTVYGYAVTLELQRRR 280
>gi|218517092|ref|ZP_03513932.1| putative ribonuclease protein [Rhizobium etli 8C-3]
Length = 52
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 42/52 (80%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF 52
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG L F
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALQAF 52
>gi|301167881|emb|CBW27466.1| putative transport-related membrane protein [Bacteriovorax marinus
SJ]
Length = 303
Score = 52.9 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 101/281 (35%), Gaps = 24/281 (8%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
+ + +I F + G +AS + LL++ PF + + G + + ++V
Sbjct: 6 YHLFKSSILLFNHKRGTTLASSSTFYILLTIVPFFLLLIRVVGIFIGDINSTQLKIFNLV 65
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+P+V + +T ++ ++ P + + A + + N + + E R
Sbjct: 66 ESFFPDVAPEILT-QVQGIVKGPLFAGGEFTVINFAILLISSLSFFNSIWNGLFLITEDR 124
Query: 127 SWYI-TRLISFGYVLLASVTLVIMSFVFVAI----------PLALAYVRKFFPALGNLLL 175
S+ T+ + +V+ ++ + + F ++ + Y+ FP+L ++
Sbjct: 125 SYLRFTKHLKGIFVIGVTIMCLTLFFFLPSLFFYSGQLFTNNTVVDYLATNFPSLLSVSD 184
Query: 176 IIWNGRIYATMLA---------LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+ + F++ + + + + + +VG
Sbjct: 185 YFSGFNYGFSYILKSNIFHAIIFTFFFAFLYRWFFSWRLSLKEAFISSLIFSCLVIVGKN 244
Query: 227 LFTHYIVTF-STYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
LF Y + Y +++ ++++Y FF GA
Sbjct: 245 LFWIYFIYVRDNLIKNYGDYYTLIVGVIWIYFTMSFFYFGA 285
>gi|255027456|ref|ZP_05299442.1| hypothetical protein LmonocytFSL_15893 [Listeria monocytogenes
FSL J2-003]
Length = 92
Score = 52.9 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAV 88
+ + + +L
Sbjct: 82 LEENLNNLLTQ 92
>gi|157738067|ref|YP_001490751.1| tRNA-processing ribonuclease BN [Arcobacter butzleri RM4018]
gi|157699921|gb|ABV68081.1| tRNA-processing ribonuclease BN [Arcobacter butzleri RM4018]
Length = 261
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 91/252 (36%), Gaps = 22/252 (8%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEV 73
A++ F +D A+ +S + S+ P I + H ++ T +F
Sbjct: 17 AVDSFFNDDTTYYAASLSFFTIFSILPIIALAIAIISNFPEFHAYMNTFTIYLFNFINPT 76
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+K I + + ++ K L + + + + +N+ + + R ++
Sbjct: 77 HSKDIIEALENYISNSNK-LGFLGIIYMIFVFVMFFKDYDYIVNKIHETI-RRPVILSFF 134
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
I + ++ + VI++FV + R + + +
Sbjct: 135 IYSLFFIIFPLFFVILTFVLSFLENDF-------------------LRNSISFIFTWFIF 175
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ K + L FT + LF +Y++ TY+T+Y LA+++
Sbjct: 176 FSLFKLSANKKIANYAALISSFFTLAVLSISKNLFIYYVIYNKTYTTIYGSLATLLFTFF 235
Query: 254 FLYMLGVFFILG 265
++Y+ + ++ G
Sbjct: 236 WIYVSWIIYLYG 247
>gi|315656372|ref|ZP_07909261.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|315492931|gb|EFU82533.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 390
Score = 52.5 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 92/261 (35%), Gaps = 12/261 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSV--FPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
A + +A IS +AL S+ ++ T+ V
Sbjct: 34 FMRAYLRYQNASANLLAGGISYTALFSMAGIVTLIIMTAQVMIFAFPLTSDTIFRDVNQW 93
Query: 70 WPEVIAKPITDEILQ--VLAVPAKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVEMR 126
P I ++ +A P+ T+ L + + V ALR+S+ + + +
Sbjct: 94 IPGAIQVDGQPGLIDPAAIASPSFTWGTLVVLVVSIMAGIRVVAALRVSIQTVFGLPQRP 153
Query: 127 SW-YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYA 184
+ L L+ + ++ S + + + +++ P L +I G
Sbjct: 154 GAGWKNTLRDVCMFLVLFLGGILASVLGTGSVVVVQTLQRRLPLALPAPSELINAGAFLL 213
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT-HYIVTFSTYSTMYA 243
T + + L F +L ++ + G + ++ A+ + Y+ ++ YA
Sbjct: 214 TGVLTTLILAFTLRYLALVRAPRRDLWIGT--GTLGFLSTALQMSGVYLA--ASVPPAYA 269
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
I+T ++++ +L F+
Sbjct: 270 PFTLILTIVLWVNVLCRLFLY 290
>gi|261416861|ref|YP_003250544.1| ribonuclease BN [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261373317|gb|ACX76062.1| ribonuclease BN [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302327826|gb|ADL27027.1| putative ribonuclease BN [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 321
Score = 52.5 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 94/262 (35%), Gaps = 13/262 (4%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP-EVIA 75
+ F+ G A+ ++ + L++V P ++ ++ +G F+ + +V +
Sbjct: 33 KSFLYYHGMTRAASLTYTTLVAVVPLLIMLTSITLAVGFGNFISDYLPIVIDMLNLDWPT 92
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT-RLI 134
+ I D + +P K L I A +L + N + R+ ++
Sbjct: 93 EQIMDIVENAEHIPIKKLGFIGAGGLFVTFILAFGSLETNFNVVWENKTSRTLIRQIKIY 152
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM-LALFIGL 193
+ ++ A+V + FV + + F ++ + Y+ +A + +
Sbjct: 153 TPFLLIGAAVVGMFAGFVNHVQNVLKVIIVDGFHFSPEVIKALITVFWYSAFHIAALLVI 212
Query: 194 IFVHLFLPAAK------SKIMSILPGVIFTWISWVVGAVLFTHYI----VTFSTYSTMYA 243
+ LPA ++ L ++ T +SW+ + + + S Y
Sbjct: 213 FIMLYALPARPAGHKPYTRRKLFLASMLSTLLSWLAINIYVKILMLIQTAMVTRMSIFYG 272
Query: 244 GLASIMTCLVFLYMLGVFFILG 265
LA I L L+ + + G
Sbjct: 273 SLAFIPLFLFLLFGVWSIILCG 294
>gi|296454473|ref|YP_003661616.1| ribonuclease BN [Bifidobacterium longum subsp. longum JDM301]
gi|296183904|gb|ADH00786.1| ribonuclease BN [Bifidobacterium longum subsp. longum JDM301]
Length = 288
Score = 52.1 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 104/264 (39%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
++ +V G +A+ ++ L + F + ++ G + G + +ID V P
Sbjct: 22 RVLDRYVSRRGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY-RVVEMRSWY 129
V +T L ++ ++ LA +++ G + +LR ++ + + +
Sbjct: 82 GVADSFLTSSALNTMS-STLTWTGLATLAMFWWTVTGWMNSLRHAVRSMFDDCGDELNIV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATML 187
+ RL + ++ ++ + + V ++ + L +++ + T +
Sbjct: 141 VARLRDTLAAIAIAILFILSTAAGTVSGGMVRRVLQWSGIASSSLPGILLLELTGFCTGV 200
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
AL L + L + A L G ++ V L ++T ++ + + A A+
Sbjct: 201 ALNFALFMLLLRVVAHIKAGRFTLIGASSGSLT-VSVMQLLGARLLTGASRNPLLAPFAA 259
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
++ LV+ ++ +L A L A
Sbjct: 260 LIGALVWFNLVAQVIMLCAALIAE 283
>gi|46205048|ref|ZP_00209679.1| COG1295: Predicted membrane protein [Magnetospirillum
magnetotacticum MS-1]
Length = 157
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 28/59 (47%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI + F + +A+ ++ A+L++FP + ++ G + + T ++ + G
Sbjct: 98 DIALRLYQEFGNDRILLVAAGVTFYAILALFPAVAALVSIYGAVADPSTINTHLNELRG 156
>gi|213420053|ref|ZP_03353119.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 184
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 60/167 (35%), Gaps = 3/167 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I Q +A K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRPKVY 138
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + + +L L S + L+L + + N+L I+
Sbjct: 139 SFAV-YWMILTLGPLLAGASLAISSYLLSLRWASDLNTVIDNVLRIL 184
>gi|284993218|ref|YP_003411773.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284066464|gb|ADB77402.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 245
Score = 52.1 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 47/243 (19%), Positives = 90/243 (37%), Gaps = 15/243 (6%)
Query: 39 VFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA 98
+ P ++ +L L + + V + D + P + P L+ LA GL +
Sbjct: 1 MVPLLLVAFSLTALLTSAERVRELSDRLAQLLPPELGAP---GALRTLAEAGTGLDLLGF 57
Query: 99 LAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ A S E LR +L R + + + RL++ VL + + PL
Sbjct: 58 VLALVPLSFYGEGLRRALLRFTPRQDRLTGWRGRLLALPLVLATPLLM---------YPL 108
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
LA L Y+ + AL + L++ + A + +++ GV+FT
Sbjct: 109 LLAASAMVDLTEQGSALGTVAVGYYSVLFALTVPLLWGFGVVAAGDLRWPALVSGVLFTA 168
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGL---ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
F ++ + GL +++ ++L++L + I G L S+
Sbjct: 169 ACLSGFLQGFAIFLALPLALGAPFGGLTVVGAVVAISLWLFLLHLVVIAGWLLTQSLDGR 228
Query: 276 YWR 278
R
Sbjct: 229 LRR 231
>gi|304413602|ref|ZP_07395046.1| ribonuclease BN-like domain-containing hypothetical protein
[Candidatus Regiella insecticola LSR1]
gi|304283693|gb|EFL92087.1| ribonuclease BN-like domain-containing hypothetical protein
[Candidatus Regiella insecticola LSR1]
Length = 314
Score = 52.1 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 91/264 (34%), Gaps = 12/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A++ F + G + I+ ++LS+ P ++ + GF + +I+ + +
Sbjct: 25 IIRAVDRFNDRLGSQFGAAITYFSVLSLIPMLMLSFAVTGFFLASNPFLLTELIEKIVNS 84
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEMRS 127
+ I+ + A Y + + +L RA V E S
Sbjct: 85 VSDPTLATTLKNIVNTAVKQRTTVGLTGLSIALYSGISWIGSLLREAIRAQSRDVWERSS 144
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y + F ++ + L+I + A + + L ++
Sbjct: 145 DDKEKFYFRYIKDFISLIGLLIALIITLSLTSIAGSAQVMIINTLGLNGIEWLRPLMTLV 204
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A + I++ LP + ++L G + + + + + T + ++ S
Sbjct: 205 TLAISITANCLLFIWILWILPRHHPQKKALLRGTLIAALGFEIIKFVMTMMLPYLTS-SP 263
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
A I+ + F Y +
Sbjct: 264 SGAVFGPILGLMAFFYFFARLTLF 287
>gi|256832055|ref|YP_003160782.1| ribonuclease BN [Jonesia denitrificans DSM 20603]
gi|256685586|gb|ACV08479.1| ribonuclease BN [Jonesia denitrificans DSM 20603]
Length = 315
Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 90/252 (35%), Gaps = 7/252 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGAWP 71
A+ + +G +A I+ +AL S+ + G L F Q + + + + P
Sbjct: 34 RAVRRYQLANGSILAGGITYTALFSLSAALTIGVTLLMRVFGNNEQLRDQIFESLDQSVP 93
Query: 72 EVIAKPITDEIL---QVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYR-VVEMR 126
+I ++ + P L + I+ + + + A R SL+ + V +
Sbjct: 94 GLINTGDNGGLVRPEDLTVSPTVTLTSAIAVGVLLFTALRVMAAFRKSLHAMFGMVTARK 153
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ I +L + +V + + + +A+ ++ +I G I +
Sbjct: 154 NKPIDKLRELIGFAVIAVGVFVSAVATIAVSAVGRWMSGQLVGGELWSALIPVGSILVGV 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + + L K + G + VL T + +T + ++A
Sbjct: 214 LVDAGMFVLLMRVLAGLKMPRKDLFAGAAVAAAGLGLLRVLGTSVVAGSATSNPLFASAT 273
Query: 247 SIMTCLVFLYML 258
I+T LV++
Sbjct: 274 VIITILVWINTS 285
>gi|284042220|ref|YP_003392560.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283946441|gb|ADB49185.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 286
Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 87/264 (32%), Gaps = 24/264 (9%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ ++ V+ A + ++ P +V GA ++I
Sbjct: 30 ELVRACLDRLVQMQFVDRAVALGSLTFTALVPLMVIANAYLP--GADSAADSLIRRFH-- 85
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
++ D + + A P IS + A + + + +L R Y
Sbjct: 86 ----LSGSTADIVRETFARPDTTRGAISVVGIALLIGSSL-SFTRALQRVYENA------ 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL + G+ SV + + A VR + L L+ + +L L
Sbjct: 135 -WRLQARGWA--GSVAGLKWLAGIIVWATLFAGVRSWIEDLTGPLVSLIVALGGGAVLWL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASI 248
F + + A + ++P + T + ++ Y+ + + + Y +
Sbjct: 192 FTPWVLL-----AQRVDWHRLVPSAVLTSVGMTGLSIASVVYMPDSIAESADRYGSIGIA 246
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ + +L G + A + A +
Sbjct: 247 IALVSWLVGAGFVLVACAAVGAVL 270
>gi|304390852|ref|ZP_07372804.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|304325735|gb|EFL92981.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
Length = 368
Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 92/261 (35%), Gaps = 12/261 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSV--FPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
A + +A IS +AL S+ ++ T+ V
Sbjct: 13 FMRAYLRYQNASANLLAGGISYTALFSMAGIVTLIIMTAQVMIFAFPLTSDTIFRDVNQW 72
Query: 70 WPEVIAKPITDEILQ--VLAVPAKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVEMR 126
P I ++ +A P+ T+ L + + V ALR+S+ + + +
Sbjct: 73 IPGAIQVDGQPGLIDPAAIASPSFTWGTLVVLVVSIMAGIRVVAALRVSIQTVFGLPQRP 132
Query: 127 SW-YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYA 184
+ L L+ + ++ S + + + +++ P L +I G
Sbjct: 133 GAGWKNTLRDVCMFLVLFLGGILASVLGTGSVVVVQTLQRRLPLALPAPSELINAGAFLL 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT-HYIVTFSTYSTMYA 243
T + + L F +L ++ + G + ++ A+ + Y+ ++ YA
Sbjct: 193 TGVLTTLILAFTLRYLALVRAPRRDLWIGT--GTLGFLSTALQMSGVYLA--ASVPPAYA 248
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
I+T ++++ +L F+
Sbjct: 249 PFTLILTIVLWVNVLCRLFLY 269
>gi|288817646|ref|YP_003431993.1| ribonuclease BN [Hydrogenobacter thermophilus TK-6]
gi|288787045|dbj|BAI68792.1| ribonuclease BN [Hydrogenobacter thermophilus TK-6]
gi|308751244|gb|ADO44727.1| ribonuclease BN [Hydrogenobacter thermophilus TK-6]
Length = 256
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/240 (14%), Positives = 94/240 (39%), Gaps = 16/240 (6%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
AS ++ S ++ + I+F + LA FL F +I+ +PE + I + +
Sbjct: 23 HASSLTYSFIMVLGSLILFSSFLASFLPFFDF-NKIINYAVLLFPEQAERVILEILKVYQ 81
Query: 87 AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
+ + + + A +FS + ++L + ++ + + VLL ++ L
Sbjct: 82 HRTSGSILSFTV--AYFFSVSFSKSLYRAFLYVLSEARSEKEWVFWVKTPALVLLYTLCL 139
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
++ F+ + + L + + +L ++ + + K
Sbjct: 140 SLLFFLNSFLKVYLGNYNAYL-------------FYFINLLTFWVLIFLTYTLFLPRKYS 186
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ G + + + ++ LF+ ++V + +Y+ + SI+ +++ + + GA
Sbjct: 187 FKDVYVGAMLSSCALLLFNKLFSAFVVKLVALNPLYSFMGSILIFFIWVNLSFSVLLAGA 246
>gi|227494749|ref|ZP_03925065.1| membrane protein ribonuclease BN family protein [Actinomyces
coleocanis DSM 15436]
gi|226831749|gb|EEH64132.1| membrane protein ribonuclease BN family protein [Actinomyces
coleocanis DSM 15436]
Length = 433
Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 98/266 (36%), Gaps = 18/266 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGA 69
+ A+ + + G +A IS A+ S+ + G + + H + + + A
Sbjct: 69 VGRALARYGLKRGHLLAGGISYVAMFSITAAVAIGWTIFMAVLGHNEPLRVSTLTAIDKA 128
Query: 70 WPEVIAKP------ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
P ++ P + + +L P I+ ++ +S + AL+ SL + +V
Sbjct: 129 MPGLLITPDDPNNGLLNPDSLILKSPFTIAGFIATVSLFLSASRVMAALKTSLWSMFGIV 188
Query: 124 EMRS-WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG-R 181
+ + ++ + L ++ +++ + + V V + G +
Sbjct: 189 HLPDKPVVAQVRDYAGFFLLTLGVLVTAALGVLTSTLSTLVIEALGISGAFSTFLLQASS 248
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST- 240
+ L + + F+ + ++ G + + A Y+ T + S
Sbjct: 249 LLIAFLVDAVVFAILVRFIAGVRVPKWDLIWGSL-----MLGVASGAVRYLGTSAVGSVN 303
Query: 241 --MYAGLASIMTCLVFLYMLGVFFIL 264
+ A A+++T ++++ ++ ++
Sbjct: 304 DPVLAAGAAVITLMLWINLIARLVLM 329
>gi|213584053|ref|ZP_03365879.1| hypothetical protein SentesTyph_23670 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 181
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 35/107 (32%), Gaps = 2/107 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 59 LIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMN 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ + + + A Y N + LR ++
Sbjct: 119 VSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAI 165
>gi|213580432|ref|ZP_03362258.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 164
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 6/146 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS--- 127
I I Q +A K + + A + + A+ +LN +R R
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKRTRPKVY 138
Query: 128 -WYITRLISFGYVLLASVTLVIMSFV 152
+ + +I LLA +L I S++
Sbjct: 139 SFAVYWMILTLGPLLAGASLAISSYL 164
>gi|312132446|ref|YP_003999785.1| membrane protein [Bifidobacterium longum subsp. longum BBMN68]
gi|311773109|gb|ADQ02597.1| Hypothetical Membrane protein [Bifidobacterium longum subsp. longum
BBMN68]
Length = 266
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 104/263 (39%), Gaps = 8/263 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
++ +V G +A+ ++ L + F + ++ G + G + +ID V P
Sbjct: 1 MLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIPG 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY-RVVEMRSWYI 130
V +T L ++ A ++ LA +++ G + +LR ++ + + + +
Sbjct: 61 VADSFLTSSALGTMS-SALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIVV 119
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATMLA 188
RL + ++ ++ + + + ++ + L ++ + T +A
Sbjct: 120 ARLRDTLAAIAIAILFILSTVAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGVA 179
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L + L + + + G + ++ V L ++ ++ + M A A++
Sbjct: 180 LNFALFILLLRVVSHIKAGRFTILGALLGSLT-VSAMQLLGARLLAGASRNPMLAPFAAL 238
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L++ ++ +L A L A
Sbjct: 239 IGVLIWFNLVAQVILLCAALIAE 261
>gi|284992777|ref|YP_003411331.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284066022|gb|ADB76960.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 343
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 98/277 (35%), Gaps = 7/277 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
FD + A + G MA+ ++ L + P ++ A++ G + G + +
Sbjct: 47 FDHLARAGGRYQRTQGDLMAAGVTYFVFLGLVPVLLLVASVIGLVLAGNALLQQELYATI 106
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEM 125
+P I E+ + A + I + Y ++ LR+ + R + V+
Sbjct: 107 RETFPGPTGAEIVGELRGAVG-SAGVVGVIGLVGFFYAGLRAMDKLRLGMERIWKGRVDD 165
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ L + + ++ + + A ++ + L + +
Sbjct: 166 PEFLRDNLQDLLALAAFGLAGLLSLGLTGGVTQATSWALQALGLDDAPGLFLLTAALGLG 225
Query: 186 MLAL--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + +++ +P+ + +LPG +F + ++ + Y+ S S +
Sbjct: 226 LAVVTDVVVFLWLLRVVPSTSYPLRRLLPGALFGAAGFEAMKLIGSLYLSLISG-SVTAS 284
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ L+++ ++ F A A++ +
Sbjct: 285 AFGGAVGILIWINVVCRFAFFTAAWTATLPQVQGDAR 321
>gi|207092956|ref|ZP_03240743.1| putative ribonuclease N [Helicobacter pylori HPKX_438_AG0C1]
Length = 236
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPL-ALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + I + ++ + + V + + +L ++L I + +
Sbjct: 81 FKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILF 140
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ +F H F + V FT +SW V FT+Y++ TY +Y ++
Sbjct: 141 TIPTNKVFKHYF---------WVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSI 191
Query: 248 IMTCLVFLYMLGVFFILG 265
+ + ++Y+ + ++G
Sbjct: 192 LWFLMSWVYVSWLVILIG 209
>gi|189439006|ref|YP_001954087.1| hypothetical protein BLD_0143 [Bifidobacterium longum DJO10A]
gi|189427441|gb|ACD97589.1| Hypothetical membrane protein [Bifidobacterium longum DJO10A]
Length = 266
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 104/263 (39%), Gaps = 8/263 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
++ +V G +A+ ++ L + F + ++ G + G + +ID V P
Sbjct: 1 MLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIPG 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY-RVVEMRSWYI 130
V +T L ++ A ++ LA +++ G + +LR ++ + + + +
Sbjct: 61 VADSFLTSSALGTMS-SALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIVV 119
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATMLA 188
RL + ++ ++ + + + ++ + L ++ + T +A
Sbjct: 120 ARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGVA 179
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L + L + + + G + ++ V L ++ ++ + M A A++
Sbjct: 180 LNFALFMLLLRVVSHIKAGRFTILGALLGSLT-VSAMQLLGARLLAGASRNPMLAPFAAL 238
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L++ ++ +L A L A
Sbjct: 239 IGVLIWFNLVAQVILLCAALIAE 261
>gi|86741435|ref|YP_481835.1| ribonuclease BN [Frankia sp. CcI3]
gi|86568297|gb|ABD12106.1| ribonuclease BN [Frankia sp. CcI3]
Length = 320
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 88/262 (33%), Gaps = 29/262 (11%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ D E D A +++ L+ FPF++ A L+ +I G
Sbjct: 51 VGDLASRLREADLINRAMNLAAMILMIFFPFVITLAALSPL--RQGGAADIIIARMGLSH 108
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-RVVEMRSWYI 130
+ + ++ + + T + + G +L S+ Y RV ++ + +
Sbjct: 109 DAAMA-----VERLFTPRSGTVLTGWTVLGVLWLIIGGLSLAASVQSIYVRVFRLKPFGL 163
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L++ L + ++ + A+ G + + G + +LALF
Sbjct: 164 RGLLAQVGWLCGLIFFLVATTSLGAL------------LTGTVAGQVCYGLVATVILALF 211
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA----VLFTHYIVTFSTYSTMYAGLA 246
+ + L + P +FT I + F+ + Y G+
Sbjct: 212 LWVGV--RVLTIGRMSWRDSWPTALFTTIGLTGLGVVSRLAFS---ASIVANERSYGGIG 266
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
+ T L +L GV I G +
Sbjct: 267 VVFTILSWLIGFGVVLIGGVIV 288
>gi|304570626|ref|YP_830618.2| ribonuclease BN [Arthrobacter sp. FB24]
Length = 366
Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 99/266 (37%), Gaps = 9/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
A +H+ + G MA+ I S+ + G +LAG + G + VI + A
Sbjct: 76 MRAFQHYNLQHGPLMAAGIGFRMFFSITGLLATGLSLAGLVLSGQPALLDQVIKSIAKAA 135
Query: 71 PE----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV-VEM 125
P + + D + I+A + + + +R + ++
Sbjct: 136 PGLMKVDGGEGLVDPYQLLNPSGLGWAAVIAAAVTVFTALGWISGIRDGVRGMMQLGPRG 195
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + L G +LL V LV+ + + A +V + + +
Sbjct: 196 MNPVLQILRDAGILLLLGVALVLSAAASLIFGTAAGWVTEQLQLDPVMAWPLTTAIKVGV 255
Query: 186 MLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
LAL ++ + + K ++L G I + + V +F+ ++ + + + A
Sbjct: 256 PLALGWVTALIMFRLAAGLKLSRQALLEGTILSAVGTTVL-QIFSTELLASAGRNPILAP 314
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
A I+ L++ ++ +++ A +A
Sbjct: 315 FAIIIGLLIWFNLVSQVYLVSAAWSA 340
>gi|322691509|ref|YP_004221079.1| hypothetical protein BLLJ_1320 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456365|dbj|BAJ66987.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 266
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 104/263 (39%), Gaps = 8/263 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
++ +V G +A+ ++ L + F + ++ G + G + +ID V P
Sbjct: 1 MLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIPG 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAY-RVVEMRSWYI 130
V +T L ++ A ++ LA +++ G + +LR ++ + + + +
Sbjct: 61 VADSFLTSSALGAMS-SALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIVV 119
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATMLA 188
RL + ++ ++ + + + ++ + L ++ + T +A
Sbjct: 120 ARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGVA 179
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L + L + + + G + ++ V L ++ ++ + M A A++
Sbjct: 180 LNFALFMLLLRVVSHIKAGRFTILGALLGSLT-VSAMQLLGARLLAGASRNPMLAPFAAL 238
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L++ ++ +L A L A
Sbjct: 239 IGVLIWFNLVAQVILLCAALIAE 261
>gi|169349833|ref|ZP_02866771.1| hypothetical protein CLOSPI_00571 [Clostridium spiroforme DSM 1552]
gi|169293401|gb|EDS75534.1| hypothetical protein CLOSPI_00571 [Clostridium spiroforme DSM 1552]
Length = 246
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 53/129 (41%)
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
+ + I + ++ + + + I + + F + FL K I +
Sbjct: 90 ILIRIKAIIMFISLIIGLILLAFINYFTRSIIVIGIGFLVLFYFFYRFLSFEKRFITYGI 149
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
G +FT I ++ + F ++I ++ Y +Y LASI+ L+ +Y++ G LN
Sbjct: 150 VGSLFTCIGIMIVGIGFIYFIDNYTRYDVLYGPLASIVVLLISIYLISSIIYFGYCLNHE 209
Query: 272 MIIYYWRKK 280
Y + +
Sbjct: 210 YTKYVKKPE 218
>gi|195953003|ref|YP_002121293.1| ribonuclease BN [Hydrogenobaculum sp. Y04AAS1]
gi|195932615|gb|ACG57315.1| ribonuclease BN [Hydrogenobaculum sp. Y04AAS1]
Length = 258
Score = 50.2 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/255 (18%), Positives = 89/255 (34%), Gaps = 15/255 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + + F A +S S ++S+ P I+ + I +P
Sbjct: 4 LINFVLDFFRLKILYHAGALSFSFIMSIVPLILGAGFFLHMF-LENKIDNYIYHFSAVFP 62
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ K I D L I AL + YFS+ ++ L ++ + E +
Sbjct: 63 DFTNKIIKDI--SYLEQKRLKAGIIGALVSLYFSTGFIKDLDYAIALMWDKKEAKR---- 116
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + L+ VF + L Y+ F L L N F
Sbjct: 117 ------IEVMYFLYLMFFVVVFTGGSVYLFYISLMFKHLNLPLEFTKNLSYLLFFTVFFY 170
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ + F+ + + + +L ++ ++ + T YI S +YA L I+
Sbjct: 171 SVYSI--FIQSKNIRKIYVLAVSAVESLALLLLKYIITVYISHLLIKSIVYASLWLIIAF 228
Query: 252 LVFLYMLGVFFILGA 266
L+++ L +LGA
Sbjct: 229 LIWIDWLMASLLLGA 243
>gi|311896451|dbj|BAJ28859.1| putative ribonuclease [Kitasatospora setae KM-6054]
Length = 314
Score = 49.8 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 89/273 (32%), Gaps = 12/273 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
Y F G +A ++ L++FP + +A + V + D V P
Sbjct: 23 YLVYLLFDAVQGNRLAGAVTFFGFLALFPLLTVALAIALATLSDSRVHQLQDKVTEQLPG 82
Query: 73 VIAKP-ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYI 130
+ + + V + + V+ +R ++ +R+ E + +
Sbjct: 83 LADSLDLNAMVANAGTVGLVSGLLLLVSGLGW-----VDTMRGAVRTVWRLPAEGGNVLL 137
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L +L + + + G + +G + +
Sbjct: 138 VKLRDCLVLLGLGLVCLASLAGSALATTLAHRLADGLGLDGGAARWLLSGLGFLIAVGAD 197
Query: 191 IGLIFVHLFLPAAK---SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ L+F +L P + ++L G + + + + +L + Y+ + + S Y
Sbjct: 198 L-LLFAYLLGPFPQIAGQSRRALLEGALIGAVGFELLKLLLSSYLGSVAGRSL-YGAFGV 255
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ L+++ + + A A R++
Sbjct: 256 PVALLLWIDFVARLLMYCAAWTALADPEEARRR 288
>gi|269955786|ref|YP_003325575.1| ribonuclease BN [Xylanimonas cellulosilytica DSM 15894]
gi|269304467|gb|ACZ30017.1| ribonuclease BN [Xylanimonas cellulosilytica DSM 15894]
Length = 288
Score = 49.8 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 96/257 (37%), Gaps = 6/257 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANL--AGFLGAHQFVPTVIDVVFGAWP 71
+ + + + I+ +AL S+F + G ++ A V++ V P
Sbjct: 15 RTVAWYGARNAALLCGGIAYAALFSLFAGLTIGWSVFSASLGRNDDLRDAVLEQVDTWMP 74
Query: 72 EVIAKPITDEIL--QVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEM-RS 127
++ + D I Q++ A ++ +A+ + + + ALR S+ + + ++
Sbjct: 75 GLVGEGPDDLINPDQLVLPSAWTWASVVAAVVLLFSALRVMAALRSSVRSMFDLPATGQN 134
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ R+ L V ++ + VA V + + + G ++
Sbjct: 135 LVLVRVWQLAGFALLGVAVLASAGASVAAGAVGQVVESWLGGSELVAWAVRLGAAVVGIV 194
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ + + A+ + ++ G + L T +V + + + A A+
Sbjct: 195 LDAAVVVMIVTVVAGARPRRRDLIWGSLAAGAVAGALRWLGTTIVVGSAGANRLLAPFAA 254
Query: 248 IMTCLVFLYMLGVFFIL 264
I+T LV + ++ +L
Sbjct: 255 IITILVLINVVARILLL 271
>gi|320537961|ref|ZP_08037868.1| cyclic nucleotide-binding domain protein [Treponema phagedenis
F0421]
gi|320145214|gb|EFW36923.1| cyclic nucleotide-binding domain protein [Treponema phagedenis
F0421]
Length = 437
Score = 49.8 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 87/252 (34%), Gaps = 3/252 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ F +Y F+ D + S + + LLS P + + H T
Sbjct: 24 KKGFYDFVQKMYITFMAFITNDLATITSAGAYNFLLSAVPIFILVLIIL-LQVLHANPKT 82
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSN-GVEALRISLNRAY 120
++ + + I I+D + + V F + + ++ S +++ S+ Y
Sbjct: 83 ILAFLQRSQIISIPLGISDLVAYIGNVKNFAFFESALIVFIFWMSRRFFASIQHSIRMIY 142
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + +I + + +V + A + +L++ N
Sbjct: 143 KKQIKIEPFKVSIIVIIGEIALVIFIVFSIIILTAGNAVFKTELPKRIFSPSNILVVKNA 202
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
YA + L I L ++ F+P + + +S++V + + + +
Sbjct: 203 IRYAPIFFLLIFLFTIYYFMPPVRPTKTNAFFCAATCSLSFLVLKISLNF-LHDRAKFDF 261
Query: 241 MYAGLASIMTCL 252
+Y ++ + L
Sbjct: 262 VYGFFSNFILLL 273
>gi|167755878|ref|ZP_02428005.1| hypothetical protein CLORAM_01395 [Clostridium ramosum DSM 1402]
gi|167704817|gb|EDS19396.1| hypothetical protein CLORAM_01395 [Clostridium ramosum DSM 1402]
Length = 236
Score = 49.8 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 17/230 (7%)
Query: 37 LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI 96
+S+ P A A L + + + ++ I+ L L +I
Sbjct: 1 MSIIPICSLFAFFASILNVD------LGTLEQLLKNYLTPEFSNIIIASLKSSHITLSSI 54
Query: 97 SALA-AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
L + + S G+ L + R+ I +L+ I FV +
Sbjct: 55 IILFISLFVVSRGINQLYGISKNLFPSAHQRNIIIEQLLMLLKT--------IAVFVLLL 106
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ +++ + N I+ G +Y L FI L ++ +P I I+ G
Sbjct: 107 LIISILTIIPLINYFINFKDILVLGDLYL-FLVFFIILFLLYKIIPDVHVHIFDIVKGAF 165
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ I ++ Y + Y+++Y LAS++ ++ ++ +G
Sbjct: 166 CSSILMLILLSALEFYFS-IADYTSVYGPLASVVVIMISFSLIAETIFIG 214
>gi|86152513|ref|ZP_01070718.1| ribonuclease BN [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85843398|gb|EAQ60608.1| ribonuclease BN [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 268
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 97/266 (36%), Gaps = 23/266 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFTILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V+F + I L + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKN-SVNLGIVGLIAMAFTSLAFFSGYDFVINRI 111
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
E + + + IS + LL V L L L++ F I
Sbjct: 112 -TKNEPKGLWQS--ISSYWTLLTLVPL----------GLGLSFYISGFIQQTLDDYKIGF 158
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ GL F+ K + S+ W +G LF +Y+V TY+
Sbjct: 159 NFFEILPFVIIWGLFFISYSSSVHKGTLKSLSLVSFGAGTIWYIGKNLFVYYVVYNKTYA 218
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
++Y ++I+ +++Y+ + ++ G
Sbjct: 219 SVYGSFSTILFFFIWIYISWIIYLFG 244
>gi|153951615|ref|YP_001397697.1| YihY family protein [Campylobacter jejuni subsp. doylei 269.97]
gi|152939061|gb|ABS43802.1| YihY family protein [Campylobacter jejuni subsp. doylei 269.97]
Length = 276
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 96/266 (36%), Gaps = 23/266 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFTILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V+F + I L + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKN-SVNLGIVGLVAMAFTSLAFFSGYDFVINRI 111
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
E + + + IS + LL V L L L++ F I
Sbjct: 112 -TKNEPKGLWQS--ISSYWTLLTLVPL----------GLGLSFYISGFIQQTLDDYKIGF 158
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ GL F K + S+ W +G LF +Y+V TY+
Sbjct: 159 NFFEILPFVIIWGLFFTSYSSSVHKGTLKSLALVSFGAGAIWYIGKNLFVYYVVYNKTYA 218
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
++Y ++I+ +++Y+ + ++ G
Sbjct: 219 SVYGSFSTILFFFIWIYISWIIYLFG 244
>gi|88799312|ref|ZP_01114890.1| probable Ribonuclease BN [Reinekea sp. MED297]
gi|88777851|gb|EAR09048.1| probable Ribonuclease BN [Reinekea sp. MED297]
Length = 262
Score = 49.5 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 88/252 (34%), Gaps = 23/252 (9%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVIDVVFGAWPEVIAKP--- 77
AS ++L+ L ++ P + + Q + ++ PE
Sbjct: 21 HIGQHASVLTLTTLFALVPLVSGVLWFLSQVPSVQSQLIEQFDVLLSYLIPEQALSWRSR 80
Query: 78 ITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ + V + + +L V + +L+ +++ + R R + +
Sbjct: 81 ADEWVQDVSSLQGYSAILLFGSLIFL------VNKVDKTLHWVFQIEQGRG--RRRWLHY 132
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+V+ A + +I++ V + + LG LL + G ++ +++ L+ V
Sbjct: 133 LWVMPALMMTLIVAMTLVLLLQIM---------LGTGLLALLPGVNLTSVPVMWLLLMAV 183
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ + + ++ F +T +S ++ +++ L++
Sbjct: 184 YRLSSRGMITWRDNAAVSLGVTVLFLFLKFGFAWLYITLPNWSIVFGVFSAVPLFLLWTQ 243
Query: 257 MLGVFFILGAEL 268
M F+ GA +
Sbjct: 244 MAWSIFLYGAVM 255
>gi|283956606|ref|ZP_06374085.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 1336]
gi|283791855|gb|EFC30645.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 1336]
Length = 268
Score = 49.5 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 98/266 (36%), Gaps = 23/266 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFTILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V+F + I L + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKN-SVNLGIVGLIAMAFTSLAFFSGYDFVINRI 111
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ E + + + IS + LL V L L L++ F I
Sbjct: 112 VK-NEPKGLWQS--ISSYWTLLTLVPL----------GLGLSFYISGFIQQTLDDYKIGF 158
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ GL F+ K + S+ W +G LF +Y+V TY+
Sbjct: 159 NFFEILPFVIIWGLFFISYSSSVHKGTLRSLALVSFGAGAIWYIGKNLFVYYVVYNKTYA 218
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
++Y ++I+ +++Y+ + ++ G
Sbjct: 219 SVYGSFSTILFFFIWIYISWIIYLFG 244
>gi|254822852|ref|ZP_05227853.1| hypothetical protein MintA_23184 [Mycobacterium intracellulare ATCC
13950]
Length = 340
Score = 49.1 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A ++ + + A +LPG + W + Y+ +
Sbjct: 175 GLALAAVVINALICLVAFRVTTARALTYRQVLPGAVAAAFIWQMLQWFGAGYVAHTVKRA 234
Query: 240 TMYAG-LASIMTCLVFLYMLGVFFILGAELNASMI 273
+ A ++ L FL++ V +L AE+N ++
Sbjct: 235 SATNSVFALVLGALAFLFLASVALVLCAEVNVVLV 269
>gi|284926436|gb|ADC28788.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni
IA3902]
Length = 268
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 97/266 (36%), Gaps = 23/266 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFNILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V+F + I L + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKN-SVNLGIVGLIAMAFTSLAFFSGYDFVINRI 111
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
E + + + IS + LL V L L L++ F I
Sbjct: 112 -TKNEPKGLWQS--ISSYWTLLTLVPL----------GLGLSFYISGFIQQTLDDYKIGF 158
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ GL F+ K + S+ W +G LF +Y+V TY+
Sbjct: 159 NFFEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGAIWYIGKNLFVYYVVYNKTYA 218
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
++Y ++I+ +++Y+ + ++ G
Sbjct: 219 SVYGSFSTILFFFIWIYISWIIYLFG 244
>gi|15605943|ref|NP_213320.1| hypothetical protein aq_453 [Aquifex aeolicus VF5]
gi|14916761|sp|O66760|Y453_AQUAE RecName: Full=Uncharacterized protein aq_453
gi|2983114|gb|AAC06719.1| putative protein [Aquifex aeolicus VF5]
Length = 257
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 55/268 (20%), Positives = 113/268 (42%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R+ +F ++DA + D AS ++L LL + P IVF A L+ +LG +
Sbjct: 4 LRKLLNALFLCLWDAFRY----DYSYHASALTLQLLLVLAPLIVFLAALSSYLGFIKL-D 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +V+ +P+ I + + L ++ L + +FS N V+ + SL +Y
Sbjct: 59 LLEEVLREHFPKQTHAVIAEILKAKEQGKTASLISL--LVSYFFSVNFVKKIAKSL--SY 114
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + + + + LV+ SFV ++ +F +G L + +
Sbjct: 115 VVERK----KRDVHEVFFWVGFPILLVLFSFVTGMSFYVSILLKTYFKGIGFLSNLASSL 170
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +++L+ I ++ +S+L + + +FT Y V S
Sbjct: 171 PLLFLVISLYWSFI--------KINRKISLLISSFLVYFFASLLQYIFTLYTVYVFKGSV 222
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L++I+ ++L + F++GA
Sbjct: 223 LYGSLSTIVLFFLWLNFNFLLFLVGARF 250
>gi|57238083|ref|YP_179333.1| ribonuclease BN [Campylobacter jejuni RM1221]
gi|86150320|ref|ZP_01068546.1| YihY family protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596516|ref|ZP_01099753.1| YihY family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|121613677|ref|YP_001000886.1| YihY family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|148926212|ref|ZP_01809897.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni
CG8486]
gi|167005798|ref|ZP_02271556.1| YihY family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|218562824|ref|YP_002344603.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|57166887|gb|AAW35666.1| ribonuclease BN [Campylobacter jejuni RM1221]
gi|85839145|gb|EAQ56408.1| YihY family protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|87249082|gb|EAQ72043.1| YihY family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|88191357|gb|EAQ95329.1| YihY family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360530|emb|CAL35327.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|145845383|gb|EDK22476.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315058645|gb|ADT72974.1| Ribonuclease BN [Campylobacter jejuni subsp. jejuni S3]
gi|315927270|gb|EFV06615.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929800|gb|EFV08966.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
305]
Length = 268
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 97/266 (36%), Gaps = 23/266 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFTILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V+F + I L + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKN-SVNLGIVGLIAMAFTSLAFFSGYDFVINRI 111
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
E + + + IS + LL V L L L++ F I
Sbjct: 112 -TKNEPKGLWQS--ISSYWTLLTLVPL----------GLGLSFYISGFIQQTLDDYKIGF 158
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ GL F+ K + S+ W +G LF +Y+V TY+
Sbjct: 159 NFFEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGTIWYIGKNLFVYYVVYNKTYA 218
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
++Y ++I+ +++Y+ + ++ G
Sbjct: 219 SVYGSFSTILFFFIWIYISWIIYLFG 244
>gi|222874667|gb|EEF11798.1| predicted protein [Populus trichocarpa]
Length = 78
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
LP A+ ++ G + T + + VG L Y+ S ++ Y S++ ++++Y
Sbjct: 2 LPNARIAWRDVMMGSVITALLFAVGKRLIGLYLGN-SAVASSYGAAGSVVALMLWIYYSA 60
Query: 260 VFFILGAEL 268
F GAEL
Sbjct: 61 QIFFFGAEL 69
>gi|223937053|ref|ZP_03628961.1| cell divisionFtsK/SpoIIIE [bacterium Ellin514]
gi|223894334|gb|EEF60787.1| cell divisionFtsK/SpoIIIE [bacterium Ellin514]
Length = 919
Score = 49.1 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 27/149 (18%)
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+S+ ++L V+ ++ F+FV + L L L + + IG+
Sbjct: 65 LSYIFLLTFGVSSYVLPFLFVFVGLG--------CFLEMLSYVRRRWAWTLVIFFCCIGM 116
Query: 194 IFVHL-FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY-AGLASIMTC 251
++ +L K+ ++PG I + Y Y + +
Sbjct: 117 FDLYRDYLEGLHKKLR-VMPGGIIGV---------------NLNNYIFNYFGTTGATIIF 160
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ LY + + F+ +L A + R K
Sbjct: 161 MM-LYFISILFLTNFQLGAWIRALVNRDK 188
>gi|293390888|ref|ZP_06635222.1| tRNA-processing ribonuclease BN [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951422|gb|EFE01541.1| tRNA-processing ribonuclease BN [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 135
Score = 49.1 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/118 (11%), Positives = 44/118 (37%), Gaps = 2/118 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAWPEV 73
+ F + A +++ S +L++ P I+ ++ V + + +F +
Sbjct: 11 FWQRFNQNKLTQAAGYLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFTNFAPS 70
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I + + +K + + ++ + + ++ +LN + R ++
Sbjct: 71 AGDVVGQYIDEFVNN-SKQMSAVGIISLIVVALMLINSIDRTLNGIWHDTSTRPYFYL 127
>gi|111020942|ref|YP_703914.1| ribonuclease [Rhodococcus jostii RHA1]
gi|110820472|gb|ABG95756.1| possible ribonuclease [Rhodococcus jostii RHA1]
Length = 333
Score = 49.1 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 6/180 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
F+++ G +A+ I+ +S+FP ++ + + GF+ G + +ID +P
Sbjct: 23 VTYKFLDDQGVYLAALIAYYGFISLFPLLLLLSTVLGFVLSGHPELQQDIIDSALSQFPV 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ A + GL I + A Y A + ++N A+ V R
Sbjct: 83 IGADLADP---HRIGGGVTGLV-IGLVGALYGGLGVALASQNAMNTAWSVPRNMRPDPIR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
G +LL ++ L ++ VA A ++ F L L I N I+ L
Sbjct: 139 GRLRGLLLLGTIGLAVLGTAAVAAVGAATHLSGSFTVLLMLAAITINSAIFILAFRLATA 198
>gi|283954770|ref|ZP_06372286.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 414]
gi|283793610|gb|EFC32363.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 414]
Length = 268
Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 96/266 (36%), Gaps = 23/266 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M+++F I+ + +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKKFFTIL--------SNLRDKEILNYAAALSFYTILSLIPILFICFSIFTQISSFKAYY 52
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V+F + I L + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDIVATYIDTFLKN-SVNLGIVGLIAMAFTSLAFFSGYDFVINRI 111
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ W + IS + LL V L L L++ F I
Sbjct: 112 TKNDPKGLW---QSISSYWTLLTLVPL----------GLGLSFYISGFIQQTLDDYKIGF 158
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ GL F+ K + S+ W +G LF +Y+V TY+
Sbjct: 159 NFFEILPFVIIWGLFFISYSSSIHKGTLKSLTLVSFGAGAIWYIGKNLFVYYVVYNKTYA 218
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
++Y ++I+ +++Y+ + ++ G
Sbjct: 219 SVYGSFSTILFFFIWIYISWIIYLFG 244
>gi|86151142|ref|ZP_01069358.1| YihY family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|157415475|ref|YP_001482731.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 81116]
gi|85842312|gb|EAQ59558.1| YihY family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|157386439|gb|ABV52754.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 81116]
gi|307748117|gb|ADN91387.1| ribonuclease BN [Campylobacter jejuni subsp. jejuni M1]
gi|315932356|gb|EFV11299.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
327]
Length = 268
Score = 48.7 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 97/266 (36%), Gaps = 23/266 (8%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFV 59
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFTILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V+F + I L + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKN-SVNLGIVGLIAMAFTSLAFFSGYDFVINRI 111
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
E + + + IS + LL V L L L++ F I
Sbjct: 112 -TKNEPKGLWQS--ISSYWTLLTLVPL----------GLGLSFYISGFIQQTLDDYKIGF 158
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ GL F+ K + S+ W +G LF +Y+V TY+
Sbjct: 159 NFFEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGAIWYIGKNLFVYYVVYNKTYA 218
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
++Y ++I+ +++Y+ + ++ G
Sbjct: 219 SVYGSFSTILFFFIWIYISWIIYLFG 244
>gi|282850972|ref|ZP_06260346.1| conserved domain protein [Lactobacillus gasseri 224-1]
gi|282557924|gb|EFB63512.1| conserved domain protein [Lactobacillus gasseri 224-1]
Length = 85
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 29/62 (46%)
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ +P ++ I I +L + G ++ + A + S V ++R++ N+ Y V +
Sbjct: 14 YLELIFPSQVSSLIMPIINALLKKHSSGFISLGIVIAIWSLSCLVNSVRLAANKIYGVDK 73
Query: 125 MR 126
+
Sbjct: 74 KK 75
>gi|116609794|gb|ABK02518.1| ribonuclease BN [Arthrobacter sp. FB24]
Length = 329
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 99/266 (37%), Gaps = 9/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
A +H+ + G MA+ I S+ + G +LAG + G + VI + A
Sbjct: 39 MRAFQHYNLQHGPLMAAGIGFRMFFSITGLLATGLSLAGLVLSGQPALLDQVIKSIAKAA 98
Query: 71 PE----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV-VEM 125
P + + D + I+A + + + +R + ++
Sbjct: 99 PGLMKVDGGEGLVDPYQLLNPSGLGWAAVIAAAVTVFTALGWISGIRDGVRGMMQLGPRG 158
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + L G +LL V LV+ + + A +V + + +
Sbjct: 159 MNPVLQILRDAGILLLLGVALVLSAAASLIFGTAAGWVTEQLQLDPVMAWPLTTAIKVGV 218
Query: 186 MLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
LAL ++ + + K ++L G I + + V +F+ ++ + + + A
Sbjct: 219 PLALGWVTALIMFRLAAGLKLSRQALLEGTILSAVGTTVL-QIFSTELLASAGRNPILAP 277
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
A I+ L++ ++ +++ A +A
Sbjct: 278 FAIIIGLLIWFNLVSQVYLVSAAWSA 303
>gi|325123560|gb|ADY83083.1| putative ribonuclease (Rbn) [Acinetobacter calcoaceticus PHEA-2]
Length = 180
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 28/49 (57%)
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ F++Y +Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 1 MSNFTSYEIIYGAFAAVPIFLLWIFLSWNIILLGVEVSFALTAFHSGKE 49
>gi|313672829|ref|YP_004050940.1| ribonuclease bn [Calditerrivibrio nitroreducens DSM 19672]
gi|312939585|gb|ADR18777.1| ribonuclease BN [Calditerrivibrio nitroreducens DSM 19672]
Length = 401
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 95/264 (35%), Gaps = 5/264 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVP 60
+ F + + V D + I+ ALLS P ++ + FL Q V
Sbjct: 5 DIFKRFLLNLVLTFFYMVSNDILLFNAAITYYALLSFIPMLLIFGLVLRKIFLYFPQSVR 64
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ ++ + + + G L+ S+ + ++ + +
Sbjct: 65 YFEEMMGTV--DIEMLEYVNILGLIKESNVAGFGIFGILSIFLTSTIFLRSINTVFKKIF 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R+ ++ + L+ F V ++I+ VA+ ++ + + ++I
Sbjct: 123 RIKSVKETILHSLMPFFVYFSFLVIIIILLLSKVALLFLENFLVFYVDIDLSYPILILEK 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +L L + FL + + + + + + F Y S Y+
Sbjct: 183 FSFLPLLFFLTLLSISYHFLSLRRLSWIDSIKLSLLFGFTIYCFNIAF-KYFYNISFYNA 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
+Y L+S++ L ++Y+ + F+
Sbjct: 242 VYGALSSLIITLAYVYIFFLSFLF 265
>gi|190360102|sp|P0C6V7|R1AB_BEV RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:
Full=ORF1ab polyprotein; Contains: RecName:
Full=Non-structural protein 1; Short=nsp1; Contains:
RecName: Full=Non-structural protein 2; Short=nsp2;
Contains: RecName: Full=Non-structural protein 3;
Short=nsp3; Contains: RecName: Full=3C-like serine
proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName:
Full=nsp4; AltName: Full=p27; Contains: RecName:
Full=Non-structural protein 5; Short=nsp5; Contains:
RecName: Full=Non-structural protein 6; Short=nsp6;
Contains: RecName: Full=Non-structural protein 7;
Short=nsp7; Contains: RecName: Full=Non-structural
protein 8; Short=nsp8; Contains: RecName:
Full=Non-structural protein 9; Short=nsp9; Contains:
RecName: Full=RNA-directed RNA polymerase; Short=Pol;
Short=RdRp; AltName: Full=nsp11; AltName: Full=p100;
Contains: RecName: Full=Helicase; Short=Hel; AltName:
Full=nsp12; AltName: Full=p67; Contains: RecName:
Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp13;
Contains: RecName: Full=Non-structural protein 14;
Short=nsp14; Contains: RecName: Full=Uridylate-specific
endoribonuclease; AltName: Full=NendoU; AltName:
Full=nsp15; Contains: RecName: Full=Putative 2'-O-methyl
transferase; AltName: Full=nsp16
Length = 6857
Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 17/120 (14%)
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
+I +VFV I + + L ++ + Y LF+ +I V +
Sbjct: 3057 IISPYVFVFIVVIFTVIFLILIRLYIVMYSYFKVFTYVVFKLLFVNIIMVLFVV-----C 3111
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ ++PGV+F W+ +V+F Y+ S + L + Y+L F++G
Sbjct: 3112 LPPLVPGVVFVLALWLCDSVMFLLYLAFLSLF------------ILPWFYVLFFLFMVGG 3159
>gi|190360131|sp|P0C6F3|R1A_BEV RecName: Full=Replicase polyprotein 1a; Short=pp1a; AltName:
Full=ORF1a polyprotein; Contains: RecName:
Full=Non-structural protein 1; Short=nsp1; Contains:
RecName: Full=Non-structural protein 2; Short=nsp2;
Contains: RecName: Full=Non-structural protein 3;
Short=nsp3; Contains: RecName: Full=3C-like serine
proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName:
Full=nsp4; AltName: Full=p27; Contains: RecName:
Full=Non-structural protein 5; Short=nsp5; Contains:
RecName: Full=Non-structural protein 6; Short=nsp6;
Contains: RecName: Full=Non-structural protein 7;
Short=nsp7; Contains: RecName: Full=Non-structural
protein 8; Short=nsp8; Contains: RecName:
Full=Non-structural protein 9; Short=nsp9; Contains:
RecName: Full=Non-structural protein 10; Short=nsp10
gi|83628256|gb|ABC26008.1| replicase polyprotein 1a [Equine torovirus]
Length = 4569
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 17/120 (14%)
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
+I +VFV I + + L ++ + Y LF+ +I V +
Sbjct: 3057 IISPYVFVFIVVIFTVIFLILIRLYIVMYSYFKVFTYVVFKLLFVNIIMVLFVV-----C 3111
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ ++PGV+F W+ +V+F Y+ S + L + Y+L F++G
Sbjct: 3112 LPPLVPGVVFVLALWLCDSVMFLLYLAFLSLF------------ILPWFYVLFFLFMVGG 3159
>gi|15835027|ref|NP_296786.1| hypothetical protein TC0409 [Chlamydia muridarum Nigg]
gi|270285193|ref|ZP_06194587.1| hypothetical protein CmurN_02048 [Chlamydia muridarum Nigg]
gi|270289212|ref|ZP_06195514.1| hypothetical protein CmurW_02108 [Chlamydia muridarum Weiss]
gi|301336589|ref|ZP_07224791.1| hypothetical protein CmurM_02100 [Chlamydia muridarum MopnTet14]
gi|7190450|gb|AAF39265.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 425
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 93/263 (35%), Gaps = 4/263 (1%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ A + + A +S L S P +VF L+ +L + +
Sbjct: 19 FIIKSFLKAPKVLYYNEASKEACILSYYGLFSCIPILVFFLRLSQYLFIS---LDWKEWL 75
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-EALRISLNRAYRVVEM 125
+P+ + + + +S+ ++ + ++L LN+ +
Sbjct: 76 LLHYPDYETPILAIFEAAYSTTSSIVVVLVSSFFVFCWAGILMLQSLEDGLNKIFCPGIT 135
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
++ + L++ + +I+ ++ I + + + + I+
Sbjct: 136 QASLKRLISYLIITLISPMIFIIVCGSWIYITQIMPISYPKLFSFSHAMACIYVISRILP 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L+ GL + FLP ++ S L +WV+ +F + YS Y L
Sbjct: 196 YALLYGGLFCCYAFLPRVPTQKSSSLLAAAIAGSAWVISQKIFFCLQLYIFNYSFTYGAL 255
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
++ + L+ LY+ + ++ G L
Sbjct: 256 VALPSFLLLLYLYSIIYLFGGAL 278
>gi|315655714|ref|ZP_07908612.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii ATCC 51333]
gi|315489778|gb|EFU79405.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii ATCC 51333]
Length = 368
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 90/261 (34%), Gaps = 12/261 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSV--FPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
A + +A IS +AL S+ ++ T+ V
Sbjct: 13 FMRAYLRYQNASANLLAGGISYTALFSMAGIVTLIIMTAQVMIFAFPLTSDTIFRDVNQW 72
Query: 70 WPEVIAKPITDEILQ--VLAVPAKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVEMR 126
P I ++ +A P+ T+ L + + V ALR+S+ + + +
Sbjct: 73 IPGAIQVDGQPGLIDPAAIATPSFTWGTLVVLVVSIMAGIRVVAALRVSIQTVFGLPQRP 132
Query: 127 SW-YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYA 184
+ L L+ + ++ S + + + +++ P L +I G
Sbjct: 133 GAGWKNTLRDVCMFLVLFLGGILASVLGSGSVVVVQTLQRRLPLALPAPSGLINAGAFLL 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT-HYIVTFSTYSTMYA 243
T + L F +L ++ + G + ++ A+ + Y+ + YA
Sbjct: 193 TGALTTLILAFTLRYLALVRAPRRDLWIGT--GTLGFLSTALQMSGVYLA--GSVPPAYA 248
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
I+T ++++ +L F+
Sbjct: 249 PFTLILTIVLWVNVLCRLFLY 269
>gi|298345295|ref|YP_003717982.1| ribonuclease BN family protein [Mobiluncus curtisii ATCC 43063]
gi|298235356|gb|ADI66488.1| ribonuclease BN family protein [Mobiluncus curtisii ATCC 43063]
Length = 368
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 90/261 (34%), Gaps = 12/261 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSV--FPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
A + +A IS +AL S+ ++ T+ V
Sbjct: 13 FMRAYLRYQNASANLLAGGISYTALFSMAGIVTLIIMTAQVMIFAFPLTRDTIFRDVNQW 72
Query: 70 WPEVIAKPITDEILQ--VLAVPAKGLFTISALAAAYFSS-NGVEALRISLNRAYRVVEMR 126
P I ++ +A P+ T+ L + + V ALR+S+ + + +
Sbjct: 73 IPGAIQVDGQPGLIDPAAIASPSFTWGTLVVLVVSIMAGIRVVAALRVSIQTVFGLPQRP 132
Query: 127 SW-YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYA 184
+ L L+ + ++ S + + + +++ P L +I G
Sbjct: 133 GAGWKNTLRDVCMFLVLFLGGILASVLGSGSVVVVQTLQRRLPLALPAPSGLINAGAFLL 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT-HYIVTFSTYSTMYA 243
T + L F +L ++ + G + ++ A+ + Y+ + YA
Sbjct: 193 TGALTTLILAFTLRYLALVRAPRRDLWIGT--GTLGFLSTALQMSGVYLA--GSVPPAYA 248
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
I+T ++++ +L F+
Sbjct: 249 PFTLILTIVLWVNVLCRLFLY 269
>gi|226363239|ref|YP_002781021.1| hypothetical protein ROP_38290 [Rhodococcus opacus B4]
gi|226241728|dbj|BAH52076.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 333
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 16/225 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
F+++ G +A+ I+ +S+FP ++ + + GF+ G +ID +P
Sbjct: 23 VTYKFLDDQGVYLAALIAYYGFISLFPLLLLLSTVLGFVLSGRPDLQQDIIDSALSQFPV 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ A + GL I + A Y A + ++N A+ V R
Sbjct: 83 IGADLADP---HRIGGGVTGLV-IGLVGALYGGLGVALACQNAMNTAWSVPRNMRPDPIR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
G +LL ++ L ++ VA A ++ F L L I N +
Sbjct: 139 GRLRGLLLLGTIGLAVLGTAAVAAVGAATHLSGSFSVLLMLAAITINS----------VI 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ A + + PG + + W V +Y+ +
Sbjct: 189 FVLAFRLATARPLSVADVAPGAVAAAVLWQVLQSFGAYYVSKVVS 233
>gi|87306652|ref|ZP_01088799.1| probable ribonuclease BN [Blastopirellula marina DSM 3645]
gi|87290831|gb|EAQ82718.1| probable ribonuclease BN [Blastopirellula marina DSM 3645]
Length = 255
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 6/158 (3%)
Query: 110 EALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
A + Y E + R++ Y L A V ++ + FV VA L ++F
Sbjct: 82 RAFSRIFDLEYPSSETWRQLLWRIV--FYRLRAYVFVMALGFVGVAALAFLFAWKQFLIR 139
Query: 170 LGNL--LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
G+ L I + A+++ ++ + V +P L G + + W + +
Sbjct: 140 NGSAWGLSIFLPTQYAASLMFNWLLITLVFWQVPRTNVSFWHALRGALLCTVMWEICRIP 199
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++VT + + + ++ +++LY + G
Sbjct: 200 IDIFVVT--GKMSTFGMIGFLIASMLWLYYAIWIILFG 235
>gi|168705549|ref|ZP_02737826.1| ribonuclease BN [Gemmata obscuriglobus UQM 2246]
Length = 168
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ V+ ++ D+ F+++ +++ ++ LS+ P ++ +AG +
Sbjct: 1 MKMKPQDVWALLKDSATKFIDDKAMRLSAALAYYTTLSLSPLLLAVVAIAGLAYGPEAAR 60
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNR 118
++ A + I++ + + I A F ++GV + ++ +LN
Sbjct: 61 GEIVAQFRDTIGVEAASFVEQLIIKSSSKSDGIVAAIVAGGVLLFGASGVFSDMQSALNT 120
Query: 119 AYRVVEMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIP 157
++V S RL+SF V + L++ S V AIP
Sbjct: 121 IWKVPGHEVKGGILSIVKDRLLSFSLV-CGAAFLLLTSLVVTAIP 164
>gi|256395386|ref|YP_003116950.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256361612|gb|ACU75109.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 303
Score = 47.1 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 85/263 (32%), Gaps = 33/263 (12%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ A+ + +A+A+ I ++ P + HQ V + +
Sbjct: 49 EVLRVALAPETIDRCFAVAAQI----FITAVPMALAVLAFLP----HQLRDRVRESLSAQ 100
Query: 70 W-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
E A + + + A + ++ +L L R Y RSW
Sbjct: 101 LGIEGSAAQSVNAFFNGQDELRDAIGVAGLVLALFSAT----SLTRRLQRVYE----RSW 152
Query: 129 YI--TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ R+ S LA + + I A + +F+ + + + +
Sbjct: 153 MLPPGRMKSSAVRWLAWILVWIAVLSAQGPLRAGSGWWRFWGWTASAAMSVALWWWTPHL 212
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGL 245
L L + ++LP + T ++ + + + S Y
Sbjct: 213 LLL-------------RRVGWRTLLPTALLTGLAQTAIGIGSRFVMPRVTGRSVAEYGPF 259
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
+++ + +L ++ +LGA +
Sbjct: 260 GLVLSLMSWLLVVAGVIVLGAGI 282
>gi|228476776|ref|ZP_04061433.1| tRNA-processing ribonuclease BN [Streptococcus salivarius SK126]
gi|228251575|gb|EEK10694.1| tRNA-processing ribonuclease BN [Streptococcus salivarius SK126]
Length = 181
Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 70/180 (38%), Gaps = 8/180 (4%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV--FGAWPEVIAKPITDEILQVLAV 88
++ + LLS+ P + + + A + V I + P+ + + L A
Sbjct: 1 LTYTTLLSIVPILTVLLMILSSIPALESVREQISDLIYSNLLPQSGLQV--SQYLNDFAE 58
Query: 89 PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ L I A+A S + + + N+ +RV + + ++ + ++ ++
Sbjct: 59 KSSNLTAIGAMALFVTSIMTLTTIERAFNQIWRVEDRSGGVKS-IVRYWTIITLGPLVLG 117
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
+F+ + +L+++ + +G + + G I ++ F+P AK +
Sbjct: 118 TAFIVSSTVQSLSFLNQ---QIGGYGIDWNFWIQLVSFAITIAGFIGMYWFIPKAKVPLK 174
>gi|145593357|ref|YP_001157654.1| ribonuclease BN [Salinispora tropica CNB-440]
gi|145302694|gb|ABP53276.1| ribonuclease BN [Salinispora tropica CNB-440]
Length = 367
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 80/223 (35%), Gaps = 14/223 (6%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A+ + G +A+ I+ +VF + ++ G + G + D + P
Sbjct: 67 RAVLLYNHRFGSRLAAAIAYYGFFAVFALALVAYSVFGAILEGNAEVNAAAADFLRENLP 126
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
D + +A + + + + VEA+R S Y + + +
Sbjct: 127 ------FLDPVK--VAESSGAVGVVGLTILVFTGVGWVEAIRSSQRLLYGLDQQPGNLVV 178
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R + VLL L+ +S V + +R + G+ L + + + A+
Sbjct: 179 RRLVDLGVLLVVFVLLGVSVAAV--DTLESLLRWLLGSAGSAGLTTISAVLSVFVNAVLA 236
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
L+ V +P + + + P V+ + + + HY+V
Sbjct: 237 TLLLV--AVPRLRPSRVRLRPAVLLVAVGITLLNTIGRHYVVR 277
>gi|330004666|ref|ZP_08305006.1| putative tRNA-processing ribonuclease BN [Klebsiella sp. MS 92-3]
gi|328536542|gb|EGF62877.1| putative tRNA-processing ribonuclease BN [Klebsiella sp. MS 92-3]
Length = 160
Score = 46.4 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 2/117 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ E+ +A +++ +LLS+ P I L V I +F +
Sbjct: 20 LKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSVQIRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
I I Q +A ++ + + A S + ++ +LN +R R
Sbjct: 80 IPATGDVIQGYIEQFVANSSR-MTAVGAFGLIVTSLLLMYSIDSALNTIWRSTRSRP 135
>gi|294816169|ref|ZP_06774812.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|326444503|ref|ZP_08219237.1| hypothetical protein SclaA2_25716 [Streptomyces clavuligerus ATCC
27064]
gi|294328768|gb|EFG10411.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 1450
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 27/164 (16%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI-SFGYVLLASVTLVIMSF 151
++ A + + E L + R TRL+ + Y L + T+V+ S
Sbjct: 118 WLSLVVTTAFWGALRLAERLGVG---------TRP---TRLLGAAVYALWPTFTIVVGST 165
Query: 152 VFVAIPLAL-----------AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
A+P AL Y + L+ G A+ LA + + L
Sbjct: 166 SAAALPGALLPWVLLPLTDDRYGARVTALRSAALIPFMGGVNAASTLASLLPVGLYLLSR 225
Query: 201 PAAKSKIM---SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
P K+ +PGV+ + WV+ +L Y F Y
Sbjct: 226 PNGPRKLRLALWWVPGVVLATLWWVIPLLLLRAYGENFLPYVET 269
>gi|158317305|ref|YP_001509813.1| ribonuclease BN [Frankia sp. EAN1pec]
gi|158112710|gb|ABW14907.1| ribonuclease BN [Frankia sp. EAN1pec]
Length = 332
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 76/258 (29%), Gaps = 25/258 (9%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV-VFGAWPE 72
D + D + ++ L+ FPFI+ A L+ + + + E
Sbjct: 53 DLTSRLRQGDLINSSMSLAALILMMFFPFIIALAALSPLRPGGAAEIIIRRMGLNQDAAE 112
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + T + V + + A + G+ L ++ Y V R
Sbjct: 113 AVERLFTPQDETVHNG-------WTVVGALWLILGGL-TLAATVQSVYVQVFRVQPLGLR 164
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I V L + + + + + L + +++ I +L L
Sbjct: 165 GIPAQVVWLCELIVFLAGATGAGALITSTTTGQICYGLLSTTGLLFLLWIGIRVLTL--- 221
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL--FTHYIVTFSTYSTMYAGLASIMT 250
+ P FT + V+ FT + Y + + T
Sbjct: 222 ----------GRIGWREAWPAAAFTTVGLTGLGVVSRFTFSASIVTN-ERNYGSIGVVFT 270
Query: 251 CLVFLYMLGVFFILGAEL 268
L +L GV GA +
Sbjct: 271 ILSWLIGFGVVLTGGAIV 288
>gi|327398727|ref|YP_004339596.1| ribonuclease BN [Hippea maritima DSM 10411]
gi|327181356|gb|AEA33537.1| ribonuclease BN [Hippea maritima DSM 10411]
Length = 254
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 89/261 (34%), Gaps = 16/261 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVF 67
F I +A+ + E ++ ++ +L++ PF+ F + L + +P +
Sbjct: 3 FFDIKEALRIYKERQVLLWSAFLTYLTVLNIVPFVYFSIFVLSHLPFVSKKIPYFKGAII 62
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P AK + ++++ + + V ++ V + +
Sbjct: 63 NIVPAYSAKV--SLYFDTFLKSIASMELLNSIIFSLSMMSLVLGFFKAIRYILGVEKKIN 120
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ T ++ V + I + + IP+ + +
Sbjct: 121 IFKTFGFVLLSIIAVGVIITIAVALRIVIPVFMPKIADAV------------YVRLLPFF 168
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
F+ L + + K ++++ T + + Y F +YS +Y +A
Sbjct: 169 IWFVFLFALFYITKPRELKFLNVIVASFVTTVGVFLLKAALAAYFSIF-SYSKIYGAVAI 227
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
+ + L++L++L + G +
Sbjct: 228 VPSLLLWLFLLWNVILFGVVV 248
>gi|218506519|ref|ZP_03504397.1| putative ribonuclease protein [Rhizobium etli Brasil 5]
Length = 135
Score = 46.0 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 31/74 (41%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + +++ +A+ ++ LL++FP + +L G + + + +
Sbjct: 62 LRDVFWRVYHEVLDDRIMLIAAGVTFYLLLALFPALAALVSLYGLVADPVTISEHLRELA 121
Query: 68 GAWPEVIAKPITDE 81
G P I D+
Sbjct: 122 GLLPPGAFDLIADQ 135
>gi|254393987|ref|ZP_05009079.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197707566|gb|EDY53378.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 1415
Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 27/164 (16%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI-SFGYVLLASVTLVIMSF 151
++ A + + E L + R TRL+ + Y L + T+V+ S
Sbjct: 78 WLSLVVTTAFWGALRLAERLGVG---------TRP---TRLLGAAVYALWPTFTIVVGST 125
Query: 152 VFVAIPLAL-----------AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
A+P AL Y + L+ G A+ LA + + L
Sbjct: 126 SAAALPGALLPWVLLPLTDDRYGARVTALRSAALIPFMGGVNAASTLASLLPVGLYLLSR 185
Query: 201 PAAKSKIM---SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
P K+ +PGV+ + WV+ +L Y F Y
Sbjct: 186 PNGPRKLRLALWWVPGVVLATLWWVIPLLLLRAYGENFLPYVET 229
>gi|77118354|ref|YP_337905.1| polyprotein 1ab [Breda virus]
gi|190360103|sp|P0C6V8|R1AB_BRV1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:
Full=ORF1ab polyprotein; Contains: RecName:
Full=Non-structural protein 1; Short=nsp1; Contains:
RecName: Full=Non-structural protein 2; Short=nsp2;
Contains: RecName: Full=Non-structural protein 3;
Short=nsp3; Contains: RecName: Full=3C-like serine
proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName:
Full=nsp4; AltName: Full=p27; Contains: RecName:
Full=Non-structural protein 5; Short=nsp5; Contains:
RecName: Full=Non-structural protein 6; Short=nsp6;
Contains: RecName: Full=Non-structural protein 7;
Short=nsp7; Contains: RecName: Full=Non-structural
protein 8; Short=nsp8; Contains: RecName:
Full=Non-structural protein 9; Short=nsp9; Contains:
RecName: Full=RNA-directed RNA polymerase; Short=Pol;
Short=RdRp; AltName: Full=nsp11; AltName: Full=p100;
Contains: RecName: Full=Helicase; Short=Hel; AltName:
Full=nsp12; AltName: Full=p67; Contains: RecName:
Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp13;
Contains: RecName: Full=Non-structural protein 14;
Short=nsp14; Contains: RecName: Full=Uridylate-specific
endoribonuclease; AltName: Full=NendoU; AltName:
Full=nsp15; Contains: RecName: Full=Putative 2'-O-methyl
transferase; AltName: Full=nsp16
gi|42495717|gb|AAS17963.1| polyprotein 1ab [Breda virus]
Length = 6733
Score = 46.0 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 26/124 (20%)
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+++ F V + L Y+ + +++ T++ LF+ +
Sbjct: 2942 VFVVLVAIFTIVFLFLLRMYIVMY-SYFKVFTYVVFKLLFVNTVMVLFVVCL-------- 2992
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
++PGV+F W+ +V+F Y+ S + L + Y++
Sbjct: 2993 -----PPLVPGVVFVLALWLCDSVVFLLYLAVLSLF------------ILPWFYVMLFVL 3035
Query: 263 ILGA 266
I+G
Sbjct: 3036 IVGG 3039
>gi|262367622|gb|ACY64179.1| ribonuclease BN-like family protein [Yersinia pestis D182038]
Length = 185
Score = 45.6 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 3/113 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ + +
Sbjct: 51 IIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFVMVGFVLASNPDLLAELINKIVNS 110
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + + A Y + + LR ++ RA+ V
Sbjct: 111 ISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAI-RAHHV 162
>gi|77118349|ref|YP_337906.1| replicase [Breda virus]
gi|190360132|sp|P0C6F4|R1A_BRV1 RecName: Full=Replicase polyprotein 1a; Short=pp1a; AltName:
Full=ORF1a polyprotein; Contains: RecName:
Full=Non-structural protein 1; Short=nsp1; Contains:
RecName: Full=Non-structural protein 2; Short=nsp2;
Contains: RecName: Full=Non-structural protein 3;
Short=nsp3; Contains: RecName: Full=3C-like serine
proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName:
Full=nsp4; AltName: Full=p27; Contains: RecName:
Full=Non-structural protein 5; Short=nsp5; Contains:
RecName: Full=Non-structural protein 6; Short=nsp6;
Contains: RecName: Full=Non-structural protein 7;
Short=nsp7; Contains: RecName: Full=Non-structural
protein 8; Short=nsp8; Contains: RecName:
Full=Non-structural protein 9; Short=nsp9; Contains:
RecName: Full=Non-structural protein 10; Short=nsp10
gi|42495712|gb|AAS17958.1| replicase [Breda virus]
Length = 4445
Score = 45.2 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 26/124 (20%)
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+++ F V + L Y+ + +++ T++ LF+ +
Sbjct: 2942 VFVVLVAIFTIVFLFLLRMYIVMY-SYFKVFTYVVFKLLFVNTVMVLFVVCL-------- 2992
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
++PGV+F W+ +V+F Y+ S + L + Y++
Sbjct: 2993 -----PPLVPGVVFVLALWLCDSVVFLLYLAVLSLF------------ILPWFYVMLFVL 3035
Query: 263 ILGA 266
I+G
Sbjct: 3036 IVGG 3039
>gi|330465688|ref|YP_004403431.1| ribonuclease bn [Verrucosispora maris AB-18-032]
gi|328808659|gb|AEB42831.1| ribonuclease bn [Verrucosispora maris AB-18-032]
Length = 306
Score = 44.8 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 97/271 (35%), Gaps = 15/271 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVP 60
+ F ++ A + + G +A+ I+ +VF + G + +
Sbjct: 19 RHRWPAFGHLWRAGVRYTDLQGGRLAAAIAYYGFFAVFALALVAYAAFGAVLDDNDEVRA 78
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + P + + D + + + L VEA+R S +
Sbjct: 79 AAEEFLGENLPFLDPAQVAD--------SSGTVGVVGLLILILTGIGWVEAIRSSQRLIH 130
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + + R + VLL L+ S V + +R + G++ L +
Sbjct: 131 GLHQHPGNLVVRRLVDLGVLLVVFVLLGASVAAV--DALESLLRFLLRSTGSVGLTTISA 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + A+ L+ + +P + + P V+ + + + ++ ++
Sbjct: 189 VLSVLVNAVLATLMLI--VVPRVQMSRARLRPIVLLVAVGITLLNTVGRFWVGR-VEHNP 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y +A+ + LV+LY+L + GA L A+
Sbjct: 246 AYTVVATAVGLLVYLYLLNQLVLFGAALAAT 276
>gi|228949354|ref|ZP_04111617.1| hypothetical protein bthur0007_54700 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228810337|gb|EEM56695.1| hypothetical protein bthur0007_54700 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 1562
Score = 44.8 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 33/188 (17%)
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL-RISLNRAYRVVEMR 126
P I I+ + + L + + +++N + + NR Y + R
Sbjct: 49 TFAPNDITGIISPGVGNLTI-----LIGFILVFSMIYAANKISSTSINPGNRTYFLEFAR 103
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAI-------------PLALAYVRKFFPALGNL 173
W L+ +L V + + PL + F L L
Sbjct: 104 DWIFVILVLGNLSILYDVVFTLNKGIIDFFKSSLDLTGKDIYPPLGEHIIGGIFARLVLL 163
Query: 174 LLIIWNGRIY----ATMLALFI---GLIFVHLFLPAAKSKIMSI--LPGVIF-----TWI 219
+ IW Y T++ L I I + +F + G +F +
Sbjct: 164 GVTIWAYFYYLMRKITLIILMILGPVFISLFMFPATRQVTFTWFKEFVGTVFVQAIHALL 223
Query: 220 SWVVGAVL 227
W+V ++
Sbjct: 224 LWIVATIV 231
>gi|218848161|ref|YP_002454841.1| hypothetical protein BCG9842_0176 [Bacillus cereus G9842]
gi|218546292|gb|ACK98685.1| membrane protein, putative [Bacillus cereus G9842]
Length = 1562
Score = 44.8 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 33/188 (17%)
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL-RISLNRAYRVVEMR 126
P I I+ + + L + + +++N + + NR Y + R
Sbjct: 49 TFAPNDITGIISPGVGNLTI-----LIGFILVFSMIYAANKISSTSINPGNRTYFLEFAR 103
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAI-------------PLALAYVRKFFPALGNL 173
W L+ +L V + + PL + F L L
Sbjct: 104 DWIFVILVLGNLSILYDVVFTLNKGIIDFFKSSLDLTGKDIYPPLGEHIIGGIFARLVLL 163
Query: 174 LLIIWNGRIY----ATMLALFI---GLIFVHLFLPAAKSKIMSI--LPGVIF-----TWI 219
+ IW Y T++ L I I + +F + G +F +
Sbjct: 164 GVTIWAYFYYLMRKITLIILMILGPVFISLFMFPATRQVTFTWFKEFVGTVFVQAIHALL 223
Query: 220 SWVVGAVL 227
W+V ++
Sbjct: 224 LWIVATIV 231
>gi|237755913|ref|ZP_04584505.1| putative membrane protein [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691938|gb|EEP60954.1| putative membrane protein [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 249
Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 84/227 (37%), Gaps = 20/227 (8%)
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + +++ +P + + + A+ I+ L + +FS + A+ + +
Sbjct: 13 ISEIYFILYKIFPNSAESFLNTVLKLSQSQVAQKSIVITILLSIFFSKDLFVAISQAFSY 72
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA----------------IPLALAY 162
Y I + L ++ L+ F+F+ L +
Sbjct: 73 IYEAKVAEGKVILIISMLALPFLVTLILIFYVFLFIVKFLFSNIEKISSGVSKDILFIER 132
Query: 163 VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK----IMSILPGVIFTW 218
++ F + N L +I + + + + ++ F + K + +L IF
Sbjct: 133 IKNFLGFINNKLGLIQIILNLSEVFIFALIIWLIYYFFTPVQEKSKSFVKHVLTISIFIS 192
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + + FT I+ F + + +Y + SI T ++++ + ++G
Sbjct: 193 VIMFLLKIAFTFLILNFLSTNPLYLTMGSIFTFIIWVKLCFDILLIG 239
>gi|207108140|ref|ZP_03242302.1| putative ribonuclease N [Helicobacter pylori HPKX_438_CA4C1]
Length = 125
Score = 44.4 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 192 GLIFVHLFLPAAK--SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ +P K + V FT +SW V FT+Y++ TY +Y ++ +
Sbjct: 23 AFFLILFTIPTNKVFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILW 82
Query: 250 TCLVFLYMLGVFFILG 265
+ ++Y+ + ++G
Sbjct: 83 FLMSWVYVSWLVILIG 98
>gi|111224781|ref|YP_715575.1| putative integral membrane protein [Frankia alni ACN14a]
gi|111152313|emb|CAJ64046.1| Putative integral membrane protein [Frankia alni ACN14a]
Length = 280
Score = 44.1 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 81/262 (30%), Gaps = 30/262 (11%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ E D A ++ L+ FPF++ A ++ I +
Sbjct: 18 NLARQLRESDLINGAMTLAALILMLFFPFLITLAAVSPLRPGG---AAEIIIRRMGLNHD 74
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A + + L A + + G+ +L ++ Y V + R
Sbjct: 75 AAMAVERLFTPHGGGGGSAQSEWTVLGALWLTLGGL-SLAGAVQSVYLRVFRIPAFGLRG 133
Query: 134 ISFGYVLLASVTLVIM---SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ V LA + + + + V A+ V + + + L++W+G
Sbjct: 134 VPAQVVWLAGLIVFLAGTTATGAVLTGTAVGQVCQGLIVVAAMGLLLWSGTWILV----- 188
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA----VLFTHYIVTFSTYSTMYAGLA 246
+ ILP +FT I +LF+ + Y +
Sbjct: 189 -----------RGRLGWREILPTAVFTTIGLTGLGVVSRLLFS---ESIVENERNYGEIG 234
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
I T L +L GV GA +
Sbjct: 235 VIFTFLSWLIGFGVVLTGGAIV 256
>gi|311112758|ref|YP_003983980.1| CAAX amino protease [Rothia dentocariosa ATCC 17931]
gi|310944252|gb|ADP40546.1| CAAX amino protease [Rothia dentocariosa ATCC 17931]
Length = 820
Score = 44.1 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 27/163 (16%)
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V W+ L + V L+I+SF +A + L + L + ++
Sbjct: 85 HVNPRARWFTPVLEGLLIAGIYFVLLLIVSFALLAFAVMLRVPYDYLTDLQRIYANVFKT 144
Query: 181 RIYATMLALFIG----LIFVHLFLPAAKS---------KIMSILPGVIFTWISWVVGAVL 227
+ L + I IF+ + K ++ GV G ++
Sbjct: 145 PLVFIALLITIIPVIPAIFIARLITNFKPLGLIHSIAGRMRWSYLGVFLG-----FGFLI 199
Query: 228 FTHYIVTFSTYSTMYAGLAS------IMTCLVFLYMLGVFFIL 264
F Y V F+T L + + + + +LY++ + I+
Sbjct: 200 FGLYYVGFATLD---GSLTTHNSVHPLNSGMFWLYIVLILLIV 239
>gi|297196140|ref|ZP_06913538.1| ribonuclease BN [Streptomyces pristinaespiralis ATCC 25486]
gi|197719449|gb|EDY63357.1| ribonuclease BN [Streptomyces pristinaespiralis ATCC 25486]
Length = 288
Score = 44.1 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 77/264 (29%), Gaps = 48/264 (18%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG------FLGAHQFVPTVIDVVFG 68
D + ++ +LL FPF++ A G G V
Sbjct: 50 LWSRLSALDFLGNSFQLAALSLLCFFPFLIVLAAAVGRDAATTLAGWLGLSRQAAQAVAS 109
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+PE G T++ +A + V + S
Sbjct: 110 LFPE---------------GEPPGSLTVAGVAMLLLGAVAVAGILQS------------- 141
Query: 129 YITRLI---SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL S G+ L S + + ALA PA L + +
Sbjct: 142 WYQRLFDVPSRGWRDLPSQLCWLALLLAYGAAQALAGGSLDAPASRGLFGLATATCFWWA 201
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAG 244
+ +F+ PA S+LP + T + W + Y S Y
Sbjct: 202 TMYVFLV--------PAV--SWRSLLPSAVVTAVCWTGLGLFSARYFSAAIVANSEKYGP 251
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
+ +M + +L +GV LG +
Sbjct: 252 IGVVMIIMSWLVAVGVVIHLGVVV 275
>gi|320161974|ref|YP_004175199.1| putative hydrolase [Anaerolinea thermophila UNI-1]
gi|319995828|dbj|BAJ64599.1| putative hydrolase [Anaerolinea thermophila UNI-1]
Length = 786
Score = 43.7 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 17/114 (14%)
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL---AYVRKFFPALGNLLLIIWN 179
+ R + LI+ G + V L + V IP L + LL +
Sbjct: 15 RKGRDRWTFYLITLGLAFIFMVVLT----LMVFIPFVLVNPSNAVTVMDLPAPALLTVTM 70
Query: 180 GRIYATMLALFIGLIFVHL------FLPAAKSKIMSILPGVIFTWISWVVGAVL 227
+LA+++ L F+H PA + + +F W+V + L
Sbjct: 71 LPFSGVILAIWLALRFLHRRPFQSLIAPAGRFRWRLFFTSALF----WLVLSAL 120
>gi|300744168|ref|ZP_07073187.1| CAAX amino protease family protein [Rothia dentocariosa M567]
gi|300379893|gb|EFJ76457.1| CAAX amino protease family protein [Rothia dentocariosa M567]
Length = 823
Score = 43.7 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 27/163 (16%)
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V W+ L + V L+I+SF +A + L + L + ++
Sbjct: 85 HVNPRARWFTPVLEGLLIAGIYFVLLLIVSFALLAFAVMLRVPYDYLTDLQRIYANVFKT 144
Query: 181 RIYATMLALFIG----LIFVHLFLPAAKS---------KIMSILPGVIFTWISWVVGAVL 227
+ L + I IF+ + K ++ GV G ++
Sbjct: 145 PLVFIALLITIIPVIPAIFIARLITNFKPLGLIHSIAGRMRWSYLGVFLG-----FGFLI 199
Query: 228 FTHYIVTFSTYSTMYAGLAS------IMTCLVFLYMLGVFFIL 264
F Y V F+T L + + + + +LY++ + I+
Sbjct: 200 FGLYYVGFATLD---GSLTTQNSVHPLNSGMFWLYIVLILLIV 239
>gi|46107656|ref|XP_380887.1| hypothetical protein FG00711.1 [Gibberella zeae PH-1]
Length = 1976
Score = 43.7 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 90/274 (32%), Gaps = 47/274 (17%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
++ + + + + +N G L A + + + P + I + ++
Sbjct: 1513 LAAAVIFWIGSLLCAVSNSMGMLIAARAIQGIGGGGLIVLPNIA-------ISDLFSIRN 1565
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL---- 146
+G++ L + ++ V + + +V +YI IS ++ L
Sbjct: 1566 RGMY-FGILGMVWALASAVGPILGGV-FTSQVTWRWCFYINLPISAVAFVILVFFLKLHN 1623
Query: 147 -----------------VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+++ V L L + FP + + L
Sbjct: 1624 PRTPMKEGLMALDWPGSILIIGGTVMWLLGLEFGGVSFPWNSATTICL------LVFGIL 1677
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH---YIVTFSTYS--TMYAG 244
IGL ++ + K +LP +F+ + + + ++ +Y Y G
Sbjct: 1678 VIGLFLLYEW----KVAKFPVLPLRLFSTRN-SIASYGVGFTHAFVFMSGSYWLPLYYQG 1732
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + L +Y+L L ++A + IY +
Sbjct: 1733 VLGASSLLSGVYLLPYVLSLSF-ISAGVGIYIKK 1765
>gi|313139409|ref|ZP_07801602.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313131919|gb|EFR49536.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 249
Score = 43.3 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 81/222 (36%), Gaps = 6/222 (2%)
Query: 54 GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
G+ + T++ ++ P V + +L ++ ++ + + + +LR
Sbjct: 11 GSEEMQKTLLAMLRTVIPSVSDSLFSASMLSGISHTLTWTGLVTLAVFWWTVTGWMNSLR 70
Query: 114 ISLNRAYR-VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
++ + + + RL ++ +V ++ + V + V + +
Sbjct: 71 NAVTTMFDDCTQELNVVKARLRDTVAAIMVAVLFILSTAAGVVSGGLMRLVLRALGIADD 130
Query: 173 LL---LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
L L++ + +L F + + + ++ +++ V L
Sbjct: 131 SLPGALLLESTGFATGVLLNFALFMLLLRVVAHIRAGKFTLV--GAALGALAVAVMQLLG 188
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
++T ++ + M A A+I+ L++ ++ ++ A A
Sbjct: 189 ARLLTGASRNPMLAPFAAIIGVLIWFNLVAQVIMICAAFIAE 230
>gi|238062593|ref|ZP_04607302.1| LOW QUALITY PROTEIN: ribonuclease BN [Micromonospora sp. ATCC
39149]
gi|237884404|gb|EEP73232.1| LOW QUALITY PROTEIN: ribonuclease BN [Micromonospora sp. ATCC
39149]
Length = 327
Score = 42.9 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 7/158 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FD ++ A + E G +A+ I+ +VF + ++ G + V + G
Sbjct: 41 FDHLWRAGNLYAEVLGGRLAAAIAYYGFFAVFALALVAYSIFGAILEDN--DEVSNAAAG 98
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-S 127
E + ++I Q I + VEA+R S Y + + +
Sbjct: 99 FLRENLPFLDPEQIAQSSNTVGVVGLVILVFTGIGW----VEAIRSSQRLMYGLNQQPGN 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ RL+ G ++ V L + A+ L ++ +
Sbjct: 155 LVVRRLVDLGVLVGVFVLLGLSVAAVDALESLLRFLLR 192
>gi|184201440|ref|YP_001855647.1| hypothetical protein KRH_17940 [Kocuria rhizophila DC2201]
gi|183581670|dbj|BAG30141.1| hypothetical membrane protein [Kocuria rhizophila DC2201]
Length = 389
Score = 42.9 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 100/278 (35%), Gaps = 20/278 (7%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQ-FVPTVIDVVFGAWP 71
+ H++ G MA+ ++ L + + +F A LA FLG + ++ + P
Sbjct: 62 RVVAHYMFHGGPLMAAGLAYQLLFASTALLVIFFAALATFLGTNSPLQQNLVAGLVEKIP 121
Query: 72 EVI-AKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVVEMR 126
++ ++ + + G FT+++ A + + V +R++ R + +
Sbjct: 122 GLLDVGDGRGGVIPLRLLEDTGPFTVASTVAVAVLLFTAWRWVAGVRLATRRMFELPPAP 181
Query: 127 S-WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
G++++ V L+ + V V A+ V + +G L W +
Sbjct: 182 GVPMAAVPRDLGWLVVIGVLLLASATVSVFASGAVDGVIGWLGDIGLTRLQPWLDGGVKS 241
Query: 186 MLALFIGLIF-------VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ +GL+ + + K ++ V+ V + I
Sbjct: 242 AVTFAVGLVVDCVMSFSLVRGVAQLKLHRKALAVTVVVGAAGSQVLRYGGSEVIGRAGE- 300
Query: 239 STMYAGLASIMTCLVFLYMLGVFFIL----GAELNASM 272
+ A ++ L++ + G +L GA + A +
Sbjct: 301 NPYLLSAAVLVGVLLWFNLYGQILLLAAASGAVVQADI 338
>gi|315452855|ref|YP_004073125.1| ribonuclease BN [Helicobacter felis ATCC 49179]
gi|315131907|emb|CBY82535.1| ribonuclease BN [Helicobacter felis ATCC 49179]
Length = 279
Score = 42.9 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 40/240 (16%), Positives = 91/240 (37%), Gaps = 17/240 (7%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE--VIAKPITD 80
+ AS +S +LS+ P ++F A + F+ V P+ I
Sbjct: 39 RIFYYASSLSFYTILSLSPVLLFIALI--FVSPFSKTFEVETFFLPNSPDFMKIGDLFLK 96
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
++ G+ I+ +A A+F E R ++ + ++ R+ F +
Sbjct: 97 SFMR--NNRTLGIIEIAFIALAFFL--FCENYRYIASQILNAPPRKYIHLGRVKIFLFWG 152
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L + +++++ + + + + P L LL I + + L +F H +
Sbjct: 153 LGTGLVLVIALLMLIVAHIYIHRNIHNPYLLALLRWITLYVYFLLLFFLPTQKVFKHKW- 211
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ + G T + W + F +YI+ TY +Y ++ + + ++Y+ +
Sbjct: 212 ------HLLVWSGG--TSLCWTLMKWGFVYYILYNRTYHELYGSISILWFFMSYIYISWL 263
>gi|281207785|gb|EFA81965.1| lmbr1 long form [Polysphondylium pallidum PN500]
Length = 644
Score = 42.5 bits (99), Expect = 0.060, Method: Composition-based stats.
Identities = 20/188 (10%), Positives = 69/188 (36%), Gaps = 7/188 (3%)
Query: 43 IVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA 102
+ + + + + D++ + + G+ + + L
Sbjct: 45 LTTFNTIPTMVDKSNDAKQQLSNLTDNNNSNNNNNNNDQVEFIFSFMRDGIVSFTFLLTL 104
Query: 103 YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY 162
+ S + R V ++ Y+ R++ + ++ ++++ ++ + +
Sbjct: 105 FILS---HFIVRKYIRKKDVDKI--LYLPRILCTFCLSVSLAAMLLIPITIISNEIITTF 159
Query: 163 VRKFFPAL--GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
++ +L+ WN + + ++LFI L F + + A K S + + +
Sbjct: 160 PSNYYIQWLHRDLIFSFWNKIFWGSNISLFIILPFAYFYYEAEGLKERSFISRIKAALLV 219
Query: 221 WVVGAVLF 228
+++ +++F
Sbjct: 220 FLLVSLIF 227
>gi|288917750|ref|ZP_06412112.1| hypothetical protein FrEUN1fDRAFT_1807 [Frankia sp. EUN1f]
gi|288350806|gb|EFC85021.1| hypothetical protein FrEUN1fDRAFT_1807 [Frankia sp. EUN1f]
Length = 280
Score = 42.5 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 77/261 (29%), Gaps = 31/261 (11%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + D A +++ L+ FPF++ A + LGA VI +
Sbjct: 8 DLVSRLRAADLINGAMNLAALILMMFFPFVIALAAASP-LGAGGAADIVIRRM------G 60
Query: 74 IAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + ++ + S L + GV +L S+ Y V S R
Sbjct: 61 LNHDAAMAVERLFTPRGGTTVSGWSVLGVLWLVLGGV-SLAASIQVVYERVFRLSPAGLR 119
Query: 133 LIS---FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L + V + + L +W G TM
Sbjct: 120 GLRNQVVWLTGLLVFLAGSTALGSVLTRTTVGQAGYALAVVVMTALFLWAGARVLTM--- 176
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT--HYIVTFSTYSTMYAGLAS 247
+ + P FT I F+ + T + + Y +
Sbjct: 177 -------------GRLSWRAAWPVAFFTTIGLTGLG-GFSRLTFSATIVSNESTYGPIGV 222
Query: 248 IMTCLVFLYMLGVFFILGAEL 268
+ T L +L GV I GA +
Sbjct: 223 VFTILSWLIGFGVVMIGGAVV 243
>gi|229818144|ref|ZP_04448426.1| hypothetical protein BIFANG_03436 [Bifidobacterium angulatum DSM
20098]
gi|229784395|gb|EEP20509.1| hypothetical protein BIFANG_03436 [Bifidobacterium angulatum DSM
20098]
Length = 327
Score = 42.5 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 32/272 (11%), Positives = 88/272 (32%), Gaps = 28/272 (10%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV--PTVIDVVFGAWPE 72
I F +G +++ ++ + L + F I + I + P
Sbjct: 27 VINRFARRNGGTLSNGMAYNLLFAFFSGIWTVFAVVTLFFTKNTTLLDWFISTLERTIPG 86
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ ITD ++ ++ ++ + ++A R + + + ++
Sbjct: 87 L---SITDSMVDGISSTMTWTGVLTFCIFIWKVLCCLDAWRNAAWTM--MDRPKPFFDPV 141
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII--------------- 177
I F + + ++ +A ++ VR+ L +L ++
Sbjct: 142 QIRFFDAVAFILVALMFVVSSIAGVISGGIVRRIVNLLHDLAMLPESNTTLANSMLLDLS 201
Query: 178 -WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + +L + + FV + + L G + I ++G+ L +
Sbjct: 202 GFLIGLVFNILLMALMFCFVARIRCDKRLTVFVCLIGGLVISILQLLGSRLLGG-----A 256
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T + + A + + L++ + + A
Sbjct: 257 TSNPLMAPFSVFIGVLIWFSFIAQILMYCAAF 288
>gi|297199449|ref|ZP_06916846.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197713011|gb|EDY57045.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 1383
Score = 42.1 bits (98), Expect = 0.079, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 58/163 (35%), Gaps = 27/163 (16%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
++ A + + E LRI + L + Y L + T+V+ S
Sbjct: 116 WLSLIVSVAFWGALRLAERLRIG-----------NGPGRLLAAVAYALWPTFTIVVGSTS 164
Query: 153 F----------VAIPLALAYVRKFFPALGNLLLIIWNGRIYAT---MLALFIGLIFVHLF 199
V +PL + AL + LL+ + G + A L +GL +
Sbjct: 165 AAALPGAFLPWVLLPLTNERLSARIAALRSALLVPFMGGVNAASTLACLLPVGLYLLSR- 223
Query: 200 LPAAKSK--IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
P + + I+ +PGVI WV+ +L Y F Y
Sbjct: 224 PPGPRQRKLIVWWVPGVILATAWWVIPLLLLGLYGENFLPYVE 266
>gi|307822207|ref|ZP_07652439.1| ribonuclease BN [Methylobacter tundripaludum SV96]
gi|307736773|gb|EFO07618.1| ribonuclease BN [Methylobacter tundripaludum SV96]
Length = 106
Score = 42.1 bits (98), Expect = 0.079, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y IM +++Y+ G FI GA L A+
Sbjct: 67 IYGAFGGIMALPLWIYLSGCIFIFGACLCAA 97
>gi|269218781|ref|ZP_06162635.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211892|gb|EEZ78232.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 343
Score = 42.1 bits (98), Expect = 0.080, Method: Composition-based stats.
Identities = 26/220 (11%), Positives = 64/220 (29%), Gaps = 29/220 (13%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQ-FVPTVIDVVFGA 69
+ + G +A I+ SAL ++ + + +G+ V+
Sbjct: 21 VTRGFVRYGTARGGVLAGGIAYSALFALTAAMTIAWTAFMALMGSDSRLRADVLRGFDRV 80
Query: 70 WPEVIAKPITDEILQ----VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P ++ I+ VL ++ L + +++ V + S+ + +V +
Sbjct: 81 LPGILKTGDGGGIVDPDSLVLKSAVTPASVLAGLVLLFTATSVVANVGKSVQAMFGIVSL 140
Query: 126 R-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RL S G ++ ++ + S + V L
Sbjct: 141 HIGLAARRLRSLGGFVVLALGVGASSVLTVFGGLG----------------------ALV 178
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
+ + F+ + + +L G +
Sbjct: 179 SFAVDVGVVAFIFRVVAGVRMPRRDLLLGATSAAAGTTIL 218
>gi|297475073|ref|XP_002687765.1| PREDICTED: transmembrane and tetratricopeptide repeat containing
1-like [Bos taurus]
gi|296487347|gb|DAA29460.1| transmembrane and tetratricopeptide repeat containing 1-like [Bos
taurus]
Length = 939
Score = 42.1 bits (98), Expect = 0.088, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +TR +++ Y+L +V L++ P+ L Y + L+ IW+ R AT+
Sbjct: 365 PYILTRFLTYSYLLAFNVWLLLA-------PVTLCY--DWQVGSIPLVETIWDIRNGATI 415
Query: 187 L-ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L A+ + L+ +H + + +L G++F ++ + LF
Sbjct: 416 LLAVVMALLSLHCLAAFKRLEHREVLVGLLFLVFPFIPASNLF 458
>gi|300795427|ref|NP_001179690.1| transmembrane and TPR repeat-containing protein 1 [Bos taurus]
Length = 939
Score = 42.1 bits (98), Expect = 0.089, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +TR +++ Y+L +V L++ P+ L Y + L+ IW+ R AT+
Sbjct: 365 PYILTRFLTYSYLLAFNVWLLLA-------PVTLCY--DWQVGSIPLVETIWDIRNGATI 415
Query: 187 L-ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L A+ + L+ +H + + +L G++F ++ + LF
Sbjct: 416 LLAVVMALLSLHCLAAFKRLEHREVLVGLLFLVFPFIPASNLF 458
>gi|118354201|ref|XP_001010363.1| IP3 receptor calcium ion channel [Tetrahymena thermophila]
gi|89292130|gb|EAR90118.1| IP3 receptor calcium ion channel [Tetrahymena thermophila SB210]
Length = 3185
Score = 42.1 bits (98), Expect = 0.095, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 7/117 (5%)
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAY----VRKFFPALGNLLLIIWNGRIYAT 185
+ +L+ F + + L+ +F+ + P+ A + + P+L N+L + R Y
Sbjct: 2873 VEKLLEFVFEKWVDIGLIACAFLALFNPVVTAILLFDIFRRIPSLKNILQSLIIAR-YQL 2931
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L + L+ ++F L FT W +F + Y++ Y
Sbjct: 2932 FLTFILFLVLTYIFAILVYYFFWDYLSNQCFT--LWTCFLFIFDMTFKNNAGYTSSY 2986
>gi|271966850|ref|YP_003341046.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270510025|gb|ACZ88303.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length = 302
Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 94/263 (35%), Gaps = 19/263 (7%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVF 67
D + A + + DG +++ ++ A ++F + ++ G L Q + TV +
Sbjct: 24 LDHLVRAGARYDQADGGRLSAALTYYAFFALFALALLSFSIIGHVLDDPQVIRTVQRYLT 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISA--LAAAYFSSNGVEALRISLNRAYRVVEM 125
+P + + + D A G+ + ++ ++ LR ++ +R+ E
Sbjct: 84 DNFPRLDVQALRD------ARSTAGVIAFIGLPITGLFW----MDTLRSAIRAIWRIEEY 133
Query: 126 RS-WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ + +LI G + L V A L ++ + + W A
Sbjct: 134 PGRFLLRQLIDLGVLAGLGALLSASLAVAFAAESLLNWLLVHTVGVDDT-PTQWLLAAVA 192
Query: 185 TMLALFIGLIFVHLFLPA---AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L L + + L A + +L +F + V + Y+ + +
Sbjct: 193 FVLGLGVNTLLAVALLTAPPRLRLPPRRVLGPALFISLGLEVLKTIGQFYLEITAA-NPA 251
Query: 242 YAGLASIMTCLVFLYMLGVFFIL 264
Y +A + L FL +L +
Sbjct: 252 YQVVAGAVALLAFLKLLNQLILF 274
>gi|323356582|ref|YP_004222978.1| hypothetical protein MTES_0134 [Microbacterium testaceum StLB037]
gi|323272953|dbj|BAJ73098.1| predicted membrane protein [Microbacterium testaceum StLB037]
Length = 354
Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 74/213 (34%), Gaps = 13/213 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGA 69
+ A + G +A ++ L S+F ++ G + A G + + + V
Sbjct: 17 LVRAFLVYSGARGPILADSVTYRTLFSLFAAVLIGFSAAAVWLSGNPEGLAALERSVNNV 76
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI----SALAAAYFSSNGVEALRISLNRAYRVV-E 124
P ++ TD +L V A+ A FTI + + + +LR +L + V +
Sbjct: 77 VPGLVG---TDGLLDVSAIKAPTEFTIAGVIGTIGLLGAAIGAIGSLRAALRQIAGVTTD 133
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGR 181
+ + + + V LV + V L +VR + ++ W
Sbjct: 134 DTLPVLVIVRNLAVAVGIGVALVGAALVTFLATAGLTFVRGLLGISADSWVTAVLTWALS 193
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
++ + L K++ ++ G
Sbjct: 194 TIVVLVLDTAAVAVAFAALSGVKTRRRTLWRGA 226
>gi|290960733|ref|YP_003491915.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260650259|emb|CBG73375.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 1480
Score = 41.7 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 7/126 (5%)
Query: 133 LISFGYVLLASVTLVIMSFVF---VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L ++ S + + F V +PL AL + L+I + G + A+
Sbjct: 154 LWPVFTTVVGSTSAAALPGAFLPWVLLPLTNERYSARVAALRSALVIPFMGGVNASATLA 213
Query: 190 FIGLIFVHLFL--PAAKSK--IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + ++L P + + I +PGV+ WVV +L Y F Y
Sbjct: 214 SLLPVGLYLLTRRPGPRQRGLIAWWVPGVLLATAWWVVPLLLLGFYGENFLPYVESSQTT 273
Query: 246 ASIMTC 251
+ M+
Sbjct: 274 TATMSA 279
>gi|29833561|ref|NP_828195.1| hypothetical protein SAV_7019 [Streptomyces avermitilis MA-4680]
gi|29610684|dbj|BAC74730.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 286
Score = 41.7 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 86/270 (31%), Gaps = 40/270 (14%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV--VFGAWPEVIAKPITDE 81
G+ + ++ SAL ++ P V G + + VI + GA E + +
Sbjct: 2 GFDRSMALASSALTTLLPLAVLGGTVVSSFAHYDAAERVIKRYGLTGAGAEAVESLFSP- 60
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-----EMRSWYITRLISF 136
+ + + + A + + + + R+ L
Sbjct: 61 ----AQHTSASVGIFGVVFLTISVLSFARATQRLFEQTWELKPLSMRNTRNGLWWILTLG 116
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
GY ++ +S V L LA + P ++W+G
Sbjct: 117 GYTVVTGW----LSAVLGGGRLGLAALVCDVPV--TAAFLVWSG---------------- 154
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASIMTCLVFL 255
L A + +LP I + +V T Y+ F++Y+ Y L ++ + L
Sbjct: 155 -WILSAKRINRPDLLPFGIAAALLEAAYSVGTTVYLPRLFNSYAARYGALGAVFAMISAL 213
Query: 256 YMLGVFFI----LGAELNASMIIYYWRKKP 281
+ + + LG E+ + +P
Sbjct: 214 FGGMLVIVASAALGREVRDELTRIRHGHRP 243
>gi|261253123|ref|ZP_05945696.1| hypothetical protein VIA_003148 [Vibrio orientalis CIP 102891]
gi|260936514|gb|EEX92503.1| hypothetical protein VIA_003148 [Vibrio orientalis CIP 102891]
Length = 423
Score = 41.7 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L +S+ LV+ FVA L+Y + FP + LI + + + V
Sbjct: 126 FTLFSSIGLVLGVAQFVAWGYLLSYGVERFPMIAQAKLIATEHLPSIIAICISVAFYLV- 184
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
K + + FT + ++L+ +Y F Y+ Y
Sbjct: 185 ----GRKLRWRFMF--AKFTAV--FALSMLYANY-AHFFFYADDY 220
>gi|196047859|ref|ZP_03115037.1| putative membrane protein [Bacillus cereus 03BB108]
gi|196021115|gb|EDX59844.1| putative membrane protein [Bacillus cereus 03BB108]
Length = 1562
Score = 41.4 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 60/185 (32%), Gaps = 33/185 (17%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I I+ + L + + S + AA FSS + NR Y +R W
Sbjct: 53 PSEITGIISPGVGN-LTILLGFILVFSMVHAAIKFSSTSINP----ANRTYFFEFVRDWL 107
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAI-------------PLALAYVRKFFPALGNLLLI 176
L+ +L V + V PL + F L +
Sbjct: 108 FVILVLGNLGVLYDVVFTLNKGVIDFFKSNLDLTGKDIYPPLKDHIIGGIFARLVLFFVT 167
Query: 177 IWNGRIYA-----TMLALFIGLIFVHLFL-PAAKS---KIMSILPGVIF-----TWISWV 222
IW Y ++ + +G IFV LF+ P+ + G +F + W
Sbjct: 168 IWAYFYYLMRKITLLVLMILGPIFVSLFMFPSTRQVTFTWFKEFIGTVFVQAVHALLLWT 227
Query: 223 VGAVL 227
+ ++
Sbjct: 228 IATIV 232
>gi|297691489|ref|XP_002823117.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
isoform 1 [Pongo abelii]
Length = 944
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +TR +++ Y+L +V L++ P+ L Y + L+ IW+ R AT+
Sbjct: 370 PYILTRFLTYSYLLAFNVWLLLA-------PVTLCY--DWQVGSIPLVETIWDMRNLATI 420
Query: 187 L-ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L A+ I L+ +H + + +L G++F ++ + LF
Sbjct: 421 LLAVVIALLSLHCLAAFKRLEHKEVLVGLLFLVFPFIPASNLF 463
>gi|297156600|gb|ADI06312.1| ribonuclease BN [Streptomyces bingchenggensis BCW-1]
Length = 298
Score = 41.4 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 39/255 (15%), Positives = 81/255 (31%), Gaps = 23/255 (9%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ E + + AS ++ A L+ P ++ A A G + + V G
Sbjct: 32 VARLTERLLAVNTLEAASRLAAQAFLTALPLLMAVAAFAPE-GWKGLLADSVRSVVGVRG 90
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + G + + A ++ AL+ R + + R
Sbjct: 91 KALEELRRALAASGTTRKPSG--AVGLVVALVSATAFSRALQGVCERCWNLPRAR----I 144
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R+ ++ ++L LV ++ +FV P+ + L LL + L L
Sbjct: 145 RVAAWRWLLW---VLVWLAVLFVQAPVRRGFGTGIVSGLVLSLLSAVLLWWWTQHLLL-- 199
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS-TMYAGLASIMT 250
+ + +LPG + V + S L + T
Sbjct: 200 ----------GGRVGWLPLLPGAVLAGTGTVALGYASRLVMPRAMDRSLADLGPLGPVFT 249
Query: 251 CLVFLYMLGVFFILG 265
L +L ++ + + G
Sbjct: 250 LLSWLIVVFLIVVAG 264
>gi|111221127|ref|YP_711921.1| putative glycosyl transferase [Frankia alni ACN14a]
gi|111148659|emb|CAJ60333.1| Putative glycosyl transferase [Frankia alni ACN14a]
Length = 271
Score = 41.4 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 81/261 (31%), Gaps = 23/261 (8%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
D + D +A+ ++ A ++V P ++ NL G L + D + A P+
Sbjct: 6 RDVVGALRGHDLALLAAGVTYYAAIAVVPCVLVAVNLLGLLLGRPRAAELGDSLADALPD 65
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ P ++A AA S V Y R++
Sbjct: 66 GLGAPA---------------VVLAAFDAALTMSPLVVVAAAVPASFYGEGLRRAFVRLA 110
Query: 133 LISFGYV-----LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
S G V L L + + + L + + F G + L
Sbjct: 111 GTSEGLVGWRGRLGVLPLLAAAPVLLLPVLLVTPTLARLFAERGVSAGLGVIVAFAVDWL 170
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
AL L+ V+ + + + L T F ++ + G +
Sbjct: 171 ALTATLVIVYRVVGPGRPGWAATLWAAASTGSFVAGFVQGFVLFLSFHLDLGLPFGGFRA 230
Query: 248 IMTCL---VFLYMLGVFFILG 265
I + +L++L + ++G
Sbjct: 231 IGAAVAVGFWLFLLHLIVLVG 251
>gi|315042411|ref|XP_003170582.1| hypothetical protein MGYG_07826 [Arthroderma gypseum CBS 118893]
gi|311345616|gb|EFR04819.1| hypothetical protein MGYG_07826 [Arthroderma gypseum CBS 118893]
Length = 463
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 4/132 (3%)
Query: 133 LISFGYVLLASVTLVIMSFVFVA-IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ VLL +V L + S V A + L+Y P L I + I + ++
Sbjct: 243 FMAVLAVLLYTVLLCLSSIVVGAHLADGLSYFTPTLPF--KFLRNILDRLIVLLAVGCWM 300
Query: 192 GLIFVHLFLPAAKSKIMSI-LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
G IF+ ++ P I G I + LF Y + + L + +
Sbjct: 301 GAIFLAIWTPDRHRPIQEQHWRGSAEFAIIFAPIGCLFRFYASLYFNPLILSFPLGTFLV 360
Query: 251 CLVFLYMLGVFF 262
++ +LG+ F
Sbjct: 361 NMIGTLILGICF 372
>gi|166364511|ref|YP_001656784.1| hypothetical protein MAE_17700 [Microcystis aeruginosa NIES-843]
gi|166086884|dbj|BAG01592.1| hypothetical protein MAE_17700 [Microcystis aeruginosa NIES-843]
Length = 420
Score = 41.4 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 48/155 (30%), Gaps = 39/155 (25%)
Query: 125 MRSWYITRLISF-----GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
R+ R++ G L L++M+ V L + L +L +I+ +
Sbjct: 41 SRNPVRQRILLLKDLRPGNAGLLLAPLMVMTIGLVFSWDWLGFSGAIVAILISLQVILPS 100
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI------- 232
R + H P+ + +F +I ++ Y+
Sbjct: 101 IRQWIA-----------HYLTPSERQ--------TVFAFIVFIAALAALGKYLGVYERIL 141
Query: 233 --------VTFSTYSTMYAGLASIMTCLVFLYMLG 259
F +++ L IM ++ +Y+
Sbjct: 142 RWLESFKYDEFGSWAEWVGALGQIMIAVLAVYVAW 176
>gi|159027848|emb|CAO87061.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 420
Score = 41.0 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 48/155 (30%), Gaps = 39/155 (25%)
Query: 125 MRSWYITRLISF-----GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
R+ R++ G L L++M+ V L + L +L +I+ +
Sbjct: 41 SRNPLRQRILLLKDLRPGNAGLLLAPLMVMTIGLVFSWDWLGFSGAIVAILISLQVILPS 100
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI------- 232
R + H P+ + +F +I ++ Y+
Sbjct: 101 IRQWIA-----------HYLTPSERQ--------TVFAFIVFIAALAGLGKYLGVYERIL 141
Query: 233 --------VTFSTYSTMYAGLASIMTCLVFLYMLG 259
F +++ L IM ++ +Y+
Sbjct: 142 RWLDSFKYDEFGSWAEWVGALGQIMIAVLAVYVAW 176
>gi|171909856|ref|ZP_02925326.1| GMC oxidoreductase [Verrucomicrobium spinosum DSM 4136]
Length = 1713
Score = 41.0 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 10/127 (7%)
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA-TMLALFIG 192
++ + + +V LV+ S +F LA +K G +L + LAL +G
Sbjct: 968 LAVFWCNIFTVYLVVGSLLFGLFGLAALVTKKLDLPNGPFVLAGQLSPWWVLPALALALG 1027
Query: 193 LI---FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ + P S P +F W+ + G+V S S Y A +
Sbjct: 1028 VLPGTLANWLAPKGGST-RPYSPYGLFAWLVLLTGSVA-----ALTSPVSLPYGAGAGAI 1081
Query: 250 TCLVFLY 256
L +++
Sbjct: 1082 LLLTWVW 1088
>gi|154275988|ref|XP_001538839.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413912|gb|EDN09277.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 576
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Query: 137 GYVLLASVTLVIMSFVFVAIPLAL-AYVRKFFPALGNLLLIIWNGRI---YATMLAL--F 190
GY +A + ++I + L L +++ F ++ I++ R + + LA+ +
Sbjct: 344 GYGFMAVLAIIIYTLSLSIGALILGSHLAIFMDKYTPVIPYIFSRRYVDPFISFLAMGSW 403
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+G +F+ ++ P + G + + + LF Y+
Sbjct: 404 LGAVFLAIWPPDRSLGVREHWRGSVVFAVVFAPLGCLFRFYVS 446
>gi|147920953|ref|YP_685239.1| putative signal transduction histidine kinase [uncultured
methanogenic archaeon RC-I]
gi|110620635|emb|CAJ35913.1| putative signal transduction histidine kinase [uncultured
methanogenic archaeon RC-I]
Length = 616
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + Y+++A + + I + + + V F L +L IW R A
Sbjct: 13 RPVWALMAQYRQYLIVALILVCIAIALHFNLVYGIETVYTHFFYLPIILAAIWYYRK-AV 71
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
LALF+ + ++L + A SI+P I I +V A +
Sbjct: 72 FLALFLAGLHIYLGIEAT----GSIVPSTIIRAIMFVAVAAVIG 111
>gi|328851109|gb|EGG00267.1| putative aminophspholipid translocase [Melampsora larici-populina
98AG31]
Length = 1639
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 62/198 (31%), Gaps = 29/198 (14%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
F L LG F + V + PE + +V G
Sbjct: 1187 FYNVFWTLLPVLGIGIFDQDIRQRVLVSVPE------------LYSVGRDGKL-FGLKNF 1233
Query: 102 AYFSSNGVE-----ALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI 156
A++ + G+ IS AY RS I I+ ++ ++ +
Sbjct: 1234 AWYMAQGIYQGAVCYFFISF--AYDTTSPRSDGIDVNINEVSTVVIVAVIIACNAFHALN 1291
Query: 157 PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF---VHLFLPAAKSKIMSILPG 213
A F +G +L++++ A + ++ +L+ G
Sbjct: 1292 QFAWNTFMTVFVLVGPVLIVLYTAVYSAFKPSFIWTTVYGNNYYLWAAP------YWWFG 1345
Query: 214 VIFTWISWVVGAVLFTHY 231
++FT + ++ L +Y
Sbjct: 1346 ILFTVVLCLLPGYLVKYY 1363
>gi|83814181|ref|YP_446380.1| PAS domain-containing protein [Salinibacter ruber DSM 13855]
gi|294508317|ref|YP_003572375.1| PAS domain S-box protein [Salinibacter ruber M8]
gi|83755575|gb|ABC43688.1| PAS domain S-box protein [Salinibacter ruber DSM 13855]
gi|294344645|emb|CBH25423.1| PAS domain S-box protein [Salinibacter ruber M8]
Length = 1155
Score = 41.0 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 45/132 (34%), Gaps = 18/132 (13%)
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+TL+ + + PL + + + +W A +L + ++
Sbjct: 32 LLTLLGAVLILLFGPL-------YAATNPDAVDPLWARLGVAGLLGALVPASYLSR---H 81
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLASIMTC-------LVF 254
+ + +S L G +F + W+V H+ F+ Y + + + + +
Sbjct: 82 VRHRFVSWLRGALFIVLVWLVATTTLNHFAGEFAVGLLLGYTIIVAFVGVSAQSGRPVTW 141
Query: 255 LYMLGVFFILGA 266
L + + G
Sbjct: 142 FPALSLALVGGG 153
>gi|160901435|ref|YP_001567017.1| mechanosensitive ion channel protein MscS [Delftia acidovorans
SPH-1]
gi|160367019|gb|ABX38632.1| MscS Mechanosensitive ion channel [Delftia acidovorans SPH-1]
Length = 417
Score = 41.0 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 37/96 (38%)
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+V+ + A P ++ + I Q+ A + ++ Y + + AL ++N A
Sbjct: 61 DSVLQRLAKAVPSLVMQSGVQAIPQLQPQWATLILNLAIACTIYHVARVISALLNAMNEA 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+ + E R I L + +I + VA
Sbjct: 121 HELKEERKATQAHSIKSYVQLGKLLVFLIAIVLIVA 156
>gi|297195883|ref|ZP_06913281.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297152979|gb|EFH32078.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 282
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 80/238 (33%), Gaps = 31/238 (13%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ A + L++ P ++ A + A +A+ DE+
Sbjct: 23 ELMHRAMGFAALGFLTLVPLLIVVAA-----TDPASGQGFARWMSQAL--GLAESSQDEV 75
Query: 83 LQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
++ +P + L A A F A++ + + + + R + T ++
Sbjct: 76 ERLFGLPRQALQRTTAFGLAALAVFGLTFGSAVQTTYEKVWDLPAAR--WHTMWRHVVWL 133
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
+ V L+I + L+ L +L W +
Sbjct: 134 GMLIVYLMIFVSTPLPGESVLSLAIGAIGDLAGTVLFFWASQRVLL-------------- 179
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYAGLASIMTCLVFL 255
+ + ++LPG + T I+ ++G +F+ + + ++ + Y +++ +L
Sbjct: 180 --CGRVRWRALLPGAVATAIA-LLGLRVFSQLVFSPLIASNAVTYGPFGTVLVVQSWL 234
>gi|315634607|ref|ZP_07889891.1| YjgP/YjgQ family membrane protein [Aggregatibacter segnis ATCC
33393]
gi|315476555|gb|EFU67303.1| YjgP/YjgQ family membrane protein [Aggregatibacter segnis ATCC
33393]
Length = 355
Score = 41.0 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 14/127 (11%)
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L +L S + +A++++ N L W + + + + L +F
Sbjct: 233 LGVASLRPTSLSISGLSNYIAFLKETGQDSRNFELTYWRKLLQPVSVGVMMMLALSFIFG 292
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYAG---LASIMTCLVFL 255
P + S+ G + + F Y+V F +S +Y + ++M ++FL
Sbjct: 293 P-----LRSVTAGARI----LIGISFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFL 343
Query: 256 YMLGVFF 262
+
Sbjct: 344 LITWWLL 350
>gi|317149254|ref|XP_001823251.2| calcium-transporting ATPase 3 [Aspergillus oryzae RIB40]
Length = 1086
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 38/252 (15%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALL---------SVFPF---------IVFGANLAGFL 53
++D I+ F+ + + + L + S+FP +V + LA L
Sbjct: 801 LFDNIQKFLMHLLISNIAQVVLLLIALAFKDAEGNSIFPLSPLEILWANLVTSSFLAIGL 860
Query: 54 GAHQFVPTVIDVVFGAWPEVIA--KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA 111
G + P ++ + + ITD++ + L ++ + Y NG +
Sbjct: 861 GLEEAQPDIMYRPPHDLKVGVFTWELITDKM--IYGTCMGSLCLVAFVCVIYGKGNGTSS 918
Query: 112 LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ N A+ + R + Y L + LV V +P
Sbjct: 919 MGHDCNEAWNESCR---IVFRARATTYATLTFLLLVTAWEVKHFSRSLFNLDPGRYPGKL 975
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAA-----KSKIMSILPGVIFTWIS------ 220
++ IW R + + F ++LPA K + + GV+F +
Sbjct: 976 SVFHSIWRNRFLFWAVVAGFVIAFPVIYLPAVNRIVFKHQAIDWEWGVVFGCVVVYLTMV 1035
Query: 221 --WVVGAVLFTH 230
W F
Sbjct: 1036 EIWKAMKRAFGI 1047
>gi|213029561|ref|ZP_03344008.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 122
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGAW 70
+ + E++ +A +++ +LLS+ P I L V + +F +
Sbjct: 20 LKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQLRHFIFANF 79
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
I I Q +A K + + A + + A+
Sbjct: 80 MPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAI 120
>gi|195379302|ref|XP_002048419.1| GJ11362 [Drosophila virilis]
gi|194155577|gb|EDW70761.1| GJ11362 [Drosophila virilis]
Length = 903
Score = 40.6 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 48/137 (35%), Gaps = 27/137 (19%)
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFV----AIPLALAYVRKFFPALGNLLLII 177
V E+R ++I +V L+ F+FV IP+ + L + L
Sbjct: 43 VDEIRDFFIEYYY-ICFVAFILAVLLFGIFIFVEKLRYIPVLNFIICLIIVELQIIALFA 101
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIF---------TWISWVVGAVLF 228
R Y L +F + FV L+L IL G + I ++VG +
Sbjct: 102 LVARTYWMDLIIFFVICFVLLWL--------FILIGSVLPRKLDLTLDVAILFIVGFLFL 153
Query: 229 THYIVTFSTYSTMYAGL 245
+ Y MY L
Sbjct: 154 AI-----AIYFLMYRFL 165
>gi|238494748|ref|XP_002378610.1| P-type ATPase, putative [Aspergillus flavus NRRL3357]
gi|220695260|gb|EED51603.1| P-type ATPase, putative [Aspergillus flavus NRRL3357]
Length = 1086
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 38/252 (15%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALL---------SVFPF---------IVFGANLAGFL 53
++D I+ F+ + + + L + S+FP +V + LA L
Sbjct: 801 LFDNIQKFLMHLLISNIAQVVLLLIALAFKDAEGNSIFPLSPLEILWANLVTSSFLAIGL 860
Query: 54 GAHQFVPTVIDVVFGAWPEVIA--KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA 111
G + P ++ + + ITD++ + L ++ + Y NG +
Sbjct: 861 GLEEAQPDIMYRPPHDLKVGVFTWELITDKM--IYGTCMGSLCLVAFVCVIYGKGNGTSS 918
Query: 112 LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ N A+ + R + Y L + LV V +P
Sbjct: 919 MGHDCNEAWNESCR---IVFRARATTYATLTFLLLVTAWEVKHFSRSLFNLDPGRYPGKL 975
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAA-----KSKIMSILPGVIFTWIS------ 220
++ IW R + + F ++LPA K + + GV+F +
Sbjct: 976 SVFHSIWRNRFLFWAVVAGFVIAFPVIYLPAVNRIVFKHQAIDWEWGVVFGCVVVYLTMV 1035
Query: 221 --WVVGAVLFTH 230
W F
Sbjct: 1036 EIWKATKRAFGI 1047
>gi|213621039|ref|ZP_03373822.1| hypothetical protein SentesTyp_27477 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 205
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 68/204 (33%), Gaps = 10/204 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPEVIAKPITDEILQ 84
+ I+ + LS+ P ++ AGF+ + + + + +
Sbjct: 2 FGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMNVSDPTLASTLKNTIN 61
Query: 85 VLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRVVEMRS-----WYITRLISFGY 138
+ + A Y N + LR ++ ++ V E + ++ L F
Sbjct: 62 TAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQDQEKIWLKYLRDFIS 121
Query: 139 VLLASVTLVIMSFVFVAIPLALAYV--RKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
++ + L+I + A + + ++ L + ++ A ++ ++
Sbjct: 122 LIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIGLAISIFANYLLFFWI 181
Query: 197 HLFLPAAKSKIMSILPGVIFTWIS 220
LP + + +++ G I
Sbjct: 182 FWRLPRHRPRKKALIRGTFIAAIG 205
>gi|169845935|ref|XP_001829685.1| hypothetical protein CC1G_11421 [Coprinopsis cinerea okayama7#130]
gi|116509241|gb|EAU92136.1| hypothetical protein CC1G_11421 [Coprinopsis cinerea okayama7#130]
Length = 422
Score = 40.6 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R I FG LL ++ + S F+A A F + + + + AT +
Sbjct: 11 VRIRTIIFGISLLFTLIALGTSAAFIAFVDKGAKALGFLGGSSSFNVGSFAHLVLATSVI 70
Query: 189 LFIGLIFVHLFLPAAKSKIMSI----LPGVIFTWISWVVGA 225
I + ++ F + + LP + WI W+ A
Sbjct: 71 TLISVPLLYWFGRQKHATFKAQIFVELPSICIIWILWIASA 111
>gi|240278496|gb|EER42002.1| chromosome condensation protein [Ajellomyces capsulatus H143]
gi|325090588|gb|EGC43898.1| chromosome condensation protein [Ajellomyces capsulatus H88]
Length = 576
Score = 40.6 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 137 GYVLLASVTLVIMSFVFVAIPLAL-AYVRKFFPALGNLLLIIWNGRI---YATMLAL--F 190
GY +A + ++I + L L +++ F ++ I++ R + + LA+ +
Sbjct: 344 GYSFMAVLAIIIYTLSLSIGALILGSHLAIFMDKYTPVIPYIFSRRYVDPFISFLAMGSW 403
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+G +F+ ++ P + G + + LF Y+
Sbjct: 404 LGAVFLAIWPPDRSLGVREHWRGSAVFAVVFAPLGCLFRFYVS 446
>gi|182440259|ref|YP_001827978.1| hypothetical protein SGR_6466 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178468775|dbj|BAG23295.1| putative membrane protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 1472
Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 25/162 (15%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
++ A + ALR++ A R L + Y L + T+V+ S
Sbjct: 119 WLSLIVATAFW------GALRLAERLAVGSPATR-----LLGALAYALWPTYTIVVGSTS 167
Query: 153 FVAIPLAL---AYVRKFFPALGNLLLIIWNGRIYATM----------LALFIGLIFVHL- 198
A+P AL + P L + + + M L +GL +
Sbjct: 168 AAALPGALLPWVLLPLTNPRLAPRVAAARSALLIPLMGGVNAASTLASLLPVGLYLLSRP 227
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
P ++ + +PGVI W+V +L + F Y
Sbjct: 228 GGPRKRALLAWWIPGVILATAWWIVPLLLLGTFGENFMPYVE 269
>gi|171463569|ref|YP_001797682.1| putative ribonuclease BN [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193107|gb|ACB44068.1| putative ribonuclease BN [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 134
Score = 40.2 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 37/90 (41%)
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A + + V+ LP AK G + +++ + F ++ + Y +Y
Sbjct: 32 IAPICLAVVVYAVVYKVLPYAKILWCDAFTGALAPALAFELMKFGFAIFLSHTAFYKMVY 91
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
A L+++YM ++GA L A++
Sbjct: 92 GAFAIFPLGLMWIYMTWWITLIGAVLVANL 121
>gi|257869124|ref|ZP_05648777.1| HD domain-containing protein [Enterococcus gallinarum EG2]
gi|257803288|gb|EEV32110.1| HD domain-containing protein [Enterococcus gallinarum EG2]
Length = 733
Score = 40.2 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 77/184 (41%), Gaps = 19/184 (10%)
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
LQ+L + ++ +A + ++ + L Y + ++ YV+
Sbjct: 276 LQLLGLTSQTFSVFPLIALVFTAALQMLMLF------YYTRQTKNEDKRMNAVTFYVIAM 329
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
++++M F + +A++ FFPA L+L I++ R + A+F + + ++
Sbjct: 330 IFSILLMKFFQLFQSELIAFIPLFFPAAFTPLILNIFSSRRLGILAAMFQVINAIFIYFD 389
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLASIMTCLVFLYMLGV 260
++ + + T + + LF+ + T + G +IM +VF ++L V
Sbjct: 390 SSGTN--------MLTTV---LVTYLFSGLMGTMIRRERIASQGRTAIMWVIVFPFLLSV 438
Query: 261 FFIL 264
++
Sbjct: 439 MLVI 442
>gi|156358444|ref|XP_001624529.1| predicted protein [Nematostella vectensis]
gi|156211315|gb|EDO32429.1| predicted protein [Nematostella vectensis]
Length = 885
Score = 40.2 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 22/169 (13%)
Query: 128 WYITRLISFGY-----VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + R+ GY ++A+ TL ++ + Y + L IW I
Sbjct: 659 FMVVRVFDTGYNRIKRYIIAAWTLPVVIVIVTLASSFDGYGTEHSCWLSVERGTIWGFVI 718
Query: 183 YATMLALFIGLIF---------VHLFLPAAKSKIMSILPGVIFTWIS--WVVGAVLFTHY 231
++ L G I +H A +K+ ++ GV + + +F
Sbjct: 719 PVLIIVLTNGTILGMVVREILQLHTPANADDNKLSTVRSGVKSAMVLLPILGVTWVFGVL 778
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
V +Y+ ++ L +I + + F+ LN+ + ++RKK
Sbjct: 779 AVN--SYTLVFQYLFAIFNSMQGFF----IFVFHCLLNSEVRKAFYRKK 821
>gi|326780921|ref|ZP_08240186.1| Protein of unknown function DUF3367 [Streptomyces cf. griseus
XylebKG-1]
gi|326661254|gb|EGE46100.1| Protein of unknown function DUF3367 [Streptomyces cf. griseus
XylebKG-1]
Length = 1470
Score = 40.2 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 25/162 (15%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
++ A + ALR++ A R L + Y L + T+V+ S
Sbjct: 119 WLSLIVATAFW------GALRLAERLAVGSPATR-----LLGALAYALWPTYTIVVGSTS 167
Query: 153 FVAIPLAL---AYVRKFFPALGNLLLIIWNGRIYATM----------LALFIGLIFVHL- 198
A+P AL + P L + + + M L +GL +
Sbjct: 168 AAALPGALLPWVLLPLTNPRLAPRVAAARSALLIPLMGGVNAASTLASLLPVGLYLLSRP 227
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
P ++ + +PGVI W+V +L + F Y
Sbjct: 228 GGPRKRALLAWWIPGVILATAWWIVPLLLLGTFGENFMPYVE 269
>gi|322689548|ref|YP_004209282.1| hypothetical protein BLIF_1365 [Bifidobacterium longum subsp.
infantis 157F]
gi|320460884|dbj|BAJ71504.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 227
Score = 40.2 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 87/224 (38%), Gaps = 6/224 (2%)
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VE 110
+G + +ID V P V +T L ++ A ++ LA +++ G +
Sbjct: 1 MVGNIDWQQMLIDAVREVIPGVADSFLTSSALGTMS-SALTWTGLATLAIFWWTVTGWMN 59
Query: 111 ALRISLNRAY-RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
+LR ++ + + + + RL + ++ ++ + + + ++
Sbjct: 60 SLRHAVRAMFDDCGDELNIVVARLRDTLAAIAIAILFILSTVAGTVSGGIVRRLLQWGGI 119
Query: 170 LGNLL--LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
+ L ++ + T +AL L + L + + + G + ++ V L
Sbjct: 120 PSSSLPGTVLLEMTGFGTGVALNFALFILLLRVVSHIKAGRFTILGALLGSLT-VSAMQL 178
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
++ ++ + M A A+++ L++ ++ +L A L A
Sbjct: 179 LGARLLAGASRNPMLAPFAALIGVLIWFNLVAQVILLCAALIAE 222
>gi|262201112|ref|YP_003272320.1| hypothetical protein Gbro_1119 [Gordonia bronchialis DSM 43247]
gi|262084459|gb|ACY20427.1| hypothetical protein Gbro_1119 [Gordonia bronchialis DSM 43247]
Length = 325
Score = 39.8 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 86/268 (32%), Gaps = 27/268 (10%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + + A ++ A + P ++ L G + +
Sbjct: 46 LLIRILGDIARGNITDRAMTLAAQAFTGILPIVILLTTLPGSSVIDTSLAKL-------- 97
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + + + T + A + G +L +L R Y + W +
Sbjct: 98 -----GIHGGNVDFLSSADTTTVGTFGLIGALMTIA-GATSLSRALGRMYVSI----WQV 147
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLA-LAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
T+L G+ V I V V L+ F + + L+ I T L
Sbjct: 148 TKLPLKGWWRWVVVIFTIPVAVTVQGMSTDLSSNTIFGVHIDDSGLLGIGLVIVVTFLIW 207
Query: 190 FIGLIFVHLFLPAAKSKIMSI-LPGVI---FTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
I V L +A+ + + L G + + V V+ + + + Y L
Sbjct: 208 TITWTLVPRLLVSAQVPLRLLTLNGAVTGALITVLMVGSRVVMPRIMNNTTQH---YGTL 264
Query: 246 ASIMTCLVFLYMLGVFFILGAEL-NASM 272
+ + +L++ ++ A + NA +
Sbjct: 265 GVVFIAISWLFIFAGILVVTALVTNAVI 292
>gi|290082966|gb|ADD22991.1| ATP-binding cassette transporter G family ABCG-96 protein
[Toxoplasma gondii]
Length = 1045
Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 14/168 (8%)
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR--LISFGYVLLASVTLVIMSFVFV 154
LAA Y VE + + L A RV + + Y L Y + AS I FV
Sbjct: 735 GTLAAIY-CDAAVEGVILGLVMA-RVRQTQPPYYQLSALFLLVYCVCASALWTIPLFVQQ 792
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYA--TMLALFIGLIFVHLFLPAAKSKIMSILP 212
L + ++ AL + L + + LF L F+ F + LP
Sbjct: 793 KAQLIMEVTGGYYSALPHYLATTSVSACVVGGSDVVLFSILWFLAGFE-------WTALP 845
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+F + + Y+ + ++ S +A + + ++F ++ G
Sbjct: 846 FSLFVSLLAFLVVDG-AFYLASIASSSFAHANSVTAVAFMLFTFVNGF 892
>gi|237838061|ref|XP_002368328.1| ABC transporter, putative [Toxoplasma gondii ME49]
gi|211965992|gb|EEB01188.1| ABC transporter, putative [Toxoplasma gondii ME49]
Length = 1045
Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 14/168 (8%)
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR--LISFGYVLLASVTLVIMSFVFV 154
LAA Y VE + + L A RV + + Y L Y + AS I FV
Sbjct: 735 GTLAAIY-CDAAVEGVILGLVMA-RVRQTQPPYYQLSALFLLVYCVCASALWTIPLFVQQ 792
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYA--TMLALFIGLIFVHLFLPAAKSKIMSILP 212
L + ++ AL + L + + LF L F+ F + LP
Sbjct: 793 KAQLIMEVTGGYYSALPHYLATTSVSACVVGGSDVVLFSILWFLAGFE-------WTALP 845
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+F + + Y+ + ++ S +A + + ++F ++ G
Sbjct: 846 FSLFVSLLAFLVVDG-AFYLASIASSSFAHANSVTAVAFMLFTFVNGF 892
>gi|71061806|gb|AAZ20818.1| ATP-binding cassette, sub-family G, member 4 [Toxoplasma gondii]
Length = 992
Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 14/168 (8%)
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR--LISFGYVLLASVTLVIMSFVFV 154
LAA Y VE + + L A RV + + Y L Y + AS I FV
Sbjct: 682 GTLAAIY-CDAAVEGVILGLVMA-RVRQTQPPYYQLSALFLLVYCVCASALWTIPLFVQQ 739
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYA--TMLALFIGLIFVHLFLPAAKSKIMSILP 212
L + ++ AL + L + + LF L F+ F + LP
Sbjct: 740 KAQLIMEVTGGYYSALPHYLATTSVSACVVGGSDVVLFSILWFLAGFE-------WTALP 792
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+F + + Y+ + ++ S +A + + ++F ++ G
Sbjct: 793 FSLFVSLLAFLVVDG-AFYLASIASSSFAHANSVTAVAFMLFTFVNGF 839
>gi|146291110|sp|Q333S9|CNR1_RANES RecName: Full=Cannabinoid receptor 1; Short=CB-R; Short=CB1
gi|78321980|emb|CAJ34534.1| type-1 cannabinoid receptor [Rana esculenta]
Length = 462
Score = 39.8 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 12/142 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + + P LF + + A++ +S G +++R + R R+
Sbjct: 163 VYSFVDFHVFHRIDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLSYKRI 219
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 220 VTRTKAVIAFCMMWTIAIVIAVLPLLGWNCKKLKSVCSDIFPLIDETYLMFWIG--VTSV 277
Query: 187 LALFIGLIFVHLFLPAAKSKIM 208
L LFI ++++ A +
Sbjct: 278 LLLFIVYAYMYILWKAHHHAVR 299
>gi|225556016|gb|EEH04306.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 576
Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 137 GYVLLASVTLVIMSFVFVAIPLAL-AYVRKFFPALGNLLLIIWNGRI---YATMLAL--F 190
GY +A + ++I + L L +++ F ++ I++ R + + LA+ +
Sbjct: 344 GYSFMAVLAIIIYTLSLSIGALILGSHLAIFMDKYTPVIPYIFSRRYVDPFISFLAMGSW 403
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+G +F+ ++ P + G + + LF Y+
Sbjct: 404 LGAVFLAIWPPDRSLGVREHWRGSAMFAVVFAPLGCLFRFYVS 446
>gi|268536258|ref|XP_002633264.1| C. briggsae CBR-TAG-144 protein [Caenorhabditis briggsae]
Length = 1397
Score = 39.8 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 21/163 (12%)
Query: 41 PFIVFGAN---LAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTIS 97
P+ + +N + + +D G ++ + ++ P+ L
Sbjct: 397 PYSIDLSNPQPILPLIFGPIDAEDKMDTAMG------YDVYSNVLADIVCEPSLSLPLTI 450
Query: 98 ALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP 157
L A + +G AL L A R W +S + L ++ +I F
Sbjct: 451 GLYAKW--GSGKSALLAKLKEAMHSF-SRDWLDGVSLSLSFALFFAIFTIIGMFSLTFTM 507
Query: 158 LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ A+ N + + + I+ + +F L+ V +
Sbjct: 508 MI---------AISNSITYLVSWAIFLFIFIVFCALLIVVYYG 541
>gi|328887356|emb|CCA60595.1| integral membrane protein [Streptomyces venezuelae ATCC 10712]
Length = 289
Score = 39.8 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 168 PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
PA +I ++ F+ + FL + + ++ PG + T + ++G +
Sbjct: 167 PAPAESPAVITGLVAIGDLIGTFLFFWWSQRFLLCGRIRWRALAPGAVLTALG-LLGLRV 225
Query: 228 FTHYIVT--FSTYSTMYAGLASIMTCLVFL 255
F+ + + ++ + Y +++ +L
Sbjct: 226 FSQLVFSPLIASNAVTYGQFGTVLVLQSWL 255
>gi|99077759|emb|CAJ91112.1| type-1 cannabinoid receptor [Rana esculenta]
Length = 447
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 12/142 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + + P LF + + A++ +S G +++R + R R+
Sbjct: 163 VYSFVDFHVFHRIDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLSYKRI 219
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 220 VTRTKAVIAFCMMWTIAIVIAVLPLLGWNCKKLKSVCSDIFPLIDETYLMFWIG--VTSV 277
Query: 187 LALFIGLIFVHLFLPAAKSKIM 208
L LFI ++++ A +
Sbjct: 278 LLLFIVYAYMYILWKAHHHAVR 299
>gi|99077757|emb|CAJ91111.1| type-1 cannabinoid receptor [Rana esculenta]
Length = 447
Score = 39.8 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 12/142 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + + P LF + + A++ +S G +++R + R R+
Sbjct: 163 VYSFVDFHVFHRIDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLSYKRI 219
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 220 VTRTKAVIAFCMMWTIAIVIAVLPLLGWNCKKLKSVCSDIFPLIDETYLMFWIG--VTSV 277
Query: 187 LALFIGLIFVHLFLPAAKSKIM 208
L LFI ++++ A +
Sbjct: 278 LLLFIVYAYMYILWKAHHHAVR 299
>gi|294811111|ref|ZP_06769754.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|326439547|ref|ZP_08214281.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294323710|gb|EFG05353.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 284
Score = 39.8 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 6/71 (8%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYA 243
++ + L + + ++ PG + T + + +F+ ++ + ++ + Y
Sbjct: 180 LIGTCLFFWVAQRLLLGGRVRWRALFPGAVVTALCMLGL-RIFSQFVFSPLIASNAVTYG 238
Query: 244 GLASIMTCLVF 254
+++ +
Sbjct: 239 PFGTVLVLQSW 249
>gi|239985944|ref|ZP_04706608.1| hypothetical protein SrosN1_01422 [Streptomyces roseosporus NRRL
11379]
Length = 1430
Score = 39.4 bits (91), Expect = 0.50, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 25/162 (15%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
+I A + + E LR+ S L + Y L + T+V+ S
Sbjct: 121 WLSIIVATAFWGALRLAERLRVG-----------SPAARLLGAVVYALWPTYTIVVGSTS 169
Query: 153 FVAIPLAL---AYVRKFFPALGNLLLIIWNGRIYATM----------LALFIGLIFVHL- 198
A+P AL + P L + + + + M L +GL +
Sbjct: 170 AAALPGALLPWVLLPLTNPRLTPRIAAVRSTLLIPLMGGVNAASTLASLLPVGLYLLSRP 229
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
P + ++ +PGVI W+V +L + F Y
Sbjct: 230 GGPRKRGLLLWWIPGVIMATAWWIVPLLLLGTFGENFMPYVE 271
>gi|253314944|ref|ZP_04838157.1| hypothetical protein SauraC_01965 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
Length = 108
Score = 39.4 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 19/35 (54%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV 44
+ + I ++D +A+ ++ +L++FP ++
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLL 106
>gi|291295464|ref|YP_003506862.1| ribonuclease BN [Meiothermus ruber DSM 1279]
gi|290470423|gb|ADD27842.1| ribonuclease BN [Meiothermus ruber DSM 1279]
Length = 297
Score = 39.4 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 47/294 (15%), Positives = 104/294 (35%), Gaps = 42/294 (14%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA------HQFVPT 61
+ II + + A+ ++ AL S+ P ++ A + GF+ + + +
Sbjct: 1 MLHIIGQVYQLYTRSHIPFFAAALAYYALFSLMPLLILLAGVFGFVLSGNEGLRNAVLVR 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+I++V +P + ++ L A L S L + SSN AL +L +
Sbjct: 61 LIELVVLLFPTQ--PDLAQTLVNFLTRGAFPLTLASLLVLLWASSNFFAALAYALGIIFG 118
Query: 122 VVEMRS---------------------------WYITRLISFGYVLLASVTLVIMSFVFV 154
V R R+ LL + L++++ + +
Sbjct: 119 GVAPRPEPAIPPTPTAKARPPQRAFGRAAALLTALRGRIAGLLAPLLLGLALILLALLGL 178
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
+ L Y+ L N ++ +L + ++ LP ++++ +
Sbjct: 179 VMGFVLRYLPAELSFLRNGTEVV------VPILGAMLLFFLTYMLLPIPTPRVLAAMAAA 232
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++W + ++ + Y +Y +A + LV Y+ ++GA L
Sbjct: 233 TLAALAWEGLRLGLPL-LLPRTQYELIYGPIAGFLLALVGFYLTMWILLVGAVL 285
>gi|209876223|ref|XP_002139554.1| adenylate and guanylate cyclase catalytic domain-containing protein
[Cryptosporidium muris RN66]
gi|209555160|gb|EEA05205.1| adenylate and guanylate cyclase catalytic domain-containing protein
[Cryptosporidium muris RN66]
Length = 3698
Score = 39.4 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 52/164 (31%), Gaps = 17/164 (10%)
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA 111
++ ++ + ++ +F I + + GL T+SA Y + + +
Sbjct: 1935 YISWVNYIQSFLEGLFLGIVSFYLGLIVTYSSPFSSAKSTGLPTLSAALTLYSAFGPLLS 1994
Query: 112 LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ +N F + L+ + + ++ F+ + + FF
Sbjct: 1995 FFMKVNSI-------------PWPFLFFLILTPSTFVILLAFINTHNLVQWSEIFFTGFE 2041
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHL----FLPAAKSKIMSIL 211
L ++ + + + I +L F P + S
Sbjct: 2042 FLGSTLFILTLPLLFMCIVIFNTIWYLLINAFYPNPVYSLRSWW 2085
>gi|126316406|ref|XP_001380619.1| PREDICTED: similar to MARVEL domain containing 2 [Monodelphis
domestica]
Length = 532
Score = 39.4 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 19/112 (16%)
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHL--FLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+L++ T++ L +G+ + L A + G+ + A +
Sbjct: 236 PFVLVVAGLAWVVTVILLVLGMSMYYRTILLDAGWWPLTEF--GINVALFVLYMAAAI-- 291
Query: 230 HYIVTFSTYSTMYAGL-------------ASIMTCLVFLYMLGVFFILGAEL 268
Y+ + Y L + ++FL++ + +++GA +
Sbjct: 292 VYVNDTNRGGLCYYPLFNTPLNASFCRVEGGQIAAMIFLFVTMIVYLIGAVV 343
>gi|46119588|ref|XP_384956.1| hypothetical protein FG04780.1 [Gibberella zeae PH-1]
Length = 692
Score = 39.4 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 17/160 (10%)
Query: 111 ALRISLNRA-----YRVVEMRSWY---ITRLISFGY--VLLASVTLVIMSFVFVAIPLAL 160
A+ + LN YR + W+ LI++ + TL+ + VF + L
Sbjct: 237 AIFVVLNVVLTAIGYRTAQPNGWFTSSWQELIAYLLYRTGAFAFTLLPVLLVFSSRNNLL 296
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
++ + LLL W GR++ L + K + G +
Sbjct: 297 LWITNWSHP-TYLLLHRWIGRLFTLYAVLHSIFGLLAY---RHYEKTVWWAWGAA-ATVF 351
Query: 221 WVVGAVLFTHYIV--TFSTYSTMYAGLASIMTCLVFLYML 258
VV +V Y+ + + ++ L+ I+ + +++
Sbjct: 352 SVVLSVGSGLYVRRKNYEVFLLVHIILSVIIIVGCWYHLV 391
>gi|330466315|ref|YP_004404058.1| ribonuclease BN [Verrucosispora maris AB-18-032]
gi|328809286|gb|AEB43458.1| ribonuclease BN [Verrucosispora maris AB-18-032]
Length = 282
Score = 39.4 bits (91), Expect = 0.56, Method: Composition-based stats.
Identities = 52/283 (18%), Positives = 90/283 (31%), Gaps = 13/283 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M E + I A D A+ I+ ++V P + L + V
Sbjct: 1 MGEAWRRTKRITRAAFRPVRGRDLSLHAAAITFYGAIAVVPVALLAIWLTTLVAGADRVR 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ A P+ I P + L L ALAA +S E LR +
Sbjct: 61 RLTSYAVEALPDAIGAP---HAVAALVEAGVDLTPWLALAAVLPASLYGEGLRRAFVSVA 117
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R LLA ++++ + R + ++L
Sbjct: 118 APRSDEHLIGWRGRLLLLPLLAPAPALLLAVLLALPTTTGLVRRGGWAGALGVVLSF--- 174
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A L L L++V + A +S L FT + F +
Sbjct: 175 --LAVWLVLTPVLLWVFRVVGRASPDWLSALLVGSFTAANLSGFLHGFVLFASLPLDLGV 232
Query: 241 MYAGL---ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ GL + + L++LY+ V + G +A++ + WR +
Sbjct: 233 PFGGLDEVGAAVAILLWLYVFHVIVLAG--YSATLALSGWRDR 273
>gi|291243303|ref|XP_002741542.1| PREDICTED: ankyrin-like protein 1-like [Saccoglossus kowalevskii]
Length = 1054
Score = 39.4 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 16/131 (12%)
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
V I F++ I + V F + I + A F PA
Sbjct: 730 MVIFEISIFLYCFINVMRELVEIFKTGMKYFSEIANGIDWCLYVSASVFV------FPPA 783
Query: 203 AKSKIMSILPGVIFTWISWVVGAV------LFTHYIVTFSTYSTMYAGLASIMTCLVFL- 255
K + G + + SW+ + LF YIV F Y + + L +++ +F+
Sbjct: 784 QKPCAVQWTAGAVAAFFSWMNLIMYVRRVDLFGIYIVMF--YEVVKSFLKAVVVFFLFVM 841
Query: 256 -YMLGVFFILG 265
+ +LG
Sbjct: 842 AFATSFSILLG 852
>gi|115640567|ref|XP_789625.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115965163|ref|XP_001179484.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 809
Score = 39.4 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 62/163 (38%), Gaps = 23/163 (14%)
Query: 120 YRVVEMRS-WYITRLISFGYVLLASV-TLVIMSFVFVAIP------LALAYVRKFFPALG 171
Y+ R ++I+ ++ F V+L + +L I +V LA + +
Sbjct: 384 YKNKSTRPIYWISLILHFLLVVLVTGHSLFIPPPFYVQANPEGNNYTWLANGKSKWQENL 443
Query: 172 NLLLIIWNGRIYATMLALFIGLIF---VHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVL 227
N+ ++ GR+ A ++ FI + F V+ FL + + SI G I ++ ++ +L
Sbjct: 444 NIFALVLFGRVGAWIILAFIVIYFIEFVYRFLIYRHTMLNSIRGVGSIVREVALMIFTIL 503
Query: 228 FTHYIVTFSTYSTMYA---------GLASIMTCLVFLYMLGVF 261
F + S Y L + L + +
Sbjct: 504 FI--VPDLGDLSYGYGVNLKPHWQWQLGAFAVFLTWFNFILFL 544
>gi|221505621|gb|EEE31266.1| ABC transporter, putative [Toxoplasma gondii VEG]
Length = 1064
Score = 39.4 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 14/168 (8%)
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR--LISFGYVLLASVTLVIMSFVFV 154
LAA Y VE + + L A RV + + Y L Y + AS I FV
Sbjct: 735 GTLAAIY-CDAAVEGVILGLVMA-RVRQTQPPYYQLSALFLLVYCVCASALWTIPLFVQQ 792
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYA--TMLALFIGLIFVHLFLPAAKSKIMSILP 212
L + ++ AL + + + + LF L F+ F + LP
Sbjct: 793 KAQLIMEVTGGYYSALPHYVATTSVSACVVGGSDVVLFSILWFLAGFE-------WTALP 845
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+F + + Y+ + ++ S +A + + ++F ++ G
Sbjct: 846 FSLFVSLLAFLVVDG-AFYLASIASSSFAHANSVTAVAFMLFTFVNGF 892
>gi|221484406|gb|EEE22702.1| ABC transporter, putative [Toxoplasma gondii GT1]
Length = 1045
Score = 39.4 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 14/168 (8%)
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR--LISFGYVLLASVTLVIMSFVFV 154
LAA Y VE + + L A RV + + Y L Y + AS I FV
Sbjct: 735 GTLAAIY-CDAAVEGVILGLVMA-RVRQTQPPYYQLSALFLLVYCVCASALWTIPLFVQQ 792
Query: 155 AIPLALAYVRKFFPALGNLLLIIWNGRIYA--TMLALFIGLIFVHLFLPAAKSKIMSILP 212
L + ++ AL + + + + LF L F+ F + LP
Sbjct: 793 KAQLIMEVTGGYYSALPHYVATTSVSACVVGGSDVVLFSILWFLAGFE-------WTALP 845
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+F + + Y+ + ++ S +A + + ++F ++ G
Sbjct: 846 FSLFVSLLAFLVVDG-AFYLASIASSSFAHANSVTAVAFMLFTFVNGF 892
>gi|291442886|ref|ZP_06582276.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291345833|gb|EFE72737.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 1360
Score = 39.4 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 25/162 (15%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
+I A + + E LR+ S L + Y L + T+V+ S
Sbjct: 149 WLSIIVATAFWGALRLAERLRVG-----------SPAARLLGAVVYALWPTYTIVVGSTS 197
Query: 153 FVAIPLAL---AYVRKFFPALGNLLLIIWNGRIYATM----------LALFIGLIFVHL- 198
A+P AL + P L + + + + M L +GL +
Sbjct: 198 AAALPGALLPWVLLPLTNPRLTPRIAAVRSTLLIPLMGGVNAASTLASLLPVGLYLLSRP 257
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
P + ++ +PGVI W+V +L + F Y
Sbjct: 258 GGPRKRGLLLWWIPGVIMATAWWIVPLLLLGTFGENFMPYVE 299
>gi|218265679|ref|ZP_03478844.1| hypothetical protein PRABACTJOHN_04555 [Parabacteroides johnsonii
DSM 18315]
gi|218221437|gb|EEC94087.1| hypothetical protein PRABACTJOHN_04555 [Parabacteroides johnsonii
DSM 18315]
Length = 148
Score = 39.4 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E + + I A+ F E+ AS ++ S LLS+ P + +A G F
Sbjct: 39 LKELYINIIKTIILAVRGFQSENLQTKASALTYSTLLSIVPLLAVLLGIAKGFG---FQG 95
Query: 61 TVIDVVFGAWPEVIAKP--ITDEILQVLAVPAKG-LFTISALAAAYFSSNGVE 110
TV +F +P A+ + + LA G + + + Y N +
Sbjct: 96 TVRQELFDYFPGHEAELSKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLIS 148
>gi|12699836|gb|AAG37779.1| cannabinoid receptor 1 [Felis catus]
Length = 330
Score = 39.1 bits (90), Expect = 0.68, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 57/148 (38%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 119 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 175
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 176 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 233
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I PG
Sbjct: 234 LLLFIVYAYMYILWKAHSHAVRMIQPGT 261
>gi|325847865|ref|ZP_08170087.1| hypothetical protein HMPREF9246_1796 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480883|gb|EGC83936.1| hypothetical protein HMPREF9246_1796 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 357
Score = 39.1 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
G+++ + T+L+L + + + +F P ++ I S+ GV + + ++ + +
Sbjct: 37 WGSIIAGAVSFAAVFTVLSLIVAALGLGIFSPNNENPISSMGIGVGISTVIILIISFGIS 96
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+I +S + L M+ + L + + G +
Sbjct: 97 GFIS--GAFSKGQSLLHGFMS-----WALSIILLFGLVI 128
>gi|302187807|ref|ZP_07264480.1| Band 7 protein [Pseudomonas syringae pv. syringae 642]
Length = 648
Score = 39.1 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 14/153 (9%)
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D + P + +L+ L+ K L + + + V AL +
Sbjct: 95 DTLDENLPAGDESGWYERLLERLSDSGKSLVRHVGSSTLWLAGWAVLALIVI-------- 146
Query: 124 EMRSWYITRL----ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
R+++ L +S L SV L++ + V + P G L ++
Sbjct: 147 --RAFWNLMLSGADLSTAGSLAGSVMLLLAFGLLVIERQLSSESDSQSPEAGALAQLVRM 204
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
I + AL + PA + ++ +LP
Sbjct: 205 TLIVLLIGALCLFFSSADRVWPARLAVLIGLLP 237
>gi|53690304|ref|ZP_00121873.2| COG1295: Predicted membrane protein [Bifidobacterium longum DJO10A]
Length = 234
Score = 39.1 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 33/224 (14%), Positives = 87/224 (38%), Gaps = 6/224 (2%)
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VE 110
+G + +ID V P V +T L ++ A ++ LA +++ G +
Sbjct: 8 MVGNIDWQQMLIDAVREVIPGVADSFLTSSALGTMS-SALTWTGLATLAIFWWTVTGWMN 66
Query: 111 ALRISLNRAY-RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
+LR ++ + + + + RL + ++ ++ + + + ++
Sbjct: 67 SLRHAVRAMFDDCGDELNIVVARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGI 126
Query: 170 LGNLL--LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
+ L ++ + T +AL L + L + + + G + ++ V L
Sbjct: 127 PSSSLPGTVLLEMTGFGTGVALNFALFMLLLRVVSHIKAGRFTILGALLGSLT-VSAMQL 185
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
++ ++ + M A A+++ L++ ++ +L A L A
Sbjct: 186 LGARLLAGASRNPMLAPFAALIGVLIWFNLVAQVILLCAALIAE 229
>gi|239939456|ref|ZP_04691393.1| hypothetical protein SrosN15_00545 [Streptomyces roseosporus NRRL
15998]
Length = 1332
Score = 39.1 bits (90), Expect = 0.71, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 25/162 (15%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
+I A + + E LR+ S L + Y L + T+V+ S
Sbjct: 121 WLSIIVATAFWGALRLAERLRVG-----------SPAARLLGAVVYALWPTYTIVVGSTS 169
Query: 153 FVAIPLAL---AYVRKFFPALGNLLLIIWNGRIYATM----------LALFIGLIFVHL- 198
A+P AL + P L + + + + M L +GL +
Sbjct: 170 AAALPGALLPWVLLPLTNPRLTPRIAAVRSTLLIPLMGGVNAASTLASLLPVGLYLLSRP 229
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
P + ++ +PGVI W+V +L + F Y
Sbjct: 230 GGPRKRGLLLWWIPGVIMATAWWIVPLLLLGTFGENFMPYVE 271
>gi|300718986|ref|YP_003743789.1| phosphoethanolamine transferase [Erwinia billingiae Eb661]
gi|299064822|emb|CAX61942.1| Putative phosphoethanolamine transferase [Erwinia billingiae Eb661]
Length = 566
Score = 39.1 bits (90), Expect = 0.72, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 11/108 (10%)
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
S+ L +F+ IP+ + R+F P L + W + + + + L
Sbjct: 12 LSLMLAFYIGIFLNIPV---FYRRFDPFLAQFNAMQWFSAAVEVVAIVLLTFFLMRLLSL 68
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
K T + V+ +V ++Y+ F Y +AS+M
Sbjct: 69 GGKVFWR-------ITATALVLISVAASYYMS-FFNVVIGYGIVASVM 108
>gi|23011363|ref|ZP_00051745.1| hypothetical protein Magn03006001 [Magnetospirillum magnetotacticum
MS-1]
Length = 57
Score = 39.1 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + ++++ +LGAELNA M R
Sbjct: 2 IGFMTWIWLSTTVVLLGAELNAEMEHQTARD 32
>gi|308273258|emb|CBX29861.1| unknown protein [uncultured Desulfobacterium sp.]
Length = 121
Score = 39.1 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPT 61
E F +++ A+ F + G+ ++S I+ + L+S+ PFI+ L G +L Q V
Sbjct: 23 EKILKNFGLLWQALGKFNNDSGFFLSSGITFNILISLIPFIMLLLALVGTYLYNDQEVFN 82
Query: 62 VIDVVFGAWPEVIAKPITDEIL 83
I F + IT +L
Sbjct: 83 HIRAYFRDIAPALDPKITKNLL 104
>gi|254393296|ref|ZP_05008446.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|197706933|gb|EDY52745.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 266
Score = 39.1 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 6/71 (8%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYA 243
++ + L + + ++ PG + T + + +F+ ++ + ++ + Y
Sbjct: 162 LIGTCLFFWVAQRLLLGGRVRWRALFPGAVVTALCMLGL-RIFSQFVFSPLIASNAVTYG 220
Query: 244 GLASIMTCLVF 254
+++ +
Sbjct: 221 PFGTVLVLQSW 231
>gi|320594241|gb|EFX06644.1| ABC multidrug transporter [Grosmannia clavigera kw1407]
Length = 1549
Score = 38.7 bits (89), Expect = 0.85, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 56/164 (34%), Gaps = 8/164 (4%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
D + +S + S S+ + L LG + + V P V + ++
Sbjct: 471 DMISNSSDMFYSFTASLVSTALAMTFLYRLLGWPSLLGVAVLVCLTPLPVVFSGRVSRLH 530
Query: 83 LQVLAVPAKGLFTIS-ALAAA----YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+V+ L ++ L A YF V A +LN A R E R + L S
Sbjct: 531 RRVMQATDARLAQVAEFLGAVRTLKYFGWEPVAA--RALNEA-RATEQRQIWRRNLTSML 587
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + ++ V A + LA PA L I R
Sbjct: 588 VAMTGDMMSLVSLLVMFAAVVLLARQPLHAPAAFTALSITETLR 631
>gi|168699152|ref|ZP_02731429.1| putative carbohydrate translocase [Gemmata obscuriglobus UQM 2246]
Length = 779
Score = 38.7 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 44/134 (32%), Gaps = 8/134 (5%)
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-IWNGRIYATM 186
+ + L+++ L + ++ + + A + F P + +
Sbjct: 128 YNLYYLLTYPLTALTGMAVLRWLKLSLPAAAVGALLYAFLPYHQERFQYHFFLSAYWVVP 187
Query: 187 LALFIGL------IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L+L L + + P + PG ++T + + A Y F+
Sbjct: 188 LSLVPALAICKGELLLFPLAPDGSRRFRPFAPGALWTLVVGALTASA-GAYYAFFACAVY 246
Query: 241 MYAGLASIMTCLVF 254
+ GL +++ +
Sbjct: 247 AFVGLYAVVMFHTW 260
>gi|83771988|dbj|BAE62118.1| unnamed protein product [Aspergillus oryzae]
Length = 1074
Score = 38.7 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 29/217 (13%)
Query: 38 SVFPF---------IVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA--KPITDEILQVL 86
S+FP +V + LA LG + P ++ + + ITD++ +
Sbjct: 824 SIFPLSPLEILWANLVTSSFLAIGLGLEEAQPDIMYRPPHDLKVGVFTWELITDKM--IY 881
Query: 87 AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
L ++ + Y NG ++ N A+ + R + Y L + L
Sbjct: 882 GTCMGSLCLVAFVCVIYGKGNGTSSMGHDCNEAWNESCR---IVFRARATTYATLTFLLL 938
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA--- 203
V V +P ++ IW R + + F ++LPA
Sbjct: 939 VTAWEVKHFSRSLFNLDPGRYPGKLSVFHSIWRNRFLFWAVVAGFVIAFPVIYLPAVNRI 998
Query: 204 --KSKIMSILPGVIFTWIS--------WVVGAVLFTH 230
K + + GV+F + W F
Sbjct: 999 VFKHQAIDWEWGVVFGCVVVYLTMVEIWKAMKRAFGI 1035
>gi|297487580|ref|XP_002696327.1| PREDICTED: MARVEL domain containing 2 [Bos taurus]
gi|296475873|gb|DAA17988.1| MARVEL domain containing 2 [Bos taurus]
Length = 559
Score = 38.7 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 38/109 (34%), Gaps = 15/109 (13%)
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+L++ T++ L +G+ + + + G+ + + A + Y+
Sbjct: 256 FVLVVAGLAWVTTIIILVLGMSMYYRTILLDSNWWPLTEFGINVSLFILYMAAAI--VYV 313
Query: 233 VTFSTYSTMYAGL-------------ASIMTCLVFLYMLGVFFILGAEL 268
+ Y L + ++FL+ + +++GA +
Sbjct: 314 NDTNRGGLCYYPLFNTPVNAGFCRVEGGQIAAMIFLFFTMIVYLIGALV 362
>gi|171679177|ref|XP_001904536.1| hypothetical protein [Podospora anserina S mat+]
gi|170937660|emb|CAP62318.1| unnamed protein product [Podospora anserina S mat+]
Length = 886
Score = 38.7 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I +L + L + + I+ ++ + L+ + F L W+ +L
Sbjct: 630 ILQLPNLFLTLCQLMGVGIIGPFYLYLHYILSPIESFAARDKRLTNTRWSYTTLPAILLA 689
Query: 190 FIGLIFVHLFLPA--AKSKIMSIL-PGVIFTWISWVVGAVLFTHYI-----VTFST---Y 238
++ + LF P + + I P I+T ++ + + LF+ + F+
Sbjct: 690 YLTPLIGFLFSPDLPQRQSWLFIWQPFPIWTALAMLTLSRLFSDTVNQDKINNFTKDLPV 749
Query: 239 STMYAGLASIMTC 251
+Y GL SI+
Sbjct: 750 LRIYIGLGSIIAA 762
>gi|242800185|ref|XP_002483535.1| EF hand domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716880|gb|EED16301.1| EF hand domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1552
Score = 38.7 bits (89), Expect = 0.92, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 56/141 (39%), Gaps = 15/141 (10%)
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP-- 201
V+L++ +F+A L YV A G+L+ YA F G + + ++P
Sbjct: 277 VSLIVSIVLFIAFILVEIYVAPEPFAPGHLIFDQNLLACYACNFFSFAGFMGILFYIPLY 336
Query: 202 -------AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+A + +LP +IF + + Y + Y L S + ++F
Sbjct: 337 FQAVNGVSASVAGVRLLPQIIFGVSGSLAAGIFMRRYGTYYGITIFGYGLLLS-GSFVLF 395
Query: 255 LYMLGV-----FFILGAELNA 270
L+ + I+GA ++A
Sbjct: 396 LFSGAIADAYQLMIVGAMISA 416
>gi|12699734|gb|AAG37728.1| cannabinoid receptor 1 [Myrmecophaga tridactyla]
Length = 330
Score = 38.7 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 119 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 175
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLA-------LAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + + V +PL + FP + L+ W G ++
Sbjct: 176 VTRPKAVVAFCLMWTXAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 233
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I PG
Sbjct: 234 LLLFIVYAYMYILWKAHSHAVRMIQPGT 261
>gi|602290|gb|AAA57202.1| brain-type cannabinoid receptor [Mus musculus]
gi|1586467|prf||2204198A brain-type cannabinoid receptor
Length = 473
Score = 38.7 bits (89), Expect = 0.95, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 172 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLRAIDR--YISIHRPLAYKRI 228
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 229 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 286
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 287 LLLFIVYAYMYILWKAHSHAVRMIQRGT 314
>gi|326429057|gb|EGD74627.1| hypothetical protein PTSG_05991 [Salpingoeca sp. ATCC 50818]
Length = 1112
Score = 38.7 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 41/157 (26%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
G V + + I+ F+A+ YV FP +G ++ W L + I +
Sbjct: 730 LGVVAFGPIAVAILMVFFIAVAGLARYVFGRFPEIGYRFILAWCIMTVLDPLLILIVDLA 789
Query: 196 VHLFLPAA--------KSKIMS------ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + K LPG+ T F + ++ F++
Sbjct: 790 LERWKYDGVEPVGDAFKLYWHFDHSDDGGLPGIFIT---------AFVYIVIMFASAMAT 840
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y LY+L + LNA+++ Y R
Sbjct: 841 Y------------LYLLRL------HLNAAILDLYRR 859
>gi|255024849|ref|ZP_05296835.1| hypothetical protein LmonocyFSL_17631 [Listeria monocytogenes FSL
J1-208]
Length = 39
Score = 38.7 bits (89), Expect = 0.98, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 2 IIILMLWFYLTGIILMIGGELNATLAIRKKKKE 34
>gi|126310315|ref|XP_001367049.1| PREDICTED: similar to serine/threonine protein kinase TAO1
[Monodelphis domestica]
Length = 473
Score = 38.7 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 172 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 228
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 229 VTRPKAVVAFCVMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSI 286
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI +V++ A + I G
Sbjct: 287 LLLFIVYAYVYILWKAHSHAVRMIQRGT 314
>gi|332023999|gb|EGI64217.1| Transient receptor potential cation channel protein painless
[Acromyrmex echinatior]
Length = 852
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 30/202 (14%), Positives = 61/202 (30%), Gaps = 36/202 (17%)
Query: 87 AVPAKGLFTISALAAAY-------FSSNGVEALRISLNRAYRVVE--------MRSWYIT 131
+ + S L + ++S V L + L ++ V R+W
Sbjct: 503 TNNRSNITSGSTLRIIWNQQNNFLWASTVVMLLLLILREIFQFVSCVRSYLMSSRNWMEI 562
Query: 132 RLISFGYVLL-------ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
LI+F LL +V +++ ++ V + + + L
Sbjct: 563 VLITFTIALLSGAGVQIGAVVILLSAWELVILISQHPRLSTGIEMFRTVSLNFIRFLFPY 622
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPG-VIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L L F LF + PG +F I + G F +
Sbjct: 623 LFLIFAFALAFYTLFKNGDDTNFPD--PGLSLFKTIIMLTG---------EFDANDIPFI 671
Query: 244 G--LASIMTCLVFLYMLGVFFI 263
+ S + ++F++ + +
Sbjct: 672 SHPIWSHIVFMLFVFFIAIVLF 693
>gi|297521106|ref|ZP_06939492.1| conserved inner membrane protein [Escherichia coli OP50]
Length = 135
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
+ A E F + G + I+ + LS+ P ++ GF+ + + D +
Sbjct: 54 LIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQN 113
Query: 70 WP-EVIAKPITDEILQVLAVPA 90
+A + + I +
Sbjct: 114 ISDPTLAATLKNTINTAVQQRT 135
>gi|296824894|ref|XP_002850728.1| peptidase family M28 protein [Arthroderma otae CBS 113480]
gi|238838282|gb|EEQ27944.1| peptidase family M28 protein [Arthroderma otae CBS 113480]
Length = 976
Score = 38.7 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + LIS ++L I+ + + L L A G L+I+ G
Sbjct: 669 EQR--WSINLISSAWILQFLFVAPIVIILLGQLGLFLTSATYQIGADGGSQLVIYVGIAV 726
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIF 216
++L L F+H F + ++ +L G +
Sbjct: 727 LSVLILLPLFPFIHRFTYHIPTFLLFVLIGTLV 759
>gi|90023574|ref|YP_529401.1| H+-transporting two-sector ATPase, gamma subunit [Saccharophagus
degradans 2-40]
gi|89953174|gb|ABD83189.1| acriflavin resistance protein [Saccharophagus degradans 2-40]
Length = 1042
Score = 38.3 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 60/183 (32%), Gaps = 18/183 (9%)
Query: 44 VFGANLAGFLGAHQFVPTVIDVVFGAWPEVI--------AKPITDEILQVLAVPAKGLFT 95
+F L + V TV+ + PE + A+ +D ++ +L +
Sbjct: 293 IFRVGKQSPLDIAKAVDTVLAELDNTLPEGVKYRIDSNDAENFSDRLMLLLENGGVAILI 352
Query: 96 ISALAAAYFSSNGVEALRISLNRAY--RVVEMRSWYITRLISFGYVLLASVTLVIMSFV- 152
+ + A + + + + ++ ++ + IS + + + +V+ V
Sbjct: 353 VLGILAIFLELRLAFWIMMGMCISFVGGIL----FLPFLDISINMISMFAFLVVLGIVVD 408
Query: 153 --FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV-HLFLPAAKSKIMS 209
V Y ++ + L + + T L + FV +F+P
Sbjct: 409 DAIVVGENVHEYRQRGYNDLDAAIKGTQDIAAPVTFTILTTIVAFVPVMFIPGTTGNFWW 468
Query: 210 ILP 212
P
Sbjct: 469 PFP 471
>gi|262367623|gb|ACY64180.1| membrane protein [Yersinia pestis D182038]
Length = 170
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
++ + + A ++ L + + ++ A ++ +++ LP
Sbjct: 1 MALIITLSLTSIAGAAQAAIVNALGLGSIEWLRPAMTLIALSISIAANYLLFLWIFWILP 60
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K K ++L G + I + V + T + ++ S A S++ + F Y
Sbjct: 61 RNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SPSGAAFGSVIGLMAFFYFFARL 119
Query: 262 FILGA 266
+ A
Sbjct: 120 TLFCA 124
>gi|47086397|ref|NP_997985.1| cannabinoid receptor 1 [Danio rerio]
gi|31322057|gb|AAN46748.1| cannabinoid receptor-like protein cb1-zf [Danio rerio]
gi|56316162|emb|CAI29398.1| cannabinoid receptor 1 [Danio rerio]
Length = 475
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 12/142 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R V R R+
Sbjct: 179 VYSFLDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YVSIHRPLSYRRI 235
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + +S + +PL + FP + L+ W G ++
Sbjct: 236 VTRTKAVIAFCMMWAISIIIAVLPLLGWNCKRLNSVCSDIFPLIDENYLMFWIG--VTSV 293
Query: 187 LALFIGLIFVHLFLPAAKSKIM 208
L LFI ++++ A +
Sbjct: 294 LVLFIIYAYMYILWKAHHHAVR 315
>gi|297691491|ref|XP_002823118.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
isoform 2 [Pongo abelii]
Length = 882
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W + R +++ Y+L +V L++ P+ L Y + L+ IW+ R AT+L
Sbjct: 309 WSMMRFLTYSYLLAFNVWLLLA-------PVTLCY--DWQVGSIPLVETIWDMRNLATIL 359
Query: 188 -ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
A+ I L+ +H + + +L G++F ++ + LF
Sbjct: 360 LAVVIALLSLHCLAAFKRLEHKEVLVGLLFLVFPFIPASNLF 401
>gi|62910923|gb|AAY21179.1| cannabinoid receptor type-I [Homo sapiens]
Length = 472
Score = 38.3 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + P + L++W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDILPHIDETYLMLWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGA 313
>gi|313891308|ref|ZP_07824926.1| stage III sporulation protein E [Streptococcus pseudoporcinus SPIN
20026]
gi|313120375|gb|EFR43496.1| stage III sporulation protein E [Streptococcus pseudoporcinus SPIN
20026]
Length = 801
Score = 38.3 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 30/164 (18%)
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFV---------FVAIPLALAYVRKFFPALGN 172
+E + + SF L+ + + F+ LA ++ F L
Sbjct: 20 EIEKQRAIKRMIFSFLLALVLIFAAIRLGVFGITAYNVIRFMVGSLAYLFILAVFCYLFF 79
Query: 173 LLLIIWNGRIYATMLALFIGLIF---VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ + A L LF+GL+ +LF + + K + FT+ + ++ L
Sbjct: 80 FKWLRKQEGLIAGFLILFMGLLIEWHAYLFT-SPELKNHEV-----FTYTTRLITQDLLG 133
Query: 230 HYIVTFSTYSTMYAGLASIM---TCLVF-----LYMLGVFFILG 265
+ F L +++ +F ++ + +LG
Sbjct: 134 FKVQNFLGG----GMLGALIYKPVSFLFSNIGSFFIGALIILLG 173
>gi|307326457|ref|ZP_07605652.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
gi|306887865|gb|EFN18856.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
Length = 278
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 37/256 (14%), Positives = 78/256 (30%), Gaps = 29/256 (11%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+E V + A+ ++ A L+ P ++ A + D +
Sbjct: 22 RFLERLVAVNVLEAATRLAAQAFLTALPLLMAVAAFVP----DTLQNLLADSLRSVV--G 75
Query: 74 IAKPITDEILQVLAVPAKG---LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + DE+ + P + L ++ AL+ R + + R+
Sbjct: 76 VRGDVLDEVRRTFTGPGTAKSPSGAVGLLVTLVSATAFSRALQAVCERCWGLP--RAAVR 133
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ LL ++ + V PL + L LL + L L
Sbjct: 134 VAAWRWLLWLLVW-----LTVLLVQAPLRRGFGTGIVSGLVLSLLSAVLLWWWTQHLLL- 187
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASIM 249
+ + +LPG + V+ L + V + + L +
Sbjct: 188 -----------SGRVTWTYLLPGAVLAGAGTVLLGYLSRLLMPVAMARSLADFGPLGPVF 236
Query: 250 TCLVFLYMLGVFFILG 265
T L +L ++ + + G
Sbjct: 237 TLLTWLIVVFLIAVAG 252
>gi|327261519|ref|XP_003215577.1| PREDICTED: cannabinoid receptor 1-like [Anolis carolinensis]
Length = 442
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 141 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLSYKRI 197
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + +S V +PL + FP + L+ W G T+
Sbjct: 198 VTRSKAVVAFCVMWTISIVIAVLPLLGWNCKMLNSVCSDIFPLIDENYLLFWIG--VTTV 255
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 256 LLLFIVYAYMYILWKAHSHAVRMIQRGT 283
>gi|302661702|ref|XP_003022515.1| hypothetical protein TRV_03357 [Trichophyton verrucosum HKI 0517]
gi|291186465|gb|EFE41897.1| hypothetical protein TRV_03357 [Trichophyton verrucosum HKI 0517]
Length = 962
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L+S ++L + I+ + + L L A G L+I+ G ++L
Sbjct: 658 WSIYLMSSAWILQFLLVAPIVIILLGQLGLFLTSATYQIGADGGSQLVIYIGIAVLSVLI 717
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIF 216
L F+H F + ++ IL G +
Sbjct: 718 LLPLFPFIHRFTYHIPTFLLFILIGTLV 745
>gi|149638870|ref|XP_001510779.1| PREDICTED: similar to CB1 cannabinoid receptor [Ornithorhynchus
anatinus]
Length = 473
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 172 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 228
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 229 VTRPKAVVAFCVMWTIAIVIAVLPLLGWNCKKLESVCSDIFPLIDETYLMFWIG--VTSV 286
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 287 LLLFIVYAYMYILWKAHSHAVRMIQRGT 314
>gi|326437017|gb|EGD82587.1| hypothetical protein PTSG_03240 [Salpingoeca sp. ATCC 50818]
Length = 1340
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 50/185 (27%)
Query: 112 LRISLNRAYRVVEMRS-------WYITRLISFGYVLLASVTLVIMSFVFVAIPLAL---- 160
+R + + Y + R + R +S+G + SVT V ++F + + +
Sbjct: 632 IRDAFDLGYGIQVGRGHSCSRDQIVVRRAVSYGMTVSTSVTAVAVTFSLLHVLVVYRKRM 691
Query: 161 --------AYVRKFFP-----------ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
++ K P + I + +L L IG I + LP
Sbjct: 692 FLLFRGRPDFITKHVPMDKSIGSTLKFGGTQVASAIGGWVLGTCVLTLLIGFIAISTVLP 751
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV--FLYMLG 259
P W F Y+ L + L+ +L +
Sbjct: 752 FMNIYGDWFWP-------WWF-----------QFVIYNHETGALGFPVILLINYWLLLFC 793
Query: 260 VFFIL 264
V F+
Sbjct: 794 VRFVF 798
>gi|302508393|ref|XP_003016157.1| hypothetical protein ARB_05554 [Arthroderma benhamiae CBS 112371]
gi|291179726|gb|EFE35512.1| hypothetical protein ARB_05554 [Arthroderma benhamiae CBS 112371]
Length = 962
Score = 38.3 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L+S ++L + I+ + + L L A G L+I+ G ++L
Sbjct: 658 WSIYLMSSAWILQFLLVAPIVIILLGQLGLFLTSATYQIGADGGSQLVIYIGIAVLSVLI 717
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIF 216
L F+H F + ++ IL G +
Sbjct: 718 LLPLFPFIHRFTYHIPTFLLFILIGTLV 745
>gi|260599840|ref|YP_003212411.1| phosphoethanolamine transferase [Cronobacter turicensis z3032]
gi|260219017|emb|CBA34372.1| UPF0141 inner membrane protein yhjW [Cronobacter turicensis z3032]
Length = 559
Score = 37.9 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 47/126 (37%), Gaps = 15/126 (11%)
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
L ++ V++ + A + + F L + + ++A + F+ L
Sbjct: 12 LSVLLAVYIGLFFNCAVLYRRFDGYAQNLSWVNAVSMVVELVATVLVTFFLFRVLSLLGR 71
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT--------CLVFLYM 257
++ +L VV + ++Y+ TF Y +AS+MT + + ++
Sbjct: 72 RVWRVL------ASLVVVFSAAASYYM-TFMNVVIGYGIIASVMTTDIDLSKEVVGWEFI 124
Query: 258 LGVFFI 263
+ +
Sbjct: 125 SWMVLV 130
>gi|327307400|ref|XP_003238391.1| peptidase M28 [Trichophyton rubrum CBS 118892]
gi|326458647|gb|EGD84100.1| peptidase M28 [Trichophyton rubrum CBS 118892]
Length = 962
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L+S ++L + I+ + + L L A G L+I+ G ++L
Sbjct: 658 WSIYLMSSAWILQFLLVAPIVIILLGQLGLFLTSATYQIGADGGSQLVIYIGIAVLSVLI 717
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIF 216
L F+H F + ++ IL G +
Sbjct: 718 LLPLFPFIHRFTYHIPTFLLFILIGTLV 745
>gi|156254100|gb|ABC75871.2| cannabinoid 1 receptor [Cavia porcellus]
Length = 472
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGT 313
>gi|47224365|emb|CAG09211.1| unnamed protein product [Tetraodon nigroviridis]
Length = 468
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 12/142 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 170 VYSFLDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYRRI 226
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + +S V +PL + FP + L+ W G ++
Sbjct: 227 VTRTKAVIAFCMMWTISIVIAVLPLLGWNCKRLNSVCSDIFPLIDENYLMFWIG--VTSV 284
Query: 187 LALFIGLIFVHLFLPAAKSKIM 208
L LFI ++++ A +
Sbjct: 285 LVLFIIYAYIYILWKAHHHAVR 306
>gi|326478484|gb|EGE02494.1| peptidase M28 family protein [Trichophyton equinum CBS 127.97]
Length = 962
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L+S ++L + I+ + + L L A G L+I+ G ++L
Sbjct: 658 WSIYLMSSAWILQFLLVAPIVIILLGQLGLFLTSATYQIGADGGSQLVIYIGIAVLSVLI 717
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIF 216
L F+H F + ++ IL G +
Sbjct: 718 LLPLFPFIHRFTYHIPTFLLFILIGTLV 745
>gi|212697062|ref|ZP_03305190.1| hypothetical protein ANHYDRO_01627 [Anaerococcus hydrogenalis DSM
7454]
gi|212675837|gb|EEB35444.1| hypothetical protein ANHYDRO_01627 [Anaerococcus hydrogenalis DSM
7454]
Length = 357
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
G+++ + T+L+L + + + +F P ++ I S+ GV + + ++ + +
Sbjct: 37 WGSIIAGAVSFAAVFTVLSLIVAALGLGIFSPNNENPISSMGIGVGISTVIILIISFGVS 96
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+I +S + L M+ + L + + G
Sbjct: 97 GFIS--GAFSKGQSLLHGFMS-----WALSIILLFG 125
>gi|258596971|ref|XP_001347319.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254922375|gb|AAN35232.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 1272
Score = 37.9 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 49/160 (30%), Gaps = 25/160 (15%)
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV---AIPLALAYVRKFFPAL 170
++N+ + ++ + L + ++ +VI +FV L + +
Sbjct: 34 TAVNKIHLTFDVEYLWALCLGTLLFIYSLISFVVIRTFVLSKIDIGKYVLEILFFISIIV 93
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFV-HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
L +I + A M LF + + S+ G++
Sbjct: 94 TCTLSLIIDSFKIANMQLLFFSFALTGYAYYNLITLFFFSVAAGILI------------- 140
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF-ILGAEL 268
Y+ + + L F+ +L I+G +
Sbjct: 141 -------QYNLNIGSFGADIDALFFIDLLSYILQIIGGNI 173
>gi|213586188|ref|ZP_03368014.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 88
Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 25/70 (35%)
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
+L +I N +L +I ++ +P + L G + + G F
Sbjct: 17 WASDLNTVIDNVLRILPLLLSWISFWLLYSIVPTTRVPNRDALVGAFVAALLFEAGKKGF 76
Query: 229 THYIVTFSTY 238
YI F +Y
Sbjct: 77 ALYITMFPSY 86
>gi|256384157|gb|ACU78727.1| putative membrane protein [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256384989|gb|ACU79558.1| putative membrane protein [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455879|gb|ADH22114.1| putative membrane protein [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 519
Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 73/200 (36%), Gaps = 13/200 (6%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEMRSWYI 130
I + +++ + + L TI + + + A+ I + Y++ + +
Sbjct: 306 SGIISGVLLQVIDINSSNITALITIGSFIMLWAIFAIIFHAIYIFFKKEYKINKH---IL 362
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ Y LL V + + + V I F L + T L ++
Sbjct: 363 VKPAITYYSLLLLVFMTLTAGC-VGIAQVGNIAEPFTAPLMTKWFGALAYLVLTTCLVMY 421
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST------YSTMYAG 244
+ V + + + I+ ++ I W + +++ F+ YS + +G
Sbjct: 422 VLATLVDNYRSGKQLSVKLIINNIVLPAIIWTITTGA--NFVALFAKSQEVMDYSNLISG 479
Query: 245 LASIMTCLVFLYMLGVFFIL 264
+ +++ L ++Y+ F++
Sbjct: 480 INTLVMVLFWIYLFTAQFLI 499
>gi|149722786|ref|XP_001503797.1| PREDICTED: cannabinoid receptor 1 (brain) isoform 1 [Equus
caballus]
Length = 472
Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGT 313
>gi|326470922|gb|EGD94931.1| peptidase M28 [Trichophyton tonsurans CBS 112818]
Length = 962
Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L+S ++L + I+ + + L L A G L+I+ G ++L
Sbjct: 658 WSIYLMSSAWILQFLLVAPIVIILLGQLGLFLTSATYQIGADGGSQLVIYIGIAVLSVLI 717
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIF 216
L F+H F + ++ IL G +
Sbjct: 718 LLPLFPFIHRFTYHIPTFLLFILIGTLV 745
>gi|291396596|ref|XP_002714618.1| PREDICTED: cannabinoid receptor 1-like isoform 1 [Oryctolagus
cuniculus]
Length = 472
Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGT 313
>gi|251792101|ref|YP_003006821.1| permease [Aggregatibacter aphrophilus NJ8700]
gi|247533488|gb|ACS96734.1| conserved permease [Aggregatibacter aphrophilus NJ8700]
Length = 355
Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 43/127 (33%), Gaps = 14/127 (11%)
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L +L S + + ++++ N L W + + + L +F
Sbjct: 233 LGVASLRPTSLSISGLSSYITFLKETGQDSKNFELTYWRKLFQPISVGVMMMLALSFIFG 292
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYAG---LASIMTCLVFL 255
P + S+ G + F Y+V F +S +Y + ++M ++FL
Sbjct: 293 P-----LRSVTAGARI----LIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSMLFL 343
Query: 256 YMLGVFF 262
+
Sbjct: 344 AITWWLL 350
>gi|154508526|ref|ZP_02044168.1| hypothetical protein ACTODO_01027 [Actinomyces odontolyticus ATCC
17982]
gi|153798160|gb|EDN80580.1| hypothetical protein ACTODO_01027 [Actinomyces odontolyticus ATCC
17982]
Length = 522
Score = 37.9 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%)
Query: 168 PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
P + L + L + + +L K K + GV+ + + A L
Sbjct: 252 PWIAQFLPSLLVILREGMEAILVVAAVLAYLAKAGHKKKAPIVWGGVVLAFGLSIGLAFL 311
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
F++ + G A++ ++ +++
Sbjct: 312 FSYVTSLAGANQELLEGFAALFAVVMLIWVSNWMI 346
>gi|301780298|ref|XP_002925559.1| PREDICTED: cannabinoid receptor 1-like [Ailuropoda melanoleuca]
gi|281343260|gb|EFB18844.1| hypothetical protein PANDA_015085 [Ailuropoda melanoleuca]
Length = 472
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLRSVCSDIFPLIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGT 313
>gi|113954695|ref|YP_731660.1| peroxisomal fatty acyl CoA ABC transporter ATP-binding protein
[Synechococcus sp. CC9311]
gi|113882046|gb|ABI47004.1| peroxisomal fatty acyl CoA ABC transporter (P-FAT) family,
ATP-binding protein [Synechococcus sp. CC9311]
Length = 681
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 33/99 (33%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I L+ + + V V+ + + K+ + + IW+ +A
Sbjct: 60 FIWLLVCLLFCVGGLVLAVLTALIRSLDRFQPDLTEKYLSGVSGTIATIWSSWWGVAFVA 119
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
LF+ + + + G++ T + ++
Sbjct: 120 LFLVGLASFVAFRQQLRHRRWLNWGLLATIVFMLLAVNG 158
>gi|6978673|ref|NP_036916.1| cannabinoid receptor 1 [Rattus norvegicus]
gi|115563|sp|P20272|CNR1_RAT RecName: Full=Cannabinoid receptor 1; Short=CB-R; Short=CB1;
AltName: Full=Brain-type cannabinoid receptor
gi|57249|emb|CAA39332.1| CB1 cannabinoid receptor [Rattus norvegicus]
gi|1304524|gb|AAA99067.1| neuronal cannabinoid receptor [Rattus norvegicus]
gi|149045589|gb|EDL98589.1| cannabinoid receptor 1 (brain) [Rattus norvegicus]
gi|227075|prf||1613453A cannabinoid receptor
Length = 473
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 172 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 228
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 229 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 286
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 287 LLLFIVYAYMYILWKAHSHAVRMIQRGT 314
>gi|6724315|ref|NP_031752.1| cannabinoid receptor 1 [Mus musculus]
gi|1345697|sp|P47746|CNR1_MOUSE RecName: Full=Cannabinoid receptor 1; Short=CB-R; Short=CB1;
AltName: Full=Brain-type cannabinoid receptor
gi|4960173|gb|AAD34624.1|AF153345_1 CB1 cannabinoid receptor [Mus musculus]
gi|733425|gb|AAA64413.1| CB1 cannabinoid receptor [Mus musculus]
gi|1209707|gb|AAA91176.1| neuronal cannabinoid receptor [Mus musculus]
gi|4803701|emb|CAB42647.1| cannabinoid CB1 receptor [Mus musculus]
gi|46398243|gb|AAS91800.1| striatal cannabinoid receptor type 1 protein [Mus musculus]
gi|46398245|gb|AAS91801.1| striatal cannabinoid receptor type 1 protein [Mus musculus]
gi|47683043|gb|AAH70447.1| Cannabinoid receptor 1 (brain) [Mus musculus]
gi|50926048|gb|AAH79564.1| Cannabinoid receptor 1 (brain) [Mus musculus]
gi|74228277|dbj|BAE24003.1| unnamed protein product [Mus musculus]
gi|123297203|emb|CAM27898.1| cannabinoid receptor 1 (brain) [Mus musculus]
gi|148673535|gb|EDL05482.1| mCG12569 [Mus musculus]
Length = 473
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 172 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 228
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 229 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 286
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 287 LLLFIVYAYMYILWKAHSHAVRMIQRGT 314
>gi|311244168|ref|XP_003121340.1| PREDICTED: cannabinoid receptor 1-like [Sus scrofa]
Length = 447
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 146 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 202
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 203 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 260
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 261 LLLFIVYAYMYILWKAHSHAVRMIQRGT 288
>gi|300173492|ref|YP_003772658.1| cell division protein [Leuconostoc gasicomitatum LMG 18811]
gi|299887871|emb|CBL91839.1| Cell division protein [Leuconostoc gasicomitatum LMG 18811]
Length = 797
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 50/150 (33%), Gaps = 30/150 (20%)
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
I V V + + A ++ + G +Y L + ++ ++ F+ KI
Sbjct: 31 IAILVTVLFGILGIFKLGLLGAYTANVIRFFFGNLYLGFLVP-LTVVLIYYFVFKKLPKI 89
Query: 208 M-SILPGVIFTWISWVVGAVL--FTHYIVTFSTYSTMY-------------------AGL 245
G I +IS + + L FT+ + + Y+ +
Sbjct: 90 PGHFWIGAIMVFISLLTMSSLLFFTYSLKNGNGYTQEVSHLIGQDFVNKASNTPVGGGSV 149
Query: 246 ASIMTCLVF-------LYMLGVFFILGAEL 268
+I+ L+F +++ + + +
Sbjct: 150 GAIIYQLLFTLMSNIGTWIVSIILLFAGIV 179
>gi|57095130|ref|XP_539034.1| PREDICTED: similar to Cannabinoid receptor 1 (CB1) (CB-R) (CANN6)
isoform 1 [Canis familiaris]
Length = 472
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGT 313
>gi|297478614|ref|XP_002690242.1| PREDICTED: cannabinoid receptor 1-like isoform 1 [Bos taurus]
gi|296484065|gb|DAA26180.1| cannabinoid receptor 1-like isoform 1 [Bos taurus]
Length = 472
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGT 313
>gi|330900370|gb|EGH31789.1| quinoprotein [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 791
Score = 37.9 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 10/131 (7%)
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ + + S+ L+ M VA + AY L L+ + T+ A+ +
Sbjct: 5 VTGIVIAILSLILLFMGAQLVAAGGSPAYSVIALGLLATATLVFLKRKSALTLYAVMMWA 64
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWIS-WVVGAVLF-THYIVTFSTYSTMY-----AGLA 246
I + + A K I G +F I W+ + Y ST + L
Sbjct: 65 ILIWIIYEAGLDKWQWIPRGDLFALIGLWLAMPWVVRPLYQARSSTDKRRFHPLLGGTLG 124
Query: 247 S---IMTCLVF 254
+ I+ L+F
Sbjct: 125 AMLLIVIALMF 135
>gi|53712889|ref|YP_098881.1| putative ABC transporter permease [Bacteroides fragilis YCH46]
gi|253563127|ref|ZP_04840584.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|52215754|dbj|BAD48347.1| putative ABC transporter permease [Bacteroides fragilis YCH46]
gi|251946903|gb|EES87185.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 806
Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 111 ALRISLNRAYRVVEMR--SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ S+ RA V R + +L+S + LV + I L L Y +
Sbjct: 309 TVARSMERAKEVGVRRVIGAFRKQLVSQFLFEALVMNLVALVLAVGLIELILPYFNQLVS 368
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + G + +L +F+G IF+ + PA
Sbjct: 369 RTVTFSVWL-TGYWWLLLLIVFVGGIFLSGYYPA 401
>gi|301162594|emb|CBW22141.1| putative FtsX-related transmembrane transport protein [Bacteroides
fragilis 638R]
Length = 806
Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 111 ALRISLNRAYRVVEMR--SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ S+ RA V R + +L+S + LV + I L L Y +
Sbjct: 309 TVARSMERAKEVGVRRVIGAFRKQLVSQFLFEALVMNLVALVLAVGLIELILPYFNQLVS 368
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + G + +L +F+G IF+ + PA
Sbjct: 369 RTVTFSVWL-TGYWWLLLLIVFVGGIFLSGYYPA 401
>gi|290977638|ref|XP_002671544.1| predicted protein [Naegleria gruberi]
gi|284085114|gb|EFC38800.1| predicted protein [Naegleria gruberi]
Length = 883
Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 30/204 (14%), Positives = 72/204 (35%), Gaps = 13/204 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
C + Y + + + ++ ++ ++ F++F NL + + +
Sbjct: 414 CFTYYYTYSQLYLSTTDSTSPIIANDAIYITIASVGFLIFMTNLFAYFLGFKIMTKKRLF 473
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR------- 118
+ + P + + V + + + A + + + + +S++R
Sbjct: 474 LPLSAPPFLFTLCIFFVYGVKSNIPTESYWVQMALAFFPAPLFIASYLVSVSRFTYLKNI 533
Query: 119 ----AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
Y +R + + S G + A++ L I F+ IP+ + V F +
Sbjct: 534 EKCTKYCCKSLR--FHRCMTSRGISIFAALFLTIFLFIVCGIPILIVLVALVFSFVNFPT 591
Query: 175 LIIWNGRIYATMLALFIGLIFVHL 198
I+ T+L LFI +F
Sbjct: 592 EIVILMIAIQTILLLFIATLFFIF 615
>gi|149235602|ref|XP_001523679.1| metal resistance protein YCF1 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452658|gb|EDK46914.1| metal resistance protein YCF1 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1336
Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 48/137 (35%), Gaps = 13/137 (9%)
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
+ + + V + +++ GN + + ++ ++ L I + V F
Sbjct: 78 FTGLLFSIASLLMIVVGTYQVVHLKNKKITSGNRITWSFYFKLSLVLIQLAILVGLVFTF 137
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
AK G+IFT + V + + I + + L+F ++
Sbjct: 138 TGPAK--------GIIFTSLVLNVASTIVALAIHYIEEFKSTIPN-----GVLLFYWLFE 184
Query: 260 VFFILGAELNASMIIYY 276
F LG ++N + +
Sbjct: 185 TIFFLGKDINLHLRSQF 201
>gi|60681107|ref|YP_211251.1| putative FtsX-related transmembrane transport protein [Bacteroides
fragilis NCTC 9343]
gi|60492541|emb|CAH07312.1| putative FtsX-related transmembrane transport protein [Bacteroides
fragilis NCTC 9343]
Length = 806
Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 111 ALRISLNRAYRVVEMR--SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ S+ RA V R + +L+S + LV + I L L Y +
Sbjct: 309 TVARSMERAKEVGVRRVIGAFRKQLVSQFLFEALVMNLVALVLAVGLIELILPYFNQLVS 368
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + G + +L +F+G IF+ + PA
Sbjct: 369 RTVTFSVWL-TGYWWLLLLIVFVGGIFLSGYYPA 401
>gi|300785969|ref|YP_003766260.1| ribonuclease BN [Amycolatopsis mediterranei U32]
gi|299795483|gb|ADJ45858.1| ribonuclease BN [Amycolatopsis mediterranei U32]
Length = 312
Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 5/183 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ DA D A+ ++ A+L+V P + A FLG+ FV + A
Sbjct: 34 VLRDAGRELRGRDLSLWAAGVTFFAVLAVVPLALVALRGAAFLGSPAFVRDGVSRWADAL 93
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW-Y 129
P + L+ LA A G + L ++ E L L + +
Sbjct: 94 PPGHG---SGPALEALATAALGTPWTALLVTLLPATFYGEGLLRGLVQVAGQPAGALVGW 150
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL+ F VL+ S TL I L + G L + I A + A+
Sbjct: 151 RGRLM-FVPVLVLSPTLAIAPLATADPVAGLYTRGGWATFWGITLSFHIDWLIIAAVTAI 209
Query: 190 FIG 192
Sbjct: 210 VFA 212
>gi|294932925|ref|XP_002780510.1| hypothetical protein Pmar_PMAR001102 [Perkinsus marinus ATCC 50983]
gi|239890444|gb|EER12305.1| hypothetical protein Pmar_PMAR001102 [Perkinsus marinus ATCC 50983]
Length = 600
Score = 37.9 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 14/132 (10%), Positives = 36/132 (27%), Gaps = 4/132 (3%)
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ RL G+ L + ++ V + L + L+ + +
Sbjct: 161 VARLFKVGFERLTILHALLGINALVFGIMHLIMIAPRVTVQCALIFGGNEAVASGVLFLI 220
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F++ ++P V F + + V F+ + Y +
Sbjct: 221 TFICAFIYKYIPHGYRVFRWSHWLVYFATVLLLFHTVQHELIQSEFTHSAGPYVTSGVLF 280
Query: 250 TCLVFLYMLGVF 261
++ +
Sbjct: 281 VV----WIASII 288
>gi|265762987|ref|ZP_06091555.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263255595|gb|EEZ26941.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 806
Score = 37.9 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Query: 111 ALRISLNRAYRVVEMR--SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ S+ RA V R + +L+S + LV + I L L Y +
Sbjct: 309 TVARSMERAKEVGVRRVIGAFRKQLVSQFLFEALVMNLVALVLAVGLIELILPYFNQLVS 368
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + G + +L +F+G IF+ + PA
Sbjct: 369 RTVTFSVWL-TGYWWLLLLIVFVGGIFLSGYYPA 401
>gi|242280072|ref|YP_002992201.1| hypothetical protein Desal_2607 [Desulfovibrio salexigens DSM 2638]
gi|242122966|gb|ACS80662.1| protein of unknown function DUF1385 [Desulfovibrio salexigens DSM
2638]
Length = 338
Score = 37.9 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Query: 104 FSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
NGV+AL S +A E L +F VL + L +FV +P +
Sbjct: 93 TMVNGVKALNYSATQALDEEED-----GELTTFHLVLTMVIALGAALGLFVVLPHFFSVA 147
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
K++ G++ + ++ + +FIG I F+P K
Sbjct: 148 MKWWGVSGDVDSLSFHIWDGFFKMLMFIGYIVSISFVPDIKRVF 191
>gi|296117695|ref|ZP_06836279.1| DNA translocase FtsK [Corynebacterium ammoniagenes DSM 20306]
gi|295969426|gb|EFG82667.1| DNA translocase FtsK [Corynebacterium ammoniagenes DSM 20306]
Length = 976
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 39/131 (29%), Gaps = 7/131 (5%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
G L + LVI + V +A + I I T L + L
Sbjct: 121 IGAALAQGIHLVIGAGALVLPVALIALALVLMLDISTPERGIPTRVIIGTTLIIVAMLGL 180
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWV--VGAVLFTHYIVT-FSTYSTMYAGL--ASIMT 250
+HLF + I G +W + A F+ Y+ +Y L I
Sbjct: 181 IHLFAGNPGAWADRIAAGG--AVGAWTGGLLAAGFSSYVAVPLLVLVIIYGALRVTGITV 238
Query: 251 CLVFLYMLGVF 261
F ++
Sbjct: 239 REAFDFISARI 249
>gi|254392742|ref|ZP_05007915.1| ABC transporter ATP-binding protein [Streptomyces clavuligerus ATCC
27064]
gi|294811855|ref|ZP_06770498.1| ABC transporter ATP-binding protein [Streptomyces clavuligerus ATCC
27064]
gi|197706402|gb|EDY52214.1| ABC transporter ATP-binding protein [Streptomyces clavuligerus ATCC
27064]
gi|294324454|gb|EFG06097.1| ABC transporter ATP-binding protein [Streptomyces clavuligerus ATCC
27064]
Length = 848
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 68/193 (35%), Gaps = 18/193 (9%)
Query: 45 FGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF 104
A+ GFL +P V+ VV P D+ A + I A+ +
Sbjct: 583 VIASDRGFLALMLILPAVLGVVSAVVPAAYGLTAPDDGKDEFNSDAGTILLILAIGMCFS 642
Query: 105 -SSNGVEALRISLNRAYRVVE----MRSWYITRLISFGYVLLASVTL-VIMSFVFVAIPL 158
++N V L Y RS L+S VL A L ++ +P
Sbjct: 643 GAANSVRELIK-ERVIYERERATGLSRS---AYLLSKVIVLGAITALQGVVLCAIGLLPR 698
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
L P L ++I I + ++ GL+ L A K+ M +L V+F
Sbjct: 699 ELPAEGLLLPPAVELGVVI----IALGLTSMMAGLVISSLVRTAEKT--MPLL--VMFAI 750
Query: 219 ISWVVGAVLFTHY 231
+ V VLF Y
Sbjct: 751 VQIVFTGVLFKVY 763
>gi|296198746|ref|XP_002746849.1| PREDICTED: cannabinoid receptor 1 isoform 1 [Callithrix jacchus]
gi|296198748|ref|XP_002746850.1| PREDICTED: cannabinoid receptor 1 isoform 2 [Callithrix jacchus]
Length = 472
Score = 37.5 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGT 313
>gi|322706740|gb|EFY98320.1| DUF221 domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 1226
Score = 37.5 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 60/185 (32%), Gaps = 12/185 (6%)
Query: 34 SALLSVFPFIV-FGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG 92
++S+ F + + V V++++ P + +LQ L+ +
Sbjct: 798 FLVVSIASFFFRSLGEIVNSVKELSSVDAVLNLLAQNLPSAAIYFFSYMVLQALSTSSGT 857
Query: 93 LFTISALAAAYFSSNGVEALRI---SLNRAYRVVEMRSWYITRL----ISFGYVLLASVT 145
L + L Y + ++ + N + V S++ I Y ++A +
Sbjct: 858 LLQVMTLFMWYIMAPMRDSTARQKWARNTSLNQVNWGSFFPVYTNFACIGLIYCIIAPLI 917
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR----IYATMLALFIGLIFVHLFLP 201
+ F + LA Y + G + R + + + + L + +
Sbjct: 918 SIFAVITFGLLWLAQRYAMLYVNRSGTDTGGVLYPRAINQTFTGIYFMELCLAGLFFIVT 977
Query: 202 AAKSK 206
K +
Sbjct: 978 DEKRR 982
>gi|326440407|ref|ZP_08215141.1| ABC transporter ATP-binding subunit [Streptomyces clavuligerus ATCC
27064]
Length = 844
Score = 37.5 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 68/193 (35%), Gaps = 18/193 (9%)
Query: 45 FGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF 104
A+ GFL +P V+ VV P D+ A + I A+ +
Sbjct: 579 VIASDRGFLALMLILPAVLGVVSAVVPAAYGLTAPDDGKDEFNSDAGTILLILAIGMCFS 638
Query: 105 -SSNGVEALRISLNRAYRVVE----MRSWYITRLISFGYVLLASVTL-VIMSFVFVAIPL 158
++N V L Y RS L+S VL A L ++ +P
Sbjct: 639 GAANSVRELIK-ERVIYERERATGLSRS---AYLLSKVIVLGAITALQGVVLCAIGLLPR 694
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
L P L ++I I + ++ GL+ L A K+ M +L V+F
Sbjct: 695 ELPAEGLLLPPAVELGVVI----IALGLTSMMAGLVISSLVRTAEKT--MPLL--VMFAI 746
Query: 219 ISWVVGAVLFTHY 231
+ V VLF Y
Sbjct: 747 VQIVFTGVLFKVY 759
>gi|326433331|gb|EGD78901.1| ATP-binding cassette protein [Salpingoeca sp. ATCC 50818]
Length = 1914
Score = 37.5 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 2/129 (1%)
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + +VL+ S + S V + +++ +G I W +
Sbjct: 285 GFIYALRDTLPFVLVISFLFTVTSLVRQIVQEKEKRLKEAMTMMGLDPKIHWVAWFIRAI 344
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFT-WISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ LFI ++ + L A K S GV+F + + + + F + TF + ++ A
Sbjct: 345 VLLFISIVLMILIFEAGKFTQYSET-GVVFIFLLLFSLSTICFCFLVSTFFSKASTGAAA 403
Query: 246 ASIMTCLVF 254
A ++ + F
Sbjct: 404 AGLLFFIAF 412
>gi|292654902|ref|YP_003534799.1| hypothetical protein HVO_0739 [Haloferax volcanii DS2]
gi|291370238|gb|ADE02465.1| conserved hypothetical protein [Haloferax volcanii DS2]
Length = 329
Score = 37.5 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 9/117 (7%)
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
SL+ AY R R +S G+ L++++ + VA
Sbjct: 1 MTSLSEAYHG--GRGGPSLRRLSLGFGGFLLGVLLVVAGIVVATTDVYTSGGATLGEARE 58
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
L I+ + A L + L PA++ + L G + + + +
Sbjct: 59 LGGILGGIGVPAVFLGVLAVL-------PASRRTRAASLIGASIAVLGVALFSHAYP 108
>gi|73973456|ref|XP_867919.1| PREDICTED: similar to Cannabinoid receptor 1 (CB1) (CB-R) (CANN6)
isoform 3 [Canis familiaris]
Length = 447
Score = 37.5 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 146 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 202
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 203 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 260
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 261 LLLFIVYAYMYILWKAHSHAVRMIQRGT 288
>gi|301626228|ref|XP_002942298.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Xenopus (Silurana) tropicalis]
Length = 1127
Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +TR +++ Y+L + L++ P+ L Y + L+ +W+ R AT+
Sbjct: 591 PYPLTRFLTYLYLLAFNSWLLLA-------PITLCY--DWQVGSIPLINSLWDVRNLATL 641
Query: 187 LAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L + +G + +H ++ +L G++F ++ + LF
Sbjct: 642 LFVGIVGSLALHCLAFLKRAPRREVLVGLLFLVFPFIPASNLF 684
>gi|158288858|ref|XP_310685.4| AGAP000413-PA [Anopheles gambiae str. PEST]
gi|157018773|gb|EAA06511.4| AGAP000413-PA [Anopheles gambiae str. PEST]
Length = 1115
Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 14/134 (10%)
Query: 139 VLLASV--TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+LL +V + ++ F AI L +V F + + + + F+
Sbjct: 529 ILLFAVPGSWFLLMFFAGAIGLTGPFVTMIFSMITGDMFT-FGIIYMIVLFGFSQAFYFL 587
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA--SIMTCLVF 254
+ P A+ G F + Y T Y LA + ++F
Sbjct: 588 YKGHPNAEDSPF----GSYFGT-WMALFQTTLGDY-DYADLNLTTYPNLAKTVFVIFMIF 641
Query: 255 ---LYMLGVFFILG 265
L + + ++G
Sbjct: 642 VPILLLNMLIAMMG 655
>gi|78355623|ref|YP_387072.1| putative transmembrane signal peptide protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|78218028|gb|ABB37377.1| conserved hypothetical transmembrane signal peptide protein
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 652
Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 60/157 (38%), Gaps = 34/157 (21%)
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
S+ +AL+ S+ Y E+R +L+S+ + S V A ++
Sbjct: 378 SSAADALQRSMKERYDTPEIR---RNNTSKLLLCVLSSIAALAGSVPLVFAGDAGGFMAG 434
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
ML L GL+ P +PG++F+ I
Sbjct: 435 AASG----------------MLLLMAGLV------PYKILSRRFSIPGILFSLI------ 466
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVF-LYMLGVF 261
F+ ++ F++++ +A + M +++ +++L +F
Sbjct: 467 -FFSFALIFFASFNR-HAEANTGMVIVLWNVFLLWLF 501
>gi|38683844|ref|NP_057167.2| cannabinoid receptor 1 isoform a [Homo sapiens]
gi|61316397|ref|NP_001013035.1| cannabinoid receptor 1 [Pan troglodytes]
gi|74136211|ref|NP_001027997.1| cannabinoid receptor 1 [Macaca mulatta]
gi|237681067|ref|NP_001153698.1| cannabinoid receptor 1 isoform a [Homo sapiens]
gi|237681173|ref|NP_001153730.1| cannabinoid receptor 1 isoform a [Homo sapiens]
gi|237681175|ref|NP_001153731.1| cannabinoid receptor 1 isoform a [Homo sapiens]
gi|237681179|ref|NP_001153732.1| cannabinoid receptor 1 isoform a [Homo sapiens]
gi|297678646|ref|XP_002817177.1| PREDICTED: cannabinoid receptor 1-like isoform 1 [Pongo abelii]
gi|297678648|ref|XP_002817178.1| PREDICTED: cannabinoid receptor 1-like isoform 2 [Pongo abelii]
gi|297678650|ref|XP_002817179.1| PREDICTED: cannabinoid receptor 1-like isoform 3 [Pongo abelii]
gi|297678652|ref|XP_002817180.1| PREDICTED: cannabinoid receptor 1-like isoform 4 [Pongo abelii]
gi|297678654|ref|XP_002817181.1| PREDICTED: cannabinoid receptor 1-like isoform 5 [Pongo abelii]
gi|115562|sp|P21554|CNR1_HUMAN RecName: Full=Cannabinoid receptor 1; Short=CB-R; Short=CB1;
AltName: Full=CANN6
gi|61211374|sp|Q5IS73|CNR1_PANTR RecName: Full=Cannabinoid receptor 1; Short=CB-R; Short=CB1
gi|75072455|sp|Q71SP5|CNR1_MACMU RecName: Full=Cannabinoid receptor 1; Short=CB-R; Short=CB1
gi|9664881|gb|AAF97250.1|AF286025_1 cannabinoid receptor CB-1 [Macaca mulatta]
gi|29915|emb|CAA38699.1| cannabinoid receptor [Homo sapiens]
gi|736237|emb|CAA57018.1| central cannabinoid receptor [Homo sapiens]
gi|1657841|gb|AAB18200.1| CB1 cannabinoid receptor [Homo sapiens]
gi|8953372|emb|CAB96726.1| cannabinoid receptor 1 (brain) [Homo sapiens]
gi|29293105|gb|AAO67710.1| cannabinoid receptor 1 long isoform [Homo sapiens]
gi|49901677|gb|AAH74811.1| Central cannabinoid receptor, isoform a [Homo sapiens]
gi|49902500|gb|AAH74812.1| Central cannabinoid receptor, isoform a [Homo sapiens]
gi|56122284|gb|AAV74293.1| cannabinoid receptor 1 [Pan troglodytes]
gi|67550212|gb|AAY68486.1| cannabinoid receptor [Homo sapiens]
gi|71680857|gb|AAI00970.1| Cannabinoid receptor 1 (brain) [Homo sapiens]
gi|71681726|gb|AAI00971.1| Cannabinoid receptor 1 (brain) [Homo sapiens]
gi|71682703|gb|AAI00969.1| Cannabinoid receptor 1 (brain) [Homo sapiens]
gi|119568959|gb|EAW48574.1| cannabinoid receptor 1 (brain), isoform CRA_a [Homo sapiens]
gi|119568961|gb|EAW48576.1| cannabinoid receptor 1 (brain), isoform CRA_a [Homo sapiens]
gi|189054111|dbj|BAG36631.1| unnamed protein product [Homo sapiens]
gi|261857870|dbj|BAI45457.1| cannabinoid receptor 1 [synthetic construct]
Length = 472
Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGT 313
>gi|297478616|ref|XP_002690243.1| PREDICTED: cannabinoid receptor 1-like isoform 2 [Bos taurus]
gi|296484066|gb|DAA26181.1| cannabinoid receptor 1-like isoform 2 [Bos taurus]
Length = 439
Score = 37.5 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 138 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 194
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 195 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 252
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 253 LLLFIVYAYMYILWKAHSHAVRMIQRGT 280
>gi|154757574|gb|AAI51770.1| MARVELD2 protein [Bos taurus]
Length = 530
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 39/109 (35%), Gaps = 15/109 (13%)
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+L++ T++ L +G+ + + + G+ + + A + Y+
Sbjct: 256 FVLVVAGLAWVTTIIILVLGMSMYYRTILLDSNWWPLTEFGINVSLFILYMAAAI--VYV 313
Query: 233 VTFSTYSTMYAGL-------------ASIMTCLVFLYMLGVFFILGAEL 268
+ Y L + ++FL++ + +++GA +
Sbjct: 314 NDTNRGGLCYYPLFNTPVNAGFCRVEGGQIAAMIFLFVTMIVYLIGALV 362
>gi|170769629|ref|ZP_02904082.1| tRNA-processing ribonuclease BN [Escherichia albertii TW07627]
gi|170121437|gb|EDS90368.1| tRNA-processing ribonuclease BN [Escherichia albertii TW07627]
Length = 47
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I V++Y +LGAE+ ++ Y K+
Sbjct: 2 LAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 37
>gi|260881443|ref|ZP_05893441.1| putative arylsulfatase [Mitsuokella multacida DSM 20544]
gi|260848794|gb|EEX68801.1| putative arylsulfatase [Mitsuokella multacida DSM 20544]
Length = 682
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG---NLLLIIWNGR 181
RS + + + G + V ++ + +A++ + A ++ L +W G
Sbjct: 13 TRSRFTWKTLYTGILEGLKVFAFYLAVLSAFRGFFIAWLAPYMGASTGGHDIFLALWRGF 72
Query: 182 IY------ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
A L F+ + +H P + +I+ L GV+ + +S + A F Y
Sbjct: 73 RLSMQTAGALTLVSFVPGLLLHYLWPRWERRIVLALNGVLLSVLSILFVAS-FPFYRQFH 131
Query: 236 STYSTM 241
+ ++ M
Sbjct: 132 ANFNQM 137
>gi|190348483|gb|EDK40941.2| hypothetical protein PGUG_05039 [Meyerozyma guilliermondii ATCC
6260]
Length = 484
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 11/120 (9%)
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII---WNGR 181
RSW+ + + SV +V+ + + + N L+ W
Sbjct: 197 TRSWFK-----YAMTVGGSVLIVVFTVLHGVFEIKYDDADAVVDGPDNSELVSSYAWRAS 251
Query: 182 IYATMLAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
I + L F+ +F FL KI LP + +W + ++F Y+++ +T+
Sbjct: 252 IVSVHSVLQFWFMAALFKFTFLDKNPRKISYALPTLGLGLFTWALILIIFVVYLLSVTTF 311
>gi|156936289|ref|YP_001440205.1| phosphoethanolamine transferase [Cronobacter sakazakii ATCC
BAA-894]
gi|156534543|gb|ABU79369.1| hypothetical protein ESA_04188 [Cronobacter sakazakii ATCC BAA-894]
Length = 559
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 47/126 (37%), Gaps = 15/126 (11%)
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
L ++ V++ + A + + F L + + ++A + F+ L
Sbjct: 12 LSVLLAVYIGLFFNCAVLYRRFDGYAQNLSWVNGVSMVVELVATVLVTFFLLRVLSLLGR 71
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT--------CLVFLYM 257
++ +L V+ + ++Y+ TF Y +AS+MT + + ++
Sbjct: 72 RVWRVL------ASLVVLFSAAASYYM-TFMNVVIGYGIIASVMTTDIDLSKEVVGWQFI 124
Query: 258 LGVFFI 263
+ +
Sbjct: 125 AWMILV 130
>gi|71680284|gb|AAI00972.1| Cannabinoid receptor 1 (brain) [Homo sapiens]
Length = 472
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGT 313
>gi|258596997|ref|XP_001347367.2| conserved Plasmodium membrane protein [Plasmodium falciparum 3D7]
gi|254922394|gb|AAN35280.2| conserved Plasmodium membrane protein [Plasmodium falciparum 3D7]
Length = 1296
Score = 37.5 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 63/164 (38%), Gaps = 17/164 (10%)
Query: 102 AYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA 161
Y +++ +L L+R + + E + + R+ ++ + + + I
Sbjct: 1095 VYTNTSMYYSLNAILSRKFEIQENTNCVLGRINVILNSIMFLTVVYKIIMSTLNIIFIRI 1154
Query: 162 YVRKFFPALGNLLLIIWNGRIYATML-ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
Y+R F + + + +N + ++ A +I LI++ + K + +
Sbjct: 1155 YIRDPFSKIIEKICLFFNIKYNIAIIYAPYISLIYISYIVAINMKKFLQQI--------- 1205
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ + F+ Y FS + +++ L+ LY + +L
Sbjct: 1206 -IQISSFFSFYFKLFSNMWIL------LISELMGLYFVTNSLLL 1242
>gi|326381744|ref|ZP_08203437.1| hypothetical protein SCNU_02322 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199170|gb|EGD56351.1| hypothetical protein SCNU_02322 [Gordonia neofelifaecis NRRL
B-59395]
Length = 473
Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 38 SVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI 96
S+F I+FG G ++G + FV +V P +A I D++ ++ + L +
Sbjct: 252 SIFFAIIFGLMTMGVWIGGNIFVFSVS---PNPLPSSVAHAIFDQVTAMMDSTLRALTFL 308
Query: 97 SALAAA--YFS-------------SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
L A +F+ +G +LR +L+RA + R + R + ++
Sbjct: 309 GVLVAVVAWFAGPSRPATATRSVLGSGFASLRGALDRAGG--DTRGF--GRFLDKNRNVI 364
Query: 142 ASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
V + + M+ +F + P+ + AL + + + R
Sbjct: 365 LIVAIALGMAALFASRPVTFTAITWLVIALIVVAIAVEVLRRP 407
>gi|301623881|ref|XP_002941242.1| PREDICTED: rhomboid family member 1-like [Xenopus (Silurana)
tropicalis]
Length = 855
Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 37/138 (26%), Gaps = 14/138 (10%)
Query: 134 ISFGYVLLASVTLVIMSFVFV----AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
IS Y+L + + P + + R + L
Sbjct: 692 ISIIYILSGITGNLTSAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKL 751
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISW-VVGAVLFTHYIVTFSTYSTMYAGLASI 248
F +IF+ F + F + F YI F + MY I
Sbjct: 752 FAVVIFLFTFG---LLPWIDNF--AHFAGFVSGFFLSFAFLPYIS-FGKFD-MYRKRCQI 804
Query: 249 MTCLVFLY--MLGVFFIL 264
+ L+ + G+ +
Sbjct: 805 IIFLLIFFGLFSGLVVLF 822
>gi|328875610|gb|EGG23974.1| hypothetical protein DFA_06112 [Dictyostelium fasciculatum]
Length = 1780
Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 48/137 (35%), Gaps = 12/137 (8%)
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
TL ++ + + + G + + + LFI + ++
Sbjct: 1456 TTGLIYTLAVIFLLCGLWGMFQLGYVLYSHYFGVRHYPLRLVHMLTFTITLFIVIRCIYF 1515
Query: 199 F-LPAAKSKIMSILPGVIFTWISWVVGAVLFT-----HYIVTFS-----TYSTMYAGLAS 247
F LP+ + + S+ ++ +++ + FT YIV + + +
Sbjct: 1516 FILPSGRLESSSVADYILVVLPTFIYFS-AFTIITVLWYIVISAKVRHDNIMRRIGTIIA 1574
Query: 248 IMTCLVFLYMLGVFFIL 264
++ +++L + + I
Sbjct: 1575 VINAILYLLFIAIVLIF 1591
>gi|213427066|ref|ZP_03359816.1| ribonuclease BN, putative [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
Length = 86
Score = 37.5 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKSKIMSIL 211
+ + LA + ++ G + + LF L+ ++ FLP + KI L
Sbjct: 1 ILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLFAILVMLYYFLPNLSNRKISYTL 60
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFST 237
PG F + + LF+ Y+ +
Sbjct: 61 PGSAFVLLVILGLLTLFSSYLNYYVH 86
>gi|296198750|ref|XP_002746851.1| PREDICTED: cannabinoid receptor 1 isoform 3 [Callithrix jacchus]
Length = 447
Score = 37.5 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + LF + + A++ +S G +++R + R R+
Sbjct: 146 VYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 202
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 203 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIG--VTSV 260
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 261 LLLFIVYAYMYILWKAHSHAVRMIQRGT 288
>gi|291396598|ref|XP_002714619.1| PREDICTED: cannabinoid receptor 1-like isoform 2 [Oryctolagus
cuniculus]
Length = 448
Score = 37.5 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 147 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVGSL-FLTAIDR--YISIHRPLAYKRI 203
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 204 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 261
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 262 LLLFIVYAYMYILWKAHSHAVRMIQRGT 289
>gi|149722788|ref|XP_001503798.1| PREDICTED: cannabinoid receptor 1 (brain) isoform 2 [Equus
caballus]
Length = 411
Score = 37.5 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 110 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVGSL-FLTAIDR--YISIHRPLAYKRI 166
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 167 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 224
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 225 LLLFIVYAYMYILWKAHSHAVRMIQRGT 252
>gi|311064559|ref|YP_003971284.1| hypothetical protein BBPR_1188 [Bifidobacterium bifidum PRL2010]
gi|310866878|gb|ADP36247.1| Conserved hypothetical membrane spanning protein [Bifidobacterium
bifidum PRL2010]
Length = 490
Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 30/87 (34%), Gaps = 14/87 (16%)
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
++ ++ S + V A A + W ++L + +++ P
Sbjct: 182 LAIAALVYSILMVLSTFAPATLE-------------WGMLFSMAFISLLLTFAALYVTRP 228
Query: 202 AAKSKI-MSILPGVIFTWISWVVGAVL 227
K + + T + +V+G+V
Sbjct: 229 GGKVTGQLFAWIAAVLTVLGFVIGSVG 255
>gi|296815968|ref|XP_002848321.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238841346|gb|EEQ31008.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 481
Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 4/132 (3%)
Query: 133 LISFGYVLLASVTLVIMSFVFVA-IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ V+L ++ L + S + A + L+Y P L + + + +I
Sbjct: 254 FMAVVAVILYTLLLCLSSIIVGAHLADGLSYFTPSLPF--RFLRKVLDRLVVVLAFGCWI 311
Query: 192 GLIFVHLFLPAAKSKIMSI-LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
G IF+ ++ P I G I + LF Y + L + +
Sbjct: 312 GAIFLAIWTPDRDKPIQEQHWRGSAEFAIIFAPLGCLFRFYASLYLNPIIPSFPLGTFLV 371
Query: 251 CLVFLYMLGVFF 262
+V +LG+ F
Sbjct: 372 NMVGTLVLGMCF 383
>gi|206900499|ref|YP_002251098.1| tetratricopeptide repeat domain protein [Dictyoglomus thermophilum
H-6-12]
gi|206739602|gb|ACI18660.1| tetratricopeptide repeat domain protein [Dictyoglomus thermophilum
H-6-12]
Length = 867
Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
L + +F+ + I L F + T AL + I+V++
Sbjct: 20 LFVFAFLLLMIFLVPIAQPSFLKLHDISEIPKVTLIRVLTGFALLLWAIWVYVSRKELNL 79
Query: 206 KIMSILPGVIFTWISWVVGAVLFT--HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
I V ISW++ + +F+ Y+ F +Y L ++F + V
Sbjct: 80 PPKVISASVFLFLISWII-STIFSTNFYLSFFGSYMRQMGFLTYFFYFVIFFLLYNVV 136
>gi|327299976|ref|XP_003234681.1| chromosome condensation protein [Trichophyton rubrum CBS 118892]
gi|326463575|gb|EGD89028.1| chromosome condensation protein [Trichophyton rubrum CBS 118892]
Length = 513
Score = 37.1 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 2/131 (1%)
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
++ V+L ++ L + S V V LA P + + + + +IG
Sbjct: 293 FMAVIAVMLYTILLCLSSIV-VGAHLADGLSYFTPPLRFKFMRNVLDRLVVVLAFGCWIG 351
Query: 193 LIFVHLFLPAAKSKIMSI-LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
IF+ ++ P + G I + LF Y + L + +
Sbjct: 352 TIFLAIWTPDRYRPVRERHWRGSAEFAIIFAPIGCLFRFYASLYFNPFVSSFPLGTFLVN 411
Query: 252 LVFLYMLGVFF 262
++ +LGV F
Sbjct: 412 MIGTLVLGVCF 422
>gi|84579889|ref|NP_001033741.1| cannabinoid receptor 1 (brain) [Gallus gallus]
gi|118088753|ref|XP_001233604.1| PREDICTED: cannabinoid receptor 1 (brain) [Gallus gallus]
Length = 473
Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 173 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 229
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 230 VTRPKAVVAFCVMWTIAIVIAVLPLLGWNCKKLNSVCSDIFPLIDETYLMFWIG--VTSV 287
Query: 187 LALFIGLIFVHLFL 200
L LFI ++++
Sbjct: 288 LLLFIVYAYMYILW 301
>gi|115391984|ref|NP_001041727.1| cannabinoid receptor 1 [Taeniopygia guttata]
gi|9789727|sp|P56971|CNR1_TAEGU RecName: Full=Cannabinoid receptor 1; Short=CB-R; Short=CB1
gi|8575561|gb|AAF78049.1|AF255388_1 CB1 cannabinoid receptor [Taeniopygia guttata]
Length = 473
Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 173 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 229
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 230 VTRPKAVVAFCVMWTIAIVIAVLPLLGWNCKKLNSVCSDIFPLIDETYLMFWIG--VTSI 287
Query: 187 LALFIGLIFVHLFL 200
L LFI ++++
Sbjct: 288 LLLFIVYAYMYILW 301
>gi|330953474|gb|EGH53734.1| quinoprotein [Pseudomonas syringae Cit 7]
Length = 791
Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 10/131 (7%)
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ + + S+ L+ M VA + AY L L+ + T+ A+ +
Sbjct: 5 VTGIVIAILSLILLFMGAQLVAAGGSPAYSVIALGLLATATLVFLKRKSALTLYAVMMWG 64
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWIS-WVVGAVLF-THYIVTFSTYSTMY-----AGLA 246
I + + K I G +F I W+ + Y ST + + L
Sbjct: 65 ILIWIIYEVGLDKWQWIPRGDLFALIGLWLAMPWVVRPLYQARSSTDNRRFHPLLGGTLG 124
Query: 247 S---IMTCLVF 254
+ I+ L+F
Sbjct: 125 AMLLIVIALMF 135
>gi|293390145|ref|ZP_06634479.1| conserved permease [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950679|gb|EFE00798.1| conserved permease [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 355
Score = 37.1 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 43/127 (33%), Gaps = 14/127 (11%)
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L +L S + + ++R+ N L W + + + L +F
Sbjct: 233 LGVASLRPTSLSISGLSNYITFLRETGQDSKNFELTYWRKLFQPISVGVMMMLALSFIFG 292
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYAG---LASIMTCLVFL 255
P + S+ G + F Y+V F +S +Y + ++M ++FL
Sbjct: 293 P-----LRSVTAGARI----LIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFL 343
Query: 256 YMLGVFF 262
+
Sbjct: 344 IITWWLL 350
>gi|237681065|ref|NP_149421.2| cannabinoid receptor 1 isoform b [Homo sapiens]
gi|297678656|ref|XP_002817182.1| PREDICTED: cannabinoid receptor 1-like isoform 6 [Pongo abelii]
gi|54609770|gb|AAV35030.1| cannabinoid receptor 1 splice variant CB1b [Homo sapiens]
Length = 439
Score = 37.1 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + LF + + A++ +S G +++R + R R+
Sbjct: 138 VYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 194
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 195 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIG--VTSV 252
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 253 LLLFIVYAYMYILWKAHSHAVRMIQRGT 280
>gi|329935790|ref|ZP_08285594.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329304781|gb|EGG48655.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 261
Score = 37.1 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 81/259 (31%), Gaps = 29/259 (11%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + + + A + AL+++ P ++ A + V +
Sbjct: 13 LGELYRRAKDLELLHRAMGFATLALVTLAPLLIVVAAADPLRHEGFALWLVDGMGLSGRS 72
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ +V+ + L A + S +++ R + + +
Sbjct: 73 AEAVDRVFSPPSRVVGTTS---LWGGVLLAVFGLSFA-ASVQNGYERIWGLSSGPWHRVW 128
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R L+ V L+ ++ V L + + G LL W G
Sbjct: 129 R------QLVWLVALMAYLYLQVQSRTVLDGSYRIALSAGTGLLFFWWGP---------- 172
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYAGLASIM 249
FL + + +LPG + ++ + G +F+ + T T + Y + +++
Sbjct: 173 ------RFLLGHQVRWRELLPGALV-TVACLAGLRVFSFLVFTPLVVTNALSYGAVGTVL 225
Query: 250 TCLVFLYMLGVFFILGAEL 268
+ +G GA
Sbjct: 226 VVESWFAGVGFVVYGGALF 244
>gi|326916219|ref|XP_003204407.1| PREDICTED: cannabinoid receptor 1-like [Meleagris gallopavo]
Length = 473
Score = 37.1 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 173 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 229
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 230 VTRPKAVVAFCVMWTIAIVIAVLPLLGWNCKKLNSVCSDIFPLIDETYLMFWIG--VTSI 287
Query: 187 LALFIGLIFVHLFL 200
L LFI ++++
Sbjct: 288 LLLFIVYAYMYILW 301
>gi|209489342|gb|ACI49114.1| hypothetical protein Cbre_JD14.002 [Caenorhabditis brenneri]
Length = 1432
Score = 37.1 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 51/163 (31%), Gaps = 20/163 (12%)
Query: 41 PFIVFGAN---LAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTIS 97
P+ + +N + + +D G ++ + ++ P+ L
Sbjct: 433 PYSIDLSNPQPILPLIFGPIDAEDKMDTAMG------YDVYSNVLADIVCEPSLSLPLTI 486
Query: 98 ALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP 157
L A + +G AL L A R W +S + L ++ I F
Sbjct: 487 GLYAKW--GSGKSALLAKLKEAMHSF-SRDWLDGVSLSLSFALFFAIFTFIGLFSLTFTM 543
Query: 158 LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L ++ + + ++ + +F L+ V +
Sbjct: 544 LI--------AISNSITAYLISWAVFLFIFIVFCALVIVVYYG 578
>gi|261867782|ref|YP_003255704.1| permease [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413114|gb|ACX82485.1| conserved permease [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 355
Score = 37.1 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 43/127 (33%), Gaps = 14/127 (11%)
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L +L S + + ++R+ N L W + + + L +F
Sbjct: 233 LGVASLRPTSLSISGLSNYITFLRETGQDSKNFELTYWRKLFQPISVGVMMMLALSFIFG 292
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYAG---LASIMTCLVFL 255
P + S+ G + F Y+V F +S +Y + ++M ++FL
Sbjct: 293 P-----LRSVTAGARI----LIGICFGFLFYVVNELFGKFSLVYNTTPLIGALMPSVLFL 343
Query: 256 YMLGVFF 262
+
Sbjct: 344 IITWWLL 350
>gi|303241118|ref|ZP_07327627.1| protein serine/threonine phosphatase [Acetivibrio cellulolyticus
CD2]
gi|302591378|gb|EFL61117.1| protein serine/threonine phosphatase [Acetivibrio cellulolyticus
CD2]
Length = 560
Score = 37.1 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 53/145 (36%), Gaps = 17/145 (11%)
Query: 128 WYITRLISFGYVLLAS--------------VTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
W I+R I+ +LA + L I + I + + F P +
Sbjct: 125 WIISRAIASIGFVLAGYTSKMKKEWKVDKNIFLFIPVGLSTVILITVTRFHDFLPLMYEE 184
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ + + + + ++ +F+ I + F+ ++ G F+ + + + FT Y
Sbjct: 185 GVGLTDFKKNSELVIIFLFFISIVKFIHRYYKDRETVELGCAFSMVLSIYSEIAFTQYAS 244
Query: 234 TFSTYST---MYAGLASIMTCLVFL 255
+ Y+ +Y LA + V
Sbjct: 245 VYDIYNYLGHIYKFLAFFIIFKVMF 269
>gi|73662798|ref|YP_301579.1| DNA translocase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|72495313|dbj|BAE18634.1| putative DNA translocase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 816
Score = 37.1 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 48/157 (30%), Gaps = 35/157 (22%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF-IGLI 194
Y+L ++ ++I+ F + + FF L N R +L L I
Sbjct: 33 LRYILAIAIFVIIVLGAFQLG-IVGTMIDSFFNYL------FGNSRFLTYILILIGTIFI 85
Query: 195 FVHLFLPAAKSK---IMSILPGVIFTWISWV-----------VGAVLFTHYI-VTFSTYS 239
+ LP + + L ++ T I + V + +++ Y F +
Sbjct: 86 TYYKALPKTRRTVGAFVLQLALLLVTHIVFYFTNKVQAQREPVLSFVYSSYKHTNFPNFG 145
Query: 240 TMYA------------GLASIMTCLVFLYMLGVFFIL 264
+ I+ + L + +L
Sbjct: 146 GGLLGHYLLSISIPLISIVGIIIVTILLIASSIILLL 182
>gi|154292567|ref|XP_001546855.1| hypothetical protein BC1G_14807 [Botryotinia fuckeliana B05.10]
gi|150845888|gb|EDN21081.1| hypothetical protein BC1G_14807 [Botryotinia fuckeliana B05.10]
Length = 860
Score = 37.1 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ ++ + L + + A+ + N ++ I + +++F+ L F
Sbjct: 697 MIFTVITIIFLPLSFMSSIFGMNAVEFT-----GPSNSVMGIREQFEFMFPISIFLTLFF 751
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
++L L A + K+ ILP +F I + +
Sbjct: 752 LYLALKAPRPKLK-ILPFFLFFPIVIIRASW 781
>gi|258570873|ref|XP_002544240.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904510|gb|EEP78911.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 498
Score = 37.1 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 63/177 (35%), Gaps = 24/177 (13%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
+ T+ L A + +GV N +Y R W ++ ++ +++++
Sbjct: 299 SILTVQLLVTA--ALSGVSF----FNNSY-----RRWVQANSWMMFVSVIGALVFMLLTY 347
Query: 152 ----VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF-VHLFLPAAKSK 206
+ + L L+ +++ ++ I L L +G+ + LF K
Sbjct: 348 WKRKSYPSNLLFLSAFTLLEGYAISVVTSFYDSAIVMQALVLTLGIFLALTLFACQTKYD 407
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
S +P +F + ++V + + S +Y + +++ G +
Sbjct: 408 FTSWIP-YLFGALWFLVLFGFMSMFFQMGSKMELVYGAIGALI-------FSGYILV 456
>gi|229156611|ref|ZP_04284699.1| Sulfate transporter [Bacillus cereus ATCC 4342]
gi|228626780|gb|EEK83519.1| Sulfate transporter [Bacillus cereus ATCC 4342]
Length = 586
Score = 37.1 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 14/122 (11%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY--ATM 186
+I R ++ G+ +V + + +F L + I +Y T
Sbjct: 118 FIPRPVTIGFTSGIAVIIFTGQIASFLGLTGIKKHEEFIANLQEIFTHISTTNLYSVITA 177
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTW-ISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L F+ ++ LP PG + +S ++ V F+ Y+ T T Y +
Sbjct: 178 LICFLVILITPKILPKV--------PGSLVGIMVSTIIATVFFSDYVPTIGT---AYGTI 226
Query: 246 AS 247
+S
Sbjct: 227 SS 228
>gi|302307376|ref|NP_984016.2| ADL080Wp [Ashbya gossypii ATCC 10895]
gi|299788971|gb|AAS51840.2| ADL080Wp [Ashbya gossypii ATCC 10895]
Length = 863
Score = 37.1 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 62/162 (38%), Gaps = 11/162 (6%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R + + + +L+ ++ V V I L L +L +W G +++
Sbjct: 339 IVHRNNTCVVQMFTAGSLLGVAVVLVIIALMLGIRADISSYRHLILFPVWGGWYLVLLMS 398
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT-------HYIVTFSTYSTM 241
L L F K I+ G I + V F+ Y+V+ + +
Sbjct: 399 LLFCLDCYIWF--RGKVNYQFIMFGEIHSRKGNTVFNNDFSTTKISGHLYMVSLAFITVG 456
Query: 242 YAGLASIMTCLV--FLYMLGVFFILGAELNASMIIYYWRKKP 281
L S++ + +L++ + F LG +++ ++ Y+ +
Sbjct: 457 AVSLCSMVRATLAPWLWLCALLFALGFSMSSFILPYWRELRK 498
>gi|303320149|ref|XP_003070074.1| Chitin synthase D , putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240109760|gb|EER27929.1| Chitin synthase D , putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320031911|gb|EFW13868.1| class 6 chitin synthase [Coccidioides posadasii str. Silveira]
Length = 815
Score = 37.1 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 34/95 (35%), Gaps = 4/95 (4%)
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y+V + +L++ +L S I V V + + ++FP + + W
Sbjct: 50 YKVFVKADHWSVKLLAVIMAVLFSALRGIFLPVMVVTLPLPSTITRYFPE-RLVSFLQWF 108
Query: 180 GRIYATMLALFIGLIFVHLFLPA---AKSKIMSIL 211
+L + L ++ + +I +L
Sbjct: 109 AFWTFAVLLIVPWLFCIYRLVTNSLGRTKRIKEVL 143
>gi|308803681|ref|XP_003079153.1| MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplast precursor
(ISS) [Ostreococcus tauri]
gi|116057608|emb|CAL53811.1| MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplast precursor
(ISS) [Ostreococcus tauri]
Length = 1069
Score = 37.1 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 24/141 (17%)
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN---GRIYATMLALFIGLIFV- 196
L ++ + V + + P LG ++ +W R LALF G+ +
Sbjct: 95 LGLFLILTAYALPVFKSVMYPRLWTMVPFLGFVMYFVWTRDGVRELLVGLALFQGVSTLQ 154
Query: 197 ----HLFLPAAKSKIMSILPGVIFT----WISWVVGAVLFTHYIVTFSTYSTM--YAGLA 246
+ F + + ++ V F + A + Y Y YA
Sbjct: 155 ETRGYYFGTS--AAWSFVIWTVAFACTAPILVIFAVAYFNSPYFERMIKYRKRAKYAR-- 210
Query: 247 SIMTCLVFLYMLGVFFILGAE 267
++ + ++LG E
Sbjct: 211 ------MWWWFERYAYVLGYE 225
>gi|182413714|ref|YP_001818780.1| permease [Opitutus terrae PB90-1]
gi|177840928|gb|ACB75180.1| permease [Opitutus terrae PB90-1]
Length = 831
Score = 37.1 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 21/197 (10%)
Query: 22 EDGWAMASHISLSALLSVFP-----FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA- 75
++G A+ L FP F+V + L +V + P
Sbjct: 631 QNGLDQAAPPEFYVTLRQFPAPNDQFLVIRSRLDP----AALTASVRRAIQAVAPHETVF 686
Query: 76 --KPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM--RSWY 129
KP++ I +A LF A S+ G+ + + N + + E R
Sbjct: 687 DIKPMSQRIDDTVAGRRFNMSLFIFFGGVALLLSAIGIYGVL-AFNVSRKTRETGIRMAL 745
Query: 130 -ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R L LV+ V I LA A++ + + Y
Sbjct: 746 GAQRRDIILGTLGHGFALVLPGAV---IGLAGAWIGSRLLQSQLYAVSGTDLLTYVVGGL 802
Query: 189 LFIGLIFVHLFLPAAKS 205
+ + + F FLPA ++
Sbjct: 803 VLLVIAFTACFLPARRA 819
>gi|332003057|gb|AED90440.1| Transmembrane amino acid transporter family protein [Arabidopsis
thaliana]
Length = 474
Score = 37.1 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 81/222 (36%), Gaps = 11/222 (4%)
Query: 47 ANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS 106
+L +L A + +++ + W + D + ++ A + I Y
Sbjct: 247 LSLLSYLSAGGVISSILLALCLFWAGSV-----DGVGFHISGQALDITNIPVAIGIYGFG 301
Query: 107 NGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
G ++ N + E + LISF + L + + + F + +
Sbjct: 302 FGSHSVFP--NIYSSMKEPSKFPTVLLISFAFCTLFYIAVAVCGFTMFGDAIQSQFTLNM 359
Query: 167 FPALGNLLLIIWNGRIYAT---MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
P + + +W + L + ++ + +P++ K+ S ++F I V+
Sbjct: 360 PPHFTSSKIAVWTAVVTPMTKYALTITPVMLSLEELIPSSSRKMRSKGVSMLFRTIL-VL 418
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++ + F+T + + +++ L+F + + + G
Sbjct: 419 STLVVALTVPFFATVAALIGSFIAMLIALIFPCLCYISIMKG 460
>gi|330790140|ref|XP_003283156.1| hypothetical protein DICPUDRAFT_96277 [Dictyostelium purpureum]
gi|325087023|gb|EGC40405.1| hypothetical protein DICPUDRAFT_96277 [Dictyostelium purpureum]
Length = 1868
Score = 36.7 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 21/147 (14%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM-- 186
+ + I Y L LV + + I + Y++K + + LI ++ T+
Sbjct: 1573 FDQQTIGLMYTLAVLFLLVSLFGFYQVITIIYLYIKKVILSFQLIQLITITVTVFITIRS 1632
Query: 187 ----LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM- 241
L L ++ + LP + F+ S V+ Y+V +T+
Sbjct: 1633 VEGKLLNNPILDYILVVLP----TFIY------FSTFSIVLSLWFMIVYLVQKKNRNTVT 1682
Query: 242 ----YAGLASIMTCLVFLYMLGVFFIL 264
+ + L++L+ +G+ I
Sbjct: 1683 LLKRLHIIVLFINVLLYLFFIGIILIY 1709
>gi|186681598|ref|YP_001864794.1| pentapeptide repeat-containing protein [Nostoc punctiforme PCC
73102]
gi|186464050|gb|ACC79851.1| pentapeptide repeat protein [Nostoc punctiforme PCC 73102]
Length = 706
Score = 36.7 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 31/157 (19%)
Query: 128 WYITRLISFGYVLLASVT--------LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ I + + V L+ + F+ V + L Y + + A ++W
Sbjct: 96 YLILFINPILLTIFLIVAIYQGLNKALITIVFLAVFSCITLIYFQYYEAAAAFAGNLLWL 155
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL--------FTHY 231
+ T +F +I + + IL G F I+WVV V+ +
Sbjct: 156 FTVGITGAIIFTSVIILTKY-------YFWILIGAGF--IAWVVSTVIPLILGQPHLIVF 206
Query: 232 IVTFST----YSTMYAGLASIMTC--LVFLYMLGVFF 262
V FS+ ++YA +IM L +L+ + + F
Sbjct: 207 KVAFSSAIGVSISIYASQQAIMGMPQLAWLHSIAIAF 243
>gi|293568657|ref|ZP_06679972.1| HD domain protein [Enterococcus faecium E1071]
gi|291588617|gb|EFF20450.1| HD domain protein [Enterococcus faecium E1071]
Length = 730
Score = 36.7 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGRIYATMLALFIGLI 194
YV SV++V+M F + AY+ F+P A L+L + R M +F +
Sbjct: 323 LFYVTAMSVSVVLMKFFQLFQTEQAAYIPLFYPAAFAPLVLSFFLNRRAGIMAGIFQAVS 382
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY-AGLASIMTCLV 253
+ +F + + +++ ++ + +F+ + T + GL++ M ++
Sbjct: 383 ALFIFYDSIGTNFLTV-----------ILMSYVFSGLMATIVRRKRISEQGLSAAMWVII 431
Query: 254 FLYMLGVFFIL 264
F M+ V I+
Sbjct: 432 FPVMMDVILII 442
>gi|257886863|ref|ZP_05666516.1| HD domain-containing protein [Enterococcus faecium 1,141,733]
gi|257898043|ref|ZP_05677696.1| HD domain-containing protein [Enterococcus faecium Com15]
gi|293378304|ref|ZP_06624473.1| 7TM-HD extracellular [Enterococcus faecium PC4.1]
gi|293571619|ref|ZP_06682640.1| HD domain protein [Enterococcus faecium E980]
gi|257822917|gb|EEV49849.1| HD domain-containing protein [Enterococcus faecium 1,141,733]
gi|257835955|gb|EEV61029.1| HD domain-containing protein [Enterococcus faecium Com15]
gi|291608289|gb|EFF37590.1| HD domain protein [Enterococcus faecium E980]
gi|292643168|gb|EFF61309.1| 7TM-HD extracellular [Enterococcus faecium PC4.1]
Length = 730
Score = 36.7 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGRIYATMLALFIGLI 194
YV SV++V+M F + AY+ F+P A L+L + R M +F +
Sbjct: 323 LFYVTAMSVSVVLMKFFQLFQTEQAAYIPLFYPAAFAPLVLSFFLNRRAGIMAGIFQAVS 382
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY-AGLASIMTCLV 253
+ +F + + +++ ++ + +F+ + T + GL++ M ++
Sbjct: 383 ALFIFYDSIGTNFLTV-----------ILMSYVFSGLMATIVRRKRISEQGLSAAMWVII 431
Query: 254 FLYMLGVFFIL 264
F M+ V I+
Sbjct: 432 FPVMMDVILII 442
>gi|225028880|ref|ZP_03718072.1| hypothetical protein EUBHAL_03168 [Eubacterium hallii DSM 3353]
gi|224953799|gb|EEG35008.1| hypothetical protein EUBHAL_03168 [Eubacterium hallii DSM 3353]
Length = 686
Score = 36.7 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 14/103 (13%)
Query: 160 LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG---VIF 216
L V+ P L + L + I ++ GL+ ++L+ P K K S G
Sbjct: 109 LTLVKSVLPILSSYLEVWQIVAIVILLVIGVGGLVCLYLYSPEDK-KFKSAFSGFLYTAV 167
Query: 217 TWISWVVGAVL----------FTHYIVTFSTYSTMYAGLASIM 249
T + + + F + I + Y Y + +
Sbjct: 168 TVVCFCAVTYVGVGKGMLIKKFDNLIAGYKDYGVAYGFCVTAI 210
>gi|73973454|ref|XP_867911.1| PREDICTED: similar to central cannabinoid receptor isoform b
isoform 2 [Canis familiaris]
Length = 411
Score = 36.7 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 110 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 166
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 167 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 224
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 225 LLLFIVYAYMYILWKAHSHAVRMIQRGT 252
>gi|301623303|ref|XP_002940958.1| PREDICTED: cannabinoid receptor 1-like [Xenopus (Silurana)
tropicalis]
Length = 452
Score = 36.7 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 153 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLSYKRI 209
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 210 VTRTKAVIAFCMMWTIAIVIAVLPLFGWNCKKLRSVCSDIFPLIDETYLMFWIG--VTSV 267
Query: 187 LALFIGLIFVHLFL 200
L LFI ++++
Sbjct: 268 LLLFIVYAYMYILW 281
>gi|227551971|ref|ZP_03982020.1| HD family hydrolase [Enterococcus faecium TX1330]
gi|257895437|ref|ZP_05675090.1| HD domain-containing protein [Enterococcus faecium Com12]
gi|227178876|gb|EEI59848.1| HD family hydrolase [Enterococcus faecium TX1330]
gi|257832002|gb|EEV58423.1| HD domain-containing protein [Enterococcus faecium Com12]
Length = 730
Score = 36.7 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGRIYATMLALFIGLI 194
YV SV++V+M F + AY+ F+P A L+L + R M +F +
Sbjct: 323 LFYVTAMSVSVVLMKFFQLFQTEQAAYIPLFYPAAFAPLVLSFFLNRRAGIMAGIFQAVS 382
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY-AGLASIMTCLV 253
+ +F + + +++ ++ + +F+ + T + GL++ M ++
Sbjct: 383 ALFIFYDSIGTNFLTV-----------ILMSYVFSGLMATIVRRKRISEQGLSAAMWVII 431
Query: 254 FLYMLGVFFIL 264
F M+ V I+
Sbjct: 432 FPVMMDVILII 442
>gi|328861644|gb|EGG10747.1| hypothetical protein MELLADRAFT_33801 [Melampsora larici-populina
98AG31]
Length = 1263
Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Query: 111 ALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP-----LALAYVRK 165
+LR N+ Y + +T+ S LL T++ S V V + Y
Sbjct: 23 SLRRISNKIYPSSKRHPTAVTKASSAANTLLGLPTVIAASGVIVIGTAKGWAMVFDYASN 82
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF-LPAAKSKIMSILP 212
LG L+ I + T +A+ + +++L+ L +K S++P
Sbjct: 83 LKCVLGTDLIAISHDH---TFVAVGHTMGYIYLYDLAKSKQPARSVIP 127
>gi|297678658|ref|XP_002817183.1| PREDICTED: cannabinoid receptor 1-like isoform 7 [Pongo abelii]
gi|736239|emb|CAA57019.1| central cannabinoid receptor [Homo sapiens]
gi|56204261|emb|CAI19916.1| cannabinoid receptor 1 (brain) [Homo sapiens]
gi|119568960|gb|EAW48575.1| cannabinoid receptor 1 (brain), isoform CRA_b [Homo sapiens]
Length = 411
Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + LF + + A++ +S G +++R + R R+
Sbjct: 110 VYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVGSL-FLTAIDR--YISIHRPLAYKRI 166
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 167 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIG--VTSV 224
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 225 LLLFIVYAYMYILWKAHSHAVRMIQRGT 252
>gi|240047313|ref|YP_002960701.1| hypothetical protein MCJ_001850 [Mycoplasma conjunctivae HRC/581]
gi|239984885|emb|CAT04878.1| HYPOTHETICAL PROTEIN MCJ_001850 [Mycoplasma conjunctivae]
Length = 359
Score = 36.7 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 95/284 (33%), Gaps = 12/284 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-------LAGFLGAHQFVP 60
+ DI+ +E + ++ + L+S P + + +
Sbjct: 59 LRDIVKKTLEKTSNKTFAIISVSQAFYILVSFIPILTLITILLLFLSKIVPSFVHNGKEW 118
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFS----SNGVEALRISL 116
D + I I + V +K + I+ LA S +NG
Sbjct: 119 KFYDFIISEVLNKFIPGIQQSISFINNVTSKSMTNIAFLALLGSSFLIGANGYSRFINYY 178
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-PALGNLLL 175
+ +Y + +++I +L SF ++ + I ++ + Y FF ++ +
Sbjct: 179 SLSYNHTDPINFWILKLKSFLIIIGIVIITTIFIYLSSLLFFVFKYWSLFFKSSILFYNI 238
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ +L F+ + +LP+ K I PGV S V LF+ ++
Sbjct: 239 FFYFSSFVLLLLFFFVSSFLLLKYLPSFKLNRKWITPGVWIMMSSNTVFTFLFSLLVLNG 298
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++ + F + F+ N S ++RK
Sbjct: 299 WINYDKFGSTSTFLYLSTFSLYISQFYHFSIITNYSYSQKFFRK 342
>gi|22326569|ref|NP_195837.2| amino acid transporter family protein [Arabidopsis thaliana]
gi|20856761|gb|AAM26683.1| AT5g02170/T7H20_220 [Arabidopsis thaliana]
gi|29028738|gb|AAO64748.1| At5g02170/T7H20_220 [Arabidopsis thaliana]
gi|332003056|gb|AED90439.1| Transmembrane amino acid transporter family protein [Arabidopsis
thaliana]
Length = 526
Score = 36.7 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 31/222 (13%), Positives = 81/222 (36%), Gaps = 11/222 (4%)
Query: 47 ANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS 106
+L +L A + +++ + W + D + ++ A + I Y
Sbjct: 276 LSLLSYLSAGGVISSILLALCLFWAGSV-----DGVGFHISGQALDITNIPVAIGIYGFG 330
Query: 107 NGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
G ++ N + E + LISF + L + + + F + +
Sbjct: 331 FGSHSVFP--NIYSSMKEPSKFPTVLLISFAFCTLFYIAVAVCGFTMFGDAIQSQFTLNM 388
Query: 167 FPALGNLLLIIWNGRIYAT---MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
P + + +W + L + ++ + +P++ K+ S ++F I V+
Sbjct: 389 PPHFTSSKIAVWTAVVTPMTKYALTITPVMLSLEELIPSSSRKMRSKGVSMLFRTIL-VL 447
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++ + F+T + + +++ L+F + + + G
Sbjct: 448 STLVVALTVPFFATVAALIGSFIAMLIALIFPCLCYISIMKG 489
>gi|296198752|ref|XP_002746852.1| PREDICTED: cannabinoid receptor 1 isoform 4 [Callithrix jacchus]
Length = 411
Score = 36.7 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + LF + + A++ +S G +++R + R R+
Sbjct: 110 VYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVGSL-FLTAIDR--YISIHRPLAYKRI 166
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 167 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIG--VTSV 224
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 225 LLLFIVYAYMYILWKAHSHAVRMIQRGT 252
>gi|298504337|gb|ADI83060.1| cytochrome c oxidase, subunit II [Geobacter sulfurreducens KN400]
Length = 304
Score = 36.7 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 34/94 (36%), Gaps = 3/94 (3%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-IWNGRIYATMLALFIGLI 194
+L + L++ V + + Y R P + +W I+ + + + +
Sbjct: 15 VFMFILGACILLLTGITVVMVAFVIRYHRSRSPEPTSQAATNLWLEIIWTALPTVLVLAM 74
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
F + + ++ + + PG + + + F
Sbjct: 75 FYYGW--SSYLSLRHVPPGAMEVTAVARMWSWSF 106
>gi|116491171|ref|YP_810715.1| DNA segregation ATPase FtsK [Oenococcus oeni PSU-1]
gi|118587351|ref|ZP_01544777.1| DNA segregation ATPase, FtsK/SpoIIIE family [Oenococcus oeni ATCC
BAA-1163]
gi|290890687|ref|ZP_06553757.1| hypothetical protein AWRIB429_1147 [Oenococcus oeni AWRIB429]
gi|116091896|gb|ABJ57050.1| DNA segregation ATPase FtsK [Oenococcus oeni PSU-1]
gi|118432175|gb|EAV38915.1| DNA segregation ATPase, FtsK/SpoIIIE family [Oenococcus oeni ATCC
BAA-1163]
gi|290479662|gb|EFD88316.1| hypothetical protein AWRIB429_1147 [Oenococcus oeni AWRIB429]
Length = 787
Score = 36.7 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
++ ++++ +FV L V FF + + + + L I + L
Sbjct: 19 TILILVIDALFVLGIFRLGIVGNFFANIYKYV-----FGNFFVIFILLIAFFLNYWLLYK 73
Query: 203 AKSKI-MSILPGVIFTWISWVVGAVLF 228
KI I+ G+IF + ++ + LF
Sbjct: 74 KLPKIPTRIIVGIIFLALPFLAISSLF 100
>gi|323464608|gb|ADX76761.1| DNA translocase ftsK [Staphylococcus pseudintermedius ED99]
Length = 787
Score = 36.7 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 11/91 (12%)
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L+ + +VIM VF + +A + + ++ Y T L I L F+
Sbjct: 30 FTLVIVMAIVIMLGVFQLGLVGIA--------IDSFFNYLFGLTRYLTYFLLLIALGFIA 81
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
K L G I I+ + A L+
Sbjct: 82 Y---NGKLPKTRRLTGSIVLQIALLFVAQLY 109
>gi|319892295|ref|YP_004149170.1| Cell division protein FtsK [Staphylococcus pseudintermedius
HKU10-03]
gi|317161991|gb|ADV05534.1| Cell division protein FtsK [Staphylococcus pseudintermedius
HKU10-03]
Length = 787
Score = 36.7 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 11/91 (12%)
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L+ + +VIM VF + +A + + ++ Y T L I L F+
Sbjct: 30 FTLVIVMAIVIMLGVFQLGLVGIA--------IDSFFNYLFGLTRYLTYFLLLIALGFIA 81
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
K L G I I+ + A L+
Sbjct: 82 Y---NGKLPKTRRLTGSIVLQIALLFVAQLY 109
>gi|315655117|ref|ZP_07908019.1| OfeT family oxidase-dependent iron (Fe2+) transporter [Mobiluncus
curtisii ATCC 51333]
gi|315490598|gb|EFU80221.1| OfeT family oxidase-dependent iron (Fe2+) transporter [Mobiluncus
curtisii ATCC 51333]
Length = 545
Score = 36.7 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 30/96 (31%), Gaps = 2/96 (2%)
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
+ L + + + + ++ IL GVI + + A+LF
Sbjct: 237 GISGFFAAFLILLREGAEALLVVAALVTYALKAGRRDQLRGILVGVIIAVVLSIGLAILF 296
Query: 229 THYIVTFSTYS--TMYAGLASIMTCLVFLYMLGVFF 262
+ + + G+ + L+ +Y+
Sbjct: 297 GQLSASVQSGMGQELLEGITGLAAALMLIYVSNWIL 332
>gi|2494952|sp|Q98894|CNR1A_FUGRU RecName: Full=Cannabinoid receptor type 1A
gi|1545938|emb|CAA64174.1| cannabinoid receptor type 1A [Takifugu rubripes]
Length = 468
Score = 36.7 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 54/142 (38%), Gaps = 12/142 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 170 VYSFLDFHVFHKKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYRRI 226
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + +S + +PL + FP + L+ W G ++
Sbjct: 227 VTRTKAVIAFCMMWTISIIIAVLPLLGWNCKRLNSVCSDIFPLIDENYLMFWIG--VTSV 284
Query: 187 LALFIGLIFVHLFLPAAKSKIM 208
L LFI ++++ A +
Sbjct: 285 LVLFIIYAYIYILWKAHHHAVR 306
>gi|317486541|ref|ZP_07945364.1| hypothetical protein HMPREF0179_02722 [Bilophila wadsworthia 3_1_6]
gi|316922216|gb|EFV43479.1| hypothetical protein HMPREF0179_02722 [Bilophila wadsworthia 3_1_6]
Length = 326
Score = 36.7 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
VL V+L+ +FV +P L+ + + G++ ++ +FIG I
Sbjct: 102 LVLTLIVSLLFAVGLFVVVPHLLSIIMNWIGLGGDVEGFSFHIWDGLFKFLIFIGYIVGI 161
Query: 198 LFLPAAKSKI 207
FLP +
Sbjct: 162 AFLPDIRRVF 171
>gi|147900530|ref|NP_001079173.1| cannabinoid receptor 1 [Xenopus laevis]
gi|82241769|sp|Q801M1|CNR1_XENLA RecName: Full=Cannabinoid receptor 1; Short=CB-R; Short=CB1
gi|28894855|gb|AAM28314.1| CB1 cannabinoid receptor [Xenopus laevis]
gi|213623202|gb|AAI69426.1| Cannabinoid receptor 1/CB1 [Xenopus laevis]
gi|213625384|gb|AAI70488.1| Cannabinoid receptor 1/CB1 [Xenopus laevis]
Length = 470
Score = 36.7 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 54/142 (38%), Gaps = 12/142 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 171 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVGSL-FLTAIDR--YISIHRPMSYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 228 VTRTKAVIAFCMMWTIAIVIAVLPLFGWNCIKLRSVCSDIFPLIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIM 208
L LFI ++++ A +
Sbjct: 286 LLLFIVYAYMYILWKAHNHAVR 307
>gi|324997681|ref|ZP_08118793.1| integral membrane protein [Pseudonocardia sp. P1]
Length = 292
Score = 36.7 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 1/89 (1%)
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAG 244
L + + + L + + +LPG + T + + +L Y+ +
Sbjct: 164 ALIAAVLWLPIQRLLVGDRVTLRRLLPGAVVTGVGQTLATLLSGPYLRLAVGEQADRFGV 223
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
L + +L +L + A A +
Sbjct: 224 LGVAFVLVSWLLVLAYLLVGAAVFGAELA 252
>gi|88860557|ref|ZP_01135195.1| NADH dehydrogenase subunit N [Pseudoalteromonas tunicata D2]
gi|88817755|gb|EAR27572.1| NADH dehydrogenase subunit N [Pseudoalteromonas tunicata D2]
Length = 504
Score = 36.7 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R+ +++ + + L I+ V + +A ++ + ++ L G
Sbjct: 151 DKQKTRAALHYVILNLVGSSVFLIALGILYGVLGTLNIADMALKVSQLSGDDVALAKIGG 210
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + AL ++ +H++LP+ S M ++ G +F ++ V +F Y V F Y+
Sbjct: 211 LLLLIVFALKAAILPLHMWLPSTYSTAMPVV-GAMFAIMTKVGVYAMFRVYTVIFGAYAG 269
Query: 241 MYAGLASIMTCLVFLYMLGVFFIL 264
+A+ +L+ L + I
Sbjct: 270 SLDNMAA-----QWLWPLAIITIF 288
>gi|330805816|ref|XP_003290873.1| hypothetical protein DICPUDRAFT_81582 [Dictyostelium purpureum]
gi|325078958|gb|EGC32582.1| hypothetical protein DICPUDRAFT_81582 [Dictyostelium purpureum]
Length = 1718
Score = 36.7 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 69/176 (39%), Gaps = 17/176 (9%)
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+P + + DE + A+GL A+ S G+ + + + Y+ +E
Sbjct: 1376 SFFPIIRFESYIDESKEYFDKTAQGLIYTLAVIFLLTSLWGIFQITMVFVKKYKGIE--- 1432
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
RL+ F +++ LV + F+ L ++G+ +L++ IY T
Sbjct: 1433 --QIRLVHFLILIVTLFILVRTIYFFIIPSGVLQN-----NSVGDYVLVVLPTFIYFTAF 1485
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW--VVGAVLFTHYIVTFSTYSTM 241
+ I L ++ + + ++ L I W VV +LF ++ F Y+
Sbjct: 1486 TIIISLWYMIVSSKDSGKTLLKRL----KAIILWTNVVLYLLFIIIVLVF-NYTED 1536
>gi|315055353|ref|XP_003177051.1| peptidase family M28 family protein [Arthroderma gypseum CBS
118893]
gi|311338897|gb|EFQ98099.1| peptidase family M28 family protein [Arthroderma gypseum CBS
118893]
Length = 963
Score = 36.7 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 35/88 (39%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L+S ++L + I+ + + L L A G II+ G ++L
Sbjct: 659 WSIYLVSSAWILQFLLVAPIVLILLGQLGLFLTSATYQIGADGGSQFIIYIGIAVLSVLI 718
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIF 216
L F+H F + ++ +L G +
Sbjct: 719 LLPLFPFIHRFTYHIPTFMLFVLIGTLV 746
>gi|7340691|emb|CAB82990.1| putative protein [Arabidopsis thaliana]
Length = 516
Score = 36.7 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 56/146 (38%), Gaps = 4/146 (2%)
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E + LISF + L + + + F + + P + + +W +
Sbjct: 335 KEPSKFPTVLLISFAFCTLFYIAVAVCGFTMFGDAIQSQFTLNMPPHFTSSKIAVWTAVV 394
Query: 183 YAT---MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
L + ++ + +P++ K+ S ++F I V+ ++ + F+T +
Sbjct: 395 TPMTKYALTITPVMLSLEELIPSSSRKMRSKGVSMLFRTIL-VLSTLVVALTVPFFATVA 453
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
+ +++ L+F + + + G
Sbjct: 454 ALIGSFIAMLIALIFPCLCYISIMKG 479
>gi|331703679|ref|YP_004400366.1| transmembrane protein [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328802234|emb|CBW54388.1| Conserved hypothetical protein, predictedtransmembrane protein
[Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 519
Score = 36.7 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 76/201 (37%), Gaps = 16/201 (7%)
Query: 74 IAKPITDEILQVLAVPA---KGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEMRSWY 129
++ I+ +LQV+ + L TI + + + A+ I + Y++ +
Sbjct: 305 LSGIISGVLLQVIDQNSSNITALITIGSFIMLWAIFAIIFHAIYIFFKKEYKINKH---I 361
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + Y LL V + + + V I F L + T L +
Sbjct: 362 LVKPAITYYSLLLLVFMTLTAGC-VGIAQVGNIAEPFTAPLMTKWFGALAYLVLTTCLVM 420
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST------YSTMYA 243
++ V + + + I+ ++ I W + +++ F+ YS + +
Sbjct: 421 YVLATLVDNYRSGKQLSVKLIINNIVLPAIIWTITTGA--NFVALFAKSQEVMDYSNLIS 478
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
G+ +++ L ++Y+ F++
Sbjct: 479 GINTLVMVLFWIYLFTAQFLI 499
>gi|307103310|gb|EFN51571.1| hypothetical protein CHLNCDRAFT_140060 [Chlorella variabilis]
Length = 519
Score = 36.7 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 11/99 (11%)
Query: 90 AKGLFTISALAAAY-FSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
A+GLFT++ LAA + S+ V A+ LN R RL Y LLA +
Sbjct: 252 AQGLFTLAFLAALWVTSARLVAAV---LN-------TRLKRRVRLFQAAYSLLAVAGVAA 301
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ V P + + + + + L + +
Sbjct: 302 LGVSLVRGPFSWLNIGCWAGYVATVALTVALVLWEVAVW 340
>gi|255034953|ref|YP_003085574.1| acriflavin resistance protein [Dyadobacter fermentans DSM 18053]
gi|254947709|gb|ACT92409.1| acriflavin resistance protein [Dyadobacter fermentans DSM 18053]
Length = 1086
Score = 36.7 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 63/187 (33%), Gaps = 16/187 (8%)
Query: 57 QFVPTVIDVVFGAWPEVI--------AKPITDEILQVLAVPAKGLFTISALAAAYFSSNG 108
Q + I + PE + + + + + +L A G ++ L F +
Sbjct: 297 QNLKKAIPRIQNTLPEDVKVSYEFDQSTYVMNSVKSLLTEGAIGAI-LTGLMVLLFLGDA 355
Query: 109 VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
AL + L ++ + + + L+ + L I + + + + + F
Sbjct: 356 RGALIVILTIPTSIIAGVLFLNLFGQTINIMTLSGLALAI-GILVDESTVTIENIHQHFD 414
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L IW+ L I + +F PA +PG +F + A+ F
Sbjct: 415 MGKPKALAIWDACKEIAFPKLLILFCILAVFAPAFTMGG---IPGSLF---LPLALAIGF 468
Query: 229 THYIVTF 235
+ + F
Sbjct: 469 SMIVSYF 475
>gi|171742850|ref|ZP_02918657.1| hypothetical protein BIFDEN_01965 [Bifidobacterium dentium ATCC
27678]
gi|171278464|gb|EDT46125.1| hypothetical protein BIFDEN_01965 [Bifidobacterium dentium ATCC
27678]
Length = 435
Score = 36.4 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA--G 244
+ + + + +++ LP + L V FT + +G+ F F + Y
Sbjct: 1 MLMVLRTMLLYVHLP---LTLWGWLTLVAFTVGGFRIGSKPFICSQKWFDNHQERYNAES 57
Query: 245 LASIMTCLVFLYMLGVFFI 263
+ + +++ ++ G I
Sbjct: 58 IGAAAAIVLWFWLHGCCLI 76
>gi|257069159|ref|YP_003155414.1| ABC-type dipeptide/oligopeptide/nickel transporter ATPase
[Brachybacterium faecium DSM 4810]
gi|256559977|gb|ACU85824.1| ABC-type dipeptide/oligopeptide/nickel transport system, ATPase
component [Brachybacterium faecium DSM 4810]
Length = 621
Score = 36.4 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 54/149 (36%), Gaps = 20/149 (13%)
Query: 89 PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE----MRSWYITRLISFGYVLL-AS 143
P++GL +I+ + A S G + + + R E R+ +R+ + +L
Sbjct: 132 PSRGLLSIAIVIAI-TSWAGSARVIRAQTLSLRNREFVEAARATGESRIRIMFFEVLPNM 190
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT--MLALFIGLIFVHLFLP 201
+ LV F+F I LA F LG+L W +Y AL G
Sbjct: 191 LPLVASGFLFSVIGGILAEAGLAFLGLGSLTTTSWGSMLYFAQNSQALLAG--------- 241
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+ + PG+ I + + F
Sbjct: 242 ---AWWWYVPPGLAIAVIGAGLALINFAI 267
>gi|4959367|gb|AAD34320.1|AF107262_1 central cannabinoid receptor [Homo sapiens]
Length = 472
Score = 36.4 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + LF + + A+ +S G +++R V R R+
Sbjct: 171 VYSFIDFHVFHRKDSRNVFLFKLGGVTASLTASVG-SLFLTAIDR--YVSIHRPLAYKRI 227
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ +PL + FP + L+ W G ++
Sbjct: 228 VTRPKAVVAFCLMWTIAIAIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIG--VTSV 285
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 286 LLLFIVYAYMYILWKAHSHAVRMIQRGT 313
>gi|223041888|ref|ZP_03612074.1| ABC-type multidrug transport system ATPase component
[Actinobacillus minor 202]
gi|208435929|gb|ACI28438.1| ABC-type multidrug transport system ATPase component
[Actinobacillus minor 202]
Length = 909
Score = 36.4 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 18/147 (12%)
Query: 127 SWYITRLISFGYVLLASVTLVIMSF-----VFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + +S+ ++ +V + + L + F + + +
Sbjct: 765 PYIVLAFLSYLVLIFIAVVIFGVPIKGSVWAMFLGALLVVTASTGFGLVVSSFVKSQVAA 824
Query: 182 IYATMLALFI------GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++AT + + + G+++ LP + I + PG F IS Y
Sbjct: 825 LFATAILVMVPTLNFSGMMYPTATLPTSTYVIAHLFPGAWFQLISLGGFTKGLGFY---- 880
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFF 262
+ Y L I+ V+L + +
Sbjct: 881 -DFIANYGAL--IIIYSVYLILASLSL 904
>gi|219883027|ref|YP_002478191.1| hypothetical protein Achl_4423 [Arthrobacter chlorophenolicus A6]
gi|219862033|gb|ACL42374.1| hypothetical protein Achl_4423 [Arthrobacter chlorophenolicus A6]
Length = 994
Score = 36.4 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 4/101 (3%)
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+S +A V ++I +F V + L + + +++ + +F +
Sbjct: 491 VSIIVAKIAMVIMIITAFFLVIMCLLPSAGTDKLAGF--MKMLLGMNIFVFGIQMIFALI 548
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ L + + G +F + W + L Y++
Sbjct: 549 AVLSKMLQGLGATFLGGD-GSLFATL-WTGLSPLLAVYLLH 587
>gi|221635696|ref|YP_002523572.1| putative ribonuclease BN [Thermomicrobium roseum DSM 5159]
gi|221157406|gb|ACM06524.1| putative ribonuclease BN [Thermomicrobium roseum DSM 5159]
Length = 154
Score = 36.4 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 1/107 (0%)
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFL-PAAKSKIMSILPGVIFTWISWVVGAVLFT 229
G L + R + +LA F+ + ++ FL PA + + T ++W T
Sbjct: 40 GIALALPAALRFGSGLLASFVLFVLLYRFLLPAPSPSWRLVSGSALATALAWEATKFAIT 99
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + S +Y L ++ LV + + GA L A+M
Sbjct: 100 TAVQSIGGGSAVYGLLGAVTGILVAAQLAAALTLYGAALLATMTEQR 146
>gi|195445736|ref|XP_002070462.1| GK12071 [Drosophila willistoni]
gi|194166547|gb|EDW81448.1| GK12071 [Drosophila willistoni]
Length = 1060
Score = 36.4 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 30/71 (42%)
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ +L + + + L+ ++FV + + +G++ + N + AT
Sbjct: 559 PFWRMKLPATVFSFSVVLLLIALAFVALLAVVVYRMSMMAALKVGSVPMTTSNAIVVATA 618
Query: 187 LALFIGLIFVH 197
A F+ L ++
Sbjct: 619 SAAFVNLCLLY 629
>gi|50422861|ref|XP_460008.1| DEHA2E16258p [Debaryomyces hansenii CBS767]
gi|49655676|emb|CAG88261.1| DEHA2E16258p [Debaryomyces hansenii]
Length = 636
Score = 36.4 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 63/164 (38%), Gaps = 9/164 (5%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
+S + + S + A+ + N+ R + + WY+ + I F
Sbjct: 456 IPLSVVGSILASKKSMLAIPVRTNQIPRQIPQQPWYLRNFP-------LMIISGIFPFGS 508
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL--PAAKSKIMSIL 211
+A+ + Y +F + + ++ I + + I ++ V+ L K S+
Sbjct: 509 IAVEMYFIYSSLWFNKIFYMFGFLFFCFILMMLTSALISVLMVYYTLCSENYKWHWKSLF 568
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
G + ++ L + Y + + +Y G +++ + LVFL
Sbjct: 569 IGGGCSIYVFLHSLFLISGYKLEGVSSIVLYVGYSAVTSLLVFL 612
>gi|29832278|ref|NP_826912.1| hypothetical protein SAV_5735 [Streptomyces avermitilis MA-4680]
gi|29609397|dbj|BAC73447.1| putative membrane protein [Streptomyces avermitilis MA-4680]
Length = 1514
Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 7/116 (6%)
Query: 133 LISFGYVLLASVTLVIMSFVF---VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L V++ S + + F V +PL A + L I + G + A
Sbjct: 151 LWPVFTVVVGSTSAAALPGAFLPWVLLPLTNERHSARVAAFRSALFIPFMGGVNAAATLA 210
Query: 190 FIGLIFVHLF----LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + ++L P + I + GV+ WVV ++ Y F Y
Sbjct: 211 SLLPVGLYLLSRPRGPRRRKLIGWWVLGVLLATAWWVVPLLMLGIYGENFLPYVET 266
>gi|302917368|ref|XP_003052427.1| hypothetical protein NECHADRAFT_103644 [Nectria haematococca mpVI
77-13-4]
gi|256733367|gb|EEU46714.1| hypothetical protein NECHADRAFT_103644 [Nectria haematococca mpVI
77-13-4]
Length = 1484
Score = 36.4 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 50/176 (28%), Gaps = 37/176 (21%)
Query: 123 VEMRSWYITRLISFGYVLLASVTL-------------VIMSFVFVAIPLALAYVRKFFPA 169
E ++++ LI++ + + +S V V + P
Sbjct: 640 REPGNFFLYFLITYICTFVFIAFFRTMAAISKTVSQAMALSGVMVLALVVYVGFTITVPE 699
Query: 170 LGNLLLII-WNGRIYATMLAL---------FIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
+ I W IY L F + P + +PG +
Sbjct: 700 MKPWFSWIRWINPIYYAFEILVANEFHGRQFTCSSIFPPYTPNIGDSWICTVPGAV--AG 757
Query: 220 SWVVGAVLFTHYIVTFSTYSTMY----AGLASIMTCLVFLYMLGVFFILGAELNAS 271
W V F + Y Y L + L+ + +++ ELN++
Sbjct: 758 EWTVSGDAFIA-----ANYEYYYSHVWRNLGILFAFLIGF---TIIYLVATELNSA 805
>gi|330841699|ref|XP_003292830.1| hypothetical protein DICPUDRAFT_157583 [Dictyostelium purpureum]
gi|325076898|gb|EGC30649.1| hypothetical protein DICPUDRAFT_157583 [Dictyostelium purpureum]
Length = 470
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 2/99 (2%)
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
K+ +GN + II Y ++ + G FL K IL + + +
Sbjct: 218 NKYLIEVGNWIGIIVTNAFYLFLILIGSGWSTSVYFLSTINLKWHFIL--IFISTCISLA 275
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ + YI Y L + L++ + F
Sbjct: 276 MSNISNIYISDLDNYIYFLDTLPGYIVLLLYFTITTYFV 314
>gi|146414227|ref|XP_001483084.1| hypothetical protein PGUG_05039 [Meyerozyma guilliermondii ATCC
6260]
Length = 484
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 11/120 (9%)
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII---WNGR 181
R W+ + + SV +V+ + + + N L+ W
Sbjct: 197 TRLWFK-----YAMTVGGSVLIVVFTVLHGVFEIKYDDADAVVDGPDNSELVSSYAWRAS 251
Query: 182 IYATMLAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
I + L L F+ +F FL KI LP + +W + ++F Y+++ +T+
Sbjct: 252 IVSVHLVLQFWFMAALFKFTFLDKNPRKISYALPTLGLGLFTWALILIIFVVYLLSVTTF 311
>gi|302551174|ref|ZP_07303516.1| coagulation factor 5/8 type domain-containing protein [Streptomyces
viridochromogenes DSM 40736]
gi|302468792|gb|EFL31885.1| coagulation factor 5/8 type domain-containing protein [Streptomyces
viridochromogenes DSM 40736]
Length = 1380
Score = 36.4 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 11/156 (7%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
++ A + + E LR+ + L ++ S + +
Sbjct: 118 WLSVVVSVAFWGALRLAERLRVGS----GASRLLGAVAYALWPVFTTVIGSTSAAALPGA 173
Query: 153 F---VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF----LPAAKS 205
F V +PL AL + LL+ + G + A+ + + ++L P +
Sbjct: 174 FLPWVLLPLTNERYTARVAALRSALLVPFMGGVNASATLASLLPVGLYLLSRPPGPRQRK 233
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
I P VI W V +L Y F Y
Sbjct: 234 LIAWWAPAVIVVTAWWWVPLLLLGVYGENFLPYIET 269
>gi|320354811|ref|YP_004196150.1| cytochrome bd quinol oxidase subunit 1 apoprotein [Desulfobulbus
propionicus DSM 2032]
gi|320123313|gb|ADW18859.1| cytochrome bd quinol oxidase subunit 1 apoprotein [Desulfobulbus
propionicus DSM 2032]
Length = 851
Score = 36.4 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 4/93 (4%)
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFF-PALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+T+V S V I +A + L + + W +L + ++ +
Sbjct: 63 FFLVLTMVAGSITGVGIWFIIALLNPAATSILIHTFVFAWASEWVFFLLEIVSLFLYAYT 122
Query: 199 FL---PAAKSKIMSILPGVIFTWISWVVGAVLF 228
F P+ + I G + + + G + F
Sbjct: 123 FGRLHPSRHRVLGWIYFGSAWMSLFLINGIIGF 155
>gi|224081497|ref|XP_002306435.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
gi|222855884|gb|EEE93431.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
[Populus trichocarpa]
Length = 928
Score = 36.4 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 16/123 (13%)
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS 209
S + V P+ L ++W ++ + I H +
Sbjct: 570 SGLVVVAPV-QKLNSNSLAFLRPFTPMMWLVTGIFFLVVGVVVWILEHRVNDDFRGPPKR 628
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
I W + LF FS + L L++L++ IL +
Sbjct: 629 Q-----IATIIWFSFSTLF------FSHKQNTVSSLGRF-VLLIWLFV---VLILNSSYT 673
Query: 270 ASM 272
AS+
Sbjct: 674 ASL 676
>gi|126658679|ref|ZP_01729825.1| hypothetical protein CY0110_30446 [Cyanothece sp. CCY0110]
gi|126620116|gb|EAZ90839.1| hypothetical protein CY0110_30446 [Cyanothece sp. CCY0110]
Length = 129
Score = 36.0 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
F I+ ++ + + + +D ++A+ ++ +S+ P ++ ++AG G +
Sbjct: 2 NFRILIKLLKETFQEWQGDDASSLAAALAYYTSVSLAPLLIIVISIAGAVFGEEAARGEI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
+ + G A+ I I +I ++ F ++GV A L+ SLN+ +
Sbjct: 62 VSQIQGLVGRNGAELIETAIENANQPQISNFASIISIIILLFGASGVFAQLQKSLNKVWE 121
Query: 122 VV 123
V
Sbjct: 122 VE 123
>gi|145522019|ref|XP_001446859.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414348|emb|CAK79462.1| unnamed protein product [Paramecium tetraurelia]
Length = 723
Score = 36.0 bits (82), Expect = 5.8, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 57/162 (35%), Gaps = 15/162 (9%)
Query: 43 IVFGANLA-GFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
++F L G QF + ++ + P + + I Q+ + +F IS +
Sbjct: 67 VIFVITLTNGIQSLTQFSTALYVLIEDSAPVKLFCDVIMNINQITGITTSIVFVISNINI 126
Query: 102 AYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA 161
FS+ L Y +E + I L ++ ++++ F+ ++
Sbjct: 127 FIFSA-------YPLALVYNTLEK----TVKFIRIFNYTLTALIIILVILGFLFNDNIIS 175
Query: 162 YVRKFFPALGNLLLIIWNGRI---YATMLALFIGLIFVHLFL 200
A+ W+ I Y + LF + +++F
Sbjct: 176 ITLNGMCAISATHQSFWDYIIASFYLFVFLLFATMSIIYVFT 217
>gi|206969254|ref|ZP_03230209.1| sulfate permease family protein [Bacillus cereus AH1134]
gi|218233633|ref|YP_002368108.1| sulfate permease family protein [Bacillus cereus B4264]
gi|229151578|ref|ZP_04279780.1| Sulfate transporter [Bacillus cereus m1550]
gi|229179679|ref|ZP_04307029.1| Sulfate transporter [Bacillus cereus 172560W]
gi|206736295|gb|EDZ53453.1| sulfate permease family protein [Bacillus cereus AH1134]
gi|218161590|gb|ACK61582.1| sulfate permease family protein [Bacillus cereus B4264]
gi|228603785|gb|EEK61256.1| Sulfate transporter [Bacillus cereus 172560W]
gi|228631822|gb|EEK88449.1| Sulfate transporter [Bacillus cereus m1550]
Length = 587
Score = 36.0 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 40/120 (33%), Gaps = 14/120 (11%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII--WNGRIYATM 186
+I R ++ G+ +V + + +F L L I N T
Sbjct: 118 FIPRPVTIGFTSGIAVIIFTGQIASFLGLTGIKKHEEFLANLKELFTHISTTNFYSVITA 177
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIF-TWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L F ++ LP PG + IS V+ V F+ Y+ T T Y +
Sbjct: 178 LICFFVILITPKILPKV--------PGSLVGVVISTVIATVFFSGYVPTIGT---AYGTI 226
>gi|47219037|emb|CAG00176.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1472
Score = 36.0 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 22/148 (14%)
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y V + + +L+ S T + ++ V + ++++ +G + W
Sbjct: 143 IYDV-----FVLAIQNQLPLLLVLSFTYISLNIVRSVVQEKERKLKEYMRMMGLSNWLHW 197
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP-GVIFT----------WISWVVGAVL 227
+ L + I + FV L L + + P G + T +++ + +
Sbjct: 198 SAWFLMFFLFISISVFFVTLLL------CIRVSPNGAVLTYSDPTLVFVFLLTFTIATIN 251
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFL 255
F+ I TF + + + A + L +L
Sbjct: 252 FSFMISTFFSRANLAAAAGGFIYFLTYL 279
>gi|261190893|ref|XP_002621855.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239590899|gb|EEQ73480.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 638
Score = 36.0 bits (82), Expect = 6.0, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 43/136 (31%), Gaps = 40/136 (29%)
Query: 152 VFVAIPLALAYVRKFFPALGN----LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
V V I L L ++ GN L+ W R LAL IGLI +
Sbjct: 197 VVVTIMLLLTWIPSKIRQRGNDRCLATLLQWTTRWSDIGLALTIGLIVL----------- 245
Query: 208 MSILPGVIFTWISW--------------------VVGAVLFTHYIVTFSTYSTMYAGLA- 246
I+ G I + W ++F ++ S +S + +A
Sbjct: 246 -FIVNGAILSVKLWRTAKLDTQDRIAKSSIVYYLAGTTIIFATFLRGVSNFSLLMGSIAL 304
Query: 247 ---SIMTCLVFLYMLG 259
I+ ++L
Sbjct: 305 NLFGIVYAFIYLLFCA 320
>gi|66267480|gb|AAH95513.1| CNR1 protein [Homo sapiens]
Length = 471
Score = 36.0 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 51/135 (37%), Gaps = 14/135 (10%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + LF + + A++ +S G +++R + R R+
Sbjct: 170 VYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 226
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLA-------LAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G
Sbjct: 227 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFWIG----VT 282
Query: 187 LALFIGLIFVHLFLP 201
L + +++ ++++P
Sbjct: 283 SVLLLFIVYAYMYIP 297
>gi|290976478|ref|XP_002670967.1| predicted protein [Naegleria gruberi]
gi|284084531|gb|EFC38223.1| predicted protein [Naegleria gruberi]
Length = 750
Score = 36.0 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 52/147 (35%), Gaps = 18/147 (12%)
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NL 173
+ Y E + + R IS + VI S + + I + + Y+ N
Sbjct: 386 FYKKYYESERKETFWFRFISSKFTY------VICSVLVIGIEIIVIYLASDIEDFSIKND 439
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+L +A M+ L +G ++L K + G + W Y
Sbjct: 440 VLDYLTVAAFAVMIILSLGSTVLYLLANRVIIKQL----GSFVQVVKWYFL------YDD 489
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGV 260
TF ++ + + + ++ +++ + +
Sbjct: 490 TFKYHAEFFTVIITAISGVLYFLLSWI 516
>gi|326480195|gb|EGE04205.1| chromosome condensation protein [Trichophyton equinum CBS 127.97]
Length = 461
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 2/131 (1%)
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
++ V+L ++ L + S V V LA P + + + + +IG
Sbjct: 241 FMAVVAVMLYTILLCLSSIV-VGAHLADGLSYFTPPLRFKFVRNVLDRLVVVLAFGCWIG 299
Query: 193 LIFVHLFLPAAKSKIMSI-LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
IF+ ++ P I G I + LF Y + L + +
Sbjct: 300 TIFLAIWTPDRYRPIQEQHWRGSAEFAIIFAPIGCLFRFYASLYFNPLISSFPLGTFLVN 359
Query: 252 LVFLYMLGVFF 262
++ +LGV F
Sbjct: 360 MIGTLVLGVCF 370
>gi|326472897|gb|EGD96906.1| chromosome condensation protein [Trichophyton tonsurans CBS 112818]
Length = 461
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 2/131 (1%)
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
++ V+L ++ L + S V V LA P + + + + +IG
Sbjct: 241 FMAVVAVMLYTILLCLSSIV-VGAHLADGLSYFTPPLRFKFVRNVLDRLVVVLAFGCWIG 299
Query: 193 LIFVHLFLPAAKSKIMSI-LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
IF+ ++ P I G I + LF Y + L + +
Sbjct: 300 TIFLAIWTPDRYRPIQEQHWRGSAEFAIIFAPIGCLFRFYASLYFNPLISSFPLGTFLVN 359
Query: 252 LVFLYMLGVFF 262
++ +LGV F
Sbjct: 360 MIGTLVLGVCF 370
>gi|320095457|ref|ZP_08027134.1| OfeT family oxidase-dependent iron (Fe2+) transporter [Actinomyces
sp. oral taxon 178 str. F0338]
gi|319977650|gb|EFW09316.1| OfeT family oxidase-dependent iron (Fe2+) transporter [Actinomyces
sp. oral taxon 178 str. F0338]
Length = 550
Score = 36.0 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 14/107 (13%), Positives = 32/107 (29%)
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
A + P L + + L + + +L K K + GV
Sbjct: 264 GQAASDAASQTTPWLSAFVPALLVILREGMEAILVVAAVLAYLGKSGHKDKARVVWSGVA 323
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ A LF ++ + G+A++ + +++
Sbjct: 324 IALGLSALLAFLFNYFTSLAGANQELLEGVAALFAVAMLIWVSNWMI 370
>gi|227537889|ref|ZP_03967938.1| RND superfamily resistance-nodulation-cell division [ligand]:proton
(H+) antiporter [Sphingobacterium spiritivorum ATCC
33300]
gi|227242274|gb|EEI92289.1| RND superfamily resistance-nodulation-cell division [ligand]:proton
(H+) antiporter [Sphingobacterium spiritivorum ATCC
33300]
Length = 1122
Score = 36.0 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 69/198 (34%), Gaps = 17/198 (8%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LL P + + + H F V+ V+ A P + +L+ +
Sbjct: 543 LLIAVPIALLLIFILLYFTFHSFKEAVL--VYTAIPMSAIGGVFALLLRDMPFSISAGVG 600
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
AL NG+ L + NR E + I R+I L V +
Sbjct: 601 FIALFGV-AVLNGIV-LIATFNRL--EKEGWNEIIPRIIEGAKTRLRPVLMTASVASLGF 656
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL----PAAKSKIMSIL 211
+P+AL+ L ++ G I AT L LF+ + +F+ P SK +I
Sbjct: 657 LPMALS-TSAGAEVQKPLATVVIGGLISATALTLFVLPLLYLVFMRNQKPPKNSKTKAIA 715
Query: 212 PGVIFTWISWVVGAVLFT 229
P + + + F+
Sbjct: 716 P------VLLLFVFLGFS 727
>gi|262283039|ref|ZP_06060806.1| DNA translocase ftsK [Streptococcus sp. 2_1_36FAA]
gi|262261291|gb|EEY79990.1| DNA translocase ftsK [Streptococcus sp. 2_1_36FAA]
Length = 767
Score = 36.0 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 21/172 (12%)
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-- 181
E + L+SFG + + + V I + V L + +I+
Sbjct: 22 ERQRAIKRMLLSFGLAFILLFAALKLGVFGVTIYNLIRLVVGSLAYLAIVATLIYLFFFK 81
Query: 182 -------IYATMLALFIGLIFVHLFLPAAKSKIMSILP--GVIFTWISWVVGAVLFTHYI 232
+ + +++F+GL+ ++ ++ + +L G + + + + L +
Sbjct: 82 WLSKREGLISGFISIFVGLLLIY------QAYFVDVLSLKGQVLSSTLARIFSDLTAFKV 135
Query: 233 VTFSTYSTMYAGLASIMTCL---VFLYMLGVFFIL-GAELNASMIIYYWRKK 280
+F+ + + L ++ L Y +G+ FIL GA L + IY +K
Sbjct: 136 SSFAGGGLLGSLLHLPISFLFSNFGSYFIGILFILVGALLISPWTIYDISEK 187
>gi|293191210|ref|ZP_06609143.1| putative membrane protein [Actinomyces odontolyticus F0309]
gi|292820631|gb|EFF79600.1| putative membrane protein [Actinomyces odontolyticus F0309]
Length = 570
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%)
Query: 168 PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
P + L + L + + +L K+K + GV+ + + A L
Sbjct: 300 PWIAQFLPSLLVILREGMEAILVVAAVLAYLAKAGHKNKAPIVWGGVVLAFGLSIGLAFL 359
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
F++ + G A++ + +++
Sbjct: 360 FSYVTSLAGANQELLEGFAALFAVAMLIWVSNWMI 394
>gi|46906702|ref|YP_013091.1| peptidase [Listeria monocytogenes serotype 4b str. F2365]
gi|47092518|ref|ZP_00230307.1| peptidase, putative [Listeria monocytogenes str. 4b H7858]
gi|226223079|ref|YP_002757186.1| hypothetical protein Lm4b_00475 [Listeria monocytogenes Clip81459]
gi|254825738|ref|ZP_05230739.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254993557|ref|ZP_05275747.1| hypothetical protein LmonocytoFSL_11606 [Listeria monocytogenes FSL
J2-064]
gi|255522239|ref|ZP_05389476.1| hypothetical protein LmonocFSL_13647 [Listeria monocytogenes FSL
J1-175]
gi|46879967|gb|AAT03268.1| putative peptidase [Listeria monocytogenes serotype 4b str. F2365]
gi|47019110|gb|EAL09854.1| peptidase, putative [Listeria monocytogenes str. 4b H7858]
gi|225875541|emb|CAS04244.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293594982|gb|EFG02743.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|328467746|gb|EGF38798.1| hypothetical protein LM1816_01837 [Listeria monocytogenes 1816]
Length = 719
Score = 36.0 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 8/122 (6%)
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
+ + +F+ L ++ F L L W L F + + +P
Sbjct: 5 LTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPLHIVM 64
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS-------IMTCLVFLYMLG 259
I+ + G+ + + G + + +TF+ + M +S ++ L+ L++L
Sbjct: 65 IIFVS-GIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLS 123
Query: 260 VF 261
Sbjct: 124 YI 125
>gi|149911221|ref|ZP_01899844.1| RND family efflux transporter [Moritella sp. PE36]
gi|149805675|gb|EDM65674.1| RND family efflux transporter [Moritella sp. PE36]
Length = 1100
Score = 36.0 bits (82), Expect = 6.7, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 4/98 (4%)
Query: 135 SFGYVLLASVTLVIMSFV---FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
S + L + LV+ V V + + + T +
Sbjct: 379 SINIISLFAFLLVLGIVVDDAIVVGESIYTEQAAGNKGVEGAIEGAYKVSKPITFAIITS 438
Query: 192 GLIFV-HLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
+ F+ LFLP + K+M ++P V+ T + + + LF
Sbjct: 439 VIAFMPLLFLPGPEGKLMQVIPVVVITTLLFSLFESLF 476
>gi|307110491|gb|EFN58727.1| hypothetical protein CHLNCDRAFT_56850 [Chlorella variabilis]
Length = 495
Score = 36.0 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 35/116 (30%), Gaps = 2/116 (1%)
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
VI + + P + + +G L + +G
Sbjct: 323 LVFIAVISAVTATKLNTGPECYLNLLPGQVCDFVYVSSGMCGLFALIVALGAFISLRSSA 382
Query: 202 AAKSKIMSILPGVI--FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ + + + G + FT W+V A+ FT Y + + L+++
Sbjct: 383 NSAAGFLPSIYGSLSLFTAFWWMVAAITFTKRGQQADDDGLEYGSARTTVIALLWI 438
>gi|154270786|ref|XP_001536247.1| hypothetical protein HCAG_08911 [Ajellomyces capsulatus NAm1]
gi|150409821|gb|EDN05261.1| hypothetical protein HCAG_08911 [Ajellomyces capsulatus NAm1]
Length = 575
Score = 36.0 bits (82), Expect = 6.9, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 95 TISALAAAYFSSNGVEALRISLNRA---YRVVEMRSW--YITRLISFGYVLLASVTLVIM 149
++S +AA++ + G+ A+ +L A Y V+E R + RLI F + A+ ++
Sbjct: 142 SVSQIAASWAIAPGIAAVFSALIFATVKYSVLERRDPLKWAMRLIPFYLSITAA---ILA 198
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL--FLPAAKSKI 207
F+ V +P +Y +G + I+ +A L + H + ++ K
Sbjct: 199 LFIIVELPGGQSYEE---FGVGKMCGIVLGVFFGFLAIAYTFFLPYFHRRLIVGDSRVKF 255
Query: 208 MSILPG 213
+ G
Sbjct: 256 YHVPLG 261
>gi|255559169|ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant, putative [Ricinus communis]
Length = 924
Score = 36.0 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 35/117 (29%), Gaps = 23/117 (19%)
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF-----LPAAK 204
S + V P+ ++ L +W +L + I H P K
Sbjct: 558 SGLVVVAPVKKLNSNEWA-FLRPFTPWMWAVTAIFFLLVGAVVWILEHRINDEFRGPPRK 616
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
I W + +F F+ + L M +++L+++ +
Sbjct: 617 Q----------VVTILWFSFSTMF------FAHRENTVSTLGR-MVLIIWLFVVLII 656
>gi|291280280|ref|YP_003497115.1| RND efflux system multidrug efflux transporter [Deferribacter
desulfuricans SSM1]
gi|290754982|dbj|BAI81359.1| RND efflux system, multidrug efflux transporter [Deferribacter
desulfuricans SSM1]
Length = 1028
Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 62/194 (31%), Gaps = 26/194 (13%)
Query: 53 LGAHQFVPTVIDVVFGAWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYF 104
+ + V I + P + K I +L GL + +L A +
Sbjct: 296 IEIAETVKKFIKEINNELPPGLYTDYVNDRSKIFAQRIDLLLRNAKLGLILVFSLLALFL 355
Query: 105 SSNGVEALRISLNRAYRVVEMRSWYITRL------ISFGYVLLASVTLVIMSFV---FVA 155
+R++ + S+ + L +S V L + + + V V
Sbjct: 356 ------EIRLAFWVMLGIPI--SFLGSMLLFPQFDVSINMVSLFAFIICLGIVVDDAIVV 407
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV-HLFLPAAKSKIMSILPGV 214
Y ++ P L+ + L + F+ F+P KI I+P +
Sbjct: 408 GENIYRYRQQGLPFKKAALIGGREVMVPVIFSVLTNMVAFLPMYFVPGVMGKIFRIIPVI 467
Query: 215 IFTWISWVVGAVLF 228
+ + + + LF
Sbjct: 468 VVSVFTISLLESLF 481
>gi|37221631|gb|AAQ76975.1| cannabinoid receptor 1 [Chaetodipus californicus]
Length = 302
Score = 35.6 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 113 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 169
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 170 VTXPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLKSVCSDIFPLIDETYLMFWIG--VTSV 227
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 228 LLLFIVYAYMYILWKAHSHAVRMIQRGT 255
>gi|167628063|ref|YP_001678563.1| hypothetical protein Fphi_1835 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167598064|gb|ABZ88062.1| hypothetical protein Fphi_1835 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 671
Score = 35.6 bits (81), Expect = 7.4, Method: Composition-based stats.
Identities = 13/130 (10%), Positives = 42/130 (32%), Gaps = 9/130 (6%)
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVA--IPLALAYVRKFFPALGNLLLIIWNGRI 182
++ +L+ F +LL ++ +++ + + A + + G W R
Sbjct: 10 NKNSINIQLLPFMLILLPVISAIVILISARSPNLQGLFAILERISGGFGFHSDYGWLWRA 69
Query: 183 YATMLALFIGLIFVHLFLPAAKSKI----MSILPGVIFTWIS---WVVGAVLFTHYIVTF 235
L + + L + + + + +F ++ + + + Y+
Sbjct: 70 TLFFPFLSVAYYIGYTMLKSQQQTFGVQALRLSIKALFIFVFSCFLLGVSWVIAVYVSKV 129
Query: 236 STYSTMYAGL 245
+ Y +
Sbjct: 130 MNFMNFYGNI 139
>gi|325675140|ref|ZP_08154826.1| arabinosyl transferase [Rhodococcus equi ATCC 33707]
gi|325554101|gb|EGD23777.1| arabinosyl transferase [Rhodococcus equi ATCC 33707]
Length = 1106
Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 33/226 (14%)
Query: 43 IVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA 102
IV L + + + T P IA + LA GL I+AL A
Sbjct: 392 IVAVGALLTWCSIERAIGT-----RRLLPAAIAALVGAF---TLAAAPTGLMCIAALLA- 442
Query: 103 YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV-----AIP 157
G+ + + R R ++ ++ ++ L+ V +F V
Sbjct: 443 -----GLRPITRLIVR--RRHQVGTFSQLLPLAAAGTLVLVVVFADQTFSTVMEATRVRT 495
Query: 158 LALAYVRKFFPALGNLLLIIWN-----GRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
+ + F L + R +A + L + +FL + +I +
Sbjct: 496 IIGPNLEWFQDYQRYYFLFVQTTDGSLARRFAFLTMLLCLFTVLFVFL--RRKRIPGVAA 553
Query: 213 GVIFTWISWVVGAVLF-----THYIVTFSTYSTMYAGLASIMTCLV 253
G + + V G + F T + F Y+ + LA++ +V
Sbjct: 554 GPSWRLMGIVFGTMFFMMFNPTKWTHHFGAYAGIAGSLAALTAVVV 599
>gi|182415952|ref|YP_001821018.1| putative phytochrome sensor protein [Opitutus terrae PB90-1]
gi|177843166|gb|ACB77418.1| putative phytochrome sensor protein [Opitutus terrae PB90-1]
Length = 821
Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 15/142 (10%), Positives = 45/142 (31%), Gaps = 32/142 (22%)
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R +++ + + + L + A+ L+ + +F P LG ++ +I+ +
Sbjct: 277 SRYLLAQLMVNTFFGVAVGLGLFFIGVPHAALWGLLSTLLRFIPFLGPIIAVIFPLALSV 336
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ PG ++ + W + + + +Y
Sbjct: 337 A------------------------VDPG--WSMLLWTAALYIVAELVTNNIIETLVYGS 370
Query: 245 LASI------MTCLVFLYMLGV 260
I + + + ++ G+
Sbjct: 371 STGISVLALLIAAVFWSWLWGM 392
>gi|37221641|gb|AAQ76980.1| cannabinoid receptor 1 [Erethizon dorsatum]
Length = 321
Score = 35.6 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 133 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 189
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 190 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKIQSVCSDIFPLIDETYLMFWIG--VTSV 247
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 248 LLLFIVYAYMYILWKAHSXXVRMIQRGT 275
>gi|254939860|gb|ACT88170.1| cannabinoid receptor 1 [Tupaia glis]
Length = 301
Score = 35.6 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 114 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVGSL-FLTAIDR--YISIHRPLAYKRI 170
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 171 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 228
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 229 LLLFIVYAYMYILWKAHSHAVRMIQRGT 256
>gi|319400027|gb|EFV88268.1| phage tail tape measure protein, TP901 family, core region
[Staphylococcus epidermidis FRI909]
Length = 1496
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 83/259 (32%), Gaps = 50/259 (19%)
Query: 36 LLSVF------PFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV--IAKPITDEILQVLA 87
+ S+F + GA + F+ A++ T + V A+ + A I V+
Sbjct: 583 IFSLFTNPIGIAILAIGALVTAFVVAYKKSETFRNFVDKAFEGIKKAANSFGKFIGPVIK 642
Query: 88 VPAKGLF----TISALAAAYFSSNGVEALRISLNRA--------------YRVVEMRSWY 129
GL +I +++ NG ++ N A Y V
Sbjct: 643 KSFNGLINLGKSIGNFLKGFWNENGNTIIQNLKNIATVISKIIKFIFSIFYLVFPKIKII 702
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL----LIIWNGRIYAT 185
+ + ++ ++ + V L +K F L + ++WN +
Sbjct: 703 VKTVFGSLVGIIKGFITIVSGLIKVFSGLFTGNWKKLFQGLKQIFKGAFQVLWNIIKISF 762
Query: 186 MLALFIGLI-FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-----STYS 239
+ GLI FV LF K+ W+ + F+ Y +
Sbjct: 763 FGLIVKGLISFVKLFTFKIKN--------------LWLKISSFFSQYTKNIYNSTVGRFK 808
Query: 240 TMYAGLASIMTCLVFLYML 258
+Y ++ I+ L+ +
Sbjct: 809 AIYNVISKIIVSLITFIIT 827
>gi|225311122|emb|CAQ56147.1| cannabinoid receptor 1 [Cynocephalus sp. DH-2008]
Length = 332
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 133 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVGSL-FLTAIDR--YISIHRPLAYKRI 189
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 190 VTRPKAVVAFCLMWTIAIVIAVLPLSGLDCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 247
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 248 LLLFIVYAYMYILWKAHSHAVRMIQRGT 275
>gi|15606387|ref|NP_213767.1| cation transporter E1-E2 family ATPase [Aquifex aeolicus VF5]
gi|2983590|gb|AAC07161.1| cation transporting ATPase (E1-E2 family) [Aquifex aeolicus VF5]
Length = 664
Score = 35.6 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 49/125 (39%), Gaps = 9/125 (7%)
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
A +T ++ V V P + + W + +T + ++ G F+ L
Sbjct: 32 ALITTILTVPVVVLSPSIQELIGIKVSFPYSN----WVILLLSTAVFIYGGTFFLKGMLE 87
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K K PG++ + A +++ Y F + L +++ +++ + + +
Sbjct: 88 ELKKK----NPGMMTLVGLAISVAYIYSVYTFFFGG-KEFFWELTTLIVVMLWGHYVEMK 142
Query: 262 FILGA 266
+LGA
Sbjct: 143 SVLGA 147
>gi|312137709|ref|YP_004005045.1| indolylacetylinositol arabinosyltransferase [Rhodococcus equi 103S]
gi|311887048|emb|CBH46357.1| putative indolylacetylinositol arabinosyltransferase [Rhodococcus
equi 103S]
Length = 1102
Score = 35.6 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 33/226 (14%)
Query: 43 IVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA 102
IV L + + + T P IA + LA GL I+AL A
Sbjct: 388 IVAVGALLTWCSIERAIGT-----RRLLPAAIAALVGAF---TLAAAPTGLMCIAALLA- 438
Query: 103 YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV-----AIP 157
G+ + + R R ++ ++ ++ L+ V +F V
Sbjct: 439 -----GLRPITRLIVR--RRHQVGTFSQLLPLAAAGTLVLVVVFADQTFSTVMEATRVRT 491
Query: 158 LALAYVRKFFPALGNLLLIIWN-----GRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
+ + F L + R +A + L + +FL + +I +
Sbjct: 492 IIGPNLEWFQDYQRYYFLFVQTTDGSLARRFAFLTMLLCLFTVLFVFL--RRKRIPGVAA 549
Query: 213 GVIFTWISWVVGAVLF-----THYIVTFSTYSTMYAGLASIMTCLV 253
G + + V G + F T + F Y+ + LA++ +V
Sbjct: 550 GPSWRLMGIVFGTMFFMMFNPTKWTHHFGAYAGIAGSLAALTAVVV 595
>gi|148985240|ref|ZP_01818463.1| ribonuclease BN, putative [Streptococcus pneumoniae SP3-BS71]
gi|147922438|gb|EDK73557.1| ribonuclease BN, putative [Streptococcus pneumoniae SP3-BS71]
Length = 66
Score = 35.6 bits (81), Expect = 8.0, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ LF+ Y+ + + L S+ + + + ++ ILGA +NASM
Sbjct: 1 MILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLK 59
>gi|225311098|emb|CAQ56135.1| cannabinoid receptor 1 [Bathyergus suillus]
Length = 361
Score = 35.6 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I + P LF + + A++ +S G +++R + R R+
Sbjct: 132 VYSFIDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 188
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 189 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 246
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 247 LLLFIVYAYMYILWKAHSHAVRMIQRGT 274
>gi|224367360|ref|YP_002601523.1| cobalt-zinc-cadmium resistance protein CzcA-like protein
[Desulfobacterium autotrophicum HRM2]
gi|223690076|gb|ACN13359.1| cobalt-zinc-cadmium resistance protein CzcA-like protein
[Desulfobacterium autotrophicum HRM2]
Length = 1047
Score = 35.6 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 63/184 (34%), Gaps = 14/184 (7%)
Query: 53 LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
L F T++ + A +++ + +L GL + L A + +
Sbjct: 308 LAVAAFNQTLLPGLGVAMVNDMSQTFKERGTLLLKNGYMGLGLVFILLALFL------DI 361
Query: 113 RISLNRAYRVVEM--RSWYITRLISFGYVLLASVTLVIMSFVFV-----AIPLALAYVRK 165
R++ + + ++ + L +F L++ ++ + V Y +
Sbjct: 362 RLAFWVSLGIPISLLGAFILLPLTNFSINLVSMFAFIVTIGIVVDDAIVVGENVYHYRQM 421
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFV-HLFLPAAKSKIMSILPGVIFTWISWVVG 224
F L + + + L + F+ +F+P K I+P V+ T +
Sbjct: 422 GFDFLESSIRGTREVAMPVVFSILTNVVAFLPIMFVPGTMGKFFKIIPVVVITVFMVSLA 481
Query: 225 AVLF 228
+F
Sbjct: 482 ESIF 485
>gi|33391750|gb|AAN78448.1| proton ATPase [Glomus mosseae]
Length = 942
Score = 35.6 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 3/117 (2%)
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
++ V + F +++ + L + F+ +F
Sbjct: 745 LIFLSLVLGTFLTGFSFAHFFIFRDVIGVTPEQLHTVMYLHISSAPHFL-IFATRLPGHF 803
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+P +F ++G +F I F S+ L +++ LV L +L +L
Sbjct: 804 WENIPSPLFVTS--IIGTQIFALLISVFGWLSSSINLLMAVIILLVSLGILSFSILL 858
>gi|325953704|ref|YP_004237364.1| heavy metal efflux pump, CzcA family [Weeksella virosa DSM 16922]
gi|323436322|gb|ADX66786.1| heavy metal efflux pump, CzcA family [Weeksella virosa DSM 16922]
Length = 1452
Score = 35.6 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 17/198 (8%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LL P + + + H F V+ V+ A P + +L+ +
Sbjct: 873 LLIAVPIALLLIFILLYFTFHSFKEAVL--VYTAIPMSAIGGVFALLLRDMPFSISAGVG 930
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
AL NG+ L + NR E + + R+I V +
Sbjct: 931 FIALFGV-AVLNGIV-LIATFNRL--EKEGWNEIVPRIIEGAKTRFRPVLMTASVASLGF 986
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL----PAAKSKIMSIL 211
+P+AL+ L ++ G I AT L LF+ + +F+ P +K +I
Sbjct: 987 LPMALS-TSAGAEVQKPLATVVIGGLISATALTLFVLPLLYLVFMRNQKPPKNNKTKAIA 1045
Query: 212 PGVIFTWISWVVGAVLFT 229
P + ++ + F+
Sbjct: 1046 P------VLFLFMFLGFS 1057
>gi|298386476|ref|ZP_06996032.1| ABC transporter permease [Bacteroides sp. 1_1_14]
gi|298260853|gb|EFI03721.1| ABC transporter permease [Bacteroides sp. 1_1_14]
Length = 561
Score = 35.6 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 3/94 (3%)
Query: 111 ALRISLNRAYRVVEMR--SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ S+ RA V R + +LI + L+ I L L Y +
Sbjct: 309 TVARSMERAREVGVRRVVGAFRKQLIHQFLFEALVMNLIAFILAVGLIELILPYFNQLVG 368
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + + + ++ +FI IF+ + PA
Sbjct: 369 RTVTFSVWLMDY-WWVLLVLVFIAGIFLSGYYPA 401
>gi|9789733|sp|Q9PUI7|CNR1_TARGR RecName: Full=Cannabinoid receptor 1; Short=CB-R; Short=CB1
gi|5917767|gb|AAD56029.1|AF181894_1 CB1 cannabinoid receptor [Taricha granulosa]
Length = 473
Score = 35.6 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 51/134 (38%), Gaps = 12/134 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + LF + + A++ +S G +++R + R R+
Sbjct: 173 VYSFLDFHVFHRKDSSNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 229
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ + +PL + FP + L+ W G ++
Sbjct: 230 VTRTKAVIAFCVMWTIAIIIAVLPLLGWNCKKLKSVCSDIFPLIDENYLMFWIG--VTSI 287
Query: 187 LALFIGLIFVHLFL 200
L LFI +V++
Sbjct: 288 LLLFIVYAYVYILW 301
>gi|332300131|ref|YP_004442052.1| NAD(P)(+) transhydrogenase (AB-specific) [Porphyromonas
asaccharolytica DSM 20707]
gi|332177194|gb|AEE12884.1| NAD(P)(+) transhydrogenase (AB-specific) [Porphyromonas
asaccharolytica DSM 20707]
Length = 857
Score = 35.6 bits (81), Expect = 8.3, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 9/106 (8%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+S Y L + L I+ + + +A + ++W AT L
Sbjct: 112 LFQLPVSNVYFTLVTAFLAIIIGMLTLVGSLVA--AGKLHRVLPQKSVVWPFHNVATSLT 169
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIF-TWISWVVGAVLFTHYIV 233
L + + F+ + + ++P + I ++ + LF Y
Sbjct: 170 LVVAVFFLLI------GTLNYVVPSALIYAMIGTMLFSALFGLYFS 209
>gi|110679698|ref|YP_682705.1| hypothetical protein RD1_2453 [Roseobacter denitrificans OCh 114]
gi|109455814|gb|ABG32019.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 335
Score = 35.6 bits (81), Expect = 8.3, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 20/128 (15%)
Query: 131 TRLISFGYVLLASVT-LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA- 188
R++++ L+A+V L V + + +A VR F +G+ + N +MLA
Sbjct: 51 QRVLAYWDGLIAAVPKLGAAIIVLLVTWVVVALVRAFIAKVGSKTRMRQNLIDVLSMLAS 110
Query: 189 ----LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L+ + + P +I PG T + A+ F TF +
Sbjct: 111 TGLWLMGMLVALAIVFP-------TITPGKALTTLGLGSVAIGFAF-KDTFENF------ 156
Query: 245 LASIMTCL 252
LA I+ L
Sbjct: 157 LAGILILL 164
>gi|288926796|ref|ZP_06420705.1| glutathione-regulated potassium-efflux system protein KefB
[Prevotella buccae D17]
gi|288336425|gb|EFC74802.1| glutathione-regulated potassium-efflux system protein KefB
[Prevotella buccae D17]
Length = 450
Score = 35.6 bits (81), Expect = 8.3, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 23/139 (16%)
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL+S V +++ + + V + L ++RK P W YA +
Sbjct: 114 WHRLLSAMAVNTFIYSILSAASIAVMFSIVLPFIRKLLPG--------WELHWYANAITG 165
Query: 190 FIGLIFVHLFL------PAAKSKIMSILPGV-------IFTWISWVVGAVLFTHYIVTFS 236
+ +I + FL + + +FT + V A+ F YI +
Sbjct: 166 ILTVIIIAPFLRAMVMKKNHSKEFRQLWVESNRNRLPLLFTILVRFVIAIAFVFYICNYL 225
Query: 237 TY--STMYAGLASIMTCLV 253
T + + + +I L+
Sbjct: 226 TRFQTAIMVSIGAITVLLM 244
>gi|227327139|ref|ZP_03831163.1| phosphoethanolamine transferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 559
Score = 35.6 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 20/130 (15%)
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
S L I +F+ I + F + G+ + + T LF + +
Sbjct: 12 LSFVLAIYIGLFLNISVYYRRFDYFSLSAGSQVPTFIPALVELTASILFTFFLM--RIIS 69
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT----------- 250
+ IL V+ +V ++Y+ TF Y +A++MT
Sbjct: 70 LGGRRFYRIL------ASLLVLISVAASYYM-TFFNVVIGYGIIAAVMTTDIDLSKEVIG 122
Query: 251 CLVFLYMLGV 260
FL+ML V
Sbjct: 123 FRFFLWMLAV 132
>gi|1513107|gb|AAB06958.1| P-type proton motive membrane ATPase [Pneumocystis carinii]
Length = 927
Score = 35.6 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 39/126 (30%), Gaps = 14/126 (11%)
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI---GLIFVHLFLPAAKSK 206
+ +V +AL+ + F L ++ +A+F L + P +
Sbjct: 689 MYAYVVYRIALSLHLEIFLGLWIVIFNHLMILELVVFIAIFADIATLAIAYDNAPYSLLP 748
Query: 207 IMSILP---------GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
LP G SW+ ++ + Y + ++M + L
Sbjct: 749 TKWNLPKLWGISLLLGAALAIGSWIALTTIYIN--DNTFGIVQGYGNVDAVMFLEISLTE 806
Query: 258 LGVFFI 263
+ FI
Sbjct: 807 NWLIFI 812
>gi|187935523|ref|YP_001887307.1| diguanylate cyclase (ggdef) domain protein [Clostridium botulinum B
str. Eklund 17B]
gi|187723676|gb|ACD24897.1| GGDEF domain protein [Clostridium botulinum B str. Eklund 17B]
Length = 571
Score = 35.6 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 82/245 (33%), Gaps = 18/245 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLS---ALLSVFPFIVFGANLAGFLGAHQ 57
M+ F + +DI I + + ++S I LL F +F F +H+
Sbjct: 157 MKSNFSLPYDIKAPIIGNKISIIHTLISSQILNYVIIFLLITFTLSIFVIATIAFYKSHK 216
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ ++ + A I I+Q+L L ++ ++ V + + N
Sbjct: 217 NIFHLLYIGIFALLSSIYAISETNIIQILIPNTYLLNNLTFMSLMLVGIPIVMIMIETTN 276
Query: 118 RAYRVVEMR-----------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
+ Y R ++ L++ +L L+I + + + Y+
Sbjct: 277 KKY----TRPLLITTYSMIINFIAQSLLTLFGILDLRSMLIISHILIMLSGILSLYIMIL 332
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
+ + I ++ I +I +L +P + I V W V
Sbjct: 333 SWHDRSFSSKCFTISIVPMIVGTSIDIILFYLHIPHYYGILFQIGVLVFIVIQLWYVINK 392
Query: 227 LFTHY 231
F++Y
Sbjct: 393 YFSYY 397
>gi|254932769|ref|ZP_05266128.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|293584322|gb|EFF96354.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|332310877|gb|EGJ23972.1| Transglutaminase-like superfamily protein [Listeria monocytogenes
str. Scott A]
Length = 719
Score = 35.6 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 8/122 (6%)
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
+ + +F+ L ++ F L L W L F + + +P
Sbjct: 5 LTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPLHIVM 64
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS-------IMTCLVFLYMLG 259
I+ + G+ + + G + + +TF+ + M +S ++ L+ L++L
Sbjct: 65 IIFVS-GIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLS 123
Query: 260 VF 261
Sbjct: 124 YI 125
>gi|254854341|ref|ZP_05243689.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300766261|ref|ZP_07076223.1| peptidase [Listeria monocytogenes FSL N1-017]
gi|258607740|gb|EEW20348.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|300513026|gb|EFK40111.1| peptidase [Listeria monocytogenes FSL N1-017]
Length = 719
Score = 35.6 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 8/122 (6%)
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
+ + +F+ L ++ F L L W L F + + +P
Sbjct: 5 LTLVMLFILSVLLISEWIYPFAELTELSKANWIILFITLSLGSFFLRLKYYWTIPLHIVM 64
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS-------IMTCLVFLYMLG 259
I+ + G+ + + G + + +TF+ + M +S ++ L+ L++L
Sbjct: 65 IIFVS-GIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLS 123
Query: 260 VF 261
Sbjct: 124 YI 125
>gi|171682814|ref|XP_001906350.1| hypothetical protein [Podospora anserina S mat+]
gi|170941366|emb|CAP67016.1| unnamed protein product [Podospora anserina S mat+]
Length = 414
Score = 35.6 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 17/129 (13%)
Query: 85 VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV 144
++ T+ + A Y + G+ A ++ + + V
Sbjct: 62 IVFSQLWNFVTVGFIFAMYSAGMGIHADKVPMEKI----------------VLMAKFLVV 105
Query: 145 TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK 204
++ +F V +A+ ++ + W + + I +F+ + +P K
Sbjct: 106 AEILYAFNLVFTKMAILFMYYRIFRFPFFKKMAWGISAFIIAWVITITFLFIFICVPVEK 165
Query: 205 SKIMSILPG 213
LPG
Sbjct: 166 L-WYPHLPG 173
>gi|332652346|ref|ZP_08418091.1| putative transporter, solute:sodium symporter (SSS) family
[Ruminococcaceae bacterium D16]
gi|332517492|gb|EGJ47095.1| putative transporter, solute:sodium symporter (SSS) family
[Ruminococcaceae bacterium D16]
Length = 496
Score = 35.6 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM---RSWYITR 132
+ I + Q L G F + + A ++N + L I+ + +Y VV R R
Sbjct: 325 EVIIRLLNQELYTGWSGFFLFAIIGACVSTANS-QLLLIASSFSYDVVRTAAPRPISEQR 383
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--------FFPALGNLLLIIWNGRI-- 182
+++ G + + + M L+Y FP++ LL W +
Sbjct: 384 VLTLGRLAVFGGGTISMLMALNPPDFTLSYGGDVWGAVSILLFPSMYGTLLCRWVTKRGV 443
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
+A +L ++ ++ A + I LPGV + + V ++L
Sbjct: 444 WACILVGAAAILVLYPLYYAGRLGIHPALPGVFISTAAMAVVSLL 488
>gi|261200265|ref|XP_002626533.1| chromosome condensation protein [Ajellomyces dermatitidis SLH14081]
gi|239593605|gb|EEQ76186.1| chromosome condensation protein [Ajellomyces dermatitidis SLH14081]
Length = 578
Score = 35.6 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 137 GYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-----IYATMLALF 190
GY +A + ++I + +A + +++ F ++ +++ R I + +
Sbjct: 346 GYSFMAVLAIIIYTLSLSIAALILGSHLAIFMDEYTPVIPYVFSRRCLDPIISFLAIGCW 405
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+G +F+ ++ P + G + + L Y+
Sbjct: 406 LGAVFLAIWPPDRDLGVHEHWRGSAVFTVVFAPLGCLLRFYVS 448
>gi|237744299|ref|ZP_04574780.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|260494118|ref|ZP_05814249.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
gi|229431528|gb|EEO41740.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|260198264|gb|EEW95780.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
Length = 292
Score = 35.6 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 53/162 (32%), Gaps = 28/162 (17%)
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N+ V L + G +L+ + ++++ V + +P Y FF L +
Sbjct: 112 NKVNDFVNNVPEGKENLFAIGGGILSILNTLLLAVVTIKLPFFGNYSIGFFKGLSGIAD- 170
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
A S+ + I G++F + F Y
Sbjct: 171 ---------------------YIKEAKNSQFILIFSGILF------LAMAGFLIYSAFIK 203
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + + L+ Y++ + ELN + + Y++
Sbjct: 204 NKNFLKYSIFGNIALLIIFYIVLYVKLPSGELNKYISVSYFK 245
>gi|239607516|gb|EEQ84503.1| chromosome condensation protein [Ajellomyces dermatitidis ER-3]
Length = 578
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 137 GYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-----IYATMLALF 190
GY +A + ++I + +A + +++ F ++ +++ R I + +
Sbjct: 346 GYSFMAVLAIIIYTLSLSIAALILGSHLAIFMDEYTPVIPYVFSRRCLDPIISFLAIGCW 405
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+G +F+ ++ P + G + + L Y+
Sbjct: 406 LGAVFLAIWPPDRDLGVHEHWRGSAVFTVVFAPLGCLLRFYVS 448
>gi|124009682|ref|ZP_01694353.1| serine/threonine protein kinases [Microscilla marina ATCC 23134]
gi|123984286|gb|EAY24630.1| serine/threonine protein kinases [Microscilla marina ATCC 23134]
Length = 743
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 20/154 (12%)
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L Y+L A + F A Y+ P +GN L + L
Sbjct: 203 FIYFSLRVGSYLLYAVFIALGTLFSSAINGHAFQYLWGNMPIVGNYSLNFVGALFHLFFL 262
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
I + + +LP ++ + ++ G + I + ++ + + + +
Sbjct: 263 LYAISFLEIKKYLPRWRNVLHGLIGGAVILAI-ISLVSIPLSI------KFLAILGVVNM 315
Query: 248 IMTCLV-------------FLYMLGVFFILGAEL 268
+ L+ F + V FI+G L
Sbjct: 316 PLVILLSVKCYRKGLIAARFFILAWVVFIVGVVL 349
>gi|12699726|gb|AAG37724.1| cannabinoid receptor 1 [Choloepus didactylus]
Length = 330
Score = 35.6 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 119 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 175
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G T+
Sbjct: 176 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTTV 233
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 234 LLLFIVYAYMYILWKAHSHAVRMIQRGT 261
>gi|327352508|gb|EGE81365.1| chromosome condensation protein [Ajellomyces dermatitidis ATCC
18188]
Length = 578
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 137 GYVLLASVTLVI-MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-----IYATMLALF 190
GY +A + ++I + +A + +++ F ++ +++ R I + +
Sbjct: 346 GYSFMAVLAIIIYTLSLSIAALILGSHLAIFMDEYTPVIPYVFSRRCLDPIISFLAIGCW 405
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+G +F+ ++ P + G + + L Y+
Sbjct: 406 LGAVFLAIWPPDRDLGVHEHWRGSAVFTVVFAPLGCLLRFYVS 448
>gi|228911772|ref|ZP_04075541.1| Sulfate transporter [Bacillus thuringiensis IBL 200]
gi|228847864|gb|EEM92749.1| Sulfate transporter [Bacillus thuringiensis IBL 200]
Length = 587
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 12/116 (10%)
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I R ++ G+ +V + + F L + I Y+ + A
Sbjct: 118 FIPRPVTIGFTSGIAVIIFTGQIASFLGLTGIKKHEAFIANLKEISTHIGTTNFYSVVTA 177
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L I + KI LPG + + V A +F FS +
Sbjct: 178 LICFFIIL------ITPKIFPKLPGSLVGIVISTVIATIF------FSGHVPTIGS 221
>gi|194678587|ref|XP_001787717.1| PREDICTED: ATP-binding cassette transporter sub-family A member
16-like [Bos taurus]
Length = 1231
Score = 35.6 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 26/184 (14%)
Query: 108 GVEALRISLNRA---YRVVEMR------SWYITRLISFGY----VLLASVTLVIMSFVFV 154
G A++ +L++A Y R S + R Y +LL + + + + F+ +
Sbjct: 215 GFLAIQHALDKAIILYHESSARQLFDDISILVQRFPYPAYPDDGLLLLTGSFLPLMFILM 274
Query: 155 AIPLALAYVRKFF-------------PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
P L+ +R L + ++ + + +I V LF+
Sbjct: 275 FSPTVLSIIRSIVWEKEKRLKEYQLTIGLKSWMIWAAYFFTFFFFYIFIVSMICVLLFIF 334
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
S + + + + ++ F + TF + + A S + + F +
Sbjct: 335 NDPVFYYSDYSFIFVFLMCYAIASIFFGFMVSTFFNKARLAASAGSFIYFVSFFPFNSIA 394
Query: 262 FILG 265
G
Sbjct: 395 QYYG 398
>gi|307701759|ref|ZP_07638773.1| FTR1 family protein [Mobiluncus mulieris FB024-16]
gi|307613017|gb|EFN92272.1| FTR1 family protein [Mobiluncus mulieris FB024-16]
Length = 525
Score = 35.6 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 34/96 (35%), Gaps = 2/96 (2%)
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
G + L I + +L + ++ ++ G++ + AVLF
Sbjct: 240 GWGGFVSSFIVLLREGAEALLVIAAVITYLMKAKRRDQLPGVIVGIVLALLVSAGLAVLF 299
Query: 229 THYIVTFSTYST--MYAGLASIMTCLVFLYMLGVFF 262
+ + +T + + G+ I L+ +Y+
Sbjct: 300 SILTASTATGLSQELIEGITGIAAVLMLIYVSNWIL 335
>gi|269976555|ref|ZP_06183540.1| iron permease FTR1 [Mobiluncus mulieris 28-1]
gi|269935356|gb|EEZ91905.1| iron permease FTR1 [Mobiluncus mulieris 28-1]
Length = 525
Score = 35.6 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 34/96 (35%), Gaps = 2/96 (2%)
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
G + L I + +L + ++ ++ G++ + AVLF
Sbjct: 240 GWGGFVSSFIVLLREGAEALLVIAAVITYLMKAKRRDQLPGVIVGIVLALLVSAGLAVLF 299
Query: 229 THYIVTFSTYST--MYAGLASIMTCLVFLYMLGVFF 262
+ + +T + + G+ I L+ +Y+
Sbjct: 300 SILTASTATGLSQELIEGITGIAAVLMLIYVSNWIL 335
>gi|241954374|ref|XP_002419908.1| endomembrane protein, putative [Candida dubliniensis CD36]
gi|223643249|emb|CAX42123.1| endomembrane protein, putative [Candida dubliniensis CD36]
Length = 630
Score = 35.6 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 68/181 (37%), Gaps = 21/181 (11%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
+ + + S + ++ + N+ R + + WY+ + I F
Sbjct: 450 IPLGVIGSILASKKPLLSVPVRTNQIPRQIPTQPWYLR-------TIPVMFISGIFPFGS 502
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
+A+ + Y +F + + ++ I + + I ++ ++ L + K
Sbjct: 503 IAVEMYFIYSSIWFNKIFYMFGFLFFCFILMILTSSLITILMIYYTLCSENYKWQWK--- 559
Query: 214 VIFTWISWVVGAVLFTHYIV---TFSTYS--TMYAGLASIMTCLVFL------YMLGVFF 262
IF + + + ++ F +S +Y G +++++ LVFL ++ + F
Sbjct: 560 SIFVGGGCAIYVFIHSFFLTGGEKFGGFSSLVLYTGYSAVISLLVFLCCGSIGFISSLIF 619
Query: 263 I 263
+
Sbjct: 620 V 620
>gi|126334342|ref|XP_001377157.1| PREDICTED: similar to ABC-C transporter [Monodelphis domestica]
Length = 1709
Score = 35.6 bits (81), Expect = 9.1, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 47/136 (34%), Gaps = 10/136 (7%)
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++L +L ++ + V + ++++ +G ++W+
Sbjct: 254 NFLKFLDQVLPLIILLLYSLNVLMIIRVIVQEKEKQLKEYLQMMGLSNWLLWSSYFITFF 313
Query: 187 LALFIGLIFVHLFL-------PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ I + + LF P S+ V + + + ++ F I TF +
Sbjct: 314 FSFLITICLLTLFFFMQVFDQPIIYHSDSSL---VFIFLLCFALSSMFFGFMISTFFNKA 370
Query: 240 TMYAGLASIMTCLVFL 255
M + + +L
Sbjct: 371 NMAVATGGCIYFITYL 386
>gi|256027969|ref|ZP_05441803.1| hypothetical protein PrD11_08226 [Fusobacterium sp. D11]
gi|289765915|ref|ZP_06525293.1| conserved hypothetical protein [Fusobacterium sp. D11]
gi|289717470|gb|EFD81482.1| conserved hypothetical protein [Fusobacterium sp. D11]
Length = 292
Score = 35.6 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 53/162 (32%), Gaps = 28/162 (17%)
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N+ V L + G +L+ + ++++ V + +P Y FF L +
Sbjct: 112 NKVNDFVNNVPEGKENLFAIGGGILSILNTLLLAVVTIKLPFFGNYSIGFFKGLSGIAD- 170
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
A S+ + I G++F + F Y
Sbjct: 171 ---------------------YIKEAKNSQFILIFSGILF------LAMAGFLIYSAFIK 203
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + + L+ Y++ + ELN + + Y++
Sbjct: 204 NKNFLKYSIFGNIALLIIFYIVLYVKLPSGELNKYISVSYFK 245
>gi|163788156|ref|ZP_02182602.1| cell division protein [Flavobacteriales bacterium ALC-1]
gi|159876476|gb|EDP70534.1| cell division protein [Flavobacteriales bacterium ALC-1]
Length = 806
Score = 35.6 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 20/130 (15%)
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-----------ALGNLLLIIWN 179
+LI +++ V L I FV V FP LG + +
Sbjct: 32 QKLIFGSLLIILGVLLFISFLSFVFTGKEDQSVLSTFPDRSVEYKNWASQLGAKVSEFFI 91
Query: 180 GRIYATMLALFIGLIFV---HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + +F GLIF+ ++ L K+K+ I+ + + ++LF +
Sbjct: 92 IKGFGIPSFIFSGLIFLSGVYVTLNLKKAKLRKHW---IWGTLIIIWLSILFGFFTH--- 145
Query: 237 TYSTMYAGLA 246
Y + +
Sbjct: 146 KYDLLGGTIG 155
>gi|312072736|ref|XP_003139201.1| VANG-1 protein [Loa loa]
gi|307765633|gb|EFO24867.1| VANG-1 protein [Loa loa]
Length = 520
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 53/143 (37%), Gaps = 15/143 (10%)
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL--GNLLLIIWNGRIYATMLA 188
+R+ L S +I + VA+P+ L V +P + G + + T+L
Sbjct: 96 SRIFWLLSASLVSFLAIISPSLMVALPIILYQVGFGWPEVLCGADCQGLLLNLVVKTLLL 155
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF--------STYST 240
L A ++ ++++ +LF ++ S+Y+
Sbjct: 156 LGALWAMYFRHASADMPRLFF-----HRAALAFLALFILFAFWLFYSVRILFEKESSYNV 210
Query: 241 MYAGLASIMTCLVFLYMLGVFFI 263
+ S++ +++L+ + V +
Sbjct: 211 IVGFALSLLDAMLYLHYITVILL 233
>gi|146309845|ref|YP_001174919.1| phosphoethanolamine transferase [Enterobacter sp. 638]
gi|145316721|gb|ABP58868.1| phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine
transferase [Enterobacter sp. 638]
Length = 563
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 11/108 (10%)
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
S L + +F+ + + + + T+L F L + LF
Sbjct: 12 LSFLLALYIGLFMNGAVFFRRFDGYAQDFTVWKGVSAVVELVGTVLVTFFLLRMLSLFG- 70
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + + VV + ++Y+ TF Y +AS+M
Sbjct: 71 --RRMWR------VLASLV-VVFSAGASYYM-TFMNVVIGYGIIASVM 108
>gi|71279659|ref|YP_266836.1| sensory box sensor histidine kinase/response regulator [Colwellia
psychrerythraea 34H]
gi|71145399|gb|AAZ25872.1| sensory box sensor histidine kinase/response regulator [Colwellia
psychrerythraea 34H]
Length = 1156
Score = 35.6 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 72/236 (30%), Gaps = 49/236 (20%)
Query: 39 VFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA 98
VFP + + F + + ++ P ++ L +
Sbjct: 277 VFPIYIL---IFAFFAVPLGLAGQM-LLGNTVPSDTYVLFLPDV-----TQQTWLTLFAF 327
Query: 99 LAAAYFSSNGV------EALRISLNRAYRVVEMR--------SWYITRLISFGYVLLASV 144
L A +S+ V + +S + ++ R + RL++ +L V
Sbjct: 328 LGAVSAASSMVIISSIALSTMLSNEIVFPLLYRRQKVAQTDYDNFRKRLLNIRKLLALFV 387
Query: 145 TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK 204
L+ +A P L+ + + + L LI + +
Sbjct: 388 ILLGYGVFIMASPDTLSSLGEVA---------------FGAFAQLTPALIAAFYW---RR 429
Query: 205 SKIMSILPGVIFTWISWVVGAVL--FTHYIVTFS------TYSTMYAGLASIMTCL 252
+ +M + G++ +I W+ L F Y F+ + L + + +
Sbjct: 430 ASLMGVYAGILVGFILWLTLNFLPQFGLYASPFAEGFLPVKTTATLFSLGANIIVM 485
>gi|71065345|ref|YP_264072.1| competence protein, ComEC [Psychrobacter arcticus 273-4]
gi|71038330|gb|AAZ18638.1| possible competence protein, ComEC [Psychrobacter arcticus 273-4]
Length = 986
Score = 35.2 bits (80), Expect = 9.4, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I+ L++ + + +V+ V + I + ++ P W+ R + + A
Sbjct: 376 ISHLLAISGTHVLFLAIVLAGIVILFINRLYPALYRYIP--------RWHVRWWLMISAA 427
Query: 190 FIGLIFVHLFLPAAKSKIMSILPG 213
FI +F +PAA++ M + G
Sbjct: 428 FIYALFTGFDVPAARTAWMLLAIG 451
>gi|254386648|ref|ZP_05001944.1| integral membrane protein [Streptomyces sp. Mg1]
gi|194345489|gb|EDX26455.1| integral membrane protein [Streptomyces sp. Mg1]
Length = 260
Score = 35.2 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 93/268 (34%), Gaps = 37/268 (13%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
H E D W A + L++ P ++ + + ++ P
Sbjct: 16 HVRELDLWQRALGFAALGFLTLVPLLIVVSA-----ADAADGRGFAQWLGDGL--GVSAP 68
Query: 78 ITDEILQVLAVPAKGLFTISA----LAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
EI ++ A+P + T +A L + S G L+ + + + R W R
Sbjct: 69 ARLEIERLFALPGQAWRTTTAFGLALLTVFGLSFGTM-LQSGYEQVWDLPPARWWARWR- 126
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ L +V + ++ ++ P + VR L L W+ R+
Sbjct: 127 ----HALWLAVLIGVLYLAGISPPWRDSTVRGVVTVLIGTLFFWWSQRLLL--------- 173
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYAGLASIMTC 251
A + ++ PG T + ++G +F+ + + ++ + Y +++
Sbjct: 174 --------AGRVGWTALFPGAAATMLG-LLGLRIFSRLVFSPLIASSAVTYGPFGTVLVL 224
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+L +GV GA + + R+
Sbjct: 225 QSWLVAIGVVVFGGALVGRLLHEELRRR 252
>gi|256847007|ref|ZP_05552453.1| competence protein [Lactobacillus coleohominis 101-4-CHN]
gi|256715671|gb|EEU30646.1| competence protein [Lactobacillus coleohominis 101-4-CHN]
Length = 724
Score = 35.2 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAY------FSSNGVE 110
Q +P + + + +I IT IL L L + + + +
Sbjct: 273 QLIPRLRHLDSWSLSLIIQLVITPGILLNLGGRLSYLLSFTLQRIKWQSKLHQTIGMTIV 332
Query: 111 ALRISLNRAYRVVEMR---SWYITRLISFGYV-LLASVTLV--IMSFVFVAIPLALAYVR 164
+L + LN Y+V + +W + L S L+ L+ + V + L Y +
Sbjct: 333 SLPVILNATYQVHLLTIVINWLMIPLFSLVITPLVLICALMGKVCPLVVLMGNGGLLYFQ 392
Query: 165 KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
+ L NL + G++ + I + + + + I+ + W
Sbjct: 393 RVIQWLANLPGTLVFGKLNTALTFWLIISSILAIAGVKRRKLLRWIIILTYASTFIWY 450
>gi|300716834|ref|YP_003741637.1| phosphoethanolamine transferase [Erwinia billingiae Eb661]
gi|299062670|emb|CAX59790.1| Phosphoethanolamine transferase [Erwinia billingiae Eb661]
Length = 552
Score = 35.2 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
+++ I L L + F L + ++ + A + + + + + + +
Sbjct: 15 FIALYIGILLNLPIFFRRFHQLQHDAILSTGIELVAAFMLVLFTTLLLSMTG-----RWL 69
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I T + VV +V ++Y++ F Y +AS+M
Sbjct: 70 FR----ILTTLL-VVFSVAASYYMI-FFNVDIGYGIIASVMA 105
>gi|294827566|ref|NP_710251.2| hypothetical protein LA_0070 [Leptospira interrogans serovar Lai
str. 56601]
gi|293385409|gb|AAN47269.2| hypothetical protein LA_0070 [Leptospira interrogans serovar Lai
str. 56601]
Length = 987
Score = 35.2 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 35/97 (36%)
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ + Y+ + ++ + + + V G + I+ I
Sbjct: 83 NFLAIPIWRIIYLKGKTRWIIFAFLMSFLVGGTVPVVANLLSRDGYIERSIYLTSIVLLF 142
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
+A F ++ ++L K+ M + G+ F + ++
Sbjct: 143 MAAFFIILILYLNFSVEKTSFMLKIVGITFVTVLTIM 179
>gi|156060765|ref|XP_001596305.1| hypothetical protein SS1G_02525 [Sclerotinia sclerotiorum 1980]
gi|154699929|gb|EDN99667.1| hypothetical protein SS1G_02525 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1074
Score = 35.2 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 49/141 (34%), Gaps = 28/141 (19%)
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVF---VAIPLALAYVRKFFPALGNLLL--- 175
V E +++ LI + L A+ + + VF L + V F LLL
Sbjct: 926 VAEAPNFFKFLLILVLFNLAAAAICLFLGIVFKDNGVASLIGSLVMLFSLLFAGLLLNHD 985
Query: 176 IIWNGRIYATMLALF-------IGLIFVHLFLPAAKSKIMSILPGVIF-------TWISW 221
I ++ L++F I +L L K K+ +PG + T W
Sbjct: 986 AIPKSALWLQSLSIFHYGFESLIVNEVTYLTLVDQKYKLDITVPGAVILSSFGFDTQAFW 1045
Query: 222 --------VVGAVLFTHYIVT 234
V G+ +F Y+
Sbjct: 1046 PDAINLAIVAGSFIFLAYVAM 1066
>gi|37221659|gb|AAQ76989.1| cannabinoid receptor 1 [Tamiasciurus hudsonicus]
Length = 364
Score = 35.2 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 134 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 190
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 191 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 248
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 249 LLLFIVYAYMYILWKAHSHAVRMIQRGT 276
>gi|12699762|gb|AAG37742.1| cannabinoid receptor 1 [Pedetes capensis]
Length = 330
Score = 35.2 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ + + P LF + + A++ +S G +++R + R R+
Sbjct: 119 VYSFVDFHVFHRKDSPNVFLFKLGGVTASFTASVG-SLFLTAIDR--YISIHRPLAYKRI 175
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPL-------ALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ ++A + ++ V +PL + FP + L+ W G ++
Sbjct: 176 VTRPKAVVAFCLMWTIAIVIAVLPLLGWNCKKLQSVCSDIFPLIDETYLMFWIG--VTSV 233
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGV 214
L LFI ++++ A + I G
Sbjct: 234 LLLFIVYAYMYILWKAHSHAVRMIQRGT 261
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.315 0.157 0.434
Lambda K H
0.267 0.0481 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,313,957,125
Number of Sequences: 14124377
Number of extensions: 236398138
Number of successful extensions: 2699402
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 4724
Number of HSP's successfully gapped in prelim test: 43722
Number of HSP's that attempted gapping in prelim test: 2630558
Number of HSP's gapped (non-prelim): 96245
length of query: 281
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 144
effective length of database: 2,907,753,981
effective search space: 418716573264
effective search space used: 418716573264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (20.4 bits)
S2: 81 (35.6 bits)